Query psy2240
Match_columns 182
No_of_seqs 161 out of 1177
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 19:46:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 99.9 1.1E-21 3.9E-26 150.7 12.9 162 19-180 32-215 (584)
2 3oz2_A Digeranylgeranylglycero 99.8 5.3E-21 1.8E-25 140.5 8.0 149 20-180 2-160 (397)
3 3i3l_A Alkylhalidase CMLS; fla 99.8 1E-18 3.5E-23 134.2 8.9 152 18-180 19-186 (591)
4 3nix_A Flavoprotein/dehydrogen 99.8 1.4E-18 4.9E-23 128.8 8.6 147 21-180 4-164 (421)
5 3cgv_A Geranylgeranyl reductas 99.8 4.6E-18 1.6E-22 125.1 9.7 148 21-180 3-160 (397)
6 2qa1_A PGAE, polyketide oxygen 99.7 1.1E-17 3.9E-22 126.5 11.6 147 18-180 7-163 (500)
7 3e1t_A Halogenase; flavoprotei 99.7 3.6E-18 1.2E-22 129.7 8.9 149 21-180 6-170 (512)
8 3fmw_A Oxygenase; mithramycin, 99.7 2.6E-17 9.1E-22 126.1 13.5 146 21-180 48-205 (570)
9 2qa2_A CABE, polyketide oxygen 99.7 3.1E-17 1.1E-21 124.1 11.8 145 20-180 10-164 (499)
10 3ihg_A RDME; flavoenzyme, anth 99.7 8.4E-18 2.9E-22 128.3 6.5 144 21-180 4-181 (535)
11 3rp8_A Flavoprotein monooxygen 99.7 3.9E-18 1.3E-22 126.1 2.6 146 20-180 21-179 (407)
12 3dme_A Conserved exported prot 99.7 5.3E-16 1.8E-20 112.9 13.3 56 125-180 144-207 (369)
13 3v76_A Flavoprotein; structura 99.7 7E-17 2.4E-21 119.5 8.4 147 20-180 25-185 (417)
14 2gqf_A Hypothetical protein HI 99.7 2.2E-16 7.6E-21 116.4 9.2 126 20-160 2-138 (401)
15 3atr_A Conserved archaeal prot 99.7 2.1E-17 7.1E-22 123.8 3.8 143 21-180 5-160 (453)
16 4at0_A 3-ketosteroid-delta4-5a 99.7 6.6E-16 2.3E-20 117.2 11.8 44 19-68 38-81 (510)
17 2r0c_A REBC; flavin adenine di 99.7 2.8E-16 9.7E-21 120.2 8.8 150 21-180 25-194 (549)
18 2i0z_A NAD(FAD)-utilizing dehy 99.7 5.3E-16 1.8E-20 116.0 10.0 145 21-180 25-189 (447)
19 1ryi_A Glycine oxidase; flavop 99.7 1.4E-15 4.7E-20 111.4 11.9 156 19-180 14-217 (382)
20 2oln_A NIKD protein; flavoprot 99.6 2.7E-15 9.1E-20 110.5 12.9 153 21-180 3-206 (397)
21 1qo8_A Flavocytochrome C3 fuma 99.6 4.1E-15 1.4E-19 114.2 14.3 140 21-167 120-286 (566)
22 2x3n_A Probable FAD-dependent 99.6 6.3E-17 2.2E-21 119.3 3.9 147 22-180 6-164 (399)
23 1y56_B Sarcosine oxidase; dehy 99.6 3.9E-15 1.3E-19 109.0 13.3 153 21-180 4-203 (382)
24 2gag_B Heterotetrameric sarcos 99.6 1.3E-14 4.6E-19 106.9 16.2 173 1-180 1-228 (405)
25 3alj_A 2-methyl-3-hydroxypyrid 99.6 1.3E-15 4.3E-20 111.7 10.2 140 21-180 10-158 (379)
26 3dje_A Fructosyl amine: oxygen 99.6 5.1E-15 1.7E-19 110.4 13.6 154 20-180 4-219 (438)
27 3pvc_A TRNA 5-methylaminomethy 99.6 9.4E-15 3.2E-19 114.5 14.7 154 21-180 263-467 (689)
28 3nlc_A Uncharacterized protein 99.6 1.5E-14 5.3E-19 110.0 15.4 150 20-180 105-275 (549)
29 3ps9_A TRNA 5-methylaminomethy 99.6 2E-14 6.7E-19 112.5 16.3 154 21-180 271-471 (676)
30 1y0p_A Fumarate reductase flav 99.6 2.4E-14 8.1E-19 110.1 15.9 139 22-167 126-291 (571)
31 2gf3_A MSOX, monomeric sarcosi 99.6 1.3E-14 4.4E-19 106.5 13.8 152 22-180 3-203 (389)
32 3nyc_A D-arginine dehydrogenas 99.6 8.9E-15 3.1E-19 106.9 12.5 153 20-180 7-207 (381)
33 4hb9_A Similarities with proba 99.6 6.3E-15 2.1E-19 108.7 11.5 145 24-180 3-164 (412)
34 4a9w_A Monooxygenase; baeyer-v 99.6 4.6E-15 1.6E-19 107.4 10.6 124 21-180 2-130 (357)
35 2uzz_A N-methyl-L-tryptophan o 99.6 1.1E-14 3.6E-19 106.3 12.6 153 22-180 2-202 (372)
36 1k0i_A P-hydroxybenzoate hydro 99.6 1.9E-16 6.6E-21 116.5 3.2 144 22-180 2-161 (394)
37 2xdo_A TETX2 protein; tetracyc 99.6 1.6E-15 5.4E-20 111.8 7.6 144 20-180 24-180 (398)
38 2vou_A 2,6-dihydroxypyridine h 99.6 2.9E-15 9.8E-20 110.4 8.8 140 21-180 4-151 (397)
39 3c96_A Flavin-containing monoo 99.6 2.7E-15 9.3E-20 111.0 8.6 146 20-180 2-167 (410)
40 3jsk_A Cypbp37 protein; octame 99.6 1.7E-14 5.8E-19 103.3 12.0 111 21-161 78-191 (344)
41 2bry_A NEDD9 interacting prote 99.6 3.9E-14 1.3E-18 107.1 14.3 123 21-180 91-228 (497)
42 2dkh_A 3-hydroxybenzoate hydro 99.6 1.7E-14 5.8E-19 112.2 12.2 154 18-180 28-209 (639)
43 2wdq_A Succinate dehydrogenase 99.6 6.5E-14 2.2E-18 107.8 14.9 142 20-168 5-180 (588)
44 2weu_A Tryptophan 5-halogenase 99.6 3.4E-14 1.1E-18 107.9 12.2 55 125-180 167-228 (511)
45 1rp0_A ARA6, thiazole biosynth 99.6 3.7E-14 1.3E-18 100.1 11.6 109 21-161 38-150 (284)
46 2gjc_A Thiazole biosynthetic e 99.6 4.2E-14 1.4E-18 100.7 11.6 117 22-168 65-189 (326)
47 3c4n_A Uncharacterized protein 99.6 5.3E-15 1.8E-19 109.3 7.1 152 22-180 36-234 (405)
48 2aqj_A Tryptophan halogenase, 99.6 5.1E-14 1.7E-18 107.6 12.4 56 124-180 158-220 (538)
49 1pj5_A N,N-dimethylglycine oxi 99.6 5.9E-14 2E-18 112.1 13.2 153 21-180 3-205 (830)
50 3da1_A Glycerol-3-phosphate de 99.6 2.2E-14 7.7E-19 109.9 10.1 42 21-68 17-58 (561)
51 2pyx_A Tryptophan halogenase; 99.6 1.7E-13 5.7E-18 104.4 14.7 55 125-180 169-231 (526)
52 2h88_A Succinate dehydrogenase 99.5 1.7E-13 5.6E-18 105.9 14.0 143 18-168 14-191 (621)
53 2qcu_A Aerobic glycerol-3-phos 99.5 1.9E-13 6.4E-18 103.6 14.0 41 21-67 2-42 (501)
54 1pn0_A Phenol 2-monooxygenase; 99.5 7.6E-15 2.6E-19 114.4 6.6 135 22-161 8-152 (665)
55 2bs2_A Quinol-fumarate reducta 99.5 3.2E-13 1.1E-17 105.0 15.5 42 20-67 3-44 (660)
56 3gyx_A Adenylylsulfate reducta 99.5 1.8E-13 6.3E-18 106.3 14.0 142 20-168 20-207 (662)
57 1jnr_A Adenylylsulfate reducta 99.5 4.6E-13 1.6E-17 104.2 15.9 143 19-168 19-192 (643)
58 3itj_A Thioredoxin reductase 1 99.5 1.1E-13 3.7E-18 99.6 11.4 92 19-162 19-114 (338)
59 1d4d_A Flavocytochrome C fumar 99.5 3.5E-13 1.2E-17 103.6 14.6 140 21-167 125-291 (572)
60 2cul_A Glucose-inhibited divis 99.5 1.8E-13 6E-18 93.8 11.5 114 21-180 2-123 (232)
61 3ces_A MNMG, tRNA uridine 5-ca 99.5 1.2E-13 4E-18 106.3 11.4 139 21-180 27-179 (651)
62 1c0p_A D-amino acid oxidase; a 99.5 5E-14 1.7E-18 102.6 9.0 145 20-180 4-183 (363)
63 1yvv_A Amine oxidase, flavin-c 99.5 1.1E-13 3.8E-18 99.6 10.3 40 22-67 2-41 (336)
64 3axb_A Putative oxidoreductase 99.5 1.7E-13 5.8E-18 102.4 11.5 35 125-159 175-209 (448)
65 2e4g_A Tryptophan halogenase; 99.5 4.3E-14 1.5E-18 108.2 8.4 55 125-180 188-250 (550)
66 3c4a_A Probable tryptophan hyd 99.5 6.5E-15 2.2E-19 108.0 2.7 134 24-180 2-141 (381)
67 2gv8_A Monooxygenase; FMO, FAD 99.5 6.1E-14 2.1E-18 104.9 7.7 146 21-180 5-175 (447)
68 2zxi_A TRNA uridine 5-carboxym 99.5 2.9E-13 9.8E-18 103.9 11.3 140 21-180 26-178 (637)
69 1kf6_A Fumarate reductase flav 99.5 8.5E-13 2.9E-17 101.9 13.7 139 21-167 4-170 (602)
70 3f8d_A Thioredoxin reductase ( 99.5 4.9E-13 1.7E-17 95.5 11.2 88 21-163 14-101 (323)
71 2rgh_A Alpha-glycerophosphate 99.5 2E-12 6.8E-17 99.4 15.1 41 21-67 31-71 (571)
72 1chu_A Protein (L-aspartate ox 99.5 4.6E-13 1.6E-17 102.2 10.9 136 20-163 6-171 (540)
73 3d1c_A Flavin-containing putat 99.5 3.6E-13 1.2E-17 98.1 9.9 134 21-180 3-141 (369)
74 3ab1_A Ferredoxin--NADP reduct 99.5 6.6E-13 2.3E-17 96.5 11.2 113 19-180 11-129 (360)
75 3cty_A Thioredoxin reductase; 99.5 1.2E-12 4.2E-17 93.6 12.4 108 19-180 13-124 (319)
76 3cp8_A TRNA uridine 5-carboxym 99.5 8.5E-13 2.9E-17 101.5 12.1 142 19-180 18-172 (641)
77 2ywl_A Thioredoxin reductase r 99.5 4.5E-12 1.5E-16 83.4 13.7 103 23-180 2-108 (180)
78 3lzw_A Ferredoxin--NADP reduct 99.4 1.2E-12 4.1E-17 93.9 11.8 93 21-162 6-98 (332)
79 2e5v_A L-aspartate oxidase; ar 99.4 7.4E-12 2.5E-16 94.2 16.0 147 24-180 1-174 (472)
80 1vdc_A NTR, NADPH dependent th 99.4 1.9E-12 6.6E-17 93.0 12.0 108 21-180 7-122 (333)
81 2zbw_A Thioredoxin reductase; 99.4 3E-12 1E-16 92.1 13.0 111 21-180 4-119 (335)
82 3uox_A Otemo; baeyer-villiger 99.4 4.5E-12 1.5E-16 96.9 14.2 127 21-179 8-144 (545)
83 2q7v_A Thioredoxin reductase; 99.4 4.7E-12 1.6E-16 90.8 13.5 108 20-180 6-121 (325)
84 3g3e_A D-amino-acid oxidase; F 99.4 8.3E-14 2.8E-18 101.0 4.3 49 125-180 136-184 (351)
85 4ap3_A Steroid monooxygenase; 99.4 1.1E-12 3.7E-17 100.3 10.4 129 20-179 19-156 (549)
86 2q0l_A TRXR, thioredoxin reduc 99.4 3.6E-12 1.2E-16 90.8 12.2 105 23-180 2-112 (311)
87 3kkj_A Amine oxidase, flavin-c 99.4 2.5E-13 8.4E-18 94.9 5.7 40 22-67 2-41 (336)
88 4fk1_A Putative thioredoxin re 99.4 2.8E-12 9.4E-17 91.2 10.9 37 19-61 3-39 (304)
89 3ka7_A Oxidoreductase; structu 99.4 8E-12 2.7E-16 92.7 13.5 40 23-68 1-40 (425)
90 3gwf_A Cyclohexanone monooxyge 99.4 1.6E-12 5.6E-17 99.1 10.0 129 21-180 7-145 (540)
91 1w4x_A Phenylacetone monooxyge 99.4 4.3E-12 1.5E-16 97.0 11.1 130 20-180 14-152 (542)
92 4a5l_A Thioredoxin reductase; 99.4 2.6E-12 8.8E-17 91.6 8.6 36 21-62 3-38 (314)
93 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 8.7E-12 3E-16 90.1 10.8 42 23-67 2-43 (342)
94 2a87_A TRXR, TR, thioredoxin r 99.3 1.1E-11 3.9E-16 89.2 11.1 107 20-180 12-124 (335)
95 3fbs_A Oxidoreductase; structu 99.3 1.7E-11 5.8E-16 86.6 11.8 103 22-180 2-110 (297)
96 1trb_A Thioredoxin reductase; 99.3 1.1E-11 3.7E-16 88.6 10.8 107 21-180 4-114 (320)
97 3ihm_A Styrene monooxygenase A 99.3 3.5E-13 1.2E-17 100.3 3.1 138 21-180 21-165 (430)
98 3nrn_A Uncharacterized protein 99.3 1.2E-11 4.3E-16 91.6 11.5 39 24-68 2-40 (421)
99 4gcm_A TRXR, thioredoxin reduc 99.3 1.6E-11 5.6E-16 87.5 11.1 38 21-65 5-42 (312)
100 3r9u_A Thioredoxin reductase; 99.3 1.3E-11 4.5E-16 87.8 10.3 87 21-161 3-90 (315)
101 3s5w_A L-ornithine 5-monooxyge 99.3 1.5E-12 5.1E-17 97.7 5.6 119 21-160 29-156 (463)
102 2xve_A Flavin-containing monoo 99.3 2.5E-12 8.6E-17 96.6 6.4 138 23-179 3-163 (464)
103 3urh_A Dihydrolipoyl dehydroge 99.3 1.6E-11 5.5E-16 92.8 9.4 51 20-76 23-73 (491)
104 3l8k_A Dihydrolipoyl dehydroge 99.3 4.8E-12 1.6E-16 95.1 5.7 48 21-74 3-50 (466)
105 1ojt_A Surface protein; redox- 99.3 4.6E-11 1.6E-15 90.2 10.7 49 19-73 3-51 (482)
106 4b63_A L-ornithine N5 monooxyg 99.3 1.6E-11 5.5E-16 93.0 8.3 127 20-161 37-175 (501)
107 4gde_A UDP-galactopyranose mut 99.3 4.3E-12 1.5E-16 96.3 5.1 48 16-68 4-51 (513)
108 3qfa_A Thioredoxin reductase 1 99.3 3.3E-11 1.1E-15 91.7 9.8 37 19-61 29-65 (519)
109 1v59_A Dihydrolipoamide dehydr 99.2 1.7E-11 5.9E-16 92.3 7.9 51 20-76 3-53 (478)
110 1fl2_A Alkyl hydroperoxide red 99.2 1.1E-10 3.8E-15 83.0 11.4 84 22-159 1-84 (310)
111 3o0h_A Glutathione reductase; 99.2 1E-10 3.5E-15 88.3 10.6 46 21-73 25-70 (484)
112 1dxl_A Dihydrolipoamide dehydr 99.2 9E-11 3.1E-15 88.3 10.1 48 21-74 5-52 (470)
113 3fpz_A Thiazole biosynthetic e 99.2 1.7E-11 5.7E-16 88.1 5.2 48 21-72 64-111 (326)
114 2qae_A Lipoamide, dihydrolipoy 99.2 6.1E-11 2.1E-15 89.2 8.4 46 22-73 2-47 (468)
115 3dgz_A Thioredoxin reductase 2 99.2 1.4E-10 4.8E-15 87.6 10.4 35 20-60 4-38 (488)
116 1mo9_A ORF3; nucleotide bindin 99.2 2.3E-10 8E-15 87.1 11.7 44 19-68 40-83 (523)
117 2a8x_A Dihydrolipoyl dehydroge 99.2 4.4E-11 1.5E-15 89.9 7.3 39 22-67 3-41 (464)
118 3dk9_A Grase, GR, glutathione 99.2 1.8E-10 6.3E-15 86.8 10.6 48 19-73 17-64 (478)
119 2hqm_A GR, grase, glutathione 99.2 5E-11 1.7E-15 89.9 7.4 47 20-73 9-55 (479)
120 3lad_A Dihydrolipoamide dehydr 99.2 1.1E-10 3.7E-15 88.0 9.1 41 21-67 2-42 (476)
121 1xdi_A RV3303C-LPDA; reductase 99.2 1.2E-10 4.1E-15 88.3 9.1 46 22-74 2-50 (499)
122 3qvp_A Glucose oxidase; oxidor 99.2 3.1E-10 1.1E-14 87.2 11.4 37 20-61 17-53 (583)
123 1hyu_A AHPF, alkyl hydroperoxi 99.2 4.6E-10 1.6E-14 85.5 12.3 85 21-159 211-295 (521)
124 2bcg_G Secretory pathway GDP d 99.2 3.6E-11 1.2E-15 90.0 6.1 45 18-68 7-51 (453)
125 1zmd_A Dihydrolipoyl dehydroge 99.2 1.5E-10 5E-15 87.2 9.4 49 20-74 4-52 (474)
126 4dna_A Probable glutathione re 99.2 2E-10 6.9E-15 86.2 10.0 45 22-73 5-49 (463)
127 4b1b_A TRXR, thioredoxin reduc 99.1 7.5E-11 2.6E-15 89.9 6.1 53 21-79 41-101 (542)
128 3oc4_A Oxidoreductase, pyridin 99.1 1.4E-10 4.8E-15 86.8 7.2 38 23-64 3-40 (452)
129 3ics_A Coenzyme A-disulfide re 99.1 1.3E-10 4.5E-15 89.7 7.3 41 20-64 34-74 (588)
130 2eq6_A Pyruvate dehydrogenase 99.1 4.4E-10 1.5E-14 84.4 9.7 45 22-73 6-50 (464)
131 1v0j_A UDP-galactopyranose mut 99.1 7E-11 2.4E-15 87.1 5.3 43 19-67 4-47 (399)
132 1lvl_A Dihydrolipoamide dehydr 99.1 8.8E-10 3E-14 82.7 11.0 41 21-68 4-44 (458)
133 3q9t_A Choline dehydrogenase a 99.1 4.8E-10 1.6E-14 86.1 9.5 37 20-62 4-41 (577)
134 1ebd_A E3BD, dihydrolipoamide 99.1 9.9E-10 3.4E-14 82.3 11.0 45 22-73 3-47 (455)
135 1onf_A GR, grase, glutathione 99.1 1.3E-09 4.5E-14 82.6 11.4 45 22-73 2-46 (500)
136 3dgh_A TRXR-1, thioredoxin red 99.1 1.9E-09 6.6E-14 81.3 11.5 35 20-60 7-41 (483)
137 1zk7_A HGII, reductase, mercur 99.1 1.1E-09 3.8E-14 82.3 10.0 48 20-74 2-49 (467)
138 3k7m_X 6-hydroxy-L-nicotine ox 99.1 1.7E-10 5.8E-15 85.7 5.5 40 23-68 2-41 (431)
139 4dgk_A Phytoene dehydrogenase; 99.0 1.1E-10 3.9E-15 88.3 4.4 40 23-68 2-41 (501)
140 2bc0_A NADH oxidase; flavoprot 99.0 5.2E-10 1.8E-14 84.6 7.9 38 21-64 34-74 (490)
141 1s3e_A Amine oxidase [flavin-c 99.0 2.6E-10 9.1E-15 86.7 5.8 41 21-67 3-43 (520)
142 1rsg_A FMS1 protein; FAD bindi 99.0 2.4E-10 8.1E-15 87.0 5.4 41 21-67 7-48 (516)
143 3g5s_A Methylenetetrahydrofola 99.0 4.3E-09 1.5E-13 76.5 11.3 110 23-158 2-125 (443)
144 2b9w_A Putative aminooxidase; 99.0 4.3E-10 1.5E-14 83.4 6.2 42 21-68 5-47 (424)
145 3hdq_A UDP-galactopyranose mut 99.0 4.2E-10 1.4E-14 82.6 5.9 43 20-68 27-69 (397)
146 3nks_A Protoporphyrinogen oxid 99.0 3.2E-10 1.1E-14 85.3 5.4 40 23-68 3-44 (477)
147 3i6d_A Protoporphyrinogen oxid 99.0 2.2E-10 7.5E-15 85.9 4.3 40 22-67 5-50 (470)
148 3lxd_A FAD-dependent pyridine 99.0 6.4E-10 2.2E-14 82.4 6.7 37 21-63 8-46 (415)
149 2jae_A L-amino acid oxidase; o 99.0 5.2E-10 1.8E-14 84.5 6.3 42 20-67 9-50 (489)
150 3iwa_A FAD-dependent pyridine 99.0 6.3E-10 2.2E-14 83.7 6.3 38 22-63 3-40 (472)
151 2vvm_A Monoamine oxidase N; FA 99.0 8.4E-10 2.9E-14 83.5 6.7 40 23-68 40-79 (495)
152 2e1m_A L-glutamate oxidase; L- 99.0 7.6E-10 2.6E-14 80.6 6.1 41 21-67 43-84 (376)
153 1y56_A Hypothetical protein PH 99.0 1.4E-09 4.9E-14 82.2 7.6 39 21-66 107-145 (493)
154 2wpf_A Trypanothione reductase 99.0 3.5E-09 1.2E-13 80.2 9.7 34 20-58 5-38 (495)
155 3kd9_A Coenzyme A disulfide re 99.0 8.2E-10 2.8E-14 82.6 5.9 39 22-64 3-41 (449)
156 3p1w_A Rabgdi protein; GDI RAB 99.0 7.8E-10 2.7E-14 82.8 5.7 45 18-68 16-60 (475)
157 2ivd_A PPO, PPOX, protoporphyr 99.0 6.2E-10 2.1E-14 83.8 5.3 43 20-68 14-56 (478)
158 3lov_A Protoporphyrinogen oxid 99.0 6.7E-10 2.3E-14 83.6 5.3 40 22-67 4-45 (475)
159 2yg5_A Putrescine oxidase; oxi 99.0 7.7E-10 2.6E-14 82.7 5.6 41 21-67 4-44 (453)
160 1sez_A Protoporphyrinogen oxid 98.9 9.2E-10 3.1E-14 83.4 5.6 42 20-67 11-52 (504)
161 1q1r_A Putidaredoxin reductase 98.9 3.1E-09 1.1E-13 79.1 8.3 36 21-62 3-40 (431)
162 3fim_B ARYL-alcohol oxidase; A 98.9 1.4E-09 4.8E-14 83.3 6.4 37 22-63 2-38 (566)
163 3k30_A Histamine dehydrogenase 98.9 3.3E-09 1.1E-13 83.4 8.5 41 20-66 389-429 (690)
164 3cgb_A Pyridine nucleotide-dis 98.9 4.1E-09 1.4E-13 79.5 8.3 38 23-64 37-74 (480)
165 1ps9_A 2,4-dienoyl-COA reducta 98.9 5.5E-09 1.9E-13 81.9 9.0 39 21-65 372-410 (671)
166 1d5t_A Guanine nucleotide diss 98.9 2.1E-09 7.1E-14 80.1 6.2 43 19-67 3-45 (433)
167 3klj_A NAD(FAD)-dependent dehy 98.9 3.3E-09 1.1E-13 77.9 7.1 38 21-64 8-45 (385)
168 2cdu_A NADPH oxidase; flavoenz 98.9 5.5E-09 1.9E-13 78.2 8.4 38 23-64 1-38 (452)
169 2gag_A Heterotetrameric sarcos 98.9 6.9E-09 2.4E-13 84.2 9.3 41 21-67 127-167 (965)
170 1i8t_A UDP-galactopyranose mut 98.9 1.3E-09 4.5E-14 79.5 4.7 39 23-67 2-40 (367)
171 4dsg_A UDP-galactopyranose mut 98.9 2.3E-09 8E-14 80.9 5.9 42 21-68 8-50 (484)
172 2bi7_A UDP-galactopyranose mut 98.9 2.3E-09 7.9E-14 78.6 5.7 40 22-67 3-42 (384)
173 3ntd_A FAD-dependent pyridine 98.9 4E-09 1.4E-13 81.0 7.3 38 23-64 2-39 (565)
174 2yqu_A 2-oxoglutarate dehydrog 98.9 1.7E-09 6E-14 81.0 4.9 44 23-72 2-45 (455)
175 3ic9_A Dihydrolipoamide dehydr 98.8 2.3E-09 7.8E-14 81.1 4.9 45 22-73 8-52 (492)
176 2v3a_A Rubredoxin reductase; a 98.8 1.9E-08 6.6E-13 73.7 9.5 35 21-61 3-39 (384)
177 2r9z_A Glutathione amide reduc 98.8 2E-09 6.9E-14 80.8 4.3 40 21-67 3-42 (463)
178 1nhp_A NADH peroxidase; oxidor 98.8 9.7E-09 3.3E-13 76.8 7.9 37 24-64 2-38 (447)
179 3pl8_A Pyranose 2-oxidase; sub 98.8 3.9E-09 1.3E-13 81.9 5.7 41 20-66 44-84 (623)
180 1ges_A Glutathione reductase; 98.8 1.9E-09 6.6E-14 80.6 3.8 40 21-67 3-42 (450)
181 2iid_A L-amino-acid oxidase; f 98.8 3.9E-09 1.3E-13 79.9 5.5 41 21-67 32-72 (498)
182 2x8g_A Thioredoxin glutathione 98.8 4E-08 1.4E-12 76.0 10.9 34 21-60 106-139 (598)
183 2vdc_G Glutamate synthase [NAD 98.8 7.7E-09 2.6E-13 77.5 6.0 41 21-67 121-161 (456)
184 3h8l_A NADH oxidase; membrane 98.8 3.7E-09 1.2E-13 78.1 3.9 36 24-62 3-38 (409)
185 3fg2_P Putative rubredoxin red 98.8 5.9E-09 2E-13 76.9 4.8 35 23-63 2-38 (404)
186 4gut_A Lysine-specific histone 98.7 2E-08 6.9E-13 79.6 7.2 41 20-66 334-374 (776)
187 2v3a_A Rubredoxin reductase; a 98.7 2.3E-07 8E-12 68.0 11.7 92 22-180 145-241 (384)
188 1b37_A Protein (polyamine oxid 98.7 1.6E-08 5.5E-13 76.1 5.6 41 21-67 3-44 (472)
189 3sx6_A Sulfide-quinone reducta 98.7 8.7E-08 3E-12 71.4 8.8 37 23-62 5-41 (437)
190 2eq6_A Pyruvate dehydrogenase 98.7 3.3E-07 1.1E-11 68.8 11.4 71 23-161 170-240 (464)
191 2yqu_A 2-oxoglutarate dehydrog 98.7 4.2E-07 1.5E-11 68.1 11.7 90 23-180 168-262 (455)
192 1fec_A Trypanothione reductase 98.6 2.5E-08 8.5E-13 75.4 4.8 33 21-58 2-34 (490)
193 2z3y_A Lysine-specific histone 98.6 4.6E-08 1.6E-12 76.5 6.3 41 20-66 105-145 (662)
194 1o94_A Tmadh, trimethylamine d 98.6 5.8E-08 2E-12 76.8 6.9 42 21-68 388-429 (729)
195 1nhp_A NADH peroxidase; oxidor 98.6 6.5E-07 2.2E-11 66.9 12.2 90 22-180 149-244 (447)
196 1kdg_A CDH, cellobiose dehydro 98.6 3E-08 1E-12 75.9 5.0 37 20-62 5-41 (546)
197 3t37_A Probable dehydrogenase; 98.6 2.2E-08 7.5E-13 76.3 3.9 37 21-62 16-52 (526)
198 2xag_A Lysine-specific histone 98.6 6.5E-08 2.2E-12 77.4 6.4 40 21-66 277-316 (852)
199 1ges_A Glutathione reductase; 98.6 9.2E-07 3.2E-11 66.2 12.0 90 23-180 168-263 (450)
200 1v59_A Dihydrolipoamide dehydr 98.6 1E-06 3.5E-11 66.4 11.8 69 23-159 184-252 (478)
201 1ebd_A E3BD, dihydrolipoamide 98.5 1.1E-06 3.8E-11 65.8 11.2 90 23-180 171-268 (455)
202 3lxd_A FAD-dependent pyridine 98.5 2.9E-06 9.8E-11 62.8 13.2 91 22-180 152-249 (415)
203 1m6i_A Programmed cell death p 98.5 1.1E-07 3.7E-12 72.0 5.2 41 19-63 8-48 (493)
204 2gqw_A Ferredoxin reductase; f 98.5 1E-07 3.5E-12 70.4 4.9 37 21-63 6-44 (408)
205 3fg2_P Putative rubredoxin red 98.5 3.3E-06 1.1E-10 62.3 12.7 90 23-180 143-239 (404)
206 1zmd_A Dihydrolipoyl dehydroge 98.5 2.4E-06 8.1E-11 64.4 12.1 74 23-163 179-252 (474)
207 1gte_A Dihydropyrimidine dehyd 98.5 1.7E-07 6E-12 76.6 5.8 40 21-66 186-226 (1025)
208 1lqt_A FPRA; NADP+ derivative, 98.5 1.9E-07 6.5E-12 70.0 5.2 45 22-66 3-48 (456)
209 1ju2_A HydroxynitrIle lyase; f 98.5 9.2E-08 3.2E-12 73.1 3.5 37 20-63 24-60 (536)
210 3cgb_A Pyridine nucleotide-dis 98.4 3.6E-06 1.2E-10 63.5 11.9 89 22-180 186-280 (480)
211 1vg0_A RAB proteins geranylger 98.4 3.7E-07 1.3E-11 70.7 6.2 45 18-68 4-48 (650)
212 2r9z_A Glutathione amide reduc 98.4 3E-06 1E-10 63.7 11.0 34 23-62 167-200 (463)
213 3ef6_A Toluene 1,2-dioxygenase 98.4 5.2E-06 1.8E-10 61.4 12.0 89 23-180 144-239 (410)
214 1coy_A Cholesterol oxidase; ox 98.4 2.9E-07 1E-11 69.9 5.4 37 20-62 9-45 (507)
215 2qae_A Lipoamide, dihydrolipoy 98.4 5.8E-06 2E-10 62.1 12.4 90 23-180 175-274 (468)
216 1q1r_A Putidaredoxin reductase 98.4 8.2E-06 2.8E-10 60.7 13.1 91 23-180 150-248 (431)
217 1cjc_A Protein (adrenodoxin re 98.4 2.7E-07 9.1E-12 69.3 5.1 39 22-66 6-46 (460)
218 3h28_A Sulfide-quinone reducta 98.4 3.1E-07 1.1E-11 68.3 5.2 37 23-63 3-39 (430)
219 1xhc_A NADH oxidase /nitrite r 98.4 2.2E-07 7.7E-12 67.7 4.2 35 22-63 8-42 (367)
220 3ef6_A Toluene 1,2-dioxygenase 98.4 3.7E-07 1.3E-11 67.5 5.5 36 23-64 3-40 (410)
221 1n4w_A CHOD, cholesterol oxida 98.4 3.7E-07 1.3E-11 69.3 5.4 36 21-62 4-39 (504)
222 1lvl_A Dihydrolipoamide dehydr 98.4 3E-06 1E-10 63.6 9.9 35 23-63 172-206 (458)
223 3o0h_A Glutathione reductase; 98.4 9.5E-06 3.2E-10 61.3 12.7 90 23-180 192-286 (484)
224 1dxl_A Dihydrolipoamide dehydr 98.4 2.6E-06 8.9E-11 64.0 9.6 90 23-180 178-277 (470)
225 1fec_A Trypanothione reductase 98.4 6.9E-06 2.4E-10 62.1 11.8 90 23-180 188-286 (490)
226 2cdu_A NADPH oxidase; flavoenz 98.4 8.2E-06 2.8E-10 61.1 12.1 90 23-180 150-245 (452)
227 3ayj_A Pro-enzyme of L-phenyla 98.3 2.3E-07 7.8E-12 72.7 3.4 36 22-63 56-100 (721)
228 1zk7_A HGII, reductase, mercur 98.3 9.7E-06 3.3E-10 60.9 12.1 89 23-180 177-269 (467)
229 2bc0_A NADH oxidase; flavoprot 98.3 7.1E-06 2.4E-10 62.1 11.4 89 23-180 195-289 (490)
230 3ic9_A Dihydrolipoamide dehydr 98.3 1.1E-05 3.6E-10 61.2 12.1 35 23-63 175-209 (492)
231 1mo9_A ORF3; nucleotide bindin 98.3 1.3E-05 4.3E-10 61.2 12.5 90 23-180 215-314 (523)
232 3urh_A Dihydrolipoyl dehydroge 98.3 8E-06 2.7E-10 61.8 11.2 90 23-180 199-298 (491)
233 1xdi_A RV3303C-LPDA; reductase 98.3 1.5E-05 5.1E-10 60.4 12.7 90 23-180 183-277 (499)
234 2jbv_A Choline oxidase; alcoho 98.3 5.2E-07 1.8E-11 69.1 4.2 37 21-63 12-49 (546)
235 2hqm_A GR, grase, glutathione 98.3 1.9E-05 6.5E-10 59.5 12.5 34 23-62 186-219 (479)
236 1xhc_A NADH oxidase /nitrite r 98.3 1E-05 3.4E-10 59.0 10.6 34 23-62 144-177 (367)
237 1onf_A GR, grase, glutathione 98.3 2.1E-05 7.3E-10 59.6 12.7 90 23-180 177-273 (500)
238 2gqw_A Ferredoxin reductase; f 98.3 2.4E-05 8.2E-10 57.8 12.7 88 23-180 146-237 (408)
239 1trb_A Thioredoxin reductase; 98.3 1.7E-05 6E-10 56.3 11.7 34 23-62 146-179 (320)
240 3iwa_A FAD-dependent pyridine 98.3 2E-05 6.8E-10 59.3 12.2 90 23-180 160-256 (472)
241 2a8x_A Dihydrolipoyl dehydroge 98.3 2.3E-05 7.9E-10 58.8 12.4 34 23-62 172-205 (464)
242 1ojt_A Surface protein; redox- 98.2 7.9E-06 2.7E-10 61.7 9.8 71 23-161 186-256 (482)
243 3vrd_B FCCB subunit, flavocyto 98.2 1.3E-06 4.4E-11 64.3 5.1 35 24-62 4-38 (401)
244 3oc4_A Oxidoreductase, pyridin 98.2 2.8E-05 9.5E-10 58.2 12.4 91 23-180 148-242 (452)
245 4dna_A Probable glutathione re 98.2 2.9E-05 9.9E-10 58.3 12.5 89 23-180 171-266 (463)
246 3ntd_A FAD-dependent pyridine 98.2 2.6E-05 9.1E-10 59.9 12.4 34 23-62 152-185 (565)
247 2wpf_A Trypanothione reductase 98.2 2.4E-05 8.2E-10 59.3 11.9 90 23-180 192-290 (495)
248 1gpe_A Protein (glucose oxidas 98.2 1.4E-06 4.7E-11 67.3 4.9 38 21-63 23-60 (587)
249 3lad_A Dihydrolipoamide dehydr 98.2 3.1E-05 1.1E-09 58.3 11.9 90 23-180 181-278 (476)
250 3hyw_A Sulfide-quinone reducta 98.2 2.1E-06 7.1E-11 63.9 5.2 35 24-62 4-38 (430)
251 4eqs_A Coenzyme A disulfide re 98.1 2E-06 6.9E-11 64.1 4.5 37 24-64 2-38 (437)
252 3ics_A Coenzyme A-disulfide re 98.1 3.4E-05 1.2E-09 59.6 10.9 89 23-180 188-280 (588)
253 3dgh_A TRXR-1, thioredoxin red 98.1 5.1E-05 1.7E-09 57.3 11.5 72 23-163 188-259 (483)
254 4g6h_A Rotenone-insensitive NA 98.1 2.2E-06 7.5E-11 65.0 4.0 34 22-61 42-75 (502)
255 3dk9_A Grase, GR, glutathione 98.1 8.1E-05 2.8E-09 56.1 12.5 73 23-163 188-260 (478)
256 3s5w_A L-ornithine 5-monooxyge 98.1 6.1E-05 2.1E-09 56.4 11.5 38 22-63 227-264 (463)
257 3dgz_A Thioredoxin reductase 2 98.1 7.1E-05 2.4E-09 56.6 11.5 72 23-163 186-257 (488)
258 4b1b_A TRXR, thioredoxin reduc 98.0 5.5E-05 1.9E-09 57.9 10.6 72 23-163 224-295 (542)
259 3ab1_A Ferredoxin--NADP reduct 98.0 2.5E-05 8.5E-10 56.6 8.2 34 23-62 164-197 (360)
260 3klj_A NAD(FAD)-dependent dehy 98.0 3E-05 1E-09 56.9 8.4 35 23-63 147-181 (385)
261 3kd9_A Coenzyme A disulfide re 98.0 0.00016 5.6E-09 54.0 12.4 34 23-62 149-182 (449)
262 3itj_A Thioredoxin reductase 1 98.0 5.7E-05 1.9E-09 53.9 9.3 34 23-62 174-207 (338)
263 3cty_A Thioredoxin reductase; 98.0 7.2E-05 2.5E-09 53.2 9.8 33 23-61 156-188 (319)
264 2q0l_A TRXR, thioredoxin reduc 97.9 0.00017 5.7E-09 51.0 10.6 34 23-62 144-177 (311)
265 3d1c_A Flavin-containing putat 97.9 0.00015 5.3E-09 52.4 10.4 34 23-62 167-200 (369)
266 1m6i_A Programmed cell death p 97.9 0.00018 6.3E-09 54.4 11.0 94 23-180 181-280 (493)
267 3r9u_A Thioredoxin reductase; 97.9 0.00017 5.9E-09 50.9 10.2 34 23-62 148-181 (315)
268 1fl2_A Alkyl hydroperoxide red 97.8 0.00016 5.6E-09 51.0 9.7 34 23-62 145-178 (310)
269 4g6h_A Rotenone-insensitive NA 97.8 0.0002 7E-09 54.3 10.6 27 132-158 273-299 (502)
270 4eqs_A Coenzyme A disulfide re 97.8 0.00011 3.9E-09 54.7 9.0 34 23-62 148-181 (437)
271 3qfa_A Thioredoxin reductase 1 97.8 0.00027 9.2E-09 53.9 10.5 32 23-60 211-242 (519)
272 2zbw_A Thioredoxin reductase; 97.8 0.0003 1E-08 50.2 10.2 34 23-62 153-186 (335)
273 2q7v_A Thioredoxin reductase; 97.7 0.0005 1.7E-08 48.9 10.2 34 23-62 153-186 (325)
274 3k30_A Histamine dehydrogenase 97.7 0.00037 1.3E-08 55.0 10.2 35 23-63 524-560 (690)
275 1vdc_A NTR, NADPH dependent th 97.7 0.00022 7.5E-09 50.9 8.2 34 23-62 160-193 (333)
276 2g1u_A Hypothetical protein TM 97.7 8.4E-05 2.9E-09 47.3 5.3 35 22-62 19-53 (155)
277 3l8k_A Dihydrolipoyl dehydroge 97.6 0.0011 3.7E-08 49.8 11.0 34 23-62 173-206 (466)
278 3fwz_A Inner membrane protein 97.6 0.00013 4.4E-09 45.6 5.1 35 22-62 7-41 (140)
279 3lzw_A Ferredoxin--NADP reduct 97.5 0.00094 3.2E-08 47.4 9.8 34 23-62 155-188 (332)
280 4gcm_A TRXR, thioredoxin reduc 97.5 0.00012 3.9E-09 52.0 4.6 36 23-64 146-181 (312)
281 3k6j_A Protein F01G10.3, confi 97.4 0.00041 1.4E-08 51.9 6.8 34 23-62 55-88 (460)
282 1id1_A Putative potassium chan 97.4 0.00031 1.1E-08 44.5 5.3 33 23-61 4-36 (153)
283 1lss_A TRK system potassium up 97.4 0.00024 8.1E-09 44.0 4.6 32 24-61 6-37 (140)
284 3llv_A Exopolyphosphatase-rela 97.4 0.00023 7.8E-09 44.4 4.5 32 24-61 8-39 (141)
285 3f8d_A Thioredoxin reductase ( 97.4 0.0019 6.6E-08 45.6 9.7 35 22-62 154-188 (323)
286 3ado_A Lambda-crystallin; L-gu 97.3 0.00024 8.1E-09 50.6 4.2 33 23-61 7-39 (319)
287 4a5l_A Thioredoxin reductase; 97.3 0.00028 9.6E-09 49.9 4.6 35 23-63 153-187 (314)
288 4e12_A Diketoreductase; oxidor 97.2 0.00052 1.8E-08 48.1 5.3 34 23-62 5-38 (283)
289 3ic5_A Putative saccharopine d 97.2 0.00064 2.2E-08 40.7 4.9 32 24-61 7-39 (118)
290 1f0y_A HCDH, L-3-hydroxyacyl-C 97.2 0.0007 2.4E-08 47.9 5.4 32 24-61 17-48 (302)
291 3c85_A Putative glutathione-re 97.1 0.00041 1.4E-08 45.3 3.8 33 23-61 40-73 (183)
292 2hmt_A YUAA protein; RCK, KTN, 97.0 0.00084 2.9E-08 41.7 4.4 32 24-61 8-39 (144)
293 3i83_A 2-dehydropantoate 2-red 97.0 0.00098 3.3E-08 47.6 5.1 32 24-61 4-35 (320)
294 3l4b_C TRKA K+ channel protien 97.0 0.00073 2.5E-08 45.4 3.9 33 24-62 2-34 (218)
295 3hn2_A 2-dehydropantoate 2-red 96.9 0.0011 3.7E-08 47.2 4.5 32 24-61 4-35 (312)
296 2dpo_A L-gulonate 3-dehydrogen 96.9 0.001 3.5E-08 47.4 4.3 34 23-62 7-40 (319)
297 2ewd_A Lactate dehydrogenase,; 96.9 0.0015 5.1E-08 46.6 4.9 33 23-61 5-38 (317)
298 2xve_A Flavin-containing monoo 96.8 0.0013 4.3E-08 49.5 4.7 35 23-63 198-232 (464)
299 1bg6_A N-(1-D-carboxylethyl)-L 96.8 0.0016 5.5E-08 47.0 5.1 33 23-61 5-37 (359)
300 1ks9_A KPA reductase;, 2-dehyd 96.8 0.002 6.7E-08 45.1 5.2 33 24-62 2-34 (291)
301 1pzg_A LDH, lactate dehydrogen 96.8 0.0019 6.5E-08 46.3 5.2 33 23-61 10-43 (331)
302 2raf_A Putative dinucleotide-b 96.8 0.0023 7.8E-08 42.8 5.2 34 23-62 20-53 (209)
303 2a87_A TRXR, TR, thioredoxin r 96.8 0.0016 5.5E-08 46.5 4.6 35 23-63 156-190 (335)
304 3ghy_A Ketopantoate reductase 96.8 0.0019 6.5E-08 46.4 4.9 31 24-60 5-35 (335)
305 3doj_A AT3G25530, dehydrogenas 96.8 0.0024 8.2E-08 45.4 5.4 34 23-62 22-55 (310)
306 1t2d_A LDH-P, L-lactate dehydr 96.8 0.0026 9E-08 45.4 5.5 33 23-61 5-38 (322)
307 4dio_A NAD(P) transhydrogenase 96.7 0.0024 8.1E-08 47.0 5.3 35 22-62 190-224 (405)
308 2gv8_A Monooxygenase; FMO, FAD 96.7 0.0015 5.1E-08 48.8 4.3 34 23-62 213-247 (447)
309 2x8g_A Thioredoxin glutathione 96.7 0.0019 6.5E-08 50.1 5.0 32 23-60 287-318 (598)
310 3gwf_A Cyclohexanone monooxyge 96.7 0.0017 5.7E-08 49.8 4.5 34 23-62 179-212 (540)
311 4a7p_A UDP-glucose dehydrogena 96.7 0.0026 8.8E-08 47.5 5.3 35 22-62 8-42 (446)
312 3qha_A Putative oxidoreductase 96.7 0.0015 5E-08 46.1 3.9 36 22-63 15-50 (296)
313 2y0c_A BCEC, UDP-glucose dehyd 96.7 0.0023 7.9E-08 48.3 5.1 33 23-61 9-41 (478)
314 1ps9_A 2,4-dienoyl-COA reducta 96.7 0.012 3.9E-07 46.4 9.2 27 23-55 495-521 (671)
315 1lld_A L-lactate dehydrogenase 96.7 0.0025 8.4E-08 45.4 5.0 32 24-61 9-42 (319)
316 3uox_A Otemo; baeyer-villiger 96.7 0.0016 5.5E-08 50.0 4.1 34 23-62 186-219 (545)
317 3g79_A NDP-N-acetyl-D-galactos 96.6 0.0023 7.8E-08 48.2 4.8 34 23-62 19-54 (478)
318 2hjr_A Malate dehydrogenase; m 96.6 0.0031 1.1E-07 45.2 5.2 33 23-61 15-48 (328)
319 3g17_A Similar to 2-dehydropan 96.6 0.0016 5.5E-08 45.9 3.7 32 24-61 4-35 (294)
320 3g0o_A 3-hydroxyisobutyrate de 96.6 0.0025 8.5E-08 45.1 4.6 34 23-62 8-41 (303)
321 3dfz_A SIRC, precorrin-2 dehyd 96.6 0.0021 7.2E-08 43.3 4.0 33 22-60 31-63 (223)
322 4ap3_A Steroid monooxygenase; 96.6 0.0019 6.5E-08 49.6 4.3 34 23-62 192-225 (549)
323 1jw9_B Molybdopterin biosynthe 96.6 0.0023 7.9E-08 44.0 4.3 34 22-61 31-65 (249)
324 1evy_A Glycerol-3-phosphate de 96.6 0.0018 6.2E-08 47.0 4.0 32 24-61 17-48 (366)
325 1zcj_A Peroxisomal bifunctiona 96.6 0.0025 8.4E-08 47.9 4.7 33 23-61 38-70 (463)
326 2ew2_A 2-dehydropantoate 2-red 96.6 0.0031 1.1E-07 44.6 5.0 32 24-61 5-36 (316)
327 1kyq_A Met8P, siroheme biosynt 96.6 0.0015 5E-08 45.5 3.2 33 23-61 14-46 (274)
328 3p2y_A Alanine dehydrogenase/p 96.6 0.0026 8.8E-08 46.4 4.4 35 22-62 184-218 (381)
329 1z82_A Glycerol-3-phosphate de 96.6 0.0035 1.2E-07 45.0 5.1 34 22-61 14-47 (335)
330 3gg2_A Sugar dehydrogenase, UD 96.5 0.0032 1.1E-07 47.1 5.0 33 24-62 4-36 (450)
331 1hyu_A AHPF, alkyl hydroperoxi 96.5 0.0025 8.4E-08 48.6 4.5 35 23-63 356-390 (521)
332 3l6d_A Putative oxidoreductase 96.5 0.0037 1.3E-07 44.3 5.1 34 23-62 10-43 (306)
333 2v6b_A L-LDH, L-lactate dehydr 96.5 0.0037 1.3E-07 44.3 5.0 32 24-61 2-35 (304)
334 4e21_A 6-phosphogluconate dehy 96.5 0.0031 1.1E-07 45.7 4.6 36 21-62 21-56 (358)
335 3k96_A Glycerol-3-phosphate de 96.5 0.003 1E-07 45.8 4.3 33 23-61 30-62 (356)
336 3lk7_A UDP-N-acetylmuramoylala 96.5 0.0034 1.2E-07 47.0 4.7 33 23-61 10-42 (451)
337 4huj_A Uncharacterized protein 96.4 0.0025 8.6E-08 42.9 3.6 34 23-62 24-58 (220)
338 3tl2_A Malate dehydrogenase; c 96.4 0.005 1.7E-07 43.9 5.2 32 23-60 9-41 (315)
339 2x5o_A UDP-N-acetylmuramoylala 96.4 0.0028 9.5E-08 47.3 4.1 34 24-63 7-40 (439)
340 4dll_A 2-hydroxy-3-oxopropiona 96.4 0.0032 1.1E-07 44.9 4.3 34 23-62 32-65 (320)
341 1guz_A Malate dehydrogenase; o 96.4 0.0054 1.8E-07 43.6 5.3 35 24-62 2-36 (310)
342 3gvi_A Malate dehydrogenase; N 96.4 0.006 2E-07 43.6 5.5 34 23-62 8-42 (324)
343 3vtf_A UDP-glucose 6-dehydroge 96.4 0.0048 1.6E-07 45.9 5.0 35 21-61 20-54 (444)
344 3pef_A 6-phosphogluconate dehy 96.4 0.0048 1.7E-07 43.2 4.9 33 24-62 3-35 (287)
345 2a9f_A Putative malic enzyme ( 96.4 0.0041 1.4E-07 45.4 4.5 35 21-61 187-222 (398)
346 3mog_A Probable 3-hydroxybutyr 96.4 0.0044 1.5E-07 46.8 4.8 34 23-62 6-39 (483)
347 3dtt_A NADP oxidoreductase; st 96.4 0.0048 1.6E-07 42.2 4.7 35 22-62 19-53 (245)
348 3l9w_A Glutathione-regulated p 96.4 0.0039 1.3E-07 46.1 4.5 32 24-61 6-37 (413)
349 3hwr_A 2-dehydropantoate 2-red 96.4 0.0051 1.7E-07 43.8 5.0 32 23-61 20-51 (318)
350 4g65_A TRK system potassium up 96.3 0.0019 6.5E-08 48.5 2.7 32 24-61 5-36 (461)
351 1x13_A NAD(P) transhydrogenase 96.3 0.0054 1.8E-07 45.2 4.9 35 22-62 172-206 (401)
352 1mv8_A GMD, GDP-mannose 6-dehy 96.3 0.0044 1.5E-07 46.2 4.5 32 24-61 2-33 (436)
353 2vdc_G Glutamate synthase [NAD 96.3 0.0056 1.9E-07 45.9 5.1 34 23-62 265-299 (456)
354 3p7m_A Malate dehydrogenase; p 96.3 0.0082 2.8E-07 42.9 5.5 34 23-62 6-40 (321)
355 3oj0_A Glutr, glutamyl-tRNA re 96.3 0.0019 6.4E-08 40.4 2.0 35 22-62 21-55 (144)
356 3h8v_A Ubiquitin-like modifier 96.2 0.0062 2.1E-07 42.8 4.7 35 21-61 35-70 (292)
357 2uyy_A N-PAC protein; long-cha 96.2 0.0075 2.6E-07 42.8 5.3 34 23-62 31-64 (316)
358 1l7d_A Nicotinamide nucleotide 96.2 0.0071 2.4E-07 44.3 5.2 35 22-62 172-206 (384)
359 1pjc_A Protein (L-alanine dehy 96.2 0.0072 2.5E-07 43.9 5.1 33 23-61 168-200 (361)
360 2p4q_A 6-phosphogluconate dehy 96.2 0.007 2.4E-07 45.9 5.2 35 22-62 10-44 (497)
361 3e8x_A Putative NAD-dependent 96.2 0.0086 3E-07 40.5 5.2 34 23-62 22-56 (236)
362 1ur5_A Malate dehydrogenase; o 96.2 0.0089 3.1E-07 42.4 5.4 32 24-61 4-36 (309)
363 1cjc_A Protein (adrenodoxin re 96.2 0.0064 2.2E-07 45.6 4.9 41 23-63 146-201 (460)
364 3ktd_A Prephenate dehydrogenas 96.2 0.0065 2.2E-07 43.8 4.6 33 23-61 9-41 (341)
365 2zyd_A 6-phosphogluconate dehy 96.2 0.0052 1.8E-07 46.4 4.3 36 21-62 14-49 (480)
366 1vl6_A Malate oxidoreductase; 96.1 0.0066 2.3E-07 44.2 4.5 34 21-60 191-225 (388)
367 1txg_A Glycerol-3-phosphate de 96.1 0.0055 1.9E-07 43.8 4.2 30 24-59 2-31 (335)
368 2izz_A Pyrroline-5-carboxylate 96.1 0.0081 2.8E-07 42.9 4.9 34 23-62 23-60 (322)
369 4ffl_A PYLC; amino acid, biosy 96.1 0.01 3.4E-07 43.0 5.5 34 24-63 3-36 (363)
370 2vns_A Metalloreductase steap3 96.1 0.0095 3.2E-07 39.9 5.0 33 23-61 29-61 (215)
371 3cky_A 2-hydroxymethyl glutara 96.1 0.0059 2E-07 43.0 4.1 33 23-61 5-37 (301)
372 3fbs_A Oxidoreductase; structu 96.1 0.0049 1.7E-07 43.0 3.6 33 23-62 142-174 (297)
373 3pdu_A 3-hydroxyisobutyrate de 96.1 0.005 1.7E-07 43.2 3.6 33 24-62 3-35 (287)
374 3rui_A Ubiquitin-like modifier 96.1 0.0099 3.4E-07 42.7 5.1 35 22-62 34-69 (340)
375 1a5z_A L-lactate dehydrogenase 96.1 0.0068 2.3E-07 43.2 4.3 32 24-61 2-35 (319)
376 2q3e_A UDP-glucose 6-dehydroge 96.1 0.006 2E-07 45.9 4.1 32 24-61 7-40 (467)
377 3phh_A Shikimate dehydrogenase 96.0 0.011 3.9E-07 41.0 5.2 34 23-62 119-152 (269)
378 1nyt_A Shikimate 5-dehydrogena 96.0 0.011 3.7E-07 41.2 5.0 33 23-61 120-152 (271)
379 2eez_A Alanine dehydrogenase; 96.0 0.01 3.5E-07 43.2 5.1 33 23-61 167-199 (369)
380 4ezb_A Uncharacterized conserv 96.0 0.0082 2.8E-07 42.8 4.5 33 23-61 25-58 (317)
381 2wtb_A MFP2, fatty acid multif 96.0 0.0072 2.5E-07 48.0 4.6 34 23-62 313-346 (725)
382 2qyt_A 2-dehydropantoate 2-red 96.0 0.0064 2.2E-07 43.1 4.0 30 24-59 10-45 (317)
383 1x0v_A GPD-C, GPDH-C, glycerol 96.0 0.0056 1.9E-07 44.2 3.7 33 24-62 10-49 (354)
384 4gwg_A 6-phosphogluconate dehy 96.0 0.011 3.7E-07 44.7 5.2 34 23-62 5-38 (484)
385 3ggo_A Prephenate dehydrogenas 96.0 0.0098 3.3E-07 42.3 4.8 33 23-61 34-68 (314)
386 2p91_A Enoyl-[acyl-carrier-pro 96.0 0.0094 3.2E-07 41.6 4.6 54 1-61 1-57 (285)
387 2h78_A Hibadh, 3-hydroxyisobut 96.0 0.009 3.1E-07 42.1 4.5 33 24-62 5-37 (302)
388 3qsg_A NAD-binding phosphogluc 95.9 0.0083 2.8E-07 42.6 4.3 32 23-60 25-57 (312)
389 2pv7_A T-protein [includes: ch 95.9 0.0099 3.4E-07 41.9 4.6 33 24-62 23-56 (298)
390 1jay_A Coenzyme F420H2:NADP+ o 95.9 0.012 4E-07 39.2 4.8 32 24-61 2-34 (212)
391 2f1k_A Prephenate dehydrogenas 95.9 0.012 4.2E-07 40.9 5.0 32 24-61 2-33 (279)
392 1y6j_A L-lactate dehydrogenase 95.9 0.014 4.7E-07 41.6 5.2 33 23-61 8-42 (318)
393 1yj8_A Glycerol-3-phosphate de 95.9 0.0067 2.3E-07 44.2 3.7 33 24-62 23-62 (375)
394 2vhw_A Alanine dehydrogenase; 95.9 0.013 4.4E-07 42.8 5.1 33 23-61 169-201 (377)
395 3zwc_A Peroxisomal bifunctiona 95.9 0.008 2.8E-07 47.7 4.3 34 23-62 317-350 (742)
396 3eag_A UDP-N-acetylmuramate:L- 95.9 0.012 4.2E-07 42.0 4.9 33 24-62 6-39 (326)
397 3k5i_A Phosphoribosyl-aminoimi 95.9 0.012 4.3E-07 43.3 5.0 39 16-61 18-56 (403)
398 2pgd_A 6-phosphogluconate dehy 95.9 0.012 4E-07 44.5 5.0 32 24-61 4-35 (482)
399 1hyh_A L-hicdh, L-2-hydroxyiso 95.9 0.0096 3.3E-07 42.2 4.3 32 24-61 3-36 (309)
400 4a9w_A Monooxygenase; baeyer-v 95.8 0.0088 3E-07 42.8 4.2 32 23-61 164-195 (357)
401 3tri_A Pyrroline-5-carboxylate 95.8 0.014 4.9E-07 40.8 5.1 34 23-62 4-40 (280)
402 1oju_A MDH, malate dehydrogena 95.8 0.01 3.4E-07 41.9 4.3 32 24-61 2-35 (294)
403 4dgk_A Phytoene dehydrogenase; 95.8 0.025 8.5E-07 42.7 6.7 39 131-170 221-259 (501)
404 1zud_1 Adenylyltransferase THI 95.8 0.012 4.2E-07 40.4 4.6 34 22-61 28-62 (251)
405 2rcy_A Pyrroline carboxylate r 95.8 0.012 4E-07 40.6 4.5 34 24-63 6-43 (262)
406 1o94_A Tmadh, trimethylamine d 95.8 0.0097 3.3E-07 47.3 4.5 33 23-61 529-563 (729)
407 2i6t_A Ubiquitin-conjugating e 95.8 0.011 3.6E-07 42.0 4.3 34 23-62 15-50 (303)
408 3pid_A UDP-glucose 6-dehydroge 95.8 0.0098 3.4E-07 44.2 4.3 33 23-62 37-69 (432)
409 2gf2_A Hibadh, 3-hydroxyisobut 95.8 0.012 4E-07 41.3 4.5 33 24-62 2-34 (296)
410 2aef_A Calcium-gated potassium 95.8 0.0047 1.6E-07 41.9 2.4 34 22-62 9-42 (234)
411 1wdk_A Fatty oxidation complex 95.8 0.0092 3.1E-07 47.3 4.3 34 23-62 315-348 (715)
412 2o3j_A UDP-glucose 6-dehydroge 95.8 0.0082 2.8E-07 45.3 3.8 34 24-61 11-44 (481)
413 2g5c_A Prephenate dehydrogenas 95.7 0.016 5.4E-07 40.4 5.0 32 24-61 3-36 (281)
414 1gte_A Dihydropyrimidine dehyd 95.7 0.013 4.4E-07 48.4 5.1 32 24-61 334-366 (1025)
415 3c7a_A Octopine dehydrogenase; 95.7 0.0087 3E-07 44.1 3.8 29 24-58 4-33 (404)
416 3ojo_A CAP5O; rossmann fold, c 95.7 0.01 3.4E-07 44.2 4.1 34 23-62 12-45 (431)
417 3pqe_A L-LDH, L-lactate dehydr 95.7 0.013 4.6E-07 41.8 4.6 33 23-61 6-40 (326)
418 3ond_A Adenosylhomocysteinase; 95.7 0.012 4.2E-07 44.2 4.6 33 23-61 266-298 (488)
419 1ldn_A L-lactate dehydrogenase 95.7 0.015 5E-07 41.5 4.8 33 23-61 7-41 (316)
420 1pjq_A CYSG, siroheme synthase 95.7 0.016 5.4E-07 43.5 5.1 32 23-60 13-44 (457)
421 1yqg_A Pyrroline-5-carboxylate 95.7 0.012 4.2E-07 40.5 4.3 32 24-61 2-34 (263)
422 2egg_A AROE, shikimate 5-dehyd 95.7 0.015 5.3E-07 41.0 4.7 33 23-61 142-175 (297)
423 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.7 0.015 5.1E-07 43.9 4.9 32 24-61 3-34 (478)
424 3ldh_A Lactate dehydrogenase; 95.7 0.02 6.9E-07 41.0 5.3 33 23-61 22-56 (330)
425 3c24_A Putative oxidoreductase 95.7 0.017 5.9E-07 40.4 5.0 32 24-61 13-45 (286)
426 3orq_A N5-carboxyaminoimidazol 95.7 0.029 1E-06 40.9 6.3 35 22-62 12-46 (377)
427 2iz1_A 6-phosphogluconate dehy 95.7 0.017 5.9E-07 43.5 5.2 33 23-61 6-38 (474)
428 1vpd_A Tartronate semialdehyde 95.7 0.014 4.8E-07 41.0 4.5 32 24-61 7-38 (299)
429 3nep_X Malate dehydrogenase; h 95.6 0.014 4.9E-07 41.5 4.4 32 24-61 2-35 (314)
430 4e4t_A Phosphoribosylaminoimid 95.6 0.026 8.9E-07 41.8 5.9 35 22-62 35-69 (419)
431 1zej_A HBD-9, 3-hydroxyacyl-CO 95.6 0.014 4.8E-07 41.1 4.2 33 22-61 12-44 (293)
432 4gx0_A TRKA domain protein; me 95.6 0.019 6.4E-07 44.3 5.2 35 23-63 349-383 (565)
433 1p77_A Shikimate 5-dehydrogena 95.6 0.014 4.7E-07 40.6 4.1 33 23-61 120-152 (272)
434 4aj2_A L-lactate dehydrogenase 95.5 0.025 8.4E-07 40.6 5.4 34 22-61 19-54 (331)
435 3gpi_A NAD-dependent epimerase 95.5 0.025 8.7E-07 39.3 5.4 33 24-62 5-37 (286)
436 1np3_A Ketol-acid reductoisome 95.5 0.022 7.4E-07 41.0 5.1 33 24-62 18-50 (338)
437 1lqt_A FPRA; NADP+ derivative, 95.5 0.017 5.9E-07 43.3 4.7 41 23-63 148-203 (456)
438 3ego_A Probable 2-dehydropanto 95.5 0.019 6.3E-07 40.7 4.6 31 24-61 4-34 (307)
439 3gt0_A Pyrroline-5-carboxylate 95.5 0.018 6.1E-07 39.4 4.4 33 24-62 4-40 (247)
440 3u62_A Shikimate dehydrogenase 95.5 0.023 8E-07 39.1 4.9 33 24-62 110-143 (253)
441 3h5n_A MCCB protein; ubiquitin 95.5 0.017 6E-07 41.8 4.5 35 22-62 118-153 (353)
442 2gag_A Heterotetrameric sarcos 95.5 0.0075 2.6E-07 49.5 2.8 35 23-63 285-319 (965)
443 4gsl_A Ubiquitin-like modifier 95.5 0.021 7.3E-07 44.1 5.1 35 22-62 326-361 (615)
444 2hk9_A Shikimate dehydrogenase 95.4 0.018 6.2E-07 40.1 4.3 33 23-61 130-162 (275)
445 2rir_A Dipicolinate synthase, 95.4 0.027 9.2E-07 39.7 5.1 33 23-61 158-190 (300)
446 1ez4_A Lactate dehydrogenase; 95.4 0.023 7.9E-07 40.5 4.8 34 22-61 5-40 (318)
447 3don_A Shikimate dehydrogenase 95.4 0.016 5.5E-07 40.4 3.9 35 23-63 118-153 (277)
448 3p1w_A Rabgdi protein; GDI RAB 95.4 0.034 1.2E-06 41.9 5.9 40 131-170 256-295 (475)
449 3sx6_A Sulfide-quinone reducta 95.4 0.054 1.8E-06 40.2 7.0 25 134-158 211-235 (437)
450 3tnl_A Shikimate dehydrogenase 95.4 0.028 9.7E-07 40.0 5.1 32 23-60 155-187 (315)
451 3d0o_A L-LDH 1, L-lactate dehy 95.4 0.021 7.3E-07 40.6 4.6 33 23-61 7-41 (317)
452 3d4o_A Dipicolinate synthase s 95.4 0.028 9.6E-07 39.5 5.1 33 23-61 156-188 (293)
453 3jyo_A Quinate/shikimate dehyd 95.3 0.028 9.5E-07 39.4 5.0 33 23-61 128-161 (283)
454 4gbj_A 6-phosphogluconate dehy 95.3 0.017 5.7E-07 40.8 3.9 35 24-64 7-41 (297)
455 3ce6_A Adenosylhomocysteinase; 95.3 0.021 7.1E-07 43.2 4.6 34 23-62 275-308 (494)
456 3vku_A L-LDH, L-lactate dehydr 95.3 0.02 6.8E-07 41.0 4.3 33 23-61 10-44 (326)
457 3vh1_A Ubiquitin-like modifier 95.3 0.023 7.8E-07 43.9 4.8 34 22-61 327-361 (598)
458 3ew7_A LMO0794 protein; Q8Y8U8 95.3 0.035 1.2E-06 36.8 5.3 32 24-61 2-34 (221)
459 3gvp_A Adenosylhomocysteinase 95.3 0.023 7.9E-07 42.1 4.6 33 23-61 221-253 (435)
460 3fi9_A Malate dehydrogenase; s 95.3 0.031 1.1E-06 40.3 5.2 33 23-61 9-44 (343)
461 3dfu_A Uncharacterized protein 95.3 0.0053 1.8E-07 41.6 1.1 31 24-60 8-38 (232)
462 3d1l_A Putative NADP oxidoredu 95.3 0.025 8.4E-07 39.1 4.5 32 24-61 12-44 (266)
463 4id9_A Short-chain dehydrogena 95.2 0.032 1.1E-06 39.9 5.2 35 23-63 20-55 (347)
464 2d4a_B Malate dehydrogenase; a 95.2 0.024 8.1E-07 40.3 4.4 32 24-61 1-33 (308)
465 3q2o_A Phosphoribosylaminoimid 95.2 0.042 1.4E-06 40.2 5.9 34 23-62 15-48 (389)
466 1edz_A 5,10-methylenetetrahydr 95.2 0.023 7.7E-07 40.5 4.1 32 23-60 178-210 (320)
467 1y8q_A Ubiquitin-like 1 activa 95.2 0.024 8.2E-07 40.9 4.4 35 22-62 36-71 (346)
468 3fbt_A Chorismate mutase and s 95.2 0.029 9.8E-07 39.3 4.6 33 23-61 123-156 (282)
469 1nvt_A Shikimate 5'-dehydrogen 95.1 0.021 7E-07 40.1 3.9 32 23-61 129-160 (287)
470 2d5c_A AROE, shikimate 5-dehyd 95.1 0.033 1.1E-06 38.5 4.9 32 24-61 118-149 (263)
471 1i36_A Conserved hypothetical 95.1 0.026 8.7E-07 38.9 4.3 30 24-59 2-31 (264)
472 3pwz_A Shikimate dehydrogenase 95.1 0.038 1.3E-06 38.5 5.0 33 23-61 121-154 (272)
473 1hdo_A Biliverdin IX beta redu 95.1 0.045 1.5E-06 35.8 5.3 33 24-62 5-38 (206)
474 3o38_A Short chain dehydrogena 95.1 0.05 1.7E-06 37.4 5.7 33 23-61 23-57 (266)
475 1tt5_B Ubiquitin-activating en 95.0 0.033 1.1E-06 41.4 4.9 35 21-61 39-74 (434)
476 3b1f_A Putative prephenate deh 95.0 0.03 1E-06 39.1 4.6 34 24-61 8-41 (290)
477 3dhn_A NAD-dependent epimerase 95.0 0.028 9.7E-07 37.5 4.2 33 24-62 6-39 (227)
478 1dlj_A UDP-glucose dehydrogena 95.0 0.024 8.2E-07 41.8 4.0 31 24-61 2-32 (402)
479 3ius_A Uncharacterized conserv 95.0 0.028 9.5E-07 39.0 4.2 33 24-62 7-39 (286)
480 3o8q_A Shikimate 5-dehydrogena 95.0 0.039 1.3E-06 38.6 4.8 33 23-61 127-160 (281)
481 3h2s_A Putative NADH-flavin re 95.0 0.046 1.6E-06 36.4 5.1 31 25-61 3-34 (224)
482 3t4e_A Quinate/shikimate dehyd 95.0 0.043 1.5E-06 39.0 5.1 32 23-60 149-181 (312)
483 2dbq_A Glyoxylate reductase; D 94.9 0.048 1.7E-06 39.1 5.3 34 23-62 151-184 (334)
484 3h28_A Sulfide-quinone reducta 94.9 0.073 2.5E-06 39.4 6.4 26 134-159 203-228 (430)
485 3vps_A TUNA, NAD-dependent epi 94.8 0.046 1.6E-06 38.5 5.1 33 24-62 9-42 (321)
486 1lu9_A Methylene tetrahydromet 94.8 0.049 1.7E-06 38.1 5.2 33 23-61 120-153 (287)
487 1w4x_A Phenylacetone monooxyge 94.8 0.029 1E-06 43.0 4.3 34 23-62 187-220 (542)
488 1mld_A Malate dehydrogenase; o 94.8 0.037 1.3E-06 39.4 4.5 32 24-61 2-36 (314)
489 1leh_A Leucine dehydrogenase; 94.8 0.047 1.6E-06 39.7 5.0 33 23-61 174-206 (364)
490 1gpj_A Glutamyl-tRNA reductase 94.8 0.034 1.2E-06 41.0 4.4 33 23-61 168-201 (404)
491 1npy_A Hypothetical shikimate 94.7 0.04 1.4E-06 38.3 4.4 33 23-61 120-153 (271)
492 1yb4_A Tartronic semialdehyde 94.7 0.027 9.2E-07 39.4 3.6 32 24-62 5-36 (295)
493 2qrj_A Saccharopine dehydrogen 94.7 0.037 1.3E-06 40.5 4.2 34 22-61 214-251 (394)
494 4b4o_A Epimerase family protei 94.7 0.068 2.3E-06 37.4 5.6 34 24-63 2-36 (298)
495 2ahr_A Putative pyrroline carb 94.7 0.037 1.3E-06 38.0 4.1 32 24-61 5-36 (259)
496 2r6j_A Eugenol synthase 1; phe 94.5 0.054 1.8E-06 38.2 4.9 33 24-62 13-46 (318)
497 3orf_A Dihydropteridine reduct 94.5 0.076 2.6E-06 36.2 5.4 34 24-63 24-58 (251)
498 3h9u_A Adenosylhomocysteinase; 94.5 0.048 1.6E-06 40.5 4.6 33 23-61 212-244 (436)
499 3n58_A Adenosylhomocysteinase; 94.5 0.051 1.7E-06 40.5 4.6 33 23-61 248-280 (464)
500 2dkn_A 3-alpha-hydroxysteroid 94.4 0.081 2.8E-06 35.9 5.4 33 24-62 3-36 (255)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.87 E-value=1.1e-21 Score=150.66 Aligned_cols=162 Identities=66% Similarity=1.137 Sum_probs=109.8
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchh
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHE 98 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (182)
..+++||+|||||++|+++|+.|++.+++.+.|++|+||||.+.+++...++..+.+..+..+++.|...+..+...+..
T Consensus 32 ~~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~ 111 (584)
T 2gmh_A 32 FAEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTE 111 (584)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCE
T ss_pred cccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeech
Confidence 34568999999999999999999993222222999999999988776555666777777777777777655444322221
Q ss_pred hhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE----------
Q psy2240 99 DKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI---------- 168 (182)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v---------- 168 (182)
..+.++.......++..+.......+.+.+++..+.++|.+.+++.|++|+++++|+++..++++.+.+|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~ 191 (584)
T 2gmh_A 112 DRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKD 191 (584)
T ss_dssp EEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTT
T ss_pred hheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCC
Confidence 1111111111111111111011223467889999999999999999999999999999988666665544
Q ss_pred ------------EeCCEEEecCCC
Q psy2240 169 ------------ATGDVGIAKDGS 180 (182)
Q Consensus 169 ------------~~~~~vi~adG~ 180 (182)
...++||.|||.
T Consensus 192 G~~~~~~~~g~~i~Ad~VV~AdG~ 215 (584)
T 2gmh_A 192 GAPKTTFERGLELHAKVTIFAEGC 215 (584)
T ss_dssp SCEEEEEECCCEEECSEEEECCCT
T ss_pred CCcccccCCceEEECCEEEEeeCC
Confidence 335789999997
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.84 E-value=5.3e-21 Score=140.46 Aligned_cols=149 Identities=28% Similarity=0.361 Sum_probs=93.7
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
|.+|||+||||||+|+++|+.|++ +|++|+||||.+.++....+++.+.+..+.. ++.+... ......+...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~------~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~-l~~~~~~-~~~~~~~~~~ 73 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAK------YGLKTLMIEKRPEIGSPVRCGEGLSKGILNE-ADIKADR-SFIANEVKGA 73 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSTTCSCCSCCEEETHHHHH-TTCCCCT-TTEEEEESEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCCCCCCceecccCHHHHHH-cCCCchh-hhhhcccceE
Confidence 456999999999999999999999 8999999999987765545555554443322 2211000 0000111000
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE----------E
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI----------A 169 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v----------~ 169 (182)
. .+......... ..........++.++|..+.+.|.+.+.+.|++++++++|+++..++ +.+.++ .
T Consensus 74 ~--~~~~~~~~~~~-~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~-~~~~~v~~~~~~~~~~~ 149 (397)
T 3oz2_A 74 R--IYGPSEKRPII-LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN-GKVAGAKIRHNNEIVDV 149 (397)
T ss_dssp E--EECTTCSSCEE-EECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET-TEEEEEEEEETTEEEEE
T ss_pred E--EEeCCCceEee-ccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc-ceeeeeeecccccceEE
Confidence 0 00000000000 00011122336789999999999999999999999999999988744 444432 3
Q ss_pred eCCEEEecCCC
Q psy2240 170 TGDVGIAKDGS 180 (182)
Q Consensus 170 ~~~~vi~adG~ 180 (182)
..++||+|||.
T Consensus 150 ~a~~vIgAdG~ 160 (397)
T 3oz2_A 150 RAKMVIAADGF 160 (397)
T ss_dssp EEEEEEECCCT
T ss_pred EEeEEEeCCcc
Confidence 45899999997
No 3
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.77 E-value=1e-18 Score=134.22 Aligned_cols=152 Identities=20% Similarity=0.220 Sum_probs=89.0
Q ss_pred cccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChh--HHhhhhhhHHhc---CCCC
Q psy2240 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPI--ALNELLPDWKDL---GAPL 92 (182)
Q Consensus 18 ~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~---~~~~ 92 (182)
.+|+.+||+|||||++|+++|+.|++ .|++|+|||+.+.+.... +..+.+. .+.+.++.|... ....
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar------~G~~V~LiEr~~~~~~~~--G~~l~p~~~~~l~~lGl~~~l~~~~~~~ 90 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHK------LGHDVTIYERSAFPRYRV--GESLLPGTMSILNRLGLQEKIDAQNYVK 90 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCSSCCCC--CCBCCHHHHHHHHHTTCHHHHHHHCCEE
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHc------CCCCEEEEcCCCCCCCce--eeeECHHHHHHHHHcCCcHHHHhcCCcc
Confidence 34557899999999999999999999 899999999997554322 2222222 222222322211 1000
Q ss_pred CccchhhhHHHHHhhc--cCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCC-cEEE--
Q psy2240 93 NTPVHEDKFAYLTKSK--RIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG-SVKG-- 167 (182)
Q Consensus 93 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g-~~~~-- 167 (182)
..... +.+..... ...+......+...+..+.+++..+.+.|.+.+++.|++++++++|+++..+++. ..+.
T Consensus 91 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~ 167 (591)
T 3i3l_A 91 KPSAT---FLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVR 167 (591)
T ss_dssp ECEEE---EECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEE
T ss_pred cCCcE---EEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEe
Confidence 00000 00000000 0000000001112233678999999999999999999999999999999864222 1111
Q ss_pred ------EEeCCEEEecCCC
Q psy2240 168 ------IATGDVGIAKDGS 180 (182)
Q Consensus 168 ------v~~~~~vi~adG~ 180 (182)
....++||+|+|.
T Consensus 168 ~~G~~~~i~AdlVV~AdG~ 186 (591)
T 3i3l_A 168 RGGESVTVESDFVIDAGGS 186 (591)
T ss_dssp ETTEEEEEEESEEEECCGG
T ss_pred cCCceEEEEcCEEEECCCC
Confidence 2346889999996
No 4
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.76 E-value=1.4e-18 Score=128.79 Aligned_cols=147 Identities=21% Similarity=0.246 Sum_probs=89.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhH--HhhhhhhHHh---cCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIA--LNELLPDWKD---LGAPLNTP 95 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~ 95 (182)
.++||+|||||++|+++|+.|++ .|++|+||||.+.+.. ..+..+.+.. ..+.++.+.. ........
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~------~G~~V~v~E~~~~~~~--~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 75 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNK------SGFKVKIVEKQKFPRF--VIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFG 75 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSCSSCC--CSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECE
T ss_pred ccCcEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCCCCC--cccCcccHhHHHHHHHcCChHHHHHcCCcccCC
Confidence 35899999999999999999999 8999999999975432 1222222221 2222222221 11000000
Q ss_pred chhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE-------
Q psy2240 96 VHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI------- 168 (182)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v------- 168 (182)
.. + ........+.............+.+++..+.+.|.+.+++.|++|+++++|++++.++++..+.+
T Consensus 76 ~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~ 150 (421)
T 3nix_A 76 AK---F--VRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNK 150 (421)
T ss_dssp EE---E--EETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCE
T ss_pred cE---E--EeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCE
Confidence 00 0 00000000111101111122367899999999999999999999999999999987655543333
Q ss_pred --EeCCEEEecCCC
Q psy2240 169 --ATGDVGIAKDGS 180 (182)
Q Consensus 169 --~~~~~vi~adG~ 180 (182)
...++||.|+|.
T Consensus 151 ~~~~a~~vV~A~G~ 164 (421)
T 3nix_A 151 REIEARFIIDASGY 164 (421)
T ss_dssp EEEEEEEEEECCGG
T ss_pred EEEEcCEEEECCCC
Confidence 446889999985
No 5
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.75 E-value=4.6e-18 Score=125.10 Aligned_cols=148 Identities=27% Similarity=0.338 Sum_probs=90.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
.++||+|||||++|+++|+.|++ .|++|+|||+.+..++...++.......+ +.++.|.... ........
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~------~G~~V~l~E~~~~~g~~~~~~~~~~~~~~-~~lg~~~~~~-~~~~~~~~-- 72 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAK------YGLKTLMIEKRPEIGSPVRCGEGLSKGIL-NEADIKADRS-FIANEVKG-- 72 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSTTCSCCSCCEEETHHH-HHTTCCCCTT-TEEEEESE--
T ss_pred ccCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCCcccccccCHHHH-HHcCCCCChH-Hhhhhcce--
Confidence 46899999999999999999999 89999999999876654444443333222 2222211100 00000000
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE----------Ee
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI----------AT 170 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v----------~~ 170 (182)
+.+.......... +..........+.+++..+.+.|.+.+++.|++|+++++|++++.+ ++.+.+| ..
T Consensus 73 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~ 150 (397)
T 3cgv_A 73 ARIYGPSEKRPII-LQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVR 150 (397)
T ss_dssp EEEECTTCSSCEE-EC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEE
T ss_pred EEEEcCCCCEEEE-EeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEE
Confidence 0000000000000 0000011223678999999999999999999999999999999875 4444322 33
Q ss_pred CCEEEecCCC
Q psy2240 171 GDVGIAKDGS 180 (182)
Q Consensus 171 ~~~vi~adG~ 180 (182)
.++||+|+|.
T Consensus 151 a~~vV~A~G~ 160 (397)
T 3cgv_A 151 AKMVIAADGF 160 (397)
T ss_dssp EEEEEECCCT
T ss_pred cCEEEECCCc
Confidence 5899999996
No 6
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.75 E-value=1.1e-17 Score=126.48 Aligned_cols=147 Identities=20% Similarity=0.241 Sum_probs=93.3
Q ss_pred cccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHH--hhhhhhHHhcCCCCCcc
Q psy2240 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL--NELLPDWKDLGAPLNTP 95 (182)
Q Consensus 18 ~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 95 (182)
++.+++||+||||||+|+++|+.|++ +|++|+||||.+..... ..+..+.+..+ .+.++.+...... ..
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~~~~~-~r~~~l~~~~~~~l~~lGl~~~~~~~--~~ 77 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRL------AGVEVVVLERLVERTGE-SRGLGFTARTMEVFDQRGILPRFGEV--ET 77 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCCC-CCC-CCSEEECHHHHHHHHTTTCGGGGCSC--CB
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCC-CCcceECHHHHHHHHHCCCHHHHHhc--cc
Confidence 34567899999999999999999999 89999999999765432 22333444332 2333334333211 01
Q ss_pred chhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE--------
Q psy2240 96 VHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-------- 167 (182)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-------- 167 (182)
.....+ ....+..... ....+..+.+++..+.+.|.+.+++.|++|+++++|++++.++++..+.
T Consensus 78 ~~~~~~----~~~~~~~~~~---~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~ 150 (500)
T 2qa1_A 78 STQGHF----GGLPIDFGVL---EGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKH 150 (500)
T ss_dssp CCEEEE----TTEEEEGGGS---TTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEE
T ss_pred cccccc----cceecccccC---CCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCE
Confidence 000000 0000111000 1111125678999999999999999999999999999998866554332
Q ss_pred EEeCCEEEecCCC
Q psy2240 168 IATGDVGIAKDGS 180 (182)
Q Consensus 168 v~~~~~vi~adG~ 180 (182)
....++||+|||+
T Consensus 151 ~~~a~~vVgADG~ 163 (500)
T 2qa1_A 151 TLRAAYLVGCDGG 163 (500)
T ss_dssp EEEESEEEECCCT
T ss_pred EEEeCEEEECCCc
Confidence 2346899999997
No 7
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.75 E-value=3.6e-18 Score=129.68 Aligned_cols=149 Identities=20% Similarity=0.283 Sum_probs=88.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhH---HhhhhhhHHhcCCCCCccch
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIA---LNELLPDWKDLGAPLNTPVH 97 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 97 (182)
.++||+|||||++|+++|+.|++ +|++|+|||+.+..... .+..+.+.. +.+.++.+............
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~------~G~~V~liE~~~~~~~~--~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~ 77 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAM------RGHRVLLLEREAFPRHQ--IGESLLPATVHGICAMLGLTDEMKRAGFPIKR 77 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSCSSCCC--SCCBCCHHHHTTHHHHTTCHHHHHTTTCCEEC
T ss_pred ccCCEEEECcCHHHHHHHHHHHh------CCCCEEEEccCCCCCCC--CCcccCcchHHHHHHHhCcHHHHHHcCCcccc
Confidence 45899999999999999999999 89999999999754321 222222222 22333333221100000000
Q ss_pred hhhHHHHHhhc--cCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE--------
Q psy2240 98 EDKFAYLTKSK--RIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-------- 167 (182)
Q Consensus 98 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-------- 167 (182)
...+.+..... ...+.... .......+.+++..+.+.|.+.+++.|++|+++++|+++..++ +.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~-~~v~gv~~~~~dG 154 (512)
T 3e1t_A 78 GGTFRWGKEPEPWTFGFTRHP--DDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG-ERAVGVRYRNTEG 154 (512)
T ss_dssp EEEEECSSCSSCEEEESSSSS--SSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET-TEEEEEEEECSSS
T ss_pred CceEEecCCccccccccccCC--CCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC-CEEEEEEEEeCCC
Confidence 00000000000 00010000 1112236789999999999999999999999999999998744 43322
Q ss_pred ---EEeCCEEEecCCC
Q psy2240 168 ---IATGDVGIAKDGS 180 (182)
Q Consensus 168 ---v~~~~~vi~adG~ 180 (182)
....++||.|+|.
T Consensus 155 ~~~~i~ad~VI~AdG~ 170 (512)
T 3e1t_A 155 VELMAHARFIVDASGN 170 (512)
T ss_dssp CEEEEEEEEEEECCCT
T ss_pred CEEEEEcCEEEECCCc
Confidence 3346889999997
No 8
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.75 E-value=2.6e-17 Score=126.12 Aligned_cols=146 Identities=19% Similarity=0.195 Sum_probs=91.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChh--HHhhhhhhHHhcCCCCCccchh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPI--ALNELLPDWKDLGAPLNTPVHE 98 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 98 (182)
+++||+|||||++|+++|+.|++ .|++|+||||.+..... ..+..+.+. .+.+.++.|.............
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~------~G~~V~VlEr~~~~~~~-~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~ 120 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA------GGVGALVLEKLVEPVGH-DRAGALHIRTVETLDLRGLLDRFLEGTQVAKGL 120 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH------TTCCEEEEBSCSSCCCS-SSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEcCCCCCCCC-ceEEEECHHHHHHHHHcCChHHHHhcCcccCCc
Confidence 45899999999999999999999 89999999998765432 222333333 2333344444432111111000
Q ss_pred hhHHHHHhhc--cCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE--------E
Q psy2240 99 DKFAYLTKSK--RIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG--------I 168 (182)
Q Consensus 99 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~--------v 168 (182)
. +.... .+.... .....+..+.+++..+.+.|.+.+++.|++|+++++|++++.++++..+. .
T Consensus 121 -~---~~~~~~~~~~~~~---~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~ 193 (570)
T 3fmw_A 121 -P---FAGIFTQGLDFGL---VDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYP 193 (570)
T ss_dssp -C---BTTBCTTCCBGGG---SCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEE
T ss_pred -e---eCCcccccccccc---cCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEE
Confidence 0 00000 011111 11112235678999999999999998999999999999998766664432 3
Q ss_pred EeCCEEEecCCC
Q psy2240 169 ATGDVGIAKDGS 180 (182)
Q Consensus 169 ~~~~~vi~adG~ 180 (182)
...++||+|||.
T Consensus 194 ~~a~~vV~ADG~ 205 (570)
T 3fmw_A 194 VRARYGVGCDGG 205 (570)
T ss_dssp EEESEEEECSCS
T ss_pred EEeCEEEEcCCC
Confidence 456899999996
No 9
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.73 E-value=3.1e-17 Score=124.08 Aligned_cols=145 Identities=21% Similarity=0.251 Sum_probs=93.0
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHH--hhhhhhHHhcCCCCCccch
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL--NELLPDWKDLGAPLNTPVH 97 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 97 (182)
..++||+||||||+|+++|+.|++ +|++|+||||.+..... ..+..+.+..+ .+.++.+...... ....
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~------~G~~v~vlE~~~~~~~~-~r~~~l~~~~~~~l~~lGl~~~~~~~--~~~~ 80 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRL------GGVDVMVLEQLPQRTGE-SRGLGFTARTMEVFDQRGILPAFGPV--ETST 80 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCSSCCCC-CCSEEECHHHHHHHHHTTCGGGGCSC--CEES
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCC-CceeEECHHHHHHHHHCCCHHHHHhc--cccc
Confidence 356899999999999999999999 89999999998765432 22333444332 2333434333211 1100
Q ss_pred hhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE--------EE
Q psy2240 98 EDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG--------IA 169 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~--------v~ 169 (182)
...+ ....+..... ....+..+.+++..+.+.|.+.+++.|++|+++++|++++.++++..+. ..
T Consensus 81 ~~~~----~~~~~~~~~~---~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~ 153 (499)
T 2qa2_A 81 QGHF----GGRPVDFGVL---EGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSL 153 (499)
T ss_dssp EEEE----TTEEEEGGGS---TTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEE
T ss_pred ccee----cceecccccC---CCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEE
Confidence 0000 0000111100 1111225688999999999999999999999999999998866654432 23
Q ss_pred eCCEEEecCCC
Q psy2240 170 TGDVGIAKDGS 180 (182)
Q Consensus 170 ~~~~vi~adG~ 180 (182)
..++||+|||+
T Consensus 154 ~a~~vVgADG~ 164 (499)
T 2qa2_A 154 TTRYVVGCDGG 164 (499)
T ss_dssp EEEEEEECCCT
T ss_pred EeCEEEEccCc
Confidence 46899999997
No 10
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.71 E-value=8.4e-18 Score=128.29 Aligned_cols=144 Identities=20% Similarity=0.203 Sum_probs=90.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhH--HhhhhhhHHh---cCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIA--LNELLPDWKD---LGAPLNTP 95 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~ 95 (182)
.++||+|||||++|+++|+.|++ +|++|+||||.+...... .+..+.+.. +.+.++.+.. ........
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~------~G~~v~viEr~~~~~~~~-~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 76 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR------QGVRVLVVERRPGLSPYP-RAAGQNPRTMELLRIGGVADEVVRADDIRGTQ 76 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSSSSCCCCC-CSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTT
T ss_pred ccCcEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCCC-ccceECHHHHHHHHHcCCHHHHHhhCCCcccc
Confidence 45899999999999999999999 899999999998654322 233333332 2222332222 11111100
Q ss_pred ----------chhh-------hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeE
Q psy2240 96 ----------VHED-------KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVL 158 (182)
Q Consensus 96 ----------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~ 158 (182)
.... .+...... ... ......+.+++..+.+.|.+.+++.|++|+++++|++++
T Consensus 77 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~ 147 (535)
T 3ihg_A 77 GDFVIRLAESVRGEILRTVSESFDDMVAA----TEP-----CTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFR 147 (535)
T ss_dssp SCCEEEEESSSSSCEEEEEESCHHHHHHT----TGG-----GCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEE
T ss_pred cceeeeEEeccCCceeeeccccccccccc----ccc-----CCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEE
Confidence 0000 00000000 000 011225678999999999999999999999999999998
Q ss_pred EcCC----CcEEE--------EEeCCEEEecCCC
Q psy2240 159 YHGD----GSVKG--------IATGDVGIAKDGS 180 (182)
Q Consensus 159 ~~~~----g~~~~--------v~~~~~vi~adG~ 180 (182)
.+++ +..+. ....++||+|||.
T Consensus 148 ~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~ 181 (535)
T 3ihg_A 148 QHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGN 181 (535)
T ss_dssp EECGGGCSEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred ECCCCccccEEEEEEcCCCeEEEEeCEEEECCCC
Confidence 8665 43332 2346899999997
No 11
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.69 E-value=3.9e-18 Score=126.06 Aligned_cols=146 Identities=19% Similarity=0.174 Sum_probs=85.6
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhH--HhhhhhhHHh---cCCCCCc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIA--LNELLPDWKD---LGAPLNT 94 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~ 94 (182)
.+.+||+|||||++|+++|+.|++ +|++|+||||.+..... ..+..+.+.. +.+.++.|.. .......
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~------~G~~V~v~E~~~~~~~~-~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~ 93 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQ------SGIDCDVYEAVKEIKPV-GAAISVWPNGVKCMAHLGMGDIMETFGGPLRR 93 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSCC-----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCCCCCc-CeeEEECHHHHHHHHHCCCHHHHHhhcCCCcc
Confidence 456899999999999999999999 89999999999765421 1222233222 2222222221 1111110
Q ss_pred cchhhhHHHHHhh-cc--CCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----
Q psy2240 95 PVHEDKFAYLTKS-KR--IGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG---- 167 (182)
Q Consensus 95 ~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~---- 167 (182)
... .... .. ..++............+.+++..|.+.|.+.+.+ ++|+++++|++++.++++..+.
T Consensus 94 ~~~------~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g 165 (407)
T 3rp8_A 94 MAY------RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDG 165 (407)
T ss_dssp EEE------EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTS
T ss_pred eEE------EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCC
Confidence 000 0000 00 0000000000011236788999999999999976 8899999999998765543332
Q ss_pred -EEeCCEEEecCCC
Q psy2240 168 -IATGDVGIAKDGS 180 (182)
Q Consensus 168 -v~~~~~vi~adG~ 180 (182)
....++||+|||.
T Consensus 166 ~~~~a~~vV~AdG~ 179 (407)
T 3rp8_A 166 SSASGDLLIAADGS 179 (407)
T ss_dssp CEEEESEEEECCCT
T ss_pred CEEeeCEEEECCCc
Confidence 3456999999997
No 12
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.69 E-value=5.3e-16 Score=112.90 Aligned_cols=56 Identities=16% Similarity=0.095 Sum_probs=42.7
Q ss_pred ccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE-E-------EEeCCEEEecCCC
Q psy2240 125 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK-G-------IATGDVGIAKDGS 180 (182)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~-~-------v~~~~~vi~adG~ 180 (182)
...+++..+.+.|.+.+++.|++|+++++|++++.++++.+. . ....+.||.|.|.
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~ 207 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGL 207 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGG
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCc
Confidence 456788899999999999999999999999999886555222 1 2334667777764
No 13
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.69 E-value=7e-17 Score=119.48 Aligned_cols=147 Identities=20% Similarity=0.214 Sum_probs=82.4
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cc-c-ccChh---HHhhhhhhHHhcCCCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SG-A-VIDPI---ALNELLPDWKDLGAPLN 93 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~-~-~~~~~---~~~~~~~~~~~~~~~~~ 93 (182)
+..+||+|||||++|+++|+.|++ .|.+|+|||+.+..++... ++ + +.... .....+. .......
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~------~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~---~~~~~~~ 95 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGK------RGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLS---GNPHFCK 95 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEE---SSTTTTH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhh---cCHHHHH
Confidence 356899999999999999999999 8999999999998765432 11 1 10000 0000000 0000000
Q ss_pred c----cchhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE---
Q psy2240 94 T----PVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK--- 166 (182)
Q Consensus 94 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~--- 166 (182)
. ....+...++.... ........... .....+..+.+.|.+.+++.|++|+++++|+++..++++..+
T Consensus 96 ~~l~~~~~~~~~~~~~~~G-i~~~~~~~g~~----~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~ 170 (417)
T 3v76_A 96 SALARYRPQDFVALVERHG-IGWHEKTLGQL----FCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTS 170 (417)
T ss_dssp HHHHHSCHHHHHHHHHHTT-CCEEECSTTEE----EESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEET
T ss_pred HHHHhcCHHHHHHHHHHcC-CCcEEeeCCEE----eeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEEC
Confidence 0 00112223332221 11111111001 113456789999999999999999999999999875544322
Q ss_pred -EEEeCCEEEecCCC
Q psy2240 167 -GIATGDVGIAKDGS 180 (182)
Q Consensus 167 -~v~~~~~vi~adG~ 180 (182)
+....+.||.|+|.
T Consensus 171 ~g~i~ad~VIlAtG~ 185 (417)
T 3v76_A 171 AGTVDAASLVVASGG 185 (417)
T ss_dssp TEEEEESEEEECCCC
T ss_pred CcEEEeeEEEECCCC
Confidence 12344666666664
No 14
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.67 E-value=2.2e-16 Score=116.37 Aligned_cols=126 Identities=17% Similarity=0.176 Sum_probs=72.7
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cc--cccChh---HHhhhhhhHHhcCCCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SG--AVIDPI---ALNELLPDWKDLGAPLN 93 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~--~~~~~~---~~~~~~~~~~~~~~~~~ 93 (182)
|.++||+|||||++|+++|+.|++ +|.+|+|||+.+..++... ++ .+.... ...+.+.. . ..+.
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~------~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~---~-~~~~ 71 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAK------LGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQ---N-PHFV 71 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECS---C-TTST
T ss_pred CCCCCEEEECCcHHHHHHHHHHHh------CCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccC---C-HHHH
Confidence 456899999999999999999999 8999999999987754332 11 110000 00011100 0 0000
Q ss_pred cc-----chhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEc
Q psy2240 94 TP-----VHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYH 160 (182)
Q Consensus 94 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~ 160 (182)
.. ...+.+.++...+ ..+........+. .. ++..+.+.|.+.+++.|++++++++|+++..+
T Consensus 72 ~~~l~~~~~~~~~~~~~~~G-i~~~~~~~g~~~p---~~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~ 138 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQG-ITYHEKELGQLFC---DE-GAEQIVEMLKSECDKYGAKILLRSEVSQVERI 138 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTT-CCEEECSTTEEEE---TT-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEEC
T ss_pred HHHHHhCCHHHHHHHHHhCC-CceEECcCCEEcc---CC-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcc
Confidence 00 0111223332211 1111110000010 01 56789999999999999999999999999865
No 15
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.67 E-value=2.1e-17 Score=123.79 Aligned_cols=143 Identities=23% Similarity=0.284 Sum_probs=85.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC-CccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG-GHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
.++||+|||||++|+++|+.|++ +|++|+|||+.+.+. +...++..+....+ +.++.+............
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~------~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l-~~lg~~~~~~~~~~~~~~-- 75 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSR------RGLKILLVDSKPWNRIGDKPCGDAVSKAHF-DKLGMPYPKGEELENKIN-- 75 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSS------SSCCEEEECSSCGGGTTCSCCCCEEEHHHH-HHTTCCCCCGGGEEEEEE--
T ss_pred CcCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCCcccccccccHHHH-HHhcCCCCchHHHHhhhc--
Confidence 46899999999999999999999 899999999987642 22223332322222 111111000000000000
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE------------
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG------------ 167 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~------------ 167 (182)
.+..+..... ...+ .....+.+++..+.+.|.+.+.+.|++++++++|+++..++ +.+.+
T Consensus 76 ~~~~~~~~~~------~~~~-~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~-~~v~gv~~~~~~~G~~~ 147 (453)
T 3atr_A 76 GIKLYSPDMQ------TVWT-VNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED-GYVKGAVLFNRRTNEEL 147 (453)
T ss_dssp EEEEECTTSS------CEEE-EEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTTEEE
T ss_pred ceEEECCCCc------eEEe-ECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC-CEEEEEEEEEcCCCceE
Confidence 0000000000 0000 01125678999999999999998999999999999998744 33321
Q ss_pred EEeCCEEEecCCC
Q psy2240 168 IATGDVGIAKDGS 180 (182)
Q Consensus 168 v~~~~~vi~adG~ 180 (182)
....++||+|||.
T Consensus 148 ~~~ad~VV~AdG~ 160 (453)
T 3atr_A 148 TVYSKVVVEATGY 160 (453)
T ss_dssp EEECSEEEECCGG
T ss_pred EEEcCEEEECcCC
Confidence 3456899999996
No 16
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.67 E-value=6.6e-16 Score=117.21 Aligned_cols=44 Identities=34% Similarity=0.493 Sum_probs=39.7
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
++.++||||||+|++|+++|+.|++ .|.+|+||||.+..+|.+.
T Consensus 38 ~~~~~DVvVVGaG~AGl~AA~~aa~------~G~~V~vlEk~~~~GG~s~ 81 (510)
T 4at0_A 38 WDYEADVVVAGYGIAGVAASIEAAR------AGADVLVLERTSGWGGATA 81 (510)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTTGG
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCCCCcch
Confidence 4567999999999999999999999 8999999999998887653
No 17
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.66 E-value=2.8e-16 Score=120.16 Aligned_cols=150 Identities=19% Similarity=0.186 Sum_probs=87.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHH--hhhhhhHHh---cCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL--NELLPDWKD---LGAPLNTP 95 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~ 95 (182)
.++||+|||||++|+++|+.|++ +|++|+||||.+..+... .+..+.+..+ .+.++.+.. ........
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~------~G~~V~vlEr~~~~~~~~-~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~ 97 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAH------RQVGHLVVEQTDGTITHP-RVGTIGPRSMELFRRWGVAKQIRTAGWPGDHP 97 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCSCCSSC-CCCEECHHHHHHHHHTTCHHHHHTSSCCTTSB
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCCC-ceeeeCHHHHHHHHHcCChHHHHhhcCCcccc
Confidence 46899999999999999999999 899999999997664322 2333433332 222232222 11111100
Q ss_pred chhhhHHHHHhh--ccCCCCCCC---CCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE---
Q psy2240 96 VHEDKFAYLTKS--KRIGIPILP---GMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG--- 167 (182)
Q Consensus 96 ~~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~--- 167 (182)
.....+...... ..+..+... .........+.+++..+.+.|.+.+++. |+++++|++++.++++..+.
T Consensus 98 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~ 174 (549)
T 2r0c_A 98 LDAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITD 174 (549)
T ss_dssp CCEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEE
T ss_pred cceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEE
Confidence 000000000000 001111000 0001122346788999999999999876 99999999998866654332
Q ss_pred -------EEeCCEEEecCCC
Q psy2240 168 -------IATGDVGIAKDGS 180 (182)
Q Consensus 168 -------v~~~~~vi~adG~ 180 (182)
....++||+|||.
T Consensus 175 ~~~G~~~~i~a~~vVgADG~ 194 (549)
T 2r0c_A 175 LRTGATRAVHARYLVACDGA 194 (549)
T ss_dssp TTTCCEEEEEEEEEEECCCT
T ss_pred CCCCCEEEEEeCEEEECCCC
Confidence 2345899999997
No 18
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.65 E-value=5.3e-16 Score=115.97 Aligned_cols=145 Identities=21% Similarity=0.316 Sum_probs=80.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cccc--c-----ChhHHhhhhhhHHhcCCC-
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAV--I-----DPIALNELLPDWKDLGAP- 91 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~--~-----~~~~~~~~~~~~~~~~~~- 91 (182)
+++||+|||||++|+++|+.|++ .|.+|+||||.+..++... +++. . ....+...+.........
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~------~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAE------EGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSA 98 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHH------CCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHH
Confidence 45899999999999999999999 8999999999987765332 1111 0 011111111100000000
Q ss_pred CCccchhhhHHHHHhhccCCCCCCCCCCCCCCCcccc----chHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE
Q psy2240 92 LNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVV----RLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG 167 (182)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~ 167 (182)
+......+.+.|+.... ..+... ..+..+ ....+.+.|.+.+++.|++|+++++|+++..++ +.+++
T Consensus 99 ~~~~~~~~~~~~~~~~G-~~~~~~-------~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~ 169 (447)
T 2i0z_A 99 FSIFNNEDIITFFENLG-VKLKEE-------DHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKA 169 (447)
T ss_dssp HHHSCHHHHHHHHHHTT-CCEEEC-------GGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEE
T ss_pred HHhcCHHHHHHHHHhcC-CceEEe-------eCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEE
Confidence 00000112233332211 111110 001112 357889999999999999999999999998643 44333
Q ss_pred E-------EeCCEEEecCCC
Q psy2240 168 I-------ATGDVGIAKDGS 180 (182)
Q Consensus 168 v-------~~~~~vi~adG~ 180 (182)
| ...+.||.|+|.
T Consensus 170 V~~~~G~~i~Ad~VVlAtGg 189 (447)
T 2i0z_A 170 VILQTGEVLETNHVVIAVGG 189 (447)
T ss_dssp EEETTCCEEECSCEEECCCC
T ss_pred EEECCCCEEECCEEEECCCC
Confidence 3 234556655554
No 19
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.65 E-value=1.4e-15 Score=111.43 Aligned_cols=156 Identities=19% Similarity=0.228 Sum_probs=87.3
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cccccChhH-------H----hhhhhhHH
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVIDPIA-------L----NELLPDWK 86 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~~~~~-------~----~~~~~~~~ 86 (182)
.+.++||+|||||++|+++|+.|++ +|.+|+|||+....++.+. +++.+.+.. . ......|.
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~------~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 87 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAK------ENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYK 87 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTT
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHH
Confidence 3456899999999999999999999 8999999999876554432 223222111 0 00011111
Q ss_pred h--------cCCCCC--c--cc----hhhhHHHHHhhccC-C------------CCCCCC---CCCCCCCccccchHHHH
Q psy2240 87 D--------LGAPLN--T--PV----HEDKFAYLTKSKRI-G------------IPILPG---MPMNNHGNYVVRLGHVV 134 (182)
Q Consensus 87 ~--------~~~~~~--~--~~----~~~~~~~~~~~~~~-~------------~~~~~~---~~~~~~~~~~~~~~~l~ 134 (182)
. .+.... . .+ .......+...... . .+.+.. ...+.+....+++..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (382)
T 1ryi_A 88 GLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVC 167 (382)
T ss_dssp THHHHHHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHH
T ss_pred HHHHHHHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHH
Confidence 0 011110 0 00 01111111110000 0 010000 00112234577888999
Q ss_pred HHHHHHHHHcCcEEecCCccceeEEcCCCcEE----EEEeCCEEEecCCC
Q psy2240 135 KWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK----GIATGDVGIAKDGS 180 (182)
Q Consensus 135 ~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~----~v~~~~~vi~adG~ 180 (182)
+.|.+.+++.|++++++++|+++..++++..+ +....+.||.|+|.
T Consensus 168 ~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~ 217 (382)
T 1ryi_A 168 KAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSGDVWANHVVVASGV 217 (382)
T ss_dssp HHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTEEEEEEEEEECCGG
T ss_pred HHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCceEEcCEEEECCCh
Confidence 99999999999999999999999874443311 12345677777775
No 20
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.65 E-value=2.7e-15 Score=110.51 Aligned_cols=153 Identities=20% Similarity=0.214 Sum_probs=85.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC--Cccc-cccccC----h----hHHhhhhhhHHh--
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG--GHIL-SGAVID----P----IALNELLPDWKD-- 87 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~--g~~~-~~~~~~----~----~~~~~~~~~~~~-- 87 (182)
..+||+|||||++|+++|+.|++ +|.+|+||||.+..+ +.+. ..+.+. . ....+.+..|..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~------~G~~V~vlE~~~~~~~~gas~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 76 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAE------RGHRVLVLERHTFFNENGGTSGAERHWRLQYTQEDLFRLTLETLPLWRALE 76 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCTTCSSSSCCSSEEEECSCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCCCCCCCCCCcCeEEEeccCcchhhhHHHHHHHHHHHHH
Confidence 35899999999999999999999 899999999987654 3332 111110 0 111111222221
Q ss_pred --cCCCCCc----------------cchhhhHHHHHhhccCCCCC---------CCCC-------CCCCCCccccchHHH
Q psy2240 88 --LGAPLNT----------------PVHEDKFAYLTKSKRIGIPI---------LPGM-------PMNNHGNYVVRLGHV 133 (182)
Q Consensus 88 --~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~---------~~~~-------~~~~~~~~~~~~~~l 133 (182)
....... ........+.... ...... ++.. ..+.+....+++..+
T Consensus 77 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~ 155 (397)
T 2oln_A 77 SRCERRLIHEIGSLWFGDTDVVTNEGQISGTAAMMDKL-SVRYEWLKATDIERRFGFRGLPRDYEGFLQPDGGTIDVRGT 155 (397)
T ss_dssp HHHTCCCEECCCEEEEECSSCCBTTBCHHHHHHHHHHT-TCCCEEEEHHHHHHHHCCCSCCTTCEEEEETTCEEEEHHHH
T ss_pred HHhCccHHHHCCcEEEcCCCccchhHHHHHHHHHHHHc-CCCceecCHHHHHhhCcCccCCCceeEEEcCCCCEEcHHHH
Confidence 1111100 0001111111111 111100 0000 011223457788899
Q ss_pred HHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCCEEEecCCC
Q psy2240 134 VKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGDVGIAKDGS 180 (182)
Q Consensus 134 ~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~~vi~adG~ 180 (182)
.+.|.+.+++.|++|+++++|++|+.++++..+. ...++.||.|+|.
T Consensus 156 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g~i~a~~VV~A~G~ 206 (397)
T 2oln_A 156 LAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRGTYRAGKVVLACGP 206 (397)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSCEEEEEEEEECCGG
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCCEEEcCEEEEcCCc
Confidence 9999999999999999999999998755432221 2234667777764
No 21
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.65 E-value=4.1e-15 Score=114.18 Aligned_cols=140 Identities=21% Similarity=0.283 Sum_probs=82.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cccccCh--hH----------HhhhhhhHHh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVIDP--IA----------LNELLPDWKD 87 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~~~--~~----------~~~~~~~~~~ 87 (182)
.++||+|||||++|+++|+.|++ .|.+|+||||.+..++.+. +++.+.. .. ....+..+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~------~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~ 193 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKK------AGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMK 193 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------HTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHH
Confidence 56899999999999999999999 7999999999998877653 3322211 01 1111222222
Q ss_pred cCCCCCccc--------hhhhHHHHHhhccCCCCCC---CCCCC---CCCCccccchHHHHHHHHHHHHHcCcEEecCCc
Q psy2240 88 LGAPLNTPV--------HEDKFAYLTKSKRIGIPIL---PGMPM---NNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIP 153 (182)
Q Consensus 88 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~ 153 (182)
......... ....+.|+... ...+..+ ..... ..+....+.+..+.+.|.+.+++.|++|+++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~-Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~ 272 (566)
T 1qo8_A 194 GGRQQNDIKLVTILAEQSADGVQWLESL-GANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSR 272 (566)
T ss_dssp HTTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEE
T ss_pred hcCCCCCHHHHHHHHhccHHHHHHHHhc-CCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCE
Confidence 221111110 11223344332 1222111 00000 001111245778999999999999999999999
Q ss_pred cceeEEcCCCcEEE
Q psy2240 154 ASEVLYHGDGSVKG 167 (182)
Q Consensus 154 v~~i~~~~~g~~~~ 167 (182)
|++|..++++.+.+
T Consensus 273 v~~l~~~~~g~v~G 286 (566)
T 1qo8_A 273 VVKLVVNDDHSVVG 286 (566)
T ss_dssp EEEEEECTTSBEEE
T ss_pred EEEEEECCCCcEEE
Confidence 99998754355544
No 22
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.64 E-value=6.3e-17 Score=119.28 Aligned_cols=147 Identities=16% Similarity=0.100 Sum_probs=87.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhH--HhhhhhhHHhcCCCCCccchhh
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIA--LNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
++||+|||||++|+++|+.|++ .|++|+||||.+.... ...+..+.+.. ..+.++.+...... ......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~------~G~~V~viE~~~~~~~-~~~~~~l~~~~~~~l~~~g~~~~~~~~-~~~~~~- 76 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR------QGHRVVVVEQARRERA-INGADLLKPAGIRVVEAAGLLAEVTRR-GGRVRH- 76 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCCC----CCCCEECHHHHHHHHHTTCHHHHHHT-TCEEEC-
T ss_pred cCCEEEECcCHHHHHHHHHHHh------CCCcEEEEeCCCCCCc-cCceeeECchHHHHHHHcCcHHHHHHh-CCCcce-
Confidence 5799999999999999999999 8999999999875421 12222333322 22222222221000 000000
Q ss_pred hHHHHHhhc--cCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHc-CcEEecCCccceeEEcCCCc--EEE-----EE
Q psy2240 100 KFAYLTKSK--RIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGS--VKG-----IA 169 (182)
Q Consensus 100 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~g~--~~~-----v~ 169 (182)
+.++.... ...++. .... .....+.+++..+.+.|.+.+++. |++|+++++|++++.++++. .+. ..
T Consensus 77 -~~~~~~~g~~~~~~~~-~~~~-~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~ 153 (399)
T 2x3n_A 77 -ELEVYHDGELLRYFNY-SSVD-ARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVL 153 (399)
T ss_dssp -EEEEEETTEEEEEEET-TSSC-GGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred -eEEEeCCCCEEEecch-HHhc-ccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEE
Confidence 00000000 000000 0000 111246789999999999999987 89999999999998766554 231 33
Q ss_pred eCCEEEecCCC
Q psy2240 170 TGDVGIAKDGS 180 (182)
Q Consensus 170 ~~~~vi~adG~ 180 (182)
..++||+|||.
T Consensus 154 ~ad~vV~AdG~ 164 (399)
T 2x3n_A 154 RPRVVVGADGI 164 (399)
T ss_dssp EEEEEEECCCT
T ss_pred ECCEEEECCCC
Confidence 45899999997
No 23
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.64 E-value=3.9e-15 Score=109.04 Aligned_cols=153 Identities=16% Similarity=0.272 Sum_probs=87.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cccccCh----h----HHhhhhhhHHhc---
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVIDP----I----ALNELLPDWKDL--- 88 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~~~----~----~~~~~~~~~~~~--- 88 (182)
.++||+|||||++|+++|++|++ +|.+|+|||+....++.+. +++.+.+ . ........|...
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~------~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 77 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAK------RGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEE 77 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999 8999999999864443332 2222211 0 111111222211
Q ss_pred -CCCC--Cccc----hhhhHHHHH------hhccCCC------------CCCC--CC--CCCCCCccccchHHHHHHHHH
Q psy2240 89 -GAPL--NTPV----HEDKFAYLT------KSKRIGI------------PILP--GM--PMNNHGNYVVRLGHVVKWLGE 139 (182)
Q Consensus 89 -~~~~--~~~~----~~~~~~~~~------~~~~~~~------------~~~~--~~--~~~~~~~~~~~~~~l~~~l~~ 139 (182)
+..+ ...+ .......+. ....... +.+. .. ..+.+....+++..+.+.|.+
T Consensus 78 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 157 (382)
T 1y56_B 78 YGFSFKQTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAV 157 (382)
T ss_dssp HTCCEECCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHH
T ss_pred hCCCeeccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHH
Confidence 1000 0000 011111100 0001111 1110 00 011233456788999999999
Q ss_pred HHHHcCcEEecCCccceeEEcCCCcEEEE------EeCCEEEecCCC
Q psy2240 140 QAEAMGVEIYPGIPASEVLYHGDGSVKGI------ATGDVGIAKDGS 180 (182)
Q Consensus 140 ~~~~~gv~i~~~~~v~~i~~~~~g~~~~v------~~~~~vi~adG~ 180 (182)
.+++.|++|+++++|++++.++ +.+.++ ...+.||.|+|.
T Consensus 158 ~~~~~Gv~i~~~~~v~~i~~~~-~~v~gv~~~~g~i~a~~VV~A~G~ 203 (382)
T 1y56_B 158 KAKEYGAKLLEYTEVKGFLIEN-NEIKGVKTNKGIIKTGIVVNATNA 203 (382)
T ss_dssp HHHHTTCEEECSCCEEEEEESS-SBEEEEEETTEEEECSEEEECCGG
T ss_pred HHHHCCCEEECCceEEEEEEEC-CEEEEEEECCcEEECCEEEECcch
Confidence 9999999999999999998744 444433 345778888775
No 24
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.64 E-value=1.3e-14 Score=106.91 Aligned_cols=173 Identities=20% Similarity=0.246 Sum_probs=93.4
Q ss_pred CCcCCCCCCCccccccccccccccEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCCCCCCccc-cccccCh---
Q psy2240 1 MLSFGSSKSDQFDVDMERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAAEVGGHIL-SGAVIDP--- 75 (182)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~~~~g~~~-~~~~~~~--- 75 (182)
|..+.+....|....++ .+.++||+|||||++|+++|++|++. +| .+|+|||+.+..++.+. +.+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~dVvIIG~G~~Gl~~A~~La~~-----~G~~~V~vlE~~~~~~gas~~~~g~~~~~~~ 74 (405)
T 2gag_B 1 MADLLPEHPEFLWANPE-PKKSYDAIIVGGGGHGLATAYFLAKN-----HGITNVAVLEKGWLAGGNMARNTTIIRSNYL 74 (405)
T ss_dssp --CCCCCCCSCCCCCCC-CCSEEEEEEECCSHHHHHHHHHHHHH-----HCCCCEEEECSSSTTCSGGGTSCCCBCCCCS
T ss_pred CccccccCccceecCCC-CCCcCCEEEECcCHHHHHHHHHHHHh-----cCCCcEEEEeCCCCCCCcccccCceeeecCC
Confidence 33445555556322221 24568999999999999999999972 37 89999999985544432 2222211
Q ss_pred -----hHHhhhhhhHHh----cCCC--CCc--cc----hhhhHHHHH------hhccCCC------------CCCC----
Q psy2240 76 -----IALNELLPDWKD----LGAP--LNT--PV----HEDKFAYLT------KSKRIGI------------PILP---- 116 (182)
Q Consensus 76 -----~~~~~~~~~~~~----~~~~--~~~--~~----~~~~~~~~~------~~~~~~~------------~~~~---- 116 (182)
......+..|.. .+.. +.. .+ .......+. ....... +.+.
T Consensus 75 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~ 154 (405)
T 2gag_B 75 WDESAGIYEKSLKLWEQLPEDLEYDFLFSQRGVLNLAHTLGDVRESVRRVEANKLNGVDAEWLDPSQVKEACPIINTSDD 154 (405)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCCCCCBCCCEEEEECSHHHHHHHHHHHHHHHTBTCCCEEECHHHHHHHCTTSCCSTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCcCEecccEEEEEcCHHHHHHHHHHHHHHHhcCCCceEeCHHHHHhhCCCCccccc
Confidence 111111122221 1111 000 00 001111100 0111111 1000
Q ss_pred ---C--CCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEEEe------CCEEEecCCC
Q psy2240 117 ---G--MPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIAT------GDVGIAKDGS 180 (182)
Q Consensus 117 ---~--~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v~~------~~~vi~adG~ 180 (182)
. ...+.+....+++..+.+.|.+.+++.|++++++++|+++..+ ++.++++.+ .+.||.|+|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~a~~vV~a~G~ 228 (405)
T 2gag_B 155 IRYPVMGATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRGTIHAGKVALAGAG 228 (405)
T ss_dssp SSSCCCEEEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTCCEEEEEEEECCGG
T ss_pred ccccceeEEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCceEECCEEEECCch
Confidence 0 0011223456788899999999999999999999999999874 344444433 4667777774
No 25
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.64 E-value=1.3e-15 Score=111.67 Aligned_cols=140 Identities=24% Similarity=0.240 Sum_probs=85.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhH--HhhhhhhHHhc---CCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIA--LNELLPDWKDL---GAPLNTP 95 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~ 95 (182)
..+||+|||||++|+++|+.|++ .|++|+||||.+..+.. ..+..+.+.. ..+.++.+... .......
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~------~G~~v~viE~~~~~~~~-~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~ 82 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQ------NGWDVRLHEKSSELRAF-GAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTY 82 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSCCCC-SSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCCCCCC-CceEEeCccHHHHHHHcCCHHHHHhhCCCccce
Confidence 35799999999999999999999 89999999998766532 1222222222 12222222221 1111000
Q ss_pred chhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE----EEEeC
Q psy2240 96 VHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK----GIATG 171 (182)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~----~v~~~ 171 (182)
. ++.. +.. +.. .+......+.+++..+.+.|.+.+++.|++|+++++|++++. ++.+. .....
T Consensus 83 ~------~~~~-g~~-~~~---~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~~v~~~~g~~~~a 149 (379)
T 3alj_A 83 E------TWMH-NKS-VSK---ETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VGRLTLQTGEVLEA 149 (379)
T ss_dssp E------EEET-TEE-EEE---ECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TTEEEETTSCEEEC
T ss_pred E------EEeC-Cce-eee---ccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CCEEEECCCCEEEc
Confidence 0 0000 000 000 000011257889999999999999999999999999999875 33211 13457
Q ss_pred CEEEecCCC
Q psy2240 172 DVGIAKDGS 180 (182)
Q Consensus 172 ~~vi~adG~ 180 (182)
++||+|||.
T Consensus 150 d~vV~AdG~ 158 (379)
T 3alj_A 150 DLIVGADGV 158 (379)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999999997
No 26
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.64 E-value=5.1e-15 Score=110.35 Aligned_cols=154 Identities=16% Similarity=0.253 Sum_probs=89.2
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCCCCCcccccc---cc--------Ch------hHHhhh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAEVGGHILSGA---VI--------DP------IALNEL 81 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~~~g~~~~~~---~~--------~~------~~~~~~ 81 (182)
..++||+|||||++|+++|++|++ +|. +|+||||.+..++.+.... .+ .. ......
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~------~G~~~V~vlE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 77 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLAR------RGYTNVTVLDPYPVPSAISAGNDVNKVISSGQYSNNKDEIEVNEILAEEA 77 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHH------TTCCCEEEEESSCSSCTTCTTCSSCEEECCCCSCCCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHH------cCCCcEEEEeCCCCCCCCccCCCCccEEEeccCCchhhhcchhHHHHHHH
Confidence 456899999999999999999999 899 9999999987665432110 00 01 122222
Q ss_pred hhhHHhcCCC---CC-----c-cchhhhHHHHHhh----ccCCC-------------CC-C-C-CC----CCCCCCc-cc
Q psy2240 82 LPDWKDLGAP---LN-----T-PVHEDKFAYLTKS----KRIGI-------------PI-L-P-GM----PMNNHGN-YV 127 (182)
Q Consensus 82 ~~~~~~~~~~---~~-----~-~~~~~~~~~~~~~----~~~~~-------------~~-~-~-~~----~~~~~~~-~~ 127 (182)
+..|...... +. . .........+... ..... +. + . .+ ..+.+.. ..
T Consensus 78 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~p~~l~~~~~~g~~g~~~~~~~g~ 157 (438)
T 3dje_A 78 FNGWKNDPLFKPYYHDTGLLMSACSQEGLDRLGVRVRPGEDPNLVELTRPEQFRKLAPEGVLQGDFPGWKGYFARSGAGW 157 (438)
T ss_dssp HHHHHHCTTTGGGEECCCEEEEECSHHHHHHHHHHHCGGGCTTCEEECSHHHHHTTSCTTTSCSCCTTCEEEEESSSCEE
T ss_pred HHHHhhCccccCcEeccceEEEecCcchHHHHHHHHhhcccCCceecCCHHHHHHhCCcccccCCCCCceEEEeCCCCEE
Confidence 3344432100 00 0 0011111111110 00111 10 0 0 00 1122234 67
Q ss_pred cchHHHHHHHHHHHHHcCcEEecCC---ccceeEEcCCCcEEEE-------EeCCEEEecCCC
Q psy2240 128 VRLGHVVKWLGEQAEAMGVEIYPGI---PASEVLYHGDGSVKGI-------ATGDVGIAKDGS 180 (182)
Q Consensus 128 ~~~~~l~~~l~~~~~~~gv~i~~~~---~v~~i~~~~~g~~~~v-------~~~~~vi~adG~ 180 (182)
+++..+.+.|.+.+++.|++|++++ +|++|..+ ++.+.+| +.++.||.|.|+
T Consensus 158 ~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~ 219 (438)
T 3dje_A 158 AHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGA 219 (438)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGG
T ss_pred ecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCC
Confidence 7888999999999999999999999 99999874 4445433 335667777664
No 27
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.63 E-value=9.4e-15 Score=114.53 Aligned_cols=154 Identities=14% Similarity=0.094 Sum_probs=86.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCC-ccc-cccccChh------HH--------hhhhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGG-HIL-SGAVIDPI------AL--------NELLPD 84 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g-~~~-~~~~~~~~------~~--------~~~~~~ 84 (182)
.++||+|||||++|+++|+.|++ +|.+|+|||+...+++ .+. +++.+.+. .+ ......
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~------~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~a~~~ 336 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQR------RGAVVTLYCADAQPAQGASGNRQGALYPLLNGKNDALETFFTSAFTFARRQ 336 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHT------TTCCEEEEESSSSTTCSGGGCSCEEECCCCCSSCSHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHH------CCCcEEEEeCCCccccccccccCCEEecCCCCCChHHHHHHHHHHHHHHHH
Confidence 35899999999999999999999 8999999999865553 222 22222110 01 011122
Q ss_pred HHhc---CCCCCc--------cchhhhHHHHHhhc--cCCCC---CC-----------CC--CCCCCCCccccchHHHHH
Q psy2240 85 WKDL---GAPLNT--------PVHEDKFAYLTKSK--RIGIP---IL-----------PG--MPMNNHGNYVVRLGHVVK 135 (182)
Q Consensus 85 ~~~~---~~~~~~--------~~~~~~~~~~~~~~--~~~~~---~~-----------~~--~~~~~~~~~~~~~~~l~~ 135 (182)
|... +..... .........+.... ..... .+ .. ...+.+....+++..+.+
T Consensus 337 ~~~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~ 416 (689)
T 3pvc_A 337 YDQLLEQGIAFDHQWCGVSQLAFDDKSRGKIEKMLHTQWPVEFAEAMSREQLSELAGLDCAHDGIHYPAGGWLCPSDLTH 416 (689)
T ss_dssp HHHHHHTTCCCCEECCCEEEECCSHHHHHHHHHHTTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHH
T ss_pred HHHhhhhccccccccCceEEeccCHHHHHHHHHHHhcCCChHHhhccCHHHHHHhcCCCcccceEEecCCeEECHHHHHH
Confidence 2211 111100 00111111111111 11110 00 00 001223355678899999
Q ss_pred HHHHHHHHcCcEEecCCccceeEEcCCCcEEE------EEeCCEEEecCCC
Q psy2240 136 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG------IATGDVGIAKDGS 180 (182)
Q Consensus 136 ~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~------v~~~~~vi~adG~ 180 (182)
.|.+.+++.|++|+++++|++|+.+++++.+. ....+.||.|.|.
T Consensus 417 aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~ 467 (689)
T 3pvc_A 417 ALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGH 467 (689)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGG
T ss_pred HHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCc
Confidence 99999999999999999999998865553221 1234566666664
No 28
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.63 E-value=1.5e-14 Score=109.97 Aligned_cols=150 Identities=15% Similarity=0.182 Sum_probs=83.0
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccc------cccChh-HHh---hhhhhHHhcC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSG------AVIDPI-ALN---ELLPDWKDLG 89 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~------~~~~~~-~~~---~~~~~~~~~~ 89 (182)
...+||+|||||++|+++|+.|++ .|++|+|||+.+..++..... ....+. ... .-...|....
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~------~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgk 178 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQ------MGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGK 178 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHH------TTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCc
Confidence 345799999999999999999999 899999999987653221100 000000 000 0000010000
Q ss_pred C--CCCc--cchhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcE
Q psy2240 90 A--PLNT--PVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSV 165 (182)
Q Consensus 90 ~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~ 165 (182)
. .... ......+.++.... ...... +... +.........+.+.|.+.+++.|++|+++++|+++..+ ++.+
T Consensus 179 l~~~i~~~~~~~~~v~~~~~~~G-~~~~i~--~~~~-p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v 253 (549)
T 3nlc_A 179 LYSQVKDPNFYGRKVITEFVEAG-APEEIL--YVSK-PHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQI 253 (549)
T ss_dssp CCCCSCCTTCHHHHHHHHHHHTT-CCGGGG--TBSS-CCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBE
T ss_pred eEEEeccccccHHHHHHHHHHcC-CCceEe--eccc-cccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEE
Confidence 0 0000 00112222222211 111110 0001 11223455678999999999999999999999999874 4444
Q ss_pred EEE-------EeCCEEEecCCC
Q psy2240 166 KGI-------ATGDVGIAKDGS 180 (182)
Q Consensus 166 ~~v-------~~~~~vi~adG~ 180 (182)
.++ ...+.||.|+|+
T Consensus 254 ~gV~l~~G~~i~Ad~VVlA~G~ 275 (549)
T 3nlc_A 254 TGVTLSNGEEIKSRHVVLAVGH 275 (549)
T ss_dssp EEEEETTSCEEECSCEEECCCT
T ss_pred EEEEECCCCEEECCEEEECCCC
Confidence 443 345778888887
No 29
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.63 E-value=2e-14 Score=112.54 Aligned_cols=154 Identities=16% Similarity=0.120 Sum_probs=87.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCC-ccc-cccccCh------hHHh--------hhhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGG-HIL-SGAVIDP------IALN--------ELLPD 84 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g-~~~-~~~~~~~------~~~~--------~~~~~ 84 (182)
..+||+|||||++|+++|+.|++ +|.+|+||||...+++ .+. +++.+.+ ..+. .....
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~------~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLR------RGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRF 344 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHH
Confidence 34899999999999999999999 8999999999765553 222 2222211 1111 11222
Q ss_pred HHhcCCCCCc--------cchhhhHHHHHh--hccCCCC---CC-----------CC--CCCCCCCccccchHHHHHHHH
Q psy2240 85 WKDLGAPLNT--------PVHEDKFAYLTK--SKRIGIP---IL-----------PG--MPMNNHGNYVVRLGHVVKWLG 138 (182)
Q Consensus 85 ~~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~---~~-----------~~--~~~~~~~~~~~~~~~l~~~l~ 138 (182)
|...+..... .........+.. ...+... .+ .. ...+.+....+++..+...|.
T Consensus 345 ~~~l~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~ 424 (676)
T 3ps9_A 345 YDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVL 424 (676)
T ss_dssp HHHCCSCCCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHH
T ss_pred HHHCCCCcCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHH
Confidence 3333221110 001111111111 1111111 00 00 011223355778899999999
Q ss_pred HHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCCEEEecCCC
Q psy2240 139 EQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGDVGIAKDGS 180 (182)
Q Consensus 139 ~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi~adG~ 180 (182)
+.+++.|++|+++++|++|..+++++.+. ....+.||.|+|.
T Consensus 425 ~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~ 471 (676)
T 3ps9_A 425 ELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGH 471 (676)
T ss_dssp HHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGG
T ss_pred HHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCc
Confidence 99999999999999999998755442211 1233667777664
No 30
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.62 E-value=2.4e-14 Score=110.09 Aligned_cols=139 Identities=27% Similarity=0.372 Sum_probs=80.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cccccCh--hH----------HhhhhhhHHhc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVIDP--IA----------LNELLPDWKDL 88 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~~~--~~----------~~~~~~~~~~~ 88 (182)
++||+|||||++|+++|+.|++ .|.+|+||||.+..++.+. +++.+.. .. ....+..+...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~------~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 199 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATD------SGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKG 199 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHh
Confidence 6899999999999999999999 8999999999998877653 3322210 01 11111111111
Q ss_pred CCCCCccc--------hhhhHHHHHhhccCCCCCC---CCCCCC---CCCccccchHHHHHHHHHHHHHcCcEEecCCcc
Q psy2240 89 GAPLNTPV--------HEDKFAYLTKSKRIGIPIL---PGMPMN---NHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPA 154 (182)
Q Consensus 89 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v 154 (182)
+....+.. ....+.|+... ...+... ...... ........+..+.+.|.+.+++.|++|+++++|
T Consensus 200 g~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v 278 (571)
T 1y0p_A 200 GQNINDPALVKVLSSHSKDSVDWMTAM-GADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRG 278 (571)
T ss_dssp TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEE
T ss_pred cCCCCCHHHHHHHHHccHHHHHHHHhc-CCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEe
Confidence 11111110 11223333321 1222110 000000 000111345789999999999999999999999
Q ss_pred ceeEEcCCCcEEE
Q psy2240 155 SEVLYHGDGSVKG 167 (182)
Q Consensus 155 ~~i~~~~~g~~~~ 167 (182)
++|..++++++.+
T Consensus 279 ~~l~~~~~g~v~G 291 (571)
T 1y0p_A 279 IEVLKDDKGTVKG 291 (571)
T ss_dssp EEEEECTTSCEEE
T ss_pred eEeEEcCCCeEEE
Confidence 9998755365543
No 31
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.62 E-value=1.3e-14 Score=106.48 Aligned_cols=152 Identities=22% Similarity=0.266 Sum_probs=86.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC--Cccc-cccccC---------hhHHhhhhhhHHhc-
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG--GHIL-SGAVID---------PIALNELLPDWKDL- 88 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~--g~~~-~~~~~~---------~~~~~~~~~~~~~~- 88 (182)
++||+|||||++|+++|++|++ +|.+|+|||+....+ +.+. +.+.+. .....+....|...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~------~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~ 76 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAK------QGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELE 76 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHH
Confidence 5799999999999999999999 899999999987655 4332 111111 01111222222221
Q ss_pred ---CCCCCcc-----c----h----hhhHHHHHhhccCCCCCC---------CCC-------CCCCCCccccchHHHHHH
Q psy2240 89 ---GAPLNTP-----V----H----EDKFAYLTKSKRIGIPIL---------PGM-------PMNNHGNYVVRLGHVVKW 136 (182)
Q Consensus 89 ---~~~~~~~-----~----~----~~~~~~~~~~~~~~~~~~---------~~~-------~~~~~~~~~~~~~~l~~~ 136 (182)
+...... + . .....+... .......+ +.. ..+.+....+++..+.+.
T Consensus 77 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (389)
T 2gf3_A 77 KETHHKIFTKTGVLVFGPKGESAFVAETMEAAKE-HSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRA 155 (389)
T ss_dssp HHCSSCCEECCCEEEEEETTCCHHHHHHHHHHHH-TTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHH
T ss_pred HHhCCcceeecceEEEcCCCchHHHHHHHHHHHH-cCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHH
Confidence 1111000 0 0 011111111 11111000 100 011223456788899999
Q ss_pred HHHHHHHcCcEEecCCccceeEEcCCCcEE----EEEeCCEEEecCCC
Q psy2240 137 LGEQAEAMGVEIYPGIPASEVLYHGDGSVK----GIATGDVGIAKDGS 180 (182)
Q Consensus 137 l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~----~v~~~~~vi~adG~ 180 (182)
|.+.+++.|++++++++|++++.++++..+ +....+.||.|+|.
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~a~~vV~A~G~ 203 (389)
T 2gf3_A 156 YRELAEARGAKVLTHTRVEDFDISPDSVKIETANGSYTADKLIVSMGA 203 (389)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTEEEEEEEEEECCGG
T ss_pred HHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCCEEEeCEEEEecCc
Confidence 999999999999999999999875554322 12345677777774
No 32
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.61 E-value=8.9e-15 Score=106.94 Aligned_cols=153 Identities=13% Similarity=0.036 Sum_probs=86.2
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC-Cccc-cccccC----hhH----HhhhhhhHHhcC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG-GHIL-SGAVID----PIA----LNELLPDWKDLG 89 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~-g~~~-~~~~~~----~~~----~~~~~~~~~~~~ 89 (182)
+.++||+|||||++|+++|++|++ |.+|+|||+.+.++ +.+. +++.+. ... .......|....
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~-------G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~ 79 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSA-------HGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPP 79 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTT-------TSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCC
T ss_pred CCcCCEEEECCcHHHHHHHHHHhC-------CCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhh
Confidence 346899999999999999999985 89999999997555 3332 222221 111 111122333221
Q ss_pred CCC-----Cc---------cchhhhH----HHHHhhccCCCCC------------CCC----CCCCCCCccccchHHHHH
Q psy2240 90 APL-----NT---------PVHEDKF----AYLTKSKRIGIPI------------LPG----MPMNNHGNYVVRLGHVVK 135 (182)
Q Consensus 90 ~~~-----~~---------~~~~~~~----~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~~~l~~ 135 (182)
..+ .. ......+ .+... ....... +.. ...+.+....+++..+.+
T Consensus 80 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~ 158 (381)
T 3nyc_A 80 AGFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKA-LVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQ 158 (381)
T ss_dssp TTSCSSCSEEECCEEEECSSCCHHHHHHHHHHHHH-HCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHH
T ss_pred hhhCCcccccccceEEEechHHHHHHHHHHHHHHH-cCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHH
Confidence 111 00 0000111 11111 1111111 100 011223355788899999
Q ss_pred HHHHHHHHcCcEEecCCccceeEEcCCCcEE----EEEeCCEEEecCCC
Q psy2240 136 WLGEQAEAMGVEIYPGIPASEVLYHGDGSVK----GIATGDVGIAKDGS 180 (182)
Q Consensus 136 ~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~----~v~~~~~vi~adG~ 180 (182)
.|.+.+++.|++|+++++|++|+.+++++.+ +....+.||.|.|.
T Consensus 159 ~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g~i~a~~VV~A~G~ 207 (381)
T 3nyc_A 159 GYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAGSYRAAVLVNAAGA 207 (381)
T ss_dssp HHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSEEEEESEEEECCGG
T ss_pred HHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCCEEEcCEEEECCCh
Confidence 9999999999999999999999875544222 12334566666664
No 33
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.61 E-value=6.3e-15 Score=108.71 Aligned_cols=145 Identities=17% Similarity=0.200 Sum_probs=78.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccc-ccccChhHH--hhhhhh---HHh---cCCCCC-
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILS-GAVIDPIAL--NELLPD---WKD---LGAPLN- 93 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~-~~~~~~~~~--~~~~~~---~~~---~~~~~~- 93 (182)
+|+||||||+||++|+.|++ +|++|+||||.+.+...... +-.+.+..+ .+.+.. +.. ......
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~------~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~ 76 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRK------HGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGG 76 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh------CCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCc
Confidence 69999999999999999999 89999999998765422111 111223221 111111 110 000000
Q ss_pred -ccchhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----
Q psy2240 94 -TPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----- 167 (182)
Q Consensus 94 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----- 167 (182)
............... ..... .........+.++|..|.+.|.+.+ +.+|++++++++++.++++.+..
T Consensus 77 ~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG 150 (412)
T 4hb9_A 77 QSRFYNERMRLLAVHG--GISPM-AGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADG 150 (412)
T ss_dssp CCEEECTTSCEEEC-----------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTS
T ss_pred ceeEecCCcceecccC--Ccccc-ccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCC
Confidence 000000000000000 00000 0011112245688888988887655 45789999999998766665432
Q ss_pred -EEeCCEEEecCCC
Q psy2240 168 -IATGDVGIAKDGS 180 (182)
Q Consensus 168 -v~~~~~vi~adG~ 180 (182)
....++||+|||.
T Consensus 151 ~~~~adlvVgADG~ 164 (412)
T 4hb9_A 151 SHENVDVLVGADGS 164 (412)
T ss_dssp CEEEESEEEECCCT
T ss_pred CEEEeeEEEECCCC
Confidence 2346999999997
No 34
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.61 E-value=4.6e-15 Score=107.45 Aligned_cols=124 Identities=24% Similarity=0.397 Sum_probs=80.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+.++|.+.. .|... ....+ .
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~------~g~~v~vie~~~~~gg~~~~--------------~~~~~--~~~~~---~- 55 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRR------SGLSYVILDAEASPGGAWQH--------------AWHSL--HLFSP---A- 55 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------SSCCEEEECCSSSSSGGGGG--------------SCTTC--BCSSC---G-
T ss_pred CcCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCcccC--------------CCCCc--EecCc---h-
Confidence 35799999999999999999999 89999999999887754321 01000 00000 0
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcE-EE----EEeCCEEE
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSV-KG----IATGDVGI 175 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~-~~----v~~~~~vi 175 (182)
....+ +.++.........++..+.++|.+.+++.|++++++++|+++..+++.+. +. ....+.||
T Consensus 56 -------~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~d~vV 125 (357)
T 4a9w_A 56 -------GWSSI---PGWPMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGRQWLARAVI 125 (357)
T ss_dssp -------GGSCC---SSSCCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSCEEEEEEEE
T ss_pred -------hhhhC---CCCCCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCCEEEeCEEE
Confidence 00001 11111122234456778999999999999999999999999987544322 21 23346677
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|+|.
T Consensus 126 ~AtG~ 130 (357)
T 4a9w_A 126 SATGT 130 (357)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 77773
No 35
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.61 E-value=1.1e-14 Score=106.34 Aligned_cols=153 Identities=17% Similarity=0.218 Sum_probs=85.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccc--cc-ccC---------hhHHhhhhhhHHhcC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILS--GA-VID---------PIALNELLPDWKDLG 89 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~--~~-~~~---------~~~~~~~~~~~~~~~ 89 (182)
++||+|||||++|+++|++|++ +|.+|+|||+.....+...+ +. .+. ..........|....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~------~G~~V~vle~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~ 75 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATR------AGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVPLVLRAQMLWDELS 75 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHH------TTCCEEEECSSCSSSSSSSCCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCCCCCCCCCCccceeeeccCCCchHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999 89999999998765432211 11 111 011112222333221
Q ss_pred ---C--CCC--c-cc-----hhhhHHHH---HhhccCCCCCC---------CCC-------CCCCCCccccchHHHHHHH
Q psy2240 90 ---A--PLN--T-PV-----HEDKFAYL---TKSKRIGIPIL---------PGM-------PMNNHGNYVVRLGHVVKWL 137 (182)
Q Consensus 90 ---~--~~~--~-~~-----~~~~~~~~---~~~~~~~~~~~---------~~~-------~~~~~~~~~~~~~~l~~~l 137 (182)
. ... . .+ ....+... ..........+ +.. ..+.+....+++..+.+.|
T Consensus 76 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~l~~~l 155 (372)
T 2uzz_A 76 RHNEDDPIFVRSGVINLGPADSTFLANVAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTW 155 (372)
T ss_dssp TTCSSSCSEECCCEEEEEETTCHHHHHHHHHHHHTTCCEEEEEHHHHHHHCTTCCCCTTEEEEEESSCEEEEHHHHHHHH
T ss_pred HhCCCccceeeeceEEEeCCCcHHHHHHHHHHHHcCCCcEecCHHHHHhhCCCccCCCCceEEEeCCCcEEcHHHHHHHH
Confidence 1 000 0 00 00011110 00000110000 000 0122335677888999999
Q ss_pred HHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCCEEEecCCC
Q psy2240 138 GEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGDVGIAKDGS 180 (182)
Q Consensus 138 ~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~~vi~adG~ 180 (182)
.+.+++.|++++++++|++++.++++..+. ....+.||.|.|.
T Consensus 156 ~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~~~a~~vV~a~G~ 202 (372)
T 2uzz_A 156 IQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGEYQAKKAIVCAGT 202 (372)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCEEEEEEEEECCGG
T ss_pred HHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCeEEcCEEEEcCCc
Confidence 999999999999999999998755443221 1234667767664
No 36
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.61 E-value=1.9e-16 Score=116.47 Aligned_cols=144 Identities=16% Similarity=0.102 Sum_probs=84.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCc-cccccccChhHH--hhhhhhHHhc---CCCCCcc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGH-ILSGAVIDPIAL--NELLPDWKDL---GAPLNTP 95 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~-~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~ 95 (182)
++||+|||||++|+++|+.|++ .|++|+||||.+...+. ...++.+.+... .+.++.+... .......
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~------~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~ 75 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK------AGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGV 75 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH------HTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCE
T ss_pred CccEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceE
Confidence 4799999999999999999999 79999999998742100 111222333221 2222222111 1000000
Q ss_pred -chhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCC-CcEEE------
Q psy2240 96 -VHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD-GSVKG------ 167 (182)
Q Consensus 96 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~-g~~~~------ 167 (182)
+.... ....+.+.... .....+.+++..+.+.|.+.+.+.|++|+++++|++++.+++ +..+.
T Consensus 76 ~~~~~~-----~~~~~~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~ 146 (394)
T 1k0i_A 76 EIAFAG-----QRRRIDLKRLS----GGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGE 146 (394)
T ss_dssp EEEETT-----EEEEECHHHHH----TSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTE
T ss_pred EEEECC-----ceEEecccccc----CCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCc
Confidence 00000 00000000000 011245667888999999999888999999999999986432 23222
Q ss_pred --EEeCCEEEecCCC
Q psy2240 168 --IATGDVGIAKDGS 180 (182)
Q Consensus 168 --v~~~~~vi~adG~ 180 (182)
....++||+|||.
T Consensus 147 ~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 147 RLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEEECSEEEECCCT
T ss_pred EEEEEeCEEEECCCC
Confidence 2457999999997
No 37
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.60 E-value=1.6e-15 Score=111.84 Aligned_cols=144 Identities=17% Similarity=0.153 Sum_probs=83.8
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccc-cCh---hHHhhhhhhHHhc---CCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAV-IDP---IALNELLPDWKDL---GAPL 92 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~-~~~---~~~~~~~~~~~~~---~~~~ 92 (182)
+..+||+|||||++|+++|+.|++ .|++|+||||.+........+.. +.+ ..+.+.++.|... ....
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~ 97 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ------NGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPM 97 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT------TTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhccc
Confidence 456899999999999999999999 89999999998765432211111 111 1222223332221 1111
Q ss_pred CccchhhhHHHHHhhccCCCCCC-CCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----
Q psy2240 93 NTPVHEDKFAYLTKSKRIGIPIL-PGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG---- 167 (182)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~---- 167 (182)
...+ +........... +. ........+++..|.+.|.+.+.+ ++|+++++|++++.+++++.+.
T Consensus 98 ~~~~-------~~~~g~~~~~~~~~~--~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g 166 (398)
T 2xdo_A 98 GVNI-------ADEKGNILSTKNVKP--ENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENK 166 (398)
T ss_dssp CEEE-------ECSSSEEEEECCCGG--GTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTS
T ss_pred ceEE-------ECCCCCchhhccccc--cCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCC
Confidence 1000 000000000000 00 001123468889999999887753 6899999999998765543332
Q ss_pred -EEeCCEEEecCCC
Q psy2240 168 -IATGDVGIAKDGS 180 (182)
Q Consensus 168 -v~~~~~vi~adG~ 180 (182)
....++||+|||.
T Consensus 167 ~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 167 PSETADLVILANGG 180 (398)
T ss_dssp CCEEESEEEECSCT
T ss_pred cEEecCEEEECCCc
Confidence 2345899999997
No 38
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.60 E-value=2.9e-15 Score=110.42 Aligned_cols=140 Identities=15% Similarity=0.115 Sum_probs=81.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHH--hhhhhhHHhcCCCCCccchh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL--NELLPDWKDLGAPLNTPVHE 98 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 98 (182)
..+||+|||||++|+++|+.|++ .|++|+||||.+........+-.+.+... .+.++.+.. ........
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~------~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~---~~~~~~~~ 74 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD------AGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELD---SISVPSSS 74 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGG---GTCBCCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccc---cccccccc
Confidence 35799999999999999999999 89999999998764211111212333222 122221110 00000000
Q ss_pred hhHHHHHh-hccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCC
Q psy2240 99 DKFAYLTK-SKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGD 172 (182)
Q Consensus 99 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~ 172 (182)
+.++.. .... ... .......+++..+.+.|.+.+ .+++|+++++|++++.++++..+. ....+
T Consensus 75 --~~~~~~~~g~~-~~~------~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad 143 (397)
T 2vou_A 75 --MEYVDALTGER-VGS------VPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEAN 143 (397)
T ss_dssp --EEEEETTTCCE-EEE------EECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEES
T ss_pred --eEEEecCCCCc-ccc------ccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECC
Confidence 000000 0000 000 000122456678888888776 589999999999998766554332 24569
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
+||+|||.
T Consensus 144 ~vV~AdG~ 151 (397)
T 2vou_A 144 WVIGADGG 151 (397)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999997
No 39
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.60 E-value=2.7e-15 Score=110.97 Aligned_cols=146 Identities=24% Similarity=0.294 Sum_probs=85.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCce-EEEEecCCCCCCccccccccChhHH--hhhhhhHHhc---CCCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELK-VCLVEKAAEVGGHILSGAVIDPIAL--NELLPDWKDL---GAPLN 93 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~-v~vlE~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~ 93 (182)
+..+||+|||||++|+++|+.|++ .|++ |+||||.+..+.. ..+..+.+..+ .+.++.+... .....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~------~G~~~v~v~E~~~~~~~~-g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~ 74 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQ------AGIGKVTLLESSSEIRPL-GVGINIQPAAVEALAELGLGPALAATAIPTH 74 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH------TTCSEEEEEESSSSCCCC-SCEEEECHHHHHHHHHTTCHHHHHHHSEEEC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCCCcccc-eeEEEEChHHHHHHHHCCChHHHHhhCCCcc
Confidence 345899999999999999999999 8999 9999998765431 12222333222 1222222211 10000
Q ss_pred ccchhhhHHHHHhhcc--CCCCCCCCCCCCCCCccccchHHHHHHHHHHHHH-cC-cEEecCCccceeEEcCCCcEEE--
Q psy2240 94 TPVHEDKFAYLTKSKR--IGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEA-MG-VEIYPGIPASEVLYHGDGSVKG-- 167 (182)
Q Consensus 94 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~g-v~i~~~~~v~~i~~~~~g~~~~-- 167 (182)
.. .+...... ...+. .....+....+.+++..|.+.|.+.+++ .| ++|+++++|++++. +++..+.
T Consensus 75 ~~------~~~~~~g~~~~~~~~-~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~ 146 (410)
T 3c96_A 75 EL------RYIDQSGATVWSEPR-GVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGA 146 (410)
T ss_dssp EE------EEECTTSCEEEEEEC-GGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEE
T ss_pred eE------EEEcCCCCEEeeccC-CccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEe
Confidence 00 00000000 00000 0000011224678999999999999976 46 58999999999987 5554332
Q ss_pred --------EEeCCEEEecCCC
Q psy2240 168 --------IATGDVGIAKDGS 180 (182)
Q Consensus 168 --------v~~~~~vi~adG~ 180 (182)
....++||+|||.
T Consensus 147 ~~~~g~~~~~~ad~vV~AdG~ 167 (410)
T 3c96_A 147 RDGHGKPQALGADVLVGADGI 167 (410)
T ss_dssp EETTSCEEEEEESEEEECCCT
T ss_pred cCCCCCceEEecCEEEECCCc
Confidence 2345899999997
No 40
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.59 E-value=1.7e-14 Score=103.32 Aligned_cols=111 Identities=17% Similarity=0.236 Sum_probs=70.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCC--CceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGK--ELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHE 98 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~--g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (182)
.++||+|||||++|+++|+.|++ . |++|+|||+.+.+++..+.++..... .....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~------~~~G~~V~LiEk~~~~GGg~~~~g~~~~~-----------------~~~~~ 134 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLST------LRPDLRITIVEAGVAPGGGAWLGGQLFSA-----------------MVMRK 134 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHH------HCTTSCEEEEESSSSCCTTTTCCBTTCCC-----------------EEEET
T ss_pred CcCCEEEECccHHHHHHHHHHHh------cCCCCEEEEEeCCCccCCccccCCccchh-----------------hhcch
Confidence 35899999999999999999999 5 89999999998776543322111000 00011
Q ss_pred hhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHH-cCcEEecCCccceeEEcC
Q psy2240 99 DKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHG 161 (182)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~~~~ 161 (182)
....++.... ..+.....+ ....+...+.+.|.+.+.+ .|++++++++|+++..++
T Consensus 135 ~~~~~L~~~G-v~~~~~G~~------~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 135 PADVFLDEVG-VPYEDEGDY------VVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRK 191 (344)
T ss_dssp TTHHHHHHHT-CCCEECSSE------EEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEE
T ss_pred HHHHHHHHcC-CcccccCCe------EEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecC
Confidence 2223332211 111110000 1122356788899998887 599999999999997754
No 41
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.59 E-value=3.9e-14 Score=107.12 Aligned_cols=123 Identities=24% Similarity=0.252 Sum_probs=80.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHh--hhhhhHHhcCCCCCccchh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALN--ELLPDWKDLGAPLNTPVHE 98 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 98 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..++... ..+.+..+. ..++.+...
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~------~G~~V~liEk~~~~g~~~~--~~~~~~~~~~l~~~g~~~~~---------- 152 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELAL------LGARVVLVEKRIKFSRHNV--LHLWPFTIHDLRALGAKKFY---------- 152 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCSSCCCCCE--EECCHHHHHHHHTTTHHHHC----------
T ss_pred CCCCEEEECccHHHHHHHHHHHH------CCCeEEEEEeccccCCCCc--ccCChhHHHHHHHcCCcccc----------
Confidence 45799999999999999999999 8999999999987653211 111121111 111111100
Q ss_pred hhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcC---CCcEEEE-------
Q psy2240 99 DKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG---DGSVKGI------- 168 (182)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~---~g~~~~v------- 168 (182)
..+. ......+++..+.+.|.+.+++.|++|+++++|+++..++ ++..+.+
T Consensus 153 ---------~~~~----------~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~ 213 (497)
T 2bry_A 153 ---------GRFC----------TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQ 213 (497)
T ss_dssp ---------TTTT----------CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHH
T ss_pred ---------cccc----------ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCC
Confidence 0000 0012356778999999999998999999999999998642 2223322
Q ss_pred ---EeCCEEEecCCC
Q psy2240 169 ---ATGDVGIAKDGS 180 (182)
Q Consensus 169 ---~~~~~vi~adG~ 180 (182)
...++||.|+|.
T Consensus 214 ~~~i~ad~VV~A~G~ 228 (497)
T 2bry_A 214 LASYEFDVLISAAGG 228 (497)
T ss_dssp HHTCCBSEEEECCCT
T ss_pred EEEEEcCEEEECCCC
Confidence 124789999886
No 42
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.58 E-value=1.7e-14 Score=112.16 Aligned_cols=154 Identities=16% Similarity=0.137 Sum_probs=88.3
Q ss_pred cccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHH--hhhhhhHHh---cCCCC
Q psy2240 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIAL--NELLPDWKD---LGAPL 92 (182)
Q Consensus 18 ~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~---~~~~~ 92 (182)
.+..++||+|||||++|+++|+.|++. +|++|+||||.+..... ..+..+.+..+ .+.++.+.. .....
T Consensus 28 ~~~~~~dVlIVGaGpaGL~~A~~La~~-----~G~~V~viEr~~~~~~~-g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~ 101 (639)
T 2dkh_A 28 AVPSQVDVLIVGCGPAGLTLAAQLAAF-----PDIRTCIVEQKEGPMEL-GQADGIACRTMEMFEAFEFADSILKEACWI 101 (639)
T ss_dssp SCCSEEEEEEECCSHHHHHHHHHHTTC-----TTSCEEEECSSSSCCSS-CSCCEECHHHHHHHHHTTCHHHHHHHSEEE
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHHh-----CCCCEEEEeCCCCCCCC-CceeeeCHHHHHHHHHcCcHHHHHHhcccc
Confidence 334568999999999999999999871 38999999998765432 22223333322 222222211 11000
Q ss_pred Ccc-chhhh---HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCc--EEecCCccceeEEcCC----
Q psy2240 93 NTP-VHEDK---FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGD---- 162 (182)
Q Consensus 93 ~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~i~~~~~v~~i~~~~~---- 162 (182)
... +.... ...+..... ++.. ...........+++..+.+.|.+.+++.|+ +|+++++|++++.+++
T Consensus 102 ~~~~~~~~~~~~~g~~~~~~~--~~~~-~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~ 178 (639)
T 2dkh_A 102 NDVTFWKPDPGQPGRIARHGR--VQDT-EDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADY 178 (639)
T ss_dssp CEEEEEEECTTSTTCEEEEEE--EESS-CTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSC
T ss_pred cceEEECCCCCCCcceEeecc--cCcc-cCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcC
Confidence 000 00000 000000000 0000 001111224578999999999999999877 9999999999987653
Q ss_pred CcEEEE-------------EeCCEEEecCCC
Q psy2240 163 GSVKGI-------------ATGDVGIAKDGS 180 (182)
Q Consensus 163 g~~~~v-------------~~~~~vi~adG~ 180 (182)
+..+.+ ...++||+|||+
T Consensus 179 ~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~ 209 (639)
T 2dkh_A 179 PVTVTLERCDAAHAGQIETVQARYVVGCDGA 209 (639)
T ss_dssp CEEEEEEECSGGGTTCEEEEEEEEEEECCCT
T ss_pred CEEEEEEeccccCCCCeEEEEeCEEEECCCc
Confidence 222222 235899999997
No 43
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.58 E-value=6.5e-14 Score=107.83 Aligned_cols=142 Identities=18% Similarity=0.166 Sum_probs=80.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-c-cccc---C---hhHHhhhhhhHHhcCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-S-GAVI---D---PIALNELLPDWKDLGAP 91 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~-~~~~---~---~~~~~~~~~~~~~~~~~ 91 (182)
+.++||+|||||++|+++|+.|++ .|.+|+||||.+..++.+. + ++.. . .......+.+....+..
T Consensus 5 ~~~~DVvVVGaG~AGl~AA~~la~------~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~ 78 (588)
T 2wdq_A 5 VREFDAVVIGAGGAGMRAALQISQ------SGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDY 78 (588)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTT
T ss_pred cccCCEEEECcCHHHHHHHHHHHH------CCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCC
Confidence 456899999999999999999999 8999999999987654432 2 2211 1 11111111111111111
Q ss_pred CCccc--------hhhhHHHHHhhccCCCCCCCCCCCC--CCCcc----------------ccchHHHHHHHHHHHHHcC
Q psy2240 92 LNTPV--------HEDKFAYLTKSKRIGIPILPGMPMN--NHGNY----------------VVRLGHVVKWLGEQAEAMG 145 (182)
Q Consensus 92 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------------~~~~~~l~~~l~~~~~~~g 145 (182)
+.+.. ....+.|+... ...+......... ..++. ......+.+.|.+.+++.|
T Consensus 79 ~~d~~~v~~~~~~~~~~i~~l~~~-Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~g 157 (588)
T 2wdq_A 79 IGDQDAIEYMCKTGPEAILELEHM-GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNH 157 (588)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHT-TCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHhHHHHHHHHHHc-CCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 11110 11233444322 2222211110000 00000 0123678899999998899
Q ss_pred cEEecCCccceeEEcCCCcEEEE
Q psy2240 146 VEIYPGIPASEVLYHGDGSVKGI 168 (182)
Q Consensus 146 v~i~~~~~v~~i~~~~~g~~~~v 168 (182)
++|+++++|+++..++++.+.++
T Consensus 158 v~i~~~~~v~~L~~~~~g~v~Gv 180 (588)
T 2wdq_A 158 TTIFSEWYALDLVKNQDGAVVGC 180 (588)
T ss_dssp CEEEETEEEEEEEECTTSCEEEE
T ss_pred CEEEeCcEEEEEEECCCCEEEEE
Confidence 99999999999987545655554
No 44
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.57 E-value=3.4e-14 Score=107.92 Aligned_cols=55 Identities=25% Similarity=0.318 Sum_probs=46.5
Q ss_pred ccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE-------EeCCEEEecCCC
Q psy2240 125 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI-------ATGDVGIAKDGS 180 (182)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v-------~~~~~vi~adG~ 180 (182)
.+.+++..+.+.|.+.+++.|++++++ +|+++..++++.++++ ...++||+|+|.
T Consensus 167 ~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~ 228 (511)
T 2weu_A 167 AYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGF 228 (511)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGG
T ss_pred eEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCc
Confidence 578999999999999999999999999 9999987666654443 456899999996
No 45
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.57 E-value=3.7e-14 Score=100.06 Aligned_cols=109 Identities=21% Similarity=0.394 Sum_probs=69.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCC-CceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGK-ELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~-g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
.++||+|||||++|+++|+.|++ + |.+|+|||+.+.+++..+..+..... + .....
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~------~~G~~V~viEk~~~~gg~~~~~~~~~~~-----~------------~~~~~ 94 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISK------NPNVQVAIIEQSVSPGGGAWLGGQLFSA-----M------------IVRKP 94 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHT------STTSCEEEEESSSSCCTTTTCCSTTCCC-----E------------EEETT
T ss_pred cccCEEEECccHHHHHHHHHHHH------cCCCeEEEEECCCCCCCceecCCcchHH-----H------------HcCcH
Confidence 45799999999999999999999 7 99999999998776543322111000 0 00011
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccc--cchHHHHHHHHHHHHH-cCcEEecCCccceeEEcC
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYV--VRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHG 161 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~~~~ 161 (182)
...++... ...+.. .+.+. .++..+...|.+.+.+ .|++++++++|+++..++
T Consensus 95 ~~~~l~~~-G~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~ 150 (284)
T 1rp0_A 95 AHLFLDEI-GVAYDE--------QDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG 150 (284)
T ss_dssp THHHHHHH-TCCCEE--------CSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEET
T ss_pred HHHHHHHc-CCCccc--------CCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC
Confidence 12233221 111111 11222 2567788888888866 699999999999998643
No 46
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.56 E-value=4.2e-14 Score=100.73 Aligned_cols=117 Identities=21% Similarity=0.365 Sum_probs=73.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCC--CceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGK--ELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~--g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
++||+|||||++|+++|+.|++ . |.+|+|+|+.+..++..+.++..... ......
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~------~~~g~~V~v~e~~~~~ggg~~~~g~~~~~-----------------~~~~~~ 121 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAK------NRPDLKVCIIESSVAPGGGSWLGGQLFSA-----------------MVMRKP 121 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHH------HCTTSCEEEECSSSSCCTTTTCCGGGCCC-----------------EEEETT
T ss_pred cCCEEEECccHHHHHHHHHHHh------cCCCCeEEEEecCccccccccccCcccch-----------------hhhhhH
Confidence 4699999999999999999999 5 89999999998887644322211100 001112
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHH-cCcEEecCCccceeEEcC--C-C--cEEEE
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHG--D-G--SVKGI 168 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~~~~--~-g--~~~~v 168 (182)
...++.... ..+.. . .......+...+...|.+.+.+ .|++++++++|+++..++ + + ++.|+
T Consensus 122 ~~~~L~~~G-v~~~~--~----g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GV 189 (326)
T 2gjc_A 122 AHLFLQELE-IPYED--E----GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGV 189 (326)
T ss_dssp THHHHHHTT-CCCEE--C----SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEE
T ss_pred HHHHHHhhC-ccccc--C----CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEE
Confidence 222332211 11111 0 0001122456788889998887 499999999999998753 3 4 56554
No 47
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.56 E-value=5.3e-15 Score=109.28 Aligned_cols=152 Identities=16% Similarity=0.110 Sum_probs=83.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCC--CceEEEEecCCCCCCccc-ccc-cc-Ch--------hHHhhhhhhHHhc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGK--ELKVCLVEKAAEVGGHIL-SGA-VI-DP--------IALNELLPDWKDL 88 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~--g~~v~vlE~~~~~~g~~~-~~~-~~-~~--------~~~~~~~~~~~~~ 88 (182)
++||+|||||++|+++|+.|++ + |++|+|||+.....+.+. +++ .+ .. ......+..|...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~------~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~ 109 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQ------LAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGA 109 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------HCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTG
T ss_pred cCCEEEECCcHHHHHHHHHHHh------cCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHH
Confidence 5899999999999999999999 7 999999999865554432 222 12 11 1111122233321
Q ss_pred -CC----CCCc--------------cchhhhHHHHHhhcc--CCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcE
Q psy2240 89 -GA----PLNT--------------PVHEDKFAYLTKSKR--IGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVE 147 (182)
Q Consensus 89 -~~----~~~~--------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~ 147 (182)
+. .+.. .+............. ...+... ...+.+....+++..+.+.|.+.+++.|++
T Consensus 110 ~~~~~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~ 188 (405)
T 3c4n_A 110 LGSGKTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLP-VARVDPRALTYRPGSLALLAAQQAIGQGAG 188 (405)
T ss_dssp GGSSCCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSC-EEEEETTCEEECHHHHHHHHHHHHHTTTCE
T ss_pred hCCCCCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcce-EEEEcCCCEEEcHHHHHHHHHHHHHHCCCE
Confidence 00 0000 000000000000000 0000000 001223355778899999999999999999
Q ss_pred EecCCccc---------eeEEcCCCcEE----EEEeCCEEEecCCC
Q psy2240 148 IYPGIPAS---------EVLYHGDGSVK----GIATGDVGIAKDGS 180 (182)
Q Consensus 148 i~~~~~v~---------~i~~~~~g~~~----~v~~~~~vi~adG~ 180 (182)
++++++|+ ++..++++..+ +....+.||.|+|.
T Consensus 189 i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g~i~a~~VV~A~G~ 234 (405)
T 3c4n_A 189 LLLNTRAELVPGGVRLHRLTVTNTHQIVVHETRQIRAGVIIVAAGA 234 (405)
T ss_dssp EECSCEEEEETTEEEEECBCC-------CBCCEEEEEEEEEECCGG
T ss_pred EEcCCEEEeccccccccceEeeCCeEEEEECCcEEECCEEEECCCc
Confidence 99999999 88754332211 23445778888875
No 48
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.56 E-value=5.1e-14 Score=107.58 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=46.4
Q ss_pred CccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE-------EeCCEEEecCCC
Q psy2240 124 GNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI-------ATGDVGIAKDGS 180 (182)
Q Consensus 124 ~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v-------~~~~~vi~adG~ 180 (182)
..+.+++..+.+.|.+.+++.|++++++ +|+++..++++.++++ ...++||+|+|.
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~ 220 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGM 220 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGG
T ss_pred ccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCC
Confidence 3678999999999999999999999999 8999987666654443 346899999996
No 49
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.56 E-value=5.9e-14 Score=112.11 Aligned_cols=153 Identities=18% Similarity=0.225 Sum_probs=86.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCCC--CCccc-cccccCh----h----HHhhhhhhHHhc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAEV--GGHIL-SGAVIDP----I----ALNELLPDWKDL 88 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~~--~g~~~-~~~~~~~----~----~~~~~~~~~~~~ 88 (182)
.++||+|||||++|+++|++|++ +|. +|+|||+.... ++.+. +.+.+.. . ........|...
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~------~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l 76 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVT------RGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSL 76 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999 898 99999998753 33322 2222211 0 111112223332
Q ss_pred CCCC------Ccc----chhhhHHHHH------hhccCCCCCC---------CCC-------CCCCCCccccchHHHHHH
Q psy2240 89 GAPL------NTP----VHEDKFAYLT------KSKRIGIPIL---------PGM-------PMNNHGNYVVRLGHVVKW 136 (182)
Q Consensus 89 ~~~~------~~~----~~~~~~~~~~------~~~~~~~~~~---------~~~-------~~~~~~~~~~~~~~l~~~ 136 (182)
.... ... .....+..+. .........+ +.. ..+.+....+++..+...
T Consensus 77 ~~~~~~~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~ 156 (830)
T 1pj5_A 77 TEDGVSCFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQL 156 (830)
T ss_dssp EETTEESEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHH
T ss_pred HhhCCCCeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHH
Confidence 1000 000 0011111110 0001111100 000 011223556788999999
Q ss_pred HHHHHHHcCcEEecCCccceeEEcCCCcEEEE------EeCCEEEecCCC
Q psy2240 137 LGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI------ATGDVGIAKDGS 180 (182)
Q Consensus 137 l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v------~~~~~vi~adG~ 180 (182)
|.+.+++.|++|+++++|++|+.++ +.+.+| +.++.||.|.|.
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~G~i~Ad~VV~AaG~ 205 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTADGVIPADIVVSCAGF 205 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTEEEECSEEEECCGG
T ss_pred HHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECCcEEECCEEEECCcc
Confidence 9999999999999999999998744 444333 345777777775
No 50
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.55 E-value=2.2e-14 Score=109.88 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=37.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
.++||+|||||++|+++|+.|++ +|++|+|||+.+..+|.+.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~------~G~~V~LlEk~d~~~GtS~ 58 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQV------RGIQTGLVEMNDFASGTSS 58 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESSSTTCSGGG
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCcEEEEECCCCCCCccc
Confidence 46899999999999999999999 8999999999976666543
No 51
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.55 E-value=1.7e-13 Score=104.44 Aligned_cols=55 Identities=18% Similarity=0.362 Sum_probs=45.6
Q ss_pred ccccchHHHHHHHHHHHHH-cCcEEecCCccceeEEcCCCcEEEE-------EeCCEEEecCCC
Q psy2240 125 NYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGI-------ATGDVGIAKDGS 180 (182)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~~~~~g~~~~v-------~~~~~vi~adG~ 180 (182)
.+.+++..+.+.|.+.+++ .|++++++ +|+++..++++.++++ ...++||+|||.
T Consensus 169 ~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~ 231 (526)
T 2pyx_A 169 GYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGA 231 (526)
T ss_dssp EEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGG
T ss_pred eEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCc
Confidence 5789999999999999998 89999999 6999987656654433 346899999996
No 52
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.54 E-value=1.7e-13 Score=105.94 Aligned_cols=143 Identities=16% Similarity=0.115 Sum_probs=81.0
Q ss_pred cccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-ccccc-C------hhHHhhhhhhHHhcC
Q psy2240 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVI-D------PIALNELLPDWKDLG 89 (182)
Q Consensus 18 ~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~-~------~~~~~~~~~~~~~~~ 89 (182)
.++.++||||||||++|+++|+.|++ .|.+|+||||.+..++.+. +.+.+ . .......+.+....+
T Consensus 14 ~~~~~~DVvVVG~G~AGl~AAl~aa~------~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g 87 (621)
T 2h88_A 14 VVDHEFDAVVVGAGGAGLRAAFGLSE------AGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGS 87 (621)
T ss_dssp EEEEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHT
T ss_pred cccccCCEEEECccHHHHHHHHHHHH------CCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhc
Confidence 34567899999999999999999999 8999999999976655432 22211 1 111111211111112
Q ss_pred CCCCccc--------hhhhHHHHHhhccCCCCCCCCCCCC--CCCc--------------c---ccchHHHHHHHHHHHH
Q psy2240 90 APLNTPV--------HEDKFAYLTKSKRIGIPILPGMPMN--NHGN--------------Y---VVRLGHVVKWLGEQAE 142 (182)
Q Consensus 90 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--------------~---~~~~~~l~~~l~~~~~ 142 (182)
..+.+.. ....+.|+... ...+......... ..++ . ......+...|.+.++
T Consensus 88 ~~l~d~~~v~~l~~~s~~~i~~L~~~-Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~ 166 (621)
T 2h88_A 88 DWLGDQDAIHYMTEQAPAAVIELENY-GMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSL 166 (621)
T ss_dssp TTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHH
Confidence 1221111 11233444332 2222211110000 0000 0 0134578999999998
Q ss_pred HcCcEEecCCccceeEEcCCCcEEEE
Q psy2240 143 AMGVEIYPGIPASEVLYHGDGSVKGI 168 (182)
Q Consensus 143 ~~gv~i~~~~~v~~i~~~~~g~~~~v 168 (182)
+.|++|++++.|+++..+ ++.+.++
T Consensus 167 ~~gv~i~~~~~v~~Li~~-~g~v~Gv 191 (621)
T 2h88_A 167 RYDTSYFVEYFALDLLME-NGECRGV 191 (621)
T ss_dssp TSCCEEEETEEEEEEEEE-TTEEEEE
T ss_pred hCCCEEEEceEEEEEEEE-CCEEEEE
Confidence 899999999999999863 4555543
No 53
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.54 E-value=1.9e-13 Score=103.61 Aligned_cols=41 Identities=22% Similarity=0.393 Sum_probs=35.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
.++||+|||||++|+++|+.|++ +|++|+|||+.....|.+
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~------~G~~V~llE~~~~~~gtS 42 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAG------RGLSVLMLEAQDLACATS 42 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSTTCSGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHh------CCCCEEEEECCCCCCCcc
Confidence 35899999999999999999999 899999999987655544
No 54
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.54 E-value=7.6e-15 Score=114.44 Aligned_cols=135 Identities=16% Similarity=0.191 Sum_probs=77.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhH--HhhhhhhHHhcC---CCCCcc-
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIA--LNELLPDWKDLG---APLNTP- 95 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~- 95 (182)
++||+||||||+||++|+.|++... +..|++|+||||.+..... ..+..+.+.. +.+.++.|.... ......
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~-~~~Gi~v~viE~~~~~~~~-gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~ 85 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVR-QKPDLKVRIIDKRSTKVYN-GQADGLQCRTLESLKNLGLADKILSEANDMSTIA 85 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHH-HSTTCCEEEECSSSSCCCS-CSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhcccc-ccCCCCEEEEeCCCCCCCC-CceeEEChHHHHHHHHCCCHHHHHHhccccceEE
Confidence 5799999999999999999998211 1138999999998754321 1222333333 333344443321 111110
Q ss_pred chhhh-HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcC---cEEecCCccceeEEcC
Q psy2240 96 VHEDK-FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMG---VEIYPGIPASEVLYHG 161 (182)
Q Consensus 96 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g---v~i~~~~~v~~i~~~~ 161 (182)
+.... ...+.....+.... ..........+++..+.+.|.+.+++.| ++|++++++++++.++
T Consensus 86 ~~~~~~~g~i~~~~~~~~~~---~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 86 LYNPDENGHIRRTDRIPDTL---PGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDS 152 (665)
T ss_dssp EEEECTTSCEEEEEEEESSC---TTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECG
T ss_pred EEeCCCCcceEeecccCccc---CCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecC
Confidence 00000 00000000000000 0111222567899999999999998876 8999999999998754
No 55
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.54 E-value=3.2e-13 Score=105.00 Aligned_cols=42 Identities=29% Similarity=0.442 Sum_probs=36.7
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
+.++||||||||++|+++|+.|++ .|.+|+||||.+..++.+
T Consensus 3 ~~~~DVvVIGgG~AGL~AAl~aae------~G~~V~vlEK~~~~~g~s 44 (660)
T 2bs2_A 3 VQYCDSLVIGGGLAGLRAAVATQQ------KGLSTIVLSLIPVKRSHS 44 (660)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHT------TTCCEEEECSSCGGGSGG
T ss_pred cccccEEEECchHHHHHHHHHHHH------CCCcEEEEeccCCCCCcc
Confidence 346899999999999999999999 899999999998665443
No 56
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.54 E-value=1.8e-13 Score=106.34 Aligned_cols=142 Identities=18% Similarity=0.146 Sum_probs=79.5
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCC------CceEEEEecCCCCCCcccccc--cc----ChhHHhhhhhhHHh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGK------ELKVCLVEKAAEVGGHILSGA--VI----DPIALNELLPDWKD 87 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~------g~~v~vlE~~~~~~g~~~~~~--~~----~~~~~~~~~~~~~~ 87 (182)
..++||||||||++||++|+.|++ . |.+|+||||.+..++.+.+.+ .+ ........+.....
T Consensus 20 ~~~~DVvVVG~G~AGL~AAl~aa~------~~~~~~pG~~V~vleK~~~~~s~s~AqG~~gi~a~l~~ds~e~~~~~~~~ 93 (662)
T 3gyx_A 20 EHSVDLLMVGGGMGNCGAAFEAVR------WADKYAPEAKILLVDKASLERSGAVAQGLSAINTYLGDNNADDYVRMVRT 93 (662)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHH------HHHHHCTTCCEEEECSSCTTTCSTTTTCEEEECCCCTTSCHHHHHHHHHH
T ss_pred eEEcCEEEECCCHHHHHHHHHHHh------hccccCCCCcEEEEEecCCCCCcccccCcchheeecCCCCHHHHHHHHHH
Confidence 346899999999999999999998 5 899999999876554433333 21 11111111111111
Q ss_pred cCCCCCccc--------hhhhHHHHHhhccCCCCCC-CCC-------------------CCCCCC--ccccchHHHHHHH
Q psy2240 88 LGAPLNTPV--------HEDKFAYLTKSKRIGIPIL-PGM-------------------PMNNHG--NYVVRLGHVVKWL 137 (182)
Q Consensus 88 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~-------------------~~~~~~--~~~~~~~~l~~~l 137 (182)
....+.+.. ....+.++...+ ..+... .+. ...... ...+....+.+.|
T Consensus 94 ~~~gl~d~~~v~~l~~~a~~~i~~L~~~G-v~f~~~~~~G~~~~g~~~~~fg~~~~~gg~~~~r~~~~~~~~G~~i~~~L 172 (662)
T 3gyx_A 94 DLMGLVREDLIYDLGRHVDDSVHLFEEWG-LPVWIKDEHGHNLDGAQAKAAGKSLRNGDKPVRSGRWQIMINGESYKVIV 172 (662)
T ss_dssp HTTTCCCHHHHHHHHHHHHHHHHHHHHHT-CCBCEECSSSCEECHHHHHHHTCCTTTTCCBCCSSTTCEEEEETSHHHHH
T ss_pred hcCCCccHHHHHHHHHHHHHHHHHHHHcC-CCceecCCCCccccchhhhccccccccCccccccceecccCCHHHHHHHH
Confidence 111121111 112233333211 112111 000 000000 1234456788899
Q ss_pred HHHHHHc--CcEEecCCccceeEEcCC--CcEEEE
Q psy2240 138 GEQAEAM--GVEIYPGIPASEVLYHGD--GSVKGI 168 (182)
Q Consensus 138 ~~~~~~~--gv~i~~~~~v~~i~~~~~--g~~~~v 168 (182)
.+.+++. |++|++++.|+++..+++ +++.|+
T Consensus 173 ~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv 207 (662)
T 3gyx_A 173 AEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGA 207 (662)
T ss_dssp HHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEE
T ss_pred HHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEE
Confidence 9999887 999999999999987554 366654
No 57
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.53 E-value=4.6e-13 Score=104.17 Aligned_cols=143 Identities=24% Similarity=0.221 Sum_probs=78.7
Q ss_pred ccccccEEEECCChHHHHHHHHHH----HhhhhcCCCceEEEEecCCCCCCccccccc------cC-------hhHHhhh
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLK----QLAEKDGKELKVCLVEKAAEVGGHILSGAV------ID-------PIALNEL 81 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~----~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~------~~-------~~~~~~~ 81 (182)
...++||||||||++|+++|+.|+ + .|.+|+||||.+..++...+++. +. .......
T Consensus 19 ~~~~~DVvVIG~G~AGl~AAl~aa~~~~~------~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~ 92 (643)
T 1jnr_A 19 EVVETDILIIGGGFSGCGAAYEAAYWAKL------GGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDY 92 (643)
T ss_dssp EEEECSEEEECCSHHHHHHHHHHHHHHTT------TTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHH
T ss_pred eeccCCEEEECcCHHHHHHHHHHhhhhhh------CCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHH
Confidence 345789999999999999999999 4 58999999999754322222221 10 0111122
Q ss_pred hhhHHhcCCCCCccc--------hhhhHHHHHhhccCCCCCCCCCCCCCCC--ccccchHHHHHHHHHHHHHc-Cc-EEe
Q psy2240 82 LPDWKDLGAPLNTPV--------HEDKFAYLTKSKRIGIPILPGMPMNNHG--NYVVRLGHVVKWLGEQAEAM-GV-EIY 149 (182)
Q Consensus 82 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~-gv-~i~ 149 (182)
+.+.......+.+.. ....+.|+... ...+....+......+ ...+++..+.+.|.+.+++. |+ +|+
T Consensus 93 ~~~~~~~g~~l~d~~~v~~~~~~~~~~i~~l~~~-Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~ 171 (643)
T 1jnr_A 93 VRYVTLDMMGLAREDLVADYARHVDGTVHLFEKW-GLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIY 171 (643)
T ss_dssp HHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEE
T ss_pred HHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHc-CCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEE
Confidence 222222222222210 11233344332 1222111111111111 11234556788888888887 99 999
Q ss_pred cCCccceeEEcCC--CcEEEE
Q psy2240 150 PGIPASEVLYHGD--GSVKGI 168 (182)
Q Consensus 150 ~~~~v~~i~~~~~--g~~~~v 168 (182)
+++.|+++..+++ +.+.|+
T Consensus 172 ~~~~v~~L~~~~~~~g~v~Gv 192 (643)
T 1jnr_A 172 ERVFIFELLKDNNDPNAVAGA 192 (643)
T ss_dssp CSEEEEEEEECTTCTTBEEEE
T ss_pred ecCEEEEEEEcCCccceeEEE
Confidence 9999999987543 266553
No 58
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.53 E-value=1.1e-13 Score=99.58 Aligned_cols=92 Identities=26% Similarity=0.314 Sum_probs=64.2
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC----CCCCccccccccChhHHhhhhhhHHhcCCCCCc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA----EVGGHILSGAVIDPIALNELLPDWKDLGAPLNT 94 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (182)
..+.+||+|||||++|+++|+.|++ .|++|+|||+.+ .++|.... ..
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~vie~~~~~~~~~gg~~~~------------------~~----- 69 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLAR------AEIKPILYEGMMANGIAAGGQLTT------------------TT----- 69 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSBTTBCTTCGGGG------------------SS-----
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEecCCCCCCCcCccccc------------------ch-----
Confidence 3456899999999999999999999 899999999965 23321110 00
Q ss_pred cchhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCC
Q psy2240 95 PVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD 162 (182)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~ 162 (182)
....++.+ ...+.+..+...+.+.+++.|++++.++ |+++..+.+
T Consensus 70 -------------~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~ 114 (338)
T 3itj_A 70 -------------EIENFPGF---------PDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSK 114 (338)
T ss_dssp -------------EECCSTTC---------TTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSS
T ss_pred -------------hhcccCCC---------cccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCC
Confidence 00001000 1234567889999999999999999988 999876443
No 59
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.52 E-value=3.5e-13 Score=103.58 Aligned_cols=140 Identities=26% Similarity=0.343 Sum_probs=80.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cccccC-h-----------hHHhhhhhhHHh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVID-P-----------IALNELLPDWKD 87 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~~-~-----------~~~~~~~~~~~~ 87 (182)
..+||+|||+|++|+++|+.|++ .|.+|+|||+.+..++.+. +++.+. . .....++.++..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~------~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~ 198 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARD------AGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMK 198 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHS------SSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHH
Confidence 35799999999999999999999 8999999999998876653 222210 0 011111222222
Q ss_pred cCCCCCccc--------hhhhHHHHHhhccCCCCCC---CCCCCC---CCCccccchHHHHHHHHHHHHHcCcEEecCCc
Q psy2240 88 LGAPLNTPV--------HEDKFAYLTKSKRIGIPIL---PGMPMN---NHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIP 153 (182)
Q Consensus 88 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~ 153 (182)
.+....+.. ....+.|+... ...+... ...... ...........+...|.+.+++.|++|+++++
T Consensus 199 ~g~~~~~~~~v~~~~~~~~~~i~~l~~~-Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~ 277 (572)
T 1d4d_A 199 GGRNINDPELVKVLANNSSDSIDWLTSM-GADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSR 277 (572)
T ss_dssp HTTTCSCHHHHHHHHHTHHHHHHHHHHH-TCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEE
T ss_pred hcCCCCCHHHHHHHHHccHHHHHHHHhc-CCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCE
Confidence 221111110 11233444332 2222111 110000 00011134668999999999999999999999
Q ss_pred cceeEEcCCCcEEE
Q psy2240 154 ASEVLYHGDGSVKG 167 (182)
Q Consensus 154 v~~i~~~~~g~~~~ 167 (182)
|++|..++++.+.+
T Consensus 278 v~~l~~~~~g~v~G 291 (572)
T 1d4d_A 278 VVRILEDASGKVTG 291 (572)
T ss_dssp EEEEEEC--CCEEE
T ss_pred EEEEEECCCCeEEE
Confidence 99998744255443
No 60
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.52 E-value=1.8e-13 Score=93.84 Aligned_cols=114 Identities=23% Similarity=0.290 Sum_probs=73.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
+++||+|||||++|+.+|+.|++ .|.+|+|||+.....| ....... . ... ....
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~------~g~~v~lie~~~~~~G-~~~~~~~---------~-------~~~---~~~~ 55 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQ------KGVRVGLLTQSLDAVM-MPFLPPK---------P-------PFP---PGSL 55 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTT-CCSSCCC---------S-------CCC---TTCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCCEEEEecCCCcCC-cccCccc---------c-------ccc---hhhH
Confidence 35899999999999999999999 8999999999853332 1110000 0 000 0001
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHc-CcEEecCCccceeEEcCCCcEEEE-------EeCC
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGI-------ATGD 172 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~g~~~~v-------~~~~ 172 (182)
+..+. + .. +. ++..+.+.|.+.+++. |++++ +++|+++..++ +.+.++ ...+
T Consensus 56 ~~~~~-----d----~~-------g~--~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~g~~i~a~ 115 (232)
T 2cul_A 56 LERAY-----D----PK-------DE--RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWEGPPARGE 115 (232)
T ss_dssp HHHHC-----C----TT-------CC--CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTSCCEECS
T ss_pred Hhhhc-----c----CC-------CC--CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECCCCEEECC
Confidence 11110 0 00 11 5678899999999886 99998 57999998644 444333 3457
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
.||.|+|.
T Consensus 116 ~VV~A~G~ 123 (232)
T 2cul_A 116 KVVLAVGS 123 (232)
T ss_dssp EEEECCTT
T ss_pred EEEECCCC
Confidence 88888886
No 61
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.52 E-value=1.2e-13 Score=106.34 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=79.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC-CCCccccc---cccChhHHhhhhhhHHhcCCCCCccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE-VGGHILSG---AVIDPIALNELLPDWKDLGAPLNTPV 96 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~-~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (182)
..+||+|||||++|+++|+.|++ .|.+|+|||+.+. .+. ..+. +......+.+ .+...+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr------~G~kVlLIEk~~~~iG~-~~Cnps~ggia~~~lv~---ei~algg~----- 91 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR------MGQQTLLLTHNIDTLGQ-MSCNPAIGGIGKGHLVK---EVDALGGL----- 91 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTC-CSSSSEEESTTHHHHHH---HHHHTTCS-----
T ss_pred CcCCEEEECChHHHHHHHHHHHh------CCCCEEEEeeccccccc-ccccccccchhhHHHHH---HHHHhccH-----
Confidence 46899999999999999999999 8999999999852 332 1111 1111111111 11111100
Q ss_pred hhhhHHHHHhhccCCCCCCCC--CCCCCCCccccchHHHHHHHHHHHHH-cCcEEecCCccceeEEcCCCcEEEEEe---
Q psy2240 97 HEDKFAYLTKSKRIGIPILPG--MPMNNHGNYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIAT--- 170 (182)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~~~~~g~~~~v~~--- 170 (182)
+..........+..+.. .+........+++..+...|.+.+++ .|++|+ +++|+++.. +++.+.+|.+
T Consensus 92 ----~~~~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~-e~g~V~GV~t~dG 165 (651)
T 3ces_A 92 ----MAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIV-ENDRVVGAVTQMG 165 (651)
T ss_dssp ----HHHHHHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEE-SSSBEEEEEETTS
T ss_pred ----HHHHhhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEe-cCCEEEEEEECCC
Confidence 01111111111111110 01111112357788899999999988 699994 679999986 4455555443
Q ss_pred ----CCEEEecCCC
Q psy2240 171 ----GDVGIAKDGS 180 (182)
Q Consensus 171 ----~~~vi~adG~ 180 (182)
++.||.|+|.
T Consensus 166 ~~I~Ad~VVLATGt 179 (651)
T 3ces_A 166 LKFRAKAVVLTVGT 179 (651)
T ss_dssp EEEEEEEEEECCST
T ss_pred CEEECCEEEEcCCC
Confidence 3567777765
No 62
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.52 E-value=5e-14 Score=102.58 Aligned_cols=145 Identities=16% Similarity=0.212 Sum_probs=82.0
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc------ccccccCh-------hH----Hhhhh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI------LSGAVIDP-------IA----LNELL 82 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~------~~~~~~~~-------~~----~~~~~ 82 (182)
..++||+|||||++|+++|++|++ +|.+|+||||.....|.+ .+++.+.+ .. ..+.+
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~------~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~ 77 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILAR------KGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTF 77 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh------CCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHH
Confidence 346899999999999999999999 899999999987544311 12222111 01 11112
Q ss_pred hhHHhcCCC-CCcc------c-h-h--hhHHHHHhhccCCCCCCCC--CC-----CCCCCccccchHHHHHHHHHHHHHc
Q psy2240 83 PDWKDLGAP-LNTP------V-H-E--DKFAYLTKSKRIGIPILPG--MP-----MNNHGNYVVRLGHVVKWLGEQAEAM 144 (182)
Q Consensus 83 ~~~~~~~~~-~~~~------~-~-~--~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~l~~~l~~~~~~~ 144 (182)
..|...... .... + . . ....+... ....+..+.. .| ... ....+++..+...|.+.+++.
T Consensus 78 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~l~~~~~p~~~~g~~~-~~~~v~p~~~~~~l~~~~~~~ 155 (363)
T 1c0p_A 78 KKWVELVPTGHAMWLKGTRRFAQNEDGLLGHWYKD-ITPNYRPLPSSECPPGAIGVTY-DTLSVHAPKYCQYLARELQKL 155 (363)
T ss_dssp HHHHHHTTTTSSEEEEEEEEEESSGGGGGGGTTTT-TSTTCEECCGGGSSTTCEEEEE-EEEECCHHHHHHHHHHHHHHT
T ss_pred HHHHHhCcccCCeEEECCEEEEecCccchhHHHHH-hCCCcEECCHHHCCCceEEEEE-ecceecHHHHHHHHHHHHHHC
Confidence 233332111 0000 0 0 0 00001000 0000111100 00 000 245789999999999999999
Q ss_pred CcEEecCCccceeEEcCCCcEEEEEeCCEEEecCCC
Q psy2240 145 GVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGS 180 (182)
Q Consensus 145 gv~i~~~~~v~~i~~~~~g~~~~v~~~~~vi~adG~ 180 (182)
|++|++ ++|+++..+ . . .++.||.|+|.
T Consensus 156 G~~i~~-~~v~~l~~~---~--~--~a~~VV~A~G~ 183 (363)
T 1c0p_A 156 GATFER-RTVTSLEQA---F--D--GADLVVNATGL 183 (363)
T ss_dssp TCEEEE-CCCSBGGGT---C--S--SCSEEEECCGG
T ss_pred CCEEEE-EEcccHhhc---C--c--CCCEEEECCCc
Confidence 999999 999998642 1 1 56778877775
No 63
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.51 E-value=1.1e-13 Score=99.60 Aligned_cols=40 Identities=33% Similarity=0.532 Sum_probs=36.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
++||+|||||++|+++|+.|++ .|++|+||||.+.+++..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~------~G~~V~vlE~~~~~gg~~ 41 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA------AGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGGG
T ss_pred CceEEEECCcHHHHHHHHHHHH------CCCcEEEEECCCCCcccc
Confidence 3699999999999999999999 899999999998777654
No 64
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.51 E-value=1.7e-13 Score=102.41 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=31.7
Q ss_pred ccccchHHHHHHHHHHHHHcCcEEecCCccceeEE
Q psy2240 125 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLY 159 (182)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~ 159 (182)
...+++..+.+.|.+.+++.|++|+++++|++|..
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~ 209 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVEL 209 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEE
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEe
Confidence 45678889999999999999999999999999986
No 65
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.51 E-value=4.3e-14 Score=108.17 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=46.0
Q ss_pred ccccchHHHHHHHHHHHHHc-CcEEecCCccceeEEcCCCcEEEE-------EeCCEEEecCCC
Q psy2240 125 NYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKGI-------ATGDVGIAKDGS 180 (182)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~g~~~~v-------~~~~~vi~adG~ 180 (182)
.+.+++..+.+.|.+.+++. |++++++ +|+++..++++.++++ ...++||.|+|.
T Consensus 188 ~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~ 250 (550)
T 2e4g_A 188 AWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGF 250 (550)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGG
T ss_pred ceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCC
Confidence 56799999999999999988 9999999 9999987666655443 446899999996
No 66
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.49 E-value=6.5e-15 Score=107.97 Aligned_cols=134 Identities=20% Similarity=0.168 Sum_probs=78.5
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCC--CceEEEEecCCCCCCccccccccChhHHhhhh--hhH-HhcCCCCCccc-h
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGK--ELKVCLVEKAAEVGGHILSGAVIDPIALNELL--PDW-KDLGAPLNTPV-H 97 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~--g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~-~ 97 (182)
||+|||||++|+++|+.|++ . |++|+||||.+..... ..+..+.+..+.... ..+ .. .+.... .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~------~~~G~~V~v~E~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 71 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQ------ARPLWAIDIVEKNDEQEVL-GWGVVLPGRPGQHPANPLSYLDA---PERLNPQF 71 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HCTTSEEEEECSSCTTCCC-CSEEEEESCTTTCTTCGGGGSSC---GGGGCCEE
T ss_pred eEEEECCCHHHHHHHHHHHh------cCCCCCEEEEECCCCCCcc-eeEEEeCcHHHHhhcCcchhhhh---hHHHhhcc
Confidence 79999999999999999999 6 9999999998765210 011111111111000 001 00 000000 0
Q ss_pred hhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEEEeCCEEEec
Q psy2240 98 EDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAK 177 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v~~~~~vi~a 177 (182)
...+.+.. .+ ..+. .. .....+.+++..+.+.|.+.+++.|++++++++|++++.. . ....++||+|
T Consensus 72 ~~~~~~~~-~g-~~~~--~~---~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~----~~~ad~vV~A 138 (381)
T 3c4a_A 72 LEDFKLVH-HN-EPSL--MS---TGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL--P----LADYDLVVLA 138 (381)
T ss_dssp ECCEEEEE-SS-SEEE--CC---CCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC--C----GGGCSEEEEC
T ss_pred ccceEEEe-CC-eeEE--ec---CCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc--c----cccCCEEEEC
Confidence 00000000 00 0000 00 0112457899999999999999899999999999998642 1 2357999999
Q ss_pred CCC
Q psy2240 178 DGS 180 (182)
Q Consensus 178 dG~ 180 (182)
||.
T Consensus 139 dG~ 141 (381)
T 3c4a_A 139 NGV 141 (381)
T ss_dssp CGG
T ss_pred CCC
Confidence 996
No 67
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.49 E-value=6.1e-14 Score=104.87 Aligned_cols=146 Identities=15% Similarity=0.134 Sum_probs=81.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCCCCCCccccccccChh-HHh---hhh---hhHH-----
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAAEVGGHILSGAVIDPI-ALN---ELL---PDWK----- 86 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~~~~g~~~~~~~~~~~-~~~---~~~---~~~~----- 86 (182)
..+||+|||||++|+++|+.|++ .|. +|+|||+.+..+|.+......... .+. ... ..+.
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~------~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~ 78 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA------EKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALP 78 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCC
T ss_pred CCCEEEEECccHHHHHHHHHHHh------cCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccC
Confidence 45799999999999999999999 888 999999998877654322110000 000 000 0000
Q ss_pred hcCCCCCccchhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE
Q psy2240 87 DLGAPLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK 166 (182)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~ 166 (182)
.........+.......... +.+++........+++..+.++|.+.+++.+..++++++|+++..+++++.+
T Consensus 79 ~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V 150 (447)
T 2gv8_A 79 VYPSPLYRDLQTNTPIELMG--------YCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVV 150 (447)
T ss_dssp BCCCCCCTTCBCSSCHHHHS--------CTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEE
T ss_pred CccCchhhhhccCCCHHHhc--------cCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEE
Confidence 00000000000000000000 0111111111334567789999999998878889999999999764443322
Q ss_pred E-----------EEeCCEEEecCCC
Q psy2240 167 G-----------IATGDVGIAKDGS 180 (182)
Q Consensus 167 ~-----------v~~~~~vi~adG~ 180 (182)
. ....+.||.|+|+
T Consensus 151 ~~~~~~~G~~~~~~~~d~VVvAtG~ 175 (447)
T 2gv8_A 151 TYKGTKAGSPISKDIFDAVSICNGH 175 (447)
T ss_dssp EEEESSTTCCEEEEEESEEEECCCS
T ss_pred EEeecCCCCeeEEEEeCEEEECCCC
Confidence 2 2334677777775
No 68
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.49 E-value=2.9e-13 Score=103.88 Aligned_cols=140 Identities=18% Similarity=0.197 Sum_probs=79.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC-CCCCccc--cccccChhHHhhhhhhHHhcCCCCCccch
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA-EVGGHIL--SGAVIDPIALNELLPDWKDLGAPLNTPVH 97 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~-~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (182)
..+||+|||||++|+++|+.|++ .|.+|+|||+.+ ..+.... +.+.+....+.+. ....+..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr------~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~e---ldalgg~------ 90 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAAR------MGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVRE---IDALGGE------ 90 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHH---HHHHTCS------
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCCEEEEEecccccCCcCccccccccchHHHHHH---HHHhhhH------
Confidence 46899999999999999999999 899999999985 3332111 1111111111111 1111100
Q ss_pred hhhHHHHHhhccCCCCCCC--CCCCCCCCccccchHHHHHHHHHHHHH-cCcEEecCCccceeEEcCCCcEEEEEe----
Q psy2240 98 EDKFAYLTKSKRIGIPILP--GMPMNNHGNYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIAT---- 170 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~~~~~g~~~~v~~---- 170 (182)
+..........+..+. ..+........+++..+.+.|.+.+++ .|++|+ +++|+++.. +++.+.+|.+
T Consensus 91 ---~~~~~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~-e~g~V~GV~t~dG~ 165 (637)
T 2zxi_A 91 ---MGKAIDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIV-KNNQVVGVRTNLGV 165 (637)
T ss_dssp ---HHHHHHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEE-SSSBEEEEEETTSC
T ss_pred ---HHHHhhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEe-cCCEEEEEEECCCc
Confidence 0111111111111110 001111112356788899999999988 599995 679999986 4455655543
Q ss_pred ---CCEEEecCCC
Q psy2240 171 ---GDVGIAKDGS 180 (182)
Q Consensus 171 ---~~~vi~adG~ 180 (182)
++.||.|+|.
T Consensus 166 ~i~AdaVVLATG~ 178 (637)
T 2zxi_A 166 EYKTKAVVVTTGT 178 (637)
T ss_dssp EEECSEEEECCTT
T ss_pred EEEeCEEEEccCC
Confidence 4567777664
No 69
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.48 E-value=8.5e-13 Score=101.87 Aligned_cols=139 Identities=22% Similarity=0.208 Sum_probs=75.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCC--ceEEEEecCCCCCCccc--ccccc---C-hhHHhhhhhhHHhcCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKE--LKVCLVEKAAEVGGHIL--SGAVI---D-PIALNELLPDWKDLGAPL 92 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g--~~v~vlE~~~~~~g~~~--~~~~~---~-~~~~~~~~~~~~~~~~~~ 92 (182)
.++||+|||||++|+++|+.|++ .| .+|+||||.+..++.+. .++.. . .......+.+....+..+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~------~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~ 77 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQ------ANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWL 77 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH------HCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTC
T ss_pred ccCCEEEECCCHHHHHHHHHHHh------cCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 46899999999999999999999 78 99999999876554332 12211 0 011111111111111111
Q ss_pred Cccc--------hhhhHHHHHhhccCCCCCCCCC--CCCCCCccc---------cchHHHHHHHHHHHHHcC-cEEecCC
Q psy2240 93 NTPV--------HEDKFAYLTKSKRIGIPILPGM--PMNNHGNYV---------VRLGHVVKWLGEQAEAMG-VEIYPGI 152 (182)
Q Consensus 93 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------~~~~~l~~~l~~~~~~~g-v~i~~~~ 152 (182)
.+.. ....+.|+... ...+...... .....++.. .....+...|.+.+++.| ++|++++
T Consensus 78 ~d~~~v~~~~~~~~~~i~~L~~~-Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~ 156 (602)
T 1kf6_A 78 CEQDVVDYFVHHCPTEMTQLELW-GCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEH 156 (602)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHT-TCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHc-CCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCC
Confidence 1110 11223333221 1222111110 000000111 124578999999998888 9999999
Q ss_pred ccceeEEcCCCcEEE
Q psy2240 153 PASEVLYHGDGSVKG 167 (182)
Q Consensus 153 ~v~~i~~~~~g~~~~ 167 (182)
+|+++..+ ++.+.+
T Consensus 157 ~v~~l~~~-~g~v~G 170 (602)
T 1kf6_A 157 FVLDILVD-DGHVRG 170 (602)
T ss_dssp EEEEEEEE-TTEEEE
T ss_pred EEEEEEEe-CCEEEE
Confidence 99999874 344443
No 70
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.47 E-value=4.9e-13 Score=95.52 Aligned_cols=88 Identities=22% Similarity=0.256 Sum_probs=63.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
+.+||+|||||++|+++|+.|++ .|++|+|||+. .+|....
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~--~gg~~~~------------------------------- 54 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSAR------YMLKTLVIGET--PGGQLTE------------------------------- 54 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESS--TTGGGGG-------------------------------
T ss_pred CccCEEEECccHHHHHHHHHHHH------CCCcEEEEecc--CCCeecc-------------------------------
Confidence 35799999999999999999999 89999999998 5543221
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCC
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG 163 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g 163 (182)
......++. ...+.+..+...+.+.+++.|+++++ ++|+++..+++.
T Consensus 55 -----~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~ 101 (323)
T 3f8d_A 55 -----AGIVDDYLG----------LIEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDE 101 (323)
T ss_dssp -----CCEECCSTT----------STTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--C
T ss_pred -----cccccccCC----------CCCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCE
Confidence 000000110 11145678889999999989999999 899999764433
No 71
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.47 E-value=2e-12 Score=99.37 Aligned_cols=41 Identities=27% Similarity=0.460 Sum_probs=36.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
.++||+|||||++|+++|+.|++ +|++|+|||+....+|.+
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~------rG~~V~LlE~~~~~~GtS 71 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAA------SGIKTGLIEMQDFAEGTS 71 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSTTCSGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCCCCCCCcc
Confidence 46899999999999999999999 899999999997666654
No 72
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.46 E-value=4.6e-13 Score=102.19 Aligned_cols=136 Identities=18% Similarity=0.202 Sum_probs=66.6
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-cccccC-----hhHHhhhhhhHHhcCCCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVID-----PIALNELLPDWKDLGAPLN 93 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~ 93 (182)
+.++||+|||||++|+++|+.|++ |.+|+||||.+..++.+. +++.+. .......+.++...+..+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-------G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~ 78 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-------QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGIC 78 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-------TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCC
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-------CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccC
Confidence 346899999999999999999975 789999999987665442 222221 1122222222222222222
Q ss_pred ccc--------hhhhHHHHHhhccCCCCCCC----C--CCCCCCCcc---------ccchHHHHHHHHHHHHH-cCcEEe
Q psy2240 94 TPV--------HEDKFAYLTKSKRIGIPILP----G--MPMNNHGNY---------VVRLGHVVKWLGEQAEA-MGVEIY 149 (182)
Q Consensus 94 ~~~--------~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~---------~~~~~~l~~~l~~~~~~-~gv~i~ 149 (182)
+.. ....+.|+... ...+.... . +.....++. ...+..+.+.|.+.+++ .|++|+
T Consensus 79 d~~~v~~~~~~~~~~i~~l~~~-Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~ 157 (540)
T 1chu_A 79 DRHAVEFVASNARSCVQWLIDQ-GVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVL 157 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT-TCC--------------------------------------CCCHHHHHHCTTEEEE
T ss_pred CHHHHHHHHHhHHHHHHHHHHc-CCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEE
Confidence 110 11233344322 12221111 0 000000000 11334677888888888 799999
Q ss_pred cCCccceeEEcCCC
Q psy2240 150 PGIPASEVLYHGDG 163 (182)
Q Consensus 150 ~~~~v~~i~~~~~g 163 (182)
++++|+++..++++
T Consensus 158 ~~~~v~~L~~~~~g 171 (540)
T 1chu_A 158 ERTNAVDLIVSDKI 171 (540)
T ss_dssp CSEEEEEEEEGGGT
T ss_pred eCcEEEEEEEcCCC
Confidence 99999999874334
No 73
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.46 E-value=3.6e-13 Score=98.08 Aligned_cols=134 Identities=16% Similarity=0.206 Sum_probs=74.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
..+||+|||||++|+++|+.|++ .|. +|+|||+.+ .++..... ......+.......
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~------~g~~~v~lie~~~-~Gg~~~~~---------------~~~~~~~~~~~~~~ 60 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD------FGITDVIILEKGT-VGHSFKHW---------------PKSTRTITPSFTSN 60 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSS-TTHHHHTS---------------CTTCBCSSCCCCCG
T ss_pred ccCcEEEECcCHHHHHHHHHHHH------cCCCcEEEEecCC-CCCccccC---------------cccccccCcchhcc
Confidence 35799999999999999999999 898 999999987 55422110 00000000000000
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCCEEE
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGDVGI 175 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~~vi 175 (182)
.+.. ..+........+........+++..+..++.+.+++.|++++++++|+++..+++++.+. ....+.||
T Consensus 61 ~~g~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~~~d~vV 136 (369)
T 3d1c_A 61 GFGM----PDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTETYHADYIF 136 (369)
T ss_dssp GGTC----CCTTCSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCCEEEEEEE
T ss_pred cCCc----hhhhhccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCCEEEeCEEE
Confidence 0000 000000000000000002234566788888888888999999999999998754444332 12234555
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|+
T Consensus 137 lAtG~ 141 (369)
T 3d1c_A 137 VATGD 141 (369)
T ss_dssp ECCCS
T ss_pred ECCCC
Confidence 55554
No 74
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.46 E-value=6.6e-13 Score=96.53 Aligned_cols=113 Identities=21% Similarity=0.294 Sum_probs=74.9
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchh
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHE 98 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (182)
|+..+||+|||||++|+++|+.|++ .|++|+|||+.+..+|... ... +.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gg~~~------------------~~~-~~------ 59 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGM------NNISCRIIESMPQLGGQLA------------------ALY-PE------ 59 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHH------------------HTC-TT------
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh------CCCCEEEEecCCCCCCccc------------------ccC-CC------
Confidence 3456899999999999999999999 8999999999877654221 000 00
Q ss_pred hhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCc-EEE-----EEeCC
Q psy2240 99 DKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGS-VKG-----IATGD 172 (182)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~-~~~-----v~~~~ 172 (182)
...+..+. ...+++..+.+.|.+.+++.+++++++++|+++..++++. .+. ....+
T Consensus 60 --------~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~ 121 (360)
T 3ab1_A 60 --------KHIYDVAG----------FPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSR 121 (360)
T ss_dssp --------SEECCSTT----------CSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEE
T ss_pred --------cccccCCC----------CCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEee
Confidence 00000000 1124567888899998988899999999999998754422 221 22345
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
.+|.|+|.
T Consensus 122 ~li~AtG~ 129 (360)
T 3ab1_A 122 AVLIAAGL 129 (360)
T ss_dssp EEEECCTT
T ss_pred EEEEccCC
Confidence 66666665
No 75
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.46 E-value=1.2e-12 Score=93.55 Aligned_cols=108 Identities=20% Similarity=0.202 Sum_probs=70.6
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchh
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHE 98 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (182)
|+..+||+|||||++|+++|+.|++ .|++|+|||+. ..+|.......
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~-~~gg~~~~~~~-------------------------- 59 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAAR------SGFSVAILDKA-VAGGLTAEAPL-------------------------- 59 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-STTGGGGGCSC--------------------------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHh------CCCcEEEEeCC-CCCccccccch--------------------------
Confidence 4557899999999999999999999 89999999995 44432210000
Q ss_pred hhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCCEE
Q psy2240 99 DKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGDVG 174 (182)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~~v 174 (182)
...+ +.+ ..+++..+.+.+.+.+++.|+++++ .+|+++..+.+...+. ....+.+
T Consensus 60 -------------~~~~---~~~----~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~~~~~~~~l 118 (319)
T 3cty_A 60 -------------VENY---LGF----KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIETNDDTYHAKYV 118 (319)
T ss_dssp -------------BCCB---TTB----SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEESSSEEEEEEE
T ss_pred -------------hhhc---CCC----cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEECCCEEEeCEE
Confidence 0000 000 1234557788888888888999988 6898887644322221 1234667
Q ss_pred EecCCC
Q psy2240 175 IAKDGS 180 (182)
Q Consensus 175 i~adG~ 180 (182)
|.|+|.
T Consensus 119 i~AtG~ 124 (319)
T 3cty_A 119 IITTGT 124 (319)
T ss_dssp EECCCE
T ss_pred EECCCC
Confidence 777664
No 76
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.46 E-value=8.5e-13 Score=101.54 Aligned_cols=142 Identities=14% Similarity=0.150 Sum_probs=78.7
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC-CCCCccc--cccccChhHHhhhhhhHHhcCCCCCcc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA-EVGGHIL--SGAVIDPIALNELLPDWKDLGAPLNTP 95 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~-~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (182)
+...+||+|||||++|+++|+.|++ .|.+|+|||+.+ ..++... +.+.+....+.+.+..|.. ..
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr------~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g---~~--- 85 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVAR------GGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGG---EM--- 85 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTC---SH---
T ss_pred ccCcCCEEEECccHHHHHHHHHHHH------CCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhccc---HH---
Confidence 4456899999999999999999999 899999999985 2333211 1111111112122221110 00
Q ss_pred chhhhHHHHHhhccCCCCCCC--CCCCCCCCccccchHHHHHHHHHHHHH-cCcEEecCCccceeEEcCCCcEEEEEe--
Q psy2240 96 VHEDKFAYLTKSKRIGIPILP--GMPMNNHGNYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVLYHGDGSVKGIAT-- 170 (182)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~~~~~g~~~~v~~-- 170 (182)
..+... ....+..+. ..+........+++..+...|.+.+++ .|++++. .+|+++..+ ++.+.+|.+
T Consensus 86 -----~~~~d~-~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d-~g~V~GV~t~~ 157 (641)
T 3cp8_A 86 -----GKAIDA-TGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSAN-SGKFSSVTVRS 157 (641)
T ss_dssp -----HHHHHH-HEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEE-TTEEEEEEETT
T ss_pred -----HHHHHh-cCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEec-CCEEEEEEECC
Confidence 011111 111111110 001111112467888999999999987 4899964 589998763 445554443
Q ss_pred -----CCEEEecCCC
Q psy2240 171 -----GDVGIAKDGS 180 (182)
Q Consensus 171 -----~~~vi~adG~ 180 (182)
++.||.|+|.
T Consensus 158 G~~i~Ad~VVLATG~ 172 (641)
T 3cp8_A 158 GRAIQAKAAILACGT 172 (641)
T ss_dssp SCEEEEEEEEECCTT
T ss_pred CcEEEeCEEEECcCC
Confidence 3456666664
No 77
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.45 E-value=4.5e-12 Score=83.41 Aligned_cols=103 Identities=24% Similarity=0.351 Sum_probs=71.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
+|++|||||++|+.+|..|++ .|.+|+|+|+.+..-... ..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~------~g~~v~lie~~~~~~~~~----------------------~~----------- 42 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLAR------AGLKVLVLDGGRSKVKGV----------------------SR----------- 42 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSCCTTTTC----------------------SC-----------
T ss_pred CeEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCCCcccCc----------------------hh-----------
Confidence 689999999999999999999 899999999986211000 00
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCCEEEecC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGDVGIAKD 178 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~~vi~ad 178 (182)
...++.++ ..+....+.+.+.+.+++.|++++++ +|++++.++++..+. ....+.||.|.
T Consensus 43 ---------~~~~~~~~------~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g~i~ad~vI~A~ 106 (180)
T 2ywl_A 43 ---------VPNYPGLL------DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEGVEKAERLLLCT 106 (180)
T ss_dssp ---------CCCSTTCT------TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSCEEEEEEEEECC
T ss_pred ---------hhccCCCc------CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCCEEEECEEEECC
Confidence 00000000 12345688899999999999999999 999998754443221 23457777777
Q ss_pred CC
Q psy2240 179 GS 180 (182)
Q Consensus 179 G~ 180 (182)
|.
T Consensus 107 G~ 108 (180)
T 2ywl_A 107 HK 108 (180)
T ss_dssp TT
T ss_pred CC
Confidence 75
No 78
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.45 E-value=1.2e-12 Score=93.92 Aligned_cols=93 Identities=24% Similarity=0.360 Sum_probs=67.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..+|.... .++ .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gG~~~~-----------~~~---~------------- 52 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGM------RQASVKIIESLPQLGGQLSA-----------LYP---E------------- 52 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCHHHHH-----------HCT---T-------------
T ss_pred ccceEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCceehh-----------cCC---C-------------
Confidence 45799999999999999999999 89999999999877643210 000 0
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCC
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGD 162 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~ 162 (182)
......+. ...+.+..+...+.+.+++.+++++++++|+++..+++
T Consensus 53 ------~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 98 (332)
T 3lzw_A 53 ------KYIYDVAG----------FPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQAD 98 (332)
T ss_dssp ------SEECCSTT----------CSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTT
T ss_pred ------ceEeccCC----------CCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCC
Confidence 00000100 11245678899999999889999999999999987554
No 79
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.44 E-value=7.4e-12 Score=94.16 Aligned_cols=147 Identities=20% Similarity=0.207 Sum_probs=78.8
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc-ccccc----Ch-hHHhhhhhhHHhcCCCCCccc-
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL-SGAVI----DP-IALNELLPDWKDLGAPLNTPV- 96 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~-~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~- 96 (182)
||+|||||++|+++|+.|++ .|.+|+||||. ..++.+. +.+.+ .. ......+.+....+..+.+..
T Consensus 1 DVvVIG~G~AGl~aA~~la~------~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~ 73 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR------AGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKT 73 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH------TTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHH
T ss_pred CEEEECCCHHHHHHHHHHHH------CCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHH
Confidence 79999999999999999999 89999999999 5555432 22211 11 111111111111111111110
Q ss_pred -------hhhhHHHHHhhccCCCCC-CC--CCCCCCCC--ccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCc
Q psy2240 97 -------HEDKFAYLTKSKRIGIPI-LP--GMPMNNHG--NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGS 164 (182)
Q Consensus 97 -------~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~--~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~ 164 (182)
....+.++... ...+.. .. ........ ........+.+.|.+.+++.|++++++++| ++..+ ++.
T Consensus 74 v~~~~~~~~~~i~~l~~~-Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~ 150 (472)
T 2e5v_A 74 VNYVTSEAKNVIETFESW-GFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGK 150 (472)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTE
T ss_pred HHHHHHHHHHHHHHHHHc-CCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCE
Confidence 11223333221 121211 00 00000000 012245678899999998889999999999 99764 455
Q ss_pred EEEEEe--------CCEEEecCCC
Q psy2240 165 VKGIAT--------GDVGIAKDGS 180 (182)
Q Consensus 165 ~~~v~~--------~~~vi~adG~ 180 (182)
+.++.. .+.||.|+|.
T Consensus 151 v~Gv~v~~~~g~~~a~~VVlAtGg 174 (472)
T 2e5v_A 151 VTGFVTEKRGLVEDVDKLVLATGG 174 (472)
T ss_dssp EEEEEETTTEEECCCSEEEECCCC
T ss_pred EEEEEEEeCCCeEEeeeEEECCCC
Confidence 544322 3555555554
No 80
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.43 E-value=1.9e-12 Score=93.03 Aligned_cols=108 Identities=23% Similarity=0.223 Sum_probs=70.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC----CCCCCccccccccChhHHhhhhhhHHhcCCCCCccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA----AEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPV 96 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+. ...++... ...
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~------~g~~v~lie~~~~~~~~~gg~~~------------------~~~------- 55 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR------AELKPLLFEGWMANDIAPGGQLT------------------TTT------- 55 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSBTTBCTTCGGG------------------GCS-------
T ss_pred CCCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeccCccccCCCceee------------------ecc-------
Confidence 45799999999999999999999 89999999982 22222110 000
Q ss_pred hhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCC
Q psy2240 97 HEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGD 172 (182)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~ 172 (182)
.....+.+ ...+++..+...|.+.+++.|++++.++ |+++..+.+.+.+. ....+
T Consensus 56 -----------~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~~~~~~~~~ 114 (333)
T 1vdc_A 56 -----------DVENFPGF---------PEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFTDSKAILAD 114 (333)
T ss_dssp -----------EECCSTTC---------TTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEECSSEEEEEE
T ss_pred -----------ccccCCCC---------ccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEECCcEEEcC
Confidence 00001100 1224567888899988988999999986 88887644433221 23446
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
.+|.|+|.
T Consensus 115 ~vv~A~G~ 122 (333)
T 1vdc_A 115 AVILAIGA 122 (333)
T ss_dssp EEEECCCE
T ss_pred EEEECCCC
Confidence 67777764
No 81
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.43 E-value=3e-12 Score=92.08 Aligned_cols=111 Identities=27% Similarity=0.257 Sum_probs=73.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..+|... .. .+. .
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~gg~~~------------------~~-~~~-~------ 51 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGM------RGLSFRFVDPLPEPGGQLT------------------AL-YPE-K------ 51 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSCHHHH------------------HT-CTT-S------
T ss_pred CcCcEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCCCCCeee------------------cc-CCC-c------
Confidence 45899999999999999999999 8999999999877664221 00 000 0
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCCEEE
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGDVGI 175 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi 175 (182)
..+..+. ...+.+..+...|.+.+++.+++++++++|+++..+++.+.+. ....+.+|
T Consensus 52 -------~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv 114 (335)
T 2zbw_A 52 -------YIYDVAG----------FPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVI 114 (335)
T ss_dssp -------EECCSTT----------CSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEE
T ss_pred -------eeeccCC----------CCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEE
Confidence 0000000 1124556788888888888899999999999987644322221 12335566
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 115 ~AtG~ 119 (335)
T 2zbw_A 115 IAAGV 119 (335)
T ss_dssp ECCTT
T ss_pred ECCCC
Confidence 66664
No 82
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.43 E-value=4.5e-12 Score=96.86 Aligned_cols=127 Identities=20% Similarity=0.268 Sum_probs=79.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCC-ccchhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLN-TPVHED 99 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 99 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..||... ....+-. ......
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~------~g~~v~iiE~~~~~GGtw~------------------~~~yPg~~~d~~~~ 63 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQ------AGMKVLGIEAGEDVGGTWY------------------WNRYPGCRLDTESY 63 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHH------------------HCCCTTCBCSSCHH
T ss_pred CCCCEEEECccHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccc------------------cCCCCceeecCchh
Confidence 45799999999999999999999 8999999999988776421 1111100 000111
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCc--EEecCCccceeEEcCCCcEEE-------EEe
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKG-------IAT 170 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~i~~~~~v~~i~~~~~g~~~~-------v~~ 170 (182)
.+......... .. +.......++.++..++.+.+++.++ .++++++|+++..+++...+. ...
T Consensus 64 ~y~~~f~~~~~-----~~---~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ 135 (545)
T 3uox_A 64 AYGYFALKGII-----PE---WEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVT 135 (545)
T ss_dssp HHCHHHHTTSS-----TT---CCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEE
T ss_pred hcccccCcccc-----cC---CCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEE
Confidence 11111111100 00 11113345677899999999988887 799999999998755432222 234
Q ss_pred CCEEEecCC
Q psy2240 171 GDVGIAKDG 179 (182)
Q Consensus 171 ~~~vi~adG 179 (182)
.+.||.|.|
T Consensus 136 ad~lV~AtG 144 (545)
T 3uox_A 136 CRFLISATG 144 (545)
T ss_dssp EEEEEECCC
T ss_pred eCEEEECcC
Confidence 567777777
No 83
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.43 E-value=4.7e-12 Score=90.76 Aligned_cols=108 Identities=26% Similarity=0.330 Sum_probs=71.5
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
+..+||+|||||++|+++|+.|++ .|++|+|||+. ..+|.......
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~------~g~~v~lie~~-~~gg~~~~~~~--------------------------- 51 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGR------AQLSTLILEKG-MPGGQIAWSEE--------------------------- 51 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-CTTGGGGGCSC---------------------------
T ss_pred cccCCEEEECCCHHHHHHHHHHHH------cCCcEEEEeCC-CCCcccccccc---------------------------
Confidence 346899999999999999999999 89999999998 45543211000
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEc--CCC-cEEE-----EEeC
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYH--GDG-SVKG-----IATG 171 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~--~~g-~~~~-----v~~~ 171 (182)
....+.+ ...+++..+.+.+.+.+++.|+++++ .+|+++..+ ++. +.+. ....
T Consensus 52 ------------~~~~~~~------~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~ 112 (325)
T 2q7v_A 52 ------------VENFPGF------PEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRA 112 (325)
T ss_dssp ------------BCCSTTC------SSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEE
T ss_pred ------------cccCCCC------CCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEe
Confidence 0000000 11245567888898889889999987 589888764 332 2221 2334
Q ss_pred CEEEecCCC
Q psy2240 172 DVGIAKDGS 180 (182)
Q Consensus 172 ~~vi~adG~ 180 (182)
+.+|.|+|.
T Consensus 113 ~~vv~AtG~ 121 (325)
T 2q7v_A 113 KAVILATGA 121 (325)
T ss_dssp EEEEECCCE
T ss_pred CEEEECcCC
Confidence 666666664
No 84
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.42 E-value=8.3e-14 Score=100.99 Aligned_cols=49 Identities=16% Similarity=0.269 Sum_probs=38.5
Q ss_pred ccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEEEeCCEEEecCCC
Q psy2240 125 NYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIATGDVGIAKDGS 180 (182)
Q Consensus 125 ~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v~~~~~vi~adG~ 180 (182)
...+++..+.+.|.+.+++.|++|++ ++|++++.+.+ ...+.||.|+|.
T Consensus 136 ~~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~~------~~a~~VV~A~G~ 184 (351)
T 3g3e_A 136 SLILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVAR------EGADVIVNCTGV 184 (351)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHHH------TTCSEEEECCGG
T ss_pred ceEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhhc------CCCCEEEECCCc
Confidence 35788999999999999999999999 89999864321 235777777775
No 85
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.42 E-value=1.1e-12 Score=100.33 Aligned_cols=129 Identities=19% Similarity=0.221 Sum_probs=79.8
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
...+||+|||||++|+++|+.|++ .|++|+|||+.+..+|........ .. ..+.. ...+...+...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~------~G~~v~iiE~~~~~GGtw~~~~yp--g~----~~dv~--s~~y~~~f~~~ 84 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRS------QGLTVRAFEAASGVGGVWYWNRYP--GA----RCDVE--SIDYSYSFSPE 84 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCCT--TC----BCSSC--TTTSSCCSCHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHh------CCCCEEEEeCCCCCCCccccCCCC--Cc----eeCCC--chhcccccccc
Confidence 346899999999999999999999 899999999998877643211000 00 00000 00000000000
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCc--EEecCCccceeEEcCCCcEEEE-------Ee
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGI-------AT 170 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~i~~~~~v~~i~~~~~g~~~~v-------~~ 170 (182)
..... . ......++.++..++.+.+++.++ .++++++|+++..+++...+.| ..
T Consensus 85 ----~~~~~----~---------~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ 147 (549)
T 4ap3_A 85 ----LEQEW----N---------WSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVS 147 (549)
T ss_dssp ----HHHHC----C---------CSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEE
T ss_pred ----cccCC----C---------CccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEE
Confidence 00000 0 012345677899999999999887 8999999999987665433322 34
Q ss_pred CCEEEecCC
Q psy2240 171 GDVGIAKDG 179 (182)
Q Consensus 171 ~~~vi~adG 179 (182)
.+.||.|.|
T Consensus 148 ad~lV~AtG 156 (549)
T 4ap3_A 148 ARFLVVAAG 156 (549)
T ss_dssp EEEEEECCC
T ss_pred eCEEEECcC
Confidence 577777777
No 86
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.41 E-value=3.6e-12 Score=90.78 Aligned_cols=105 Identities=26% Similarity=0.299 Sum_probs=70.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
+||+|||||++|+++|+.|++ .|. +|+|||+. ..+|.......
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~~v~lie~~-~~gg~~~~~~~----------------------------- 45 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATR------GGVKNAVLFEKG-MPGGQITGSSE----------------------------- 45 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCSSEEEECSS-STTCGGGGCSC-----------------------------
T ss_pred ceEEEECccHHHHHHHHHHHH------CCCCcEEEEcCC-CCCcccccccc-----------------------------
Confidence 699999999999999999999 899 99999996 34442211000
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCCEEEe
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGDVGIA 176 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi~ 176 (182)
....+.+ ...+++..+.+.+.+.+++.|++++. ++|+++..+++.+.+. ....+.+|.
T Consensus 46 ----------~~~~~~~------~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~ 108 (311)
T 2q0l_A 46 ----------IENYPGV------KEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVII 108 (311)
T ss_dssp ----------BCCSTTC------CSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEE
T ss_pred ----------cccCCCC------cccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEE
Confidence 0000000 12356678888998888888999988 7899987644322221 233466666
Q ss_pred cCCC
Q psy2240 177 KDGS 180 (182)
Q Consensus 177 adG~ 180 (182)
|+|.
T Consensus 109 AtG~ 112 (311)
T 2q0l_A 109 ATGG 112 (311)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 6664
No 87
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.41 E-value=2.5e-13 Score=94.90 Aligned_cols=40 Identities=33% Similarity=0.532 Sum_probs=37.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
++||+||||||+||++|+.|++ +|++|+||||.+.+||..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~------~G~~V~v~Ek~~~~GG~~ 41 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA------AGHQVHLFDKSRGSGGRM 41 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCCCCCCcc
Confidence 5799999999999999999999 899999999999888754
No 88
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.40 E-value=2.8e-12 Score=91.25 Aligned_cols=37 Identities=24% Similarity=0.521 Sum_probs=32.4
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+.|||+||||||+|+++|+.|++ .|++|+|||+..
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar------~g~~v~lie~~~ 39 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGR------ARKQIALFDNNT 39 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCC
Confidence 3567999999999999999999999 899999999874
No 89
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.40 E-value=8e-12 Score=92.69 Aligned_cols=40 Identities=28% Similarity=0.493 Sum_probs=36.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
.||+|||||++|+++|+.|++ +|.+|+|||+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~------~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSK------AGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHH------TTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHh------CCCceEEEeCCCCCCCcee
Confidence 389999999999999999999 8999999999998887653
No 90
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.40 E-value=1.6e-12 Score=99.13 Aligned_cols=129 Identities=17% Similarity=0.209 Sum_probs=80.5
Q ss_pred ccccEEEECCChHHHHHHHHHH-HhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLK-QLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~-~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
..+||+|||||++|+++|+.|+ + .|++|+|||+.+..+|........ ... .+ .... .+.......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~------~G~~v~viE~~~~~GGtw~~~~yp--g~~---~d-~~s~--~~~~~~~~~ 72 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHE------LGLTTVGFDKADGPGGTWYWNRYP--GAL---SD-TESH--LYRFSFDRD 72 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHT------TCCCEEEEESSSSSCTHHHHCCCT--TCE---EE-EEGG--GSSCCSCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHc------CCCCEEEEECCCCCCCcccccCCC--Cce---ec-CCcc--eeeeccccc
Confidence 4579999999999999999999 7 899999999998877643211000 000 00 0000 000000000
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCc--EEecCCccceeEEcCCCcEEEE-------Ee
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGV--EIYPGIPASEVLYHGDGSVKGI-------AT 170 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~i~~~~~v~~i~~~~~g~~~~v-------~~ 170 (182)
.... . . ......++.++.+++.+.+++.++ .++++++|+++..++++..+.| ..
T Consensus 73 ----~~~~--~--~---------~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ 135 (540)
T 3gwf_A 73 ----LLQE--S--T---------WKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYR 135 (540)
T ss_dssp ----HHHH--C--C---------CSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred ----cccC--C--C---------CcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEE
Confidence 0000 0 0 013356778899999999999888 8999999999987665333322 34
Q ss_pred CCEEEecCCC
Q psy2240 171 GDVGIAKDGS 180 (182)
Q Consensus 171 ~~~vi~adG~ 180 (182)
.+.||.|+|.
T Consensus 136 ad~lV~AtG~ 145 (540)
T 3gwf_A 136 AKYVVNAVGL 145 (540)
T ss_dssp EEEEEECCCS
T ss_pred eCEEEECCcc
Confidence 5677778873
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.38 E-value=4.3e-12 Score=97.00 Aligned_cols=130 Identities=18% Similarity=0.185 Sum_probs=78.6
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
+..+||+|||||++|+++|+.|++ .|++|+|||+.+..||....... +... ++ .....+...+.+.
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~------~G~~v~iiE~~~~~GG~w~~~~~--pg~~---~d---~~~~~~~~~f~~~ 79 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRE------LGRSVHVIETAGDVGGVWYWNRY--PGAR---CD---IESIEYCYSFSEE 79 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTHHHHCCC--TTCB---CS---SCTTTSSCCSCHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHh------CCCCEEEEeCCCCCCCcccccCC--Ccee---ec---ccccccccccChh
Confidence 346899999999999999999999 89999999999888764321100 0000 00 0000000000010
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcC--cEEecCCccceeEEcCCCcEEE-------EEe
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMG--VEIYPGIPASEVLYHGDGSVKG-------IAT 170 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g--v~i~~~~~v~~i~~~~~g~~~~-------v~~ 170 (182)
. . .. +.. .....++.++.++|.+.+++.+ ..++++++|+++..++++.... ...
T Consensus 80 ~---~-~~--~~~-----------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ 142 (542)
T 1w4x_A 80 V---L-QE--WNW-----------TERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIR 142 (542)
T ss_dssp H---H-HH--CCC-----------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEE
T ss_pred h---h-hc--cCc-----------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEE
Confidence 0 0 00 000 0223456788888888887765 6799999999998765432222 234
Q ss_pred CCEEEecCCC
Q psy2240 171 GDVGIAKDGS 180 (182)
Q Consensus 171 ~~~vi~adG~ 180 (182)
.+.||.|+|.
T Consensus 143 ad~vV~AtG~ 152 (542)
T 1w4x_A 143 ARYLIMASGQ 152 (542)
T ss_dssp EEEEEECCCS
T ss_pred eCEEEECcCC
Confidence 5778888884
No 92
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.36 E-value=2.6e-12 Score=91.62 Aligned_cols=36 Identities=42% Similarity=0.600 Sum_probs=33.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|||+||||||+|+++|+.|++ .|++|+|||+...
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~------~g~~v~liE~~~~ 38 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGR------SSLKPVMYEGFMA 38 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCCEEECCSSG
T ss_pred CCCcEEEECCCHHHHHHHHHHHH------CCCCEEEEecCCC
Confidence 35899999999999999999999 8999999999753
No 93
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.35 E-value=8.7e-12 Score=90.06 Aligned_cols=42 Identities=33% Similarity=0.529 Sum_probs=34.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
.||+|||||++|+++|+.|++. ..+|++|+||||.+..+|..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~---~~~G~~V~v~Ek~~~~gg~~ 43 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQ---TSGPLYLAVWDKADDSGGRM 43 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSC---C-CCEEEEEECSSSSSCGGG
T ss_pred CcEEEECCcHHHHHHHHHHHhh---ccCCceEEEEECCCCCccce
Confidence 5899999999999999999871 01489999999998877654
No 94
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.34 E-value=1.1e-11 Score=89.18 Aligned_cols=107 Identities=21% Similarity=0.286 Sum_probs=69.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
+..+||+|||||++|+++|+.|++ .|++|+|||+. ..+|...... .
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~-~~gg~~~~~~-----------------------~---- 57 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR------AQLAPLVFEGT-SFGGALMTTT-----------------------D---- 57 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH------TTCCCEEECCS-SCSCGGGSCS-----------------------C----
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh------CCCeEEEEecC-CCCCceeccc-----------------------h----
Confidence 456899999999999999999999 89999999975 3443211000 0
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE-E-----EEeCCE
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK-G-----IATGDV 173 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~-~-----v~~~~~ 173 (182)
....+. + ...+.+..+...+.+.+++.++++++++ |+++.. .+.+.+ . ....+.
T Consensus 58 ------------~~~~~~---~---~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~ 117 (335)
T 2a87_A 58 ------------VENYPG---F---RNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARA 117 (335)
T ss_dssp ------------BCCSTT---C---TTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEE
T ss_pred ------------hhhcCC---C---CCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCE
Confidence 000000 0 1124556788888888888899999986 888765 333222 1 233456
Q ss_pred EEecCCC
Q psy2240 174 GIAKDGS 180 (182)
Q Consensus 174 vi~adG~ 180 (182)
+|.|+|.
T Consensus 118 lviAtG~ 124 (335)
T 2a87_A 118 VILAMGA 124 (335)
T ss_dssp EEECCCE
T ss_pred EEECCCC
Confidence 6666664
No 95
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.34 E-value=1.7e-11 Score=86.57 Aligned_cols=103 Identities=18% Similarity=0.143 Sum_probs=66.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
.+||+|||||++|+++|+.|++ .|++|+|||+.+..+... .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~~~~~~~~-------------------~-------------- 42 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR------ARKNILLVDAGERRNRFA-------------------S-------------- 42 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCCCGGGGC-------------------S--------------
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCCEEEEeCCCcccccc-------------------h--------------
Confidence 3799999999999999999999 899999999875322100 0
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHc-CcEEecCCccceeEEcCCCcEEE-----EEeCCEEE
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAM-GVEIYPGIPASEVLYHGDGSVKG-----IATGDVGI 175 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi 175 (182)
....+ +. ....++..+...+.+.+++. +++++. .+|+++..+++++.+. ....+.+|
T Consensus 43 ------~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vv 105 (297)
T 3fbs_A 43 ------HSHGF------LG----QDGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLI 105 (297)
T ss_dssp ------CCCSS------TT----CTTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEE
T ss_pred ------hhcCC------cC----CCCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEE
Confidence 00000 00 11344567888888888876 677765 5899997754433221 12335566
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 106 iAtG~ 110 (297)
T 3fbs_A 106 LAMGV 110 (297)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 66654
No 96
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.34 E-value=1.1e-11 Score=88.61 Aligned_cols=107 Identities=22% Similarity=0.269 Sum_probs=69.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+. .++|.... ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~lie~~-~~gg~~~~------------------~~----------- 47 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR------ANLQPVLITGM-EKGGQLTT------------------TT----------- 47 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT------TTCCCEEECCS-STTGGGGG------------------CS-----------
T ss_pred CcCCEEEECcCHHHHHHHHHHHH------CCCcEEEEccC-CCCceEec------------------ch-----------
Confidence 45799999999999999999999 89999999975 34432110 00
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCCEEEe
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGDVGIA 176 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~~vi~ 176 (182)
. ....+.+ ...+.+..+.+.+.+.+++.+++++.++ |+.+..+.+.+.+. ....+.+|.
T Consensus 48 -------~---~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v~~~~~~~~~~~lv~ 110 (320)
T 1trb_A 48 -------E---VENWPGD------PNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRLNGDNGEYTCDALII 110 (320)
T ss_dssp -------B---CCCSTTC------CSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEEEESSCEEEEEEEEE
T ss_pred -------h---hhhCCCC------CCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEEEeCCCEEEcCEEEE
Confidence 0 0000000 1123456788888888888999999986 88887543333220 223456666
Q ss_pred cCCC
Q psy2240 177 KDGS 180 (182)
Q Consensus 177 adG~ 180 (182)
|.|.
T Consensus 111 AtG~ 114 (320)
T 1trb_A 111 ATGA 114 (320)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 6664
No 97
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.34 E-value=3.5e-13 Score=100.30 Aligned_cols=138 Identities=14% Similarity=0.035 Sum_probs=73.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC---CccccccccChhHHhhhhhhHHhcCCCCCccch
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG---GHILSGAVIDPIALNELLPDWKDLGAPLNTPVH 97 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (182)
+..||+|||||++|+++|+.|++ +|++|+|||+.+... +...+........+.. ....+......
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~------~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~----~~~lg~~~~~~-- 88 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQ------HDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQR----EVALDVNEWPS-- 88 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHH------TTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHH----HHHTTCCCSCH--
T ss_pred CCCCEEEECCcHHHHHHHHHHHH------CCCeEEEEcCCChHhhcccccccchhccchhhhh----hhhcChhhhhh--
Confidence 34799999999999999999999 899999999986321 2111222222222211 11111110000
Q ss_pred hhhHHHHHhhccCCCCC--CCCC-CCCCCCccccchHHHHHHHHHHHHHcCcEEecCC-ccceeEEcCCCcEEEEEeCCE
Q psy2240 98 EDKFAYLTKSKRIGIPI--LPGM-PMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGI-PASEVLYHGDGSVKGIATGDV 173 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~-~v~~i~~~~~g~~~~v~~~~~ 173 (182)
....+ ......... ...+ .......+.+++..+...|.+.+++.|+++++.. .+.++..... ..++
T Consensus 89 --~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~~~~~-------~ad~ 158 (430)
T 3ihm_A 89 --EEFGY-FGHYYYVGGPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLEGLSE-------QYDL 158 (430)
T ss_dssp --HHHCE-EEEEEEECSSSCEEEEEEEEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHHHHHT-------TSSE
T ss_pred --hcccc-cceeEEECCCCccccchhcCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhhhhcc-------cCCE
Confidence 00000 000000000 0000 0001124677888999999999999999998743 3355432111 3578
Q ss_pred EEecCCC
Q psy2240 174 GIAKDGS 180 (182)
Q Consensus 174 vi~adG~ 180 (182)
||+|+|.
T Consensus 159 VV~AdG~ 165 (430)
T 3ihm_A 159 LVVCTGK 165 (430)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 8888886
No 98
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.34 E-value=1.2e-11 Score=91.64 Aligned_cols=39 Identities=31% Similarity=0.544 Sum_probs=36.1
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
||+|||||++||++|+.|++ +|.+|+||||.+..||...
T Consensus 2 dVvVIGaGiaGLsaA~~La~------~G~~V~vlE~~~~~GG~~~ 40 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLAR------NGHEIIVLEKSAMIGGRFT 40 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTTSS
T ss_pred cEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCCCceeE
Confidence 89999999999999999999 8999999999998887653
No 99
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.33 E-value=1.6e-11 Score=87.50 Aligned_cols=38 Identities=39% Similarity=0.691 Sum_probs=34.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGG 65 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g 65 (182)
.+|||+||||||+|+++|+.|++ .|++|+|||+.. ++|
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~------~g~~V~liE~~~-~gG 42 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASR------ANLKTVMIERGI-PGG 42 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEecCC-CCC
Confidence 46999999999999999999999 899999999864 444
No 100
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.32 E-value=1.3e-11 Score=87.82 Aligned_cols=87 Identities=29% Similarity=0.385 Sum_probs=61.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEE-EecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCL-VEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~v-lE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
..+||+|||||++|+++|+.|++ .|++|+| +|| +..+|......
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~v~li~e~-~~~gG~~~~~~---------------------------- 47 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR------GGLKNVVMFEK-GMPGGQITSSS---------------------------- 47 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH------HTCSCEEEECS-SSTTGGGGGCS----------------------------
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCCeEEEEeC-CCCCceeeeec----------------------------
Confidence 34799999999999999999999 7999999 999 44554321100
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcC
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG 161 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~ 161 (182)
....++. . ...+.+..+...+.+.+++.+++++.+ +|+++ .++
T Consensus 48 -----------~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~ 90 (315)
T 3r9u_A 48 -----------EIENYPG---V---AQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKN 90 (315)
T ss_dssp -----------CBCCSTT---C---CSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EEC
T ss_pred -----------eeccCCC---C---CCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecC
Confidence 0000000 0 123455688889999999899999988 88888 544
No 101
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.32 E-value=1.5e-12 Score=97.73 Aligned_cols=119 Identities=24% Similarity=0.241 Sum_probs=67.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCC-----ceEEEEecCCCCCCccc---cccccChhHHhhhhhhHHhcCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKE-----LKVCLVEKAAEVGGHIL---SGAVIDPIALNELLPDWKDLGAPL 92 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-----~~v~vlE~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 92 (182)
..+||+|||||++|+++|+.|++ .| .+|+|||+.+..+.... .+..+....+ .++. ..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~------~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~----~~l~----~~ 94 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQE------RAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFL----KDLV----SL 94 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHH------HHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTT----SSSS----TT
T ss_pred CcCCEEEECCCHHHHHHHHHHHh------cccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchh----hccc----cc
Confidence 35799999999999999999999 67 89999999987652110 0000100000 0000 00
Q ss_pred Cccchhh-hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEc
Q psy2240 93 NTPVHED-KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYH 160 (182)
Q Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~ 160 (182)
..+.... ...++...... ..+ .........+..+.+++...+++.++.++++++|+++..+
T Consensus 95 ~~p~~~~~~~~~l~~~~~~-~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~ 156 (463)
T 3s5w_A 95 RNPTSPYSFVNYLHKHDRL-VDF------INLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPM 156 (463)
T ss_dssp TCTTCTTSHHHHHHHTTCH-HHH------HHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEE
T ss_pred cCCCCCCChhHhhhhcCce-eec------ccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEe
Confidence 0010011 11111111100 000 0000223456788889988888889999999999999764
No 102
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.31 E-value=2.5e-12 Score=96.56 Aligned_cols=138 Identities=17% Similarity=0.166 Sum_probs=76.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCce---EEEEecCCCCCCccccccc--cChhHHhhhhhhHHhcCCCCCccch
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELK---VCLVEKAAEVGGHILSGAV--IDPIALNELLPDWKDLGAPLNTPVH 97 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~---v~vlE~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (182)
.||+|||||++|+++|..|++.. + .|++ |+|||+.+..||.+..... ..+.........+... .....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~-~--~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l----~~~~~ 75 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQ-E--KGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYL----WSNGP 75 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH-H--TTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTC----BCSSC
T ss_pred CcEEEECccHHHHHHHHHHHhhh-h--cCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccch----hhcCC
Confidence 58999999999999999998721 0 3788 9999999888765432110 0000000000000000 00000
Q ss_pred hhhHHHHHhhccCCCCCCCCCCCC----CCCccccchHHHHHHHHHHHHHcCcE--EecCCccceeEEcCCC--cEEE--
Q psy2240 98 EDKFAYLTKSKRIGIPILPGMPMN----NHGNYVVRLGHVVKWLGEQAEAMGVE--IYPGIPASEVLYHGDG--SVKG-- 167 (182)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~gv~--i~~~~~v~~i~~~~~g--~~~~-- 167 (182)
... .. +.+++.. ......+++..+.++|.+.+++.|++ ++++++|+++..++++ +.+.
T Consensus 76 ~~~---------~~---~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~ 143 (464)
T 2xve_A 76 KEC---------LE---FADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQ 143 (464)
T ss_dssp GGG---------TC---BTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEE
T ss_pred hhh---------cc---cCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEE
Confidence 000 00 0000000 00123456778999999999888987 9999999999875442 2221
Q ss_pred --------EEeCCEEEecCC
Q psy2240 168 --------IATGDVGIAKDG 179 (182)
Q Consensus 168 --------v~~~~~vi~adG 179 (182)
....+.||.|.|
T Consensus 144 ~~~~g~~~~~~~d~VVvAtG 163 (464)
T 2xve_A 144 DHTTDTIYSEEFDYVVCCTG 163 (464)
T ss_dssp ETTTTEEEEEEESEEEECCC
T ss_pred EcCCCceEEEEcCEEEECCC
Confidence 223466777777
No 103
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.28 E-value=1.6e-11 Score=92.85 Aligned_cols=51 Identities=33% Similarity=0.533 Sum_probs=40.6
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPI 76 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~ 76 (182)
++++||+|||||++|+++|+.|++ .|.+|+|||+.+..||.....+++...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~GG~~~~~gciP~k 73 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQ------LGMKVAVVEKRSTYGGTCLNVGCIPSK 73 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCCCCccccccchhhH
Confidence 456899999999999999999999 899999999988888765544444333
No 104
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.27 E-value=4.8e-12 Score=95.12 Aligned_cols=48 Identities=31% Similarity=0.531 Sum_probs=40.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVID 74 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~ 74 (182)
..+||+|||||++|+++|+.|++ .|++|+||||.+..||.....+++.
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~------~G~~V~liEk~~~~GG~~~~~gciP 50 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAK------AKYNVLMADPKGELGGNCLYSGCVP 50 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECTTSSSSHHHHHHSHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHh------CCCeEEEEECCCCCCCcccccCCCc
Confidence 46899999999999999999999 8999999998888887655444443
No 105
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.26 E-value=4.6e-11 Score=90.16 Aligned_cols=49 Identities=39% Similarity=0.624 Sum_probs=40.3
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
|+..+||+|||||++|+++|+.|++ .|.+|+|||+.+..+|...+.+++
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~ 51 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAAD------EGLKVAIVERYKTLGGVCLNVGCI 51 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSCSSHHHHHHSHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCCCCceeeeccc
Confidence 3456899999999999999999999 899999999987777654433343
No 106
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.26 E-value=1.6e-11 Score=92.99 Aligned_cols=127 Identities=22% Similarity=0.358 Sum_probs=69.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhh--------hcCCCceEEEEecCCCCC---CccccccccChhHHhhhhhhHHhc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAE--------KDGKELKVCLVEKAAEVG---GHILSGAVIDPIALNELLPDWKDL 88 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~--------~~~~g~~v~vlE~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~ 88 (182)
+.-+||||||+||+||++|++|.+... ....+..++.+||.+..+ +....+..+....+ .++..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl----~Dlvt- 111 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFI----KDLAT- 111 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGG----GSSST-
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccch----hhhcc-
Confidence 445899999999999999999987311 011234677888876543 11111111111111 11100
Q ss_pred CCCCCccchhhhH-HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcC
Q psy2240 89 GAPLNTPVHEDKF-AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG 161 (182)
Q Consensus 89 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~ 161 (182)
+.++-....+ .++.....+ . ++.......+.+.++.++|...+++.+..|+++++|++++.++
T Consensus 112 ---l~~P~s~~sf~~yl~~~~rl-~------~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~ 175 (501)
T 4b63_A 112 ---LRDPRSSFTFLNYLHQKGRL-I------HFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGK 175 (501)
T ss_dssp ---TTCTTCTTSHHHHHHHHTCH-H------HHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEEC
T ss_pred ---ccCCCCccchHHHHHHhCCc-c------CCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeecccc
Confidence 1111111111 111111110 0 0011114456788999999999998888899999999997644
No 107
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.26 E-value=4.3e-12 Score=96.26 Aligned_cols=48 Identities=31% Similarity=0.513 Sum_probs=40.0
Q ss_pred cccccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 16 ~~~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
|+..++++||+|||||++||++|+.|++. .|.+|+|||+++.+||...
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~-----~G~~V~VlE~~~~~GG~~~ 51 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQI-----DGPSWMIVDSNETPGGLAS 51 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHH-----CCSCEEEEESSSSCCGGGC
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhh-----CCCCEEEEECCCCCcCCee
Confidence 33445678999999999999999999872 4899999999999998653
No 108
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.25 E-value=3.3e-11 Score=91.70 Aligned_cols=37 Identities=32% Similarity=0.423 Sum_probs=33.6
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
++..+||+|||||++|+++|+.|++ .|.+|+|||+.+
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~------~G~~V~liEk~~ 65 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQ------YGKKVMVLDFVT 65 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCCC
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeccC
Confidence 3456899999999999999999999 899999999964
No 109
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.25 E-value=1.7e-11 Score=92.34 Aligned_cols=51 Identities=41% Similarity=0.619 Sum_probs=41.5
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChh
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPI 76 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~ 76 (182)
+..+||+|||||++|+++|+.|++ .|++|+|||+.+..+|.....+++...
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~~~g~~psk 53 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQ------LGFNTACVEKRGKLGGTCLNVGCIPSK 53 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCcCCccceeccHHHH
Confidence 446899999999999999999999 899999999987777655444444333
No 110
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.24 E-value=1.1e-10 Score=83.01 Aligned_cols=84 Identities=29% Similarity=0.357 Sum_probs=59.6
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
++||+|||||++|+++|+.|++ .|++|+|||+. .+|..... .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~------~g~~v~li~~~--~gG~~~~~-----------------~------------- 42 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR------KGIRTGLMGER--FGGQILDT-----------------V------------- 42 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT------TTCCEEEECSS--TTGGGGGC-----------------C-------------
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCcEEEEeCC--CCceeccc-----------------c-------------
Confidence 3799999999999999999999 89999999863 34322100 0
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEE
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLY 159 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~ 159 (182)
..+.+ .. ....++..+.+.+.+.+++.+++++.+++|+.+..
T Consensus 43 ---------~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~ 84 (310)
T 1fl2_A 43 ---------DIENY---IS----VPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIP 84 (310)
T ss_dssp ---------EECCB---TT----BSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEEC
T ss_pred ---------ccccc---cC----cCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEe
Confidence 00000 00 11234567888888888888999999999999865
No 111
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.21 E-value=1e-10 Score=88.31 Aligned_cols=46 Identities=22% Similarity=0.348 Sum_probs=37.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
..+||+|||||++|+++|+.|++ .|.+|+|||+ ...||.....+++
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~------~G~~V~liEk-~~~GG~~~~~gci 70 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGA------LGKRVAIAEE-YRIGGTCVIRGCV 70 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH------TTCCEEEEES-SCTTHHHHHHSHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHh------CcCEEEEEeC-CCCCCceeccCcc
Confidence 36899999999999999999999 8999999999 4566654433443
No 112
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.21 E-value=9e-11 Score=88.27 Aligned_cols=48 Identities=44% Similarity=0.675 Sum_probs=40.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVID 74 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~ 74 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..+|.....+++.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~------~g~~V~liE~~~~~GG~~~~~g~~p 52 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQ------LGFKTTCIEKRGALGGTCLNVGCIP 52 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSSSCCSHHHHSHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCccccccCcCccc
Confidence 45799999999999999999999 7999999999988887654444443
No 113
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.19 E-value=1.7e-11 Score=88.06 Aligned_cols=48 Identities=38% Similarity=0.670 Sum_probs=39.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAV 72 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~ 72 (182)
.++||+||||||+|+++|+.|++. ..|++|+||||.+.+||....++.
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~----r~G~~V~viEk~~~~GG~~~~~~~ 111 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKN----RPDLKVCIIESSVAPGGGSWLGGQ 111 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHH----CTTSCEEEECSSSSCCTTTTCCST
T ss_pred cCCCEEEECCCHHHHHHHHHHHHh----CCCCeEEEEECCCCCCceEEeCCc
Confidence 357999999999999999999751 159999999999988887654443
No 114
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.19 E-value=6.1e-11 Score=89.15 Aligned_cols=46 Identities=41% Similarity=0.662 Sum_probs=39.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
++||+|||||++|+++|+.|++ .|.+|+|||+.+..||.....+++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~~~~GG~~~~~g~~ 47 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ------LGMKTACVEKRGALGGTCLNVGCI 47 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSHH
T ss_pred CCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCcCCcCCCcCcH
Confidence 4799999999999999999999 899999999998787755443443
No 115
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.19 E-value=1.4e-10 Score=87.63 Aligned_cols=35 Identities=29% Similarity=0.508 Sum_probs=32.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
..++||+|||||++|+++|+.|++ .|.+|+||||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~------~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQ------LGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh------CCCeEEEEEec
Confidence 346899999999999999999999 89999999983
No 116
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.19 E-value=2.3e-10 Score=87.13 Aligned_cols=44 Identities=23% Similarity=0.320 Sum_probs=38.3
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
++..+||+|||||++|+++|+.|++ .|.+|+|||+.+..||...
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~------~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRA------MGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCccc
Confidence 3456899999999999999999999 8999999999986776543
No 117
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.18 E-value=4.4e-11 Score=89.85 Aligned_cols=39 Identities=44% Similarity=0.602 Sum_probs=34.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
.+||+|||||++|+++|+.|++ .|++|+|||+. ..+|..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~------~G~~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ------LGLSTAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCC-CCCCcc
Confidence 5799999999999999999999 89999999998 455443
No 118
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.18 E-value=1.8e-10 Score=86.78 Aligned_cols=48 Identities=25% Similarity=0.469 Sum_probs=38.7
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
++..+||+|||||++|+++|+.|++ .|.+|+|||+. ..||.....+++
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~------~G~~V~liE~~-~~GG~~~~~gc~ 64 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAE------LGARAAVVESH-KLGGTCVNVGCV 64 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-CTTHHHHHHSHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEecC-CCCCcccccCcc
Confidence 3456899999999999999999999 89999999987 456554433443
No 119
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.18 E-value=5e-11 Score=89.87 Aligned_cols=47 Identities=30% Similarity=0.482 Sum_probs=37.9
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
+.++||+|||||++|+++|+.|++ .|.+|+|||+. ..+|...+.+++
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~------~g~~V~liE~~-~~GG~~~n~gci 55 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAAS------YGAKTLLVEAK-ALGGTCVNVGCV 55 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH------TSCCEEEEESS-CTTHHHHHHSHH
T ss_pred cccCCEEEEcCCHHHHHHHHHHHH------CCCcEEEEeCC-CcCCcCcccCcH
Confidence 456899999999999999999999 89999999997 456544433443
No 120
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.18 E-value=1.1e-10 Score=87.95 Aligned_cols=41 Identities=39% Similarity=0.600 Sum_probs=36.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
.++||+|||||++|+++|+.|++ .|++|+|||+.+..+|..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~------~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ------LGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH------HTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHh------CCCEEEEEeCCCccCCCC
Confidence 46899999999999999999999 799999999998666554
No 121
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.17 E-value=1.2e-10 Score=88.25 Aligned_cols=46 Identities=30% Similarity=0.587 Sum_probs=37.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCC---CceEEEEecCCCCCCccccccccC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGK---ELKVCLVEKAAEVGGHILSGAVID 74 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~---g~~v~vlE~~~~~~g~~~~~~~~~ 74 (182)
.+||+|||||++|+++|+.|++ . |.+|+|||+.+ .||.....++++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~------~~~~G~~V~liE~~~-~GG~~~~~g~~p 50 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAAT------SHPETTQVTVIDCDG-IGGAAVLDDCVP 50 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------HCTTTEEEEEEESSC-TTHHHHHTSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCCcCEEEEEeCCC-cCCcccCcCccc
Confidence 4799999999999999999999 6 89999999987 666544334433
No 122
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=99.17 E-value=3.1e-10 Score=87.18 Aligned_cols=37 Identities=30% Similarity=0.567 Sum_probs=33.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..+||+||||||.+||.+|..|++- .+.+|+|||+.+
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~-----~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTEN-----PNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTS-----TTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhC-----CCCcEEEEecCC
Confidence 4579999999999999999999961 478999999987
No 123
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.17 E-value=4.6e-10 Score=85.47 Aligned_cols=85 Identities=27% Similarity=0.364 Sum_probs=60.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDK 100 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (182)
..+||+|||||++|+++|+.|++ .|++|+|+|+. .+|..... ..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~------~G~~v~lie~~--~GG~~~~~-----------------~~----------- 254 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSAR------KGIRTGLMGER--FGGQVLDT-----------------VD----------- 254 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSS--TTGGGTTC-----------------SC-----------
T ss_pred CcccEEEECCcHHHHHHHHHHHh------CCCeEEEEECC--CCCccccc-----------------cc-----------
Confidence 46899999999999999999999 89999999863 34321100 00
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEE
Q psy2240 101 FAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLY 159 (182)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~ 159 (182)
.+.+.. ....++..+...+.+.+++.|++++.+++|+++..
T Consensus 255 -----------~~~~~~-------~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~ 295 (521)
T 1hyu_A 255 -----------IENYIS-------VPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVP 295 (521)
T ss_dssp -----------BCCBTT-------BSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEEC
T ss_pred -----------ccccCC-------CCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEe
Confidence 000000 01134567888888889889999999999999864
No 124
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.17 E-value=3.6e-11 Score=90.03 Aligned_cols=45 Identities=22% Similarity=0.284 Sum_probs=40.8
Q ss_pred cccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 18 ~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
.|+.++||+|||+|++||++|+.|++ +|.+|+|||+++..||...
T Consensus 7 ~~~~~~dvvVIGaG~~GL~aA~~La~------~G~~V~vlE~~~~~GG~~~ 51 (453)
T 2bcg_G 7 TIDTDYDVIVLGTGITECILSGLLSV------DGKKVLHIDKQDHYGGEAA 51 (453)
T ss_dssp CCCCBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGGGC
T ss_pred hccccCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCCCCCcccc
Confidence 45567899999999999999999999 8999999999999998764
No 125
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.17 E-value=1.5e-10 Score=87.23 Aligned_cols=49 Identities=37% Similarity=0.542 Sum_probs=40.6
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVID 74 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~ 74 (182)
+..+||+|||||++|+++|+.|++ .|.+|+|||+.+..||.....++++
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~~~GG~~~~~g~~P 52 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQ------LGFKTVCIEKNETLGGTCLNVGCIP 52 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSSSHHHHHHSHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCcCCcccccCccc
Confidence 345899999999999999999999 8999999999988877654444433
No 126
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.16 E-value=2e-10 Score=86.21 Aligned_cols=45 Identities=22% Similarity=0.389 Sum_probs=37.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
.+||+|||||++|+++|+.|++ .|++|+|||+ ...||.....+++
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~------~G~~V~liEk-~~~GG~~~~~gci 49 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAA------LGKKVAIAEE-FRYGGTCVIRGCV 49 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT------TTCCEEEEES-SCTTHHHHHHSHH
T ss_pred CCcEEEECcCHHHHHHHHHHHh------CCCEEEEEeC-CCCCCcccccCch
Confidence 5899999999999999999999 8999999999 5566654443443
No 127
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.12 E-value=7.5e-11 Score=89.90 Aligned_cols=53 Identities=26% Similarity=0.447 Sum_probs=41.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC--------CCCccccccccChhHHh
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE--------VGGHILSGAVIDPIALN 79 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~--------~~g~~~~~~~~~~~~~~ 79 (182)
.+||++|||+|++|.++|..+++ .|.+|+|||+... .||...+-++++++.+.
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~------~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~ 101 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAA------HGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMH 101 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHT------TTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHH------CCCeEEEEeccccccccccCCCCCcccccchHHHHHHH
Confidence 36899999999999999999999 8999999998653 45444455666665553
No 128
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.11 E-value=1.4e-10 Score=86.81 Aligned_cols=38 Identities=34% Similarity=0.552 Sum_probs=33.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
.||+|||||++|+++|+.|++. ++|.+|+|||+.+..+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKK----YPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCc
Confidence 4899999999999999999982 1389999999998654
No 129
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.11 E-value=1.3e-10 Score=89.67 Aligned_cols=41 Identities=29% Similarity=0.507 Sum_probs=34.3
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
+...||+|||||++|+++|+.|++. +.|.+|+|||+.+..+
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~----~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRL----SEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHH----CSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhh----CcCCCEEEEECCCCcc
Confidence 3456899999999999999999982 1389999999987653
No 130
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.11 E-value=4.4e-10 Score=84.40 Aligned_cols=45 Identities=44% Similarity=0.635 Sum_probs=37.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
.+||+|||||++|+++|..|++ .|.+|+|||+.+ .||.....+++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~------~g~~V~lie~~~-~GG~~~~~g~i 50 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQ------LGLKVLAVEAGE-VGGVCLNVGCI 50 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSC-TTHHHHHTSHH
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCC-CCCCCCCcChH
Confidence 5899999999999999999999 899999999987 56544333333
No 131
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.11 E-value=7e-11 Score=87.10 Aligned_cols=43 Identities=26% Similarity=0.512 Sum_probs=38.4
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCC-CceEEEEecCCCCCCcc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGK-ELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~-g~~v~vlE~~~~~~g~~ 67 (182)
|...+||+|||||++|+++|+.|++ . |.+|+|||+++..||..
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~------~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVAT------QLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHH------HSCCCEEEECSSSSSSGGG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHH------hCCCCEEEEeCCCCCCCee
Confidence 4446899999999999999999999 6 89999999999888765
No 132
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.10 E-value=8.8e-10 Score=82.66 Aligned_cols=41 Identities=41% Similarity=0.658 Sum_probs=35.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
..+||+|||||++|+++|..|++ .|.+|+|||+ ...||...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ------LGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH------HTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCEEEEEcc-CCCCCcCC
Confidence 45799999999999999999999 7899999999 55666543
No 133
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=99.09 E-value=4.8e-10 Score=86.11 Aligned_cols=37 Identities=41% Similarity=0.530 Sum_probs=33.3
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAAE 62 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~~ 62 (182)
..+||+||||||.+||.+|..|++ .+ .+|+|||+.+.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse------~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAE------NPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTT------STTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHh------CCCCcEEEEecCCC
Confidence 356999999999999999999998 66 79999999875
No 134
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.09 E-value=9.9e-10 Score=82.30 Aligned_cols=45 Identities=42% Similarity=0.642 Sum_probs=36.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
++||+|||||++|+++|..|++ .|.+|+|||+. ..+|.....+++
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~-~~gG~~~~~g~~ 47 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ------LGQKVTIVEKG-NLGGVCLNVGCI 47 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-CTTHHHHHTSHH
T ss_pred cCCEEEECCCHHHHHHHHHHHh------CCCeEEEEECC-CCCCcCcCcCch
Confidence 4799999999999999999999 89999999998 556544333333
No 135
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.08 E-value=1.3e-09 Score=82.57 Aligned_cols=45 Identities=42% Similarity=0.716 Sum_probs=36.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
++||+|||||++|+++|+.|++ .|.+|+|||+.+ .||.....+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~------~g~~V~liE~~~-~GG~c~~~gc~ 46 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR------HNAKVALVEKSR-LGGTCVNVGCV 46 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSS-TTHHHHHTSHH
T ss_pred ccCEEEECCCHHHHHHHHHHHH------CCCcEEEEeCCC-cCccccccCCc
Confidence 4799999999999999999999 899999999984 55544333333
No 136
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.06 E-value=1.9e-09 Score=81.33 Aligned_cols=35 Identities=26% Similarity=0.424 Sum_probs=31.9
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
+..+||+|||||++|+++|+.|++ .|.+|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~------~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVL------NGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH------CCCEEEEEEec
Confidence 356899999999999999999999 89999999953
No 137
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.06 E-value=1.1e-09 Score=82.30 Aligned_cols=48 Identities=29% Similarity=0.538 Sum_probs=39.2
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVID 74 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~ 74 (182)
+..+||+|||||++|+++|+.|++ .|.+|+|||+. ..||.....++++
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~------~g~~V~lie~~-~~GG~~~~~g~ip 49 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVE------QGAQVTLIERG-TIGGTCVNVGCVP 49 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESS-STTHHHHHHSHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH------CCCEEEEEeCC-CCCccccCCCccc
Confidence 346899999999999999999999 89999999998 5676554444443
No 138
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.05 E-value=1.7e-10 Score=85.72 Aligned_cols=40 Identities=38% Similarity=0.592 Sum_probs=36.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
+||+|||||++|+++|+.|++ .|.+|+|||+++..||...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~------~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTN------AGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHH------TTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHH------cCCeEEEEecCCCccCeec
Confidence 699999999999999999999 8999999999888887653
No 139
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.05 E-value=1.1e-10 Score=88.28 Aligned_cols=40 Identities=33% Similarity=0.566 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
.+|+|||||++||++|+.|++ +|++|+|||+++.+||...
T Consensus 2 k~VvVIGaG~~GL~aA~~La~------~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQA------AGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHH------TTCCEEEECCC-------C
T ss_pred CCEEEECCcHHHHHHHHHHHH------CCCcEEEEccCCCCCCcEE
Confidence 369999999999999999999 8999999999999988653
No 140
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.05 E-value=5.2e-10 Score=84.58 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCC---ceEEEEecCCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKE---LKVCLVEKAAEVG 64 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g---~~v~vlE~~~~~~ 64 (182)
+.+||+|||||++|+++|..|++ .| .+|+|||+.+..+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~------~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLT------NYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------HHGGGSEEEEECSSSCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHh------cCCCCCeEEEEECCCCCC
Confidence 35899999999999999999998 56 8999999987543
No 141
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.03 E-value=2.6e-10 Score=86.75 Aligned_cols=41 Identities=46% Similarity=0.708 Sum_probs=37.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
..+||+|||||++|+++|+.|++ .|.+|+|||+++..||..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~------~G~~V~vlE~~~~~GGr~ 43 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHD------SGLNVVVLEARDRVGGRT 43 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHH------TTCCEEEECSSSSSBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCCEEEEeCCCCCCCce
Confidence 45799999999999999999999 899999999999888765
No 142
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.03 E-value=2.4e-10 Score=86.95 Aligned_cols=41 Identities=34% Similarity=0.554 Sum_probs=37.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~~~~g~~ 67 (182)
...||+|||||++||++|+.|++ .| .+|+|||+.+.+||..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~------~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQ------NGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHH------TTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHh------cCCCCEEEEeCCCCCCCce
Confidence 45799999999999999999999 89 9999999999999865
No 143
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=99.02 E-value=4.3e-09 Score=76.54 Aligned_cols=110 Identities=20% Similarity=0.179 Sum_probs=65.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccc---------ccChh----HHhhhhhhHHhcC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGA---------VIDPI----ALNELLPDWKDLG 89 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~---------~~~~~----~~~~~~~~~~~~~ 89 (182)
.||+|||||++|+.+|+.|++ .|.+|+|+|+.+.........+ .+... ..-.+....+..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~------~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLG 75 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR------LGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAG 75 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH------TTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHT
T ss_pred CCEEEECchHHHHHHHHHHHH------CCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcC
Confidence 589999999999999999999 8999999999874432211110 00000 0000011111110
Q ss_pred CCCCccchhhhHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHH-cCcEEecCCccceeE
Q psy2240 90 APLNTPVHEDKFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEA-MGVEIYPGIPASEVL 158 (182)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~gv~i~~~~~v~~i~ 158 (182)
..+......... + . .....++|..+.+.+.+.++. .+++++ +.+|++|.
T Consensus 76 ---------g~m~~~aD~~~i--p---A-----g~al~vDR~~f~~~~~~~le~~pni~l~-q~eV~~l~ 125 (443)
T 3g5s_A 76 ---------SLVMEAADLARV--P---A-----GGALAVDREEFSGYITERLTGHPLLEVV-REEVREIP 125 (443)
T ss_dssp ---------CHHHHHHHHSEE--C---C-----TTEEEECHHHHHHHHHHHHHTCTTEEEE-CSCCCSCC
T ss_pred ---------ChHhhhhhhcCC--C---C-----CccccCCcHHHHHHHHHHHHcCCCeEEE-hhhhhhhc
Confidence 111111111111 1 1 113469999999999999977 568887 56888884
No 144
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.02 E-value=4.3e-10 Score=83.43 Aligned_cols=42 Identities=33% Similarity=0.614 Sum_probs=37.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCCCCCCccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~~~~g~~~ 68 (182)
...||+|||||++|+++|+.|++ .| .+|+|+|+.+.+||...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~------~g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ------AGFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH------TTCCCEEEECSSSCSSTTCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHh------CCCCcEEEEECCCCCCCccc
Confidence 45799999999999999999999 89 89999999998887653
No 145
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.01 E-value=4.2e-10 Score=82.60 Aligned_cols=43 Identities=33% Similarity=0.491 Sum_probs=38.5
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
...+||+|||||++|+++|+.|++ .|.+|+|||+.+..||...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~------~g~~v~v~E~~~~~GG~~~ 69 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLAS------SGQRVLIVDRRPHIGGNAY 69 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSSGGGC
T ss_pred CCCCCEEEECccHHHHHHHHHHHH------CCCceEEEeccCCCCCccc
Confidence 356899999999999999999999 8999999999988887653
No 146
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.01 E-value=3.2e-10 Score=85.28 Aligned_cols=40 Identities=43% Similarity=0.692 Sum_probs=36.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCCCCCCccc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAAEVGGHIL 68 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~~~~g~~~ 68 (182)
.||+|||||++||++|+.|++ +|. +|+|||+++..||...
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~------~G~~~~V~vlEa~~~~GG~~~ 44 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSR------APCPPKVVLVESSERLGGWIR 44 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHT------SSSCCEEEEECSSSSSBTTCC
T ss_pred ceEEEECCcHHHHHHHHHHHh------CCCCCcEEEEeCCCCCCCceE
Confidence 589999999999999999999 898 9999999998887653
No 147
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.00 E-value=2.2e-10 Score=85.90 Aligned_cols=40 Identities=45% Similarity=0.749 Sum_probs=36.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCC------ceEEEEecCCCCCCcc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKE------LKVCLVEKAAEVGGHI 67 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g------~~v~vlE~~~~~~g~~ 67 (182)
.+||+|||||++||++|+.|++ .| .+|+|||+.+..||..
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~------~G~~~~~~~~V~vlEa~~~~GG~~ 50 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEK------EIKEKNLPLELTLVEASPRVGGKI 50 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH------HHTTTTCSEEEEEECSSSSSCTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHH------hccccCCCCCEEEEECCCCCCceE
Confidence 4799999999999999999999 67 9999999998888754
No 148
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.00 E-value=6.4e-10 Score=82.38 Aligned_cols=37 Identities=43% Similarity=0.697 Sum_probs=32.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCce--EEEEecCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELK--VCLVEKAAEV 63 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~--v~vlE~~~~~ 63 (182)
..+||+|||||++|+++|..|++ .|.+ |+|||+.+..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~------~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ------NGFEGRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCSCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHc------cCcCCCEEEEecCCCC
Confidence 45799999999999999999999 7776 9999998754
No 149
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.00 E-value=5.2e-10 Score=84.47 Aligned_cols=42 Identities=36% Similarity=0.718 Sum_probs=38.3
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
+...||+|||||++||++|+.|++ .|.+|+|||+.+..||..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~------~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQK------AGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH------CCCCEEEEeccCCCCCce
Confidence 346799999999999999999999 899999999999988864
No 150
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.99 E-value=6.3e-10 Score=83.72 Aligned_cols=38 Identities=32% Similarity=0.554 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..||+|||||++|+++|+.|++. ++|.+|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~----~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRL----DPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHH----CTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCcc
Confidence 35899999999999999999982 138999999998764
No 151
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.98 E-value=8.4e-10 Score=83.46 Aligned_cols=40 Identities=33% Similarity=0.578 Sum_probs=37.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
+||+|||||++|+++|+.|++ .|++|+|||+.+.+||...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~------~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTV------AGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHH------TTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHH------CCCCEEEEeCCCCCCCcce
Confidence 799999999999999999999 8999999999999888653
No 152
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.98 E-value=7.6e-10 Score=80.64 Aligned_cols=41 Identities=34% Similarity=0.519 Sum_probs=37.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC-CCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA-AEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~-~~~~g~~ 67 (182)
...||+|||||++|+++|+.|++ .|++|+|||+. +..||..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~------~G~~V~VlE~~~~~vGGr~ 84 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR------AGHDVTILEANANRVGGRI 84 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH------TSCEEEEECSCSSCCBTTC
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCcEEEEeccccccCCce
Confidence 45799999999999999999999 89999999999 7777754
No 153
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.97 E-value=1.4e-09 Score=82.23 Aligned_cols=39 Identities=51% Similarity=0.857 Sum_probs=35.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGH 66 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~ 66 (182)
..+||+|||||++|+++|+.|++ . .+|+|||+.+..+|.
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~------~-~~V~vie~~~~~GG~ 145 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQ------Y-LTVALIEERGWLGGD 145 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTT------T-CCEEEECTTSSSSCS
T ss_pred ccCCEEEECccHHHHHHHHHHHh------c-CCEEEEeCCCCCCCe
Confidence 45799999999999999999999 7 999999999877654
No 154
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.97 E-value=3.5e-09 Score=80.18 Aligned_cols=34 Identities=26% Similarity=0.510 Sum_probs=30.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEe
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVE 58 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE 58 (182)
...+||+|||||++|+++|+.|++. .|++|+|||
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~-----~G~~V~liE 38 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATL-----YGKRVAVVD 38 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHH-----HCCCEEEEE
T ss_pred ccccCEEEECCChhHHHHHHHHHHh-----cCCeEEEEe
Confidence 3468999999999999999999872 378999999
No 155
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.96 E-value=8.2e-10 Score=82.60 Aligned_cols=39 Identities=46% Similarity=0.650 Sum_probs=33.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
..||+|||||++|+++|+.|++. +.|.+|+|||+.+..+
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~----~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRL----KPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHh----CcCCCEEEEECCCccc
Confidence 46899999999999999999982 2378999999987543
No 156
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.96 E-value=7.8e-10 Score=82.82 Aligned_cols=45 Identities=20% Similarity=0.232 Sum_probs=39.8
Q ss_pred cccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 18 ~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
.|+..+||+|||+|++|+++|+.|++ .|.+|++|||.+..||...
T Consensus 16 ~~~~~~dv~iiG~G~~g~~~a~~l~~------~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 16 FQGEHYDVIILGTGLKECILSGLLSH------YGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp -CCCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGGGC
T ss_pred cccccCCEEEECCCHHHHHHHHHHHH------CCCcEEEEeccCCCCCCcc
Confidence 45667999999999999999999999 8999999999998887643
No 157
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.96 E-value=6.2e-10 Score=83.77 Aligned_cols=43 Identities=33% Similarity=0.570 Sum_probs=37.2
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
...+||+|||||++|+++|+.|++ .|.+|+|||+.+..||...
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~------~g~~v~v~E~~~~~GGr~~ 56 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRS------RGTDAVLLESSARLGGAVG 56 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHT------TTCCEEEECSSSSSBTTCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHH------CCCCEEEEEcCCCCCceee
Confidence 345799999999999999999999 8999999999999888653
No 158
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.95 E-value=6.7e-10 Score=83.58 Aligned_cols=40 Identities=38% Similarity=0.634 Sum_probs=36.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCC--ceEEEEecCCCCCCcc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKE--LKVCLVEKAAEVGGHI 67 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g--~~v~vlE~~~~~~g~~ 67 (182)
.+||+|||||++|+++|+.|++ .| .+|+|||+.+..||..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~------~g~~~~v~v~E~~~~~GG~~ 45 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAER------AFPDLNITLLEAGERLGGKV 45 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHH------HCTTSEEEEECSSSSSBTTC
T ss_pred cccEEEECCCHHHHHHHHHHHH------hCCCCCEEEEECCCCCCcee
Confidence 5799999999999999999999 67 9999999998887753
No 159
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.95 E-value=7.7e-10 Score=82.73 Aligned_cols=41 Identities=44% Similarity=0.703 Sum_probs=37.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
..+||+|||||++|+++|+.|++ .|.+|+|||+.+..||..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRK------AGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEECCCCCCCce
Confidence 45799999999999999999999 899999999999888765
No 160
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.94 E-value=9.2e-10 Score=83.41 Aligned_cols=42 Identities=33% Similarity=0.617 Sum_probs=37.3
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
...+||+|||||++||++|+.|++ +|++|+|||+.+..||..
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKI------HGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHT------TSCEEEEECSSSSSCSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEEeCCCCCCce
Confidence 345799999999999999999999 899999999999988764
No 161
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.94 E-value=3.1e-09 Score=79.11 Aligned_cols=36 Identities=36% Similarity=0.478 Sum_probs=32.1
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAAE 62 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~~ 62 (182)
+.+||+|||||++|+++|..|++ .|. +|+|||+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~------~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRA------SGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHc------cCcCCCEEEEECCCC
Confidence 35799999999999999999999 777 8999998764
No 162
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.93 E-value=1.4e-09 Score=83.34 Aligned_cols=37 Identities=32% Similarity=0.423 Sum_probs=32.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
++|+||||||.+|+.+|..|++. .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~-----~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTED-----PDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTS-----TTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhC-----cCCcEEEEecCCcc
Confidence 58999999999999999999972 58999999998644
No 163
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.93 E-value=3.3e-09 Score=83.37 Aligned_cols=41 Identities=39% Similarity=0.661 Sum_probs=36.8
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGH 66 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~ 66 (182)
...+||+|||||++|+++|+.|++ .|++|+|||+.+..+|.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~------~G~~V~liE~~~~~GG~ 429 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGV------RGYDVVLAEAGRDLGGR 429 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSCTH
T ss_pred cccceEEEECCCHHHHHHHHHHHH------CCCeEEEEecCCCCCCE
Confidence 446799999999999999999999 79999999999877754
No 164
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.92 E-value=4.1e-09 Score=79.50 Aligned_cols=38 Identities=32% Similarity=0.500 Sum_probs=32.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
.||+|||||++|+++|+.|++. ++|.+|+|||+.+..+
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRN----DENANVVTLEKGEIYS 74 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEECSSSCCS
T ss_pred ceEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCC
Confidence 5999999999999999999982 1389999999987543
No 165
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.91 E-value=5.5e-09 Score=81.88 Aligned_cols=39 Identities=36% Similarity=0.671 Sum_probs=35.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGG 65 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g 65 (182)
..+||+|||||++|+++|..|++ .|++|+|||+.+..+|
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~------~g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAA------RGHQVTLFDAHSEIGG 410 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCCCCCC
Confidence 35799999999999999999999 8999999999987765
No 166
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.90 E-value=2.1e-09 Score=80.08 Aligned_cols=43 Identities=19% Similarity=0.292 Sum_probs=38.9
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
|+.++||+|||+|++|+++|+.|++ .|.+|+++|+++..||..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~------~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSV------NGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCTTS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHH------CCCcEEEEecCCCccccc
Confidence 4456899999999999999999999 899999999999888764
No 167
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.90 E-value=3.3e-09 Score=77.85 Aligned_cols=38 Identities=24% Similarity=0.399 Sum_probs=33.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
++..|+|||||++|+++|..|.+ .+.+|+|||+.+..+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~------~~~~itlie~~~~~~ 45 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALG------KCDDITMINSEKYLP 45 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTT------TCSCEEEECSSSSCC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhC------CCCEEEEEECCCCCC
Confidence 45689999999999999999966 789999999987643
No 168
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.90 E-value=5.5e-09 Score=78.23 Aligned_cols=38 Identities=21% Similarity=0.197 Sum_probs=32.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
+||+|||||++|+++|..|++. ++|.+|+|||+.+..+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIAD----HPDADVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----CTTCEEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhh----CcCCcEEEEECCCCCC
Confidence 4899999999999999999982 1389999999987543
No 169
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.89 E-value=6.9e-09 Score=84.24 Aligned_cols=41 Identities=41% Similarity=0.691 Sum_probs=36.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..+|..
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~------~G~~V~lie~~~~~GG~~ 167 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASR------SGARVMLLDERAEAGGTL 167 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSSGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCCCCCcee
Confidence 45799999999999999999999 899999999998777543
No 170
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.89 E-value=1.3e-09 Score=79.45 Aligned_cols=39 Identities=38% Similarity=0.563 Sum_probs=36.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
+||+|||||++|+++|+.|++ .|.+|+|||+.+..||..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~------~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKK------LNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGG------GTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHh------CCCcEEEEecCCCCCcce
Confidence 689999999999999999999 799999999998888764
No 171
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.88 E-value=2.3e-09 Score=80.89 Aligned_cols=42 Identities=33% Similarity=0.485 Sum_probs=37.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCCCCCCccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~~~~g~~~ 68 (182)
..+||+|||||++|+++|+.|++ .| .+|+|||+.+..||...
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~------~g~~~v~v~E~~~~~GG~~~ 50 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTE------LGYKNWHLYECNDTPGGLSR 50 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHH------TTCCSEEEEESSSSSSGGGC
T ss_pred cCCCEEEECcCHHHHHHHHHHHH------cCCCCEEEEeCCCCCCCeee
Confidence 45799999999999999999999 77 79999999998887654
No 172
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.88 E-value=2.3e-09 Score=78.63 Aligned_cols=40 Identities=25% Similarity=0.517 Sum_probs=36.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
+.||+|||||++|+++|+.|++ .|.+|+|+|+.+..||..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~------~g~~v~v~E~~~~~GG~~ 42 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE------KGHQVHIIDQRDHIGGNS 42 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSSSGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHH------CCCcEEEEEecCCcCCcc
Confidence 4689999999999999999999 899999999998888754
No 173
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.88 E-value=4e-09 Score=81.03 Aligned_cols=38 Identities=26% Similarity=0.525 Sum_probs=32.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
.||+|||||++|+++|+.|++. +.+.+|+|||+.+..+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~----~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRL----SETAEIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CSSSEEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhh----CcCCCEEEEECCCCcc
Confidence 3799999999999999999982 2488999999987653
No 174
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.87 E-value=1.7e-09 Score=80.97 Aligned_cols=44 Identities=41% Similarity=0.651 Sum_probs=37.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccc
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAV 72 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~ 72 (182)
+||+|||||++|+++|+.|++ .|.+|+|||+.+..||.....++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~------~g~~V~lie~~~~~GG~~~~~g~ 45 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQ------LGMKVGVVEKEKALGGTCLRVGC 45 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSSSSSHHHHHHSH
T ss_pred CCEEEECCChhHHHHHHHHHH------CCCeEEEEeCCCCCCCccceecc
Confidence 799999999999999999999 89999999999777765443333
No 175
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.85 E-value=2.3e-09 Score=81.13 Aligned_cols=45 Identities=36% Similarity=0.422 Sum_probs=37.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcccccccc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVI 73 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~ 73 (182)
.+||+|||||++|+++|+.|++ .|.+|+|||+++ .||....-+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~------~G~~V~liE~~~-~GGtc~~~gci 52 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK------HTDKVVLIEGGA-YGTTCARVGCM 52 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT------TCSCEEEEESSC-SSCHHHHHSHH
T ss_pred CCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCC-CCCcccccChh
Confidence 5899999999999999999999 899999999975 66654333333
No 176
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.84 E-value=1.9e-08 Score=73.72 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=30.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCC--ceEEEEecCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKE--LKVCLVEKAA 61 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g--~~v~vlE~~~ 61 (182)
..+||+|||||++|+++|..|++ .| .+|+++|+++
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~------~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRK------LDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHT------TCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHh------hCCCCCEEEEECCC
Confidence 35799999999999999999998 66 5799999874
No 177
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.84 E-value=2e-09 Score=80.82 Aligned_cols=40 Identities=30% Similarity=0.552 Sum_probs=35.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
..+||+|||||++|+++|+.|++ .|.+|+|||+. ..+|..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~------~g~~V~liE~~-~~GG~~ 42 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAA------FGKRVALIESK-ALGGTC 42 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESS-CTTHHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHh------CCCcEEEEcCC-CCCCcC
Confidence 46899999999999999999999 89999999998 556543
No 178
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.84 E-value=9.7e-09 Score=76.77 Aligned_cols=37 Identities=22% Similarity=0.345 Sum_probs=32.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
||+|||||++|+++|..|++. ++|.+|+|||+.+..+
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~----~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNL----HPDAEIQWYEKGDFIS 38 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHH----CTTSEEEEEESSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHHh----CcCCeEEEEECCCccC
Confidence 799999999999999999982 1389999999987543
No 179
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.83 E-value=3.9e-09 Score=81.93 Aligned_cols=41 Identities=34% Similarity=0.404 Sum_probs=36.0
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGH 66 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~ 66 (182)
+..+||+|||||++|+++|+.|++ +|++|+|||+.+..++.
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~------~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVG------AGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCCCSSS
T ss_pred cccCCEEEECCcHHHHHHHHHHHh------CCCcEEEEeccCCCCCc
Confidence 356899999999999999999999 89999999999877653
No 180
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.83 E-value=1.9e-09 Score=80.64 Aligned_cols=40 Identities=33% Similarity=0.529 Sum_probs=35.2
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
..+||+|||||++|+++|+.|++ .|.+|+|||++ ..+|..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~------~g~~V~liE~~-~~GG~~ 42 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAM------YGQKCALIEAK-ELGGTC 42 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT------TTCCEEEEESS-CTTHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHh------CCCeEEEEcCC-CCCCcc
Confidence 45899999999999999999999 89999999998 456543
No 181
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.83 E-value=3.9e-09 Score=79.88 Aligned_cols=41 Identities=37% Similarity=0.555 Sum_probs=37.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
...||+|||||++|+++|+.|++ .|.+|+|||+.+..||..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~------~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG------AGHQVTVLEASERPGGRV 72 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH------HTCEEEEECSSSSSBTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHh------CCCeEEEEECCCCCCCce
Confidence 35799999999999999999999 799999999999888864
No 182
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.82 E-value=4e-08 Score=76.04 Aligned_cols=34 Identities=24% Similarity=0.446 Sum_probs=31.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
..+||+|||||++|+++|..|++ .|.+|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~------~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAK------YGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHH------TTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHh------CCCeEEEEecc
Confidence 45899999999999999999999 89999999984
No 183
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.79 E-value=7.7e-09 Score=77.47 Aligned_cols=41 Identities=34% Similarity=0.555 Sum_probs=36.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~ 67 (182)
...||+|||||++|+++|+.|++ .|++|+|||+.+..+|..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~------~G~~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRA------KGYEVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHH------HTCCEEEECSSSSCSTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHH------CCCeEEEEeccCCCCCee
Confidence 45799999999999999999999 799999999998877654
No 184
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.78 E-value=3.7e-09 Score=78.15 Aligned_cols=36 Identities=31% Similarity=0.496 Sum_probs=30.7
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
+|+|||||++|+++|..|++.. +.|.+|+|||+.+.
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~---~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLV---GSKADVKVINKSRF 38 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHH---GGGSEEEEEESSSE
T ss_pred eEEEECCCHHHHHHHHHHHhhC---CCCCeEEEEeCCCC
Confidence 7999999999999999998721 14789999999873
No 185
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.77 E-value=5.9e-09 Score=76.94 Aligned_cols=35 Identities=29% Similarity=0.612 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~~~ 63 (182)
.||+|||||++|+++|..|++ .|. +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~------~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ------AKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH------TTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHh------hCcCCCEEEEeCCCCC
Confidence 479999999999999999999 777 89999998743
No 186
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.74 E-value=2e-08 Score=79.62 Aligned_cols=41 Identities=39% Similarity=0.668 Sum_probs=36.8
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGH 66 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~ 66 (182)
...+||+|||||++|+++|+.|++ .|++|+|||+.+..||.
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~------~g~~v~v~E~~~~~ggr 374 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHN------FGIKVTVLEAKDRIGGR 374 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEecccceece
Confidence 345799999999999999999999 79999999998888773
No 187
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.71 E-value=2.3e-07 Score=67.97 Aligned_cols=92 Identities=18% Similarity=0.192 Sum_probs=65.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
..+++|||+|+.|+.+|..|++ .|.+|+++|+.+.....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~~~~----------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS------GGYQLDVVAPCEQVMPG----------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSSTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCcchhhc-----------------------------------
Confidence 3579999999999999999999 89999999987643210
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCCEEEe
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGDVGIA 176 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi~ 176 (182)
.....+.+.+.+.+++.|++++++++|++++.++++..+. ....|.||.
T Consensus 184 --------------------------~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~ 237 (384)
T 2v3a_A 184 --------------------------LLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVS 237 (384)
T ss_dssp --------------------------TSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEE
T ss_pred --------------------------ccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEE
Confidence 0012456677777888899999999999997644322111 223466776
Q ss_pred cCCC
Q psy2240 177 KDGS 180 (182)
Q Consensus 177 adG~ 180 (182)
|.|.
T Consensus 238 a~G~ 241 (384)
T 2v3a_A 238 AVGL 241 (384)
T ss_dssp CSCE
T ss_pred CcCC
Confidence 6664
No 188
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.71 E-value=1.6e-08 Score=76.08 Aligned_cols=41 Identities=29% Similarity=0.593 Sum_probs=36.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCCCCCcc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAEVGGHI 67 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~~~g~~ 67 (182)
..+||+|||||++|+++|+.|++ .|. +|+|+|+.+..||..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~------~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSE------AGITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHH------TTCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHh------cCCCceEEEeCCCCCCCce
Confidence 35799999999999999999999 898 899999998888754
No 189
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.68 E-value=8.7e-08 Score=71.45 Aligned_cols=37 Identities=38% Similarity=0.563 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.||+|||||++|+++|+.|++.. ..|.+|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~---~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEAL---GSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHH---GGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccC---CCcCEEEEEeCCCC
Confidence 58999999999999999998722 14789999999863
No 190
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.66 E-value=3.3e-07 Score=68.84 Aligned_cols=71 Identities=17% Similarity=0.226 Sum_probs=56.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
.+++|||||..|+.+|..|++ .|.+|+++|+.+.....
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRR------LGAEVTLIEYMPEILPQ------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSTT------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCeEEEEEcCCccccc------------------------------------
Confidence 479999999999999999999 89999999987653210
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG 161 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~ 161 (182)
....+.+.+.+.+++.|++++++++|++++.++
T Consensus 208 --------------------------~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~ 240 (464)
T 2eq6_A 208 --------------------------GDPETAALLRRALEKEGIRVRTKTKAVGYEKKK 240 (464)
T ss_dssp --------------------------SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEET
T ss_pred --------------------------cCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC
Confidence 001455667777788899999999999987643
No 191
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.65 E-value=4.2e-07 Score=68.06 Aligned_cols=90 Identities=17% Similarity=0.245 Sum_probs=64.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
.+++|||||++|+.+|..|++ .|.+|+++|+.+..... .
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~------~g~~V~lv~~~~~~l~~------~----------------------------- 206 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHR------LGAEVIVLEYMDRILPT------M----------------------------- 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTT------S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCEEEEEecCCccccc------c-----------------------------
Confidence 479999999999999999999 89999999987643100 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCCEEEec
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGDVGIAK 177 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi~a 177 (182)
...+.+.+.+.+++.|++++.+++|++++.++++..+. ....|.||.|
T Consensus 207 ---------------------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A 259 (455)
T 2yqu_A 207 ---------------------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVA 259 (455)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred ---------------------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEEC
Confidence 01345556677777899999999999998644322111 2234667666
Q ss_pred CCC
Q psy2240 178 DGS 180 (182)
Q Consensus 178 dG~ 180 (182)
.|.
T Consensus 260 ~G~ 262 (455)
T 2yqu_A 260 VGR 262 (455)
T ss_dssp SCE
T ss_pred cCC
Confidence 664
No 192
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.64 E-value=2.5e-08 Score=75.43 Aligned_cols=33 Identities=24% Similarity=0.562 Sum_probs=29.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEe
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVE 58 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE 58 (182)
..+||+|||||++|+++|+.|++. .|.+|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~-----~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASL-----HKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHH-----HCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHH-----cCCEEEEEe
Confidence 358999999999999999999872 378999999
No 193
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.63 E-value=4.6e-08 Score=76.55 Aligned_cols=41 Identities=37% Similarity=0.638 Sum_probs=37.1
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCc
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGH 66 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~ 66 (182)
....||+|||+|++|+++|+.|++ .|++|+|+|+.+..||.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~------~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQS------FGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHH------TTCEEEEECSSSSSBTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHH------CCCeEEEEecCCCCCCc
Confidence 345799999999999999999999 89999999999888774
No 194
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.63 E-value=5.8e-08 Score=76.76 Aligned_cols=42 Identities=38% Similarity=0.632 Sum_probs=37.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..+|...
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~------~G~~Vtlie~~~~~GG~~~ 429 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLME------SGYTVHLTDTAEKIGGHLN 429 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTTTTHH
T ss_pred CCceEEEECCCHHHHHHHHHHHH------CCCeEEEEeCCCCcCCeee
Confidence 35799999999999999999999 8999999999988877653
No 195
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.63 E-value=6.5e-07 Score=66.93 Aligned_cols=90 Identities=24% Similarity=0.276 Sum_probs=65.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
..+++|||||++|+.+|..|++ .|.+|+++|+.+.+...
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~----------------------------------- 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAK------AGKKVTVIDILDRPLGV----------------------------------- 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTTTT-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCeEEEEecCcccccc-----------------------------------
Confidence 4689999999999999999999 89999999988643210
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE------EEeCCEEE
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG------IATGDVGI 175 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~------v~~~~~vi 175 (182)
.+ ...+.+.+.+.+++.|++++++++|++++.+ +.+.. ....|.||
T Consensus 188 ------------~~--------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~v~~v~~~~~~i~~d~vi 239 (447)
T 1nhp_A 188 ------------YL--------------DKEFTDVLTEEMEANNITIATGETVERYEGD--GRVQKVVTDKNAYDADLVV 239 (447)
T ss_dssp ------------TC--------------CHHHHHHHHHHHHTTTEEEEESCCEEEEECS--SBCCEEEESSCEEECSEEE
T ss_pred ------------cC--------------CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc--CcEEEEEECCCEEECCEEE
Confidence 00 0245667777888889999999999999753 32211 23456777
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 240 ~a~G~ 244 (447)
T 1nhp_A 240 VAVGV 244 (447)
T ss_dssp ECSCE
T ss_pred ECcCC
Confidence 77664
No 196
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.63 E-value=3e-08 Score=75.95 Aligned_cols=37 Identities=41% Similarity=0.596 Sum_probs=33.6
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
+.++|+||||+|++|+++|..|++ .|.+|+|||+.+.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~------~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE------AGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCCC
Confidence 356899999999999999999999 8999999999864
No 197
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.62 E-value=2.2e-08 Score=76.31 Aligned_cols=37 Identities=43% Similarity=0.619 Sum_probs=32.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
++||+||||+|.+|+.+|..|++. .+.+|+|||+++.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~-----~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSED-----PDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTS-----TTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhC-----CCCeEEEEcCCCC
Confidence 479999999999999999999962 4789999999964
No 198
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.61 E-value=6.5e-08 Score=77.38 Aligned_cols=40 Identities=38% Similarity=0.644 Sum_probs=36.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGH 66 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~ 66 (182)
...+|+|||+|++|+++|+.|++ .|++|+|||+.+.+||.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~------~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQS------FGMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHH------CCCcEEEEEecCcCCCc
Confidence 45699999999999999999999 89999999999888874
No 199
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.59 E-value=9.2e-07 Score=66.17 Aligned_cols=90 Identities=22% Similarity=0.150 Sum_probs=64.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+.+|..|++ .|.+|+++|+.+..... + +
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~------~---------~------------------- 207 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVING------LGAKTHLFEMFDAPLPS------F---------D------------------- 207 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSTT------S---------C-------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh------cCCEEEEEEeCCchhhh------h---------h-------------------
Confidence 479999999999999999999 89999999987542100 0 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE-E-----EEeCCEEEe
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK-G-----IATGDVGIA 176 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~-~-----v~~~~~vi~ 176 (182)
..+.+.+.+.+++.|++++++++|++++.++++.+. . ....|.||.
T Consensus 208 ----------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~ 259 (450)
T 1ges_A 208 ----------------------------PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIW 259 (450)
T ss_dssp ----------------------------HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEE
T ss_pred ----------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEE
Confidence 024455666777789999999999999864444221 1 233466777
Q ss_pred cCCC
Q psy2240 177 KDGS 180 (182)
Q Consensus 177 adG~ 180 (182)
|.|.
T Consensus 260 a~G~ 263 (450)
T 1ges_A 260 AIGR 263 (450)
T ss_dssp CSCE
T ss_pred CCCC
Confidence 7664
No 200
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.57 E-value=1e-06 Score=66.37 Aligned_cols=69 Identities=20% Similarity=0.284 Sum_probs=56.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
.+++|||||..|+-+|..|++ .|.+|+++|+.+...... +
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~~---------------~------------------- 223 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSR------LGSKVTVVEFQPQIGASM---------------D------------------- 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSSSS---------------C-------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH------cCCEEEEEEeCCcccccc---------------C-------------------
Confidence 479999999999999999999 899999999986543100 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLY 159 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~ 159 (182)
..+.+.+.+.+++.|++++++++|+++..
T Consensus 224 ----------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~ 252 (478)
T 1v59_A 224 ----------------------------GEVAKATQKFLKKQGLDFKLSTKVISAKR 252 (478)
T ss_dssp ----------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEE
T ss_pred ----------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEE
Confidence 24566777777888999999999999975
No 201
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=1.1e-06 Score=65.81 Aligned_cols=90 Identities=20% Similarity=0.252 Sum_probs=64.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
.+++|||||..|+-+|..|++ .|.+|+++|+.+....
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~------------------------------------- 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYAN------FGTKVTILEGAGEILS------------------------------------- 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSST-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCcEEEEEcCCcccc-------------------------------------
Confidence 579999999999999999999 8999999998764310
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE--------EEeCCEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG--------IATGDVG 174 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~--------v~~~~~v 174 (182)
.+ ...+.+.+.+.+++.|++++.+++|++++.++++..+. ....|.|
T Consensus 208 -----------~~--------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~v 262 (455)
T 1ebd_A 208 -----------GF--------------EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYV 262 (455)
T ss_dssp -----------TS--------------CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEE
T ss_pred -----------cc--------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEE
Confidence 00 01355566777788899999999999997644332221 1234667
Q ss_pred EecCCC
Q psy2240 175 IAKDGS 180 (182)
Q Consensus 175 i~adG~ 180 (182)
|.|.|.
T Consensus 263 v~a~G~ 268 (455)
T 1ebd_A 263 LVTVGR 268 (455)
T ss_dssp EECSCE
T ss_pred EECcCC
Confidence 766664
No 202
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.53 E-value=2.9e-06 Score=62.81 Aligned_cols=91 Identities=23% Similarity=0.333 Sum_probs=67.6
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
...++|||+|..|+-+|..|++ .|.+|+++|+.+....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtvv~~~~~~l~------------------------------------ 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK------FGVNVTLLEALPRVLA------------------------------------ 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTTT------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCeEEEEecCCchhh------------------------------------
Confidence 3579999999999999999999 8999999998764310
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEEE-------eCCEE
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIA-------TGDVG 174 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v~-------~~~~v 174 (182)
.. ....+.+.+.+.+++.|++++++++|++++. +++.+.++. ..|.|
T Consensus 190 -----------~~--------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~V 243 (415)
T 3lxd_A 190 -----------RV--------------AGEALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIV 243 (415)
T ss_dssp -----------TT--------------SCHHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEE
T ss_pred -----------hh--------------cCHHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEE
Confidence 00 0024666777788889999999999999986 444544433 35777
Q ss_pred EecCCC
Q psy2240 175 IAKDGS 180 (182)
Q Consensus 175 i~adG~ 180 (182)
|.|.|.
T Consensus 244 v~a~G~ 249 (415)
T 3lxd_A 244 IVGIGI 249 (415)
T ss_dssp EECSCC
T ss_pred EECCCC
Confidence 777664
No 203
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.51 E-value=1.1e-07 Score=71.99 Aligned_cols=41 Identities=24% Similarity=0.408 Sum_probs=34.2
Q ss_pred ccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 19 FEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 19 ~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
++..+||+|||||++|+++|..|.+. +.|.+|+|||+.+..
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~----~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRAR----DPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHH----STTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhc----CCCCeEEEEeCCCCC
Confidence 34568999999999999999999872 248999999998654
No 204
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.51 E-value=1e-07 Score=70.43 Aligned_cols=37 Identities=30% Similarity=0.358 Sum_probs=32.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAAEV 63 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~~~ 63 (182)
..+||+|||||++|+++|..|++ .|. +|+|||+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~------~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQ------AGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHH------HTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHc------cCCCCeEEEEECCCCC
Confidence 45799999999999999999999 566 59999998754
No 205
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.50 E-value=3.3e-06 Score=62.31 Aligned_cols=90 Identities=24% Similarity=0.377 Sum_probs=66.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|.+ .|.+|+++|+.+.....
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtvv~~~~~~~~~------------------------------------ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARA------KGLEVDVVELAPRVMAR------------------------------------ 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTTTT------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCCcchhh------------------------------------
Confidence 479999999999999999999 89999999987532100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE-------EeCCEEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI-------ATGDVGI 175 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v-------~~~~~vi 175 (182)
. ....+.+.+.+.+++.|++++++++|++++.+ ++.+.++ ...|.||
T Consensus 181 ------------------------~-~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv 234 (404)
T 3fg2_P 181 ------------------------V-VTPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVV 234 (404)
T ss_dssp ------------------------T-SCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEE
T ss_pred ------------------------c-cCHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEE
Confidence 0 01246667778888899999999999999763 3444433 3357777
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 235 ~a~G~ 239 (404)
T 3fg2_P 235 VGVGV 239 (404)
T ss_dssp ECCCE
T ss_pred ECcCC
Confidence 77664
No 206
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.49 E-value=2.4e-06 Score=64.36 Aligned_cols=74 Identities=20% Similarity=0.249 Sum_probs=57.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+......
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~~----------------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQR------LGADVTAVEFLGHVGGVG----------------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSCSS-----------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH------cCCEEEEEeccCccCCcc-----------------------------------
Confidence 479999999999999999999 899999999876432100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG 163 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g 163 (182)
+ + ..+.+.+.+.+++.|++++++++|++++.++++
T Consensus 218 ---------~----------------~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 252 (474)
T 1zmd_A 218 ---------I----------------D-MEISKNFQRILQKQGFKFKLNTKVTGATKKSDG 252 (474)
T ss_dssp ---------C----------------C-HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTS
T ss_pred ---------c----------------C-HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCc
Confidence 0 0 135556777778889999999999999865444
No 207
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.47 E-value=1.7e-07 Score=76.62 Aligned_cols=40 Identities=30% Similarity=0.495 Sum_probs=35.8
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCCCCCc
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAEVGGH 66 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~~~g~ 66 (182)
..+||+|||||++|+++|..|++ .|+ +|+|||+.+..+|.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~------~G~~~Vtv~E~~~~~GG~ 226 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR------LGYSDITIFEKQEYVGGL 226 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH------TTCCCEEEEESSSSCSTH
T ss_pred CCCEEEEECccHHHHHHHHHHHh------cCCCcEEEEeCCCCCCcc
Confidence 35799999999999999999999 898 79999999877764
No 208
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.46 E-value=1.9e-07 Score=69.98 Aligned_cols=45 Identities=24% Similarity=0.315 Sum_probs=35.3
Q ss_pred cccEEEECCChHHHHHHHHHHH-hhhhcCCCceEEEEecCCCCCCc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQ-LAEKDGKELKVCLVEKAAEVGGH 66 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~-~~~~~~~g~~v~vlE~~~~~~g~ 66 (182)
.+||+|||||++|+++|..|++ ....+..|.+|+|||+.+.++|.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~ 48 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL 48 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc
Confidence 4699999999999999999987 42100017999999999877654
No 209
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.45 E-value=9.2e-08 Score=73.08 Aligned_cols=37 Identities=38% Similarity=0.551 Sum_probs=33.0
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..++|+||||+|.+|+.+|..|++ |.+|+|||+++..
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-------g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-------KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-------TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-------CCcEEEEecCCCc
Confidence 356899999999999999999986 6899999999754
No 210
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.44 E-value=3.6e-06 Score=63.50 Aligned_cols=89 Identities=22% Similarity=0.349 Sum_probs=65.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
..+++|||||++|+.+|..|++ .|.+|+++|+.+.....
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~----------------------------------- 224 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVE------LGKKVRMIERNDHIGTI----------------------------------- 224 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH------TTCEEEEECCGGGTTSS-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh------cCCeEEEEEeCCchhhc-----------------------------------
Confidence 3579999999999999999999 89999999987543200
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE------EEeCCEEE
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG------IATGDVGI 175 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~------v~~~~~vi 175 (182)
+ ...+.+.+.+.+++.|++++++++|+++..+ +.+.. ....|.||
T Consensus 225 ----------~-----------------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~v~~v~~~~~~i~~D~vi 275 (480)
T 3cgb_A 225 ----------Y-----------------DGDMAEYIYKEADKHHIEILTNENVKAFKGN--ERVEAVETDKGTYKADLVL 275 (480)
T ss_dssp ----------S-----------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SBEEEEEETTEEEECSEEE
T ss_pred ----------C-----------------CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC--CcEEEEEECCCEEEcCEEE
Confidence 0 0135566777788889999999999999753 33322 23456777
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 276 ~a~G~ 280 (480)
T 3cgb_A 276 VSVGV 280 (480)
T ss_dssp ECSCE
T ss_pred ECcCC
Confidence 66664
No 211
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.42 E-value=3.7e-07 Score=70.69 Aligned_cols=45 Identities=20% Similarity=0.273 Sum_probs=40.2
Q ss_pred cccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccc
Q psy2240 18 RFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHIL 68 (182)
Q Consensus 18 ~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~ 68 (182)
.++++||++|||+|..|+.+|..|++ .|.+|++|||++..||...
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~------~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSR------SGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSSSCGGGC
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHh------CCCEEEEEcCCCcccCccc
Confidence 34557999999999999999999999 8999999999999887643
No 212
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.42 E-value=3e-06 Score=63.67 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||||..|+.+|..|++ .|.+|+++|+.+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~------~G~~Vtlv~~~~~ 200 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRS------FGSEVTVVALEDR 200 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------cCCEEEEEEcCCc
Confidence 479999999999999999999 8999999998754
No 213
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.42 E-value=5.2e-06 Score=61.36 Aligned_cols=89 Identities=22% Similarity=0.312 Sum_probs=64.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++|+.+.....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtvv~~~~~~l~~------------------------------------ 181 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARK------LGLSVTILEAGDELLVR------------------------------------ 181 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSHH------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCccchh------------------------------------
Confidence 479999999999999999999 89999999987643200
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-------EEeCCEEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-------IATGDVGI 175 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-------v~~~~~vi 175 (182)
.+ ...+.+.+.+.+++.|++++++++|++++.++ .+.+ ....|.||
T Consensus 182 ~~-------------------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~dg~~i~aD~Vv 234 (410)
T 3ef6_A 182 VL-------------------------GRRIGAWLRGLLTELGVQVELGTGVVGFSGEG--QLEQVMASDGRSFVADSAL 234 (410)
T ss_dssp HH-------------------------CHHHHHHHHHHHHHHTCEEECSCCEEEEECSS--SCCEEEETTSCEEECSEEE
T ss_pred hc-------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECCCCEEEcCEEE
Confidence 00 01455667777788899999999999997532 2222 23457777
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 235 ~a~G~ 239 (410)
T 3ef6_A 235 ICVGA 239 (410)
T ss_dssp ECSCE
T ss_pred EeeCC
Confidence 77664
No 214
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.42 E-value=2.9e-07 Score=69.89 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=33.9
Q ss_pred cccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 20 EDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 20 ~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|++|||+|++|+.+|..|++ .|.+|+|||+...
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~ 45 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQ------AGIPTQIVEMGRS 45 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH------TTCCEEEECSSCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHH------CCCcEEEEECCCC
Confidence 457899999999999999999999 8999999999863
No 215
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.41 E-value=5.8e-06 Score=62.15 Aligned_cols=90 Identities=17% Similarity=0.165 Sum_probs=64.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+..... +
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~------~----------------------------- 213 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWAR------LGAEVTVVEFAPRCAPT------L----------------------------- 213 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSTT------S-----------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH------hCCEEEEEecCCccccc------C-----------------------------
Confidence 479999999999999999999 89999999987643210 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHH-HHcCcEEecCCccceeEEcCCCcEEE---------EEeCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQA-EAMGVEIYPGIPASEVLYHGDGSVKG---------IATGD 172 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~gv~i~~~~~v~~i~~~~~g~~~~---------v~~~~ 172 (182)
...+.+.+.+.+ ++.|++++.+++|++++.++++..+. ....|
T Consensus 214 ---------------------------d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D 266 (468)
T 2qae_A 214 ---------------------------DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCE 266 (468)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEES
T ss_pred ---------------------------CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECC
Confidence 013456677777 78899999999999998644332211 22346
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
.||.|.|.
T Consensus 267 ~vv~a~G~ 274 (468)
T 2qae_A 267 ALLVSVGR 274 (468)
T ss_dssp EEEECSCE
T ss_pred EEEECCCc
Confidence 66666663
No 216
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.41 E-value=8.2e-06 Score=60.73 Aligned_cols=91 Identities=24% Similarity=0.331 Sum_probs=64.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.+...
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~------~G~~Vtlv~~~~~~l~~------------------------------------ 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIK------ANMHVTLLDTAARVLER------------------------------------ 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSTTTT------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCEEEEEEeCCccccc------------------------------------
Confidence 479999999999999999999 89999999986542100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEc-CCCcEEEE-------EeCCEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYH-GDGSVKGI-------ATGDVG 174 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~g~~~~v-------~~~~~v 174 (182)
.+ ...+.+.+.+.+++.|++++++++|+++..+ +++.+..+ ...|.|
T Consensus 188 ------------------------~~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~V 242 (431)
T 1q1r_A 188 ------------------------VT-APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLV 242 (431)
T ss_dssp ------------------------TS-CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEE
T ss_pred ------------------------hh-hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEE
Confidence 00 0135556677777889999999999999752 23433332 345777
Q ss_pred EecCCC
Q psy2240 175 IAKDGS 180 (182)
Q Consensus 175 i~adG~ 180 (182)
|.|.|.
T Consensus 243 v~a~G~ 248 (431)
T 1q1r_A 243 IAGIGL 248 (431)
T ss_dssp EECCCE
T ss_pred EECCCC
Confidence 777663
No 217
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.41 E-value=2.7e-07 Score=69.26 Aligned_cols=39 Identities=31% Similarity=0.420 Sum_probs=34.6
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCC--ceEEEEecCCCCCCc
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKE--LKVCLVEKAAEVGGH 66 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g--~~v~vlE~~~~~~g~ 66 (182)
.+||+|||||++|+.+|..|++ .| .+|+|||+.+.++|.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~------~g~~~~V~vie~~~~~gg~ 46 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLK------HHSRAHVDIYEKQLVPFGL 46 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------HCSSCEEEEECSSSSSCTH
T ss_pred CceEEEECcCHHHHHHHHHHHh------cCCCCCEEEEeCCCcCCce
Confidence 4689999999999999999998 56 999999999877653
No 218
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.40 E-value=3.1e-07 Score=68.29 Aligned_cols=37 Identities=35% Similarity=0.634 Sum_probs=32.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.||+|||||++|+++|+.|++. ++|.+|+|||+.+..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~----~~g~~Vtlie~~~~~ 39 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPYF 39 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSEE
T ss_pred CCEEEECccHHHHHHHHHHHcC----CCCCeEEEECCCCCC
Confidence 5899999999999999999983 257899999998754
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=2.2e-07 Score=67.69 Aligned_cols=35 Identities=37% Similarity=0.560 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
-.|++|||||++|+++|..|++ .| +|+|||+.+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~------~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ------TY-EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT------TS-EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhh------cC-CEEEEECCCCC
Confidence 3699999999999999999998 78 99999998753
No 220
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.40 E-value=3.7e-07 Score=67.49 Aligned_cols=36 Identities=22% Similarity=0.503 Sum_probs=31.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCce--EEEEecCCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELK--VCLVEKAAEVG 64 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~--v~vlE~~~~~~ 64 (182)
.+|+|||||++|+++|..|++ .|.+ |+|||+.+...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~------~g~~~~V~li~~~~~~~ 40 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA------EGFEGRISLIGDEPHLP 40 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCSEEEEEECSSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHc------cCcCCeEEEEECCCCCC
Confidence 389999999999999999999 6766 99999987644
No 221
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.39 E-value=3.7e-07 Score=69.28 Aligned_cols=36 Identities=19% Similarity=0.353 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.++|++|||+|++|+++|+.|++ .|.+|+|||+.+.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~------~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE------AGVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh------CCCcEEEEeCCCC
Confidence 46899999999999999999999 8999999999874
No 222
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=3e-06 Score=63.57 Aligned_cols=35 Identities=29% Similarity=0.537 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.+++|||||.+|+.+|..|++ .|.+|+++|+.+..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRK------LGAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHH------CCCeEEEEEcCCcc
Confidence 479999999999999999999 78999999988643
No 223
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.37 E-value=9.5e-06 Score=61.27 Aligned_cols=90 Identities=20% Similarity=0.194 Sum_probs=64.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
.+++|||+|..|+-+|..|++ .|.+|+++++.+...... +
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~------~g~~Vtli~~~~~~l~~~---------------~------------------- 231 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHG------LGVKTTLLHRGDLILRNF---------------D------------------- 231 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSTTS---------------C-------------------
T ss_pred CcEEEECcCHHHHHHHHHHHH------cCCeEEEEECCCcccccc---------------C-------------------
Confidence 479999999999999999999 899999999876431000 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCCEEEec
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGDVGIAK 177 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi~a 177 (182)
..+.+.+.+.+++.|++++.+++|++++.++++..+. ....|.||.|
T Consensus 232 ----------------------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A 283 (484)
T 3o0h_A 232 ----------------------------YDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLA 283 (484)
T ss_dssp ----------------------------HHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEEC
T ss_pred ----------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEe
Confidence 1345567777778899999999999998744432221 2234667777
Q ss_pred CCC
Q psy2240 178 DGS 180 (182)
Q Consensus 178 dG~ 180 (182)
.|.
T Consensus 284 ~G~ 286 (484)
T 3o0h_A 284 TGR 286 (484)
T ss_dssp CCE
T ss_pred eCC
Confidence 664
No 224
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=2.6e-06 Score=64.04 Aligned_cols=90 Identities=22% Similarity=0.255 Sum_probs=63.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.....
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtli~~~~~~l~~------------------------------------ 215 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGR------IGSEVTVVEFASEIVPT------------------------------------ 215 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHH------HTCEEEEECSSSSSSTT------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCcEEEEEcCCccccc------------------------------------
Confidence 479999999999999999999 78999999988643210
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----------EEeCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----------IATGD 172 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----------v~~~~ 172 (182)
+ ...+.+.+.+.+++.|++++.+++|+++..++++..+. ....|
T Consensus 216 ---------~-----------------~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D 269 (470)
T 1dxl_A 216 ---------M-----------------DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEAD 269 (470)
T ss_dssp ---------S-----------------CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEES
T ss_pred ---------c-----------------cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECC
Confidence 0 01345566777788899999999999997543332221 12346
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
.||.|.|.
T Consensus 270 ~vv~a~G~ 277 (470)
T 1dxl_A 270 VVLVSAGR 277 (470)
T ss_dssp EEECCCCE
T ss_pred EEEECCCC
Confidence 67766663
No 225
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.36 E-value=6.9e-06 Score=62.14 Aligned_cols=90 Identities=22% Similarity=0.151 Sum_probs=64.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCC---CceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGK---ELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~---g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
..++|||||..|+-+|..|++ . |.+|+++|+.+..... +
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~------~~~~g~~Vtlv~~~~~~l~~-----------------------------~--- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNA------YKARGGQVDLAYRGDMILRG-----------------------------F--- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHH------HSCTTCEEEEEESSSSSSTT-----------------------------S---
T ss_pred CeEEEECCCHHHHHHHHHHHh------hccCcCeEEEEEcCCCcccc-----------------------------c---
Confidence 479999999999999999998 6 8999999987643200 0
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE-E-----EEeCCE
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK-G-----IATGDV 173 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~-~-----v~~~~~ 173 (182)
...+.+.+.+.+++.|++|+++++|++++.++++.+. . ....|.
T Consensus 230 ------------------------------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~ 279 (490)
T 1fec_A 230 ------------------------------DSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDV 279 (490)
T ss_dssp ------------------------------CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred ------------------------------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCE
Confidence 0135566777778889999999999999864433221 1 223456
Q ss_pred EEecCCC
Q psy2240 174 GIAKDGS 180 (182)
Q Consensus 174 vi~adG~ 180 (182)
||.|.|.
T Consensus 280 vv~a~G~ 286 (490)
T 1fec_A 280 VMLAIGR 286 (490)
T ss_dssp EEECSCE
T ss_pred EEEccCC
Confidence 6666553
No 226
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.36 E-value=8.2e-06 Score=61.06 Aligned_cols=90 Identities=20% Similarity=0.216 Sum_probs=64.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++|+.+......
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~~----------------------------------- 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSN------QNYNVNLIDGHERVLYKY----------------------------------- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHT------TTCEEEEEESSSSTTTTT-----------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHh------cCCEEEEEEcCCchhhhh-----------------------------------
Confidence 479999999999999999998 799999999876432100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEE------EeCCEEEe
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGI------ATGDVGIA 176 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v------~~~~~vi~ 176 (182)
+ + ..+.+.+.+.+++.|++++.+++|++++. +++.+..+ ...|.||.
T Consensus 189 ---------~----------------~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~~g~~i~~D~vv~ 241 (452)
T 2cdu_A 189 ---------F----------------D-KEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTLDGKEIKSDIAIL 241 (452)
T ss_dssp ---------S----------------C-HHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEETTSCEEEESEEEE
T ss_pred ---------h----------------h-hhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEeCCCEEECCEEEE
Confidence 0 0 13556667777888999999999999975 23433322 23466666
Q ss_pred cCCC
Q psy2240 177 KDGS 180 (182)
Q Consensus 177 adG~ 180 (182)
|.|.
T Consensus 242 a~G~ 245 (452)
T 2cdu_A 242 CIGF 245 (452)
T ss_dssp CCCE
T ss_pred CcCC
Confidence 6653
No 227
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=98.34 E-value=2.3e-07 Score=72.72 Aligned_cols=36 Identities=31% Similarity=0.470 Sum_probs=33.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCC--------ceEEEEecCC-CC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKE--------LKVCLVEKAA-EV 63 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g--------~~v~vlE~~~-~~ 63 (182)
..+|+|||||++||++|+.|++ .| ++|+|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~------~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR------LAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH------HHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCcccccCCCceEEEEeccCccc
Confidence 3689999999999999999998 66 9999999998 77
No 228
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.34 E-value=9.7e-06 Score=60.93 Aligned_cols=89 Identities=16% Similarity=0.134 Sum_probs=63.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.... + +
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~-------~---------~------------------- 215 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFAR------LGSKVTVLARNTLFFR-------E---------D------------------- 215 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCTTTT-------S---------C-------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH------cCCEEEEEEECCccCC-------C---------C-------------------
Confidence 479999999999999999999 8999999998753210 0 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE----EEEeCCEEEecC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK----GIATGDVGIAKD 178 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~----~v~~~~~vi~ad 178 (182)
..+.+.+.+.+++.|++++.+++|+++..+++...+ +....|.||.|.
T Consensus 216 ----------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~~~i~aD~Vv~a~ 267 (467)
T 1zk7_A 216 ----------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTTHGELRADKLLVAT 267 (467)
T ss_dssp ----------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEETTEEEEESEEEECS
T ss_pred ----------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEECCcEEEcCEEEECC
Confidence 135566777778889999999999999763322111 123346666665
Q ss_pred CC
Q psy2240 179 GS 180 (182)
Q Consensus 179 G~ 180 (182)
|.
T Consensus 268 G~ 269 (467)
T 1zk7_A 268 GR 269 (467)
T ss_dssp CE
T ss_pred CC
Confidence 53
No 229
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.34 E-value=7.1e-06 Score=62.07 Aligned_cols=89 Identities=21% Similarity=0.239 Sum_probs=64.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.....
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l~~------------------------------------ 232 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQR------KGKEVVLIDVVDTCLAG------------------------------------ 232 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSTTTT------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH------CCCeEEEEEcccchhhh------------------------------------
Confidence 479999999999999999999 89999999987643210
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE------EEeCCEEEe
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG------IATGDVGIA 176 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~------v~~~~~vi~ 176 (182)
.+ + ..+.+.+.+.+++.|++++.+++|+++.. + +.+.. ....|.||.
T Consensus 233 --------~~----------------~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~-~~v~~v~~~g~~i~~D~Vi~ 285 (490)
T 2bc0_A 233 --------YY----------------D-RDLTDLMAKNMEEHGIQLAFGETVKEVAG-N-GKVEKIITDKNEYDVDMVIL 285 (490)
T ss_dssp --------TS----------------C-HHHHHHHHHHHHTTTCEEEETCCEEEEEC-S-SSCCEEEESSCEEECSEEEE
T ss_pred --------HH----------------H-HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-C-CcEEEEEECCcEEECCEEEE
Confidence 00 0 13556667777888999999999999974 2 32211 234567776
Q ss_pred cCCC
Q psy2240 177 KDGS 180 (182)
Q Consensus 177 adG~ 180 (182)
|.|.
T Consensus 286 a~G~ 289 (490)
T 2bc0_A 286 AVGF 289 (490)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 6664
No 230
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.33 E-value=1.1e-05 Score=61.15 Aligned_cols=35 Identities=20% Similarity=0.325 Sum_probs=31.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSR------LGVIVKVFGRSGSV 209 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHH------TTCEEEEECCTTCC
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCeEEEEEECCcc
Confidence 479999999999999999999 89999999988653
No 231
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.33 E-value=1.3e-05 Score=61.19 Aligned_cols=90 Identities=16% Similarity=0.225 Sum_probs=65.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.....
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~------~G~~Vtlv~~~~~~l~~------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA------TGRRTVMLVRTEPLKLI------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCTTTTC------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCeEEEEEecCccccc------------------------------------
Confidence 579999999999999999999 89999999987642100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcE----E----E--EEeCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSV----K----G--IATGD 172 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~----~----~--v~~~~ 172 (182)
+ ...+.+.+.+.+++.|++++++++|+++..++++.+ + + ....|
T Consensus 253 ---------~-----------------~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD 306 (523)
T 1mo9_A 253 ---------K-----------------DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETD 306 (523)
T ss_dssp ---------C-----------------SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECS
T ss_pred ---------c-----------------cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcC
Confidence 0 013456677778888999999999999986445532 1 1 23456
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
.||.|.|.
T Consensus 307 ~Vv~A~G~ 314 (523)
T 1mo9_A 307 FVFLGLGE 314 (523)
T ss_dssp CEEECCCC
T ss_pred EEEECcCC
Confidence 66666664
No 232
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.32 E-value=8e-06 Score=61.77 Aligned_cols=90 Identities=24% Similarity=0.364 Sum_probs=64.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.....
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~------------------------------------ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWAR------LGAKVTVVEFLDTILGG------------------------------------ 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSSSSSSS------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCEEEEEecccccccc------------------------------------
Confidence 479999999999999999999 78999999887643210
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----------EEeCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----------IATGD 172 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----------v~~~~ 172 (182)
+ + ..+.+.+.+.+++.|++++.+++|++++.++++..+. ....|
T Consensus 237 ---------~----------------d-~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D 290 (491)
T 3urh_A 237 ---------M----------------D-GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAE 290 (491)
T ss_dssp ---------S----------------C-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEES
T ss_pred ---------C----------------C-HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcC
Confidence 0 0 1455566777788899999999999997644332221 22346
Q ss_pred EEEecCCC
Q psy2240 173 VGIAKDGS 180 (182)
Q Consensus 173 ~vi~adG~ 180 (182)
.||.|.|.
T Consensus 291 ~Vi~a~G~ 298 (491)
T 3urh_A 291 VVLIATGR 298 (491)
T ss_dssp EEEECCCC
T ss_pred EEEEeeCC
Confidence 67766664
No 233
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.32 E-value=1.5e-05 Score=60.45 Aligned_cols=90 Identities=20% Similarity=0.236 Sum_probs=64.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++|+.+..... +
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l~~-----------------------------~------ 221 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTE------LGVPVTVVASQDHVLPY-----------------------------E------ 221 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHH------TTCCEEEECSSSSSSCC-----------------------------S------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCeEEEEEcCCccccc-----------------------------c------
Confidence 479999999999999999999 89999999987643200 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE-----EEeCCEEEec
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG-----IATGDVGIAK 177 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~-----v~~~~~vi~a 177 (182)
...+.+.+.+.+++.|++|+.+++|++++.++++..+. ....|.||.|
T Consensus 222 ---------------------------d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a 274 (499)
T 1xdi_A 222 ---------------------------DADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMT 274 (499)
T ss_dssp ---------------------------SHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEEC
T ss_pred ---------------------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEEC
Confidence 01345566777788899999999999998644332221 2234566666
Q ss_pred CCC
Q psy2240 178 DGS 180 (182)
Q Consensus 178 dG~ 180 (182)
.|.
T Consensus 275 ~G~ 277 (499)
T 1xdi_A 275 IGS 277 (499)
T ss_dssp CCE
T ss_pred CCC
Confidence 553
No 234
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.29 E-value=5.2e-07 Score=69.11 Aligned_cols=37 Identities=41% Similarity=0.625 Sum_probs=33.5
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCC-CceEEEEecCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGK-ELKVCLVEKAAEV 63 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~-g~~v~vlE~~~~~ 63 (182)
..+|++|||+|++|+.+|..|++ . |.+|+|||+.+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~------~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSE------DPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTT------STTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh------CCCCCEEEEecCCcC
Confidence 46899999999999999999998 6 8999999998644
No 235
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.28 E-value=1.9e-05 Score=59.54 Aligned_cols=34 Identities=26% Similarity=0.308 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~ 219 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHG------LGSETHLVIRGET 219 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHH------TTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCceEEEEeCCc
Confidence 479999999999999999999 8999999998764
No 236
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=1e-05 Score=59.00 Aligned_cols=34 Identities=29% Similarity=0.506 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.+++|||||.+|+-+|..|++ .|.+|+++|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE------AGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH------TTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCCe
Confidence 579999999999999999999 8999999998764
No 237
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.28 E-value=2.1e-05 Score=59.61 Aligned_cols=90 Identities=16% Similarity=0.126 Sum_probs=63.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.+... +
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~l~~-----------------------------~------ 215 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKR------LGIDSYIFARGNRILRK-----------------------------F------ 215 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSSSSCTT-----------------------------S------
T ss_pred CeEEEECChHHHHHHHHHHHH------cCCeEEEEecCCccCcc-----------------------------c------
Confidence 479999999999999999998 89999999987643200 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcE-EE-----E-EeCCEEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSV-KG-----I-ATGDVGI 175 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~-~~-----v-~~~~~vi 175 (182)
+ ..+.+.+.+.+++.|++++.+++|++++.++++.+ +. . ...|.||
T Consensus 216 --------------------------d-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi 268 (500)
T 1onf_A 216 --------------------------D-ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVI 268 (500)
T ss_dssp --------------------------C-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEE
T ss_pred --------------------------c-hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEE
Confidence 0 13445566777888999999999999986443321 11 1 3446666
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 269 ~a~G~ 273 (500)
T 1onf_A 269 YCVGR 273 (500)
T ss_dssp ECCCB
T ss_pred ECCCC
Confidence 66654
No 238
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.28 E-value=2.4e-05 Score=57.80 Aligned_cols=88 Identities=20% Similarity=0.305 Sum_probs=63.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.....
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~------------------------------------ 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATART------AGVHVSLVETQPRLMSR------------------------------------ 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSSTT------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCEEEEEEeCCccccc------------------------------------
Confidence 579999999999999999999 89999999987643100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE----EEEeCCEEEecC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK----GIATGDVGIAKD 178 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~----~v~~~~~vi~ad 178 (182)
. + ...+.+.+.+.+++.|++++.+++|++++ ++ .+. .....|.||.|.
T Consensus 184 -----------~-------------~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~~--~v~~~~g~~i~~D~vi~a~ 235 (408)
T 2gqw_A 184 -----------A-------------A-PATLADFVARYHAAQGVDLRFERSVTGSV-DG--VVLLDDGTRIAADMVVVGI 235 (408)
T ss_dssp -----------T-------------S-CHHHHHHHHHHHHHTTCEEEESCCEEEEE-TT--EEEETTSCEEECSEEEECS
T ss_pred -----------c-------------c-CHHHHHHHHHHHHHcCcEEEeCCEEEEEE-CC--EEEECCCCEEEcCEEEECc
Confidence 0 0 01345566777788899999999999986 22 221 133457777666
Q ss_pred CC
Q psy2240 179 GS 180 (182)
Q Consensus 179 G~ 180 (182)
|.
T Consensus 236 G~ 237 (408)
T 2gqw_A 236 GV 237 (408)
T ss_dssp CE
T ss_pred CC
Confidence 63
No 239
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.28 E-value=1.7e-05 Score=56.30 Aligned_cols=34 Identities=24% Similarity=0.466 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSN------IASEVHLIHRRDG 179 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTT------TSSEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh------cCCeEEEEEeCCc
Confidence 479999999999999999998 7999999998753
No 240
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.26 E-value=2e-05 Score=59.30 Aligned_cols=90 Identities=23% Similarity=0.287 Sum_probs=65.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCC-CceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGK-ELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKF 101 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~-g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (182)
.+++|||+|..|+-+|..|++ . |.+|+++|+.+.....
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~------~~g~~Vtlv~~~~~~l~~----------------------------------- 198 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLAD------MWGIDTTVVELADQIMPG----------------------------------- 198 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------HHCCEEEEECSSSSSSTT-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH------hcCCcEEEEEccCccccc-----------------------------------
Confidence 479999999999999999999 7 8999999987532100
Q ss_pred HHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE------EEeCCEEE
Q psy2240 102 AYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG------IATGDVGI 175 (182)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~------v~~~~~vi 175 (182)
. . ...+.+.+.+.+++.|++++.+++|++++. +++.+.. ....|.||
T Consensus 199 ------------~-------------~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~v~~~~g~~i~aD~Vv 251 (472)
T 3iwa_A 199 ------------F-------------T-SKSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVARVITDKRTLDADLVI 251 (472)
T ss_dssp ------------T-------------S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEEEEEESSCEEECSEEE
T ss_pred ------------c-------------c-CHHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEEEEEeCCCEEEcCEEE
Confidence 0 0 024667777788889999999999999986 3333321 23457777
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 252 ~a~G~ 256 (472)
T 3iwa_A 252 LAAGV 256 (472)
T ss_dssp ECSCE
T ss_pred ECCCC
Confidence 77664
No 241
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.25 E-value=2.3e-05 Score=58.81 Aligned_cols=34 Identities=29% Similarity=0.454 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+.
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~ 205 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKN------YGVDVTIVEFLPR 205 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSS
T ss_pred CeEEEECCcHHHHHHHHHHHH------cCCeEEEEEcCCc
Confidence 479999999999999999999 8999999998764
No 242
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.25 E-value=7.9e-06 Score=61.68 Aligned_cols=71 Identities=18% Similarity=0.126 Sum_probs=55.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+..... .
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~------~G~~Vtlv~~~~~~l~~-----------------------------~------ 224 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYST------LGSRLDVVEMMDGLMQG-----------------------------A------ 224 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHH------HTCEEEEECSSSSSSTT-----------------------------S------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCeEEEEEECCccccc-----------------------------c------
Confidence 479999999999999999999 78999999987643200 0
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHG 161 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~ 161 (182)
...+.+.+.+.+++.|++++++++|++++.++
T Consensus 225 ---------------------------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~ 256 (482)
T 1ojt_A 225 ---------------------------DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE 256 (482)
T ss_dssp ---------------------------CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET
T ss_pred ---------------------------CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC
Confidence 01344566677778899999999999997643
No 243
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.23 E-value=1.3e-06 Score=64.30 Aligned_cols=35 Identities=37% Similarity=0.582 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|||||++|+++|..|.+. +++.+|+|||+++.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~----~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLA----DPSIEVTLIEPNET 38 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSCSS
T ss_pred EEEEECCcHHHHHHHHHHHhc----CcCCeEEEEeCCCC
Confidence 599999999999999999873 24579999999864
No 244
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.23 E-value=2.8e-05 Score=58.20 Aligned_cols=91 Identities=20% Similarity=0.149 Sum_probs=64.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++|+.+......
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~~----------------------------------- 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVK------MKKTVHVFESLENLLPKY----------------------------------- 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSSTTT-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCeEEEEEccCcccccc-----------------------------------
Confidence 479999999999999999999 899999999876431000
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE----EEeCCEEEecC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG----IATGDVGIAKD 178 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~----v~~~~~vi~ad 178 (182)
++ ..+.+.+.+.+++.|++++.+++|++++.++++..+. ....|.||.|.
T Consensus 187 -------------------------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~i~aD~Vv~A~ 240 (452)
T 3oc4_A 187 -------------------------FD-KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQEISCDSGIFAL 240 (452)
T ss_dssp -------------------------CC-HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSCEEEESEEEECS
T ss_pred -------------------------CC-HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCCEEEeCEEEECc
Confidence 00 1456677777888899999999999998634332111 22346666666
Q ss_pred CC
Q psy2240 179 GS 180 (182)
Q Consensus 179 G~ 180 (182)
|.
T Consensus 241 G~ 242 (452)
T 3oc4_A 241 NL 242 (452)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 245
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.23 E-value=2.9e-05 Score=58.28 Aligned_cols=89 Identities=19% Similarity=0.193 Sum_probs=64.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++++.+.....
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~------~g~~Vt~v~~~~~~l~~------------------------------------ 208 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHG------LGVKTTLIYRGKEILSR------------------------------------ 208 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSSTT------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCeEEEEEcCCccccc------------------------------------
Confidence 479999999999999999999 89999999987532100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEEE-------eCCEEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIA-------TGDVGI 175 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v~-------~~~~vi 175 (182)
+ + ..+.+.+.+.+++.|++++.+++|++++.++++.+ .+. ..|.||
T Consensus 209 ---------~----------------~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~g~i~aD~Vv 261 (463)
T 4dna_A 209 ---------F----------------D-QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRR-VATTMKHGEIVADQVM 261 (463)
T ss_dssp ---------S----------------C-HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCE-EEEESSSCEEEESEEE
T ss_pred ---------c----------------C-HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEE-EEEEcCCCeEEeCEEE
Confidence 0 0 13566777778889999999999999987545432 222 346666
Q ss_pred ecCCC
Q psy2240 176 AKDGS 180 (182)
Q Consensus 176 ~adG~ 180 (182)
.|.|.
T Consensus 262 ~a~G~ 266 (463)
T 4dna_A 262 LALGR 266 (463)
T ss_dssp ECSCE
T ss_pred EeeCc
Confidence 66553
No 246
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.22 E-value=2.6e-05 Score=59.91 Aligned_cols=34 Identities=29% Similarity=0.460 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.+++|||||..|+-+|..|++ .|.+|+++|+.+.
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHH------LGIKTTLLELADQ 185 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------cCCcEEEEEcCCc
Confidence 379999999999999999999 8999999998754
No 247
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.22 E-value=2.4e-05 Score=59.26 Aligned_cols=90 Identities=23% Similarity=0.183 Sum_probs=63.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCC---CceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhh
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGK---ELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHED 99 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~---g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
..++|||||..|+-+|..|++ . |.+|+++|+.+..... +
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~------~~~~g~~Vtlv~~~~~~l~~-----------------------------~--- 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNA------YKPPGGKVTLCYRNNLILRG-----------------------------F--- 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHH------HCCTTCEEEEEESSSSSCTT-----------------------------S---
T ss_pred CeEEEECCCHHHHHHHHHHHh------hCCCCCeEEEEEcCCccccc-----------------------------c---
Confidence 479999999999999999998 6 8999999987643200 0
Q ss_pred hHHHHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE-E-----EEeCCE
Q psy2240 100 KFAYLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK-G-----IATGDV 173 (182)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~-~-----v~~~~~ 173 (182)
+ ..+.+.+.+.+++.|++++++++|+++..++++.+. . ....|.
T Consensus 234 -----------------------------d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~ 283 (495)
T 2wpf_A 234 -----------------------------D-ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDV 283 (495)
T ss_dssp -----------------------------C-HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred -----------------------------C-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCE
Confidence 0 134456666777889999999999999864433221 1 223466
Q ss_pred EEecCCC
Q psy2240 174 GIAKDGS 180 (182)
Q Consensus 174 vi~adG~ 180 (182)
||.|.|.
T Consensus 284 vv~a~G~ 290 (495)
T 2wpf_A 284 VMMAIGR 290 (495)
T ss_dssp EEECSCE
T ss_pred EEECCCC
Confidence 6666653
No 248
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.20 E-value=1.4e-06 Score=67.34 Aligned_cols=38 Identities=32% Similarity=0.511 Sum_probs=33.4
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.++|++|||+|++|+++|..|++. .|.+|+|||++...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~-----~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTEN-----PKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTS-----TTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhC-----CCCcEEEEecCCcc
Confidence 568999999999999999999972 48999999998643
No 249
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.19 E-value=3.1e-05 Score=58.31 Aligned_cols=90 Identities=14% Similarity=0.100 Sum_probs=64.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++++.+....
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~------------------------------------- 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWAR------LGAEVTVLEAMDKFLP------------------------------------- 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSSSST-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCcEEEEecCCCcCc-------------------------------------
Confidence 479999999999999999999 8999999998653210
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEE--------EEeCCEE
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKG--------IATGDVG 174 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~--------v~~~~~v 174 (182)
.+ ...+.+.+.+.+++.|++++.+++|++++.++++..+. ....|.|
T Consensus 218 -----------~~--------------~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~v 272 (476)
T 3lad_A 218 -----------AV--------------DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKL 272 (476)
T ss_dssp -----------TS--------------CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEE
T ss_pred -----------cc--------------CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEE
Confidence 00 01355666777788899999999999998644432221 2234666
Q ss_pred EecCCC
Q psy2240 175 IAKDGS 180 (182)
Q Consensus 175 i~adG~ 180 (182)
|.|.|.
T Consensus 273 i~a~G~ 278 (476)
T 3lad_A 273 IVAVGR 278 (476)
T ss_dssp EECSCE
T ss_pred EEeeCC
Confidence 666653
No 250
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.18 E-value=2.1e-06 Score=63.91 Aligned_cols=35 Identities=37% Similarity=0.673 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|||||++|+++|..|++. +++.+|+|||+++.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~----~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNL----MPDLKITLISDRPY 38 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHH----CTTCEEEEECSSSE
T ss_pred cEEEECCCHHHHHHHHHHhcc----CcCCeEEEEcCCCC
Confidence 599999999999999999883 24589999999863
No 251
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.14 E-value=2e-06 Score=64.13 Aligned_cols=37 Identities=27% Similarity=0.532 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
+|+|||||++|+++|..|++. ++..+|+|||+++...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~----g~~~~V~lie~~~~~~ 38 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRL----DKESDIIIFEKDRDMS 38 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHH----CSSSCEEEEESSSCSS
T ss_pred eEEEECCCHHHHHHHHHHHhC----CCCCcEEEEeCCCCCC
Confidence 599999999999999999982 2336899999987543
No 252
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.11 E-value=3.4e-05 Score=59.64 Aligned_cols=89 Identities=22% Similarity=0.287 Sum_probs=63.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++|+.+.....
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~~l~~------------------------------------ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRE------RGIEVTLVEMANQVMPP------------------------------------ 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTT------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCeEEEEecCCccccc------------------------------------
Confidence 479999999999999999999 89999999987543210
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE----EEEeCCEEEecC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK----GIATGDVGIAKD 178 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~----~v~~~~~vi~ad 178 (182)
+ ...+.+.+.+.+++.|++++.+++|++++.+.+ .+. .....|.||.|.
T Consensus 226 ---------~-----------------~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~~~~g~~i~~D~Vi~a~ 278 (588)
T 3ics_A 226 ---------I-----------------DYEMAAYVHEHMKNHDVELVFEDGVDALEENGA-VVRLKSGSVIQTDMLILAI 278 (588)
T ss_dssp ---------S-----------------CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT-EEEETTSCEEECSEEEECS
T ss_pred ---------C-----------------CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC-EEEECCCCEEEcCEEEEcc
Confidence 0 013455666777788999999999999875322 221 133457777666
Q ss_pred CC
Q psy2240 179 GS 180 (182)
Q Consensus 179 G~ 180 (182)
|.
T Consensus 279 G~ 280 (588)
T 3ics_A 279 GV 280 (588)
T ss_dssp CE
T ss_pred CC
Confidence 64
No 253
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.10 E-value=5.1e-05 Score=57.27 Aligned_cols=72 Identities=18% Similarity=0.273 Sum_probs=55.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||+|..|+-+|..|++ .|.+|+++++...... ++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~l~~----------------~d------------------- 226 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKG------LGYEPTVMVRSIVLRG----------------FD------------------- 226 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSCSSTT----------------SC-------------------
T ss_pred CcEEEECCCHHHHHHHHHHHH------cCCEEEEEeCCCCCcc----------------cC-------------------
Confidence 469999999999999999999 8999999987421100 00
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG 163 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g 163 (182)
..+.+.+.+.+++.|++++.+++|++++.++++
T Consensus 227 ----------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~ 259 (483)
T 3dgh_A 227 ----------------------------QQMAELVAASMEERGIPFLRKTVPLSVEKQDDG 259 (483)
T ss_dssp ----------------------------HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTS
T ss_pred ----------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCC
Confidence 134556677778889999999999999864444
No 254
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.10 E-value=2.2e-06 Score=65.04 Aligned_cols=34 Identities=18% Similarity=0.374 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
+..|||||||++|+++|..|++ .+.+|+|||+++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~------~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDT------KKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCT------TTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhh------CCCcEEEECCCC
Confidence 3579999999999999999987 789999999986
No 255
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.09 E-value=8.1e-05 Score=56.09 Aligned_cols=73 Identities=25% Similarity=0.164 Sum_probs=56.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++++.+.....
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~~l~~------------------------------------ 225 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSA------LGSKTSLMIRHDKVLRS------------------------------------ 225 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSSSCTT------------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHH------cCCeEEEEEeCCccccc------------------------------------
Confidence 479999999999999999999 89999999987542200
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG 163 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g 163 (182)
+ ...+.+.+.+.+++.|++++.+++|++++.++++
T Consensus 226 ---------~-----------------d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~ 260 (478)
T 3dk9_A 226 ---------F-----------------DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSG 260 (478)
T ss_dssp ---------S-----------------CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSS
T ss_pred ---------c-----------------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCC
Confidence 0 0124456666777889999999999999865555
No 256
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.08 E-value=6.1e-05 Score=56.45 Aligned_cols=38 Identities=21% Similarity=0.379 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..+|+|||||.+|+-+|..|++. ..+.+|++++|.+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~----~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDS----YPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH----CTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhc----CCCCeEEEEEeCCCC
Confidence 35799999999999999999982 128899999998753
No 257
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.05 E-value=7.1e-05 Score=56.56 Aligned_cols=72 Identities=15% Similarity=0.224 Sum_probs=54.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++ .|.+|+++++......
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~l~~------------------------------------- 222 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTG------IGLDTTVMMRSIPLRG------------------------------------- 222 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCSSTT-------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCceEEEEcCccccc-------------------------------------
Confidence 369999999999999999999 8999999997531100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG 163 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g 163 (182)
+ + ..+.+.+.+.+++.|++++.++++++++..+++
T Consensus 223 ---------~----------------d-~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~ 257 (488)
T 3dgz_A 223 ---------F----------------D-QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTN 257 (488)
T ss_dssp ---------S----------------C-HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTS
T ss_pred ---------C----------------C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCC
Confidence 0 0 134556677778889999999999998764443
No 258
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.03 E-value=5.5e-05 Score=57.89 Aligned_cols=72 Identities=15% Similarity=0.167 Sum_probs=55.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-.|..+++ .|.+|+|+++......
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~------lG~~VTii~~~~~L~~------------------------------------- 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNS------LGYDVTVAVRSIVLRG------------------------------------- 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHH------HTCCEEEEESSCSSTT-------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHh------cCCeEEEecccccccc-------------------------------------
Confidence 479999999999999999999 7999999987432110
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCC
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDG 163 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g 163 (182)
+ + .++.+.+.+.+++.|++++.++.+..++..++.
T Consensus 261 ---------~----------------D-~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~ 295 (542)
T 4b1b_A 261 ---------F----------------D-QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDK 295 (542)
T ss_dssp ---------S----------------C-HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTE
T ss_pred ---------c----------------c-hhHHHHHHHHHHhhcceeecceEEEEEEecCCe
Confidence 0 0 135566677778899999999999999875443
No 259
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.02 E-value=2.5e-05 Score=56.56 Aligned_cols=34 Identities=35% Similarity=0.546 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~------~g~~V~lv~~~~~ 197 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIK------NAASVTLVHRGHE 197 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTT------TSSEEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHh------cCCEEEEEEcCCC
Confidence 479999999999999999998 7899999998754
No 260
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.00 E-value=3e-05 Score=56.85 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=32.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.+++|||||..|+-+|..|++ .|.+|+++|+.+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~------~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIID------SGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHH------HTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCeEEEEEcCCcc
Confidence 479999999999999999999 78999999998754
No 261
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.00 E-value=0.00016 Score=53.99 Aligned_cols=34 Identities=26% Similarity=0.499 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.+++|||+|..|+-+|..|++ .|.+|+++|+.+.
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAA------QGKNVTMIVRGER 182 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCeEEEEEcCCc
Confidence 379999999999999999999 8999999998764
No 262
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.97 E-value=5.7e-05 Score=53.94 Aligned_cols=34 Identities=21% Similarity=0.350 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~------~g~~v~~v~~~~~ 207 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTK------YGSKVFMLVRKDH 207 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTT------TSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------cCCEEEEEEcCCc
Confidence 469999999999999999998 7899999998754
No 263
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.97 E-value=7.2e-05 Score=53.16 Aligned_cols=33 Identities=33% Similarity=0.521 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|||+|..|+-+|..|++ .|.+|+++++.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~------~g~~V~~i~~~~ 188 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSE------YVKNVTIIEYMP 188 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTT------TBSEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHh------hCCcEEEEEcCC
Confidence 479999999999999999998 789999999865
No 264
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.90 E-value=0.00017 Score=51.01 Aligned_cols=34 Identities=29% Similarity=0.479 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLAN------ICKKVYLIHRRDG 177 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHT------TSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------cCCEEEEEeeCCc
Confidence 579999999999999999998 7899999998753
No 265
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.89 E-value=0.00015 Score=52.42 Aligned_cols=34 Identities=24% Similarity=0.472 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~------~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAK------NGSDIALYTSTTG 200 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECC---
T ss_pred CEEEEECCCcCHHHHHHHHHh------cCCeEEEEecCCC
Confidence 379999999999999999999 7999999998754
No 266
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.88 E-value=0.00018 Score=54.43 Aligned_cols=94 Identities=23% Similarity=0.258 Sum_probs=61.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCCCccccccccChhHHhhhhhhHHhcCCCCCccchhhhHH
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVGGHILSGAVIDPIALNELLPDWKDLGAPLNTPVHEDKFA 102 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (182)
..++|||||..|+-+|..|++.... .|.+|+++++.+.....
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~--~g~~V~~v~~~~~~~~~------------------------------------ 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARA--LGTEVIQLFPEKGNMGK------------------------------------ 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHH--HTCEEEEECSSSSTTTT------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhh--cCCEEEEEecCcccccc------------------------------------
Confidence 4799999999999999999873211 26789999876431100
Q ss_pred HHHhhccCCCCCCCCCCCCCCCccccchHHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEE-E-----EEeCCEEEe
Q psy2240 103 YLTKSKRIGIPILPGMPMNNHGNYVVRLGHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVK-G-----IATGDVGIA 176 (182)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~-~-----v~~~~~vi~ 176 (182)
.+ + ..+.+.+.+.+++.|++++.+++|+++..++ +.+. . ....|.||.
T Consensus 223 -----------~l-------------~-~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~-~~~~v~l~dG~~i~aD~Vv~ 276 (493)
T 1m6i_A 223 -----------IL-------------P-EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS-GKLLIKLKDGRKVETDHIVA 276 (493)
T ss_dssp -----------TS-------------C-HHHHHHHHHHHHTTTCEEECSCCEEEEEEET-TEEEEEETTSCEEEESEEEE
T ss_pred -----------cC-------------C-HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC-CeEEEEECCCCEEECCEEEE
Confidence 00 0 1344556677788899999999999997533 2221 0 223466766
Q ss_pred cCCC
Q psy2240 177 KDGS 180 (182)
Q Consensus 177 adG~ 180 (182)
|.|.
T Consensus 277 a~G~ 280 (493)
T 1m6i_A 277 AVGL 280 (493)
T ss_dssp CCCE
T ss_pred CCCC
Confidence 6663
No 267
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.87 E-value=0.00017 Score=50.88 Aligned_cols=34 Identities=26% Similarity=0.519 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~------~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLAN------ICSKIYLIHRRDE 181 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHT------TSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------hCCEEEEEEeCCC
Confidence 479999999999999999999 7899999998754
No 268
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.84 E-value=0.00016 Score=51.04 Aligned_cols=34 Identities=41% Similarity=0.563 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAG------IVEHVTLLEFAPE 178 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------TBSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHH------hCCEEEEEEeCcc
Confidence 479999999999999999998 7899999998754
No 269
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.83 E-value=0.0002 Score=54.31 Aligned_cols=27 Identities=7% Similarity=0.142 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHcCcEEecCCccceeE
Q psy2240 132 HVVKWLGEQAEAMGVEIYPGIPASEVL 158 (182)
Q Consensus 132 ~l~~~l~~~~~~~gv~i~~~~~v~~i~ 158 (182)
.+.+.+.+.+++.||+++.+++|++++
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~ 299 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVE 299 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEC
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEe
Confidence 466677778888999999999999885
No 270
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.83 E-value=0.00011 Score=54.69 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||||..|+-+|..+++ .|.+|+++|+.+.
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~ 181 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYE------RGLHPTLIHRSDK 181 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCEEEEEESSSC
T ss_pred cEEEEECCccchhhhHHHHHh------cCCcceeeeeecc
Confidence 379999999999999999999 7999999998764
No 271
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.78 E-value=0.00027 Score=53.88 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
..++|||||..|+-+|..|++ .|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~------~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAG------IGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHH------TTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHH------cCCeEEEEecc
Confidence 369999999999999999999 89999999974
No 272
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.78 E-value=0.0003 Score=50.25 Aligned_cols=34 Identities=26% Similarity=0.524 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~------~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLD------TARRITLIHRRPQ 186 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTT------TSSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------hCCEEEEEEcCCc
Confidence 479999999999999999998 7899999998753
No 273
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.69 E-value=0.0005 Score=48.90 Aligned_cols=34 Identities=24% Similarity=0.451 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~------~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTK------FADEVTVIHRRDT 186 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTT------TCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------cCCEEEEEeCCCc
Confidence 479999999999999999998 7899999998753
No 274
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.68 E-value=0.00037 Score=54.98 Aligned_cols=35 Identities=31% Similarity=0.259 Sum_probs=31.0
Q ss_pred ccEEEEC--CChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVG--GGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIG--gG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.+|+||| +|.+|+-+|..|++ .|.+|+++++.+..
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~------~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQ------KGYEVSIVTPGAQV 560 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHH------TTCEEEEEESSSST
T ss_pred CEEEEEcCCCCccHHHHHHHHHh------CCCeeEEEeccccc
Confidence 3599999 99999999999999 89999999987643
No 275
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.67 E-value=0.00022 Score=50.90 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|.+|+-+|..|++ .|.+|+++++.+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~------~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTK------YGSKVYIIHRRDA 193 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTT------TSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHh------cCCeEEEEecCCc
Confidence 479999999999999999988 7899999998754
No 276
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.66 E-value=8.4e-05 Score=47.26 Aligned_cols=35 Identities=26% Similarity=0.232 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|+|+|..|..+|..|.+ .|.+|+++|+++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~------~g~~V~vid~~~~ 53 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASS------SGHSVVVVDKNEY 53 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCGG
T ss_pred CCcEEEECCCHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 3479999999999999999998 8999999998764
No 277
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.57 E-value=0.0011 Score=49.82 Aligned_cols=34 Identities=24% Similarity=0.424 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||||..|+-+|..|++ .|.+|+++++.+.
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~------~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRL------MGVQTHIIEMLDR 206 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHH------cCCEEEEEEeCCc
Confidence 469999999999999999999 8999999998764
No 278
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.57 E-value=0.00013 Score=45.58 Aligned_cols=35 Identities=17% Similarity=0.358 Sum_probs=31.6
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.-.|+|||.|..|..+|..|.+ .|.+|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~------~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLA------SDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH------TTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHH------CCCCEEEEECCHH
Confidence 3469999999999999999999 8999999999863
No 279
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.53 E-value=0.00094 Score=47.44 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~------~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEP------IAKEVSIIHRRDK 188 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTT------TBSEEEEECSSSS
T ss_pred CEEEEECCCHhHHHHHHHHHh------hCCeEEEEEecCc
Confidence 479999999999999999998 7889999998754
No 280
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.49 E-value=0.00012 Score=51.96 Aligned_cols=36 Identities=22% Similarity=0.405 Sum_probs=32.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
..++|||||..|+-+|..|++ .|.+|+|+|+.+...
T Consensus 146 k~vvViGgG~ig~E~A~~l~~------~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTK------FADKVTIVHRRDELR 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTT------TCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHh------cCCEEEEEecccccC
Confidence 479999999999999999998 799999999987543
No 281
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=97.41 E-value=0.00041 Score=51.87 Aligned_cols=34 Identities=32% Similarity=0.511 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|..+|..|++ .|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~------aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGL------AGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCeEEEEECcHH
Confidence 469999999999999999999 8999999998865
No 282
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.40 E-value=0.00031 Score=44.46 Aligned_cols=33 Identities=12% Similarity=0.320 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|+|+|..|...|..|.+ .|.+|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~------~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQ------RGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHH------TTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHH------CCCCEEEEECCC
Confidence 469999999999999999998 899999999974
No 283
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.39 E-value=0.00024 Score=44.02 Aligned_cols=32 Identities=25% Similarity=0.399 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|||+|..|..+|..|.+ .|.+|+++|+++
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~------~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSE------KGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 59999999999999999998 899999999864
No 284
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.38 E-value=0.00023 Score=44.38 Aligned_cols=32 Identities=25% Similarity=0.417 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.++|+|+|..|..+|..|.+ .|.+|+++|+++
T Consensus 8 ~v~I~G~G~iG~~la~~L~~------~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTA------AGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHH------TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCeEEEEECCH
Confidence 69999999999999999999 899999999875
No 285
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.37 E-value=0.0019 Score=45.58 Aligned_cols=35 Identities=26% Similarity=0.398 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...++|||+|..|+-+|..|++ .|.+|+++++.+.
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~------~g~~v~~~~~~~~ 188 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSS------YSTKVYLIHRRDT 188 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------HSSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH------hCCeEEEEEeCCC
Confidence 3579999999999999999999 7899999998754
No 286
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=97.30 E-value=0.00024 Score=50.64 Aligned_cols=33 Identities=30% Similarity=0.438 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||+|..|...|..+++ .|++|+++|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~------~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 469999999999999999999 899999999875
No 287
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.28 E-value=0.00028 Score=49.87 Aligned_cols=35 Identities=29% Similarity=0.493 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..++|||||..|+-+|..|++ .|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~------~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTK------YGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTT------TSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHH------hCCeeeeecccccc
Confidence 479999999999999999999 89999999987643
No 288
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=97.23 E-value=0.00052 Score=48.13 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|..+|..|++ .|++|+++|+++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~------~G~~V~l~d~~~~ 38 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF------HGFAVTAYDINTD 38 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSHH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCeEEEEeCCHH
Confidence 369999999999999999999 8999999998753
No 289
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.19 E-value=0.00064 Score=40.67 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~ 61 (182)
.|+|+|+|..|..++..|.+ .| .+|+++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~------~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKT------SSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHH------CSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHh------CCCceEEEEeCCH
Confidence 59999999999999999999 88 8999999864
No 290
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=97.16 E-value=0.0007 Score=47.90 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||+|..|..+|..|++ .|++|+++|+++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~------~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAA------TGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 59999999999999999999 899999999875
No 291
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.13 E-value=0.00041 Score=45.27 Aligned_cols=33 Identities=27% Similarity=0.273 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCC-CceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGK-ELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~-g~~v~vlE~~~ 61 (182)
-.|+|||+|..|..+|..|.+ . |.+|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~------~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRA------RYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHH------HHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHh------ccCCeEEEEECCH
Confidence 369999999999999999998 7 89999999875
No 292
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.02 E-value=0.00084 Score=41.65 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|+|+|..|..+|..|.+ .|.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~------~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHR------MGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHH------TTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 59999999999999999998 789999999864
No 293
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.02 E-value=0.00098 Score=47.58 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|||+|..|.+.|..|++ .|.+|++++|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~------~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAK------TGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHH------TTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCh
Confidence 69999999999999999999 899999999875
No 294
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.96 E-value=0.00073 Score=45.40 Aligned_cols=33 Identities=24% Similarity=0.442 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|||+|..|..+|..|.+ .|.+|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~------~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS------RKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH------TTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCeEEEEECCHH
Confidence 48999999999999999999 8999999998763
No 295
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.89 E-value=0.0011 Score=47.18 Aligned_cols=32 Identities=22% Similarity=0.361 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|||+|..|.+.|..|++ .|.+|++++|++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~------~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQR------SGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHH------TSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHH------CCCeEEEEEcCc
Confidence 69999999999999999999 899999999875
No 296
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.89 E-value=0.001 Score=47.45 Aligned_cols=34 Identities=29% Similarity=0.430 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|.+.|..|++ .|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~------~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFAS------GGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 369999999999999999999 8999999998753
No 297
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.86 E-value=0.0015 Score=46.60 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..|.|||+|..|.++|..|++ .|+ +|+++|+.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~------~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGK------DNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCceEEEEeCCc
Confidence 369999999999999999998 787 999999875
No 298
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.84 E-value=0.0013 Score=49.49 Aligned_cols=35 Identities=11% Similarity=0.028 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..|+|||+|.+|+-+|..|++ .|.+|+++++.+.+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~------~g~~V~li~~~~~~ 232 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYK------YGAKKLISCYRTAP 232 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHH------TTCSEEEEECSSCC
T ss_pred CEEEEEcCCCCHHHHHHHHHH------hCCeEEEEEECCCC
Confidence 479999999999999999999 78999999987643
No 299
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.84 E-value=0.0016 Score=47.03 Aligned_cols=33 Identities=27% Similarity=0.212 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||+|..|...|..|++ .|.+|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~------~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL------KGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 369999999999999999999 899999999874
No 300
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=96.81 E-value=0.002 Score=45.10 Aligned_cols=33 Identities=15% Similarity=0.163 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||+|..|...|..|++ .|.+|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK------QGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHh------CCCCEEEEEcCcc
Confidence 48999999999999999999 8999999998764
No 301
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.81 E-value=0.0019 Score=46.34 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..|+|||+|-.|.++|..|++ .|+ +|+++|+..
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~------~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCAL------RELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCh
Confidence 369999999999999999998 677 999999875
No 302
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=96.79 E-value=0.0023 Score=42.76 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|.+.|..|++ .|.+|+++++.+.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~------~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEI------AGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 369999999999999999999 8999999998764
No 303
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.77 E-value=0.0016 Score=46.52 Aligned_cols=35 Identities=31% Similarity=0.514 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..|+|||+|.+|+-+|..|++ .|.+|+++++.+..
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~------~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTR------FARSVTLVHRRDEF 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTT------TCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHH------hCCeEEEEEcCCcC
Confidence 479999999999999999998 78999999988654
No 304
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.76 E-value=0.0019 Score=46.37 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
.|+|||+|..|.+.|..|++ .|.+|++++|.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~------~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLAL------AGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHH------TTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHH------CCCEEEEEECh
Confidence 69999999999999999999 89999999985
No 305
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.76 E-value=0.0024 Score=45.35 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||.|..|...|..|++ .|++|+++++.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~------~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLK------NGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHH------CCCeEEEEeCCHH
Confidence 369999999999999999999 8999999999864
No 306
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.76 E-value=0.0026 Score=45.44 Aligned_cols=33 Identities=36% Similarity=0.489 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..|+|||+|-.|..+|..|+. .|+ +|+++|...
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~------~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ------KNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCeEEEEeCCH
Confidence 369999999999999999999 787 899999875
No 307
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.75 E-value=0.0024 Score=46.95 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.+.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~------lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR------LGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 4579999999999999999988 7999999999864
No 308
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.73 E-value=0.0015 Score=48.79 Aligned_cols=34 Identities=15% Similarity=0.183 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCce-EEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELK-VCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~-v~vlE~~~~ 62 (182)
.+|+|||+|.+|+-+|..|++ .+.+ |+++++.+.
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~------~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTP------VAKHPIYQSLLGGG 247 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTT------TSCSSEEEECTTCC
T ss_pred CEEEEEccCcCHHHHHHHHHH------HhCCcEEEEeCCCC
Confidence 479999999999999999998 7888 999998763
No 309
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.72 E-value=0.0019 Score=50.06 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
-.++|||||.+|+-+|..|++ .|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~------~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLAS------LGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHH------TTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHH------cCCEEEEEECC
Confidence 369999999999999999999 89999999987
No 310
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.71 E-value=0.0017 Score=49.80 Aligned_cols=34 Identities=15% Similarity=0.291 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.+|+|||+|.+|+-+|..|++ .+.+|++++|.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~------~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAP------EVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTT------TCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHh------hCCEEEEEECCCC
Confidence 479999999999999999998 7899999999875
No 311
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.70 E-value=0.0026 Score=47.55 Aligned_cols=35 Identities=20% Similarity=0.351 Sum_probs=32.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
+..+.|||.|..|+.+|..|++ .|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~------~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSD------FGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 4579999999999999999999 8999999999875
No 312
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.70 E-value=0.0015 Score=46.14 Aligned_cols=36 Identities=19% Similarity=0.183 Sum_probs=32.3
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
...|.|||.|..|...|..|++ .|++|+++++++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~------~G~~V~~~dr~~~~ 50 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE------WPGGVTVYDIRIEA 50 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT------STTCEEEECSSTTT
T ss_pred CCeEEEECcCHHHHHHHHHHHH------CCCeEEEEeCCHHH
Confidence 3479999999999999999999 89999999998754
No 313
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.69 E-value=0.0023 Score=48.27 Aligned_cols=33 Identities=18% Similarity=0.362 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||.|..|+.+|..|++ .|.+|+++|+++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~------~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLAD------IGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 469999999999999999999 899999999875
No 314
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.68 E-value=0.012 Score=46.41 Aligned_cols=27 Identities=30% Similarity=0.421 Sum_probs=23.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEE
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVC 55 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~ 55 (182)
..|+|||||.+|+-+|..|++ .|.+|+
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~------~G~~vt 521 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQ------PGESTS 521 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTC------CSSCGG
T ss_pred CeEEEECCChhHHHHHHHHHh------cCCCcc
Confidence 479999999999999999988 676554
No 315
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.68 E-value=0.0025 Score=45.39 Aligned_cols=32 Identities=22% Similarity=0.469 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
.|+|||+|..|..+|..|++ .|. +|+++|+..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~------~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQ------RGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 69999999999999999999 788 999999874
No 316
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.66 E-value=0.0016 Score=49.96 Aligned_cols=34 Identities=12% Similarity=0.283 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.+|+|||+|.+|+-+|..|++ .+.+|++++|.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~------~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAE------TAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTT------TBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHh------hCCEEEEEEcCCC
Confidence 479999999999999999998 7899999999875
No 317
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=96.65 E-value=0.0023 Score=48.20 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=31.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCC-Cc-eEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGK-EL-KVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~-g~-~v~vlE~~~~ 62 (182)
..|.|||.|..|+.+|..|++ . |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~------~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFAD------APCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHH------STTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHH------hCCCCeEEEEECChh
Confidence 369999999999999999999 8 99 9999999876
No 318
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=96.64 E-value=0.0031 Score=45.21 Aligned_cols=33 Identities=30% Similarity=0.522 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..|.|||+|..|.++|..|++ .|+ +|+++|...
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~------~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQ------KDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECCH
Confidence 369999999999999999999 788 999999875
No 319
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.62 E-value=0.0016 Score=45.86 Aligned_cols=32 Identities=31% Similarity=0.469 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|||+|..|.+.|..|++ .|.+|++++|++
T Consensus 4 kI~iiGaGa~G~~~a~~L~~------~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQ------SLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHH------HCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCeEEEEEecc
Confidence 69999999999999999998 788999999874
No 320
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.62 E-value=0.0025 Score=45.10 Aligned_cols=34 Identities=29% Similarity=0.252 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||.|..|...|..|++ .|.+|+++++.+.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLR------AGLSTWGADLNPQ 41 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred CeEEEECCCHHHHHHHHHHHH------CCCeEEEEECCHH
Confidence 369999999999999999999 8999999998753
No 321
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.62 E-value=0.0021 Score=43.34 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
...|+|||||.+|...+..|.+ .|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~------~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ------EGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG------GCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEECCC
Confidence 3479999999999999999999 79999999864
No 322
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.62 E-value=0.0019 Score=49.60 Aligned_cols=34 Identities=15% Similarity=0.388 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|.+|+-+|..|++ .+.+|++++|.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~------~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAE------QAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHh------hCCEEEEEECCCC
Confidence 479999999999999999999 6889999999875
No 323
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.62 E-value=0.0023 Score=43.99 Aligned_cols=34 Identities=29% Similarity=0.358 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
...|+|||+|-.|..+|..|++ .|. +++++|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~------~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS------AGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH------HTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHH------cCCCeEEEEcCCC
Confidence 3579999999999999999999 787 899999886
No 324
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=96.61 E-value=0.0018 Score=47.03 Aligned_cols=32 Identities=31% Similarity=0.485 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||+|..|.+.|..|++ .|.+|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~------~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK------KCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT------TEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 69999999999999999998 899999999874
No 325
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=96.60 E-value=0.0025 Score=47.93 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||+|..|..+|..|++ .|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~------~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFAR------VGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHh------CCCeEEEEECCH
Confidence 369999999999999999999 899999999875
No 326
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.60 E-value=0.0031 Score=44.60 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||+|..|...|..|++ .|.+|+++++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQ------GGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHh------CCCcEEEEECCH
Confidence 59999999999999999999 899999999864
No 327
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.59 E-value=0.0015 Score=45.53 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|||||-+|...+..|.+ .|.+|+|++...
T Consensus 14 k~VLVVGgG~va~rka~~Ll~------~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMP------TGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGG------GTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHh------CCCEEEEEcCCC
Confidence 469999999999999999999 899999998754
No 328
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.57 E-value=0.0026 Score=46.39 Aligned_cols=35 Identities=26% Similarity=0.275 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|||+|.+|+.+|..|.. .|.+|+++|+.+.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~------lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKR------LGAKTTGYDVRPE 218 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH------HTCEEEEECSSGG
T ss_pred CCEEEEECchHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 3579999999999999999988 6899999998864
No 329
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=96.55 E-value=0.0035 Score=44.97 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=30.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
+..|.|||+|..|...|..|++ .|.+|++++|.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~------~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHE------NGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHh------CCCeEEEEeCCH
Confidence 4579999999999999999999 899999999864
No 330
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=96.55 E-value=0.0032 Score=47.14 Aligned_cols=33 Identities=21% Similarity=0.364 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|..|+.+|..|++ .|.+|+++|+++.
T Consensus 4 kI~VIG~G~vG~~lA~~La~------~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAE------LGANVRCIDTDRN 36 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred EEEEECcCHHHHHHHHHHHh------cCCEEEEEECCHH
Confidence 59999999999999999999 8999999998753
No 331
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.55 E-value=0.0025 Score=48.65 Aligned_cols=35 Identities=40% Similarity=0.563 Sum_probs=31.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.+|+|||||.+|+-+|..|++ .|.+|+++++.+..
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~------~g~~Vtlv~~~~~l 390 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAG------IVEHVTLLEFAPEM 390 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------HBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHh------hCCEEEEEEeCccc
Confidence 479999999999999999999 68999999987654
No 332
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.54 E-value=0.0037 Score=44.30 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||.|..|...|..|++ .|++|+++++.+.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~------~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLK------QGKRVAIWNRSPG 43 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSHH
T ss_pred CeEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 469999999999999999999 8999999998763
No 333
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=96.53 E-value=0.0037 Score=44.31 Aligned_cols=32 Identities=31% Similarity=0.444 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
.|+|||+|..|.++|..|+. .|+ +|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~------~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL------RGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCH
Confidence 58999999999999999998 788 999999874
No 334
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.51 E-value=0.0031 Score=45.74 Aligned_cols=36 Identities=14% Similarity=0.257 Sum_probs=31.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
....|.|||.|..|...|..|++ .|.+|+++++.+.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~------~G~~V~v~dr~~~ 56 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRK------GGHECVVYDLNVN 56 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred cCCEEEEECchHHHHHHHHHHHh------CCCEEEEEeCCHH
Confidence 34579999999999999999999 8999999998753
No 335
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=96.47 E-value=0.003 Score=45.77 Aligned_cols=33 Identities=33% Similarity=0.398 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||+|..|.+.|..|++ .|.+|+++++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~------~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLAR------KGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHT------TTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHH------CCCeEEEEeCCH
Confidence 479999999999999999999 899999999874
No 336
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.47 E-value=0.0034 Score=47.02 Aligned_cols=33 Identities=24% Similarity=0.236 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||.|.+|+++|..|.+ .|.+|++.|+.+
T Consensus 10 k~v~viG~G~sG~s~A~~l~~------~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAK------LGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHH------TTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHh------CCCEEEEEeCCc
Confidence 469999999999999999999 899999999854
No 337
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.45 E-value=0.0025 Score=42.88 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEE-EecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCL-VEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~v-lE~~~~ 62 (182)
..|.|||+|-.|.+.|..|++ .|.+|++ ++|++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~------~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTA------AQIPAIIANSRGPA 58 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHH------TTCCEEEECTTCGG
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCEEEEEECCCHH
Confidence 469999999999999999999 8899999 888754
No 338
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.44 E-value=0.005 Score=43.85 Aligned_cols=32 Identities=41% Similarity=0.592 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~ 60 (182)
..|.|||+|..|.++|+.|++ .|+ +|+++|..
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~------~g~~~v~l~D~~ 41 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQ------KELADVVLVDIP 41 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCeEEEEecc
Confidence 479999999999999999999 788 99999987
No 339
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=96.44 E-value=0.0028 Score=47.30 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.|+|||.|.+|+++|..|++ +|.+|++.|.....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~------~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLA------RGVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHT------TTCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHh------CCCEEEEEECCCCc
Confidence 59999999999999999988 89999999987643
No 340
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.43 E-value=0.0032 Score=44.89 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||.|..|...|..|++ .|.+|+++++.+.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~~ 65 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCE------AGYALQVWNRTPA 65 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred CEEEEECccHHHHHHHHHHHh------CCCeEEEEcCCHH
Confidence 369999999999999999999 8999999998853
No 341
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=96.42 E-value=0.0054 Score=43.57 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|||+|..|.++|..|++. +.|.+|+++|+.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChh
Confidence 489999999999999999981 12689999998753
No 342
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.41 E-value=0.006 Score=43.62 Aligned_cols=34 Identities=29% Similarity=0.367 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
..|.|||+|..|.++|..|+. .|+ +++++|..+.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~------~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGL------KELGDVVLFDIAEG 42 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCeEEEEeCCch
Confidence 469999999999999999998 677 9999998753
No 343
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=96.39 E-value=0.0048 Score=45.94 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=31.6
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
....|+|||.|-.|+.+|..|++ .|++|+.+|-++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~------~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFAL------LGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH------HTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHh------CCCcEEEEECCH
Confidence 34679999999999999999999 799999999875
No 344
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.38 E-value=0.0048 Score=43.21 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|..|...|..|++ .|++|+++++++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~------~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVK------AGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHH------CCCeEEEEcCCHH
Confidence 59999999999999999999 8999999999864
No 345
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=96.38 E-value=0.0041 Score=45.36 Aligned_cols=35 Identities=34% Similarity=0.560 Sum_probs=31.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
.+..|+|+|+|.+|+.+|..|.. .|. +|+++|+..
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~------~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLA------AGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH------HTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHH------cCCCeEEEEECCC
Confidence 34689999999999999999988 688 999999974
No 346
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=96.38 E-value=0.0044 Score=46.82 Aligned_cols=34 Identities=26% Similarity=0.357 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|..+|..|++ .|++|+++|+++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~------aG~~V~l~D~~~e 39 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAAS------HGHQVLLYDISAE 39 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHH------TTCCEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHH------CCCeEEEEECCHH
Confidence 369999999999999999999 8999999998753
No 347
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.38 E-value=0.0048 Score=42.23 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|.|||.|-.|.+.|..|++ .|.+|++++|.+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~------~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALAD------LGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHH------CCCEEEEEeCChh
Confidence 3469999999999999999999 8999999998764
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.37 E-value=0.0039 Score=46.14 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|||.|-.|..+|..|.+ .|++|++||+++
T Consensus 6 ~viIiG~Gr~G~~va~~L~~------~g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLS------SGVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHH------TTCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 59999999999999999999 899999999985
No 349
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.37 E-value=0.0051 Score=43.84 Aligned_cols=32 Identities=25% Similarity=0.319 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|||+|..|.+.|..|++ .|.+|+++ +++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~------~G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLAR------AGHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHH------TTCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHH------CCCeEEEE-EcH
Confidence 469999999999999999999 89999999 654
No 350
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=96.33 E-value=0.0019 Score=48.52 Aligned_cols=32 Identities=25% Similarity=0.464 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|+|+|-.|..+|..|.. .|.+|++||+++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~------~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVG------ENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCS------TTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCCEEEEECCH
Confidence 49999999999999999988 899999999986
No 351
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.31 E-value=0.0054 Score=45.21 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|||+|.+|+.++..+.. .|.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~------~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS------LGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEcCCHH
Confidence 3479999999999999998887 7999999998764
No 352
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.31 E-value=0.0044 Score=46.21 Aligned_cols=32 Identities=25% Similarity=0.247 Sum_probs=29.7
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||.|..|+.+|..|++ .|.+|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~------~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA------RGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH------TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCEEEEEECCH
Confidence 48999999999999999999 899999999875
No 353
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.30 E-value=0.0056 Score=45.91 Aligned_cols=34 Identities=21% Similarity=0.316 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
.+|+|||||.+|+-+|..+.+ .|. +|+++++.+.
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r------~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIR------QGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHH------TTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHH------cCCCEEEEEEeCCc
Confidence 479999999999999999998 777 5999998764
No 354
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.27 E-value=0.0082 Score=42.85 Aligned_cols=34 Identities=29% Similarity=0.350 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
..|.|||+|..|.++|..|++ .++ +++++|..+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~------~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALI------KQLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCceEEEEeCChH
Confidence 469999999999999999998 666 9999998753
No 355
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=96.25 E-value=0.0019 Score=40.39 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=30.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|||+|..|...+..|.+ .|.+|+++++.+.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~------~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSY------PQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCT------TTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCEEEEEcCCHH
Confidence 3469999999999999999987 7889999998753
No 356
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=96.25 E-value=0.0062 Score=42.81 Aligned_cols=35 Identities=29% Similarity=0.312 Sum_probs=30.9
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
....|+|||+|-.|+.+|..|++ .|+ +++|+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~------aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTR------CGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHH------HTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHH------cCCCEEEEECCCc
Confidence 34689999999999999999999 675 899999876
No 357
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.24 E-value=0.0075 Score=42.83 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=30.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|...|..|++ .|.+|+++++.+.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~------~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLK------MGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHH------TTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHh------CCCEEEEEeCCHH
Confidence 469999999999999999998 7899999998754
No 358
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=96.24 E-value=0.0071 Score=44.29 Aligned_cols=35 Identities=29% Similarity=0.295 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|+|+|.+|+.++..+.. .|.+|+++|+.+.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~------~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKR------LGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 3579999999999999998887 7899999998764
No 359
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.22 E-value=0.0072 Score=43.89 Aligned_cols=33 Identities=30% Similarity=0.370 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|+|+|.+|..++..|.. .|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~------~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG------LGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 579999999999999999988 789999999875
No 360
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.007 Score=45.89 Aligned_cols=35 Identities=17% Similarity=0.320 Sum_probs=31.9
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|.|||.|..|...|..|++ +|++|++++|.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~------~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAAD------HGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 4579999999999999999999 8999999998763
No 361
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.20 E-value=0.0086 Score=40.46 Aligned_cols=34 Identities=24% Similarity=0.286 Sum_probs=30.4
Q ss_pred ccEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|.|| |..|..++..|.+ .|.+|+++.|.+.
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~------~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKN------KGHEPVAMVRNEE 56 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH------TTCEEEEEESSGG
T ss_pred CeEEEECCCChHHHHHHHHHHh------CCCeEEEEECChH
Confidence 35999998 9999999999999 8999999998754
No 362
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.19 E-value=0.0089 Score=42.43 Aligned_cols=32 Identities=31% Similarity=0.511 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
.|+|||+|-.|..+|..|+. .|. +|+++|...
T Consensus 4 kI~VIGaG~vG~~~a~~la~------~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAA------KELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCCeEEEEeCCc
Confidence 69999999999999999998 776 899999764
No 363
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.19 E-value=0.0064 Score=45.64 Aligned_cols=41 Identities=20% Similarity=0.303 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhh--------------cCCCc-eEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEK--------------DGKEL-KVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~--------------~~~g~-~v~vlE~~~~~ 63 (182)
..++|||+|.+|+-+|..|++..++ +..|. +|+|++|....
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~ 201 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL 201 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChH
Confidence 4799999999999999999820000 00576 79999987643
No 364
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.18 E-value=0.0065 Score=43.76 Aligned_cols=33 Identities=21% Similarity=0.174 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||.|..|.+.|..|.+ .|.+|+++++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~------~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHA------ANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHH------TTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 369999999999999999999 899999999885
No 365
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=96.15 E-value=0.0052 Score=46.37 Aligned_cols=36 Identities=17% Similarity=0.336 Sum_probs=31.7
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.+.+|.|||.|..|...|..|++ .|.+|++++|.+.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~------~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIES------RGYTVSIFNRSRE 49 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHT------TTCCEEEECSSHH
T ss_pred CCCeEEEEccHHHHHHHHHHHHh------CCCeEEEEeCCHH
Confidence 34579999999999999999999 8999999998753
No 366
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=96.14 E-value=0.0066 Score=44.23 Aligned_cols=34 Identities=26% Similarity=0.332 Sum_probs=30.3
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKA 60 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~ 60 (182)
.+..|+|+|+|.+|..+|..|.. .|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~------~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLD------LGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH------HTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHh------CCCCeEEEEECC
Confidence 34689999999999999999988 677 89999997
No 367
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.13 E-value=0.0055 Score=43.77 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEec
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEK 59 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~ 59 (182)
.|.|||+|..|...|..|++ .|.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~------~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVD------NGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHH------HCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh------CCCeEEEEEc
Confidence 48999999999999999998 7899999998
No 368
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=96.12 E-value=0.0081 Score=42.88 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCC----ceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKE----LKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g----~~v~vlE~~~~ 62 (182)
..|.|||+|..|.+.|..|.+ .| .+|++++|.+.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~------~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTA------AGVLAAHKIMASSPDMD 60 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHH------TTSSCGGGEEEECSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCCCcceEEEECCCcc
Confidence 369999999999999999998 78 79999998753
No 369
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=96.11 E-value=0.01 Score=43.01 Aligned_cols=34 Identities=35% Similarity=0.539 Sum_probs=30.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.|+|+|||..|..+++.+.+ .|++|+++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~------~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKK------AGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCCCC
Confidence 49999999999999999988 89999999987653
No 370
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.11 E-value=0.0095 Score=39.90 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||+|..|...|..|++ .|.+|++++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~------~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVG------SGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHH------TTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 369999999999999999998 789999999875
No 371
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.10 E-value=0.0059 Score=42.98 Aligned_cols=33 Identities=21% Similarity=0.314 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|.|||+|..|...|..|++ .|.+|+++++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK------EGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHH------CCCeEEEEeCCH
Confidence 369999999999999999998 789999999875
No 372
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.08 E-value=0.0049 Score=42.97 Aligned_cols=33 Identities=9% Similarity=0.219 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||+|.+|+-+|..|++ .| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~------~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPD------WG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGG------TS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhh------cC-cEEEEECCCC
Confidence 479999999999999999998 78 9999998764
No 373
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.08 E-value=0.005 Score=43.15 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=30.5
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|..|...|..|++ .|++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~------~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVR------AGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHH------HTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHH------CCCeEEEEcCCHH
Confidence 59999999999999999999 7899999999865
No 374
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.06 E-value=0.0099 Score=42.66 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
...|+|||+|-.|+.+|..|++ .|. +++++|.+..
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~------aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIA------WGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHH------cCCCEEEEecCCEe
Confidence 4679999999999999999999 786 7999998763
No 375
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.06 E-value=0.0068 Score=43.23 Aligned_cols=32 Identities=28% Similarity=0.427 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
.|.|||+|-.|.++|..|++ .|. +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~------~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLM------KGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCCCeEEEEeCCh
Confidence 48999999999999999998 677 999999874
No 376
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.05 E-value=0.006 Score=45.91 Aligned_cols=32 Identities=19% Similarity=0.388 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCC--CceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGK--ELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~--g~~v~vlE~~~ 61 (182)
.|.|||.|..|+..|..|++ . |.+|+++|+++
T Consensus 7 kI~VIG~G~mG~~lA~~La~------~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 7 KICCIGAGYVGGPTCSVIAH------MCPEIRVTVVDVNE 40 (467)
T ss_dssp EEEEECCSTTHHHHHHHHHH------HCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHh------cCCCCEEEEEECCH
Confidence 69999999999999999998 5 79999999875
No 377
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.05 E-value=0.011 Score=40.98 Aligned_cols=34 Identities=26% Similarity=0.521 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..++|||+|-+|.+++..|++ .|.+|+|+.|...
T Consensus 119 k~vlvlGaGGaaraia~~L~~------~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKK------QGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 469999999999999999999 7899999998864
No 378
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.01 E-value=0.011 Score=41.16 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|+|+|.+|.++|..|++ .|.+|++++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~------~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLS------LDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHH------cCCEEEEEECCH
Confidence 469999999999999999999 889999998874
No 379
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.01 E-value=0.01 Score=43.21 Aligned_cols=33 Identities=33% Similarity=0.432 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|+|+|..|..+|..|.. .|.+|+++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~------~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALG------MGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 469999999999999999988 899999999875
No 380
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=96.01 E-value=0.0082 Score=42.77 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~ 61 (182)
..|.|||.|..|...|..|++ .| .+|+++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~------~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGG------RNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------TTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHH------cCCCeEEEEeCCC
Confidence 369999999999999999999 89 9999999986
No 381
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=96.01 E-value=0.0072 Score=47.99 Aligned_cols=34 Identities=32% Similarity=0.410 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|..+|..|++ .|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~------aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL------SNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT------TTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHh------CCCEEEEEECCHH
Confidence 369999999999999999999 8999999998753
No 382
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=96.00 E-value=0.0064 Score=43.06 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCC-----C-ceEEEEec
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGK-----E-LKVCLVEK 59 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~-----g-~~v~vlE~ 59 (182)
.|.|||+|..|...|..|++ . | .+|++++|
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~------~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLAL------RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh------CccccCCCCCEEEEEc
Confidence 59999999999999999998 7 8 89999988
No 383
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=96.00 E-value=0.0056 Score=44.17 Aligned_cols=33 Identities=27% Similarity=0.270 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCC-------ceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKE-------LKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-------~~v~vlE~~~~ 62 (182)
.|.|||+|..|.+.|..|++ .| .+|+++++++.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~------~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGG------NAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHh------cCCcccCCCCeEEEEEcChh
Confidence 69999999999999999998 67 89999998765
No 384
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=95.99 E-value=0.011 Score=44.65 Aligned_cols=34 Identities=18% Similarity=0.449 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.+|.|||.|..|...|..|++ .|++|+++++.+.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~------~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMND------HGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 369999999999999999999 8999999999864
No 385
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.98 E-value=0.0098 Score=42.33 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|.|||.|..|.+.|..|.+ .|. +|+++++.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~------~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRR------SGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHH------TTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHh------CCCCCEEEEEECCH
Confidence 469999999999999999999 788 999999875
No 386
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=95.97 E-value=0.0094 Score=41.64 Aligned_cols=54 Identities=17% Similarity=0.116 Sum_probs=29.1
Q ss_pred CCcCCCCCCCccccccccccccccEEEECC---ChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 1 MLSFGSSKSDQFDVDMERFEDVADVVIVGG---GPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~dv~IIGg---G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
|+++.+..+......|..+ ...-++|.|| |-.|..+|..|++ .|.+|+++.|..
T Consensus 1 m~r~~~~~~~~~~~~m~~l-~~k~vlVTGas~~~gIG~~ia~~l~~------~G~~V~~~~r~~ 57 (285)
T 2p91_A 1 MLRKLSKFSNKGEVFMGLL-EGKRALITGVANERSIAYGIAKSFHR------EGAQLAFTYATP 57 (285)
T ss_dssp ----------------CTT-TTCEEEECCCSSTTSHHHHHHHHHHH------TTCEEEEEESSG
T ss_pred CcccccccccCCcchhhcc-CCCEEEEECCCCCCcHHHHHHHHHHH------cCCEEEEEeCCH
Confidence 5555555444333322211 1234888897 4779999999999 899999998875
No 387
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=95.95 E-value=0.009 Score=42.12 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=30.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|..|...|..|++ .|++|+++++.+.
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~------~G~~V~~~d~~~~ 37 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLK------AGYLLNVFDLVQS 37 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHH------TTCEEEEECSSHH
T ss_pred EEEEEeecHHHHHHHHHHHh------CCCeEEEEcCCHH
Confidence 59999999999999999999 8999999998753
No 388
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.95 E-value=0.0083 Score=42.62 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~ 60 (182)
..|.|||.|..|...|..|++ .|. +|+++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~------~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQ------AGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHH------CCCCeEEEEcCC
Confidence 469999999999999999999 788 99999996
No 389
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=95.93 E-value=0.0099 Score=41.92 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.1
Q ss_pred cEEEEC-CChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVG-GGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIG-gG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.||| .|..|.+.|..|++ .|.+|+++++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~------~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRA------SGYPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHT------TTCCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHh------CCCeEEEEECCcc
Confidence 599999 99999999999998 8999999998753
No 390
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.92 E-value=0.012 Score=39.16 Aligned_cols=32 Identities=22% Similarity=0.377 Sum_probs=29.1
Q ss_pred cEEEEC-CChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVG-GGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIG-gG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+||| +|-.|...|..|++ .|.+|++++|.+
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~------~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT------LGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT------TTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 489999 99999999999998 789999999874
No 391
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=95.90 E-value=0.012 Score=40.87 Aligned_cols=32 Identities=22% Similarity=0.254 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||+|..|.+.|..|.+ .|.+|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR------RGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHH------CCCEEEEEECCH
Confidence 48999999999999999998 789999999875
No 392
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.89 E-value=0.014 Score=41.65 Aligned_cols=33 Identities=24% Similarity=0.477 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|+|||+|-.|.++|+.|+. .++ +++++|...
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~------~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMAL------RQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHH------TTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 579999999999999999998 676 899999875
No 393
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=95.89 E-value=0.0067 Score=44.22 Aligned_cols=33 Identities=15% Similarity=0.124 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCC-------ceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKE-------LKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-------~~v~vlE~~~~ 62 (182)
.|.|||+|..|.+.|..|++ .| .+|+++++.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~------~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGT------NAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHH------HHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHH------cCCccCCCCCeEEEEECChh
Confidence 59999999999999999998 67 89999998764
No 394
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=95.87 E-value=0.013 Score=42.82 Aligned_cols=33 Identities=33% Similarity=0.442 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|||+|..|..+|..+.. .|.+|+++|+.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~------~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANG------MGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 469999999999999999988 799999999875
No 395
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=95.87 E-value=0.008 Score=47.75 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=31.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|..+|..+++ .|++|+++|..+.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~------aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFAR------VGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------TTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHh------CCCchhcccchHh
Confidence 479999999999999999999 8999999998753
No 396
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.86 E-value=0.012 Score=42.02 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=29.2
Q ss_pred cEEEECCChHHHH-HHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMA-AAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~-~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|.+|++ +|..|.+ .|.+|++.|+...
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~------~G~~V~~~D~~~~ 39 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKE------AGFEVSGCDAKMY 39 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHH------TTCEEEEEESSCC
T ss_pred EEEEEEECHHHHHHHHHHHHh------CCCEEEEEcCCCC
Confidence 5999999999997 7888888 8999999998753
No 397
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.86 E-value=0.012 Score=43.28 Aligned_cols=39 Identities=18% Similarity=0.301 Sum_probs=31.7
Q ss_pred cccccccccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 16 MERFEDVADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 16 ~~~~~~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
++.|++...|+|+|+|..|..++..+.+ .|++|++++ .+
T Consensus 18 ~~~mm~~~~I~ilGgG~lg~~l~~aa~~------lG~~v~~~d-~~ 56 (403)
T 3k5i_A 18 QGHMWNSRKVGVLGGGQLGRMLVESANR------LNIQVNVLD-AD 56 (403)
T ss_dssp ---CCSCCEEEEECCSHHHHHHHHHHHH------HTCEEEEEE-ST
T ss_pred eccCCCCCEEEEECCCHHHHHHHHHHHH------CCCEEEEEE-CC
Confidence 3445555679999999999999999999 799999999 54
No 398
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.85 E-value=0.012 Score=44.50 Aligned_cols=32 Identities=16% Similarity=0.450 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
+|.|||.|..|...|..|++ .|.+|++++|.+
T Consensus 4 ~IgvIG~G~mG~~lA~~La~------~G~~V~v~dr~~ 35 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMND------HGFVVCAFNRTV 35 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHH------TTCCEEEECSST
T ss_pred eEEEEChHHHHHHHHHHHHH------CCCeEEEEeCCH
Confidence 69999999999999999999 899999999875
No 399
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.85 E-value=0.0096 Score=42.22 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCC--ceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKE--LKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g--~~v~vlE~~~ 61 (182)
.|+|||+|-.|.++|..|++ .| .+|+++|+..
T Consensus 3 kI~VIGaG~~G~~la~~L~~------~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIA------QGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCCCEEEEEcCCH
Confidence 59999999999999999998 67 6899999874
No 400
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.85 E-value=0.0088 Score=42.77 Aligned_cols=32 Identities=19% Similarity=0.385 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|||+|.+|+-+|..|++ .| +|+++++.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~------~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVST------VA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTT------TS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHh------hC-CEEEEECCC
Confidence 479999999999999999998 66 799998874
No 401
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.84 E-value=0.014 Score=40.75 Aligned_cols=34 Identities=15% Similarity=0.546 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc---eEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL---KVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~---~v~vlE~~~~ 62 (182)
..|.|||+|-.|.+.|..|.+ .|+ +|+++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~------~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIA------NGYDPNRICVTNRSLD 40 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHH------TTCCGGGEEEECSSSH
T ss_pred CEEEEEcccHHHHHHHHHHHH------CCCCCCeEEEEeCCHH
Confidence 369999999999999999999 787 8999998863
No 402
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=95.83 E-value=0.01 Score=41.85 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
.|.|||+|..|.++|+.|++ .|. +++++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~------~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLL------NLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCCCeEEEEECCh
Confidence 48999999999999999998 666 899999875
No 403
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.81 E-value=0.025 Score=42.68 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEEEe
Q psy2240 131 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIAT 170 (182)
Q Consensus 131 ~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v~~ 170 (182)
..+.+.|.+.+++.|++|+++++|++|+. +++++++|..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~ 259 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHL 259 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEE
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEe
Confidence 46889999999999999999999999987 4566666554
No 404
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.81 E-value=0.012 Score=40.39 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
...|+|||+|-.|..+|..|++ .|+ +++|+|.+.
T Consensus 28 ~~~VlvvG~GglG~~va~~La~------~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAG------AGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHH------TTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHH------cCCCeEEEEeCCC
Confidence 4579999999999999999999 786 899998875
No 405
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=95.80 E-value=0.012 Score=40.57 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=30.1
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCC----ceEEEEecCCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKE----LKVCLVEKAAEV 63 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g----~~v~vlE~~~~~ 63 (182)
.|.|||+|..|.+.|..|++ .| .+|+++++.+..
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~------~g~~~~~~v~~~~~~~~~ 43 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIAN------ANIIKKENLFYYGPSKKN 43 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHH------HTSSCGGGEEEECSSCCS
T ss_pred EEEEECcCHHHHHHHHHHHH------CCCCCCCeEEEEeCCccc
Confidence 69999999999999999998 67 689999988653
No 406
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.80 E-value=0.0097 Score=47.33 Aligned_cols=33 Identities=21% Similarity=0.126 Sum_probs=30.5
Q ss_pred ccEEEEC--CChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVG--GGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIG--gG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+||| ||..|+-+|..|++ .|.+|+++++.+
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~------~G~~Vtlv~~~~ 563 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLAT------AGHEVTIVSGVH 563 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHH------TTCEEEEEESSC
T ss_pred CeEEEEcCCCCchHHHHHHHHHH------cCCEEEEEeccc
Confidence 3799999 99999999999999 899999999887
No 407
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=95.80 E-value=0.011 Score=41.95 Aligned_cols=34 Identities=24% Similarity=0.606 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~~ 62 (182)
..|.|||+|..|..+|+.|+. .|+ +++|+|....
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~------~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISA------KGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHh------cCCCCEEEEEcCCcc
Confidence 469999999999999999988 677 9999998763
No 408
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.80 E-value=0.0098 Score=44.19 Aligned_cols=33 Identities=18% Similarity=0.369 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||.|..|+.+|..|++ |.+|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-------G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-------NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-------TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-------CCeEEEEecCHH
Confidence 369999999999999999875 799999998753
No 409
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.79 E-value=0.012 Score=41.34 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|..|...|..|++ .|.+|+++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~------~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK------HGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH------TTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 48999999999999999998 7899999998753
No 410
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.78 E-value=0.0047 Score=41.87 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.-.++|+|+|..|..+|..|.+ .|. |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~------~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRG------SEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTT------SEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHh------CCe-EEEEECCHH
Confidence 3469999999999999999988 788 999998864
No 411
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=95.77 E-value=0.0092 Score=47.32 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||+|..|..+|..|++ .|++|+++|+++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~------aG~~V~l~D~~~~ 348 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSAS------KGTPILMKDINEH 348 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHH------TTCCEEEECSSHH
T ss_pred CEEEEECCChhhHHHHHHHHh------CCCEEEEEECCHH
Confidence 369999999999999999999 8999999998753
No 412
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=95.76 E-value=0.0082 Score=45.34 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||.|..|+..|..|++. +.|.+|+++|+++
T Consensus 11 kI~VIG~G~vG~~~A~~La~~----g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHK----CPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECCH
Confidence 699999999999999999981 1278999999875
No 413
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=95.75 E-value=0.016 Score=40.40 Aligned_cols=32 Identities=28% Similarity=0.341 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
.|.|||+|..|.+.|..|++ .|. +|+++++.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~------~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRR------SGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHH------TTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHh------cCCCcEEEEEeCCH
Confidence 49999999999999999998 787 899999875
No 414
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.74 E-value=0.013 Score=48.44 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
+|+|||||..|+-+|..|.+ .|. +|+++++.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~------~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALR------CGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHH------TTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHH------cCCCEEEEEEecC
Confidence 79999999999999999999 786 899999876
No 415
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=95.74 E-value=0.0087 Score=44.06 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=26.9
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCC-CceEEEEe
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGK-ELKVCLVE 58 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~-g~~v~vlE 58 (182)
.|.|||+|..|.+.|..|++ . |.+|++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~------~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAAS------RDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTT------STTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHh------CCCCEEEEEe
Confidence 59999999999999999987 4 89999999
No 416
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.73 E-value=0.01 Score=44.17 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=31.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
....|||.|-.|+.+|..|++ .|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~------~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAK------HGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHH------CCCEEEEEECCHH
Confidence 468999999999999999999 8999999999864
No 417
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.73 E-value=0.013 Score=41.85 Aligned_cols=33 Identities=18% Similarity=0.413 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|.|||+|..|.++|+.|++ .|+ +++++|...
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~------~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALIN------QGITDELVVIDVNK 40 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCceEEEEecch
Confidence 469999999999999999998 566 899999753
No 418
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=95.73 E-value=0.012 Score=44.23 Aligned_cols=33 Identities=30% Similarity=0.355 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|+|+|..|.++|..|+. .|.+|++.|+.+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa------~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQ------AGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHH------CCCEEEEEcCCH
Confidence 359999999999999999999 899999999875
No 419
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=95.72 E-value=0.015 Score=41.47 Aligned_cols=33 Identities=24% Similarity=0.512 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|+|||+|..|.++|+.|+. .+. +++++|...
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~------~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMN------QGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHh------CCCCCEEEEEeCCc
Confidence 469999999999999999987 454 899999874
No 420
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=95.72 E-value=0.016 Score=43.52 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
..|+|||||.+|...+..|.+ .|.+|+|++..
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~------~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLE------AGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHh------CcCEEEEEcCC
Confidence 469999999999999999999 89999999975
No 421
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.71 E-value=0.012 Score=40.46 Aligned_cols=32 Identities=25% Similarity=0.458 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCC-ceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKE-LKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g-~~v~vlE~~~ 61 (182)
.|.|||+|..|...|..|++ .| .+|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~------~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVK------QGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHH------CCCCeEEEECCCH
Confidence 48999999999999999998 78 8999999874
No 422
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.67 E-value=0.015 Score=40.96 Aligned_cols=33 Identities=9% Similarity=0.314 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..++|||+|.+|.++|..|.+ .|. +|+++.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~------~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLS------TAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------TTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHH------CCCCEEEEEeCCH
Confidence 369999999999999999998 787 999999874
No 423
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.67 E-value=0.015 Score=43.93 Aligned_cols=32 Identities=31% Similarity=0.490 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
+|.|||.|..|...|..|++ .|.+|++++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~------~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAE------KGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHH------TTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHH------CCCEEEEEeCCH
Confidence 59999999999999999999 899999999875
No 424
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=95.67 E-value=0.02 Score=40.96 Aligned_cols=33 Identities=36% Similarity=0.561 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|.|||+|..|.++|+.|+. .|+ +++++|...
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~------~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLM------KDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHH------HCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCCeEEEEECCH
Confidence 479999999999999999998 676 899999764
No 425
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.66 E-value=0.017 Score=40.36 Aligned_cols=32 Identities=22% Similarity=0.403 Sum_probs=29.7
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||+ |-.|...|..|.+ .|.+|+++++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~------~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHD------SAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHH------SSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 5999999 9999999999998 899999999874
No 426
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.66 E-value=0.029 Score=40.91 Aligned_cols=35 Identities=26% Similarity=0.422 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|||+|..|.+++..+.+ .|++|++++..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~------lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQK------MGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEEECCCC
Confidence 3469999999999999999999 8999999998754
No 427
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.65 E-value=0.017 Score=43.51 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.+|.|||.|..|...|..|++ .|.+|++++|.+
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~------~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVES------RGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHH------TTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHh------CCCEEEEEcCCH
Confidence 479999999999999999999 899999999875
No 428
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=95.65 E-value=0.014 Score=40.99 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||+|..|...|..|++ .|.+|+++++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLK------AGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHH------TTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHh------CCCEEEEEeCCH
Confidence 59999999999999999998 789999999875
No 429
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=95.62 E-value=0.014 Score=41.46 Aligned_cols=32 Identities=22% Similarity=0.487 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
.|.|||+|..|.++|+.|++ .++ +++++|..+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~------~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVAR------QDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH------HTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCch
Confidence 48999999999999999998 565 899999875
No 430
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.61 E-value=0.026 Score=41.83 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=30.8
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
...|+|+|+|..|..++..+.+ .|++|+++|..+.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~------lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQS------MGYRVAVLDPDPA 69 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH------CCCEEEEECCCCc
Confidence 4579999999999999999998 8999999987653
No 431
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.57 E-value=0.014 Score=41.08 Aligned_cols=33 Identities=24% Similarity=0.379 Sum_probs=29.1
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
...|.|||+|..|...|..|+ . |++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECCH
Confidence 347999999999999999987 3 89999999875
No 432
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=95.56 E-value=0.019 Score=44.26 Aligned_cols=35 Identities=29% Similarity=0.429 Sum_probs=32.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
-.++|||+|-.|..+|..|.+ .|.+|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~------~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDR------KPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHH------TTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHH------CCCCEEEEECChHH
Confidence 479999999999999999999 89999999999754
No 433
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=95.56 E-value=0.014 Score=40.63 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|+|+|.+|.++|..|++ .|.+|+++.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~------~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQ------AQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHH------TTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHH------CCCEEEEEECCH
Confidence 469999999999999999999 789999999875
No 434
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.54 E-value=0.025 Score=40.58 Aligned_cols=34 Identities=35% Similarity=0.582 Sum_probs=29.5
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
...|.|||+|..|.++|+.|+. .|+ +++++|...
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~------~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILM------KDLADELALVDVIE 54 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHH------TTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh------CCCCceEEEEeCCh
Confidence 3479999999999999999998 676 899999763
No 435
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.52 E-value=0.025 Score=39.29 Aligned_cols=33 Identities=27% Similarity=0.448 Sum_probs=30.2
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|.|+|..|..++..|.+ .|.+|+++.|...
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~------~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTA------QGHEVTGLRRSAQ 37 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHH------TTCCEEEEECTTS
T ss_pred cEEEECCCHHHHHHHHHHHH------CCCEEEEEeCCcc
Confidence 59999999999999999999 8999999998754
No 436
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.51 E-value=0.022 Score=40.98 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|..|.+.|..|.+ .|.+|++.++.+.
T Consensus 18 ~I~IIG~G~mG~alA~~L~~------~G~~V~~~~~~~~ 50 (338)
T 1np3_A 18 KVAIIGYGSQGHAHACNLKD------SGVDVTVGLRSGS 50 (338)
T ss_dssp CEEEECCSHHHHHHHHHHHH------TTCCEEEECCTTC
T ss_pred EEEEECchHHHHHHHHHHHH------CcCEEEEEECChH
Confidence 59999999999999999998 7899999998753
No 437
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.50 E-value=0.017 Score=43.27 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhh--------------hcCCC-ceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAE--------------KDGKE-LKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~--------------~~~~g-~~v~vlE~~~~~ 63 (182)
..|+|||+|.+|+-+|..|++..+ -+..| .+|+|+++....
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 479999999999999999986100 00014 489999987643
No 438
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.50 E-value=0.019 Score=40.72 Aligned_cols=31 Identities=29% Similarity=0.481 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|||+|..|.+.|..|+. |.+|++++|++
T Consensus 4 kI~IiGaGa~G~~~a~~L~~-------g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSL-------YHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHT-------TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhc-------CCceEEEECCH
Confidence 59999999999999999973 78999999875
No 439
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.49 E-value=0.018 Score=39.37 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=29.9
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc----eEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL----KVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~----~v~vlE~~~~ 62 (182)
.|.|||.|..|.+.|..|.+ .|+ +|+++++++.
T Consensus 4 ~i~iIG~G~mG~~~a~~l~~------~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 4 QIGFIGCGNMGMAMIGGMIN------KNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CEEEECCSHHHHHHHHHHHH------TTSSCGGGEEEECSCHH
T ss_pred eEEEECccHHHHHHHHHHHh------CCCCCCCeEEEEeCCHH
Confidence 59999999999999999999 787 9999998753
No 440
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.48 E-value=0.023 Score=39.09 Aligned_cols=33 Identities=33% Similarity=0.459 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
.++|||+|-+|.+++..|.+ .|. +|++++|.+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~------~G~~~I~v~nR~~~ 143 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQ------MGVKDIWVVNRTIE 143 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHH------TTCCCEEEEESCHH
T ss_pred eEEEECcHHHHHHHHHHHHH------cCCCEEEEEeCCHH
Confidence 79999999999999999999 788 8999998753
No 441
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=95.47 E-value=0.017 Score=41.75 Aligned_cols=35 Identities=26% Similarity=0.419 Sum_probs=30.7
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
...|+|||+|..|..+|..|++ .|. +++|+|.+..
T Consensus 118 ~~~VlvvG~GglGs~va~~La~------aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILAT------SGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------HTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHh------CCCCeEEEECCCcC
Confidence 4579999999999999999999 676 8999998753
No 442
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.46 E-value=0.0075 Score=49.47 Aligned_cols=35 Identities=9% Similarity=0.153 Sum_probs=31.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..++|||+|..|+-+|..|++ .|.+|+|+|+.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~------~G~~Vtvv~~~~~~ 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAA------TGGVVAVIDARSSI 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGG------GTCCSEEEESCSSC
T ss_pred CeEEEEcCCHHHHHHHHHHHH------cCCcEEEEECCCcc
Confidence 479999999999999999998 78999999998754
No 443
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.46 E-value=0.021 Score=44.10 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
...|+|||+|-.|+.+|..|++ .|+ +++|+|.+..
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~------aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIA------WGVRKITFVDNGTV 361 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------TTCCEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCCEEEEEcCCCC
Confidence 4579999999999999999999 786 8999998763
No 444
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=95.41 E-value=0.018 Score=40.11 Aligned_cols=33 Identities=24% Similarity=0.380 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|||+|.+|.+.|..|.+ .|.+|++++|.+
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~------~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVK------EGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------HTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHH------cCCEEEEEECCH
Confidence 469999999999999999998 678999999875
No 445
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=95.38 E-value=0.027 Score=39.74 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..+.|||+|..|..+|..|.. .|.+|+++++.+
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~------~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAA------LGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHH------CCCEEEEEECCH
Confidence 469999999999999999988 799999999875
No 446
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.38 E-value=0.023 Score=40.50 Aligned_cols=34 Identities=26% Similarity=0.478 Sum_probs=29.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
...|+|||+|-.|.++|+.|+. .++ .+.++|...
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~------~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQ------QGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHH------HTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHc------CCCCCEEEEEeCCc
Confidence 3579999999999999999988 454 899999863
No 447
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=95.38 E-value=0.016 Score=40.43 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=30.9
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~~ 63 (182)
..++|||+|-+|.+++..|.+ .|. +|+++.|....
T Consensus 118 k~vlvlGaGg~g~aia~~L~~------~G~~~v~v~~R~~~~ 153 (277)
T 3don_A 118 AYILILGAGGASKGIANELYK------IVRPTLTVANRTMSR 153 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHT------TCCSCCEEECSCGGG
T ss_pred CEEEEECCcHHHHHHHHHHHH------CCCCEEEEEeCCHHH
Confidence 469999999999999999999 888 89999988643
No 448
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.37 E-value=0.034 Score=41.92 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHcCcEEecCCccceeEEcCCCcEEEEEe
Q psy2240 131 GHVVKWLGEQAEAMGVEIYPGIPASEVLYHGDGSVKGIAT 170 (182)
Q Consensus 131 ~~l~~~l~~~~~~~gv~i~~~~~v~~i~~~~~g~~~~v~~ 170 (182)
..+.+.|.+.+++.|++|+++++|++|..++++.+.+|.+
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~ 295 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKS 295 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEE
Confidence 4789999999999999999999999998756677776655
No 449
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.37 E-value=0.054 Score=40.24 Aligned_cols=25 Identities=20% Similarity=0.255 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCcEEecCCccceeE
Q psy2240 134 VKWLGEQAEAMGVEIYPGIPASEVL 158 (182)
Q Consensus 134 ~~~l~~~~~~~gv~i~~~~~v~~i~ 158 (182)
...+.+.+++.|++++.+++|++++
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~ 235 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVE 235 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEE
Confidence 3455566677899999999999885
No 450
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.35 E-value=0.028 Score=39.96 Aligned_cols=32 Identities=19% Similarity=0.381 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~ 60 (182)
..++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~------~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAAL------DGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHH------CCCCEEEEEECC
Confidence 469999999999999999999 898 89999987
No 451
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.35 E-value=0.021 Score=40.63 Aligned_cols=33 Identities=21% Similarity=0.521 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|+|||+|-.|.++|+.|+. .++ .+.++|...
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~------~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVN------QSIVDELVIIDLDT 41 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HCSCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCCEEEEEeCCh
Confidence 479999999999999999988 554 899998753
No 452
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=95.35 E-value=0.028 Score=39.51 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..+.|||.|..|..+|..|.. .|.+|+++++.+
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~------~G~~V~~~dr~~ 188 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAA------LGAKVKVGARES 188 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSH
T ss_pred CEEEEEeeCHHHHHHHHHHHh------CCCEEEEEECCH
Confidence 469999999999999999988 799999999875
No 453
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.35 E-value=0.028 Score=39.39 Aligned_cols=33 Identities=30% Similarity=0.385 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..++|+|+|-+|.+++..|++ .|. +|+|+.|..
T Consensus 128 k~vlVlGaGG~g~aia~~L~~------~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVT------HGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHH------CCCCEEEEEECCH
Confidence 469999999999999999999 788 799998875
No 454
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=95.33 E-value=0.017 Score=40.80 Aligned_cols=35 Identities=17% Similarity=0.251 Sum_probs=27.1
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEVG 64 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~~ 64 (182)
.|-+||-|..|...|..|.+ .|++|++++|.+...
T Consensus 7 kIgfIGLG~MG~~mA~~L~~------~G~~V~v~dr~~~~~ 41 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLE------AGYELVVWNRTASKA 41 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHH------TTCEEEEC-------
T ss_pred cEEEEecHHHHHHHHHHHHH------CCCeEEEEeCCHHHH
Confidence 59999999999999999999 899999999987543
No 455
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.31 E-value=0.021 Score=43.22 Aligned_cols=34 Identities=26% Similarity=0.340 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||.|..|..+|..|.. .|.+|+++|+++.
T Consensus 275 ktV~IiG~G~IG~~~A~~lka------~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKG------QGARVSVTEIDPI 308 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHH------CCCEEEEEeCCHH
Confidence 469999999999999999987 7999999998753
No 456
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=95.31 E-value=0.02 Score=40.95 Aligned_cols=33 Identities=21% Similarity=0.418 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|+|||+|..|.++|+.|+. .|+ ++.++|...
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~------~~~~~el~l~D~~~ 44 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVL------QGIAQEIGIVDIFK 44 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHh------CCCCCeEEEEeCCh
Confidence 369999999999999999998 566 899999753
No 457
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.30 E-value=0.023 Score=43.87 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
...|+|||+|-.|+.+|..|++ .|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~------aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIA------WGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT------TTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCCEEEEECCCc
Confidence 3579999999999999999999 787 899998775
No 458
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.28 E-value=0.035 Score=36.82 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=29.0
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|+|.|| |..|..++..|.+ .|.+|+++.|.+
T Consensus 2 kvlVtGatG~iG~~l~~~L~~------~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN------RGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH------TTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHh------CCCEEEEEEcCc
Confidence 3899996 9999999999999 899999999875
No 459
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=95.26 E-value=0.023 Score=42.06 Aligned_cols=33 Identities=27% Similarity=0.318 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|||.|..|..+|..|.. .|.+|++.|+++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra------~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKA------MGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHH------CCCEEEEEeCCh
Confidence 469999999999999999987 799999999875
No 460
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.26 E-value=0.031 Score=40.27 Aligned_cols=33 Identities=30% Similarity=0.448 Sum_probs=28.4
Q ss_pred ccEEEECC-ChHHHHHHHHHHHhhhhcCCCc--eEEEEecCC
Q psy2240 23 ADVVIVGG-GPAGMAAAIRLKQLAEKDGKEL--KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~--~v~vlE~~~ 61 (182)
..|+|||+ |-.|.++|+.++. .|. +++++|...
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~------~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAM------MRLTPNLCLYDPFA 44 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHH------TTCCSCEEEECSCH
T ss_pred CEEEEECCCChHHHHHHHHHHh------cCCCCEEEEEeCCc
Confidence 46999997 9999999999988 664 899999763
No 461
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.25 E-value=0.0053 Score=41.63 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
.|.|||.|..|.+.|..|.+ .|++|+.+++.
T Consensus 8 kI~IIG~G~~G~sLA~~L~~------~G~~V~~~~~~ 38 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDS------VGHYVTVLHAP 38 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHH------TTCEEEECSSG
T ss_pred EEEEEeeCHHHHHHHHHHHH------CCCEEEEecCH
Confidence 59999999999999999999 89999999875
No 462
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=95.25 E-value=0.025 Score=39.07 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCce-EEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELK-VCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~-v~vlE~~~ 61 (182)
.|.|||+|-.|...|..|++ .|.+ |.++++.+
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~------~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYR------KGFRIVQVYSRTE 44 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHH------HTCCEEEEECSSH
T ss_pred eEEEEcCCHHHHHHHHHHHH------CCCeEEEEEeCCH
Confidence 69999999999999999998 6888 89999875
No 463
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=95.23 E-value=0.032 Score=39.93 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=30.7
Q ss_pred ccEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 23 ADVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 23 ~dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
..|+|.|| |..|..++..|.+ .|.+|+++.|.+..
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~------~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRT------QGRTVRGFDLRPSG 55 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHH------TTCCEEEEESSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHh------CCCEEEEEeCCCCC
Confidence 46999998 9999999999999 89999999988643
No 464
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.22 E-value=0.024 Score=40.26 Aligned_cols=32 Identities=28% Similarity=0.540 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
.|.|||+|..|.++|+.|+. .++ .+.++|...
T Consensus 1 KI~IiGaG~vG~~~a~~l~~------~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM------RGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH------HTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHh------CCCCEEEEEcCCh
Confidence 48999999999999999988 566 699999875
No 465
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.21 E-value=0.042 Score=40.18 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|..|..++..+.+ .|++|++++..+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~------~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKE------MGYKIAVLDPTKN 48 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TTCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHH------cCCEEEEEeCCCC
Confidence 469999999999999999998 8999999997753
No 466
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.17 E-value=0.023 Score=40.48 Aligned_cols=32 Identities=16% Similarity=0.188 Sum_probs=28.4
Q ss_pred ccEEEECCC-hHHHHHHHHHHHhhhhcCCCceEEEEecC
Q psy2240 23 ADVVIVGGG-PAGMAAAIRLKQLAEKDGKELKVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG-~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~ 60 (182)
..++|||+| +.|..+|..|.. .|.+|++++|.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~------~gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLAN------DGATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHT------TSCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHH------CCCEEEEEeCc
Confidence 479999999 679999999998 78999999775
No 467
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=95.16 E-value=0.024 Score=40.91 Aligned_cols=35 Identities=17% Similarity=0.223 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCCC
Q psy2240 22 VADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAAE 62 (182)
Q Consensus 22 ~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~~ 62 (182)
...|+|||+|..|+.+|..|++ .|+ +++|+|.+..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~------~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLIL------AGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH------HTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHH------cCCCEEEEEECCCc
Confidence 4689999999999999999999 787 8999987753
No 468
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.16 E-value=0.029 Score=39.29 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..++|+|+|-+|.+++..|.+ .|. +|+|+.|..
T Consensus 123 k~vlvlGaGGaaraia~~L~~------~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKD------NFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHH------TTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHH------cCCCEEEEEeCCH
Confidence 479999999999999999999 788 899998875
No 469
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.15 E-value=0.021 Score=40.08 Aligned_cols=32 Identities=25% Similarity=0.494 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|+|+|-.|.++|..|++ .| +|++++|..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~------~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAK------DN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTS------SS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHH------CC-CEEEEECCH
Confidence 359999999999999999998 89 999998864
No 470
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.13 E-value=0.033 Score=38.46 Aligned_cols=32 Identities=28% Similarity=0.514 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.++|||+|..|.+.|..|.+ .|.+|++++|.+
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~------~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALRE------AGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHH------TTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHH------CCCEEEEEECCH
Confidence 79999999999999999998 788999999874
No 471
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.12 E-value=0.026 Score=38.91 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=27.5
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEec
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEK 59 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~ 59 (182)
.|.|||.|..|...|..|++ .|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~------~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS------RGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH------TTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHH------CCCeEEEeCC
Confidence 48999999999999999999 8999999876
No 472
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.08 E-value=0.038 Score=38.46 Aligned_cols=33 Identities=18% Similarity=0.301 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..++|+|+|-+|.+++..|++ .|. +|+++.|..
T Consensus 121 k~~lvlGaGg~~~aia~~L~~------~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQ------AGPSELVIANRDM 154 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHH------TCCSEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHH------cCCCEEEEEeCCH
Confidence 469999999999999999999 896 999998875
No 473
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.08 E-value=0.045 Score=35.79 Aligned_cols=33 Identities=18% Similarity=0.406 Sum_probs=29.9
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|.|| |..|..++..|.+ .|.+|+++.|.+.
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~------~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQ------AGYEVTVLVRDSS 38 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHH------TTCEEEEEESCGG
T ss_pred EEEEEcCCcHHHHHHHHHHHH------CCCeEEEEEeChh
Confidence 5999998 9999999999999 8999999998754
No 474
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=95.08 E-value=0.05 Score=37.44 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=28.7
Q ss_pred ccEEEECC-C-hHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGG-G-PAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGg-G-~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.-++|.|| | -.|..+|..|++ .|.+|++++|..
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~------~G~~V~~~~r~~ 57 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALL------EGADVVISDYHE 57 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred CEEEEECCCCCchHHHHHHHHHH------CCCEEEEecCCH
Confidence 35899998 6 489999999999 899999998874
No 475
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=95.05 E-value=0.033 Score=41.44 Aligned_cols=35 Identities=17% Similarity=0.407 Sum_probs=31.0
Q ss_pred ccccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 21 DVADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 21 ~~~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
....|+|||+|-.|+.+|..|++ .|+ +++|+|.+.
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~------aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLAL------SGFRQIHVIDMDT 74 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHH------TTCCCEEEEECCB
T ss_pred cCCEEEEECcCHHHHHHHHHHHH------cCCCEEEEEcCCE
Confidence 35689999999999999999999 787 899998764
No 476
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.04 E-value=0.03 Score=39.12 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||+|..|.+.|..|++. +.+.+|+++++++
T Consensus 8 ~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 8 TIYIAGLGLIGASLALGIKRD----HPHYKIVGYNRSD 41 (290)
T ss_dssp EEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSSH
T ss_pred eEEEEeeCHHHHHHHHHHHhC----CCCcEEEEEcCCH
Confidence 599999999999999999881 1267999999874
No 477
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.99 E-value=0.028 Score=37.54 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=29.7
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|.|| |..|..++..|.+ .|.+|+++.|.+.
T Consensus 6 ~ilItGatG~iG~~l~~~L~~------~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALN------RGFEVTAVVRHPE 39 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHT------TTCEEEEECSCGG
T ss_pred EEEEEcCCchHHHHHHHHHHH------CCCEEEEEEcCcc
Confidence 5999995 9999999999999 8999999999864
No 478
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.98 E-value=0.024 Score=41.80 Aligned_cols=31 Identities=19% Similarity=0.425 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||.|..|+..|..|++ |.+|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-------G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-------QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-------TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-------CCEEEEEECCH
Confidence 48999999999999999985 68999999875
No 479
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.98 E-value=0.028 Score=39.04 Aligned_cols=33 Identities=9% Similarity=0.167 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|.|+|..|..++..|.+ .|.+|+++.|.+.
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~------~g~~V~~~~r~~~ 39 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAP------QGWRIIGTSRNPD 39 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGG------GTCEEEEEESCGG
T ss_pred cEEEECCcHHHHHHHHHHHH------CCCEEEEEEcChh
Confidence 59999999999999999998 7999999998753
No 480
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.97 E-value=0.039 Score=38.62 Aligned_cols=33 Identities=15% Similarity=0.335 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..++|+|+|-+|.+++..|++ .|. +|+++.|.+
T Consensus 127 k~vlvlGaGg~g~aia~~L~~------~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLD------QQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------TCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHh------cCCCeEEEEECCH
Confidence 469999999999999999998 896 999998875
No 481
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=94.97 E-value=0.046 Score=36.40 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=28.8
Q ss_pred EEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 25 VVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 25 v~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
|+|.|| |..|..++..|.+ .|.+|+++.|.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~------~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARR------RGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHH------TTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHH------CCCEEEEEEecc
Confidence 899998 9999999999999 899999999875
No 482
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.96 E-value=0.043 Score=39.01 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKA 60 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~ 60 (182)
..++|+|+|-+|.+++..|++ .|. +|+|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~------~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAI------EGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHH------cCCCEEEEEECC
Confidence 469999999999999999999 888 89999887
No 483
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=94.88 E-value=0.048 Score=39.12 Aligned_cols=34 Identities=24% Similarity=0.340 Sum_probs=30.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|.|||.|-.|..+|..|+. .|.+|+++++.+.
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~~------~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAKG------FNMRILYYSRTRK 184 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSCC
T ss_pred CEEEEEccCHHHHHHHHHHHh------CCCEEEEECCCcc
Confidence 369999999999999999998 8999999998764
No 484
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=94.87 E-value=0.073 Score=39.42 Aligned_cols=26 Identities=0% Similarity=0.049 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCcEEecCCccceeEE
Q psy2240 134 VKWLGEQAEAMGVEIYPGIPASEVLY 159 (182)
Q Consensus 134 ~~~l~~~~~~~gv~i~~~~~v~~i~~ 159 (182)
.+.+.+.+++.|++++++++|++++.
T Consensus 203 ~~~l~~~l~~~GV~i~~~~~v~~v~~ 228 (430)
T 3h28_A 203 KRLVEDLFAERNIDWIANVAVKAIEP 228 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeC
Confidence 45566677788999999999999853
No 485
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.85 E-value=0.046 Score=38.48 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=30.2
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|.|| |..|..++..|.+ .|.+|+++.|.+.
T Consensus 9 ~vlVtGatG~iG~~l~~~L~~------~g~~V~~~~r~~~ 42 (321)
T 3vps_A 9 RILITGGAGFIGGHLARALVA------SGEEVTVLDDLRV 42 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHHH------TTCCEEEECCCSS
T ss_pred eEEEECCCChHHHHHHHHHHH------CCCEEEEEecCCc
Confidence 5999999 9999999999999 8999999998764
No 486
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.84 E-value=0.049 Score=38.10 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=29.6
Q ss_pred ccEEEEC-CChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVG-GGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIG-gG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|+| +|.+|.++|..|++ .|.+|+++.|..
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~------~G~~V~i~~R~~ 153 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAG------EGAEVVLCGRKL 153 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH------TTCEEEEEESSH
T ss_pred CEEEEECCCcHHHHHHHHHHHH------CcCEEEEEECCH
Confidence 4699999 89999999999999 899999998864
No 487
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.83 E-value=0.029 Score=42.97 Aligned_cols=34 Identities=12% Similarity=0.417 Sum_probs=30.6
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
..|+|||+|.+|+-+|..|++ .+.+|++++|.+.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~------~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAK------QAAELFVFQRTPH 220 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------HBSEEEEEESSCC
T ss_pred CEEEEECCCccHHHHHHHHhh------cCceEEEEEcCCc
Confidence 479999999999999999998 6889999998764
No 488
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.81 E-value=0.037 Score=39.38 Aligned_cols=32 Identities=25% Similarity=0.429 Sum_probs=28.3
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCC--ceEEEEecCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKE--LKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g--~~v~vlE~~~ 61 (182)
.|+|||+ |-.|.+++..|++ .+ .++.++|..+
T Consensus 2 KI~IiGa~G~VG~~la~~L~~------~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKN------SPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHT------CTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHh------CCCCcEEEEEeCCc
Confidence 5899998 9999999999998 66 5899999875
No 489
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.79 E-value=0.047 Score=39.67 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|+|.|-.|..+|..|.+ .|.+|++.|+.+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~------~GakVvv~D~~~ 206 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNT------EGAKLVVTDVNK 206 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHH------CCCEEEEEcCCH
Confidence 469999999999999999999 899999998764
No 490
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=94.77 E-value=0.034 Score=41.01 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..|+|||+|..|..++..|.. .|. +|+++++.+
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~------~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVD------RGVRAVLVANRTY 201 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHH------HCCSEEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHH------CCCCEEEEEeCCH
Confidence 469999999999999999988 688 899999875
No 491
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=94.74 E-value=0.04 Score=38.35 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCc-eEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKEL-KVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~-~v~vlE~~~ 61 (182)
..++|||+|-+|.+++..|.+ .|. +|+|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~------~G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKN------SGFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHH------TTCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHH------CCCCEEEEEeCCH
Confidence 469999999999999999999 786 799998874
No 492
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=94.70 E-value=0.027 Score=39.44 Aligned_cols=32 Identities=19% Similarity=0.262 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|.|||.|..|...|..|++ .|.+|++++ ++.
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~------~g~~V~~~~-~~~ 36 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLAR------AGHQLHVTT-IGP 36 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHH------TTCEEEECC-SSC
T ss_pred EEEEEccCHHHHHHHHHHHh------CCCEEEEEc-CHH
Confidence 59999999999999999998 799999998 653
No 493
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=94.69 E-value=0.037 Score=40.55 Aligned_cols=34 Identities=21% Similarity=0.294 Sum_probs=30.6
Q ss_pred cccEEEECC-ChHHHHHHHHHHHhhhhcCCCc---eEEEEecCC
Q psy2240 22 VADVVIVGG-GPAGMAAAIRLKQLAEKDGKEL---KVCLVEKAA 61 (182)
Q Consensus 22 ~~dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~---~v~vlE~~~ 61 (182)
...|+|||| |.+|+.++..+.. .|. +|+++|.+.
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~------lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHK------VGIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHH------TTCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHh------CCCCcCceEEeeccc
Confidence 568999999 9999999999888 787 899999976
No 494
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.67 E-value=0.068 Score=37.38 Aligned_cols=34 Identities=29% Similarity=0.392 Sum_probs=30.2
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
.|+|.|| |..|..++..|.+ .|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~------~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNA------RGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHH------TTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHH------CCCEEEEEECCCCc
Confidence 3899998 9999999999999 89999999987643
No 495
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=94.66 E-value=0.037 Score=38.02 Aligned_cols=32 Identities=22% Similarity=0.245 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 24 DVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 24 dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
.|.|||.|..|...|..|.+ .|.+|.++++++
T Consensus 5 ~i~iiG~G~mG~~~a~~l~~------~g~~v~~~~~~~ 36 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLKQ------TPHELIISGSSL 36 (259)
T ss_dssp EEEEECCSHHHHHHHHHHTT------SSCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh------CCCeEEEECCCH
Confidence 59999999999999999988 788999999875
No 496
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.54 E-value=0.054 Score=38.25 Aligned_cols=33 Identities=15% Similarity=0.218 Sum_probs=29.6
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.|+|+|| |-.|..++..|.+ .|.+|+++.|.+.
T Consensus 13 ~ilVtGatG~iG~~l~~~L~~------~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 13 KILIFGGTGYIGNHMVKGSLK------LGHPTYVFTRPNS 46 (318)
T ss_dssp CEEEETTTSTTHHHHHHHHHH------TTCCEEEEECTTC
T ss_pred eEEEECCCchHHHHHHHHHHH------CCCcEEEEECCCC
Confidence 5999996 9999999999999 8999999998764
No 497
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=94.53 E-value=0.076 Score=36.25 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=28.8
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAEV 63 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~~ 63 (182)
-++|.|| |-.|..+|..|++ .|.+|++++|....
T Consensus 24 ~vlITGas~gIG~~la~~l~~------~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKS------KSWNTISIDFRENP 58 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHH------TTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHH------CCCEEEEEeCCccc
Confidence 4888886 5689999999999 89999999998643
No 498
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=94.51 E-value=0.048 Score=40.46 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..|+|||.|..|..+|..|.. .|.+|+++|+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka------~Ga~Viv~D~~p 244 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRG------FGARVVVTEVDP 244 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHH------CCCEEEEECCCh
Confidence 469999999999999999988 899999999875
No 499
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=94.47 E-value=0.051 Score=40.51 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHhhhhcCCCceEEEEecCC
Q psy2240 23 ADVVIVGGGPAGMAAAIRLKQLAEKDGKELKVCLVEKAA 61 (182)
Q Consensus 23 ~dv~IIGgG~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~ 61 (182)
..++|||.|..|..+|..|.- .|.+|++.|+++
T Consensus 248 KTVgVIG~G~IGr~vA~~lra------fGa~Viv~d~dp 280 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAG------AGARVKVTEVDP 280 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHH------TTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHH------CCCEEEEEeCCc
Confidence 469999999999999999987 799999999875
No 500
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=94.44 E-value=0.081 Score=35.86 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=29.0
Q ss_pred cEEEECC-ChHHHHHHHHHHHhhhhcCCCceEEEEecCCC
Q psy2240 24 DVVIVGG-GPAGMAAAIRLKQLAEKDGKELKVCLVEKAAE 62 (182)
Q Consensus 24 dv~IIGg-G~~Gl~~A~~l~~~~~~~~~g~~v~vlE~~~~ 62 (182)
.++|.|| |..|..++..|++ .|.+|+++.|.+.
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~------~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLAR------AGHTVIGIDRGQA 36 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHH------TTCEEEEEESSSS
T ss_pred EEEEeCCCcHHHHHHHHHHHh------CCCEEEEEeCChh
Confidence 3889987 8899999999999 8999999998754
Done!