Query psy2242
Match_columns 246
No_of_seqs 281 out of 1356
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 19:48:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gmh_A Electron transfer flavo 100.0 4.3E-50 1.5E-54 390.8 21.6 237 7-246 269-584 (584)
2 3oz2_A Digeranylgeranylglycero 99.7 1.8E-17 6E-22 148.9 13.8 143 9-163 208-351 (397)
3 3nix_A Flavoprotein/dehydrogen 99.6 1.2E-14 4.1E-19 133.1 12.0 176 10-192 213-397 (421)
4 3cgv_A Geranylgeranyl reductas 99.5 4.2E-14 1.4E-18 127.9 13.0 142 10-163 209-351 (397)
5 3atr_A Conserved archaeal prot 99.5 3.4E-13 1.2E-17 126.1 16.8 142 10-163 215-356 (453)
6 3e1t_A Halogenase; flavoprotei 99.3 1.2E-12 4E-17 124.6 7.9 134 10-147 216-355 (512)
7 3i3l_A Alkylhalidase CMLS; fla 99.2 5.7E-12 2E-16 122.8 5.3 133 10-147 232-367 (591)
8 1k0i_A P-hydroxybenzoate hydro 98.8 1.4E-08 4.8E-13 92.1 11.2 133 21-162 216-350 (394)
9 3rp8_A Flavoprotein monooxygen 98.8 5.3E-09 1.8E-13 95.6 7.2 139 10-163 226-371 (407)
10 2x3n_A Probable FAD-dependent 98.8 1.1E-08 3.6E-13 93.2 8.0 81 79-163 280-360 (399)
11 2weu_A Tryptophan 5-halogenase 98.7 4.6E-08 1.6E-12 92.3 8.9 112 11-146 277-392 (511)
12 2e4g_A Tryptophan halogenase; 98.6 1.4E-07 4.8E-12 90.4 10.0 113 10-146 299-415 (550)
13 2aqj_A Tryptophan halogenase, 98.6 1E-07 3.5E-12 90.9 7.6 61 79-146 324-384 (538)
14 3c4a_A Probable tryptophan hyd 98.5 4.6E-07 1.6E-11 82.3 9.5 78 79-164 256-333 (381)
15 3alj_A 2-methyl-3-hydroxypyrid 98.5 2.8E-08 9.6E-13 90.1 1.1 61 79-146 275-335 (379)
16 3fmw_A Oxygenase; mithramycin, 98.4 2.7E-06 9.1E-11 82.3 12.4 140 13-163 249-395 (570)
17 2pyx_A Tryptophan halogenase; 98.4 1.3E-07 4.4E-12 90.0 3.1 62 80-147 340-401 (526)
18 2xdo_A TETX2 protein; tetracyc 98.3 1.1E-06 3.9E-11 80.0 8.6 55 86-145 315-369 (398)
19 3c96_A Flavin-containing monoo 98.3 1.4E-06 4.9E-11 79.6 8.3 61 79-146 297-357 (410)
20 3ihg_A RDME; flavoenzyme, anth 98.3 1.1E-05 3.8E-10 76.5 13.9 63 79-145 295-357 (535)
21 2qa1_A PGAE, polyketide oxygen 98.2 9.3E-06 3.2E-10 77.1 12.5 124 11-145 207-333 (500)
22 2qa2_A CABE, polyketide oxygen 98.2 1.3E-05 4.4E-10 76.0 12.8 63 79-145 272-334 (499)
23 1pn0_A Phenol 2-monooxygenase; 98.0 6.4E-05 2.2E-09 73.9 14.1 140 10-163 275-424 (665)
24 2dkh_A 3-hydroxybenzoate hydro 98.0 4.6E-05 1.6E-09 74.4 12.9 75 84-163 341-415 (639)
25 2vou_A 2,6-dihydroxypyridine h 98.0 7.4E-06 2.5E-10 74.6 6.0 77 79-163 293-369 (397)
26 4hb9_A Similarities with proba 97.9 5E-06 1.7E-10 74.6 4.0 64 79-145 305-368 (412)
27 3ihm_A Styrene monooxygenase A 97.9 3.4E-05 1.2E-09 71.4 9.5 58 80-144 302-360 (430)
28 2r0c_A REBC; flavin adenine di 97.6 9.4E-05 3.2E-09 70.8 6.7 63 79-145 303-365 (549)
29 3kkj_A Amine oxidase, flavin-c 97.5 4.2E-05 1.4E-09 61.8 3.2 37 83-125 293-329 (336)
30 3fpz_A Thiazole biosynthetic e 97.1 0.00016 5.5E-09 64.1 1.7 43 82-124 281-325 (326)
31 7fd1_A FD1, protein (7-Fe ferr 94.6 0.02 7E-07 42.5 3.0 29 206-234 30-58 (106)
32 1yvv_A Amine oxidase, flavin-c 93.7 0.038 1.3E-06 47.9 3.3 38 84-127 294-331 (336)
33 1jb0_C Photosystem I iron-sulf 93.5 0.014 4.9E-07 40.5 0.1 32 210-241 42-73 (80)
34 1xer_A Ferredoxin; electron tr 93.3 0.014 4.9E-07 42.8 -0.1 28 208-235 76-103 (103)
35 1dwl_A Ferredoxin I; electron 93.2 0.051 1.7E-06 35.1 2.6 26 207-232 31-58 (59)
36 2v2k_A Ferredoxin; iron, trans 93.1 0.057 1.9E-06 39.8 3.0 28 207-234 31-58 (105)
37 1dwl_A Ferredoxin I; electron 93.0 0.074 2.5E-06 34.3 3.2 26 207-233 1-26 (59)
38 1xer_A Ferredoxin; electron tr 92.5 0.047 1.6E-06 39.9 1.7 30 206-235 36-65 (103)
39 1h98_A Ferredoxin; electron tr 92.3 0.056 1.9E-06 37.7 1.8 28 207-234 31-58 (78)
40 2fdn_A Ferredoxin; electron tr 92.2 0.048 1.6E-06 35.2 1.3 26 207-232 29-54 (55)
41 3fbs_A Oxidoreductase; structu 91.5 0.19 6.7E-06 42.3 4.8 39 83-126 256-294 (297)
42 1dax_A Ferredoxin I; electron 91.4 0.052 1.8E-06 36.1 0.8 26 207-233 3-28 (64)
43 3eun_A Ferredoxin; electron tr 90.9 0.13 4.3E-06 36.2 2.5 24 209-232 2-25 (82)
44 1bc6_A 7-Fe ferredoxin; electr 90.8 0.052 1.8E-06 37.7 0.3 27 207-233 31-57 (77)
45 1rof_A Ferredoxin; electron tr 90.6 0.11 3.9E-06 33.5 1.9 25 207-232 2-26 (60)
46 1jb0_C Photosystem I iron-sulf 90.2 0.12 4E-06 35.7 1.8 28 207-234 2-29 (80)
47 1f2g_A Ferredoxin II; electron 90.1 0.05 1.7E-06 35.3 -0.2 23 208-232 2-24 (58)
48 4gcm_A TRXR, thioredoxin reduc 89.9 0.4 1.4E-05 41.2 5.3 40 82-125 268-307 (312)
49 2zvs_A Uncharacterized ferredo 89.8 0.17 5.6E-06 35.8 2.4 25 209-233 2-26 (85)
50 3eun_A Ferredoxin; electron tr 89.8 0.12 4.2E-06 36.3 1.6 29 206-234 28-62 (82)
51 1iqz_A Ferredoxin; iron-sulfer 89.7 0.096 3.3E-06 36.7 1.0 26 207-233 3-28 (81)
52 1sj1_A Ferredoxin; thermostabi 89.6 0.1 3.4E-06 34.5 1.0 27 206-233 2-28 (66)
53 3itj_A Thioredoxin reductase 1 89.3 0.34 1.2E-05 41.5 4.5 39 82-124 297-335 (338)
54 1rgv_A Ferredoxin; electron tr 89.3 0.13 4.5E-06 35.8 1.4 24 210-233 3-26 (80)
55 3mm5_B Sulfite reductase, diss 89.2 0.093 3.2E-06 47.9 0.8 27 206-232 232-258 (366)
56 3f8d_A Thioredoxin reductase ( 89.2 0.5 1.7E-05 40.1 5.4 42 82-125 277-318 (323)
57 2fdn_A Ferredoxin; electron tr 89.1 0.22 7.6E-06 31.9 2.4 25 208-233 2-26 (55)
58 4a5l_A Thioredoxin reductase; 88.9 0.51 1.8E-05 40.2 5.3 40 81-124 273-312 (314)
59 2fgo_A Ferredoxin; allochromat 88.8 0.16 5.6E-06 35.5 1.6 24 210-233 3-26 (82)
60 3i9v_9 NADH-quinone oxidoreduc 88.7 0.13 4.4E-06 41.3 1.2 28 207-234 90-117 (182)
61 1ryi_A Glycine oxidase; flavop 88.7 0.61 2.1E-05 41.0 5.7 96 10-120 256-360 (382)
62 1jnr_B Adenylylsulfate reducta 88.4 0.16 5.6E-06 40.4 1.6 28 207-234 39-66 (150)
63 3gyx_B Adenylylsulfate reducta 88.1 0.17 5.9E-06 41.0 1.6 29 206-234 37-65 (166)
64 1ti6_B Pyrogallol hydroxytrans 88.0 0.31 1.1E-05 42.7 3.3 31 206-236 90-120 (274)
65 4fk1_A Putative thioredoxin re 87.7 0.28 9.7E-06 42.2 2.8 42 81-126 261-302 (304)
66 3or1_B Sulfite reductase beta; 86.6 0.16 5.5E-06 46.7 0.6 26 206-231 249-274 (386)
67 3r9u_A Thioredoxin reductase; 85.8 0.92 3.1E-05 38.3 5.0 39 83-125 275-313 (315)
68 2vpz_B NRFC protein; oxidoredu 85.7 0.28 9.5E-06 40.7 1.6 30 206-235 81-110 (195)
69 4dgk_A Phytoene dehydrogenase; 85.7 0.43 1.5E-05 43.9 3.0 39 84-127 457-495 (501)
70 2fgo_A Ferredoxin; allochromat 85.5 0.3 1E-05 34.0 1.5 28 207-234 29-62 (82)
71 1trb_A Thioredoxin reductase; 85.3 0.77 2.6E-05 39.2 4.3 40 82-125 276-315 (320)
72 1f2g_A Ferredoxin II; electron 85.0 0.26 8.8E-06 31.8 0.8 28 206-233 29-58 (58)
73 1bc6_A 7-Fe ferredoxin; electr 84.6 0.52 1.8E-05 32.4 2.3 25 209-233 2-28 (77)
74 2ywl_A Thioredoxin reductase r 84.6 1.3 4.6E-05 34.6 5.1 40 82-125 133-172 (180)
75 3cty_A Thioredoxin reductase; 84.4 0.93 3.2E-05 38.8 4.4 38 83-124 279-316 (319)
76 1fl2_A Alkyl hydroperoxide red 84.0 1.6 5.3E-05 37.1 5.6 40 83-126 268-307 (310)
77 3or1_A Sulfite reductase alpha 83.9 0.26 8.9E-06 46.2 0.7 23 206-228 294-316 (437)
78 7fd1_A FD1, protein (7-Fe ferr 83.9 0.31 1.1E-05 35.8 1.0 25 209-233 2-28 (106)
79 3mm5_A Sulfite reductase, diss 82.8 0.3 1E-05 45.5 0.6 24 206-229 277-300 (418)
80 3lzw_A Ferredoxin--NADP reduct 82.7 1.1 3.7E-05 38.2 4.2 42 83-126 276-317 (332)
81 1vdc_A NTR, NADPH dependent th 82.4 1.6 5.3E-05 37.5 5.1 40 82-125 285-324 (333)
82 1rgv_A Ferredoxin; electron tr 82.0 0.41 1.4E-05 33.1 1.0 27 207-233 29-61 (80)
83 3i9v_9 NADH-quinone oxidoreduc 81.5 0.37 1.2E-05 38.5 0.6 24 211-234 49-72 (182)
84 1rof_A Ferredoxin; electron tr 81.4 0.27 9.1E-06 31.6 -0.2 22 212-233 38-59 (60)
85 1kqf_B FDH-N beta S, formate d 81.4 0.62 2.1E-05 41.1 2.1 29 206-234 124-152 (294)
86 2q7v_A Thioredoxin reductase; 81.4 1.9 6.6E-05 36.9 5.2 42 83-128 275-316 (325)
87 1h98_A Ferredoxin; electron tr 81.4 0.45 1.6E-05 32.8 1.0 25 209-233 2-28 (78)
88 2q0l_A TRXR, thioredoxin reduc 81.2 1.8 6.1E-05 36.7 4.9 38 83-124 272-309 (311)
89 2v2k_A Ferredoxin; iron, trans 80.6 0.49 1.7E-05 34.6 1.0 25 209-233 2-28 (105)
90 2a87_A TRXR, TR, thioredoxin r 78.3 2.5 8.4E-05 36.5 5.0 41 82-126 278-318 (335)
91 1hfe_L Protein (Fe-only hydrog 77.3 0.82 2.8E-05 42.3 1.6 25 208-232 58-83 (421)
92 1hfe_L Protein (Fe-only hydrog 76.9 0.68 2.3E-05 42.9 1.0 27 207-233 27-53 (421)
93 2cul_A Glucose-inhibited divis 76.6 1.5 5.3E-05 36.2 3.0 36 82-123 196-231 (232)
94 1q16_B Respiratory nitrate red 76.5 1.1 3.8E-05 42.8 2.3 30 206-235 208-237 (512)
95 2c42_A Pyruvate-ferredoxin oxi 76.4 0.83 2.8E-05 48.0 1.5 27 207-233 680-706 (1231)
96 1dax_A Ferredoxin I; electron 75.3 0.47 1.6E-05 31.2 -0.5 23 211-233 40-62 (64)
97 3i6d_A Protoporphyrinogen oxid 75.0 2.7 9.3E-05 37.7 4.4 34 84-123 435-468 (470)
98 2zvs_A Uncharacterized ferredo 74.7 0.71 2.4E-05 32.4 0.3 27 207-233 29-62 (85)
99 2ivf_B Ethylbenzene dehydrogen 73.9 1.4 4.6E-05 40.1 2.1 28 207-234 176-203 (352)
100 2zbw_A Thioredoxin reductase; 73.1 3.3 0.00011 35.4 4.3 41 83-125 278-318 (335)
101 3nlc_A Uncharacterized protein 72.1 2.1 7.3E-05 40.9 3.1 37 83-124 507-543 (549)
102 3lov_A Protoporphyrinogen oxid 71.9 2.3 7.8E-05 38.7 3.1 39 84-128 432-470 (475)
103 2jae_A L-amino acid oxidase; o 71.3 3.8 0.00013 37.4 4.5 37 84-124 450-486 (489)
104 4eqs_A Coenzyme A disulfide re 70.9 2.9 9.8E-05 38.3 3.6 40 81-120 265-309 (437)
105 1hyu_A AHPF, alkyl hydroperoxi 69.9 4.8 0.00016 37.7 5.0 39 83-125 479-517 (521)
106 1b37_A Protein (polyamine oxid 69.8 5.2 0.00018 36.4 5.1 42 85-129 423-464 (472)
107 1iqz_A Ferredoxin; iron-sulfer 69.6 1.1 3.9E-05 30.9 0.4 28 210-237 46-73 (81)
108 1h0h_B Formate dehydrogenase ( 69.4 1.4 4.9E-05 36.8 1.1 30 206-235 99-130 (214)
109 3h28_A Sulfide-quinone reducta 69.1 5.5 0.00019 35.9 5.1 44 83-126 285-335 (430)
110 3ab1_A Ferredoxin--NADP reduct 69.0 5.2 0.00018 34.7 4.7 40 83-124 289-328 (360)
111 3j16_B RLI1P; ribosome recycli 68.7 1.5 5.1E-05 42.6 1.2 27 206-232 46-72 (608)
112 3klj_A NAD(FAD)-dependent dehy 68.5 3.6 0.00012 37.0 3.7 39 81-120 254-292 (385)
113 3vrd_B FCCB subunit, flavocyto 68.5 7.4 0.00025 34.4 5.7 43 82-126 284-326 (401)
114 2gqw_A Ferredoxin reductase; f 68.3 3.1 0.00011 37.5 3.2 39 82-120 263-306 (408)
115 3lxd_A FAD-dependent pyridine 68.3 3.3 0.00011 37.2 3.3 39 82-120 275-319 (415)
116 3ntd_A FAD-dependent pyridine 68.3 3.2 0.00011 38.8 3.4 39 82-120 293-336 (565)
117 2bry_A NEDD9 interacting prote 68.1 3.2 0.00011 38.7 3.3 46 81-127 389-435 (497)
118 3h8l_A NADH oxidase; membrane 68.1 4.1 0.00014 36.3 3.9 40 83-125 298-337 (409)
119 3fg2_P Putative rubredoxin red 67.9 2.5 8.7E-05 37.9 2.5 39 82-120 265-308 (404)
120 3ef6_A Toluene 1,2-dioxygenase 67.7 3.3 0.00011 37.3 3.3 38 82-120 265-307 (410)
121 2ivd_A PPO, PPOX, protoporphyr 67.0 2.7 9.3E-05 38.1 2.5 35 84-124 440-474 (478)
122 2vdc_G Glutamate synthase [NAD 66.8 5.8 0.0002 36.7 4.8 39 82-125 407-445 (456)
123 1sez_A Protoporphyrinogen oxid 66.7 5.4 0.00018 36.5 4.5 35 84-124 460-494 (504)
124 3kd9_A Coenzyme A disulfide re 66.3 4.6 0.00016 36.7 3.9 39 82-120 270-313 (449)
125 3sx6_A Sulfide-quinone reducta 65.2 5.8 0.0002 35.9 4.4 44 83-126 296-346 (437)
126 4a9w_A Monooxygenase; baeyer-v 65.2 5.4 0.00019 33.9 4.0 39 82-124 312-352 (357)
127 2cdu_A NADPH oxidase; flavoenz 64.6 3.1 0.00011 37.9 2.4 38 83-120 273-315 (452)
128 2gag_B Heterotetrameric sarcos 64.3 22 0.00074 31.0 7.9 39 83-121 332-374 (405)
129 2e1m_C L-glutamate oxidase; L- 64.1 2.8 9.7E-05 33.9 1.9 35 85-123 118-152 (181)
130 3cgb_A Pyridine nucleotide-dis 63.5 5.1 0.00018 36.9 3.7 38 83-120 309-351 (480)
131 1y56_A Hypothetical protein PH 62.9 5.7 0.0002 36.8 3.9 35 83-123 342-376 (493)
132 1q1r_A Putidaredoxin reductase 62.5 4.4 0.00015 36.8 3.0 39 82-120 274-317 (431)
133 3ics_A Coenzyme A-disulfide re 62.2 5 0.00017 37.9 3.4 39 82-120 308-351 (588)
134 2yg5_A Putrescine oxidase; oxi 61.7 6.2 0.00021 35.4 3.9 37 84-123 415-451 (453)
135 2vpz_B NRFC protein; oxidoredu 61.4 7.8 0.00027 31.7 4.1 28 206-233 49-78 (195)
136 2bc0_A NADH oxidase; flavoprot 61.3 5.4 0.00019 36.8 3.5 38 83-120 317-359 (490)
137 3iwa_A FAD-dependent pyridine 60.3 5.8 0.0002 36.3 3.4 39 82-120 284-327 (472)
138 3oc4_A Oxidoreductase, pyridin 60.2 2.4 8.2E-05 38.7 0.8 39 82-120 269-312 (452)
139 2ivf_B Ethylbenzene dehydrogen 60.0 3 0.0001 37.9 1.3 29 206-234 142-172 (352)
140 3nrn_A Uncharacterized protein 59.9 4.7 0.00016 36.0 2.7 30 85-119 372-403 (421)
141 3l8k_A Dihydrolipoyl dehydroge 59.8 7.5 0.00026 35.5 4.1 35 82-121 298-332 (466)
142 1m6i_A Programmed cell death p 59.0 4.6 0.00016 37.5 2.5 37 84-120 310-350 (493)
143 3c8y_A Iron hydrogenase 1; dit 58.8 1.9 6.5E-05 41.5 -0.2 27 207-233 182-208 (574)
144 3qj4_A Renalase; FAD/NAD(P)-bi 58.7 3.9 0.00013 35.4 1.9 33 83-121 308-340 (342)
145 2c42_A Pyruvate-ferredoxin oxi 58.0 3.1 0.00011 43.7 1.3 27 207-233 736-764 (1231)
146 2vvm_A Monoamine oxidase N; FA 57.5 8.7 0.0003 35.0 4.1 38 84-124 449-486 (495)
147 3nks_A Protoporphyrinogen oxid 56.1 9.4 0.00032 34.4 4.1 32 84-121 441-472 (477)
148 1rsg_A FMS1 protein; FAD bindi 56.0 11 0.00036 34.9 4.5 40 84-126 471-510 (516)
149 3d1c_A Flavin-containing putat 55.8 7.3 0.00025 33.6 3.2 40 83-123 299-338 (369)
150 1nhp_A NADH peroxidase; oxidor 54.5 5.3 0.00018 36.3 2.1 38 83-120 272-314 (447)
151 3c8y_A Iron hydrogenase 1; dit 53.9 2.4 8.3E-05 40.7 -0.3 28 206-233 138-169 (574)
152 1gte_A Dihydropyrimidine dehyd 53.6 5.6 0.00019 40.7 2.3 25 208-233 980-1005(1025)
153 1s3e_A Amine oxidase [flavin-c 53.6 11 0.00038 34.7 4.2 37 85-124 419-455 (520)
154 1q16_B Respiratory nitrate red 52.9 5.8 0.0002 37.8 2.1 29 206-234 175-205 (512)
155 3i9v_3 NADH-quinone oxidoreduc 52.4 3.5 0.00012 41.1 0.5 26 206-231 172-201 (783)
156 1c0p_A D-amino acid oxidase; a 51.3 29 0.001 29.9 6.4 27 98-124 333-359 (363)
157 1kqf_B FDH-N beta S, formate d 50.3 10 0.00034 33.2 3.1 28 206-233 91-121 (294)
158 2qae_A Lipoamide, dihydrolipoy 50.2 13 0.00045 33.8 4.0 36 82-121 304-339 (468)
159 3o0h_A Glutathione reductase; 50.0 13 0.00045 34.1 4.0 35 82-121 316-350 (484)
160 2h88_B Succinate dehydrogenase 49.9 3.7 0.00013 35.0 0.2 24 207-230 150-173 (252)
161 2iid_A L-amino-acid oxidase; f 49.5 17 0.00057 33.1 4.6 38 84-125 449-486 (498)
162 2a8x_A Dihydrolipoyl dehydroge 49.3 14 0.00048 33.6 4.1 34 82-120 299-332 (464)
163 2gag_A Heterotetrameric sarcos 48.8 11 0.00038 38.2 3.6 37 82-124 408-444 (965)
164 3ic9_A Dihydrolipoamide dehydr 48.8 15 0.00051 33.9 4.2 35 82-121 303-337 (492)
165 1gte_A Dihydropyrimidine dehyd 48.8 16 0.00056 37.2 4.9 38 82-124 471-508 (1025)
166 4dna_A Probable glutathione re 48.7 14 0.00049 33.5 4.0 34 82-120 296-329 (463)
167 3urh_A Dihydrolipoyl dehydroge 48.5 13 0.00043 34.2 3.6 35 82-121 328-362 (491)
168 1xhc_A NADH oxidase /nitrite r 47.5 15 0.00052 32.5 3.9 38 82-120 258-295 (367)
169 3dk9_A Grase, GR, glutathione 47.4 16 0.00054 33.3 4.1 35 82-121 321-355 (478)
170 1qo8_A Flavocytochrome C3 fuma 47.3 13 0.00046 34.9 3.7 41 83-123 520-563 (566)
171 1dxl_A Dihydrolipoamide dehydr 45.9 17 0.00058 32.9 4.1 34 83-121 308-341 (470)
172 3vr8_B Iron-sulfur subunit of 45.3 5.7 0.0002 34.9 0.7 19 211-229 178-196 (282)
173 1y0p_A Fumarate reductase flav 44.8 11 0.00037 35.6 2.6 40 83-122 525-567 (571)
174 1fec_A Trypanothione reductase 44.6 18 0.00061 33.4 4.0 34 82-120 316-349 (490)
175 1v59_A Dihydrolipoamide dehydr 44.4 18 0.00063 32.8 4.1 35 82-121 315-349 (478)
176 3lad_A Dihydrolipoamide dehydr 44.1 20 0.00067 32.6 4.2 35 82-121 308-342 (476)
177 1ges_A Glutathione reductase; 44.0 19 0.00065 32.7 4.1 35 82-121 293-327 (450)
178 3hyw_A Sulfide-quinone reducta 43.8 27 0.00092 31.4 5.0 44 82-125 284-334 (430)
179 2hqm_A GR, grase, glutathione 43.6 19 0.00066 32.9 4.1 34 82-120 312-345 (479)
180 3k7m_X 6-hydroxy-L-nicotine ox 43.6 1.3E+02 0.0045 26.2 9.6 34 85-121 391-424 (431)
181 2wdq_B Succinate dehydrogenase 43.4 5.4 0.00018 33.4 0.2 25 206-230 140-164 (238)
182 1zk7_A HGII, reductase, mercur 43.4 21 0.00072 32.4 4.3 35 82-121 299-333 (467)
183 1kf6_A Fumarate reductase flav 43.0 19 0.00066 34.4 4.1 44 81-124 369-416 (602)
184 2bs2_A Quinol-fumarate reducta 42.6 20 0.00069 34.8 4.2 44 81-124 382-429 (660)
185 2wpf_A Trypanothione reductase 42.2 20 0.00069 33.1 4.0 34 82-120 320-353 (495)
186 1d4d_A Flavocytochrome C fumar 42.2 20 0.00068 33.9 4.0 40 83-122 526-568 (572)
187 1ojt_A Surface protein; redox- 42.2 19 0.00067 32.9 3.9 35 82-121 314-348 (482)
188 1chu_A Protein (L-aspartate ox 41.9 19 0.00064 33.9 3.8 44 81-124 364-411 (540)
189 2eq6_A Pyruvate dehydrogenase 41.7 20 0.0007 32.6 3.9 34 82-120 299-332 (464)
190 2i0z_A NAD(FAD)-utilizing dehy 41.6 18 0.00063 32.7 3.6 40 83-123 403-443 (447)
191 1ebd_A E3BD, dihydrolipoamide 41.3 21 0.00071 32.3 3.9 33 83-120 299-331 (455)
192 3dgh_A TRXR-1, thioredoxin red 41.2 24 0.00082 32.2 4.3 34 82-120 316-350 (483)
193 1zmd_A Dihydrolipoyl dehydroge 40.9 21 0.00073 32.4 3.9 35 82-121 310-344 (474)
194 2r9z_A Glutathione amide reduc 40.2 23 0.00079 32.3 4.0 33 83-120 293-325 (463)
195 3dgz_A Thioredoxin reductase 2 39.4 25 0.00086 32.2 4.1 35 82-120 316-350 (488)
196 1cjc_A Protein (adrenodoxin re 39.4 19 0.00066 33.0 3.4 39 84-127 359-398 (460)
197 1kf6_B Fumarate reductase iron 38.7 4.5 0.00015 34.0 -1.0 23 208-230 141-163 (243)
198 4gde_A UDP-galactopyranose mut 38.5 21 0.00073 32.2 3.5 39 81-121 439-477 (513)
199 1mo9_A ORF3; nucleotide bindin 38.3 25 0.00085 32.7 4.0 34 82-120 343-376 (523)
200 2bs2_B Quinol-fumarate reducta 37.8 4.1 0.00014 34.2 -1.4 23 208-230 144-166 (241)
201 2z3y_A Lysine-specific histone 37.5 26 0.00089 33.7 4.1 37 85-124 623-659 (662)
202 1xdi_A RV3303C-LPDA; reductase 37.0 27 0.00091 32.1 3.9 34 82-120 307-340 (499)
203 3qfa_A Thioredoxin reductase 1 36.9 29 0.00098 32.2 4.2 34 82-120 344-378 (519)
204 2wdq_B Succinate dehydrogenase 35.9 7.2 0.00025 32.6 -0.2 19 211-229 202-220 (238)
205 4g6h_A Rotenone-insensitive NA 35.1 30 0.001 32.2 3.9 37 83-122 363-399 (502)
206 2v3a_A Rubredoxin reductase; a 34.9 29 0.00098 30.5 3.7 38 82-120 267-304 (384)
207 1kf6_B Fumarate reductase iron 34.0 7.9 0.00027 32.4 -0.2 18 211-228 200-217 (243)
208 4gut_A Lysine-specific histone 34.0 25 0.00084 35.0 3.3 36 83-121 740-775 (776)
209 2e5v_A L-aspartate oxidase; ar 33.9 13 0.00044 34.3 1.2 41 81-121 326-370 (472)
210 1rp0_A ARA6, thiazole biosynth 33.2 16 0.00053 31.0 1.5 45 83-127 232-278 (284)
211 1lvl_A Dihydrolipoamide dehydr 32.7 34 0.0012 31.0 3.8 33 83-120 296-328 (458)
212 2yqu_A 2-oxoglutarate dehydrog 31.7 40 0.0014 30.4 4.1 34 83-121 293-326 (455)
213 1onf_A GR, grase, glutathione 31.6 35 0.0012 31.3 3.8 38 83-120 303-369 (500)
214 1lqt_A FPRA; NADP+ derivative, 31.5 27 0.00093 32.0 3.0 39 84-126 351-389 (456)
215 2x8g_A Thioredoxin glutathione 30.6 40 0.0014 31.7 4.0 36 82-121 423-458 (598)
216 2h88_B Succinate dehydrogenase 30.6 9.9 0.00034 32.2 -0.2 18 211-228 211-228 (252)
217 3bk7_A ABC transporter ATP-bin 30.0 15 0.00052 35.4 1.0 25 206-230 60-84 (607)
218 1y56_B Sarcosine oxidase; dehy 29.5 77 0.0026 27.2 5.5 37 85-121 313-354 (382)
219 3ayj_A Pro-enzyme of L-phenyla 29.4 40 0.0014 33.3 3.9 41 84-128 644-684 (721)
220 3gyx_A Adenylylsulfate reducta 29.0 45 0.0016 32.3 4.2 43 81-126 449-491 (662)
221 2pa8_D DNA-directed RNA polyme 28.9 15 0.00051 31.5 0.7 24 208-232 196-219 (265)
222 2h88_A Succinate dehydrogenase 28.0 34 0.0012 33.0 3.1 42 83-124 388-433 (621)
223 4at0_A 3-ketosteroid-delta4-5a 27.6 35 0.0012 31.5 3.0 38 83-120 467-507 (510)
224 3vr8_B Iron-sulfur subunit of 27.5 18 0.0006 31.7 0.9 18 211-228 235-252 (282)
225 3k30_A Histamine dehydrogenase 27.0 30 0.001 33.4 2.5 35 84-124 641-675 (690)
226 2bs2_B Quinol-fumarate reducta 26.9 12 0.00042 31.2 -0.2 18 211-228 204-221 (241)
227 2wdq_A Succinate dehydrogenase 26.4 38 0.0013 32.2 3.1 43 83-125 379-425 (588)
228 3i9v_3 NADH-quinone oxidoreduc 26.3 18 0.00063 35.8 0.9 21 214-234 219-239 (783)
229 1o94_A Tmadh, trimethylamine d 26.0 30 0.001 33.8 2.3 34 84-123 666-699 (729)
230 2xag_A Lysine-specific histone 25.9 55 0.0019 32.9 4.2 38 85-125 794-831 (852)
231 3cf4_A Acetyl-COA decarboxylas 23.1 13 0.00044 37.4 -1.0 22 209-230 449-470 (807)
232 2gf3_A MSOX, monomeric sarcosi 22.7 1.5E+02 0.0051 25.3 6.0 38 84-121 321-363 (389)
233 1ps9_A 2,4-dienoyl-COA reducta 22.3 54 0.0018 31.4 3.3 33 83-119 639-671 (671)
234 3g3e_A D-amino-acid oxidase; F 22.1 2.2E+02 0.0075 24.0 7.0 29 99-127 310-338 (351)
235 3mm5_B Sulfite reductase, diss 22.1 13 0.00044 33.5 -1.1 27 207-233 199-228 (366)
236 4b1b_A TRXR, thioredoxin reduc 22.0 80 0.0027 29.7 4.4 37 81-121 347-383 (542)
237 1h0h_B Formate dehydrogenase ( 22.0 28 0.00096 28.7 1.1 28 206-233 63-95 (214)
238 1ti6_B Pyrogallol hydroxytrans 21.2 37 0.0013 29.3 1.7 27 206-233 59-87 (274)
239 1fu9_A U-shaped transcriptiona 20.7 23 0.00078 21.5 0.2 9 216-224 9-17 (36)
240 2imh_A Hypothetical protein UN 20.1 2.4E+02 0.0083 23.8 6.5 91 25-126 38-153 (231)
No 1
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=4.3e-50 Score=390.84 Aligned_cols=237 Identities=69% Similarity=1.276 Sum_probs=211.9
Q ss_pred CCCCeEEEEEeCCCCCeEEEEEEEccCCCCCCCCHHHHHHHHhcCCCccccccCCeEeeecceeeecCCCccCCccccCC
Q psy2242 7 NTYGGSFLYHLNEPSPLVAVGFVVGLDYTNPYLSPFKEFQRFKTHPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPG 86 (246)
Q Consensus 7 ~~~GgGwiy~~~l~~~~vsVGlv~~l~~~~~~~~p~~~l~~~k~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G 86 (246)
.++||+|+|+.+.++++++||+++..++.++..+++++|++|++||.++++|++++.++|+++.++.++++.+|+++.+|
T Consensus 269 ~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~r 348 (584)
T 2gmh_A 269 HTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPFREFQRWKHHPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPG 348 (584)
T ss_dssp TSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHHHHHHHHTTSTTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEETT
T ss_pred CcCCceEEEEecCCCCeEEEEEEEecCcccccCChHHHHHHHHhChHHHHHhCCCeEEEecceEccCCCcccCCccccCC
Confidence 46789999987632689999999988877777789999999999999999999999999999999999998889999999
Q ss_pred EEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCC-CCCCCCCc---hHHHHHHHHHhhchHHHHHHHhhhhhh
Q psy2242 87 GCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAG-DEVSTGLE---PKSYEDKIKSSWIYKELKEVRNCRPSF 162 (246)
Q Consensus 87 ~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd-~s~~~~~~---L~~Y~~~~~~s~~~~el~~~r~~~~~~ 162 (246)
++||||||++++|+.++|+++||++|+++|+++.++++.++ .. .++ |+.|++.++++|+.+||+.+|+++++|
T Consensus 349 v~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~---~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~ 425 (584)
T 2gmh_A 349 GLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQS---KTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSC 425 (584)
T ss_dssp EEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCC---SSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGG
T ss_pred EEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcch---hhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHH
Confidence 99999999999999999999999999999999999997664 32 133 899999999999999999999999999
Q ss_pred hhccccHHHHHHHHH-HHHhcCCCCcccccC-------------------------------------------------
Q psy2242 163 HSKLGLWGGLAYSGA-SIMMKGIEPWTFKWN------------------------------------------------- 192 (246)
Q Consensus 163 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~------------------------------------------------- 192 (246)
++.||.|++++++++ +|+.+|+.||||+|.
T Consensus 426 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hl~ 505 (584)
T 2gmh_A 426 HGILGVYGGMIYTGIFYWIFRGMEPWTLKHKGSDSDQLKPAKDCTPIEYPKPDGQISFDLLSSVALSGTNHEHDQPAHLT 505 (584)
T ss_dssp GSTTTHHHHHHHHHHHTTTTTTCCSCCCCCCSCGGGCCCCGGGSCCCCCCCCCSSSSCCHHHHHHTTTCBCCSSSCCSEE
T ss_pred HHhhccHHHHHHHHHHHHHcCCCCCCccCCCCCCchhhhhHHhcCCCCCCCccccccccccchhhhccccccCCCCCeEE
Confidence 855699999999999 788889999999875
Q ss_pred -------------------------ceEEEEeCCCCCccceEEecccccccccccccCCCCCceeeCCCCCCCCCCCCC
Q psy2242 193 -------------------------SVYEYVPLEDGSGERLQINAQNCIHCKTCDIKDPTQNINWVVPEGGGGPAYNGM 246 (246)
Q Consensus 193 -------------------------~vy~~~~~~~~~~~~~~i~~~nc~~c~~c~i~~p~~~i~w~~p~gg~g~~y~~~ 246 (246)
+|||+++++++...+++||++||||||||+|+||++||+|++||||+||+|++|
T Consensus 506 ~~d~~~~~~~~~~~~~~~c~~~CPa~~~~~~~~~~~~~~~~~i~~~~Ci~C~~C~~~cp~~~i~~~~p~gg~g~~~~~~ 584 (584)
T 2gmh_A 506 LKDDSVPVNRNLSIYDGPEQRFCPAGVYEFVPLEQGDGFRLQINAQNCVHCKTCDIKDPSQNINWVVPEGGGGPAYNGM 584 (584)
T ss_dssp ESSTTHHHHTHHHHHCCTHHHHCTTCCEEEEECSSTTCEEEEECGGGCCCCCHHHHHCTTCCEEECCCSTTCBCCCSCC
T ss_pred EcCcccchhhchhhhcchhhhcCChhhEEEeecCCCCceEEEEeCCCCcCCCCchhhCCCCCceeECCCCCCCcCccCC
Confidence 999997543321238999999999999999999999999999999999999998
No 2
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.74 E-value=1.8e-17 Score=148.88 Aligned_cols=143 Identities=22% Similarity=0.300 Sum_probs=110.8
Q ss_pred CCeEEEEEeCCCCCeEEEEEEEccCCCCCCCCHHHHHHHHh-cCCCccccccCCeEeeecceeeecCCCccCCccccCCE
Q psy2242 9 YGGSFLYHLNEPSPLVAVGFVVGLDYTNPYLSPFKEFQRFK-THPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPGG 87 (246)
Q Consensus 9 ~GgGwiy~~~l~~~~vsVGlv~~l~~~~~~~~p~~~l~~~k-~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G~ 87 (246)
.|+.|+++.. ++.++||++...+......++.+.++++. .+|. +..++.++.-.+.+|..... .+.+.+|+
T Consensus 208 ~g~~~~~~~~--~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~~----l~~~~~~~~~~~~~~~~~~~--~~~~~~~v 279 (397)
T 3oz2_A 208 AGYIWVFPKG--EGMANVGIGSSINWIHNRFELKNYLDRFIENHPG----LKKGQDIQLVTGGVSVSKVK--MPITMPGL 279 (397)
T ss_dssp TEEEEEEEEE--TTEEEEEEEEETTTSCSHHHHHHHHHHHHHTCHH----HHTSEEEEEEEEEEECCCCC--SCCEETTE
T ss_pred CceEEEeecc--cceeEEEEeeccchhhhhhhHHHHHHHHHHhCcc----ccccceeeeeeccccccCcc--cceeeeeE
Confidence 3667777777 89999999987765444445667777764 5554 34566666667777775543 36789999
Q ss_pred EEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhhhhhh
Q psy2242 88 CLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCRPSFH 163 (246)
Q Consensus 88 llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~~~~~ 163 (246)
+||||||++++|++++||++||.||++||++|.++++.++.++ +.|+.|++.++++|. ++......+++.|.
T Consensus 280 ~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~---~~L~~Ye~~~~~~~~-~~~~~~~~~~~~~~ 351 (397)
T 3oz2_A 280 MLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSP---QMMQKYEKLIKERFE-RKHLRNWVAKEKLA 351 (397)
T ss_dssp EECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred EEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999863 689999999999875 44545555555553
No 3
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.57 E-value=1.2e-14 Score=133.15 Aligned_cols=176 Identities=15% Similarity=0.144 Sum_probs=121.8
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCC-CCCCCCHHHHHHHHh-cCCCccccccCCeEeeecceeeecCCCccCCccccCCE
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDY-TNPYLSPFKEFQRFK-THPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPGG 87 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~-~~~~~~p~~~l~~~k-~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G~ 87 (246)
++||+|..++++++++||++...+. .....++.+.++++. .+|.+.+++++.+.. ...+.++..... .++.+.+++
T Consensus 213 ~~g~~~~~P~~~~~~~vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~-~~~~~~~~~~~~-~~~~~~~~v 290 (421)
T 3nix_A 213 PKVWIWVIPFSNGNTSVGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFL-FEPRTIEGYAIS-ASKLYGDGF 290 (421)
T ss_dssp TTEEEEEEECTTSEEEEEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBS-SCCEEEECCCBE-ESCSEETTE
T ss_pred CCEEEEEEEECCCCEEEEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccc-cCceeeccccee-eeeeccCCE
Confidence 5667777777799999999987654 222346788888774 679888888876554 233444432222 457889999
Q ss_pred EEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhc-hHHH---HHHHhhhhhhh
Q psy2242 88 CLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWI-YKEL---KEVRNCRPSFH 163 (246)
Q Consensus 88 llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~-~~el---~~~r~~~~~~~ 163 (246)
++|||||++++|++++|+++||.+|.++|++|.++++.++. +.++.|.+.++..+- .+++ ....++..++.
T Consensus 291 ~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~-----~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (421)
T 3nix_A 291 VLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEV-----NWEKDFVEHMMQGIDTFRSFVTGWYDGTLHAVFF 365 (421)
T ss_dssp EECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCC-----CHHHHTHHHHHHHHHHHHHHHHHHHHSHHHHHHT
T ss_pred EEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCch-----hHHHHHHHHHHHHHHHHHHHHHHHcchhhhhhhh
Confidence 99999999999999999999999999999999999865442 357778887765321 1111 11123333332
Q ss_pred h--ccccHHHHHHHHH-HHHhcCCCCcccccC
Q psy2242 164 S--KLGLWGGLAYSGA-SIMMKGIEPWTFKWN 192 (246)
Q Consensus 164 ~--~~~~~~~~~~~~~-~~~~~g~~~~~~~~~ 192 (246)
. +.-.+..++.+.+ .++.+...||..++.
T Consensus 366 ~~~~~~~~~~~i~~~l~g~~~~~~~p~~~~~~ 397 (421)
T 3nix_A 366 AKNPDPDHKRMICSVLAGYVWDKNNPFVKKHN 397 (421)
T ss_dssp CSSCCHHHHHHHHHHHTTCTTCTTSHHHHTHH
T ss_pred CcCCChhHHHHHHHHhhhhhcCCCCccccchH
Confidence 1 2334567777777 677888889876654
No 4
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.54 E-value=4.2e-14 Score=127.93 Aligned_cols=142 Identities=22% Similarity=0.283 Sum_probs=109.3
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCCCCCCCCHHHHHHHHhc-CCCccccccCCeEeeecceeeecCCCccCCccccCCEE
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDYTNPYLSPFKEFQRFKT-HPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPGGC 88 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~~~~~~~p~~~l~~~k~-hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G~l 88 (246)
|..|++|.. +++++||++...+......++.+.++++.. +| .+..++.++.....+|..+. .++.+.++++
T Consensus 209 g~~~~~P~~--~~~~~vg~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~p~~~~--~~~~~~~~v~ 280 (397)
T 3cgv_A 209 GYIWVFPKG--EGMANVGIGSSINWIHNRFELKNYLDRFIENHP----GLKKGQDIQLVTGGVSVSKV--KMPITMPGLM 280 (397)
T ss_dssp EEEEEEEEE--TTEEEEEEEEETTTCSCHHHHHHHHHHHHHTCH----HHHTSEEEEEEEEEEECCCC--CSCCEETTEE
T ss_pred ceEEEEECC--CCeEEEEEEeccccccCCCCHHHHHHHHHHhCc----CCCCCeEEeeeeeeeecCCC--ccceeeCCEE
Confidence 344555555 889999998866432222346667777653 33 23456666666777887554 4678899999
Q ss_pred EeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhhhhhh
Q psy2242 89 LVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCRPSFH 163 (246)
Q Consensus 89 lVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~~~~~ 163 (246)
+|||||++++|++++|+++||.+|..+|+++.+++..++.+ ...|+.|++.+++. +.++++..+.+..++.
T Consensus 281 liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~---~~~l~~Y~~~~~~~-~~~~~~~~~~~~~~~~ 351 (397)
T 3cgv_A 281 LVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYS---PQMMQKYEKLIKER-FERKHLRNWVAKEKLA 351 (397)
T ss_dssp ECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCS---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHT
T ss_pred EEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCcc---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999877765 36799999999876 5788888888888775
No 5
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.51 E-value=3.4e-13 Score=126.07 Aligned_cols=142 Identities=15% Similarity=0.125 Sum_probs=102.1
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCCCCCCCCHHHHHHHHhcCCCccccccCCeEeeecceeeecCCCccCCccccCCEEE
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDYTNPYLSPFKEFQRFKTHPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPGGCL 89 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~~~~~~~p~~~l~~~k~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G~ll 89 (246)
|+.|+||.. +++++||+++..+. ...++.+.++++... +.+.+.+.+.++.....+|..+ .+++.+.++++|
T Consensus 215 g~~~~~P~~--~~~~~vg~~~~~~~--~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~~~v~l 286 (453)
T 3atr_A 215 GYWWYFPKG--KNKVNVGLGIQGGM--GYPSIHEYYKKYLDK--YAPDVDKSKLLVKGGALVPTRR--PLYTMAWNGIIV 286 (453)
T ss_dssp SCEEEEEEE--TTEEEEEEEEESSS--CCCCHHHHHHHHHHH--HCTTEEEEEEEEEEEEEEECSS--CCSCSEETTEEE
T ss_pred cEEEEEECC--CCeEEEEEEecCCC--CCCCHHHHHHHHHHh--hhhhcCCCeEEeccceeccCCC--CCCceecCCEEE
Confidence 556777776 88999999876442 123455555554311 1122333355554445667633 256788999999
Q ss_pred eccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhhhhhh
Q psy2242 90 VGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCRPSFH 163 (246)
Q Consensus 90 VGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~~~~~ 163 (246)
|||||++++|++++|+.+||.+|..+|+++.++++.++.+ .+.|+.|++.+++. +.+.++..+.++.++.
T Consensus 287 vGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~---~~~L~~Y~~~r~~~-~~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 287 IGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFS---ASGLWDMNICYVNE-YGAKQASLDIFRRFLQ 356 (453)
T ss_dssp CGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCS---TTTTTHHHHHHHHH-THHHHHHHHHHHHHHT
T ss_pred EeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCcc---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877764 36899999999876 4566776666666553
No 6
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.34 E-value=1.2e-12 Score=124.61 Aligned_cols=134 Identities=18% Similarity=0.206 Sum_probs=97.3
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCCCCC-CCCHHHHHHHH-hcCCCccccccCCeEeee-cceeee---cCCCccCCccc
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDYTNP-YLSPFKEFQRF-KTHPAVRPVFEGGKRIAY-GARALN---EGGLQAIPRLT 83 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~~~~-~~~p~~~l~~~-k~hP~i~~~L~gg~~i~y-~a~~ip---~gg~~~~pkl~ 83 (246)
++||+|.+++++++++||+++..+.... ..++.+.++++ +.+|.+.+++...+.+.. ....++ ...+. .++.+
T Consensus 216 ~~G~~~~~Pl~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~-~~~~~ 294 (512)
T 3e1t_A 216 QDGWFWYIPLSDTLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYC-NTSFW 294 (512)
T ss_dssp TTEEEEEEECSSSEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEE-ESCSB
T ss_pred CCceEEEEEeCCCeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeecccccc-ccccc
Confidence 5677777777789999999987654222 23577778776 577888888877765421 111121 11112 45788
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhh
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSW 147 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~ 147 (246)
.++++||||||++++|++++|+++||+++.++|+++.++++ ++.+. ...|+.|++.+++.+
T Consensus 295 ~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~-~~~~~--~~aL~~Ye~~~~~~~ 355 (512)
T 3e1t_A 295 KNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLA-GEMSE--QRCFEEFERRYRREY 355 (512)
T ss_dssp CSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTT-TCSCH--HHHHHHHHHHHHHHH
T ss_pred cCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHc-CCccH--HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998875 33221 245789999988753
No 7
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.22 E-value=5.7e-12 Score=122.82 Aligned_cols=133 Identities=14% Similarity=0.155 Sum_probs=98.0
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCCCC--CCCCHHHHHHHHh-cCCCccccccCCeEeeecceeeecCCCccCCccccCC
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDYTN--PYLSPFKEFQRFK-THPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPG 86 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~~~--~~~~p~~~l~~~k-~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G 86 (246)
.+||+|.++++++.++|++++..+... ...++.++++++. .+|.+.+.+++++.+. ..+.++...+. .++.+.++
T Consensus 232 ~~G~~w~iPl~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~-~~~~~~~~~~~-~~~~~~~r 309 (591)
T 3i3l_A 232 EDGWVWMIPIKDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVD-EVRIVQDWSYD-TEVFSADR 309 (591)
T ss_dssp TTEEEEEEECSSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECS-CCEEEEEEEEE-ESCSEETT
T ss_pred CCcEEEEEECCCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCcccc-CceEecccccc-hhhcccCC
Confidence 467777777779999999988664311 1134566676664 5677777887776543 23444433333 35788999
Q ss_pred EEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhh
Q psy2242 87 GCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSW 147 (246)
Q Consensus 87 ~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~ 147 (246)
+++|||||++++|+.++|+++|+.+|..+|+++.+++..++.. ...++.|++.++..|
T Consensus 310 vvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~---~~al~~Y~~~~~~~~ 367 (591)
T 3i3l_A 310 FFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEK---DAVHAWYNRTYREAY 367 (591)
T ss_dssp EEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGH---HHHHHHHHHHHHHHH
T ss_pred EEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchH---HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998755432 246788998887653
No 8
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.85 E-value=1.4e-08 Score=92.11 Aligned_cols=133 Identities=14% Similarity=0.024 Sum_probs=81.5
Q ss_pred CCeEEEEEEEccCCCCCCCCHHHHHHHHhcC-CC-ccccccCCeEeeecceeeecCCCccCCccccCCEEEeccCccCCC
Q psy2242 21 SPLVAVGFVVGLDYTNPYLSPFKEFQRFKTH-PA-VRPVFEGGKRIAYGARALNEGGLQAIPRLTFPGGCLVGCTAGFLN 98 (246)
Q Consensus 21 ~~~vsVGlv~~l~~~~~~~~p~~~l~~~k~h-P~-i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G~llVGDAAG~vd 98 (246)
++..++.+.+..+......++.+.++.+.+. +. +...+..+..+.. ...|...+. .++...++++||||||..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~grv~LvGDAAh~~~ 292 (394)
T 1k0i_A 216 ATRSQYYVQVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLEK--SIAPLRSFV-VEPMQHGRLFLAGDAAHIVP 292 (394)
T ss_dssp TTEEEEEEEECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEEE--EEEEEEEEE-EECSEETTEEECGGGTEECC
T ss_pred CCcEEEEEEeCCCCCccccCHHHHHHHHHHhhCcccccccccCcceee--EEEEhhhhh-ccccccCCEEEEechhhcCC
Confidence 5777877765432111123444445555422 11 1112222222221 222322222 24567899999999999999
Q ss_pred CcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhhhhh
Q psy2242 99 VPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCRPSF 162 (246)
Q Consensus 99 p~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~~~~ 162 (246)
|+.++|+++||.++..+|+++.+++..++. ..|+.|++..+.. ..+-.+..+.+..++
T Consensus 293 P~~GqG~~~ai~da~~La~~L~~~~~~~~~-----~~L~~Y~~~r~~~-~~~~~~~s~~~~~~~ 350 (394)
T 1k0i_A 293 PTGAKGLNLAASDVSTLYRLLLKAYREGRG-----ELLERYSAICLRR-IWKAERFSWWMTSVL 350 (394)
T ss_dssp GGGTCHHHHHHHHHHHHHHHHHHHHHHCCG-----GGGGGHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhccCch-----HHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 999999999999999999999988865432 5899999987653 333344444444444
No 9
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.81 E-value=5.3e-09 Score=95.62 Aligned_cols=139 Identities=13% Similarity=0.050 Sum_probs=86.8
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCCCCC--CCCHHHHH-HHHhc-CCCccccccCCe---EeeecceeeecCCCccCCcc
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDYTNP--YLSPFKEF-QRFKT-HPAVRPVFEGGK---RIAYGARALNEGGLQAIPRL 82 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~~~~--~~~p~~~l-~~~k~-hP~i~~~L~gg~---~i~y~a~~ip~gg~~~~pkl 82 (246)
|..|+|+.+ ++++.+.+.+..+...+ .....+.+ +.|.. +|.+.++++... .+......++. .++.
T Consensus 226 ~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 298 (407)
T 3rp8_A 226 KQVSLMPVS--AGRFYFFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEP-----FSRL 298 (407)
T ss_dssp EEEEEEEET--TTEEEEEEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCC-----CSCC
T ss_pred cEEEEEEcC--CCeEEEEEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCC-----CCce
Confidence 344555555 89988888775432111 11222223 33332 344444443221 11111122111 2577
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhhhhh
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCRPSF 162 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~~~~ 162 (246)
+.++++||||||.+++|+.++|+.+||.++..+|+++.++ ++. ...|+.|++..+.. ..+-++..+.+..++
T Consensus 299 ~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~---~~~----~~~l~~Y~~~r~~~-~~~~~~~s~~~~~~~ 370 (407)
T 3rp8_A 299 VRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQT---RDI----AAALREYEAQRCDR-VRDLVLKARKRCDIT 370 (407)
T ss_dssp EETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSC---CCH----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred ecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcC---CCH----HHHHHHHHHHHHHH-HHHHHHHHHHhhhhh
Confidence 8899999999999999999999999999999999998742 221 25789999988764 445567777777777
Q ss_pred h
Q psy2242 163 H 163 (246)
Q Consensus 163 ~ 163 (246)
+
T Consensus 371 ~ 371 (407)
T 3rp8_A 371 H 371 (407)
T ss_dssp T
T ss_pred h
Confidence 5
No 10
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.78 E-value=1.1e-08 Score=93.22 Aligned_cols=81 Identities=14% Similarity=-0.002 Sum_probs=65.6
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhh
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNC 158 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~ 158 (246)
.++.+.++++||||||++++|+.++|+++||.+|..+|+++.++++.++.. ...|+.|++..+.. ..+-++..+.+
T Consensus 280 ~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~---~~~l~~Y~~~r~~~-~~~~~~~s~~~ 355 (399)
T 2x3n_A 280 LDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACAL---EDALAGYQAERFPV-NQAIVSYGHAL 355 (399)
T ss_dssp CSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCH---HHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred ccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchH---HHHHHHHHHHhccH-HHHHHHHHHHh
Confidence 456788999999999999999999999999999999999999888644211 24789999988764 34556667777
Q ss_pred hhhhh
Q psy2242 159 RPSFH 163 (246)
Q Consensus 159 ~~~~~ 163 (246)
..+|.
T Consensus 356 ~~~~~ 360 (399)
T 2x3n_A 356 ATSLE 360 (399)
T ss_dssp HHHTT
T ss_pred hhhhc
Confidence 77775
No 11
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.67 E-value=4.6e-08 Score=92.30 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=72.2
Q ss_pred eEEEEEeCCCCCeEEEEEEEccCCCCCCCCHHHHHHHHh----cCCCccccccCCeEeeecceeeecCCCccCCccccCC
Q psy2242 11 GSFLYHLNEPSPLVAVGFVVGLDYTNPYLSPFKEFQRFK----THPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPG 86 (246)
Q Consensus 11 gGwiy~~~l~~~~vsVGlv~~l~~~~~~~~p~~~l~~~k----~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G 86 (246)
.||+|..++++ .+++|++...+ ..++.+..+.++ ..|. +...+.+... .++ .++...++
T Consensus 277 ~g~~~~~P~~~-~~~~g~~~~~~----~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~------~~~--~~~~~~~r 339 (511)
T 2weu_A 277 AGWMWTIPLFK-RDGNGYVYSDE----FISPEEAERELRSTVAPGRD----DLEANHIQMR------IGR--NERTWINN 339 (511)
T ss_dssp TEEEEEEECSS-EEEEEEEECTT----TSCHHHHHHHHHHHHCTTCT----TSCCEEEECC------CEE--ESCSEETT
T ss_pred CCcEEEEECCC-ceEEEEEECCC----CCCHHHHHHHHHHHhCcccc----cccceeEEee------ccc--cccccCCC
Confidence 45666665544 78888876432 234444444443 2232 2222333211 122 34677899
Q ss_pred EEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHh
Q psy2242 87 GCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSS 146 (246)
Q Consensus 87 ~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s 146 (246)
++||||||++++|+.++|+++||.+|..+|+++.+ ++.. ...|+.|++.++..
T Consensus 340 v~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~----~~~~---~~~l~~Y~~~~~~~ 392 (511)
T 2weu_A 340 CVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG----ERWD---PVLISAYNERMAHM 392 (511)
T ss_dssp EEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC----TTCC---HHHHHHHHHHHHHH
T ss_pred EEEEechhhccCccccccHHHHHHHHHHHHHHhcc----CCCC---HHHHHHHHHHHHHH
Confidence 99999999999999999999999999998887642 2322 24688999988754
No 12
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.59 E-value=1.4e-07 Score=90.45 Aligned_cols=113 Identities=11% Similarity=0.123 Sum_probs=72.2
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCCCCCCCCHHHHHHHHh----cCCCccccccCCeEeeecceeeecCCCccCCccccC
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDYTNPYLSPFKEFQRFK----THPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFP 85 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~~~~~~~p~~~l~~~k----~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~ 85 (246)
.+||+|..++++ .+.+|++...++ .++.+..+.|. ..|. +...+.+.+. .++ .++...+
T Consensus 299 ~~g~~~~ipl~~-~~~~g~v~~~~~----~~~~~~~~~l~~~~~~~p~----l~~~~~i~~~------~~~--~~~~~~~ 361 (550)
T 2e4g_A 299 KSGWTWKIPMLG-RFGTGYVYSSRF----ATEDEAVREFCEMWHLDPE----TQPLNRIRFR------VGR--NRRAWVG 361 (550)
T ss_dssp SSEEEEEEECSS-EEEEEEEECTTT----SCHHHHHHHHHHHTTCCTT----TSCCEEEECC------CEE--ESCSEET
T ss_pred CCceEEEccCCC-ccceEEEEecCC----CChHHHHHHHHHhhCcCcc----cCCCceEEec------CCC--ccccccC
Confidence 456766666544 778888764322 24433333333 2222 2233333211 122 3467789
Q ss_pred CEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHh
Q psy2242 86 GGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSS 146 (246)
Q Consensus 86 G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s 146 (246)
++++|||||++++|+.++||++|+.++..+|+++. .++.. ...|+.|++.++..
T Consensus 362 rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~----~~~~~---~~~l~~Y~~~~~~~ 415 (550)
T 2e4g_A 362 NCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFP----DKSLN---PVLTARFNREIETM 415 (550)
T ss_dssp TEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCC----CTTCC---HHHHHHHHHHHHHH
T ss_pred CEEEEehhhcccCccchhhHHHHHHHHHHHHHhcc----ccCCC---HHHHHHHHHHHHHH
Confidence 99999999999999999999999999988887653 23322 24688999988764
No 13
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.55 E-value=1e-07 Score=90.88 Aligned_cols=61 Identities=10% Similarity=0.010 Sum_probs=49.0
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHh
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSS 146 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s 146 (246)
.++.+.++++||||||++++|+.++|+++||.++..+|+++. .++.. ...|+.|++.++..
T Consensus 324 ~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~----~~~~~---~~~l~~Y~~~~~~~ 384 (538)
T 2aqj_A 324 NKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFP----DTSFD---PRLSDAFNAEIVHM 384 (538)
T ss_dssp ESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCC----BTTCC---HHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhh----ccCCC---HHHHHHHHHHHHHH
Confidence 356788999999999999999999999999999888776553 23322 24688999988765
No 14
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.48 E-value=4.6e-07 Score=82.30 Aligned_cols=78 Identities=18% Similarity=0.054 Sum_probs=62.0
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhh
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNC 158 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~ 158 (246)
.++.+.++++||||||..++|+.++|+.+||.+|..+|+++.++ ++. ...|+.|++..+.. ..+-+...+.+
T Consensus 256 ~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~---~~~----~~aL~~Y~~~r~~~-~~~~~~~s~~~ 327 (381)
T 3c4a_A 256 HDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE---DGV----PAALKRFEERALPL-VQLFRGHADNS 327 (381)
T ss_dssp CSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS---SSH----HHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred CCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc---ccH----HHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 35677899999999999999999999999999999999998763 222 25789999988754 44556667777
Q ss_pred hhhhhh
Q psy2242 159 RPSFHS 164 (246)
Q Consensus 159 ~~~~~~ 164 (246)
...|.+
T Consensus 328 ~~~~~~ 333 (381)
T 3c4a_A 328 RVWFET 333 (381)
T ss_dssp HHHHHT
T ss_pred hhhhhc
Confidence 766653
No 15
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.46 E-value=2.8e-08 Score=90.06 Aligned_cols=61 Identities=18% Similarity=0.117 Sum_probs=49.4
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHh
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSS 146 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s 146 (246)
.++.+.++++||||||++++|+.++|+++||.++..+|+++.+. ++. ...|+.|++..+..
T Consensus 275 ~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~---~~~----~~~l~~Y~~~r~~~ 335 (379)
T 3alj_A 275 LDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG---SSV----EDALVAWETRIRPI 335 (379)
T ss_dssp ESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS---SCH----HHHHHHHHHHHHHH
T ss_pred CCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc---cCH----HHHHHHHHHHHHHH
Confidence 34667899999999999999999999999999999999987531 221 14688999887653
No 16
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.37 E-value=2.7e-06 Score=82.33 Aligned_cols=140 Identities=9% Similarity=-0.092 Sum_probs=82.1
Q ss_pred EEEE-eCCCCCeE-EEEEEEccCC---CCCCCCHHHHHHHHhcC-CCccccccCC-eEeeecceeeecCCCccCCccccC
Q psy2242 13 FLYH-LNEPSPLV-AVGFVVGLDY---TNPYLSPFKEFQRFKTH-PAVRPVFEGG-KRIAYGARALNEGGLQAIPRLTFP 85 (246)
Q Consensus 13 wiy~-~~l~~~~v-sVGlv~~l~~---~~~~~~p~~~l~~~k~h-P~i~~~L~gg-~~i~y~a~~ip~gg~~~~pkl~~~ 85 (246)
|++. .+++++.. +|.+...... .....++.++.+.++.. +..-...+-- ....| +... ...++...+
T Consensus 249 ~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~-~~a~~~~~g 322 (570)
T 3fmw_A 249 ILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVTLEDLGAAVARVRGTPLTLTEPVSWLSRF-----GDAS-RQAKRYRSG 322 (570)
T ss_dssp CEEECCCC------CEEEEEESCC-----CCCCHHHHHHHTTSSSSCCCCCCSCCEEEEEE-----CCCC-EECSCSEET
T ss_pred EEEEEeecCCCeEEEEEEEeCCCCccccccCCCHHHHHHHHHHHhhcccccceeeeeeEEe-----eccc-ccccccccC
Confidence 4433 34447877 7777654321 11234566666666542 2111111111 11122 2111 114577789
Q ss_pred CEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhhhhhh
Q psy2242 86 GGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCRPSFH 163 (246)
Q Consensus 86 G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~~~~~ 163 (246)
+++||||||..++|+.++|+++||.++...|+.+.++++ +... ...|..|++..+.. ..+-+...+.+..+|.
T Consensus 323 rv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~-g~~~---~~lL~~Ye~eR~~~-~~~~~~~s~~~~~l~~ 395 (570)
T 3fmw_A 323 RVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVR-GWGS---EELLDTYHDERHPV-AERVLLNTRAQLALMR 395 (570)
T ss_dssp TEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHH-SCCC---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHSC
T ss_pred CEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHc-CCCc---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999885 4332 25789999987643 3333455555555554
No 17
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.37 E-value=1.3e-07 Score=90.04 Aligned_cols=62 Identities=10% Similarity=0.058 Sum_probs=49.2
Q ss_pred CccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhh
Q psy2242 80 PRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSW 147 (246)
Q Consensus 80 pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~ 147 (246)
++...++++||||||++++|+.++|+++||.++..+|+++.+... .. ...|+.|++.++..|
T Consensus 340 ~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~~~---~~---~~~l~~Y~~~~~~~~ 401 (526)
T 2pyx_A 340 AKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNRM---VM---DTISARVNERYQQHW 401 (526)
T ss_dssp SCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSCHH---HH---HHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhcCC---cC---HHHHHHHHHHHHHHH
Confidence 467789999999999999999999999999999998887652111 01 146889999887653
No 18
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.34 E-value=1.1e-06 Score=79.99 Aligned_cols=55 Identities=11% Similarity=0.154 Sum_probs=45.6
Q ss_pred CEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHH
Q psy2242 86 GGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKS 145 (246)
Q Consensus 86 G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~ 145 (246)
+++||||||..++|+.++|+.+||.++..+|+++.++ .++.. ...|+.|++..+.
T Consensus 315 rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~~~~~---~~~L~~Y~~~r~~ 369 (398)
T 2xdo_A 315 PITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADG--KFNSI---EEAVKNYEQQMFI 369 (398)
T ss_dssp CEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSC--CSSSH---HHHHHHHHHHHHH
T ss_pred cEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhc--cCchH---HHHHHHHHHHHHH
Confidence 8999999999999999999999999999999998653 12201 2478899988775
No 19
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.30 E-value=1.4e-06 Score=79.64 Aligned_cols=61 Identities=20% Similarity=0.221 Sum_probs=50.9
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHh
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSS 146 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s 146 (246)
+++.+.++++||||||..++|+.++|+.+||.++..+|+++.+. ++. ...|+.|++..+..
T Consensus 297 ~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~----~~~L~~Ye~~r~~~ 357 (410)
T 3c96_A 297 LPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADV----AAALREYEEARRPT 357 (410)
T ss_dssp CSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSH----HHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCH----HHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999998652 222 25789999988753
No 20
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.26 E-value=1.1e-05 Score=76.53 Aligned_cols=63 Identities=19% Similarity=0.026 Sum_probs=54.0
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHH
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKS 145 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~ 145 (246)
.++...++++|+||||..++|+.++|+++||.++..+|+.+..+++ +... ...|+.|++..+.
T Consensus 295 a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~-g~~~---~~lL~~Ye~eR~p 357 (535)
T 3ihg_A 295 AERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQ-GQAG---AGLLDTYEDERKV 357 (535)
T ss_dssp ESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHT-TSSC---TTHHHHHHHHHHH
T ss_pred ECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhc-CCCc---HHHHHhhHHHHHH
Confidence 3467789999999999999999999999999999999999998885 3322 3579999988765
No 21
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.23 E-value=9.3e-06 Score=77.06 Aligned_cols=124 Identities=8% Similarity=-0.050 Sum_probs=75.7
Q ss_pred eEEEEEeCCCCCeEEEEEEEccCC---CCCCCCHHHHHHHHhcCCCccccccCCeEeeecceeeecCCCccCCccccCCE
Q psy2242 11 GSFLYHLNEPSPLVAVGFVVGLDY---TNPYLSPFKEFQRFKTHPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFPGG 87 (246)
Q Consensus 11 gGwiy~~~l~~~~vsVGlv~~l~~---~~~~~~p~~~l~~~k~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~G~ 87 (246)
..|+++.+ ++..++++...... .....++.++.+.++.. +...+.-.+.... ...+... ...++...+++
T Consensus 207 ~~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~--~~~~~~~-~~a~~~~~grv 279 (500)
T 2qa1_A 207 MVMVGPLP--GGITRIIVCERGTPPQRRETPPSWHEVADAWKRL--TGDDIAHAEPVWV--SAFGNAT-RQVTEYRRGRV 279 (500)
T ss_dssp EEEEEEET--TTEEEEEEEETTCCC-----CCCHHHHHHHHHHH--HSCCCTTSEEEEE--EEEECCE-EECSCSEETTE
T ss_pred EEEEEEcC--CCEEEEEEEcCCCCCccccCCCCHHHHHHHHHHh--cCCCCCccceeEE--EEeccCc-EEccccccCCE
Confidence 34555555 88888887642211 11234566665555431 0011111111110 1111110 11346677899
Q ss_pred EEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHH
Q psy2242 88 CLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKS 145 (246)
Q Consensus 88 llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~ 145 (246)
+|+||||..++|+.++|+++||.++...|..+...++ +... ...|..|++..+.
T Consensus 280 ~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~-g~~~---~~~L~~Y~~eR~~ 333 (500)
T 2qa1_A 280 ILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVN-GTAT---EELLDSYHSERHA 333 (500)
T ss_dssp EECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHT-TSSC---HHHHHHHHHHHHH
T ss_pred EEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHc-CCCC---hHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988884 4322 2578999998654
No 22
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.20 E-value=1.3e-05 Score=76.05 Aligned_cols=63 Identities=8% Similarity=-0.014 Sum_probs=53.1
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHH
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKS 145 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~ 145 (246)
.++...++++|+||||..+.|+.++|+++||.++...|..+...++ +... ...|..|++..+.
T Consensus 272 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~-g~~~---~~~L~~Ye~eR~~ 334 (499)
T 2qa2_A 272 VSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVS-GRAP---AGLLDTYHEERHP 334 (499)
T ss_dssp CSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHT-TSSC---THHHHHHHHHHHH
T ss_pred cccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHc-CCCC---hHHHHHHHHHHHH
Confidence 3466778999999999999999999999999999999999988885 4322 3578999988654
No 23
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.02 E-value=6.4e-05 Score=73.94 Aligned_cols=140 Identities=12% Similarity=0.071 Sum_probs=85.8
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCC------CCCCCCHHHHHHHHhc--CCCccccccCCeEee-ecceeeecCCCccCC
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDY------TNPYLSPFKEFQRFKT--HPAVRPVFEGGKRIA-YGARALNEGGLQAIP 80 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~------~~~~~~p~~~l~~~k~--hP~i~~~L~gg~~i~-y~a~~ip~gg~~~~p 80 (246)
|..++++.+ ++.+++.+...... .....++.++++.++. +|...++ +.+. +....+.. ...+
T Consensus 275 g~~~~~P~~--~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---r~a~ 345 (665)
T 1pn0_A 275 GSIMIIPRE--NNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTFDV----QQLDWFTAYHIGQ---RVTE 345 (665)
T ss_dssp CEEEEEECS--TTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCCEE----EEEEEEEEEEEEE---EECS
T ss_pred ceEEEEEcC--CCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccCce----eeEEEEEeeeccc---eehh
Confidence 444555555 78888877654422 1123466666666542 2321111 1111 11111111 1134
Q ss_pred ccc-cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhh
Q psy2242 81 RLT-FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCR 159 (246)
Q Consensus 81 kl~-~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~ 159 (246)
+.. .++++|+||||-.+.|+.++|+++||..+...|..+...++ +... ...|..|++..+.. ..+-+...+.+.
T Consensus 346 ~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~-g~a~---~~lL~tYe~eR~p~-a~~~i~~s~~~~ 420 (665)
T 1pn0_A 346 KFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT-GRAK---RDILKTYEEERQPF-AQALIDFDHQFS 420 (665)
T ss_dssp CSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT-TCBC---GGGGHHHHHHHHHH-HHHHHHHHHHHH
T ss_pred hcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc-CCCc---HHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 555 69999999999999999999999999999999999988885 4332 35799999987652 223345556666
Q ss_pred hhhh
Q psy2242 160 PSFH 163 (246)
Q Consensus 160 ~~~~ 163 (246)
.+|.
T Consensus 421 ~l~~ 424 (665)
T 1pn0_A 421 RLFS 424 (665)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6664
No 24
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.02 E-value=4.6e-05 Score=74.39 Aligned_cols=75 Identities=11% Similarity=0.015 Sum_probs=56.3
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhhhhhhh
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNCRPSFH 163 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~~~~~~ 163 (246)
.++++|+||||..++|+.++|+++||.++...|..+...++ +... ...|..|++..+.. ..+=+...+.+..+|.
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~-g~a~---~~lL~~Ye~eR~~~-a~~~~~~s~~~~~~~~ 415 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLR-KQCA---PELLHTYSSERQVV-AQQLIDFDREWAKMFS 415 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHT-TSBC---GGGGHHHHHHHHHH-HHHHHHHHHHSCC---
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHc-CCCc---HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999999988885 4322 35799999987652 2222444555555554
No 25
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.98 E-value=7.4e-06 Score=74.57 Aligned_cols=77 Identities=16% Similarity=0.068 Sum_probs=56.5
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHhhchHHHHHHHhh
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKSSWIYKELKEVRNC 158 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~s~~~~el~~~r~~ 158 (246)
.++.+.++++||||||..++|+.++|+.+||.++..+|+++.. ..+. ...|+.|++..+.. ..+-++..+.+
T Consensus 293 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~~~----~~~L~~Ye~~R~~~-~~~~~~~s~~~ 364 (397)
T 2vou_A 293 VDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NHDL----RGSLQSWETRQLQQ-GHAYLNKVKKM 364 (397)
T ss_dssp CSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CSCH----HHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred CCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CCCH----HHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 4577889999999999999999999999999999998888753 1222 24688999876542 33334455555
Q ss_pred hhhhh
Q psy2242 159 RPSFH 163 (246)
Q Consensus 159 ~~~~~ 163 (246)
...+.
T Consensus 365 ~~~~~ 369 (397)
T 2vou_A 365 ASRLQ 369 (397)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 54444
No 26
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.93 E-value=5e-06 Score=74.57 Aligned_cols=64 Identities=11% Similarity=0.123 Sum_probs=52.3
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHH
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKS 145 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~ 145 (246)
+++...++++||||||-.++|+.++|+.+||.++...|+.+.+++...+.- ...|+.|++..+.
T Consensus 305 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~---~~aL~~Ye~~R~~ 368 (412)
T 4hb9_A 305 LLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEEL---VKAISDYEQQMRA 368 (412)
T ss_dssp CCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCH---HHHHHHHHHHHHH
T ss_pred cccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCH---HHHHHHHHHHHHH
Confidence 345677899999999999999999999999999999999998887533311 1468999987654
No 27
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.92 E-value=3.4e-05 Score=71.42 Aligned_cols=58 Identities=10% Similarity=0.041 Sum_probs=47.4
Q ss_pred CccccCCEEE-eccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHH
Q psy2242 80 PRLTFPGGCL-VGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIK 144 (246)
Q Consensus 80 pkl~~~G~ll-VGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~ 144 (246)
++....+++| +||||..++|+.++|+.+||+++..+|+++.+. ++.. ..|..|+..-+
T Consensus 302 ~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~~~~----~~~~~~~~~r~ 360 (430)
T 3ihm_A 302 ATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---SVYD----LRFSEHLERRR 360 (430)
T ss_dssp EECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---SCCS----HHHHHHHHHHH
T ss_pred cccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---CCHH----HHHHHHHHHHH
Confidence 3556677877 999999999999999999999999999998763 5543 57888865443
No 28
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.57 E-value=9.4e-05 Score=70.77 Aligned_cols=63 Identities=14% Similarity=-0.006 Sum_probs=53.9
Q ss_pred CCccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHH
Q psy2242 79 IPRLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDEVSTGLEPKSYEDKIKS 145 (246)
Q Consensus 79 ~pkl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s~~~~~~L~~Y~~~~~~ 145 (246)
.++...++++|+||||..+.|+.++|+++||..+...|..+...++ +... ...|..|++..+.
T Consensus 303 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~-g~a~---~~lL~~Y~~eR~~ 365 (549)
T 2r0c_A 303 ADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLR-GWAG---PGLLATYEEERRP 365 (549)
T ss_dssp CSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHH-TCSC---TTTTHHHHHHHHH
T ss_pred HHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHc-CCCC---HHHHHHHHHHHHH
Confidence 3466789999999999999999999999999999999999998885 4322 3679999998764
No 29
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.54 E-value=4.2e-05 Score=61.78 Aligned_cols=37 Identities=24% Similarity=0.037 Sum_probs=32.9
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
..+|++++|||+ .+.||+.||.||+.||++|.++|+.
T Consensus 293 ~~~~v~l~GDa~------~g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 293 ADLGIYVCGDWC------LSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTTTEEECCGGG------TTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeccc------CCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 468999999984 4789999999999999999999963
No 30
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.00016 Score=64.08 Aligned_cols=43 Identities=21% Similarity=0.149 Sum_probs=36.9
Q ss_pred cccCCEEEeccCccCCCCcccccch--hHHHHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTH--NAMKSGMLAAEATYEALA 124 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~--~Am~SG~lAAeai~~al~ 124 (246)
..-||++++||||++++++...|.. -+|.||+.|||+|.++|+
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 4468999999999999999888833 257899999999999985
No 31
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=94.59 E-value=0.02 Score=42.48 Aligned_cols=29 Identities=31% Similarity=0.532 Sum_probs=26.0
Q ss_pred cceEEecccccccccccccCCCCCceeeC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
..+.||.+.|+.|+.|...||++.|++..
T Consensus 30 ~~~~i~~~~C~~Cg~C~~~CP~~ai~~~~ 58 (106)
T 7fd1_A 30 NFLVIHPDECIDCALCEPECPAQAIFSED 58 (106)
T ss_dssp SCEEECTTTCCCCCTTGGGCTTCCEEEGG
T ss_pred CcEEECcccCCChhhhHHhCCChhhhccc
Confidence 35789999999999999999999998864
No 32
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=93.67 E-value=0.038 Score=47.90 Aligned_cols=38 Identities=24% Similarity=-0.002 Sum_probs=31.8
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCC
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAG 127 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd 127 (246)
.++++|+||++. +.||+.|+.||..+|+.|.+.+.+.|
T Consensus 294 ~~rl~laGDa~~------g~gv~~a~~sg~~lA~~l~~~~~~~~ 331 (336)
T 1yvv_A 294 DLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp TTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCEEEEecCCC------CCCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 489999999995 34999999999999999999885443
No 33
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=93.45 E-value=0.014 Score=40.50 Aligned_cols=32 Identities=25% Similarity=0.527 Sum_probs=28.5
Q ss_pred EecccccccccccccCCCCCceeeCCCCCCCC
Q psy2242 210 INAQNCIHCKTCDIKDPTQNINWVVPEGGGGP 241 (246)
Q Consensus 210 i~~~nc~~c~~c~i~~p~~~i~w~~p~gg~g~ 241 (246)
++.+.|+.|+.|...||++.|+|+...|+.-+
T Consensus 42 ~~~~~C~~Cg~C~~~CP~~ai~~~~~~~~~~~ 73 (80)
T 1jb0_C 42 PRTEDCVGCKRCETACPTDFLSIRVYLGAETT 73 (80)
T ss_dssp TTGGGCCCCCHHHHHCCSSSCSEEEECCSCCT
T ss_pred CCCCcCcCcCChhhhCCCCccEeeeecchHHH
Confidence 57789999999999999999999999887643
No 34
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=93.30 E-value=0.014 Score=42.78 Aligned_cols=28 Identities=32% Similarity=0.559 Sum_probs=21.0
Q ss_pred eEEecccccccccccccCCCCCceeeCC
Q psy2242 208 LQINAQNCIHCKTCDIKDPTQNINWVVP 235 (246)
Q Consensus 208 ~~i~~~nc~~c~~c~i~~p~~~i~w~~p 235 (246)
..++.+.|+.|+.|...||++.|+|+.|
T Consensus 76 ~~~~~~~C~~Cg~C~~~CP~~Ai~~~~~ 103 (103)
T 1xer_A 76 DPVNEQACIFCMACVNVCPVAAIDVKPP 103 (103)
T ss_dssp ECTTGGGCCCCCHHHHHCTTCCEEECCC
T ss_pred eecCcccccChhhHHHhccccceEecCC
Confidence 4567777888888888888888877654
No 35
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=93.24 E-value=0.051 Score=35.12 Aligned_cols=26 Identities=8% Similarity=0.019 Sum_probs=16.9
Q ss_pred ceEE--ecccccccccccccCCCCCcee
Q psy2242 207 RLQI--NAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 207 ~~~i--~~~nc~~c~~c~i~~p~~~i~w 232 (246)
+..+ +.+.|..|+.|...||++.|+|
T Consensus 31 ~~~~~~~~~~c~~C~~C~~~CP~~Ai~~ 58 (59)
T 1dwl_A 31 KAMVTAPDSTAECAQDAIDACPVEAISK 58 (59)
T ss_dssp CEEESCTTCCCGGGGTGGGGSTTCCEEE
T ss_pred cEEEecChhhhhHHHHHHHhCCHhhEEc
Confidence 5443 6666777777777777666665
No 36
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=93.12 E-value=0.057 Score=39.80 Aligned_cols=28 Identities=25% Similarity=0.614 Sum_probs=25.4
Q ss_pred ceEEecccccccccccccCCCCCceeeC
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
...|+...|+.|+.|...||++.|++..
T Consensus 31 ~~~~~~~~C~~Cg~C~~~CP~~Ai~~~~ 58 (105)
T 2v2k_A 31 MLYIHPDECVDCGACEPVCPVEAIYYED 58 (105)
T ss_dssp CEEECTTTCCCCCCSGGGCTTCCEEEGG
T ss_pred cEEEeCCcCcchhhHHHhCCccCEEecC
Confidence 5789999999999999999999998863
No 37
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=93.04 E-value=0.074 Score=34.29 Aligned_cols=26 Identities=23% Similarity=0.615 Sum_probs=22.4
Q ss_pred ceEEecccccccccccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
++.||.+.|++|+.|.-.|| ..|.+.
T Consensus 1 ~i~i~~~~C~~C~~C~~~Cp-~~~~~~ 26 (59)
T 1dwl_A 1 TIVIDHEECIGCESCVELCP-EVFAMI 26 (59)
T ss_dssp CEEESSCCCSSCCGGGGTST-TTEEEE
T ss_pred CeEEChhhCcChhHHHHHCC-HHheec
Confidence 46789999999999999999 477773
No 38
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=92.47 E-value=0.047 Score=39.88 Aligned_cols=30 Identities=17% Similarity=0.340 Sum_probs=26.9
Q ss_pred cceEEecccccccccccccCCCCCceeeCC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWVVP 235 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~~p 235 (246)
.++.|+.+.|+.|+.|.-.||.+.|.+...
T Consensus 36 ~~~~id~~~C~~Cg~C~~~CP~~ai~~~~~ 65 (103)
T 1xer_A 36 TIVGVDFDLCIADGSCINACPVNVFQWYDT 65 (103)
T ss_dssp SSEEEETTTCCCCCHHHHHCTTCCCEEEEC
T ss_pred ceEEEehhhCCChhhHHHHcCccCeecccc
Confidence 578999999999999999999999988653
No 39
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=92.27 E-value=0.056 Score=37.66 Aligned_cols=28 Identities=25% Similarity=0.489 Sum_probs=24.9
Q ss_pred ceEEecccccccccccccCCCCCceeeC
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
++.++...|+.|+.|...||++.|+++.
T Consensus 31 ~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 58 (78)
T 1h98_A 31 QFYIHPEECIDCGACVPACPVNAIYPEE 58 (78)
T ss_dssp SEEECTTTCCCCCTHHHHCTTCCEEEGG
T ss_pred EEEECcccCCcHhHHHHhCCccceEecc
Confidence 5789999999999999999999998653
No 40
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=92.17 E-value=0.048 Score=35.22 Aligned_cols=26 Identities=31% Similarity=0.547 Sum_probs=23.1
Q ss_pred ceEEecccccccccccccCCCCCcee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w 232 (246)
+..++.+.|+.|+.|...||++.|+.
T Consensus 29 ~~~~~~~~C~~C~~C~~~CP~~ai~~ 54 (55)
T 2fdn_A 29 RYVIDADTCIDCGACAGVCPVDAPVQ 54 (55)
T ss_dssp SCEECTTTCCCCCHHHHTCTTCCEEE
T ss_pred EEEeccccCcChhChHHHccccceec
Confidence 46789999999999999999998875
No 41
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.52 E-value=0.19 Score=42.26 Aligned_cols=39 Identities=21% Similarity=0.091 Sum_probs=33.6
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
..+++.++||+++. .+-++.|+..|+.||..|.+.|...
T Consensus 256 ~~~~vya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 256 TARGIFACGDVARP-----AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp SSTTEEECSGGGCT-----TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeecCCc-----hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 45899999999996 3568999999999999999998643
No 42
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=91.36 E-value=0.052 Score=36.06 Aligned_cols=26 Identities=19% Similarity=0.583 Sum_probs=22.6
Q ss_pred ceEEecccccccccccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
++.||.+.|+.|+.|.-.|| +.|.+.
T Consensus 3 ~~~id~~~C~~Cg~C~~~CP-~~~~~~ 28 (64)
T 1dax_A 3 KFYVDQDECIACESCVEIAP-GAFAMD 28 (64)
T ss_dssp CCEECSTTCCSCCHHHHHCT-TTEEEC
T ss_pred EEEEccccCCCchHHHHhCC-ccEeEc
Confidence 57889999999999999999 777764
No 43
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=90.94 E-value=0.13 Score=36.22 Aligned_cols=24 Identities=25% Similarity=0.664 Sum_probs=16.4
Q ss_pred EEecccccccccccccCCCCCcee
Q psy2242 209 QINAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 209 ~i~~~nc~~c~~c~i~~p~~~i~w 232 (246)
.++.+.|++|+.|.-.||++.|.+
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~ 25 (82)
T 3eun_A 2 LMITDECINCDVCEPECPNGAISQ 25 (82)
T ss_dssp EEECTTCCCCCTTGGGCTTCCEEE
T ss_pred eEeCCCCcCccchHHHCChhheEc
Confidence 355667777777777777776665
No 44
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=90.76 E-value=0.052 Score=37.68 Aligned_cols=27 Identities=26% Similarity=0.591 Sum_probs=24.7
Q ss_pred ceEEecccccccccccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
+..|+...|++|+.|...||++.|++.
T Consensus 31 ~~~~~~~~C~~Cg~C~~~CP~~ai~~~ 57 (77)
T 1bc6_A 31 QYYIDPDVCIDCGACEAVCPVSAIYHE 57 (77)
T ss_dssp SEEECTTTCCSCCSHHHHSGGGSSEET
T ss_pred cEEECcccCcCccCCHhhcCccceEec
Confidence 578999999999999999999999875
No 45
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=90.59 E-value=0.11 Score=33.48 Aligned_cols=25 Identities=24% Similarity=0.684 Sum_probs=21.1
Q ss_pred ceEEecccccccccccccCCCCCcee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w 232 (246)
++.||.+.|+.|+.|.-.||. .|.+
T Consensus 2 ~~~i~~~~C~~C~~C~~~Cp~-~~~~ 26 (60)
T 1rof_A 2 KVRVDADACIGCGVCENLCPD-VFQL 26 (60)
T ss_dssp CSEECTTTCCSCCSSTTTCTT-TBCC
T ss_pred EEEEchhhCCCChHHHHhCcH-HHeE
Confidence 467899999999999999996 6654
No 46
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=90.23 E-value=0.12 Score=35.69 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=24.4
Q ss_pred ceEEecccccccccccccCCCCCceeeC
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
+..++.+.|++|+.|.-.||.+.|....
T Consensus 2 ~~~~~~~~C~~Cg~C~~~CP~~a~~~~~ 29 (80)
T 1jb0_C 2 HTVKIYDTCIGCTQCVRACPTDVLEMVP 29 (80)
T ss_dssp CEEEEETTCCCCCHHHHHCTTCCCEEEE
T ss_pred CCcccCCcCcChhHHHHHCCcccccccc
Confidence 4677889999999999999999988764
No 47
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=90.10 E-value=0.05 Score=35.30 Aligned_cols=23 Identities=22% Similarity=0.694 Sum_probs=18.8
Q ss_pred eEEecccccccccccccCCCCCcee
Q psy2242 208 LQINAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 208 ~~i~~~nc~~c~~c~i~~p~~~i~w 232 (246)
+.|| +.|++|+.|.-.||+ .|.+
T Consensus 2 v~id-~~C~~C~~C~~~CP~-~~~~ 24 (58)
T 1f2g_A 2 IEVN-DDCMACEACVEICPD-VFEM 24 (58)
T ss_dssp CBCT-TTCCCCCHHHHHCTT-TEEE
T ss_pred cEEC-CcCccchHHHHhCCc-cEEE
Confidence 5678 889999999999997 6664
No 48
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=89.86 E-value=0.4 Score=41.17 Aligned_cols=40 Identities=20% Similarity=0.181 Sum_probs=31.7
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
..-||+.++||.++. |+ +=++.|+..|++||+.|.+.|+.
T Consensus 268 Ts~pgIyA~GDv~~~--~~--~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 268 TSVPGIFAAGDVRDK--GL--RQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp CSSTTEEECSTTBSC--SC--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeecCCC--cc--hHHHHHHHHHHHHHHHHHHHHHh
Confidence 456899999999863 11 23688999999999999988853
No 49
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=89.83 E-value=0.17 Score=35.82 Aligned_cols=25 Identities=24% Similarity=0.655 Sum_probs=20.3
Q ss_pred EEecccccccccccccCCCCCceee
Q psy2242 209 QINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 209 ~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
.++.+.|++|+.|.-.||++.|.+.
T Consensus 2 ~~~~~~C~~C~~C~~~CP~~ai~~~ 26 (85)
T 2zvs_A 2 LLITKKCINCDMCEPECPNEAISMG 26 (85)
T ss_dssp EEECTTCCCCCTTTTTCTTCCEECC
T ss_pred EEeCCcCcChhHHHHHCchhccCcC
Confidence 3567889999999999998888764
No 50
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=89.81 E-value=0.12 Score=36.26 Aligned_cols=29 Identities=24% Similarity=0.319 Sum_probs=26.0
Q ss_pred cceEEecccccccc------cccccCCCCCceeeC
Q psy2242 206 ERLQINAQNCIHCK------TCDIKDPTQNINWVV 234 (246)
Q Consensus 206 ~~~~i~~~nc~~c~------~c~i~~p~~~i~w~~ 234 (246)
....|+.+.|+.|+ .|.-.||++.|++..
T Consensus 28 ~~~~i~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~ 62 (82)
T 3eun_A 28 ETYVIEPSLCTECVGHYETSQCVEVCPVDAIIKDP 62 (82)
T ss_dssp SSEEECGGGCCTTTTTCSSCHHHHHCTTCCEEECG
T ss_pred CceEEchhhcCCCCCCCCccHHHHhCCccceEEcC
Confidence 36789999999999 999999999999863
No 51
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=89.70 E-value=0.096 Score=36.69 Aligned_cols=26 Identities=19% Similarity=0.594 Sum_probs=22.9
Q ss_pred ceEEecccccccccccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
++.||.++|+.|+.|.-.|| +.|.+.
T Consensus 3 ~v~vd~~~CigCg~C~~~CP-~~~~~~ 28 (81)
T 1iqz_A 3 YTIVDKETCIACGACGAAAP-DIYDYD 28 (81)
T ss_dssp EEEECTTTCCCCSHHHHHCT-TTEEEC
T ss_pred EEEEecccCcccChhhHhCc-hheeeC
Confidence 67899999999999999999 677764
No 52
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=89.62 E-value=0.1 Score=34.48 Aligned_cols=27 Identities=15% Similarity=0.310 Sum_probs=23.1
Q ss_pred cceEEecccccccccccccCCCCCceee
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
.++.||.+.|+.|+.|...||. .|.+.
T Consensus 2 ~~~~id~~~C~~C~~C~~~Cp~-~~~~~ 28 (66)
T 1sj1_A 2 WKVSVDQDTCIGDAICASLCPD-VFEMN 28 (66)
T ss_dssp EEEEECTTTCCCCCHHHHHCTT-TEEEC
T ss_pred cEEEECcccCcCchHHHHhCCc-eEEEC
Confidence 3678999999999999999995 77764
No 53
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=89.30 E-value=0.34 Score=41.50 Aligned_cols=39 Identities=23% Similarity=0.209 Sum_probs=32.5
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
...+++.++||+++. ..+.+..|+.+|..||..|.+.|+
T Consensus 297 t~~~~vya~GD~~~~----~~~~~~~A~~~g~~aa~~i~~~l~ 335 (338)
T 3itj_A 297 TSVPGFFAAGDVQDS----KYRQAITSAGSGCMAALDAEKYLT 335 (338)
T ss_dssp CSSTTEEECGGGGCS----SCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeeccCCC----CccceeeehhhhHHHHHHHHHHHh
Confidence 345899999999983 135678999999999999999885
No 54
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=89.27 E-value=0.13 Score=35.82 Aligned_cols=24 Identities=21% Similarity=0.440 Sum_probs=18.2
Q ss_pred EecccccccccccccCCCCCceee
Q psy2242 210 INAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 210 i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
++.+.|++|+.|.-.||++.|.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (80)
T 1rgv_A 3 YINDDCTACDACVEECPNEAITPG 26 (80)
T ss_dssp CCCSCCCCCCTTTTTCTTCCEECC
T ss_pred EeCCCCcChhhHHHHcChhccCcC
Confidence 456778888888888888877753
No 55
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=89.24 E-value=0.093 Score=47.90 Aligned_cols=27 Identities=15% Similarity=0.476 Sum_probs=24.3
Q ss_pred cceEEecccccccccccccCCCCCcee
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w 232 (246)
.++.||.++|+.|+.|.-.||+..|..
T Consensus 232 ~~~~id~~~C~~Cg~C~~~CP~~Ai~~ 258 (366)
T 3mm5_B 232 KTIKVDVEKCMYCGNCYTMCPGMPLFD 258 (366)
T ss_dssp TEEEECGGGCCCCCHHHHHCTTCCCCC
T ss_pred CeEEEehhhCCCcchHHHhCCHhhccc
Confidence 589999999999999999999987743
No 56
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=89.18 E-value=0.5 Score=40.09 Aligned_cols=42 Identities=21% Similarity=0.301 Sum_probs=35.1
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
...+++.++||+++.- ...+-++.|+..|+.||+.|.+.|+.
T Consensus 277 t~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (323)
T 3f8d_A 277 TSVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTE 318 (323)
T ss_dssp CSSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHH
Confidence 3468999999999863 34567899999999999999998864
No 57
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=89.08 E-value=0.22 Score=31.90 Aligned_cols=25 Identities=28% Similarity=0.611 Sum_probs=21.5
Q ss_pred eEEecccccccccccccCCCCCceee
Q psy2242 208 LQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 208 ~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
++| .+.|++|+.|.-.||.+.|.+.
T Consensus 2 ~~i-~~~C~~C~~C~~~CP~~ai~~~ 26 (55)
T 2fdn_A 2 YVI-NEACISCGACEPECPVNAISSG 26 (55)
T ss_dssp EEE-CTTCCCCCTTGGGCTTCCEECC
T ss_pred eEe-cccCcChhhHHHHCCccccCcC
Confidence 356 7899999999999999998764
No 58
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=88.93 E-value=0.51 Score=40.17 Aligned_cols=40 Identities=23% Similarity=0.129 Sum_probs=31.7
Q ss_pred ccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 81 kl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
+..-||+.++||.++. |. +=+..|+.+|..||..|.+.|+
T Consensus 273 ~Ts~pgIyA~GDv~~~--~~--~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 273 KTSVDGVFACGDVCDR--VY--RQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp BCSSTTEEECSTTTCS--SC--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEEeccCC--cc--hHHHHHHHHHHHHHHHHHHHHh
Confidence 4556899999999874 22 1157899999999999999886
No 59
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=88.77 E-value=0.16 Score=35.48 Aligned_cols=24 Identities=25% Similarity=0.595 Sum_probs=18.5
Q ss_pred EecccccccccccccCCCCCceee
Q psy2242 210 INAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 210 i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
|+.+.|++|+.|.-.||++.|.+.
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~~~ 26 (82)
T 2fgo_A 3 KITDDCINCDVCEPECPNGAISQG 26 (82)
T ss_dssp CCCTTCCCCCTTGGGCTTCCEEEC
T ss_pred eeCCCCCChhhHHHHCChhccCCC
Confidence 456778888888888888877763
No 60
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=88.67 E-value=0.13 Score=41.27 Aligned_cols=28 Identities=32% Similarity=0.517 Sum_probs=25.0
Q ss_pred ceEEecccccccccccccCCCCCceeeC
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
...++...|+.|+.|...||++.|.+..
T Consensus 90 ~~~~~~~~C~~C~~C~~~CP~~Ai~~~~ 117 (182)
T 3i9v_9 90 VYEINMLRCIFCGLCEEACPTGAIVLGY 117 (182)
T ss_dssp EEEEETTTCCCCCHHHHHCSSSCEEECS
T ss_pred eeecCCCcCcChhChhhhCCccceEecC
Confidence 4578999999999999999999998863
No 61
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=88.67 E-value=0.61 Score=40.99 Aligned_cols=96 Identities=18% Similarity=0.090 Sum_probs=54.6
Q ss_pred CeEEEEEeCCCCCeEEEEEEEccCCCCCCCCH---HHHHHHHh-cCCCccccccCCeEeeecceeeecCCCccCCccccC
Q psy2242 10 GGSFLYHLNEPSPLVAVGFVVGLDYTNPYLSP---FKEFQRFK-THPAVRPVFEGGKRIAYGARALNEGGLQAIPRLTFP 85 (246)
Q Consensus 10 GgGwiy~~~l~~~~vsVGlv~~l~~~~~~~~p---~~~l~~~k-~hP~i~~~L~gg~~i~y~a~~ip~gg~~~~pkl~~~ 85 (246)
.+.|+.+.. ++.+.||.....+..+...++ ..+++.++ ..|.++ +.+.+..-+ |+. ....|
T Consensus 256 ~~~~~~p~~--~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~----~~~~~~~w~------g~~---~~t~d 320 (382)
T 1ryi_A 256 DHCYIVPRK--SGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLPAIQ----NMKVDRFWA------GLR---PGTKD 320 (382)
T ss_dssp TTEEEEECT--TSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCGGGG----GSEEEEEEE------EEE---EECSS
T ss_pred CCEEEEEcC--CCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCCCcC----CCceeeEEE------Eec---ccCCC
Confidence 357787776 788888875333211122222 23344443 345443 223322111 111 12346
Q ss_pred CEEEeccCc---cC--CCCcccccchhHHHHHHHHHHHHH
Q psy2242 86 GGCLVGCTA---GF--LNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 86 G~llVGDAA---G~--vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
+..++|++. ++ ..++.+.|+.+|..+|+++|+.|.
T Consensus 321 ~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 321 GKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM 360 (382)
T ss_dssp SCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHT
T ss_pred CCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHh
Confidence 677788764 33 367889999999999999998874
No 62
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=88.43 E-value=0.16 Score=40.35 Aligned_cols=28 Identities=18% Similarity=0.300 Sum_probs=24.6
Q ss_pred ceEEecccccccccccccCCCCCceeeC
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
.+.|+...|+.|+.|...||++.|+..-
T Consensus 39 ~~~id~~~C~~Cg~Cv~~CP~~AI~~~~ 66 (150)
T 1jnr_B 39 AYNREPDMCWECYSCVKMCPQGAIDVRG 66 (150)
T ss_dssp EEESCGGGCCCCCHHHHHCTTCCEEECC
T ss_pred eeeeCcccCcCHhHHHHhCCccceEecC
Confidence 3678999999999999999999988763
No 63
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=88.09 E-value=0.17 Score=40.96 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=25.2
Q ss_pred cceEEecccccccccccccCCCCCceeeC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
..+.++...|+.|+.|...||++.|++..
T Consensus 37 ~~~~~d~~~C~~Cg~Cv~~CP~~Ai~~~~ 65 (166)
T 3gyx_B 37 KAFNQEPEACWECYSCIKICPQGAITARP 65 (166)
T ss_dssp EEEESCGGGCCCCCHHHHHCSSCCEEECC
T ss_pred eeEecCcccCcccChHhHhCCccceEEec
Confidence 35678999999999999999999998764
No 64
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=87.98 E-value=0.31 Score=42.68 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=27.5
Q ss_pred cceEEecccccccccccccCCCCCceeeCCC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWVVPE 236 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~~p~ 236 (246)
..+.||.+.|+.|+.|...||++.|.+....
T Consensus 90 g~v~id~~~CigC~~C~~~CP~~Ai~~~~~~ 120 (274)
T 1ti6_B 90 GIVLIDPEKAKGKKELLDTCPYGVMYWNEEE 120 (274)
T ss_dssp SCEEECTTTTTTCGGGGGGCSSCCCEEETTT
T ss_pred CcEEechhhccchHHHHhhCccCCeEEEccc
Confidence 3688999999999999999999999998543
No 65
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=87.65 E-value=0.28 Score=42.18 Aligned_cols=42 Identities=24% Similarity=0.115 Sum_probs=32.7
Q ss_pred ccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 81 RLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 81 kl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
+..-||+.++||.++. |+ +=+..|+.+|+.||.+|.+.|.+.
T Consensus 261 ~Ts~p~IyA~GDv~~~--~~--~~~~~A~~~G~~AA~~i~~~L~~e 302 (304)
T 4fk1_A 261 RTSEKNIYLAGETTTQ--GP--SSLIIAASQGNKAAIAINSDITDE 302 (304)
T ss_dssp BCSSTTEEECSHHHHT--SC--CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEeccCCC--cc--hHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3456899999999863 22 226789999999999999998653
No 66
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=86.61 E-value=0.16 Score=46.73 Aligned_cols=26 Identities=23% Similarity=0.602 Sum_probs=23.5
Q ss_pred cceEEecccccccccccccCCCCCce
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNIN 231 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~ 231 (246)
+.+.||.++|+.|+.|.-.||+..|+
T Consensus 249 ~~v~id~~~Ci~Cg~C~~~CP~~Ai~ 274 (386)
T 3or1_B 249 KSVAINNDRCMYCGNCYTMCPALPLS 274 (386)
T ss_dssp EEEEECTTTCCCCCHHHHHCTTCCCC
T ss_pred cccccCCCcCCccccHHHhCcHhhCc
Confidence 46899999999999999999998774
No 67
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=85.79 E-value=0.92 Score=38.33 Aligned_cols=39 Identities=18% Similarity=0.050 Sum_probs=32.5
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
..+++.++||+++.- .+-+..|+..|+.||..|.+.|+.
T Consensus 275 ~~~~v~a~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 275 SVAGLFAAGDLRKDA----PKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp SSTTEEECGGGBTTC----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCc----hhhhhhHHhhHHHHHHHHHHHHHh
Confidence 458999999999641 356889999999999999998863
No 68
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=85.73 E-value=0.28 Score=40.68 Aligned_cols=30 Identities=17% Similarity=0.361 Sum_probs=25.6
Q ss_pred cceEEecccccccccccccCCCCCceeeCC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWVVP 235 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~~p 235 (246)
..+.||.+.|+.|+.|...||++.|.+...
T Consensus 81 g~~~id~~~CigC~~C~~~CP~~Ai~~~~~ 110 (195)
T 2vpz_B 81 GLVLVDPKKCIACGACIAACPYDARYLHPA 110 (195)
T ss_dssp SCEEECTTTCCCCCHHHHHCTTCCCEECTT
T ss_pred cceeecCCCCCCcChhHhhCCCCCeEECCC
Confidence 367889999999999999999999988653
No 69
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=85.65 E-value=0.43 Score=43.86 Aligned_cols=39 Identities=21% Similarity=0.164 Sum_probs=27.9
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCC
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAG 127 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd 127 (246)
-+|+.++||.. .| +.||.-|+.||+.||++|++-|..|.
T Consensus 457 i~gLyl~G~~t---~p--G~Gv~ga~~SG~~aA~~il~dL~gG~ 495 (501)
T 4dgk_A 457 ITNLYLVGAGT---HP--GAGIPGVIGSAKATAGLMLEDLIGGS 495 (501)
T ss_dssp CTTEEECCCH-----------HHHHHHHHHHHHHHHHHHHC---
T ss_pred CCCEEEECCCC---CC--cccHHHHHHHHHHHHHHHHHHhcCCC
Confidence 48999999864 33 57999999999999999999987654
No 70
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=85.55 E-value=0.3 Score=34.04 Aligned_cols=28 Identities=21% Similarity=0.362 Sum_probs=25.3
Q ss_pred ceEEecccccccc------cccccCCCCCceeeC
Q psy2242 207 RLQINAQNCIHCK------TCDIKDPTQNINWVV 234 (246)
Q Consensus 207 ~~~i~~~nc~~c~------~c~i~~p~~~i~w~~ 234 (246)
...|+.+.|+.|+ .|.-.||++.|++..
T Consensus 29 ~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~~ 62 (82)
T 2fgo_A 29 IYVIDPNLCTECVGHYDEPQCQQVCPVDCIPLDD 62 (82)
T ss_dssp SEEECTTTCCTTTTTCSSCHHHHHCTTCCCCBCT
T ss_pred eEEEEchhCccCCCcCCCCHhHhhCCcccEEccC
Confidence 5789999999999 999999999999863
No 71
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=85.29 E-value=0.77 Score=39.15 Aligned_cols=40 Identities=18% Similarity=0.215 Sum_probs=33.1
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
...+++.++||+++.- .+-+..|+.+|+.||..|.+.|+.
T Consensus 276 t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 276 TSIPGVFAAGDVMDHI----YRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp CSSTTEEECGGGGCSS----SCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEcccccCCc----chhhhhhhccHHHHHHHHHHHHHh
Confidence 3468999999999853 245789999999999999998853
No 72
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=84.98 E-value=0.26 Score=31.75 Aligned_cols=28 Identities=7% Similarity=-0.019 Sum_probs=23.8
Q ss_pred cceEEe--cccccccccccccCCCCCceee
Q psy2242 206 ERLQIN--AQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 206 ~~~~i~--~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
....++ ...|+.|+.|.-.||++.|+++
T Consensus 29 ~~~~~~~~~~~C~~C~~C~~~CP~~Ai~~~ 58 (58)
T 1f2g_A 29 DKAVVINPDSDLDCVEEAIDSCPAEAIVRS 58 (58)
T ss_dssp SSEEESCTTCCSTHHHHHHHTCSSCCCBCC
T ss_pred cEEEeCCCccchHHHHHHHhhCChhhEEeC
Confidence 346777 8899999999999999998763
No 73
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=84.58 E-value=0.52 Score=32.37 Aligned_cols=25 Identities=20% Similarity=0.232 Sum_probs=22.1
Q ss_pred EEecccccc--cccccccCCCCCceee
Q psy2242 209 QINAQNCIH--CKTCDIKDPTQNINWV 233 (246)
Q Consensus 209 ~i~~~nc~~--c~~c~i~~p~~~i~w~ 233 (246)
.|+.++|++ |+.|.-.||.+.|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~Cp~~ai~~~ 28 (77)
T 1bc6_A 2 YVITEPCIGTKDASCVEVCPVDCIHEG 28 (77)
T ss_dssp EECCSTTTTCCCCSSTTTCTTCCEEEC
T ss_pred EEeCccCCCCCcchhHHhcccccEEeC
Confidence 467889999 9999999999999874
No 74
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=84.57 E-value=1.3 Score=34.63 Aligned_cols=40 Identities=15% Similarity=0.121 Sum_probs=33.1
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
...+++.++||.++...| =++.|+..|+.||..|...++.
T Consensus 133 t~~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 133 TSYPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp CSSTTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHHhhh
Confidence 356899999999997543 4588999999999999887763
No 75
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=84.39 E-value=0.93 Score=38.85 Aligned_cols=38 Identities=21% Similarity=0.183 Sum_probs=31.7
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
..+++.++||+++. | .+-++.|+..|+.||..|.+.|.
T Consensus 279 ~~~~vya~GD~~~~--~--~~~~~~A~~~g~~aa~~i~~~l~ 316 (319)
T 3cty_A 279 SVPGVYAAGDVTSG--N--FAQIASAVGDGCKAALSLYSDSI 316 (319)
T ss_dssp SSTTEEECSTTBTT--C--CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeecccCc--c--hhhHHHHHHHHHHHHHHHHHHhh
Confidence 45799999999985 2 24588999999999999998874
No 76
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=83.98 E-value=1.6 Score=37.09 Aligned_cols=40 Identities=18% Similarity=0.116 Sum_probs=32.6
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
..+++.++||+++.-. +-++.|+..|+.||..|.+.|...
T Consensus 268 ~~~~vya~GD~~~~~~----~~~~~A~~~g~~aa~~i~~~l~~~ 307 (310)
T 1fl2_A 268 NVKGVFAAGDCTTVPY----KQIIIATGEGAKASLSAFDYLIRT 307 (310)
T ss_dssp SSTTEEECSTTBSCSS----CCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEeecccCCcc----hhhhhhHhhHHHHHHHHHHHHHHh
Confidence 3579999999998531 346889999999999999988643
No 77
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=83.85 E-value=0.26 Score=46.23 Aligned_cols=23 Identities=30% Similarity=0.651 Sum_probs=21.6
Q ss_pred cceEEecccccccccccccCCCC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQ 228 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~ 228 (246)
+++.||.++|++|+.|.-.||+.
T Consensus 294 ~~l~Id~~~C~~Cg~Ci~~CP~a 316 (437)
T 3or1_A 294 GTLSIDNKNCTRCMHCINTMPRA 316 (437)
T ss_dssp TEEEECGGGCCCCSHHHHHCTTT
T ss_pred CEEEEccccCCchhhhHhhCcHh
Confidence 58999999999999999999984
No 78
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=83.85 E-value=0.31 Score=35.84 Aligned_cols=25 Identities=28% Similarity=0.456 Sum_probs=22.2
Q ss_pred EEecccccccc--cccccCCCCCceee
Q psy2242 209 QINAQNCIHCK--TCDIKDPTQNINWV 233 (246)
Q Consensus 209 ~i~~~nc~~c~--~c~i~~p~~~i~w~ 233 (246)
.|+.+.|++|+ .|.-.||.+.|.+.
T Consensus 2 ~~~~~~C~~C~~~~C~~~CP~~ai~~~ 28 (106)
T 7fd1_A 2 FVVTDNCIKCKYTDCVEVCPVDCFYEG 28 (106)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred eECccccCCccCcHHHHHcCccceEcC
Confidence 46789999999 99999999998874
No 79
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=82.83 E-value=0.3 Score=45.52 Aligned_cols=24 Identities=29% Similarity=0.674 Sum_probs=22.0
Q ss_pred cceEEecccccccccccccCCCCC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQN 229 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~ 229 (246)
.++.||.++|++|+.|.-.||+..
T Consensus 277 ~~~~id~~~Ci~Cg~Ci~~CP~~~ 300 (418)
T 3mm5_A 277 KELTIDNRECVRCMHCINKMPKAL 300 (418)
T ss_dssp SCEEECTTTCCCCCHHHHHCTTTE
T ss_pred ceeEEChhhcCccChhHHhCcHhh
Confidence 589999999999999999999863
No 80
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=82.74 E-value=1.1 Score=38.16 Aligned_cols=42 Identities=10% Similarity=0.039 Sum_probs=33.7
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
..+|+.++||++.+- -..+-++.|+..|+.||+.|.+.|+..
T Consensus 276 ~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~~ 317 (332)
T 3lzw_A 276 NIEGFFAAGDICTYE--GKVNLIASGFGEAPTAVNNAKAYMDPK 317 (332)
T ss_dssp SSTTEEECGGGEECT--TCCCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ecCCEEEccceecCC--CCcceEeeehhhHHHHHHHHHHhhChh
Confidence 458999999999642 234567899999999999999988643
No 81
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=82.41 E-value=1.6 Score=37.50 Aligned_cols=40 Identities=23% Similarity=0.193 Sum_probs=33.2
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
...+++.++||+++.- ..-...|+..|+.||..|.+.|..
T Consensus 285 t~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~ 324 (333)
T 1vdc_A 285 TSVPGVFAAGDVQDKK----YRQAITAAGTGCMAALDAEHYLQE 324 (333)
T ss_dssp CSSTTEEECGGGGCSS----CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeeccCCC----chhHHHHHHhHHHHHHHHHHHHHh
Confidence 3468999999999853 345788999999999999998864
No 82
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=81.98 E-value=0.41 Score=33.14 Aligned_cols=27 Identities=22% Similarity=0.438 Sum_probs=24.6
Q ss_pred ceEEecccccccc------cccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCK------TCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~------~c~i~~p~~~i~w~ 233 (246)
...++...|+.|+ .|.-.||++.|++.
T Consensus 29 ~~~~~~~~C~~C~~~~~~~~C~~~CP~~Ai~~~ 61 (80)
T 1rgv_A 29 IYVIDPTKCSECVGAFDEPQCRLVCPADCIPDN 61 (80)
T ss_dssp SCEECTTTCCTTTTTCSSCHHHHHCSSCCCCBC
T ss_pred eeEEcchhCcCCCCcCCccHHHHhcCcccEEec
Confidence 5788999999999 99999999999875
No 83
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=81.52 E-value=0.37 Score=38.52 Aligned_cols=24 Identities=25% Similarity=0.492 Sum_probs=20.8
Q ss_pred ecccccccccccccCCCCCceeeC
Q psy2242 211 NAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
+.+.|++|+.|.-.||++.|.+..
T Consensus 49 d~~~Ci~C~~C~~~CP~~ai~~~~ 72 (182)
T 3i9v_9 49 GLEKCIGCSLCAAACPAYAIYVEP 72 (182)
T ss_dssp SCBSCCCCCHHHHHCTTCCEEEEE
T ss_pred CCccCcccccchhhCCcccEEeec
Confidence 467999999999999999987654
No 84
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=81.37 E-value=0.27 Score=31.64 Aligned_cols=22 Identities=18% Similarity=0.048 Sum_probs=20.2
Q ss_pred cccccccccccccCCCCCceee
Q psy2242 212 AQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 212 ~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
.+.|+.|+.|...||++.|+++
T Consensus 38 ~~~c~~C~~C~~~CP~~Ai~~~ 59 (60)
T 1rof_A 38 ETDLPCAKDAADSCPTGAISVE 59 (60)
T ss_dssp SCCSTTHHHHHHHCTTCCEECC
T ss_pred hhhHHHHHHHHHhCCHhHEEEe
Confidence 7899999999999999999864
No 85
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=81.37 E-value=0.62 Score=41.08 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=25.5
Q ss_pred cceEEecccccccccccccCCCCCceeeC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
..+.|+.+.|+.|+.|...||++.|++..
T Consensus 124 g~v~id~~~CigCg~C~~~CP~~ai~~~~ 152 (294)
T 1kqf_B 124 GIVDFQSENCIGCGYCIAGCPFNIPRLNK 152 (294)
T ss_dssp SCEEECGGGCCCCCHHHHHCTTCCCEEET
T ss_pred cceEeCcccCCCcchhhhcCCCCCcEecC
Confidence 36789999999999999999999998764
No 86
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=81.36 E-value=1.9 Score=36.92 Aligned_cols=42 Identities=19% Similarity=0.171 Sum_probs=33.4
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCC
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGD 128 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~ 128 (246)
..+++.++||+++.- .+-++.|+..|+.||+.|...|.....
T Consensus 275 ~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~~~~~ 316 (325)
T 2q7v_A 275 NIPMLFAAGDVSDYI----YRQLATSVGAGTRAAMMTERQLAALEV 316 (325)
T ss_dssp SSTTEEECSTTTCSS----CCCHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCCEEEeecccCcc----HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 357999999999862 245889999999999999998875443
No 87
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=81.35 E-value=0.45 Score=32.81 Aligned_cols=25 Identities=20% Similarity=0.259 Sum_probs=22.2
Q ss_pred EEecccccc--cccccccCCCCCceee
Q psy2242 209 QINAQNCIH--CKTCDIKDPTQNINWV 233 (246)
Q Consensus 209 ~i~~~nc~~--c~~c~i~~p~~~i~w~ 233 (246)
.|+.+.|++ |+.|.-.||.+.|.+.
T Consensus 2 ~i~~~~C~~c~C~~C~~~CP~~ai~~~ 28 (78)
T 1h98_A 2 HVICEPCIGVKDQSCVEVCPVECIYDG 28 (78)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEEchhCCCCCcChhhhhcCccceEcC
Confidence 468899999 9999999999999874
No 88
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=81.24 E-value=1.8 Score=36.74 Aligned_cols=38 Identities=24% Similarity=0.101 Sum_probs=31.6
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
..+++.++||+++.- .+-++.|+..|+.||..|.+.|+
T Consensus 272 ~~~~vya~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~l~ 309 (311)
T 2q0l_A 272 NVQGLFAAGDIRIFA----PKQVVCAASDGATAALSVISYLE 309 (311)
T ss_dssp SSTTEEECSTTBTTC----CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEcccccCcc----hHHHHHHHHhHHHHHHHHHHHHh
Confidence 468999999999852 24578999999999999988775
No 89
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=80.64 E-value=0.49 Score=34.57 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=22.2
Q ss_pred EEeccccccc--ccccccCCCCCceee
Q psy2242 209 QINAQNCIHC--KTCDIKDPTQNINWV 233 (246)
Q Consensus 209 ~i~~~nc~~c--~~c~i~~p~~~i~w~ 233 (246)
.|+..+|++| +.|.-.||.+.|.+.
T Consensus 2 ~i~~~~C~~C~c~~C~~~CP~~ai~~~ 28 (105)
T 2v2k_A 2 YVIAEPCVDVKDKACIEECPVDCIYEG 28 (105)
T ss_dssp EEECGGGTTTCCCHHHHHCTTCCEEEC
T ss_pred EEecccCCCCCcChhhhhcCccccCcC
Confidence 5788999988 999999999999864
No 90
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=78.32 E-value=2.5 Score=36.54 Aligned_cols=41 Identities=27% Similarity=0.182 Sum_probs=33.1
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
...+++.++||+++.- .+-.+.|+..|+.||..|...|...
T Consensus 278 t~~~~iya~GD~~~~~----~~~~~~A~~~g~~aA~~i~~~l~~~ 318 (335)
T 2a87_A 278 TSLPGVFAAGDLVDRT----YRQAVTAAGSGCAAAIDAERWLAEH 318 (335)
T ss_dssp CSSTTEEECGGGTCCS----CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeecCCcc----HHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 3468999999999852 2457889999999999999888643
No 91
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=77.32 E-value=0.82 Score=42.33 Aligned_cols=25 Identities=28% Similarity=0.557 Sum_probs=20.7
Q ss_pred eEE-ecccccccccccccCCCCCcee
Q psy2242 208 LQI-NAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 208 ~~i-~~~nc~~c~~c~i~~p~~~i~w 232 (246)
..| +...|+.|+.|...||++.|.+
T Consensus 58 ~~i~~~~~C~~Cg~C~~~CP~~Ai~~ 83 (421)
T 1hfe_L 58 HSIPHIEACINCGQCLTHCPENAIYE 83 (421)
T ss_dssp CBCCCGGGCCCCCTTGGGCTTCCEEE
T ss_pred eeecChhhCCchhhHHHhhCcCCccc
Confidence 345 8888999999999999888877
No 92
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=76.90 E-value=0.68 Score=42.87 Aligned_cols=27 Identities=37% Similarity=0.570 Sum_probs=24.8
Q ss_pred ceEEecccccccccccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
.+.++.+.|++|+.|.-.||.+.|...
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~~ 53 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFGE 53 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBCC
T ss_pred eEEECcccCCCccHHHHhcCcCceecc
Confidence 789999999999999999999988754
No 93
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=76.60 E-value=1.5 Score=36.23 Aligned_cols=36 Identities=19% Similarity=0.090 Sum_probs=27.9
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
...||+.++||+| .... ...||.+|+.||+.|.+.|
T Consensus 196 t~~p~iya~G~~a--~~g~----~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV--REGD----YARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT--SCCC----HHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc--cCcc----HHHHHHHHHHHHHHHHhhc
Confidence 4689999999999 3331 2246899999999998754
No 94
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=76.49 E-value=1.1 Score=42.78 Aligned_cols=30 Identities=17% Similarity=0.280 Sum_probs=26.3
Q ss_pred cceEEecccccccccccccCCCCCceeeCC
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINWVVP 235 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w~~p 235 (246)
..+.||.+.|+.|+.|...||++.|.+..-
T Consensus 208 g~v~id~~kCigCg~Cv~~CP~~AI~~~~~ 237 (512)
T 1q16_B 208 GIVLIDQDKCRGWRMCITGCPYKKIYFNWK 237 (512)
T ss_dssp CCEEECTTTCCCCCCHHHHCTTCCEEEETT
T ss_pred CeEEECHHHCCCchHHHhhCCccceecccC
Confidence 368899999999999999999999988753
No 95
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=76.44 E-value=0.83 Score=48.04 Aligned_cols=27 Identities=33% Similarity=0.533 Sum_probs=24.2
Q ss_pred ceEEecccccccccccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
...+|..+|++|+.|...||+..|+..
T Consensus 680 ~p~~d~~kCi~Cg~Cv~vCP~~AI~~~ 706 (1231)
T 2c42_A 680 VPQWVPENCIQCNQCAFVCPHSAILPV 706 (1231)
T ss_dssp EEEECTTTCCCCCHHHHHCSSCCEEEE
T ss_pred ceEEeCccCCchhhHHHhCCccccccc
Confidence 346899999999999999999999875
No 96
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=75.27 E-value=0.47 Score=31.18 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=20.7
Q ss_pred ecccccccccccccCCCCCceee
Q psy2242 211 NAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
+...|++|+.|.-.||++.|+++
T Consensus 40 ~~~~C~~C~~C~~~CP~~Ai~~~ 62 (64)
T 1dax_A 40 EGASQEEVEEAMDTCPVQCIHWE 62 (64)
T ss_dssp GGSCHHHHHHHHHHSSSCCEECC
T ss_pred CCcchhHHHHHHHhCCHhhEeee
Confidence 37899999999999999999875
No 97
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=74.96 E-value=2.7 Score=37.71 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=28.8
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
.+|+.++||+- .+.||+-|+.||+.||+.|.+.|
T Consensus 435 ~~~l~~aG~~~------~g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 435 YPGVYMTGASF------EGVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecC------CCCCHHHHHHHHHHHHHHHHHHh
Confidence 47999999952 35689999999999999998876
No 98
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=74.71 E-value=0.71 Score=32.40 Aligned_cols=27 Identities=30% Similarity=0.525 Sum_probs=24.3
Q ss_pred ceEEecccccccc------cccccCCC-CCceee
Q psy2242 207 RLQINAQNCIHCK------TCDIKDPT-QNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~------~c~i~~p~-~~i~w~ 233 (246)
...++.+.|+.|+ .|.-.||+ +.|++.
T Consensus 29 ~~~~~~~~C~~C~~~~~~~~C~~~CP~~~Ai~~~ 62 (85)
T 2zvs_A 29 IYEINSDKCTECVGHYETPTCQKVCPIPNTIVKD 62 (85)
T ss_dssp SCEECGGGCCTTTTTCSSCHHHHHCSSCCEEECT
T ss_pred ceEEeChhccCCCCcCCccHhhHhCcCCCCEEec
Confidence 5788999999999 99999999 888875
No 99
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=73.87 E-value=1.4 Score=40.14 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=22.9
Q ss_pred ceEEecccccccccccccCCCCCceeeC
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~~ 234 (246)
.+.|+...|+.|+.|.-.||++.|.+..
T Consensus 176 ~v~id~~kCigCg~Cv~aCP~~Ai~~~~ 203 (352)
T 2ivf_B 176 IVLVDQERCKGHRHCVEACPYKAIYFNP 203 (352)
T ss_dssp CEEECTTTCCCCCHHHHHCTTCCEEEET
T ss_pred eEEechhhcCCchHHHhhcCccceeccc
Confidence 5778888888888888888888887764
No 100
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=73.13 E-value=3.3 Score=35.43 Aligned_cols=41 Identities=15% Similarity=0.124 Sum_probs=32.7
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
..+++.++||+++.-+ ...=++.|+..|..||+.|...|..
T Consensus 278 ~~~~vya~GD~~~~~~--~~~~~~~A~~~g~~aa~~i~~~l~~ 318 (335)
T 2zbw_A 278 SIPGVYACGDIVTYPG--KLPLIVLGFGEAAIAANHAAAYANP 318 (335)
T ss_dssp SSTTEEECSTTEECTT--CCCCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCEEEeccccccCc--chhhhhhhHHHHHHHHHHHHHHhhh
Confidence 4589999999998643 2245788999999999999988853
No 101
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=72.12 E-value=2.1 Score=40.92 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=33.8
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
.-+|+..+||.||.. .||..|..+|..|||+|++.+.
T Consensus 507 ~~~gly~~GegaG~a-----~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 507 NLKGFYPAGEGAGYA-----GGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp TCBTEEECHHHHTSC-----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCChh-----hHHHHHHHHHHHHHHHHHHHhh
Confidence 568999999999975 8999999999999999998775
No 102
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=71.88 E-value=2.3 Score=38.70 Aligned_cols=39 Identities=18% Similarity=0.213 Sum_probs=29.0
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCC
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGD 128 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~ 128 (246)
.+|+.++||+- .+.||+-|+.||+.||+.|.+.+...|.
T Consensus 432 ~~~l~~aG~~~------~g~g~~~a~~sG~~aA~~i~~~l~~~~~ 470 (475)
T 3lov_A 432 YPGIYLAGLAY------DGVGLPDCVASAKTMIESIELEQSHTDE 470 (475)
T ss_dssp STTEEECSTTT------SCSSHHHHHHHHHHHHHHHHHTC-----
T ss_pred CCCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHHhhcccc
Confidence 37999999953 2458999999999999999988866554
No 103
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=71.35 E-value=3.8 Score=37.40 Aligned_cols=37 Identities=19% Similarity=0.058 Sum_probs=31.9
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
.+++.++|++... ...||+-|+.||+.||+.|.+.++
T Consensus 450 ~~~l~faG~~~~~----~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 450 VDKIYFAGDHLSN----AIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp BTTEEECSGGGBS----STTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeEHHhcc----CccHHHHHHHHHHHHHHHHHHHHh
Confidence 3799999998763 467899999999999999998886
No 104
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=70.86 E-value=2.9 Score=38.25 Aligned_cols=40 Identities=15% Similarity=-0.017 Sum_probs=31.9
Q ss_pred ccccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 81 kl~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
+..-+++.++||.|+.-++.++. =.+.|++.|++||+.|+
T Consensus 265 ~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~ 309 (437)
T 4eqs_A 265 ETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIA 309 (437)
T ss_dssp BCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHc
Confidence 34568999999999987765543 35789999999999875
No 105
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=69.95 E-value=4.8 Score=37.70 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=32.5
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
..+++.++||+++.- .+-+..|+..|..||..|.+.|..
T Consensus 479 s~p~VfA~GD~~~~~----~~~~~~A~~~g~~aa~~i~~~L~~ 517 (521)
T 1hyu_A 479 SVKGVFAAGDCTTVP----YKQIIIATGEGAKASLSAFDYLIR 517 (521)
T ss_dssp SSTTEEECSTTBCCS----SCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCC----cceeeehHHhHHHHHHHHHHHHHh
Confidence 348999999999852 245789999999999999998864
No 106
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=69.79 E-value=5.2 Score=36.44 Aligned_cols=42 Identities=17% Similarity=-0.011 Sum_probs=34.4
Q ss_pred CCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCCC
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGDE 129 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~s 129 (246)
+++.++||+... -...+|+-|+.||+.||+.|.+.+......
T Consensus 423 ~~l~fAG~~t~~---~~~g~v~GA~~SG~~aA~~i~~~l~~~~~~ 464 (472)
T 1b37_A 423 GRVYFTGEHTSE---HYNGYVHGAYLSGIDSAEILINCAQKKMCK 464 (472)
T ss_dssp TTEEECSGGGCT---TTTTSHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred CcEEEeecccCC---CCCCchhHHHHHHHHHHHHHHHHHHhCcCC
Confidence 699999998753 235688999999999999999999876653
No 107
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=69.62 E-value=1.1 Score=30.93 Aligned_cols=28 Identities=11% Similarity=-0.184 Sum_probs=23.6
Q ss_pred EecccccccccccccCCCCCceeeCCCC
Q psy2242 210 INAQNCIHCKTCDIKDPTQNINWVVPEG 237 (246)
Q Consensus 210 i~~~nc~~c~~c~i~~p~~~i~w~~p~g 237 (246)
++...|..|+.|.-.||++.|++.-.+.
T Consensus 46 ~~~~~c~~C~~C~~~CP~~AI~~~~~~~ 73 (81)
T 1iqz_A 46 VPDILIDDMMDAFEGCPTDSIKVADEPF 73 (81)
T ss_dssp CCGGGHHHHHHHHHHCTTCCEEEESSCC
T ss_pred CCHHHHHHHHHHHHhCCHhHEEEecCCC
Confidence 3467899999999999999999986543
No 108
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=69.41 E-value=1.4 Score=36.83 Aligned_cols=30 Identities=7% Similarity=-0.115 Sum_probs=25.7
Q ss_pred cceEEeccccc--ccccccccCCCCCceeeCC
Q psy2242 206 ERLQINAQNCI--HCKTCDIKDPTQNINWVVP 235 (246)
Q Consensus 206 ~~~~i~~~nc~--~c~~c~i~~p~~~i~w~~p 235 (246)
..+.|+.+.|+ .|+.|...||++.|.+...
T Consensus 99 g~v~id~~~C~~~~C~~C~~~CP~~Ai~~~~~ 130 (214)
T 1h0h_B 99 GCVLFTPKTKDLEDYESVISACPYDVPRKVAE 130 (214)
T ss_dssp CCEEECGGGGGCSCHHHHHHHCTTCCCEECTT
T ss_pred CeEEEeHHHCccccccHHHHhcCCCCeEecCC
Confidence 36789999999 9999999999999988643
No 109
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=69.07 E-value=5.5 Score=35.92 Aligned_cols=44 Identities=14% Similarity=0.044 Sum_probs=35.0
Q ss_pred ccCCEEEeccCccCCCC----c---ccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 83 TFPGGCLVGCTAGFLNV----P---KIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp----~---~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
..+++.++||+++.-++ + ..+=.+.|+..|+.||+.|.+.|+..
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~ 335 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 57899999999998652 1 22446889999999999999999643
No 110
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=68.96 E-value=5.2 Score=34.74 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=32.2
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
..+++.++||++..-+. .+-++.|+..|..||+.|...|.
T Consensus 289 ~~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~ 328 (360)
T 3ab1_A 289 SVDGLYAAGDIAYYPGK--LKIIQTGLSEATMAVRHSLSYIK 328 (360)
T ss_dssp SSTTEEECSTTEECTTC--CCSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEecCccCCCCc--cceeehhHHHHHHHHHHHHhhcC
Confidence 45899999999986432 34578899999999999998874
No 111
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=68.72 E-value=1.5 Score=42.60 Aligned_cols=27 Identities=30% Similarity=0.424 Sum_probs=24.3
Q ss_pred cceEEecccccccccccccCCCCCcee
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i~w 232 (246)
++-.|+-+-|+-||-|.-|||++.|+=
T Consensus 46 ~~~~i~~~~c~~~~~~~~~cp~~~i~i 72 (608)
T 3j16_B 46 KIAFISEILCIGCGICVKKCPFDAIQI 72 (608)
T ss_dssp TEEEECTTTCCCCCHHHHHCSSCCEEE
T ss_pred CceEEehhhccccccccccCCccceEE
Confidence 578999999999999999999997754
No 112
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=68.54 E-value=3.6 Score=36.98 Aligned_cols=39 Identities=18% Similarity=0.056 Sum_probs=31.1
Q ss_pred ccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 81 kl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
+...+++.++||+|.+-++.. +-.+.|+..|+.||+.+.
T Consensus 254 ~t~~~~IyA~GD~a~~~~~~~-~~~~~A~~qg~~aa~~i~ 292 (385)
T 3klj_A 254 ETSIKDIYACGDVAEFYGKNP-GLINIANKQGEVAGLNAC 292 (385)
T ss_dssp BCSSTTEEECGGGEEETTBCC-CCHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEEeeEecCCCcc-cHHHHHHHHHHHHHHHhc
Confidence 345799999999999766533 246889999999999875
No 113
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=68.51 E-value=7.4 Score=34.43 Aligned_cols=43 Identities=21% Similarity=0.125 Sum_probs=33.3
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
...|++..+||+|.... ..+=-+.|+..|+.||+.|.+.|+..
T Consensus 284 t~~p~VfAiGDva~~~~--~pk~a~~A~~qa~v~A~ni~~~l~G~ 326 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAP--MPKSAYSANSQAKVAAAAVVALLKGE 326 (401)
T ss_dssp SSSTTEEECGGGBCCTT--SCBSHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEecccccCCC--CCchHHHHHHHHHHHHHHHHHHhcCC
Confidence 34589999999987542 12335789999999999999999743
No 114
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=68.35 E-value=3.1 Score=37.52 Aligned_cols=39 Identities=21% Similarity=0.089 Sum_probs=31.5
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++..++.+++ =++.|+..|+.||+.|.
T Consensus 263 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 306 (408)
T 2gqw_A 263 TTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLV 306 (408)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhc
Confidence 3468999999999987766543 35789999999999885
No 115
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=68.32 E-value=3.3 Score=37.21 Aligned_cols=39 Identities=18% Similarity=0.057 Sum_probs=31.9
Q ss_pred cccCCEEEeccCccCCCCcc-c-----ccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPK-I-----KGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~-~-----~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+|.+.++++ + +=.+.|+..|+.||+.+.
T Consensus 275 t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 319 (415)
T 3lxd_A 275 TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDIC 319 (415)
T ss_dssp CSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHhc
Confidence 44689999999999887765 3 236899999999999875
No 116
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=68.31 E-value=3.2 Score=38.81 Aligned_cols=39 Identities=18% Similarity=0.153 Sum_probs=31.8
Q ss_pred cccCCEEEeccCccCCCCccccc-----chhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKG-----THNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~G-----i~~Am~SG~lAAeai~ 120 (246)
...+++.++||++.+-++.++.- .+.|+..|+.||+.|.
T Consensus 293 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 336 (565)
T 3ntd_A 293 TSDPAIYAVGDAVEEQDFVTGQACLVPLAGPANRQGRMAADNMF 336 (565)
T ss_dssp CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeeeeEeeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 45689999999998777665543 6789999999999886
No 117
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=68.11 E-value=3.2 Score=38.74 Aligned_cols=46 Identities=17% Similarity=-0.114 Sum_probs=35.1
Q ss_pred ccccCC-EEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCC
Q psy2242 81 RLTFPG-GCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAG 127 (246)
Q Consensus 81 kl~~~G-~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd 127 (246)
+...++ ++|+||||=-.-|..++|+..+|.++.-+|..+...+ +|.
T Consensus 389 ~~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~-~g~ 435 (497)
T 2bry_A 389 KHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWA-EGA 435 (497)
T ss_dssp ETTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred hcCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHh-CCC
Confidence 444566 9999999921222399999999999999999988875 454
No 118
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=68.08 E-value=4.1 Score=36.33 Aligned_cols=40 Identities=20% Similarity=0.111 Sum_probs=32.7
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
..+++.++||++.+-.| +=.+.|...|..||+.|...+..
T Consensus 298 ~~~~vfa~GD~~~~~~~---~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVP---KLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp SCTTEEECGGGBTTCCS---CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeehhccCCCC---cHHHHHHHHHHHHHHHHHHHhcC
Confidence 56899999999987333 44688999999999999998843
No 119
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=67.91 E-value=2.5 Score=37.86 Aligned_cols=39 Identities=21% Similarity=0.047 Sum_probs=31.8
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+|...+|..+. =++.|+..|+.||+.+.
T Consensus 265 t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 308 (404)
T 3fg2_P 265 TSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLT 308 (404)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhC
Confidence 4468999999999988776543 36899999999999875
No 120
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=67.74 E-value=3.3 Score=37.27 Aligned_cols=38 Identities=21% Similarity=0.030 Sum_probs=30.9
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+|++-++. +. =++.|+..|+.||+.+.
T Consensus 265 t~~~~IyA~GD~a~~~~~~-g~~~~~~~~~~A~~qg~~aa~~i~ 307 (410)
T 3ef6_A 265 TLAKGVFAVGDVASWPLRA-GGRRSLETYMNAQRQAAAVAAAIL 307 (410)
T ss_dssp CSSTTEEECGGGEEEEBTT-SSEECCCCHHHHHHHHHHHHHHHT
T ss_pred ECCCCEEEEEcceeccCCC-CCeeeechHHHHHHHHHHHHHHHc
Confidence 4568999999999987764 22 25899999999999885
No 121
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=66.96 E-value=2.7 Score=38.13 Aligned_cols=35 Identities=23% Similarity=0.319 Sum_probs=27.4
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
.+|+.++||+. .+.||+-|+.||+.||+.|.+.+.
T Consensus 440 ~~~l~~aG~~~------~g~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 440 LPGLHLIGNAY------KGVGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHCC---
T ss_pred CCCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHhhc
Confidence 37999999983 245899999999999999987664
No 122
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=66.79 E-value=5.8 Score=36.66 Aligned_cols=39 Identities=18% Similarity=0.000 Sum_probs=32.0
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
...++++++||++.. | .=+..|+..|+.||+.|...|..
T Consensus 407 Ts~~~VfA~GD~~~g--~---~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRG--A---SLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp CSSTTEEECGGGGSS--C---CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccCC--c---hHHHHHHHHHHHHHHHHHHHhhc
Confidence 446899999999864 2 33789999999999999998864
No 123
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=66.65 E-value=5.4 Score=36.47 Aligned_cols=35 Identities=29% Similarity=0.312 Sum_probs=30.1
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
.+|+.++|++.. +-||+-|+.||+.||+.|.+.+.
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~ 494 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLE 494 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 479999999853 34899999999999999998874
No 124
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=66.34 E-value=4.6 Score=36.69 Aligned_cols=39 Identities=15% Similarity=-0.003 Sum_probs=31.8
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||++..-++.+++ =.+.|+..|+.||+.+.
T Consensus 270 t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~ 313 (449)
T 3kd9_A 270 TSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIA 313 (449)
T ss_dssp CSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhc
Confidence 4568999999999987776553 45889999999998875
No 125
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=65.24 E-value=5.8 Score=35.90 Aligned_cols=44 Identities=11% Similarity=-0.059 Sum_probs=34.8
Q ss_pred ccCCEEEeccCccCCCCc-------ccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 83 TFPGGCLVGCTAGFLNVP-------KIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~-------~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
..+++.++||++..-++- ..+=.+.|+..|..||+.|.+.|+..
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~ 346 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGR 346 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCC
Confidence 568999999999986521 23446789999999999999988643
No 126
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=65.17 E-value=5.4 Score=33.93 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=30.0
Q ss_pred cccCCEEEec--cCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVG--CTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 82 l~~~G~llVG--DAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
...+++.++| |+++. ..+-+..|+..|+.||+.|.+.|+
T Consensus 312 t~~~~vya~Gd~d~~~~----~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 312 LAVPSVWLLGYGDWNGM----ASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp SSCTTEEECSSCGGGST----TCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred CCCCCeEEecccccccc----chhhhhhhHHHHHHHHHHHHHHHH
Confidence 3568999999 66652 234566699999999999998874
No 127
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=64.62 E-value=3.1 Score=37.89 Aligned_cols=38 Identities=18% Similarity=0.070 Sum_probs=31.4
Q ss_pred ccCCEEEeccCccCCCCccc-----ccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKI-----KGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~-----~Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||+++..++.++ .-.+.|+..|+.||+.|.
T Consensus 273 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 315 (452)
T 2cdu_A 273 SNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLT 315 (452)
T ss_dssp SSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhC
Confidence 45899999999998776554 347899999999998875
No 128
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=64.26 E-value=22 Score=31.00 Aligned_cols=39 Identities=13% Similarity=0.069 Sum_probs=29.1
Q ss_pred ccCCEEEeccCc--cCC--CCcccccchhHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTA--GFL--NVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 83 ~~~G~llVGDAA--G~v--dp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
..|+..+||+.. +++ ..+.+.|+..|...|+++|+.|..
T Consensus 332 t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~g 374 (405)
T 2gag_B 332 TMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIAN 374 (405)
T ss_dssp ETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHHH
T ss_pred CCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHhC
Confidence 357777888864 433 456778999999999999988753
No 129
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=64.13 E-value=2.8 Score=33.92 Aligned_cols=35 Identities=20% Similarity=0.098 Sum_probs=28.6
Q ss_pred CCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
+++.++|++... .+-+ |+=|+.||+.||+.|.+.+
T Consensus 118 grl~FAGe~ts~-~~g~---~eGAl~SG~raA~~i~~~l 152 (181)
T 2e1m_C 118 GPVYFAGEHVSL-KHAW---IEGAVETAVRAAIAVNEAP 152 (181)
T ss_dssp TTEEECSGGGTT-STTS---HHHHHHHHHHHHHHHHTCC
T ss_pred CcEEEEEHHHcC-CccC---HHHHHHHHHHHHHHHHHHh
Confidence 689999999884 4545 4559999999999998766
No 130
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=63.51 E-value=5.1 Score=36.87 Aligned_cols=38 Identities=24% Similarity=0.058 Sum_probs=30.9
Q ss_pred ccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||++...++.+++ =.+.|+..|+.||+.|.
T Consensus 309 s~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 351 (480)
T 3cgb_A 309 NVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNML 351 (480)
T ss_dssp SSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhc
Confidence 458999999999887665543 36899999999999875
No 131
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=62.88 E-value=5.7 Score=36.82 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=30.1
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
..+++.++||+++. ..+..|+..|++||+.|...+
T Consensus 342 s~~~vya~GD~~~~------~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 342 IKDGIYVAGSAVSI------KPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EETTEEECSTTTCC------CCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeccCCc------cCHHHHHHHHHHHHHHHHHHc
Confidence 46899999999984 357899999999999998766
No 132
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=62.51 E-value=4.4 Score=36.84 Aligned_cols=39 Identities=21% Similarity=0.040 Sum_probs=31.3
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++..+|.++. =++.|+..|+.||+.|.
T Consensus 274 ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 317 (431)
T 1q1r_A 274 TSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAAILC 317 (431)
T ss_dssp CSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHHHhc
Confidence 4568999999999987765432 35789999999999875
No 133
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=62.17 E-value=5 Score=37.90 Aligned_cols=39 Identities=13% Similarity=0.026 Sum_probs=31.4
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||++.+.++.++. -.+.|+..|++||+.|.
T Consensus 308 t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 351 (588)
T 3ics_A 308 TSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIH 351 (588)
T ss_dssp CSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHhc
Confidence 4468999999999877766543 45789999999999875
No 134
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=61.72 E-value=6.2 Score=35.42 Aligned_cols=37 Identities=8% Similarity=-0.066 Sum_probs=29.5
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
.+++.++||+....-| .+|+-|+.||+.||+.|.+.+
T Consensus 415 ~~~l~~aG~~~~~~~~---g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 415 VGPIHFSCSDIAAEGY---QHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp BTTEEECCGGGCSTTT---TSHHHHHHHHHHHHHHHHHHC
T ss_pred cCceEEeecccccccc---cchHHHHHHHHHHHHHHHHHh
Confidence 3799999998754323 268889999999999998765
No 135
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=61.43 E-value=7.8 Score=31.72 Aligned_cols=28 Identities=21% Similarity=0.475 Sum_probs=25.1
Q ss_pred cceEEecccccccc--cccccCCCCCceee
Q psy2242 206 ERLQINAQNCIHCK--TCDIKDPTQNINWV 233 (246)
Q Consensus 206 ~~~~i~~~nc~~c~--~c~i~~p~~~i~w~ 233 (246)
.++.++...|+||+ .|.-.||++.|.+.
T Consensus 49 ~~~~~~~~~C~~C~~p~C~~~CP~gAi~~~ 78 (195)
T 2vpz_B 49 LVVEFRPEQCLHCENPPCVPVCPTGASYQT 78 (195)
T ss_dssp CEEEEEEEECCCCSSCTTTTTCSSSCEEEC
T ss_pred eeEEECcccCcCccCcHHHHhcCCCceecc
Confidence 56788999999999 79999999999875
No 136
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=61.29 E-value=5.4 Score=36.79 Aligned_cols=38 Identities=24% Similarity=0.365 Sum_probs=30.9
Q ss_pred ccCCEEEeccCccCCCCccc-----ccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKI-----KGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~-----~Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||+++..++.++ .=.+.|+..|+.||+.|.
T Consensus 317 ~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 359 (490)
T 2bc0_A 317 SIPGVYAIGDCATIYDNATRDTNYIALASNAVRTGIVAAHNAC 359 (490)
T ss_dssp SSTTEEECGGGBCEEETTTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeeeeEEeccccCCceeecccHHHHHHHHHHHHHHhc
Confidence 45899999999998765544 346899999999999885
No 137
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=60.34 E-value=5.8 Score=36.26 Aligned_cols=39 Identities=15% Similarity=-0.044 Sum_probs=31.4
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||++.+-++.+++ =.+.|+..|+.||+.|.
T Consensus 284 t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~ 327 (472)
T 3iwa_A 284 TSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLA 327 (472)
T ss_dssp CSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 3468999999999877766554 35789999999999876
No 138
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=60.16 E-value=2.4 Score=38.71 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=31.2
Q ss_pred cccCCEEEeccCccCCCCcccc-----cchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIK-----GTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~-----Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.-++.+++ -.+.|+..|+.||+.|.
T Consensus 269 t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 269 TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp CSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred CCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 3468999999999987655543 57889999999998765
No 139
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=60.05 E-value=3 Score=37.88 Aligned_cols=29 Identities=28% Similarity=0.320 Sum_probs=24.9
Q ss_pred cceEEecccccccc--cccccCCCCCceeeC
Q psy2242 206 ERLQINAQNCIHCK--TCDIKDPTQNINWVV 234 (246)
Q Consensus 206 ~~~~i~~~nc~~c~--~c~i~~p~~~i~w~~ 234 (246)
..+.++...|+||+ .|.-.||++.|....
T Consensus 142 ~~~~~~~~~C~~C~~~~Cv~~CP~gAi~~~~ 172 (352)
T 2ivf_B 142 PFFFYLARMCNHCTNPACLAACPTGAIYKRE 172 (352)
T ss_dssp EECEEEEECCCCCSSCHHHHHCTTCCEEECT
T ss_pred eEEEECCCCCcCcCCccccccCCCCceeecC
Confidence 46778999999999 999999999987653
No 140
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=59.87 E-value=4.7 Score=35.96 Aligned_cols=30 Identities=23% Similarity=0.092 Sum_probs=25.0
Q ss_pred CCEEEeccCccCCCCcccccc--hhHHHHHHHHHHHH
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGT--HNAMKSGMLAAEAT 119 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi--~~Am~SG~lAAeai 119 (246)
+|+.++||... |. .|+ .-|+.||+.||++|
T Consensus 372 ~gl~laGd~~~---~~--~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 372 NEVLVVGDGYR---PP--GGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp SSEEECSTTCC---CT--TCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCccc---CC--CceeeehHHHHHHHHHHHh
Confidence 99999999985 22 244 77999999999998
No 141
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=59.79 E-value=7.5 Score=35.54 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=28.7
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++. ..-.+.|+..|+.||+.|..
T Consensus 298 t~~~~Iya~GD~~~~-----~~~~~~A~~~g~~aa~~i~~ 332 (466)
T 3l8k_A 298 TNIPNVFATGDANGL-----APYYHAAVRMSIAAANNIMA 332 (466)
T ss_dssp CSSTTEEECGGGTCS-----CCSHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEecCCC-----CccHhHHHHHHHHHHHHHhC
Confidence 355899999999986 24468899999999998863
No 142
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=58.98 E-value=4.6 Score=37.50 Aligned_cols=37 Identities=24% Similarity=0.214 Sum_probs=29.3
Q ss_pred cCCEEEeccCccCCCCccccc----chhHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKG----THNAMKSGMLAAEATY 120 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~G----i~~Am~SG~lAAeai~ 120 (246)
.+++.++||+|++.++.+++- ...|+..|++||+.+.
T Consensus 310 ~~~IyA~GD~a~~~~~~~g~~~~~~~~~A~~qg~~aa~ni~ 350 (493)
T 1m6i_A 310 RSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMT 350 (493)
T ss_dssp ETTEEECGGGEEEEETTTEEECCCCHHHHHHHHHHHHHHHT
T ss_pred CCCeeEeeeeEeccCcccCccccchHHHHHHHHHHHHHHhc
Confidence 479999999999887764431 2389999999998875
No 143
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=58.78 E-value=1.9 Score=41.45 Aligned_cols=27 Identities=22% Similarity=0.474 Sum_probs=24.0
Q ss_pred ceEEecccccccccccccCCCCCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i~w~ 233 (246)
...|+...|+.|+.|.-.||+..|+.+
T Consensus 182 ~~~i~~~~Ci~Cg~Cv~~CP~gAi~~~ 208 (574)
T 3c8y_A 182 EKCFDDTNCLLCGQCIIACPVAALSEK 208 (574)
T ss_dssp GCCGGGSSCCCCCHHHHHCSSTTEEEC
T ss_pred cceechhhCCcchhHHHhhccCCcccc
Confidence 356889999999999999999999875
No 144
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=58.73 E-value=3.9 Score=35.41 Aligned_cols=33 Identities=15% Similarity=-0.041 Sum_probs=27.5
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
..+|+.++||.-. +-||.-|+.||+.||+.|.+
T Consensus 308 ~~~~l~laGd~~~------g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 308 HKPFLACGGDGFT------QSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp TTTEEEECSGGGS------CSSHHHHHHHHHHHHHHHTT
T ss_pred CCccEEEEccccC------CCCccHHHHHHHHHHHHHHh
Confidence 3488999999864 34999999999999998865
No 145
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=58.01 E-value=3.1 Score=43.74 Aligned_cols=27 Identities=30% Similarity=0.640 Sum_probs=23.7
Q ss_pred ceEEecccccccccccccCCC--CCceee
Q psy2242 207 RLQINAQNCIHCKTCDIKDPT--QNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~--~~i~w~ 233 (246)
.++|+...|+.|+.|.-.||. ..|+.+
T Consensus 736 ~~~v~~~~C~gCG~Cv~vCP~~~~AI~~~ 764 (1231)
T 2c42_A 736 RIQINTLDCMGCGNCADICPPKEKALVMQ 764 (1231)
T ss_dssp EEEECTTTCCCCCHHHHHCSSSSCSEEEE
T ss_pred ceeechhhCCChhHHHhhCCCCccCeEEe
Confidence 467999999999999999999 777654
No 146
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=57.49 E-value=8.7 Score=35.02 Aligned_cols=38 Identities=18% Similarity=0.105 Sum_probs=30.1
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
.+++.++||+...-.+ .-|+-|+.||+.||+.|.+.+.
T Consensus 449 ~~~l~fAGe~t~~~~~---g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 449 HGGVVFANSDWALGWR---SFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp BTTEEECCGGGCSSST---TSHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEechhhhcCCc---eEEEhHHHHHHHHHHHHHHHhc
Confidence 4689999998653223 3377799999999999999884
No 147
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=56.11 E-value=9.4 Score=34.40 Aligned_cols=32 Identities=19% Similarity=0.100 Sum_probs=27.1
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
.+++.++||. +.+-||.-|+.||+.||+.|..
T Consensus 441 ~~~l~l~G~~------~~G~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 441 RLPLTLAGAS------YEGVAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TCSEEECSTT------TSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccC------CCCCcHHHHHHHHHHHHHHHHh
Confidence 4689999987 2466999999999999999865
No 148
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=56.01 E-value=11 Score=34.91 Aligned_cols=40 Identities=15% Similarity=-0.082 Sum_probs=32.2
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
.+++.++|++...--+-+. |=|+.||..||+.|.+.+...
T Consensus 471 ~~rl~FAGe~ts~~~~g~v---~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 471 DSRIRFAGEHTIMDGAGCA---YGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp SSSEEECSTTSCSTTBTSH---HHHHHHHHHHHHHHHHHHHGG
T ss_pred CCcEEEeccccccCCCccc---hhHHHHHHHHHHHHHHHhhhh
Confidence 4689999999876545554 459999999999999988643
No 149
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=55.77 E-value=7.3 Score=33.61 Aligned_cols=40 Identities=13% Similarity=-0.043 Sum_probs=27.8
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
..+++.++||++..-++.. ..++.|...|..+|+.+...+
T Consensus 299 ~~~~v~a~GD~~~~~~~~~-~~~~~~~~~a~~~a~~l~~~~ 338 (369)
T 3d1c_A 299 RYPNIFMIGATVENDNAKL-CYIYKFRARFAVLAHLLTQRE 338 (369)
T ss_dssp SSTTEEECSTTCCCSSCCC-CSHHHHGGGHHHHHHHHHHHT
T ss_pred CCCCeEEeccccccCCeeE-EEEehhhHHHHHHHHHHhccc
Confidence 4589999999998766543 355666666777777665543
No 150
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=54.50 E-value=5.3 Score=36.25 Aligned_cols=38 Identities=24% Similarity=0.107 Sum_probs=30.3
Q ss_pred ccCCEEEeccCccCCCCccc-----ccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKI-----KGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~-----~Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||+++..++.++ .=.+.|+..|+.||+.|.
T Consensus 272 ~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 272 SEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp SSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred CCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 45899999999997665443 346899999999998875
No 151
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=53.88 E-value=2.4 Score=40.70 Aligned_cols=28 Identities=14% Similarity=0.483 Sum_probs=24.4
Q ss_pred cceEEecccccccccccccCCC----CCceee
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPT----QNINWV 233 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~----~~i~w~ 233 (246)
+.+.+|..+|++|+.|.-.||. +.|...
T Consensus 138 ~~i~~d~~kCi~Cg~Cv~~CP~~~~~~ai~~~ 169 (574)
T 3c8y_A 138 KSLTVDRTKCLLCGRCVNACGKNTETYAMKFL 169 (574)
T ss_dssp SSEEEEGGGCCCCCHHHHHHHHHHSCCCSEEE
T ss_pred CcceeCcccCcCCCCccchhCchhcCCceeec
Confidence 6899999999999999999997 666654
No 152
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=53.56 E-value=5.6 Score=40.71 Aligned_cols=25 Identities=24% Similarity=0.482 Sum_probs=13.7
Q ss_pred eEEecccccccccccccCCC-CCceee
Q psy2242 208 LQINAQNCIHCKTCDIKDPT-QNINWV 233 (246)
Q Consensus 208 ~~i~~~nc~~c~~c~i~~p~-~~i~w~ 233 (246)
..++ +.|+.|+.|.-.||+ +.|+++
T Consensus 980 ~~~~-~~C~~Cg~C~~~CP~~~Ai~~~ 1005 (1025)
T 1gte_A 980 PTVT-DTCTGCTLCLSVCPIIDCIRMV 1005 (1025)
T ss_dssp EEEC-TTCCCCCHHHHHCSSTTTEEEE
T ss_pred EEeC-ccCCChhHHHhhCCCCCCEEEe
Confidence 3444 555555555555555 555554
No 153
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=53.55 E-value=11 Score=34.69 Aligned_cols=37 Identities=16% Similarity=0.077 Sum_probs=30.5
Q ss_pred CCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
+++.++||+...-.| .+|+-|+.||+.||+.|.+.+.
T Consensus 419 ~~L~fAG~~t~~~~~---g~v~GAi~SG~~aA~~i~~~l~ 455 (520)
T 1s3e_A 419 DRIYFAGTETATHWS---GYMEGAVEAGERAAREILHAMG 455 (520)
T ss_dssp TTEEECSGGGCSSST---TSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEeehhhcCcCc---EEhHHHHHHHHHHHHHHHHHHh
Confidence 789999998753323 3788899999999999999884
No 154
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=52.95 E-value=5.8 Score=37.83 Aligned_cols=29 Identities=21% Similarity=0.301 Sum_probs=25.3
Q ss_pred cceEEecccccccc--cccccCCCCCceeeC
Q psy2242 206 ERLQINAQNCIHCK--TCDIKDPTQNINWVV 234 (246)
Q Consensus 206 ~~~~i~~~nc~~c~--~c~i~~p~~~i~w~~ 234 (246)
..+.++...|+||+ .|...||++.|....
T Consensus 175 ~~i~~~~~~C~~C~~~~Cv~aCP~gAI~~~~ 205 (512)
T 1q16_B 175 TFMMYLPRLCEHCLNPACVATCPSGAIYKRE 205 (512)
T ss_dssp CCCEEEEECCCCCSSCHHHHTCTTCCEEEET
T ss_pred ceEEecCccCcCCCCchhhhhCCcCcEEeec
Confidence 46788999999999 699999999998753
No 155
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=52.41 E-value=3.5 Score=41.06 Aligned_cols=26 Identities=23% Similarity=0.528 Sum_probs=20.5
Q ss_pred cceEEecccccccccccccC----CCCCce
Q psy2242 206 ERLQINAQNCIHCKTCDIKD----PTQNIN 231 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~----p~~~i~ 231 (246)
+.+.++.++||+|+.|.-.| |...|.
T Consensus 172 p~i~~d~~~CI~C~~Cv~~C~~~~~~~~i~ 201 (783)
T 3i9v_3 172 PFVILDRERCIHCKRCVRYFEEVPGDEVLD 201 (783)
T ss_dssp TTEEECTTTCCCCCHHHHHHHHTTCCCCCE
T ss_pred ccEEEchhhCCCccHHHHHhhhhcCCceee
Confidence 56888999999999998888 555554
No 156
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=51.32 E-value=29 Score=29.88 Aligned_cols=27 Identities=15% Similarity=-0.015 Sum_probs=22.2
Q ss_pred CCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 98 NVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 98 dp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
..+.+.|+.+|...|+++|+.|...++
T Consensus 333 ~G~~g~G~~~a~~~g~~~a~li~~~l~ 359 (363)
T 1c0p_A 333 YGFSSAGYQQSWGAAEDVAQLVDEAFQ 359 (363)
T ss_dssp ECCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcchheeccHHHHHHHHHHHHHH
Confidence 356788999999999999998877664
No 157
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=50.30 E-value=10 Score=33.16 Aligned_cols=28 Identities=25% Similarity=0.466 Sum_probs=23.9
Q ss_pred cceEEecccccccc--cccccCCC-CCceee
Q psy2242 206 ERLQINAQNCIHCK--TCDIKDPT-QNINWV 233 (246)
Q Consensus 206 ~~~~i~~~nc~~c~--~c~i~~p~-~~i~w~ 233 (246)
.+..++...|+||+ .|.-.||+ ..|...
T Consensus 91 ~~~~~~~~~C~~C~~~~C~~~CP~~gAi~~~ 121 (294)
T 1kqf_B 91 LEWLIRKDGCMHCEDPGCLKACPSAGAIIQY 121 (294)
T ss_dssp CEEEEEEESCCCBSSCHHHHHCCSTTSEEEE
T ss_pred eeEEECcccCCCcCChhhhhhCCccCccccc
Confidence 56778999999999 89999999 777654
No 158
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=50.18 E-value=13 Score=33.79 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=28.0
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++. . ..-.+.|+..|+.||+.|..
T Consensus 304 t~~~~IyA~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 304 TSIPDVYAIGDVVDK-G---PMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp CSSTTEEECGGGBSS-S---CSCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeccCCC-C---CccHhHHHHHHHHHHHHHcC
Confidence 345899999999984 1 13457899999999998863
No 159
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=50.03 E-value=13 Score=34.08 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=28.2
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 316 t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 316 TNVSHIWAVGDVTGHI-----QLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp CSSTTEEECGGGGTSC-----CCHHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEEecCCCC-----cCHHHHHHHHHHHHHHHcC
Confidence 4568999999999832 3457899999999998874
No 160
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=49.88 E-value=3.7 Score=34.97 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=19.3
Q ss_pred ceEEecccccccccccccCCCCCc
Q psy2242 207 RLQINAQNCIHCKTCDIKDPTQNI 230 (246)
Q Consensus 207 ~~~i~~~nc~~c~~c~i~~p~~~i 230 (246)
+...+...|++|+.|.-.||...+
T Consensus 150 ~~~~~~~~Ci~CG~C~~~CP~~~~ 173 (252)
T 2h88_B 150 QKLDGLYECILCACCSTSCPSYWW 173 (252)
T ss_dssp HTTTTTTTCCCCCTTGGGCHHHHH
T ss_pred HHhHhHHhchhhCcchhhCCCCcc
Confidence 344577899999999999997653
No 161
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=49.54 E-value=17 Score=33.11 Aligned_cols=38 Identities=18% Similarity=0.055 Sum_probs=31.3
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
.+++.++|++... . . .+|+-|+.||+.||+.|.+.+..
T Consensus 449 ~~~l~fAGe~t~~--~-~-g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 449 QGRIYFAGEYTAQ--A-H-GWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp BTTEEECSGGGSS--S-S-SCHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEEEccccc--C-C-cCHHHHHHHHHHHHHHHHHHhcC
Confidence 4789999999853 1 2 47899999999999999998863
No 162
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=49.29 E-value=14 Score=33.56 Aligned_cols=34 Identities=26% Similarity=0.264 Sum_probs=27.3
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.. .-.+.|+..|+.||+.|.
T Consensus 299 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 332 (464)
T 2a8x_A 299 TNVGHIYAIGDVNGLL-----QLAHVAEAQGVVAAETIA 332 (464)
T ss_dssp CSSTTEEECGGGGCSS-----CSHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeECcCCCc-----cCHHHHHHHHHHHHHHhc
Confidence 3458999999999852 235789999999999885
No 163
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=48.85 E-value=11 Score=38.24 Aligned_cols=37 Identities=24% Similarity=0.285 Sum_probs=31.0
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
...+++.++||+++.. ++..|+..|+.||..|...+.
T Consensus 408 ts~p~IyAaGD~a~~~------~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 408 DAVANQHLAGAMTGRL------DTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp SCCTTEEECGGGGTCC------SHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEecCCch------hHHHHHHHHHHHHHHHHHHcC
Confidence 3468999999999863 466899999999999988774
No 164
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=48.82 E-value=15 Score=33.89 Aligned_cols=35 Identities=17% Similarity=0.105 Sum_probs=28.5
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .-.+.|+..|+.||+.|..
T Consensus 303 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 303 TSVDHIFVAGDANNTL-----TLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp CSSTTEEECGGGGTSS-----CSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 4458999999999853 2357999999999998875
No 165
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=48.82 E-value=16 Score=37.23 Aligned_cols=38 Identities=16% Similarity=0.052 Sum_probs=31.6
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
...+|++++||+++.. .=++.|+..|+.||+.|...|.
T Consensus 471 Ts~~~VfA~GD~~~~~-----~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 471 TSEPWVFAGGDIVGMA-----NTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CSSTTEEECSGGGCSC-----CCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCCc-----hHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999842 2468899999999999998886
No 166
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=48.71 E-value=14 Score=33.55 Aligned_cols=34 Identities=24% Similarity=0.243 Sum_probs=27.2
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|.
T Consensus 296 t~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 329 (463)
T 4dna_A 296 TSTPGIYALGDVTDRV-----QLTPVAIHEAMCFIETEY 329 (463)
T ss_dssp CSSTTEEECSGGGSSC-----CCHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCC-----CChHHHHHHHHHHHHHHc
Confidence 4458999999999832 235789999999999886
No 167
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=48.48 E-value=13 Score=34.20 Aligned_cols=35 Identities=20% Similarity=0.127 Sum_probs=28.1
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++. | .-.+.|+..|+.||+.|..
T Consensus 328 t~~~~IyA~GD~~~~--~---~~~~~A~~~g~~aa~~i~g 362 (491)
T 3urh_A 328 TSIAGVYAIGDVVRG--P---MLAHKAEDEGVAVAEIIAG 362 (491)
T ss_dssp CSSTTEEECGGGSSS--C---CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEecCCC--c---cchhHHHHHHHHHHHHHcC
Confidence 345899999999974 2 4578999999999998763
No 168
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.51 E-value=15 Score=32.46 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=28.8
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||++...++. ..=.+.|+..|+.||+.|.
T Consensus 258 t~~~~IyA~GD~a~~~~~~-~~~~~~A~~qg~~aa~~i~ 295 (367)
T 1xhc_A 258 TSAKDVYAIGDCAEYSGII-AGTAKAAMEQARVLADILK 295 (367)
T ss_dssp CSSTTEEECGGGEEBTTBC-CCSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEeEeeeecCCCC-ccHHHHHHHHHHHHHHHhc
Confidence 4568999999999864432 1235789999999998875
No 169
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=47.37 E-value=16 Score=33.32 Aligned_cols=35 Identities=26% Similarity=0.173 Sum_probs=27.7
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 321 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 355 (478)
T 3dk9_A 321 TNVKGIYAVGDVCGKA-----LLTPVAIAAGRKLAHRLFE 355 (478)
T ss_dssp CSSTTEEECGGGGCSS-----CCHHHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEEecCCCC-----ccHhHHHHHHHHHHHHHcC
Confidence 4458999999999642 3368899999999998763
No 170
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=47.30 E-value=13 Score=34.90 Aligned_cols=41 Identities=15% Similarity=0.103 Sum_probs=32.2
Q ss_pred ccCCEEEeccCccCC---CCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFL---NVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 83 ~~~G~llVGDAAG~v---dp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
.-+|+..+|+++|-+ |=+.+-.+..|+.+|++||+.+.+..
T Consensus 520 ~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~ 563 (566)
T 1qo8_A 520 PIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHA 563 (566)
T ss_dssp EEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHh
Confidence 468999999998755 33455667789999999999987654
No 171
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=45.92 E-value=17 Score=32.95 Aligned_cols=34 Identities=18% Similarity=0.077 Sum_probs=27.3
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
..+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 308 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 308 NVSGVYAIGDVIPGP-----MLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp SSTTEEECSTTSSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeccCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 458999999999842 2357899999999998863
No 172
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=45.27 E-value=5.7 Score=34.86 Aligned_cols=19 Identities=26% Similarity=0.606 Sum_probs=16.4
Q ss_pred ecccccccccccccCCCCC
Q psy2242 211 NAQNCIHCKTCDIKDPTQN 229 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~~ 229 (246)
....||+||.|.-.||.-.
T Consensus 178 ~~~~CI~CG~C~~aCP~~~ 196 (282)
T 3vr8_B 178 GLYECILCACCSASCPSYW 196 (282)
T ss_pred hhhhCcccCcCcccCCcee
Confidence 4567999999999999765
No 173
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=44.78 E-value=11 Score=35.57 Aligned_cols=40 Identities=23% Similarity=0.184 Sum_probs=31.6
Q ss_pred ccCCEEEeccCccCC---CCcccccchhHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFL---NVPKIKGTHNAMKSGMLAAEATYEA 122 (246)
Q Consensus 83 ~~~G~llVGDAAG~v---dp~~~~Gi~~Am~SG~lAAeai~~a 122 (246)
.-+|+..+|.++|-+ |=+.+-.+..||.+|++||+.+.+.
T Consensus 525 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~ 567 (571)
T 1y0p_A 525 VIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKY 567 (571)
T ss_dssp EEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 468999999998855 3345566778899999999998764
No 174
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=44.59 E-value=18 Score=33.36 Aligned_cols=34 Identities=12% Similarity=0.088 Sum_probs=27.7
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|.
T Consensus 316 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~ 349 (490)
T 1fec_A 316 TNVDNIYAIGDVTDRV-----MLTPVAINEGAAFVDTVF 349 (490)
T ss_dssp CSSTTEEECGGGGCSC-----CCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeccCCCc-----cCHHHHHHHHHHHHHHhc
Confidence 4568999999999742 346889999999999886
No 175
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=44.42 E-value=18 Score=32.83 Aligned_cols=35 Identities=26% Similarity=0.132 Sum_probs=28.1
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 315 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 315 SKFPHIKVVGDVTFGP-----MLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeccCCCc-----ccHHHHHHHHHHHHHHHcC
Confidence 3458999999999852 2357999999999998874
No 176
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=44.10 E-value=20 Score=32.61 Aligned_cols=35 Identities=23% Similarity=0.236 Sum_probs=27.9
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 308 t~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~g 342 (476)
T 3lad_A 308 TSVPGVYAIGDVVRGA-----MLAHKASEEGVVVAERIAG 342 (476)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEccCCCc-----ccHHHHHHHHHHHHHHhcC
Confidence 3558999999999642 2468999999999998863
No 177
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=44.00 E-value=19 Score=32.67 Aligned_cols=35 Identities=23% Similarity=0.241 Sum_probs=27.9
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .=.+.|+..|+.||+.+..
T Consensus 293 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 327 (450)
T 1ges_A 293 TNIEGIYAVGDNTGAV-----ELTPVAVAAGRRLSERLFN 327 (450)
T ss_dssp CSSTTEEECSGGGTSC-----CCHHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeccCCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 4568999999999742 2367899999999998863
No 178
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=43.76 E-value=27 Score=31.42 Aligned_cols=44 Identities=14% Similarity=0.045 Sum_probs=32.5
Q ss_pred cccCCEEEeccCccCCCCc-------ccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 82 LTFPGGCLVGCTAGFLNVP-------KIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~-------~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
...+++..+||+|.+-+.- ..+=-+.|++.|..+|+.|.+.++.
T Consensus 284 t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g 334 (430)
T 3hyw_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcC
Confidence 3458999999999875321 1111258999999999999998863
No 179
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=43.64 E-value=19 Score=32.90 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=27.3
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++. | .=.+.|+..|+.||+.+.
T Consensus 312 t~~~~IyA~GD~~~~--~---~~~~~A~~~g~~aa~~i~ 345 (479)
T 2hqm_A 312 TNVPNIYSLGDVVGK--V---ELTPVAIAAGRKLSNRLF 345 (479)
T ss_dssp CSSTTEEECGGGTTS--S---CCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEecCCC--c---ccHHHHHHHHHHHHHHhc
Confidence 356899999999874 2 236789999999999876
No 180
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=43.64 E-value=1.3e+02 Score=26.21 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=26.1
Q ss_pred CCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
+++.++|.+-...-+-+ |+=|+.||..||+.|..
T Consensus 391 g~~~fAGe~t~~~~~g~---~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 391 GRIHFVGSDVSLEFPGY---IEGALETAECAVNAILH 424 (431)
T ss_dssp TTEEECSGGGCSSSTTS---HHHHHHHHHHHHHHHHH
T ss_pred CcEEEEehhhhccCCeE---ehHHHHHHHHHHHHHHh
Confidence 48999996666544555 44599999999998875
No 181
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=43.38 E-value=5.4 Score=33.40 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=20.3
Q ss_pred cceEEecccccccccccccCCCCCc
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNI 230 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i 230 (246)
..+..+...|++|+.|.-.||...+
T Consensus 140 ~~~~~~~~~Ci~Cg~C~~~CP~~~~ 164 (238)
T 2wdq_B 140 REKLDGLYECILCACCSTSCPSFWW 164 (238)
T ss_dssp HHTTTTTTTCCCCCTTGGGCHHHHH
T ss_pred HHHHhccccccccCCchhhCcCCcc
Confidence 3455678999999999999997654
No 182
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=43.36 E-value=21 Score=32.38 Aligned_cols=35 Identities=17% Similarity=-0.052 Sum_probs=28.0
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.- .-.+.|+..|+.||+.+..
T Consensus 299 t~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 333 (467)
T 1zk7_A 299 TSNPNIYAAGDCTDQP-----QFVYVAAAAGTRAAINMTG 333 (467)
T ss_dssp CSSTTEEECSTTBSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHHcC
Confidence 4568999999999853 2368899999999998753
No 183
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=43.03 E-value=19 Score=34.39 Aligned_cols=44 Identities=25% Similarity=0.130 Sum_probs=34.5
Q ss_pred ccccCCEEEeccCcc-CC---CCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAG-FL---NVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 81 kl~~~G~llVGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
+..-+|+..+|++|+ .+ |-+-+..+.-|+..|++||+.|.+.+.
T Consensus 369 ~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~~ 416 (602)
T 1kf6_A 369 ETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERAA 416 (602)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhhh
Confidence 456799999999984 34 445556678899999999999887764
No 184
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=42.64 E-value=20 Score=34.81 Aligned_cols=44 Identities=23% Similarity=0.132 Sum_probs=35.2
Q ss_pred ccccCCEEEeccCcc-CC---CCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAG-FL---NVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 81 kl~~~G~llVGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
+..-+|+..+|++|+ -+ |.+-+..+.-|+..|++||+.|.+.+.
T Consensus 382 ~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 429 (660)
T 2bs2_A 382 EAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHCA 429 (660)
T ss_dssp BCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 446799999999873 33 566677788899999999999887764
No 185
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=42.23 E-value=20 Score=33.05 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=27.4
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|.
T Consensus 320 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~ 353 (495)
T 2wpf_A 320 TNVPNIYAIGDITDRL-----MLTPVAINEGAALVDTVF 353 (495)
T ss_dssp CSSTTEEECGGGGCSC-----CCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeccCCCc-----cCHHHHHHHHHHHHHHhc
Confidence 4568999999999742 235789999999999886
No 186
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=42.22 E-value=20 Score=33.86 Aligned_cols=40 Identities=15% Similarity=0.117 Sum_probs=31.3
Q ss_pred ccCCEEEeccCccCC---CCcccccchhHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFL---NVPKIKGTHNAMKSGMLAAEATYEA 122 (246)
Q Consensus 83 ~~~G~llVGDAAG~v---dp~~~~Gi~~Am~SG~lAAeai~~a 122 (246)
.-+|+..+|.++|-+ |=+-+..+.-||.+|++||+.+.+.
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~ 568 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKF 568 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHH
Confidence 458999999998755 3345566788999999999998653
No 187
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=42.21 E-value=19 Score=32.86 Aligned_cols=35 Identities=26% Similarity=0.241 Sum_probs=27.9
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 314 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 314 TNVPHIYAIGDIVGQP-----MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp CSSTTEEECGGGTCSS-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEEEcccCCC-----ccHHHHHHHHHHHHHHHcC
Confidence 3458999999999842 2357899999999998863
No 188
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=41.90 E-value=19 Score=33.92 Aligned_cols=44 Identities=20% Similarity=0.203 Sum_probs=35.1
Q ss_pred ccccCCEEEeccCc--cC--CCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTA--GF--LNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 81 kl~~~G~llVGDAA--G~--vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
+..-+|+..+|++| |+ -|.+-+..+.-|+..|++||+.+.+.+.
T Consensus 364 ~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 364 RTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 34579999999998 33 2677777888999999999999877653
No 189
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=41.73 E-value=20 Score=32.58 Aligned_cols=34 Identities=32% Similarity=0.404 Sum_probs=27.2
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.. .=.+.|+..|+.||+.+.
T Consensus 299 t~~~~Iya~GD~~~~~-----~l~~~A~~~g~~aa~~i~ 332 (464)
T 2eq6_A 299 TSVPGVYAIGDAARPP-----LLAHKAMREGLIAAENAA 332 (464)
T ss_dssp CSSTTEEECGGGTCSS-----CCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHhc
Confidence 3458999999999852 235789999999999886
No 190
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=41.57 E-value=18 Score=32.72 Aligned_cols=40 Identities=15% Similarity=0.079 Sum_probs=32.7
Q ss_pred ccCCEEEeccCccCCCC-cccccchhHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNV-PKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp-~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
.-+|+.++|..++ ++. +-+-.+.-|+.||++|++.+.+..
T Consensus 403 ~i~GLy~aGEv~~-v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 403 FTNGLYFCGEVLD-IHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSBTEEECGGGBS-CBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeecc-CccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 4689999999999 654 455567889999999999987654
No 191
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=41.35 E-value=21 Score=32.29 Aligned_cols=33 Identities=27% Similarity=0.171 Sum_probs=26.7
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||+++.. .=.+.|+..|+.||+.|.
T Consensus 299 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 331 (455)
T 1ebd_A 299 SVPNIFAIGDIVPGP-----ALAHKASYEGKVAAEAIA 331 (455)
T ss_dssp SSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHHc
Confidence 458999999999842 235789999999999886
No 192
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=41.20 E-value=24 Score=32.21 Aligned_cols=34 Identities=26% Similarity=0.160 Sum_probs=26.8
Q ss_pred cccCCEEEeccCc-cCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTA-GFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAA-G~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||++ |. | .=.+.|+..|+.||+.|.
T Consensus 316 t~~~~IyA~GD~~~~~--~---~~~~~A~~~g~~aa~~i~ 350 (483)
T 3dgh_A 316 TNVANIYAVGDIIYGK--P---ELTPVAVLAGRLLARRLY 350 (483)
T ss_dssp CSSTTEEECSTTBTTS--C---CCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcccCCC--C---ccHHHHHHHHHHHHHHHc
Confidence 4568999999998 42 2 346889999999999875
No 193
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=40.89 E-value=21 Score=32.42 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=27.8
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 310 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 344 (474)
T 1zmd_A 310 TKIPNIYAIGDVVAGP-----MLAHKAEDEGIICVEGMAG 344 (474)
T ss_dssp CSSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeecCCCC-----ccHHHHHHHHHHHHHHhcC
Confidence 3458999999999842 2357899999999998863
No 194
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=40.17 E-value=23 Score=32.27 Aligned_cols=33 Identities=27% Similarity=0.274 Sum_probs=26.7
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||+++.. .=.+.|+..|+.||+.+.
T Consensus 293 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 325 (463)
T 2r9z_A 293 NVPGVYALGDITGRD-----QLTPVAIAAGRRLAERLF 325 (463)
T ss_dssp SSTTEEECGGGGTSC-----CCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCCc-----ccHHHHHHHHHHHHHHHc
Confidence 458999999999742 236789999999999875
No 195
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=39.42 E-value=25 Score=32.17 Aligned_cols=35 Identities=26% Similarity=0.215 Sum_probs=26.6
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
..-+++.++||++.-- | .=.+.|+..|++||+.|.
T Consensus 316 t~~~~IyA~GD~~~~~-~---~~~~~A~~~g~~aa~~i~ 350 (488)
T 3dgz_A 316 TSVPHIYAIGDVAEGR-P---ELTPTAIKAGKLLAQRLF 350 (488)
T ss_dssp CSSTTEEECGGGBTTC-C---CCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeEEecCCC-C---cchhHHHHHHHHHHHHHc
Confidence 4568999999998411 1 235789999999999876
No 196
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=39.42 E-value=19 Score=33.03 Aligned_cols=39 Identities=18% Similarity=0.230 Sum_probs=31.9
Q ss_pred cCCEEEeccCccCCCCccccc-chhHHHHHHHHHHHHHHHHHhCC
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKG-THNAMKSGMLAAEATYEALAEAG 127 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~G-i~~Am~SG~lAAeai~~al~~gd 127 (246)
.+|+.++||++.. | .| +..|+..|..||+.|...+..+.
T Consensus 359 ~p~vya~Gd~~~g--~---~~~i~~a~~~g~~aa~~i~~~l~~~~ 398 (460)
T 1cjc_A 359 VPGLYCSGWVKRG--P---TGVITTTMTDSFLTGQILLQDLKAGH 398 (460)
T ss_dssp CTTEEECTHHHHC--T---TCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEeCCcC--C---CccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 4899999999953 2 34 67899999999999999987654
No 197
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=38.68 E-value=4.5 Score=34.01 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=19.5
Q ss_pred eEEecccccccccccccCCCCCc
Q psy2242 208 LQINAQNCIHCKTCDIKDPTQNI 230 (246)
Q Consensus 208 ~~i~~~nc~~c~~c~i~~p~~~i 230 (246)
+..+...|++|+.|.-.||...+
T Consensus 141 ~~~~~~~Ci~Cg~C~~~CP~~~~ 163 (243)
T 1kf6_B 141 KYHQFSGCINCGLCYAACPQFGL 163 (243)
T ss_dssp TTGGGGCCCCCCHHHHHCHHHHH
T ss_pred HhhhhhhccccCccccccCCCcc
Confidence 44788999999999999997654
No 198
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=38.49 E-value=21 Score=32.23 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=29.9
Q ss_pred ccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 81 kl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
.+..+|+.++|.-+.+= .....++.||.||+.||+.|+.
T Consensus 439 ~l~~~~l~~~GR~g~~~--Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 439 KLQDKDIWSRGRFGSWR--YEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp HHHHTTEEECSTTTTCC--GGGCSHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCcEEecCCcccC--cCCCCHHHHHHHHHHHHHHHHc
Confidence 35568999999876652 1224688999999999999875
No 199
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=38.31 E-value=25 Score=32.66 Aligned_cols=34 Identities=29% Similarity=0.213 Sum_probs=27.5
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|.
T Consensus 343 t~~~~IyA~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 376 (523)
T 1mo9_A 343 TSVPNVYAVGDLIGGP-----MEMFKARKSGCYAARNVM 376 (523)
T ss_dssp CSSTTEEECGGGGCSS-----CSHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeecCCCc-----ccHHHHHHHHHHHHHHHc
Confidence 4568999999999853 235789999999999885
No 200
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=37.82 E-value=4.1 Score=34.23 Aligned_cols=23 Identities=22% Similarity=0.418 Sum_probs=19.5
Q ss_pred eEEecccccccccccccCCCCCc
Q psy2242 208 LQINAQNCIHCKTCDIKDPTQNI 230 (246)
Q Consensus 208 ~~i~~~nc~~c~~c~i~~p~~~i 230 (246)
...+...|++|+.|.-.||+..+
T Consensus 144 ~~~~~~~Ci~Cg~C~~~CP~~~~ 166 (241)
T 2bs2_B 144 EVFELDRCIECGCCIAACGTKIM 166 (241)
T ss_dssp HHHHHHTCCCCCHHHHTCHHHHH
T ss_pred HhhhhhhhhccCcCcccCCCCcc
Confidence 34567899999999999998865
No 201
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=37.47 E-value=26 Score=33.73 Aligned_cols=37 Identities=19% Similarity=0.114 Sum_probs=30.0
Q ss_pred CCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
+++.++|++...-.+ .-||-|+.||+.||+.|.+.+.
T Consensus 623 grl~FAGe~ts~~~~---g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 623 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeccccCCCC---cCHHHHHHHHHHHHHHHHHHcc
Confidence 689999999875433 3467799999999999998773
No 202
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=37.04 E-value=27 Score=32.08 Aligned_cols=34 Identities=21% Similarity=0.120 Sum_probs=27.3
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||+++.. .=.+.|+..|+.||+.|.
T Consensus 307 t~~~~IyA~GD~~~~~-----~l~~~A~~~g~~aa~~i~ 340 (499)
T 1xdi_A 307 TLATGIYAAGDCTGLL-----PLASVAAMQGRIAMYHAL 340 (499)
T ss_dssp CSSTTEEECSGGGTSC-----SCHHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEeccCCCc-----ccHHHHHHHHHHHHHHhc
Confidence 3468999999999853 235789999999999886
No 203
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=36.90 E-value=29 Score=32.22 Aligned_cols=34 Identities=24% Similarity=0.222 Sum_probs=26.8
Q ss_pred cccCCEEEeccCc-cCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTA-GFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAA-G~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||++ +. .+=.+.|+..|+.||+.|+
T Consensus 344 Ts~~~IyA~GD~~~g~-----~~~~~~A~~~g~~aa~~i~ 378 (519)
T 3qfa_A 344 TNVPYIYAIGDILEDK-----VELTPVAIQAGRLLAQRLY 378 (519)
T ss_dssp CSSTTEEECGGGBSSS-----CCCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEeccCCC-----CccHHHHHHHHHHHHHHHc
Confidence 4458999999998 42 2346889999999999876
No 204
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=35.94 E-value=7.2 Score=32.59 Aligned_cols=19 Identities=16% Similarity=0.202 Sum_probs=16.5
Q ss_pred ecccccccccccccCCCCC
Q psy2242 211 NAQNCIHCKTCDIKDPTQN 229 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~~ 229 (246)
+..+|+.|+.|...||...
T Consensus 202 ~~~~C~~Cg~C~~vCP~gi 220 (238)
T 2wdq_B 202 SVFRCHSIMNCVSVCPKGL 220 (238)
T ss_dssp TTTTCCCCCHHHHHCTTCC
T ss_pred CCCcCcccchhhhhcCCCC
Confidence 5678999999999999753
No 205
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=35.07 E-value=30 Score=32.19 Aligned_cols=37 Identities=14% Similarity=-0.118 Sum_probs=29.6
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEA 122 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~a 122 (246)
..|+++++||+|..-.|.+. ..|++.|..+|+.|...
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a---~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTA---QVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSCCCH---HHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCCCch---HHHHHHHHHHHHHHHHH
Confidence 46899999999987555554 57999999999988653
No 206
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=34.86 E-value=29 Score=30.50 Aligned_cols=38 Identities=11% Similarity=-0.100 Sum_probs=26.9
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
...+++.++||++++-.+.. .=++.|+..|+.||+.+.
T Consensus 267 t~~~~IyA~GD~~~~~~~~~-~~~~~a~~~g~~~a~~i~ 304 (384)
T 2v3a_A 267 TSHANIYALGDCAEVDGLNL-LYVMPLMACARALAQTLA 304 (384)
T ss_dssp CSSTTEEECGGGEEETTBCC-CSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEeeeeeeECCCCc-chHHHHHHHHHHHHHHhc
Confidence 34689999999997533221 124668889998888775
No 207
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=34.03 E-value=7.9 Score=32.44 Aligned_cols=18 Identities=17% Similarity=0.368 Sum_probs=16.1
Q ss_pred ecccccccccccccCCCC
Q psy2242 211 NAQNCIHCKTCDIKDPTQ 228 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~ 228 (246)
+...|+.|+.|...||..
T Consensus 200 ~~~~C~~Cg~C~~vCP~g 217 (243)
T 1kf6_B 200 GVWSCTFVGYCSEVCPKH 217 (243)
T ss_dssp TGGGCCCCCHHHHHCTTC
T ss_pred CcccCcccCCcchhCCCC
Confidence 567899999999999975
No 208
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=34.02 E-value=25 Score=34.97 Aligned_cols=36 Identities=14% Similarity=-0.044 Sum_probs=28.9
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
..+++.++|++....-+-+ |+-|+.||..||+.|++
T Consensus 740 ~~grL~FAGE~Ts~~~~gt---veGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 740 IQGTVFFAGEATNRHFPQT---VTGAYLSGVREASKIAA 775 (776)
T ss_dssp BTTTEEECSGGGCSSSCSS---HHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEehhhcCCCCcC---HHHHHHHHHHHHHHHHh
Confidence 3578999999987654533 77799999999998864
No 209
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=33.88 E-value=13 Score=34.30 Aligned_cols=41 Identities=10% Similarity=-0.040 Sum_probs=31.1
Q ss_pred ccccCCEEEeccCcc-CC---CCcccccchhHHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAG-FL---NVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 81 kl~~~G~llVGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
+..-+|+..+||+|+ -+ |++.+..+.-|+..|+.||+.+.+
T Consensus 326 ~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~ 370 (472)
T 2e5v_A 326 ESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDS 370 (472)
T ss_dssp BCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTS
T ss_pred ccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHh
Confidence 456799999999998 44 466666677777888888877653
No 210
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=33.15 E-value=16 Score=31.00 Aligned_cols=45 Identities=20% Similarity=0.145 Sum_probs=32.7
Q ss_pred ccCCEEEeccCccCC--CCcccccchhHHHHHHHHHHHHHHHHHhCC
Q psy2242 83 TFPGGCLVGCTAGFL--NVPKIKGTHNAMKSGMLAAEATYEALAEAG 127 (246)
Q Consensus 83 ~~~G~llVGDAAG~v--dp~~~~Gi~~Am~SG~lAAeai~~al~~gd 127 (246)
..|++..+||++..+ +|.-+-=...|+.||..||+.|.+.|++..
T Consensus 232 ~~p~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~~~ 278 (284)
T 1rp0_A 232 VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPN 278 (284)
T ss_dssp EETTEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccCCEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhhhh
Confidence 458999999998654 232222245688999999999999886544
No 211
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.72 E-value=34 Score=31.02 Aligned_cols=33 Identities=27% Similarity=0.241 Sum_probs=26.7
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||+++.. .=.+.|+..|+.||+.+.
T Consensus 296 ~~~~Iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~ 328 (458)
T 1lvl_A 296 SMHNVWAIGDVAGEP-----MLAHRAMAQGEMVAEIIA 328 (458)
T ss_dssp SSTTEEECGGGGCSS-----CCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeeccCCCc-----ccHHHHHHHHHHHHHHhc
Confidence 458999999999842 235789999999999886
No 212
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=31.66 E-value=40 Score=30.37 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=27.1
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
..+++.++||+++.. .=.+.|+..|+.||+.|..
T Consensus 293 ~~~~iya~GD~~~~~-----~~~~~A~~~g~~aa~~i~~ 326 (455)
T 2yqu_A 293 RVPHIYAIGDVVRGP-----MLAHKASEEGIAAVEHMVR 326 (455)
T ss_dssp SSTTEEECGGGSSSC-----CCHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCCc-----cCHHHHHHhHHHHHHHHcC
Confidence 358999999999852 2357899999999998864
No 213
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=31.62 E-value=35 Score=31.33 Aligned_cols=38 Identities=18% Similarity=0.141 Sum_probs=26.7
Q ss_pred ccCCEEEeccCccCCCC-----------------------------cccccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNV-----------------------------PKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp-----------------------------~~~~Gi~~Am~SG~lAAeai~ 120 (246)
..+++.++||++.+.++ -...=.+.|+..|+.||+.+.
T Consensus 303 ~~~~iya~GD~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 369 (500)
T 1onf_A 303 SVNNIYAVGDCCMVKKSKEIEDLNLLKLYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLF 369 (500)
T ss_dssp SSSSEEECSTTEEEC------------------------------CBCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeccccccccccccccccccccccccccccccccccccCCcccchhHHHHHHHHHHHHHh
Confidence 36899999999943211 112235789999999999886
No 214
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=31.50 E-value=27 Score=31.97 Aligned_cols=39 Identities=15% Similarity=0.072 Sum_probs=30.4
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
.+|+.++||++.- |. .-+..|+..|..||+.|...+..+
T Consensus 351 ~pgvya~GD~~~g--p~--~~i~~a~~~g~~~a~~i~~~l~~~ 389 (456)
T 1lqt_A 351 SPNEYVVGWIKRG--PT--GVIGTNKKDAQDTVDTLIKNLGNA 389 (456)
T ss_dssp CSSEEECTHHHHC--SC--SCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeccCCC--Cc--hhHHHHHHHHHHHHHHHHHHHHhC
Confidence 4899999999852 21 135689999999999999888653
No 215
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=30.63 E-value=40 Score=31.71 Aligned_cols=36 Identities=17% Similarity=0.092 Sum_probs=27.1
Q ss_pred cccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 82 LTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 82 l~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
...+++.++||++.- . ..-++.|+..|+.||+.|..
T Consensus 423 ts~~~VyA~GD~~~~-~---~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 423 TTVSNVYAIGDINAG-K---PQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp CSSTTEEECGGGBTT-S---CCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeeecCC-C---CccHHHHHHhHHHHHHHHhc
Confidence 456899999999531 1 23468899999999998864
No 216
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=30.63 E-value=9.9 Score=32.22 Aligned_cols=18 Identities=17% Similarity=0.335 Sum_probs=15.8
Q ss_pred ecccccccccccccCCCC
Q psy2242 211 NAQNCIHCKTCDIKDPTQ 228 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~ 228 (246)
...+|+.|+.|...||..
T Consensus 211 ~~~~C~~Cg~C~~~CP~~ 228 (252)
T 2h88_B 211 SLYRCHTIMNCTRTCPKG 228 (252)
T ss_dssp TTTTCCCCCHHHHHCTTC
T ss_pred CCCcCccccchhhhcCCC
Confidence 457899999999999965
No 217
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=30.02 E-value=15 Score=35.38 Aligned_cols=25 Identities=28% Similarity=0.490 Sum_probs=21.6
Q ss_pred cceEEecccccccccccccCCCCCc
Q psy2242 206 ERLQINAQNCIHCKTCDIKDPTQNI 230 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~c~i~~p~~~i 230 (246)
++-.|+-+.|+-||.|--|||...|
T Consensus 60 ~~~~i~e~~c~gc~~~~~~~p~~~i 84 (607)
T 3bk7_A 60 YKPIIQEASCTGCGICVHKCPFNAI 84 (607)
T ss_dssp TEEEECTTTCCCCCHHHHHCSSCCC
T ss_pred CcceeeecccCccccccCCCCcceE
Confidence 5788999999999999999998543
No 218
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=29.49 E-value=77 Score=27.17 Aligned_cols=37 Identities=16% Similarity=0.067 Sum_probs=25.7
Q ss_pred CCEEEeccCc---cCC--CCcccccchhHHHHHHHHHHHHHH
Q psy2242 85 PGGCLVGCTA---GFL--NVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 85 ~G~llVGDAA---G~v--dp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
|+.-+||... +++ ..+.+.|+.+|..+|++.|+.|..
T Consensus 313 d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 313 DSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp TSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 5556677654 222 456778999999888888887653
No 219
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=29.36 E-value=40 Score=33.30 Aligned_cols=41 Identities=10% Similarity=-0.105 Sum_probs=32.9
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhCCC
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEAGD 128 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~gd~ 128 (246)
..++.++||+... .+-..+| |++||.-|+..|...+..++.
T Consensus 644 ~gri~fAGe~~S~-~~GWieG---Al~Sa~~Aa~~i~~~~~~~~~ 684 (721)
T 3ayj_A 644 DNRFFIASDSYSH-LGGWLEG---AFMSALNAVAGLIVRANRGDV 684 (721)
T ss_dssp CCCEEECSGGGSS-CTTSHHH---HHHHHHHHHHHHHHHHTTTCG
T ss_pred CCCEEEeehhhcc-CCceehH---HHHHHHHHHHHHHHHhcCCCC
Confidence 3689999999974 3555555 999999999999998865553
No 220
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=29.03 E-value=45 Score=32.35 Aligned_cols=43 Identities=9% Similarity=-0.017 Sum_probs=32.6
Q ss_pred ccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHhC
Q psy2242 81 RLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAEA 126 (246)
Q Consensus 81 kl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~g 126 (246)
+..-+|++.+||+|+.- +.+- ..+++..|++||..+.+.++..
T Consensus 449 ~t~v~gl~a~Ge~~~~~--~hg~-~~~sl~~g~~ag~~a~~~~~~~ 491 (662)
T 3gyx_A 449 MTTVEGLWTCADGVGAS--GHKF-SSGSHAEGRIVGKQMVRWYLDH 491 (662)
T ss_dssp BCSSBTEECCSSSBCSC--CCCH-HHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccCCeEeCccccccc--cCcc-HhHHHHHHHHHHHHHHHHHhhC
Confidence 46678999999999731 1211 5678889999999999888754
No 221
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=28.86 E-value=15 Score=31.54 Aligned_cols=24 Identities=21% Similarity=0.283 Sum_probs=18.9
Q ss_pred eEEecccccccccccccCCCCCcee
Q psy2242 208 LQINAQNCIHCKTCDIKDPTQNINW 232 (246)
Q Consensus 208 ~~i~~~nc~~c~~c~i~~p~~~i~w 232 (246)
..+|..+|+.|+.|.-.|| ..|..
T Consensus 196 v~~d~~~C~~C~~C~~vCp-~aI~~ 219 (265)
T 2pa8_D 196 SVKNELSCTLCEECLRYCN-GSIRI 219 (265)
T ss_dssp EESCGGGCCCCCHHHHHHT-TSEEE
T ss_pred EEeccccCCCchHHHHhCC-CceEE
Confidence 4567789999999998899 66643
No 222
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=27.98 E-value=34 Score=32.97 Aligned_cols=42 Identities=19% Similarity=0.096 Sum_probs=33.1
Q ss_pred ccCCEEEeccCcc-CC---CCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAG-FL---NVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 83 ~~~G~llVGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
.-+|+..+|++|+ -+ |-+-+..+.-|+..|++||+.|.+.+.
T Consensus 388 ~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 433 (621)
T 2h88_A 388 VVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCK 433 (621)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred ccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence 4689999999874 34 445666788899999999999887653
No 223
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=27.57 E-value=35 Score=31.47 Aligned_cols=38 Identities=13% Similarity=0.020 Sum_probs=28.8
Q ss_pred ccCCEEEeccCccCC---CCcccccchhHHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFL---NVPKIKGTHNAMKSGMLAAEATY 120 (246)
Q Consensus 83 ~~~G~llVGDAAG~v---dp~~~~Gi~~Am~SG~lAAeai~ 120 (246)
.-+|+..+|.++|-+ |=+.+-.+..||.+|++||+.+.
T Consensus 467 ~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa 507 (510)
T 4at0_A 467 PIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAA 507 (510)
T ss_dssp EEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred CcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHH
Confidence 357899999987644 32345567789999999999875
No 224
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=27.51 E-value=18 Score=31.70 Aligned_cols=18 Identities=22% Similarity=0.440 Sum_probs=15.3
Q ss_pred ecccccccccccccCCCC
Q psy2242 211 NAQNCIHCKTCDIKDPTQ 228 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~ 228 (246)
.-.+|.+|+.|...||..
T Consensus 235 ~l~~C~~Cg~C~~vCP~g 252 (282)
T 3vr8_B 235 SAFKCHTIMNCTKTCPKH 252 (282)
T ss_pred CcccChhhCCccccCcCC
Confidence 357899999999999953
No 225
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=26.95 E-value=30 Score=33.42 Aligned_cols=35 Identities=23% Similarity=0.015 Sum_probs=28.3
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALA 124 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~ 124 (246)
.+++.++||+++. .-+..|+..|..||..|...|.
T Consensus 641 ~~~VyaiGD~~~~------~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 641 IASVRGIGDAWAP------GTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp CSEEEECGGGTSC------BCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEeCCCch------hhHHHHHHHHHHHHHHHHhhcc
Confidence 4899999999972 3456699999999999877653
No 226
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=26.92 E-value=12 Score=31.21 Aligned_cols=18 Identities=17% Similarity=0.383 Sum_probs=16.0
Q ss_pred ecccccccccccccCCCC
Q psy2242 211 NAQNCIHCKTCDIKDPTQ 228 (246)
Q Consensus 211 ~~~nc~~c~~c~i~~p~~ 228 (246)
...+|+.|+.|.-.||.+
T Consensus 204 ~~~~C~~Cg~C~~vCP~~ 221 (241)
T 2bs2_B 204 GVFGCMTLLACHDVCPKN 221 (241)
T ss_dssp TGGGCCCCCHHHHHCTTC
T ss_pred CcccCcccChhhHhcCCC
Confidence 567999999999999965
No 227
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=26.40 E-value=38 Score=32.19 Aligned_cols=43 Identities=26% Similarity=0.135 Sum_probs=32.2
Q ss_pred ccCCEEEeccCcc-CC---CCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 83 TFPGGCLVGCTAG-FL---NVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 83 ~~~G~llVGDAAG-~v---dp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
.-+|+..+|++|+ -+ |=+-+..+.-|+..|++||+.|.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~~~ 425 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESIAE 425 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhc
Confidence 5689999999873 33 3344555777999999999998876643
No 228
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=26.28 E-value=18 Score=35.79 Aligned_cols=21 Identities=5% Similarity=-0.209 Sum_probs=18.8
Q ss_pred cccccccccccCCCCCceeeC
Q psy2242 214 NCIHCKTCDIKDPTQNINWVV 234 (246)
Q Consensus 214 nc~~c~~c~i~~p~~~i~w~~ 234 (246)
+|+.|+.|.-.||+..|+-+.
T Consensus 219 ~C~~CG~Cv~vCP~gAl~~~~ 239 (783)
T 3i9v_3 219 PSGFSGNITDICPVGALLDLT 239 (783)
T ss_dssp CSTTTTTHHHHCSSSSEEEGG
T ss_pred CCccchhHHhhcccCceeccc
Confidence 799999999999999987554
No 229
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=25.99 E-value=30 Score=33.76 Aligned_cols=34 Identities=24% Similarity=0.165 Sum_probs=26.9
Q ss_pred cCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEAL 123 (246)
Q Consensus 84 ~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al 123 (246)
.+++.++||+++ | .-+..|+..|+.||..|...+
T Consensus 666 ~~~VyAiGD~~~---~---~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 666 IKGIYLIGDAEA---P---RLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp CCEEEECGGGTS---C---CCHHHHHHHHHHHHHTTTSSC
T ss_pred CCCeEEEeCccc---h---hhHHHHHHHHHHHHHHhhhhc
Confidence 379999999997 3 235679999999999886543
No 230
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=25.91 E-value=55 Score=32.89 Aligned_cols=38 Identities=18% Similarity=0.104 Sum_probs=31.0
Q ss_pred CCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHHHHHh
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYEALAE 125 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~al~~ 125 (246)
+++.++|++...--+ .-||-|+.||..||+.|.+.+..
T Consensus 794 grL~FAGE~Ts~~~~---gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 794 PRLFFAGEHTIRNYP---ATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CCEEECSGGGCTTST---TSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcEEEEehhHhCCCC---cCHHHHHHHHHHHHHHHHHHhhC
Confidence 689999999775333 35777999999999999999864
No 231
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=23.15 E-value=13 Score=37.37 Aligned_cols=22 Identities=18% Similarity=0.427 Sum_probs=18.3
Q ss_pred EEecccccccccccccCCCCCc
Q psy2242 209 QINAQNCIHCKTCDIKDPTQNI 230 (246)
Q Consensus 209 ~i~~~nc~~c~~c~i~~p~~~i 230 (246)
..+...|+.|+.|...||...+
T Consensus 449 ~~~~~~Ci~Cg~C~~vCP~ga~ 470 (807)
T 3cf4_A 449 EEIHDTCIGCRRCEQVCKKEIP 470 (807)
T ss_dssp HHHHHHCCCCCHHHHHCTTCCC
T ss_pred hhchhhccchhhHHHhCCCCCC
Confidence 3456889999999999998764
No 232
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=22.70 E-value=1.5e+02 Score=25.27 Aligned_cols=38 Identities=5% Similarity=0.009 Sum_probs=26.0
Q ss_pred cCCEEEeccCc---cCC--CCcccccchhHHHHHHHHHHHHHH
Q psy2242 84 FPGGCLVGCTA---GFL--NVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 84 ~~G~llVGDAA---G~v--dp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
.|+..+||... +++ ..+.+.|+.+|...|++.|+.|..
T Consensus 321 ~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i~~ 363 (389)
T 2gf3_A 321 LDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALT 363 (389)
T ss_dssp TTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHHHHH
T ss_pred CCCCeEEccCCCCCCEEEEECCccccccccHHHHHHHHHHHcC
Confidence 35666777643 222 345678999999988888887653
No 233
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=22.34 E-value=54 Score=31.43 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=25.4
Q ss_pred ccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHH
Q psy2242 83 TFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEAT 119 (246)
Q Consensus 83 ~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai 119 (246)
.++++.+|||++..-++ =+..|+..|..||..|
T Consensus 639 ~g~~v~aiGD~~~~~~~----~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 639 SGKTVHLIGGCDVAMEL----DARRAIAQGTRLALEI 671 (671)
T ss_dssp TTCCEEECGGGTCCSSC----CHHHHHHHHHHHHHHC
T ss_pred cCCCEEEECCcCccCch----hHHHHHHHHHHHHHhC
Confidence 35789999999886432 2788999999998753
No 234
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=22.14 E-value=2.2e+02 Score=24.01 Aligned_cols=29 Identities=17% Similarity=-0.088 Sum_probs=25.3
Q ss_pred CcccccchhHHHHHHHHHHHHHHHHHhCC
Q psy2242 99 VPKIKGTHNAMKSGMLAAEATYEALAEAG 127 (246)
Q Consensus 99 p~~~~Gi~~Am~SG~lAAeai~~al~~gd 127 (246)
.+.+.|+.+|...|++.|+.|.+++++.+
T Consensus 310 G~~g~G~~~ap~~g~~la~li~~~~~~~~ 338 (351)
T 3g3e_A 310 GHGGYGLTIHWGCALEAAKLFGRILEEKK 338 (351)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCcchHhhhHHHHHHHHHHHHHHHHhcc
Confidence 46788999999999999999999987644
No 235
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=22.09 E-value=13 Score=33.54 Aligned_cols=27 Identities=15% Similarity=0.037 Sum_probs=22.5
Q ss_pred ceEEecccc-ccc--ccccccCCCCCceee
Q psy2242 207 RLQINAQNC-IHC--KTCDIKDPTQNINWV 233 (246)
Q Consensus 207 ~~~i~~~nc-~~c--~~c~i~~p~~~i~w~ 233 (246)
..+||.+.| ..| +.|.-.||++.|+|.
T Consensus 199 ~p~id~~~c~~~Ce~~~Cv~~CP~~AI~~~ 228 (366)
T 3mm5_B 199 PPIPNDEAIRKTCEIPSTVAACPTGALKPD 228 (366)
T ss_dssp CCCCCHHHHHHHCCHHHHHHTCTTCCEEEE
T ss_pred ceEEcchhccccccccchhccCCccceEec
Confidence 566788877 355 999999999999997
No 236
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=22.04 E-value=80 Score=29.75 Aligned_cols=37 Identities=22% Similarity=0.195 Sum_probs=27.9
Q ss_pred ccccCCEEEeccCccCCCCcccccchhHHHHHHHHHHHHHH
Q psy2242 81 RLTFPGGCLVGCTAGFLNVPKIKGTHNAMKSGMLAAEATYE 121 (246)
Q Consensus 81 kl~~~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lAAeai~~ 121 (246)
+..-+++.++||.++-.-++ .|.|...|++||+.++.
T Consensus 347 ~Ts~p~IyAiGDv~~~~p~L----a~~A~~eg~~aa~~i~g 383 (542)
T 4b1b_A 347 CTNIPSIFAVGDVAENVPEL----APVAIKAGEILARRLFK 383 (542)
T ss_dssp BCSSTTEEECTTSBTTCCCC----HHHHHHHHHHHHHHHHS
T ss_pred cccCCCeEEeccccCCchhH----HHHHHHHHHHHHHHHhc
Confidence 45679999999998643223 37899999999988763
No 237
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=21.96 E-value=28 Score=28.72 Aligned_cols=28 Identities=18% Similarity=0.325 Sum_probs=24.1
Q ss_pred cceEEeccccccccc--ccccCC---CCCceee
Q psy2242 206 ERLQINAQNCIHCKT--CDIKDP---TQNINWV 233 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~--c~i~~p---~~~i~w~ 233 (246)
..+.++...|+||+. |.-.|| ++.|...
T Consensus 63 ~~~~~~~~~C~~C~~p~C~~~CP~~~~gAi~~~ 95 (214)
T 1h0h_B 63 IDWLFFPDQCRHCIAPPCKATADMEDESAIIHD 95 (214)
T ss_dssp EEEEEEEECCCCCSSCHHHHHHTTTCTTSEEEC
T ss_pred ceeeecCCcCcCcCCchhhccCCccccccEEec
Confidence 467788999999996 999999 8888765
No 238
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=21.19 E-value=37 Score=29.27 Aligned_cols=27 Identities=19% Similarity=0.520 Sum_probs=23.0
Q ss_pred cceEEeccccccccc--ccccCCCCCceee
Q psy2242 206 ERLQINAQNCIHCKT--CDIKDPTQNINWV 233 (246)
Q Consensus 206 ~~~~i~~~nc~~c~~--c~i~~p~~~i~w~ 233 (246)
.++.++...|.||+. |.-.||+ .|...
T Consensus 59 ~~~~~~~~~C~~C~~p~C~~~CP~-Ai~~~ 87 (274)
T 1ti6_B 59 NDINYRPTPCMHCENAPCVAKGNG-AVYQR 87 (274)
T ss_dssp CEEEEEEECCCCCTTCHHHHHTTT-SEEEC
T ss_pred ceeeEcCCcCCCCCChHHHhhChH-Hhhhc
Confidence 467788999999998 9999999 88654
No 239
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=20.73 E-value=23 Score=21.46 Aligned_cols=9 Identities=56% Similarity=1.113 Sum_probs=7.1
Q ss_pred ccccccccc
Q psy2242 216 IHCKTCDIK 224 (246)
Q Consensus 216 ~~c~~c~i~ 224 (246)
-+|.+|||.
T Consensus 9 ~~C~~C~Is 17 (36)
T 1fu9_A 9 KYCSTCDIS 17 (36)
T ss_dssp SEETTTTEE
T ss_pred Ceeccccce
Confidence 379999984
No 240
>2imh_A Hypothetical protein UNP Q5LQD5_silpo; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.57A {Silicibacter pomeroyi} SCOP: d.153.1.7
Probab=20.09 E-value=2.4e+02 Score=23.81 Aligned_cols=91 Identities=18% Similarity=0.245 Sum_probs=53.6
Q ss_pred EEEEEEccCCCCCCC-------------CHHHHHHHHh-cCCCcc--ccc---cCCeEeee-cceeeecCCCccCCcccc
Q psy2242 25 AVGFVVGLDYTNPYL-------------SPFKEFQRFK-THPAVR--PVF---EGGKRIAY-GARALNEGGLQAIPRLTF 84 (246)
Q Consensus 25 sVGlv~~l~~~~~~~-------------~p~~~l~~~k-~hP~i~--~~L---~gg~~i~y-~a~~ip~gg~~~~pkl~~ 84 (246)
-||.|....+.||.+ ++.+.++++. ..|... .+. ..|+...| |...++ +.. ...+
T Consensus 38 gvGAVATQ~~tnp~l~G~~gL~lL~~G~~a~~al~~l~~~D~~~~~RQ~~vvD~~G~~A~~TG~~~~~---~~g--~~~g 112 (231)
T 2imh_A 38 NAGMSASQGAAPSTFWGEEVLQHLRDGSHPEDAVNHVTSQDSGRAYRQLAAMDLLGNAAAFTGSENQD---IKG--SVTF 112 (231)
T ss_dssp TTEEEEEESSSCCHHHHHHHHHHHHTTCCHHHHHHHHHHTCTTGGGCEEEEEETTSCEEEEECTTSCS---SCE--EEEE
T ss_pred CcceEEecccCCccccCHHHHHHHHcCCCHHHHHHHHHhcCCCcccceEEEECCCCCeEEEECCCchh---hhh--cccC
Confidence 367777777777765 6888888875 344331 110 11222111 121111 111 3455
Q ss_pred CCEEEeccCccCCCCcccccchhHHHHHHHH-----HHHHHHHHHhC
Q psy2242 85 PGGCLVGCTAGFLNVPKIKGTHNAMKSGMLA-----AEATYEALAEA 126 (246)
Q Consensus 85 ~G~llVGDAAG~vdp~~~~Gi~~Am~SG~lA-----Aeai~~al~~g 126 (246)
+++...| |.+.++.+-.||..+..+ +|-+++||+.+
T Consensus 113 ~~~avaG------N~La~~~V~~Am~~af~~~~g~LaeRLlaAL~Ag 153 (231)
T 2imh_A 113 ASGIASG------NMLGDNSVLGAMTEAFVASDLTFERRLLAALIAA 153 (231)
T ss_dssp TTEEEEE------ESCSCTHHHHHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred CCeEEEe------cccCCccHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 6665555 889999999999999874 66677788654
Done!