Query psy2244
Match_columns 73
No_of_seqs 105 out of 175
Neff 3.6
Searched_HMMs 29240
Date Fri Aug 16 19:50:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h0g_L DNA-directed RNA polyme 99.9 1E-23 3.4E-28 129.8 2.0 50 9-58 13-62 (63)
2 1twf_L ABC10-alpha, DNA-direct 99.8 8.3E-22 2.8E-26 122.5 2.6 47 12-58 23-69 (70)
3 4ayb_P DNA-directed RNA polyme 99.3 5.8E-13 2E-17 78.7 2.1 37 17-53 3-42 (48)
4 2lcq_A Putative toxin VAPC6; P 97.5 5.3E-05 1.8E-09 50.4 2.7 34 16-50 131-164 (165)
5 2kdx_A HYPA, hydrogenase/ureas 97.0 0.00037 1.3E-08 44.8 2.7 33 14-46 70-102 (119)
6 2gmg_A Hypothetical protein PF 96.2 0.0013 4.5E-08 43.5 0.9 31 15-45 65-95 (105)
7 3na7_A HP0958; flagellar bioge 96.0 0.0029 9.8E-08 44.9 2.2 31 19-50 200-237 (256)
8 3a43_A HYPD, hydrogenase nicke 95.6 0.0052 1.8E-07 40.9 2.0 34 14-47 67-120 (139)
9 3pwf_A Rubrerythrin; non heme 95.1 0.016 5.6E-07 39.6 3.3 32 9-42 130-161 (170)
10 1vq8_Z 50S ribosomal protein L 94.1 0.011 3.7E-07 37.1 0.5 34 11-44 21-55 (83)
11 3j21_g 50S ribosomal protein L 93.3 0.033 1.1E-06 32.4 1.5 27 16-45 13-39 (51)
12 1gh9_A 8.3 kDa protein (gene M 92.8 0.066 2.3E-06 32.7 2.4 33 17-51 4-37 (71)
13 6rxn_A Rubredoxin; electron tr 92.8 0.047 1.6E-06 31.0 1.6 27 17-43 4-39 (46)
14 2kn9_A Rubredoxin; metalloprot 92.0 0.12 4.2E-06 32.4 3.0 38 5-42 15-68 (81)
15 1lko_A Rubrerythrin all-iron(I 91.8 0.08 2.7E-06 36.3 2.0 28 15-43 153-180 (191)
16 1yuz_A Nigerythrin; rubrythrin 90.4 0.19 6.6E-06 34.9 2.9 28 14-43 168-195 (202)
17 2k4x_A 30S ribosomal protein S 90.0 0.18 6.3E-06 29.1 2.2 38 12-49 13-51 (55)
18 1dx8_A Rubredoxin; electron tr 89.2 0.21 7.1E-06 30.3 2.1 27 16-42 6-48 (70)
19 1pft_A TFIIB, PFTFIIBN; N-term 89.0 0.15 5.2E-06 27.9 1.3 26 17-42 5-32 (50)
20 2jrp_A Putative cytoplasmic pr 88.3 0.21 7.3E-06 31.4 1.7 51 9-64 9-60 (81)
21 3jyw_9 60S ribosomal protein L 88.0 0.087 3E-06 32.6 -0.2 34 11-44 20-54 (72)
22 2ct7_A Ring finger protein 31; 87.8 0.88 3E-05 27.4 4.3 42 5-46 12-55 (86)
23 2v3b_B Rubredoxin 2, rubredoxi 87.8 0.34 1.2E-05 28.0 2.3 27 17-43 3-45 (55)
24 1e8j_A Rubredoxin; iron-sulfur 87.1 0.38 1.3E-05 27.5 2.2 27 17-43 3-45 (52)
25 1yk4_A Rubredoxin, RD; electro 87.0 0.51 1.8E-05 27.0 2.7 27 17-43 2-44 (52)
26 3uk3_C Zinc finger protein 217 86.2 0.38 1.3E-05 24.6 1.7 29 16-44 3-42 (57)
27 1ltl_A DNA replication initiat 86.0 0.43 1.5E-05 34.0 2.5 31 14-44 131-166 (279)
28 3j20_Y 30S ribosomal protein S 86.0 0.37 1.3E-05 27.3 1.7 28 16-43 18-46 (50)
29 1x5w_A Zinc finger protein 64, 85.8 0.74 2.5E-05 24.7 2.9 32 13-44 5-47 (70)
30 3m7n_A Putative uncharacterize 85.7 0.57 2E-05 31.6 2.9 32 13-45 136-167 (179)
31 1s24_A Rubredoxin 2; electron 85.7 0.46 1.6E-05 30.1 2.2 27 16-42 34-76 (87)
32 2epq_A POZ-, at HOOK-, and zin 85.5 0.27 9.2E-06 24.4 0.9 27 15-41 8-45 (45)
33 4gzn_C ZFP-57, zinc finger pro 85.3 0.65 2.2E-05 26.0 2.6 29 16-44 3-42 (60)
34 3j21_i 50S ribosomal protein L 85.0 0.13 4.6E-06 32.5 -0.5 34 11-44 29-63 (83)
35 2zet_C Melanophilin; complex, 84.9 0.62 2.1E-05 31.6 2.7 28 17-44 68-95 (153)
36 2akl_A PHNA-like protein PA012 84.8 0.36 1.2E-05 33.3 1.5 27 18-44 28-54 (138)
37 1vd4_A Transcription initiatio 84.6 0.75 2.6E-05 24.7 2.5 31 15-45 12-50 (62)
38 2k2d_A Ring finger and CHY zin 84.6 0.72 2.5E-05 28.3 2.7 28 15-42 35-63 (79)
39 4a17_Y RPL37A, 60S ribosomal p 84.2 0.18 6.2E-06 33.2 -0.2 34 11-44 30-64 (103)
40 4rxn_A Rubredoxin; electron tr 83.8 0.65 2.2E-05 26.9 2.1 27 17-43 3-45 (54)
41 3iz5_m 60S ribosomal protein L 83.6 0.16 5.3E-06 32.8 -0.7 34 11-44 30-64 (92)
42 2ayj_A 50S ribosomal protein L 83.6 0.62 2.1E-05 27.7 2.0 27 16-45 18-44 (56)
43 2lce_A B-cell lymphoma 6 prote 83.4 0.72 2.5E-05 25.0 2.1 34 11-44 11-55 (74)
44 3izc_m 60S ribosomal protein R 83.0 0.17 5.8E-06 32.6 -0.7 34 11-44 30-64 (92)
45 1bbo_A Human enhancer-binding 83.0 0.63 2.1E-05 23.7 1.7 27 18-44 2-39 (57)
46 1zbd_B Rabphilin-3A; G protein 82.3 0.89 3E-05 30.1 2.6 29 16-44 54-82 (134)
47 2adr_A ADR1; transcription reg 82.2 0.73 2.5E-05 23.8 1.8 28 17-44 2-40 (60)
48 2epr_A POZ-, at HOOK-, and zin 81.9 0.83 2.9E-05 22.9 1.9 31 12-42 7-48 (48)
49 1x6e_A Zinc finger protein 24; 81.8 1.2 4.1E-05 24.0 2.6 31 14-44 11-52 (72)
50 1dxg_A Desulforedoxin; non-hem 81.3 1.1 3.8E-05 23.5 2.3 25 16-42 5-31 (36)
51 2jne_A Hypothetical protein YF 79.8 0.61 2.1E-05 30.7 1.1 24 17-44 48-71 (101)
52 1ffk_W Ribosomal protein L37AE 79.6 0.53 1.8E-05 29.0 0.7 34 11-44 21-55 (73)
53 2lv2_A Insulinoma-associated p 79.4 1.3 4.5E-05 26.3 2.4 29 16-44 27-66 (85)
54 2vl6_A SSO MCM N-TER, minichro 79.3 1.4 4.8E-05 30.9 2.9 30 14-43 138-177 (268)
55 3cc2_Z 50S ribosomal protein L 78.7 0.51 1.8E-05 31.5 0.5 33 12-44 55-88 (116)
56 1qyp_A RNA polymerase II; tran 78.6 2.8 9.7E-05 23.4 3.6 28 16-43 14-52 (57)
57 1tfi_A Transcriptional elongat 77.6 1.6 5.3E-05 24.6 2.3 26 18-43 10-46 (50)
58 2kwq_A Protein MCM10 homolog; 77.5 1.5 5.3E-05 27.9 2.5 26 17-43 48-74 (92)
59 3j20_W 30S ribosomal protein S 76.5 4.9 0.00017 24.2 4.4 34 10-43 8-43 (63)
60 2yt9_A Zinc finger-containing 76.0 2.9 9.9E-05 23.1 3.1 12 17-28 7-18 (95)
61 2csz_A Synaptotagmin-like prot 75.2 1.5 5E-05 27.3 1.8 31 14-44 22-52 (76)
62 2d9k_A FLN29 gene product; zin 75.2 1 3.5E-05 25.6 1.1 30 16-45 16-54 (75)
63 2con_A RUH-035 protein, NIN on 74.6 2.2 7.6E-05 26.4 2.6 32 15-48 13-44 (79)
64 1llm_C Chimera of ZIF23-GCN4; 74.6 2.4 8.4E-05 23.5 2.6 27 17-43 3-40 (88)
65 2kmk_A Zinc finger protein GFI 74.4 2.6 8.7E-05 22.5 2.5 28 16-43 28-66 (82)
66 2eps_A POZ-, at HOOK-, and zin 73.9 2.6 9E-05 21.6 2.4 31 13-43 8-50 (54)
67 1qxf_A GR2, 30S ribosomal prot 73.4 4.7 0.00016 24.5 3.7 28 16-43 6-35 (66)
68 2d9h_A Zinc finger protein 692 73.3 2.1 7.2E-05 23.2 2.0 30 15-44 5-48 (78)
69 2drp_A Protein (tramtrack DNA- 73.1 2.9 9.8E-05 21.8 2.5 30 15-44 8-50 (66)
70 3p2a_A Thioredoxin 2, putative 72.8 2.4 8E-05 25.7 2.3 31 14-44 2-35 (148)
71 2lt7_A Transcriptional regulat 72.7 2.8 9.6E-05 26.2 2.8 29 15-43 20-59 (133)
72 2jvm_A Uncharacterized protein 72.5 2.1 7.2E-05 26.8 2.1 18 31-48 50-67 (80)
73 1yc5_A NAD-dependent deacetyla 72.3 2.8 9.5E-05 29.3 2.9 27 17-43 121-154 (246)
74 1dl6_A Transcription factor II 72.2 2.6 9E-05 24.1 2.3 25 19-43 13-39 (58)
75 1hxr_A Guanine nucleotide exch 71.6 2 6.7E-05 28.0 1.9 19 31-49 9-27 (115)
76 2jz8_A Uncharacterized protein 71.0 2.1 7.1E-05 27.3 1.8 21 28-48 42-62 (87)
77 1a1h_A QGSR zinc finger peptid 71.0 3.4 0.00012 22.5 2.6 27 17-43 34-71 (90)
78 3lpe_B DNA-directed RNA polyme 70.6 2 6.7E-05 25.3 1.5 19 19-42 3-21 (59)
79 3h0g_I DNA-directed RNA polyme 70.6 2.9 9.8E-05 26.5 2.5 24 20-43 7-35 (113)
80 2csh_A Zinc finger protein 297 70.1 4.6 0.00016 23.0 3.1 9 34-42 37-45 (110)
81 2ct1_A Transcriptional repress 70.1 3.2 0.00011 22.4 2.3 30 15-44 13-55 (77)
82 2xzm_6 RPS27E; ribosome, trans 69.9 8 0.00027 24.3 4.4 37 7-43 22-60 (81)
83 2jrr_A Uncharacterized protein 69.8 2.4 8E-05 25.7 1.8 18 31-48 37-54 (67)
84 2eod_A TNF receptor-associated 69.7 4.4 0.00015 21.4 2.8 31 16-46 9-49 (66)
85 1vzi_A Desulfoferrodoxin; ferr 69.7 3.1 0.00011 27.1 2.5 26 15-42 5-32 (126)
86 2elv_A Zinc finger protein 406 69.5 2.9 9.9E-05 19.2 1.8 15 14-28 6-20 (36)
87 1m2k_A Silent information regu 69.3 3.7 0.00013 28.7 3.0 28 17-44 121-152 (249)
88 2cot_A Zinc finger protein 435 69.0 2.5 8.5E-05 22.9 1.7 31 14-44 15-56 (77)
89 2fnf_X Putative RAS effector N 68.4 3.9 0.00013 24.1 2.6 23 19-44 37-59 (72)
90 2dlq_A GLI-kruppel family memb 68.3 4.1 0.00014 23.3 2.6 28 16-43 65-103 (124)
91 2dmd_A Zinc finger protein 64, 68.2 4 0.00014 22.5 2.5 11 17-27 36-46 (96)
92 3flo_B DNA polymerase alpha ca 67.9 3.5 0.00012 29.1 2.7 31 14-44 19-59 (206)
93 1rfh_A RAS association (ralgds 67.9 4.5 0.00015 22.8 2.7 24 18-44 23-46 (59)
94 1q1a_A HST2 protein; ternary c 67.8 3.8 0.00013 29.3 2.8 28 17-44 136-173 (289)
95 3p8b_A DNA-directed RNA polyme 67.5 2.2 7.4E-05 26.9 1.3 20 19-43 25-44 (81)
96 3irb_A Uncharacterized protein 67.2 2.3 8E-05 27.9 1.5 32 13-47 43-74 (145)
97 2i5o_A DNA polymerase ETA; zin 66.9 3 0.0001 22.7 1.7 13 16-28 8-20 (39)
98 2ytg_A ZFP-95, zinc finger pro 66.9 4.5 0.00015 19.6 2.3 16 15-30 10-25 (46)
99 2gai_A DNA topoisomerase I; zi 66.3 1.6 5.5E-05 35.0 0.7 49 16-68 555-604 (633)
100 1x6h_A Transcriptional repress 65.6 5.4 0.00019 21.4 2.7 30 15-44 13-57 (86)
101 3ir9_A Peptide chain release f 65.5 11 0.00037 25.3 4.7 49 1-49 60-118 (166)
102 2epw_A Zinc finger protein 268 64.8 5.3 0.00018 19.3 2.3 15 16-30 11-25 (46)
103 2odx_A Cytochrome C oxidase po 64.5 4.5 0.00015 24.9 2.3 19 28-46 50-68 (80)
104 2gnr_A Conserved hypothetical 63.7 3 0.0001 27.7 1.5 35 6-43 36-70 (145)
105 3u5c_b RP61, YS20, 40S ribosom 63.7 7.4 0.00025 24.5 3.3 36 8-43 25-62 (82)
106 1ma3_A SIR2-AF2, transcription 63.6 5.1 0.00018 28.1 2.8 26 17-42 123-155 (253)
107 2em8_A Zinc finger protein 224 63.5 4.3 0.00015 19.7 1.8 15 15-29 10-24 (46)
108 1f2i_G Fusion of N-terminal 17 62.9 6.8 0.00023 20.7 2.7 32 13-44 15-59 (73)
109 2yso_A ZFP-95, zinc finger pro 62.8 4.5 0.00015 19.6 1.8 14 16-29 11-24 (46)
110 1ryq_A DNA-directed RNA polyme 62.8 2.9 0.0001 25.5 1.3 23 16-43 10-32 (69)
111 3cng_A Nudix hydrolase; struct 62.7 9.1 0.00031 24.5 3.7 23 19-41 5-32 (189)
112 2yu8_A Zinc finger protein 347 62.7 5.8 0.0002 19.2 2.2 16 15-30 10-25 (46)
113 2wbt_A B-129; zinc finger; 2.7 62.6 3.2 0.00011 24.5 1.4 29 16-44 73-110 (129)
114 2eme_A Zinc finger protein 473 62.5 4.2 0.00014 19.6 1.6 14 16-29 11-24 (46)
115 1pqv_S STP-alpha, transcriptio 62.2 3.9 0.00013 30.0 2.0 28 16-43 267-305 (309)
116 1ptq_A Protein kinase C delta 61.9 6.7 0.00023 20.6 2.5 25 19-43 13-37 (50)
117 1vk6_A NADH pyrophosphatase; 1 61.7 5 0.00017 28.5 2.5 24 19-42 109-133 (269)
118 2ysp_A Zinc finger protein 224 61.4 3.7 0.00013 20.0 1.3 14 15-28 10-23 (46)
119 2kvh_A Zinc finger and BTB dom 61.2 4 0.00014 17.4 1.3 12 17-28 3-14 (27)
120 2eoo_A ZFP-95, zinc finger pro 61.2 4.9 0.00017 19.5 1.8 15 15-29 10-24 (46)
121 2emm_A ZFP-95, zinc finger pro 61.0 4.1 0.00014 19.7 1.5 15 15-29 10-24 (46)
122 2elq_A Zinc finger protein 406 60.9 4.9 0.00017 18.3 1.7 14 15-28 7-20 (36)
123 2ct0_A Non-SMC element 1 homol 60.6 6.2 0.00021 23.5 2.4 27 14-44 12-38 (74)
124 2eml_A Zinc finger protein 28 60.4 4.9 0.00017 19.5 1.7 15 15-29 10-24 (46)
125 2apo_B Ribosome biogenesis pro 60.3 4 0.00014 24.2 1.5 22 17-43 6-27 (60)
126 2ene_A Zinc finger protein 347 60.3 4.7 0.00016 19.5 1.6 15 15-29 10-24 (46)
127 2em5_A ZFP-95, zinc finger pro 59.9 4.7 0.00016 19.6 1.6 15 15-29 10-24 (46)
128 2l6l_A DNAJ homolog subfamily 59.9 7 0.00024 25.2 2.8 29 15-44 110-143 (155)
129 2ctd_A Zinc finger protein 512 59.8 5 0.00017 23.5 1.9 30 15-44 32-72 (96)
130 2ghf_A ZHX1, zinc fingers and 59.7 7.2 0.00025 23.7 2.7 33 12-44 13-60 (102)
131 2kvf_A Zinc finger and BTB dom 59.5 4.3 0.00015 17.3 1.3 12 17-28 3-14 (28)
132 2elm_A Zinc finger protein 406 59.5 6.2 0.00021 18.4 1.9 14 15-28 7-20 (37)
133 1v54_F VI, cytochrome C oxidas 59.3 6.3 0.00022 25.1 2.4 17 29-45 74-90 (98)
134 2els_A Zinc finger protein 406 59.2 5.7 0.00019 18.1 1.7 13 16-28 8-20 (36)
135 2m0d_A Zinc finger and BTB dom 59.1 4.3 0.00015 17.2 1.2 12 17-28 3-14 (30)
136 2ctu_A Zinc finger protein 483 59.1 2.1 7.1E-05 22.4 0.1 29 15-43 16-48 (73)
137 3qt1_I DNA-directed RNA polyme 59.0 4.7 0.00016 26.6 1.9 36 7-42 14-54 (133)
138 2en1_A Zinc finger protein 224 58.9 4.4 0.00015 19.6 1.4 15 15-29 10-24 (46)
139 2eq0_A Zinc finger protein 347 58.8 5.6 0.00019 19.2 1.7 14 15-28 10-23 (46)
140 2emy_A Zinc finger protein 268 58.7 5.7 0.00019 19.2 1.7 15 15-29 10-24 (46)
141 2ee8_A Protein ODD-skipped-rel 58.5 5 0.00017 22.6 1.7 28 16-43 16-54 (106)
142 1twf_I B12.6, DNA-directed RNA 58.4 2.4 8.2E-05 27.2 0.3 26 19-44 6-36 (122)
143 1znf_A 31ST zinc finger from X 58.4 3 0.0001 17.6 0.6 11 18-28 2-12 (27)
144 2emx_A Zinc finger protein 268 58.2 6.1 0.00021 18.9 1.8 14 16-29 9-22 (44)
145 2emp_A Zinc finger protein 347 58.2 5.6 0.00019 19.2 1.7 15 15-29 10-24 (46)
146 1k81_A EIF-2-beta, probable tr 58.1 2.7 9.2E-05 22.2 0.4 26 19-44 2-31 (36)
147 2m0f_A Zinc finger and BTB dom 58.1 4.6 0.00016 17.0 1.2 12 17-28 2-13 (29)
148 2i13_A AART; DNA binding, zinc 58.1 7.3 0.00025 24.3 2.6 10 18-27 134-143 (190)
149 2em9_A Zinc finger protein 224 58.1 5.5 0.00019 19.2 1.6 13 16-28 11-23 (46)
150 1q14_A HST2 protein; histone d 57.9 7.7 0.00026 29.1 3.1 29 16-44 143-181 (361)
151 2ytd_A Zinc finger protein 473 57.9 5.8 0.0002 19.2 1.7 14 16-29 11-24 (46)
152 2em7_A Zinc finger protein 224 57.5 5.6 0.00019 19.2 1.6 13 16-28 11-23 (46)
153 2enz_A NPKC-theta, protein kin 57.3 9.8 0.00033 21.4 2.8 26 19-44 25-50 (65)
154 1rik_A E6APC1 peptide; E6-bind 57.3 5.8 0.0002 16.8 1.5 11 18-28 3-13 (29)
155 2elz_A Zinc finger protein 224 57.1 4 0.00014 19.9 1.0 14 15-28 10-23 (46)
156 2el6_A Zinc finger protein 268 57.0 5.8 0.0002 19.2 1.6 14 15-28 10-23 (46)
157 3glr_A NAD-dependent deacetyla 56.9 6.7 0.00023 28.6 2.5 28 16-43 138-172 (285)
158 1wfh_A Zinc finger (AN1-like) 56.9 6 0.0002 23.8 1.9 30 10-43 8-37 (64)
159 3iz6_X 40S ribosomal protein S 56.8 9.2 0.00031 24.3 2.8 32 12-43 31-64 (86)
160 1y07_A Desulfoferrodoxin (RBO) 56.6 6.2 0.00021 25.7 2.1 28 13-42 3-33 (128)
161 2kvg_A Zinc finger and BTB dom 56.6 4.1 0.00014 17.6 0.9 12 17-28 3-14 (27)
162 2enc_A Zinc finger protein 224 56.4 6 0.0002 19.1 1.6 14 15-28 10-23 (46)
163 2emh_A Zinc finger protein 484 56.3 5.6 0.00019 19.2 1.5 15 15-29 10-24 (46)
164 2qkd_A Zinc finger protein ZPR 56.1 2.5 8.5E-05 32.8 0.1 29 16-44 219-259 (404)
165 2en8_A Zinc finger protein 224 56.1 5.8 0.0002 19.1 1.5 14 15-28 10-23 (46)
166 2eov_A Zinc finger protein 484 56.0 4.6 0.00016 19.5 1.1 14 16-29 11-24 (46)
167 2elr_A Zinc finger protein 406 55.9 3.9 0.00013 18.6 0.8 13 16-28 8-20 (36)
168 2k3r_A Ribonuclease P protein 55.4 4.5 0.00015 26.3 1.2 29 18-46 61-103 (123)
169 2ep2_A Zinc finger protein 484 55.3 7.3 0.00025 18.8 1.8 15 15-29 10-24 (46)
170 2en6_A Zinc finger protein 268 55.3 5.4 0.00018 19.3 1.3 15 15-29 10-24 (46)
171 2el4_A Zinc finger protein 268 55.3 6.7 0.00023 18.9 1.7 15 15-29 10-24 (46)
172 3u50_C Telomerase-associated p 55.3 5.5 0.00019 27.4 1.7 28 16-43 41-68 (172)
173 2emf_A Zinc finger protein 484 54.8 7.4 0.00025 18.8 1.8 14 15-28 10-23 (46)
174 2lvu_A Zinc finger and BTB dom 59.6 2.6 8.9E-05 17.9 0.0 13 17-29 2-14 (26)
175 2ely_A Zinc finger protein 224 54.5 4.1 0.00014 19.8 0.8 15 16-30 11-25 (46)
176 3nw0_A Non-structural maintena 54.3 7.2 0.00025 27.5 2.3 24 17-44 180-203 (238)
177 2y69_F Cytochrome C oxidase su 53.8 9.5 0.00033 25.5 2.7 18 29-46 105-122 (129)
178 2elp_A Zinc finger protein 406 53.5 9.6 0.00033 17.3 2.0 13 16-28 8-20 (37)
179 2eq4_A Zinc finger protein 224 52.9 4.8 0.00016 19.4 0.9 13 16-28 11-23 (46)
180 2riq_A Poly [ADP-ribose] polym 52.5 4.4 0.00015 27.9 0.9 25 32-64 76-100 (160)
181 1z2q_A LM5-1; membrane protein 52.4 12 0.00043 22.2 2.8 29 13-42 17-45 (84)
182 1fv5_A First zinc finger of U- 52.3 4.6 0.00016 20.6 0.8 19 12-30 3-21 (36)
183 2elx_A Zinc finger protein 406 52.3 6.6 0.00023 17.5 1.3 12 17-28 7-18 (35)
184 2epz_A Zinc finger protein 28 51.6 5.2 0.00018 19.4 0.9 13 16-28 11-23 (46)
185 1wfp_A Zinc finger (AN1-like) 51.5 11 0.00038 23.2 2.5 29 11-43 19-47 (74)
186 2fiy_A Protein FDHE homolog; F 51.1 9.5 0.00032 28.2 2.6 27 14-43 205-231 (309)
187 2ytr_A Zinc finger protein 347 51.1 3.9 0.00013 19.8 0.3 13 16-28 11-23 (46)
188 3axs_A Probable N(2),N(2)-dime 51.0 12 0.0004 28.1 3.1 30 16-45 243-274 (392)
189 2ep0_A Zinc finger protein 28 50.9 8.2 0.00028 18.6 1.6 15 15-29 10-24 (46)
190 2eop_A Zinc finger protein 268 50.9 5.5 0.00019 19.2 0.9 13 16-28 11-23 (46)
191 2dlk_A Novel protein; ZF-C2H2 50.8 8.4 0.00029 20.4 1.7 12 17-28 38-51 (79)
192 2f9y_B Acetyl-coenzyme A carbo 50.7 5.1 0.00017 29.3 1.0 34 11-44 18-53 (304)
193 1faq_A RAF-1; transferase, ser 50.4 10 0.00036 20.1 2.1 22 18-43 15-36 (52)
194 2ytq_A Zinc finger protein 268 50.3 6.2 0.00021 19.1 1.0 14 15-28 10-23 (46)
195 2aus_D NOP10, ribosome biogene 50.2 9 0.00031 22.7 1.9 23 17-44 5-27 (60)
196 4bbr_M Transcription initiatio 50.2 5.2 0.00018 29.5 1.0 27 16-42 20-50 (345)
197 1srk_A Zinc finger protein ZFP 49.8 7.9 0.00027 17.4 1.3 13 16-28 6-18 (35)
198 2eoq_A Zinc finger protein 224 49.8 5.4 0.00019 19.3 0.8 14 15-28 10-23 (46)
199 3uej_A NPKC-delta, protein kin 49.6 13 0.00045 20.8 2.5 25 19-43 22-46 (65)
200 3u31_A SIR2A, transcriptional 49.5 9.6 0.00033 27.7 2.3 26 17-43 154-190 (290)
201 1klr_A Zinc finger Y-chromosom 49.5 4.5 0.00016 17.1 0.4 11 18-28 3-13 (30)
202 2elt_A Zinc finger protein 406 49.1 10 0.00035 17.0 1.7 13 16-28 8-20 (36)
203 1paa_A Yeast transcription fac 49.0 5.1 0.00018 17.2 0.6 11 18-28 3-13 (30)
204 2emk_A Zinc finger protein 28 49.0 6.1 0.00021 19.2 0.9 15 15-29 10-24 (46)
205 1wg2_A Zinc finger (AN1-like) 48.9 8.6 0.00029 23.1 1.7 29 11-43 9-37 (64)
206 1ard_A Yeast transcription fac 48.5 5.1 0.00017 16.9 0.5 11 18-28 3-13 (29)
207 2em0_A Zinc finger protein 224 48.0 6 0.00021 19.1 0.8 14 15-28 10-23 (46)
208 3f9v_A Minichromosome maintena 47.9 6.8 0.00023 30.5 1.4 29 15-43 133-171 (595)
209 2yuu_A NPKC-delta, protein kin 47.8 14 0.00048 21.7 2.5 25 19-43 30-54 (83)
210 2m0e_A Zinc finger and BTB dom 47.5 6.2 0.00021 16.5 0.7 11 18-28 3-13 (29)
211 2jr7_A DPH3 homolog; DESR1, CS 47.2 23 0.00078 22.3 3.6 29 15-44 21-55 (89)
212 2eoe_A Zinc finger protein 347 47.1 5.8 0.0002 19.1 0.6 13 16-28 11-23 (46)
213 2ytn_A Zinc finger protein 347 47.0 6.8 0.00023 18.9 0.9 13 16-28 11-23 (46)
214 2jp9_A Wilms tumor 1; DNA bind 46.9 15 0.00053 20.7 2.6 10 18-27 67-76 (119)
215 1h7b_A Anaerobic ribonucleotid 46.7 4.6 0.00016 32.5 0.3 45 17-61 540-586 (605)
216 1x0t_A Ribonuclease P protein 46.7 9 0.00031 24.6 1.6 25 18-42 66-102 (120)
217 2ytm_A Zinc finger protein 28 46.3 5.9 0.0002 19.3 0.6 13 16-28 11-23 (46)
218 3po3_S Transcription elongatio 45.9 13 0.00043 25.4 2.4 28 16-43 136-174 (178)
219 1y8f_A UNC-13 homolog A, MUNC1 45.8 12 0.00043 21.1 2.0 25 19-43 26-50 (66)
220 2enn_A NPKC-theta, protein kin 45.8 17 0.00057 21.2 2.6 27 18-44 35-61 (77)
221 2eli_A Protein kinase C alpha 45.7 16 0.00054 21.7 2.6 25 19-43 30-54 (85)
222 2dkt_A Ring finger and CHY zin 45.7 11 0.00037 25.6 2.0 24 15-42 56-79 (143)
223 2epc_A Zinc finger protein 32; 45.3 10 0.00035 17.7 1.4 13 16-28 10-22 (42)
224 2zjr_Z 50S ribosomal protein L 45.2 12 0.00042 21.7 2.0 26 13-42 26-51 (60)
225 1wff_A Riken cDNA 2810002D23 p 45.1 13 0.00044 23.4 2.1 24 16-42 24-47 (85)
226 1s5p_A NAD-dependent deacetyla 44.2 13 0.00046 25.6 2.3 27 17-43 113-143 (235)
227 2lvr_A Zinc finger and BTB dom 49.8 4.9 0.00017 17.2 0.0 13 17-29 3-15 (30)
228 2lvt_A Zinc finger and BTB dom 49.5 4.9 0.00017 17.2 0.0 13 17-29 2-14 (29)
229 2vrw_B P95VAV, VAV1, proto-onc 43.4 15 0.00051 26.5 2.5 27 18-44 358-384 (406)
230 1p7a_A BF3, BKLF, kruppel-like 43.1 6.4 0.00022 17.9 0.4 13 16-28 10-22 (37)
231 3k7a_M Transcription initiatio 42.7 10 0.00036 27.5 1.6 26 17-42 21-50 (345)
232 3o9x_A Uncharacterized HTH-typ 42.3 16 0.00054 22.2 2.2 11 35-45 3-13 (133)
233 1njq_A Superman protein; zinc- 42.2 11 0.00037 17.5 1.2 13 16-28 5-17 (39)
234 3f2b_A DNA-directed DNA polyme 42.1 16 0.00054 31.5 2.8 62 5-67 488-560 (1041)
235 2pk7_A Uncharacterized protein 41.7 14 0.00049 21.9 1.9 29 19-49 10-39 (69)
236 1l1o_C Replication protein A 7 41.6 12 0.00041 25.0 1.7 28 15-42 41-70 (181)
237 2dmi_A Teashirt homolog 3; zin 41.6 16 0.00056 20.8 2.1 13 16-28 18-30 (115)
238 1wjp_A Zinc finger protein 295 41.5 4 0.00014 23.3 -0.6 30 15-44 14-52 (107)
239 2yu5_A Zinc finger protein 473 41.2 14 0.00048 17.5 1.5 14 16-29 11-24 (44)
240 2d74_B Translation initiation 41.0 11 0.00039 25.4 1.5 26 19-44 106-135 (148)
241 3k1f_M Transcription initiatio 41.0 9.5 0.00032 27.5 1.2 28 16-43 20-51 (197)
242 2j7j_A Transcription factor II 40.8 23 0.0008 18.6 2.5 10 18-27 2-13 (85)
243 1ubd_C Protein (YY1 zinc finge 40.7 20 0.00068 20.5 2.4 13 16-28 33-45 (124)
244 3hcs_A TNF receptor-associated 40.7 22 0.00075 22.6 2.8 30 18-47 111-150 (170)
245 2hf1_A Tetraacyldisaccharide-1 40.4 14 0.00047 21.9 1.7 30 18-49 9-39 (68)
246 2ept_A Zinc finger protein 32; 40.2 14 0.00047 17.2 1.4 14 15-28 8-21 (41)
247 2epv_A Zinc finger protein 268 40.2 13 0.00043 17.8 1.3 13 16-28 11-23 (44)
248 2js4_A UPF0434 protein BB2007; 40.1 15 0.00051 21.8 1.8 29 19-49 10-39 (70)
249 2kfq_A FP1; protein, de novo p 39.8 5.6 0.00019 18.0 -0.1 11 18-28 3-13 (32)
250 2jr6_A UPF0434 protein NMA0874 39.7 15 0.00051 21.7 1.7 23 19-41 10-33 (68)
251 2gqj_A Zinc finger protein KIA 39.6 2.9 9.8E-05 24.1 -1.5 30 15-44 22-64 (98)
252 1yop_A KTI11P; zinc finger, me 39.6 21 0.00072 22.0 2.5 31 15-46 21-57 (83)
253 2en2_A B-cell lymphoma 6 prote 39.5 13 0.00044 17.4 1.2 13 16-28 10-22 (42)
254 1vfy_A Phosphatidylinositol-3- 39.4 20 0.00069 20.7 2.3 23 19-42 13-35 (73)
255 2elo_A Zinc finger protein 406 38.5 8.6 0.00029 17.5 0.4 13 16-28 8-20 (37)
256 1wge_A Hypothetical protein 26 38.1 34 0.0012 21.1 3.3 29 15-44 28-62 (83)
257 2emi_A Zinc finger protein 484 37.9 16 0.00054 17.5 1.4 14 15-28 10-23 (46)
258 1rim_A E6APC2 peptide; E6-bind 37.9 8.5 0.00029 17.5 0.4 11 18-28 3-13 (33)
259 1weo_A Cellulose synthase, cat 37.8 16 0.00055 23.5 1.8 28 16-43 15-44 (93)
260 2wbs_A Krueppel-like factor 4; 37.6 26 0.00088 18.7 2.4 28 16-43 34-74 (89)
261 2el5_A Zinc finger protein 268 37.5 15 0.00052 17.1 1.3 13 16-28 9-21 (42)
262 3ga8_A HTH-type transcriptiona 37.2 22 0.00076 20.6 2.2 13 35-47 3-15 (78)
263 1kbe_A Kinase suppressor of RA 37.1 15 0.00052 20.3 1.4 23 18-44 15-37 (49)
264 3cw2_K Translation initiation 37.1 12 0.00041 25.0 1.1 25 19-43 105-133 (139)
265 4b6d_A RAC GTPase-activating p 37.1 19 0.00066 20.5 1.9 23 19-42 21-43 (61)
266 2ytp_A Zinc finger protein 484 36.9 16 0.00056 17.5 1.4 14 15-28 10-23 (46)
267 2cor_A Pinch protein; LIM doma 36.9 21 0.00071 20.2 2.0 28 17-44 15-51 (79)
268 2eof_A Zinc finger protein 268 36.8 15 0.00051 17.2 1.2 13 16-28 11-23 (44)
269 1nee_A EIF-2-beta, probable tr 36.6 19 0.00065 24.0 2.0 25 19-43 104-132 (138)
270 3bvo_A CO-chaperone protein HS 36.3 19 0.00066 24.8 2.1 25 18-42 11-35 (207)
271 3u5e_m 60S ribosomal protein L 36.2 16 0.00056 22.7 1.6 24 17-43 93-118 (128)
272 1wd2_A Ariadne-1 protein homol 36.1 13 0.00046 21.2 1.1 28 19-46 8-38 (60)
273 2emb_A Zinc finger protein 473 35.9 15 0.00051 17.4 1.1 13 16-28 11-23 (44)
274 2ema_A Zinc finger protein 347 35.8 17 0.0006 17.3 1.4 14 15-28 10-23 (46)
275 2en3_A ZFP-95, zinc finger pro 35.7 18 0.00063 17.2 1.5 14 16-29 11-24 (46)
276 4gop_C Putative uncharacterize 35.7 31 0.0011 25.6 3.3 29 15-43 306-336 (444)
277 2eow_A Zinc finger protein 347 35.4 18 0.0006 17.2 1.4 14 15-28 10-23 (46)
278 2yw8_A RUN and FYVE domain-con 35.3 25 0.00086 20.7 2.3 24 18-42 20-43 (82)
279 3iuf_A Zinc finger protein UBI 35.3 16 0.00055 18.2 1.2 13 16-28 6-18 (48)
280 2em4_A Zinc finger protein 28 35.1 17 0.00058 17.4 1.3 15 15-29 10-24 (46)
281 1dvp_A HRS, hepatocyte growth 35.0 24 0.00083 23.9 2.4 24 18-42 162-185 (220)
282 2yrj_A Zinc finger protein 473 34.9 18 0.00063 17.1 1.4 14 15-28 10-23 (46)
283 2yto_A Zinc finger protein 484 34.9 19 0.00064 17.3 1.4 13 16-28 11-23 (46)
284 1tot_A CREB-binding protein; z 34.8 17 0.00057 20.3 1.3 22 16-41 5-26 (52)
285 1joc_A EEA1, early endosomal a 34.8 26 0.0009 22.3 2.4 29 13-42 65-93 (125)
286 2eos_A B-cell lymphoma 6 prote 34.7 12 0.00042 17.5 0.7 13 16-28 10-22 (42)
287 1wfl_A Zinc finger protein 216 34.4 17 0.00057 22.4 1.4 30 16-49 24-53 (74)
288 2e2z_A TIM15; protein import, 34.1 18 0.00061 23.4 1.5 31 16-46 12-50 (100)
289 2eox_A Zinc finger protein 473 33.9 18 0.0006 17.1 1.2 14 16-29 11-24 (44)
290 2ep3_A Zinc finger protein 484 33.8 19 0.00064 17.2 1.3 15 15-29 10-24 (46)
291 2em3_A Zinc finger protein 28 33.6 19 0.00065 17.2 1.3 15 15-29 10-24 (46)
292 2emj_A Zinc finger protein 28 33.6 19 0.00065 17.3 1.3 15 15-29 10-24 (46)
293 2yts_A Zinc finger protein 484 33.5 19 0.00064 17.1 1.3 14 15-28 10-23 (46)
294 2f9i_B Acetyl-coenzyme A carbo 33.3 12 0.00042 27.1 0.7 34 10-43 23-58 (285)
295 2eoy_A Zinc finger protein 473 33.2 23 0.00079 16.9 1.6 14 16-29 11-24 (46)
296 2kpi_A Uncharacterized protein 32.9 26 0.00088 19.8 2.0 23 19-42 12-36 (56)
297 2f2e_A PA1607; transcription f 32.9 27 0.00092 22.0 2.3 28 13-44 109-136 (146)
298 2ab3_A ZNF29; zinc finger prot 32.8 16 0.00055 15.2 0.9 11 18-28 3-15 (29)
299 2ytf_A Zinc finger protein 268 32.7 20 0.00067 17.0 1.3 15 15-29 10-24 (46)
300 1yui_A GAGA-factor; complex (D 32.6 20 0.00067 18.0 1.3 13 16-28 23-35 (54)
301 2eor_A Zinc finger protein 224 32.6 19 0.00065 17.1 1.2 13 16-28 11-23 (46)
302 2ytb_A Zinc finger protein 32; 32.5 12 0.00042 17.4 0.5 13 16-28 10-22 (42)
303 2eoz_A Zinc finger protein 473 32.4 16 0.00055 17.5 0.9 14 15-28 10-23 (46)
304 1j8f_A SIRT2, sirtuin 2, isofo 32.2 25 0.00086 25.7 2.3 27 17-43 159-194 (323)
305 2em2_A Zinc finger protein 28 31.9 21 0.00071 17.1 1.3 14 15-28 10-23 (46)
306 2emg_A Zinc finger protein 484 31.8 13 0.00045 17.8 0.5 13 16-28 11-23 (46)
307 2ytk_A Zinc finger protein 347 31.7 21 0.00073 17.0 1.3 15 15-29 10-24 (46)
308 2gag_D Heterotetrameric sarcos 31.6 12 0.00041 24.1 0.4 10 34-43 3-12 (99)
309 2wfu_B Probable insulin-like p 31.6 1.6 5.3E-05 22.2 -3.1 19 4-22 2-20 (26)
310 2ytj_A Zinc finger protein 484 31.5 22 0.00074 17.0 1.3 15 15-29 10-24 (46)
311 3t7l_A Zinc finger FYVE domain 31.2 35 0.0012 20.5 2.4 25 17-42 20-44 (90)
312 2epu_A Zinc finger protein 32; 31.1 17 0.00059 17.3 0.9 14 15-28 10-23 (45)
313 3ky9_A Proto-oncogene VAV; cal 31.0 30 0.001 26.5 2.6 26 19-44 531-556 (587)
314 2yte_A Zinc finger protein 473 30.3 15 0.0005 17.1 0.5 13 16-28 9-21 (42)
315 2zkr_2 60S ribosomal protein L 30.1 20 0.0007 23.1 1.3 32 15-49 14-45 (97)
316 3cxl_A N-chimerin; SH2, RHO-GA 29.1 34 0.0012 25.6 2.6 26 19-44 222-247 (463)
317 2poi_A Baculoviral IAP repeat- 29.0 28 0.00094 21.5 1.7 13 32-44 53-65 (94)
318 1x4u_A Zinc finger, FYVE domai 28.9 39 0.0013 19.9 2.3 24 18-42 15-38 (84)
319 1y02_A CARP2, FYVE-ring finger 28.8 22 0.00075 23.0 1.3 29 13-42 15-43 (120)
320 2yuc_A TNF receptor-associated 28.8 18 0.0006 20.2 0.8 29 19-47 18-57 (76)
321 3zyq_A Hepatocyte growth facto 28.7 33 0.0011 23.6 2.3 24 18-42 165-188 (226)
322 2lk0_A RNA-binding protein 5; 28.6 51 0.0018 16.5 2.5 24 16-42 4-27 (32)
323 2em6_A Zinc finger protein 224 28.5 18 0.00063 17.3 0.7 14 15-28 10-23 (46)
324 1wii_A Hypothetical UPF0222 pr 28.4 18 0.00062 22.4 0.8 34 14-47 20-60 (85)
325 2enf_A Zinc finger protein 347 28.3 17 0.00059 17.3 0.6 14 15-28 10-23 (46)
326 4esj_A Type-2 restriction enzy 28.2 17 0.00059 27.0 0.8 32 19-50 36-72 (257)
327 2jny_A Uncharacterized BCR; st 28.1 29 0.00099 20.5 1.7 30 18-49 11-41 (67)
328 3h99_A Methionyl-tRNA syntheta 27.6 29 0.001 26.4 2.0 30 20-49 171-200 (560)
329 1nui_A DNA primase/helicase; z 27.6 34 0.0012 23.2 2.2 26 18-43 15-42 (255)
330 2en9_A Zinc finger protein 28 27.6 19 0.00064 17.3 0.6 14 15-28 10-23 (46)
331 2enh_A Zinc finger protein 28 27.3 20 0.00067 17.2 0.7 16 15-30 10-25 (46)
332 1lv3_A Hypothetical protein YA 27.3 39 0.0013 20.3 2.1 13 34-46 9-21 (68)
333 2db6_A SH3 and cysteine rich d 26.9 14 0.00047 21.5 0.0 25 19-43 30-54 (74)
334 2eoj_A Zinc finger protein 268 26.8 16 0.00056 17.2 0.3 13 16-28 11-23 (44)
335 2epx_A Zinc finger protein 28 26.8 19 0.00063 17.1 0.5 14 15-28 10-23 (47)
336 2nn6_I 3'-5' exoribonuclease C 26.7 24 0.00084 24.3 1.3 28 15-43 167-194 (209)
337 2eon_A ZFP-95, zinc finger pro 26.7 19 0.00065 17.3 0.6 15 15-29 10-24 (46)
338 2yt5_A Metal-response element- 26.6 35 0.0012 18.8 1.7 25 18-42 7-31 (66)
339 2emz_A ZFP-95, zinc finger pro 26.5 17 0.00059 17.4 0.4 13 16-28 11-23 (46)
340 2ent_A Krueppel-like factor 15 26.5 50 0.0017 15.5 2.2 14 15-28 10-25 (48)
341 2eou_A Zinc finger protein 473 26.3 18 0.00062 17.1 0.4 13 16-28 11-23 (44)
342 2eq1_A Zinc finger protein 347 26.1 18 0.00062 17.2 0.4 14 15-28 10-23 (46)
343 2vpb_A Hpygo1, pygopus homolog 26.1 35 0.0012 19.6 1.7 29 13-42 4-33 (65)
344 2yth_A Zinc finger protein 224 26.1 20 0.00067 17.2 0.5 15 15-29 10-24 (46)
345 2yrm_A B-cell lymphoma 6 prote 25.9 22 0.00074 16.9 0.7 13 16-28 9-21 (43)
346 2eom_A ZFP-95, zinc finger pro 25.8 17 0.00059 17.5 0.3 14 15-28 10-23 (46)
347 2en7_A Zinc finger protein 268 25.8 15 0.00052 17.2 0.1 13 16-28 11-23 (44)
348 1ef4_A Subunit N, DNA-directed 25.7 18 0.00062 21.1 0.4 12 33-44 2-13 (55)
349 3d9t_A Baculoviral IAP repeat- 25.6 34 0.0012 21.0 1.7 13 32-44 46-58 (97)
350 3r8s_0 50S ribosomal protein L 25.4 46 0.0016 18.9 2.1 10 33-42 26-35 (56)
351 4g9i_A Hydrogenase maturation 25.3 13 0.00043 30.6 -0.4 30 19-48 158-192 (772)
352 3ttc_A HYPF, transcriptional r 25.2 12 0.00041 30.4 -0.6 26 19-44 69-99 (657)
353 2qra_D XIAP, baculoviral IAP r 24.5 36 0.0012 21.8 1.7 13 32-44 70-82 (111)
354 2ep1_A Zinc finger protein 484 24.5 18 0.00062 17.2 0.2 13 16-28 11-23 (46)
355 1wfk_A Zinc finger, FYVE domai 24.2 45 0.0015 20.1 2.0 24 18-42 10-33 (88)
356 2eoh_A Zinc finger protein 28 24.2 20 0.00069 17.1 0.4 13 16-28 11-23 (46)
357 1z60_A TFIIH basal transcripti 24.0 32 0.0011 19.9 1.3 12 16-27 29-40 (59)
358 2yti_A Zinc finger protein 347 23.8 17 0.00059 17.3 0.1 15 15-29 10-24 (46)
359 2eq2_A Zinc finger protein 347 23.5 18 0.00061 17.3 0.1 13 16-28 11-23 (46)
360 1twf_J DNA-directed RNA polyme 23.2 24 0.00083 21.4 0.7 12 33-44 3-14 (70)
361 2epp_A POZ-, at HOOK-, and zin 22.9 24 0.00081 20.0 0.5 18 12-29 8-25 (66)
362 2eq3_A Zinc finger protein 347 22.8 20 0.00067 17.0 0.2 13 16-28 11-23 (46)
363 1g47_A Pinch protein; LIM doma 22.8 45 0.0015 18.2 1.7 27 18-44 12-49 (77)
364 3m1d_A Baculoviral IAP repeat- 22.6 43 0.0015 20.1 1.7 13 32-44 44-56 (85)
365 3riy_A NAD-dependent deacetyla 22.5 37 0.0013 24.1 1.6 12 17-28 134-145 (273)
366 1x4l_A Skeletal muscle LIM-pro 22.5 27 0.00092 19.0 0.7 10 19-28 7-16 (72)
367 2l7x_A Envelope glycoprotein; 22.0 26 0.00088 21.9 0.6 10 35-44 31-40 (77)
368 2l8e_A Polyhomeotic-like prote 21.9 44 0.0015 18.7 1.6 11 36-46 20-30 (49)
369 2ppt_A Thioredoxin-2; thiredox 21.9 62 0.0021 19.9 2.4 29 16-44 13-44 (155)
370 3hl5_A Baculoviral IAP repeat- 21.9 47 0.0016 20.3 1.8 15 31-45 43-57 (95)
371 3v2d_5 50S ribosomal protein L 21.9 54 0.0018 18.9 2.0 28 15-49 28-55 (60)
372 1kaf_A Transcription regulator 21.8 53 0.0018 21.5 2.2 18 42-59 35-52 (108)
373 3u5c_a 40S ribosomal protein S 21.7 37 0.0013 22.6 1.4 13 32-44 18-30 (119)
374 1v5n_A PDI-like hypothetical p 21.7 44 0.0015 20.1 1.6 24 17-43 47-70 (89)
375 3vth_A Hydrogenase maturation 21.5 17 0.00057 30.0 -0.4 29 19-47 163-196 (761)
376 1g73_C Inhibitors of apoptosis 21.4 47 0.0016 21.4 1.8 14 31-44 57-70 (121)
377 2vm5_A Baculoviral IAP repeat- 21.4 46 0.0016 20.9 1.7 14 32-45 54-67 (106)
378 2row_A RHO-associated protein 21.0 73 0.0025 19.4 2.6 24 20-43 38-63 (84)
379 1jd5_A DIAP1, apoptosis 1 inhi 20.9 47 0.0016 21.6 1.7 14 32-45 58-71 (124)
380 2g2k_A EIF-5, eukaryotic trans 20.9 34 0.0012 23.6 1.1 33 19-51 98-136 (170)
381 3u6p_A Formamidopyrimidine-DNA 20.4 76 0.0026 22.6 2.9 18 35-52 246-263 (273)
382 2ehe_A Four and A half LIM dom 20.4 55 0.0019 18.2 1.8 10 19-28 17-26 (82)
383 1se0_A Apoptosis 1 inhibitor; 20.3 52 0.0018 21.1 1.8 15 31-45 45-59 (116)
384 1sp2_A SP1F2; zinc finger, tra 20.3 30 0.001 14.8 0.5 11 18-28 3-15 (31)
385 1igl_A Insulin-like growth fac 20.0 9.3 0.00032 22.7 -1.7 21 2-22 3-23 (67)
No 1
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=99.87 E-value=1e-23 Score=129.78 Aligned_cols=50 Identities=38% Similarity=0.701 Sum_probs=43.1
Q ss_pred cccCCcceEEEcCcCCcceecCCCCCeecCCCCCeEEEeeeCCeeEEEee
Q psy2244 9 GKCLPGDIEKYYLECHFENEIRPRDPIRCRECGYRIMYKKRTKRCILYFK 58 (73)
Q Consensus 9 ~~~~~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKkRt~r~vqf~~ 58 (73)
+...+++|.|+|++||.+++++.+++|||++||||||||+|+++++||.+
T Consensus 13 ~~~~~~~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RILyK~Rt~r~~~~~A 62 (63)
T 3h0g_L 13 NPPRPATMIYLCADCGARNTIQAKEVIRCRECGHRVMYKMRTKRMVQFEA 62 (63)
T ss_dssp ------CCCCBCSSSCCBCCCCSSSCCCCSSSCCCCCBCCCCCCCEEECC
T ss_pred CCCCCCCeEEECCCCCCeeecCCCCceECCCCCcEEEEEecCCceEEEEC
Confidence 56678899999999999999999999999999999999999999999986
No 2
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=99.83 E-value=8.3e-22 Score=122.50 Aligned_cols=47 Identities=30% Similarity=0.608 Sum_probs=43.6
Q ss_pred CCcceEEEcCcCCcceecCCCCCeecCCCCCeEEEeeeCCeeEEEee
Q psy2244 12 LPGDIEKYYLECHFENEIRPRDPIRCRECGYRIMYKKRTKRCILYFK 58 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKkRt~r~vqf~~ 58 (73)
.+.+++|+|++||.+|+++..|+|+|++||+|||||+||+|++||++
T Consensus 23 ~~~~v~Y~C~~CG~~~e~~~~d~irCp~CG~RILyK~R~~r~v~~~a 69 (70)
T 1twf_L 23 RTATLKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRLVQFEA 69 (70)
T ss_dssp --CCCCEECSSSCCEECCCTTSTTCCSSSCCCCCBCCCCSSCEEECC
T ss_pred CCceEEEECCCCCCcceeCCCCCccCCCCCceEeEecCCCccEEEec
Confidence 34689999999999999999999999999999999999999999986
No 3
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=99.31 E-value=5.8e-13 Score=78.69 Aligned_cols=37 Identities=22% Similarity=0.367 Sum_probs=31.1
Q ss_pred EEEcCcCCcceecC---CCCCeecCCCCCeEEEeeeCCee
Q psy2244 17 EKYYLECHFENEIR---PRDPIRCRECGYRIMYKKRTKRC 53 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik---~~d~IRC~~CG~RILyKkRt~r~ 53 (73)
.|+|++||++++.+ ..+.||||+||+||+||.|+...
T Consensus 3 iY~C~rCg~~fs~~el~~lP~IrCpyCGyrii~KvR~p~v 42 (48)
T 4ayb_P 3 VYRCGKCWKTFTDEQLKVLPGVRCPYCGYKIIFMVRKPTI 42 (48)
T ss_dssp --CCCCTTTTCCCCCSCCCSSSCCTTTCCSCEECCCCCSC
T ss_pred EEEeeccCCCccHHHHhhCCCcccCccCcEEEEEecCCcc
Confidence 59999999997755 56899999999999999999754
No 4
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=97.49 E-value=5.3e-05 Score=50.40 Aligned_cols=34 Identities=15% Similarity=0.253 Sum_probs=27.2
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCCeEEEeeeC
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGYRIMYKKRT 50 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKkRt 50 (73)
-.|+|..||..++.. .+..+||.||+++-.+.|.
T Consensus 131 ~~y~C~~Cg~~~~~~-~~~~~Cp~CG~~~~~~~~~ 164 (165)
T 2lcq_A 131 WRYVCIGCGRKFSTL-PPGGVCPDCGSKVKLIPRK 164 (165)
T ss_dssp CCEEESSSCCEESSC-CGGGBCTTTCCBEEECCCC
T ss_pred EEEECCCCCCcccCC-CCCCcCCCCCCcceeCCcC
Confidence 479999999999854 4446999999997666664
No 5
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=97.01 E-value=0.00037 Score=44.78 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=26.6
Q ss_pred cceEEEcCcCCcceecCCCCCeecCCCCCeEEE
Q psy2244 14 GDIEKYYLECHFENEIRPRDPIRCRECGYRIMY 46 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILy 46 (73)
.+..|+|.+||.+++++.....+||.||+..++
T Consensus 70 ~p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~~~~ 102 (119)
T 2kdx_A 70 EKVELECKDCSHVFKPNALDYGVCEKCHSKNVI 102 (119)
T ss_dssp ECCEEECSSSSCEECSCCSTTCCCSSSSSCCCE
T ss_pred ccceEEcCCCCCEEeCCCCCCCcCccccCCCcE
Confidence 478999999999999875443389999997554
No 6
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=96.16 E-value=0.0013 Score=43.47 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=25.6
Q ss_pred ceEEEcCcCCcceecCCCCCeecCCCCCeEE
Q psy2244 15 DIEKYYLECHFENEIRPRDPIRCRECGYRIM 45 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RIL 45 (73)
...|+|.+||.+|.-....+.|||.|+..=+
T Consensus 65 v~p~~C~~CG~~F~~~~~kPsrCP~CkSe~I 95 (105)
T 2gmg_A 65 IKPAQCRKCGFVFKAEINIPSRCPKCKSEWI 95 (105)
T ss_dssp ECCCBBTTTCCBCCCCSSCCSSCSSSCCCCB
T ss_pred EECcChhhCcCeecccCCCCCCCcCCCCCcc
Confidence 4679999999999555678899999998544
No 7
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.01 E-value=0.0029 Score=44.88 Aligned_cols=31 Identities=29% Similarity=0.517 Sum_probs=23.8
Q ss_pred EcCcCCcceec------C-CCCCeecCCCCCeEEEeeeC
Q psy2244 19 YYLECHFENEI------R-PRDPIRCRECGYRIMYKKRT 50 (73)
Q Consensus 19 iC~~Cg~e~~i------k-~~d~IRC~~CG~RILyKkRt 50 (73)
.|+.|+..+.. . ..+.++||+|| ||||....
T Consensus 200 ~C~GC~~~lppq~~~~i~~~~~Iv~Cp~Cg-RIL~~~~~ 237 (256)
T 3na7_A 200 ACGGCFIRLNDKIYTEVLTSGDMITCPYCG-RILYAEGA 237 (256)
T ss_dssp BCTTTCCBCCHHHHHHHHHSSSCEECTTTC-CEEECSCC
T ss_pred ccCCCCeeeCHHHHHHHHCCCCEEECCCCC-eeEEeCcc
Confidence 69999888653 2 44679999998 89996544
No 8
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=95.60 E-value=0.0052 Score=40.86 Aligned_cols=34 Identities=15% Similarity=0.318 Sum_probs=27.3
Q ss_pred cceEEEcCcCCcceecCC-----------CC---------CeecCCCCCeEEEe
Q psy2244 14 GDIEKYYLECHFENEIRP-----------RD---------PIRCRECGYRIMYK 47 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik~-----------~d---------~IRC~~CG~RILyK 47 (73)
.+..++|.+||.++.++. .. ..+||.||+.=++=
T Consensus 67 ~p~~~~C~~CG~~~~~~~~~~~~~~~~~~~~h~~p~~~~~~~~CP~Cgs~~~~i 120 (139)
T 3a43_A 67 EEAVFKCRNCNYEWKLKEVKDKFDERIKEDIHFIPEVVHAFLACPKCGSHDFEV 120 (139)
T ss_dssp ECCEEEETTTCCEEEGGGCTTCCSCCCGGGCCCCGGGCGGGCSCSSSSCCCEEE
T ss_pred cCCcEECCCCCCEEecccccccccccccccccccccccccCCcCccccCCccEE
Confidence 367899999999998866 32 68999999976653
No 9
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=95.11 E-value=0.016 Score=39.56 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=24.9
Q ss_pred cccCCcceEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 9 GKCLPGDIEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 9 ~~~~~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
|.....+..|+|..||-..+.+ .|-.||-||+
T Consensus 130 ~~~~~~~~~~~C~~CG~i~~~~--~p~~CP~Cg~ 161 (170)
T 3pwf_A 130 GEDIEIKKVYICPICGYTAVDE--APEYCPVCGA 161 (170)
T ss_dssp TCCCCCSCEEECTTTCCEEESC--CCSBCTTTCC
T ss_pred CCcCCCCCeeEeCCCCCeeCCC--CCCCCCCCCC
Confidence 4455567899999999998733 4459999997
No 10
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=94.15 E-value=0.011 Score=37.08 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=26.0
Q ss_pred cCCcceEEEcCcCCcceecCC-CCCeecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIRP-RDPIRCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~-~d~IRC~~CG~RI 44 (73)
++.+...|.|..||++...++ .....|++||+-+
T Consensus 21 e~~q~~~y~Cp~CG~~~v~r~atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 21 ESEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF 55 (83)
T ss_dssp HHHHHSCEECSSSCCEEEEEEETTEEEETTTCCEE
T ss_pred HHhccccCcCCCCCCcceeccCCCeEECCCCCCEe
Confidence 345567899999999766654 4568999999853
No 11
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=93.32 E-value=0.033 Score=32.42 Aligned_cols=27 Identities=33% Similarity=0.799 Sum_probs=22.0
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCCeEE
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGYRIM 45 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~RIL 45 (73)
..++|..|++.+ +....+|..|||..|
T Consensus 13 ~k~iCpkC~a~~---~~gaw~CrKCG~~~l 39 (51)
T 3j21_g 13 KKYVCLRCGATN---PWGAKKCRKCGYKRL 39 (51)
T ss_dssp SEEECTTTCCEE---CTTCSSCSSSSSCCC
T ss_pred CCccCCCCCCcC---CCCceecCCCCCccc
Confidence 579999999984 455689999999844
No 12
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=92.81 E-value=0.066 Score=32.74 Aligned_cols=33 Identities=21% Similarity=0.231 Sum_probs=27.0
Q ss_pred EEEcCcCCcceecCCC-CCeecCCCCCeEEEeeeCC
Q psy2244 17 EKYYLECHFENEIRPR-DPIRCRECGYRIMYKKRTK 51 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~-d~IRC~~CG~RILyKkRt~ 51 (73)
...|. ||.-.-.+.+ ...+|| ||.+|=.++++.
T Consensus 4 vv~C~-C~~~~~~~~~~kT~~C~-CG~~~~~~k~ri 37 (71)
T 1gh9_A 4 IFRCD-CGRALYSREGAKTRKCV-CGRTVNVKDRRI 37 (71)
T ss_dssp EEEET-TSCCEEEETTCSEEEET-TTEEEECCSSSC
T ss_pred EEECC-CCCEEEEcCCCcEEECC-CCCeeeeceEEE
Confidence 46899 9998776644 669999 999999988865
No 13
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=92.79 E-value=0.047 Score=30.99 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=21.0
Q ss_pred EEEcCcCCcceecCCCC---------CeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRPRD---------PIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d---------~IRC~~CG~R 43 (73)
.|+|..||-..+...++ .-+||.||..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCc
Confidence 59999999998764433 3599999974
No 14
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=92.00 E-value=0.12 Score=32.41 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=27.1
Q ss_pred ceeccccCCcceEEEcCcCCcceecCCC----------------CCeecCCCCC
Q psy2244 5 QVLVGKCLPGDIEKYYLECHFENEIRPR----------------DPIRCRECGY 42 (73)
Q Consensus 5 ~~l~~~~~~~~v~YiC~~Cg~e~~ik~~----------------d~IRC~~CG~ 42 (73)
.||-.....+...|+|..||-..+...+ +.-+||.||.
T Consensus 15 ~~~g~~~~~em~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 68 (81)
T 2kn9_A 15 QTQGPGSMNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGA 68 (81)
T ss_dssp CCCCCCCSSCCCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCC
T ss_pred cccCCcCCCCcceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCC
Confidence 3555445555678999999999876432 3348999998
No 15
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=91.75 E-value=0.08 Score=36.28 Aligned_cols=28 Identities=18% Similarity=0.322 Sum_probs=21.0
Q ss_pred ceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 15 DIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
...|+|..||...+-+. .|-.||.||+.
T Consensus 153 ~~~~~C~~CG~~~~g~~-~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHEGTG-APELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEEEEE-CCSBCTTTCCB
T ss_pred CceEEECCCCCEeeCCC-CCCCCCCCcCC
Confidence 35899999999977432 22399999983
No 16
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=90.36 E-value=0.19 Score=34.92 Aligned_cols=28 Identities=18% Similarity=0.205 Sum_probs=22.6
Q ss_pred cceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 14 GDIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
....|+|..||...+- ..|-.||.||+.
T Consensus 168 ~~~~~~C~~CG~i~~g--~~p~~CP~C~~~ 195 (202)
T 1yuz_A 168 DDKFHLCPICGYIHKG--EDFEKCPICFRP 195 (202)
T ss_dssp SCCEEECSSSCCEEES--SCCSBCTTTCCB
T ss_pred CCcEEEECCCCCEEcC--cCCCCCCCCCCC
Confidence 3468999999999773 456899999983
No 17
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=90.00 E-value=0.18 Score=29.12 Aligned_cols=38 Identities=18% Similarity=0.338 Sum_probs=28.3
Q ss_pred CCcceEEEcCcCCcceec-CCCCCeecCCCCCeEEEeee
Q psy2244 12 LPGDIEKYYLECHFENEI-RPRDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~i-k~~d~IRC~~CG~RILyKkR 49 (73)
..+.....|.+||...-+ ...+...|..||+-.++|+.
T Consensus 13 ki~~~~~fCPkCG~~~~ma~~~dr~~C~kCgyt~~~~~~ 51 (55)
T 2k4x_A 13 KLVRKHRFCPRCGPGVFLAEHADRYSCGRCGYTEFKKAK 51 (55)
T ss_dssp CCCCSSCCCTTTTTTCCCEECSSEEECTTTCCCEECCCC
T ss_pred EEEEccccCcCCCCceeEeccCCEEECCCCCCEEEeCcc
Confidence 344556899999986543 34588999999998877654
No 18
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=89.24 E-value=0.21 Score=30.28 Aligned_cols=27 Identities=19% Similarity=0.287 Sum_probs=20.9
Q ss_pred eEEEcCcCCcceecCCC----------------CCeecCCCCC
Q psy2244 16 IEKYYLECHFENEIRPR----------------DPIRCRECGY 42 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~----------------d~IRC~~CG~ 42 (73)
..|+|..||-.-+...+ +.-+||.||.
T Consensus 6 ~~y~C~vCGyiYd~~~Gdp~~gi~pGT~f~~lPddw~CP~Cga 48 (70)
T 1dx8_A 6 GKYECEACGYIYEPEKGDKFAGIPPGTPFVDLSDSFMCPACRS 48 (70)
T ss_dssp SCEEETTTCCEECTTTCCTTTTCCSSCCGGGSCTTCBCTTTCC
T ss_pred ceEEeCCCCEEEcCCCCCcccCcCCCCchhhCCCCCcCCCCCC
Confidence 36999999998875432 3348999998
No 19
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=88.97 E-value=0.15 Score=27.95 Aligned_cols=26 Identities=35% Similarity=0.652 Sum_probs=19.4
Q ss_pred EEEcCcCCc-ceecC-CCCCeecCCCCC
Q psy2244 17 EKYYLECHF-ENEIR-PRDPIRCRECGY 42 (73)
Q Consensus 17 ~YiC~~Cg~-e~~ik-~~d~IRC~~CG~ 42 (73)
.+.|..||. ++..+ ....+.|++||.
T Consensus 5 ~~~CP~C~~~~l~~d~~~gelvC~~CG~ 32 (50)
T 1pft_A 5 QKVCPACESAELIYDPERGEIVCAKCGY 32 (50)
T ss_dssp CCSCTTTSCCCEEEETTTTEEEESSSCC
T ss_pred cEeCcCCCCcceEEcCCCCeEECcccCC
Confidence 467999988 55554 346699999997
No 20
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=88.27 E-value=0.21 Score=31.39 Aligned_cols=51 Identities=14% Similarity=0.266 Sum_probs=31.9
Q ss_pred cccCCcc-eEEEcCcCCcceecCCCCCeecCCCCCeEEEeeeCCeeEEEeeccCCCC
Q psy2244 9 GKCLPGD-IEKYYLECHFENEIRPRDPIRCRECGYRIMYKKRTKRCILYFKPQTGGF 64 (73)
Q Consensus 9 ~~~~~~~-v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKkRt~r~vqf~~~~~~~~ 64 (73)
..++.+. ..|.|..|++++... ..||+||..+-- -..=..+.|+=++++|.
T Consensus 9 ~~~l~~~~~~~~C~~C~~~~~~~----afCPeCgq~Le~-lkACGA~~yFC~~C~~L 60 (81)
T 2jrp_A 9 HHALERNGDTAHCETCAKDFSLQ----ALCPDCRQPLQV-LKACGAVDYFCQNGHGL 60 (81)
T ss_dssp CSCCEECSSEEECTTTCCEEEEE----EECSSSCSCCCE-EEETTEEEECCTTTTCC
T ss_pred CCccccCCCceECccccccCCCc----ccCcchhhHHHH-HHhcCCcCeeeccCCCE
Confidence 3444444 356699999987766 389999987633 11223346666666665
No 21
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=88.02 E-value=0.087 Score=32.59 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=24.5
Q ss_pred cCCcceEEEcCcCCcceecCCCCCe-ecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIRPRDPI-RCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~~d~I-RC~~CG~RI 44 (73)
++.+...|.|..||++.--+....| .|..||..+
T Consensus 20 e~~q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~ 54 (72)
T 3jyw_9 20 EIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTV 54 (72)
T ss_dssp HHHHHSCBCCSSCCSSCBSBCSSSCBCCSSSCCCC
T ss_pred HHHhccCccCCCCCCceeEecCCCeEECCCCCCEE
Confidence 4455678999999988544444455 999999754
No 22
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=87.81 E-value=0.88 Score=27.37 Aligned_cols=42 Identities=17% Similarity=0.225 Sum_probs=27.5
Q ss_pred ceeccccCCcc-eEEEcCcCCcceecCCC-CCeecCCCCCeEEE
Q psy2244 5 QVLVGKCLPGD-IEKYYLECHFENEIRPR-DPIRCRECGYRIMY 46 (73)
Q Consensus 5 ~~l~~~~~~~~-v~YiC~~Cg~e~~ik~~-d~IRC~~CG~RILy 46 (73)
++|.-..+... -.+-|.+|+..+..... ..+.|+.||+..=+
T Consensus 12 ~~l~e~~v~~~~~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~ 55 (86)
T 2ct7_A 12 KKLTEGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCV 55 (86)
T ss_dssp SCCCCSCCCSCCCEECCSSSCCCEECCCSCSCEECTTTCCEECS
T ss_pred HHHHHHHHhcCCCEeECcCCCchheecCCCCceEeCCCCCcccc
Confidence 45555555433 34459999987755543 45899999987544
No 23
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=87.81 E-value=0.34 Score=28.02 Aligned_cols=27 Identities=19% Similarity=0.359 Sum_probs=20.8
Q ss_pred EEEcCcCCcceecCCC----------------CCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRPR----------------DPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~----------------d~IRC~~CG~R 43 (73)
.|+|..||-..+...+ +.-+||.||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cga~ 45 (55)
T 2v3b_B 3 KWQCVVCGFIYDEALGLPEEGIPAGTRWEDIPADWVCPDCGVG 45 (55)
T ss_dssp EEEETTTCCEEETTTCBTTTTBCTTCCGGGSCTTCCCTTTCCC
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 5999999998876542 33489999984
No 24
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=87.08 E-value=0.38 Score=27.51 Aligned_cols=27 Identities=22% Similarity=0.393 Sum_probs=20.6
Q ss_pred EEEcCcCCcceecCCCC----------------CeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRPRD----------------PIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d----------------~IRC~~CG~R 43 (73)
.|+|..||-.-+...++ .-+||.||..
T Consensus 3 ~y~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 45 (52)
T 1e8j_A 3 IYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGAS 45 (52)
T ss_dssp CEECSSSCCCCCTTTCCTTTTCCSSCCTTSSCTTCCCSSSCCC
T ss_pred cEEeCCCCeEEcCCcCCcccCcCCCCchHHCCCCCcCCCCCCc
Confidence 59999999988765433 2389999973
No 25
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=86.98 E-value=0.51 Score=26.96 Aligned_cols=27 Identities=19% Similarity=0.300 Sum_probs=20.8
Q ss_pred EEEcCcCCcceecCCC----------------CCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRPR----------------DPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~----------------d~IRC~~CG~R 43 (73)
.|+|..||-.-+...+ +.-+||.||..
T Consensus 2 ~~~C~~CGyvYd~~~Gdp~~gi~pGt~f~~lP~dw~CP~Cg~~ 44 (52)
T 1yk4_A 2 KLSCKICGYIYDEDEGDPDNGISPGTKFEDLPDDWVCPLCGAP 44 (52)
T ss_dssp EEEESSSSCEEETTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred cEEeCCCCeEECCCcCCcccCcCCCCCHhHCCCCCcCCCCCCC
Confidence 5999999998876432 33489999973
No 26
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=86.19 E-value=0.38 Score=24.57 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=20.4
Q ss_pred eEEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
..|.|..|+..+... ...+..|+.||...
T Consensus 3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 42 (57)
T 3uk3_C 3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAA 42 (57)
T ss_dssp --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEE
T ss_pred CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchh
Confidence 468999999886533 24578999999753
No 27
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=86.04 E-value=0.43 Score=34.01 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=23.4
Q ss_pred cceEEEcCcCCcceecC-----CCCCeecCCCCCeE
Q psy2244 14 GDIEKYYLECHFENEIR-----PRDPIRCRECGYRI 44 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik-----~~d~IRC~~CG~RI 44 (73)
....|.|..||.+..+. ...+..||.|+.+=
T Consensus 131 ~~~~f~C~~C~~~~~v~~~~~~~~~P~~Cp~C~~~~ 166 (279)
T 1ltl_A 131 VKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGRS 166 (279)
T ss_dssp EEEEEEETTTCCEEEEECSSSSCCCCSCCTTTCCCC
T ss_pred EEEEEEcCCCCCEEEEEecCCcccCCCcCCCCCCCC
Confidence 34679999999886544 24568999999874
No 28
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=85.96 E-value=0.37 Score=27.31 Aligned_cols=28 Identities=25% Similarity=0.496 Sum_probs=18.9
Q ss_pred eEEEcCcCCcce-ecCCCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFEN-EIRPRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~-~ik~~d~IRC~~CG~R 43 (73)
..=-|.+||..+ .....+..+|+.||+-
T Consensus 18 ~~k~CP~CG~~~fm~~~~~R~~C~kCG~t 46 (50)
T 3j20_Y 18 KNKFCPRCGPGVFMADHGDRWACGKCGYT 46 (50)
T ss_dssp SSEECSSSCSSCEEEECSSEEECSSSCCE
T ss_pred ecccCCCCCCceEEecCCCeEECCCCCCE
Confidence 334588888753 3335577889999874
No 29
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=85.79 E-value=0.74 Score=24.66 Aligned_cols=32 Identities=16% Similarity=0.524 Sum_probs=23.3
Q ss_pred CcceEEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 13 PGDIEKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
.+...|.|..|+..+... ...+..|+.|+...
T Consensus 5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f 47 (70)
T 1x5w_A 5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDT 47 (70)
T ss_dssp CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEE
T ss_pred CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCcc
Confidence 344569999999886532 23568999999864
No 30
>3m7n_A Putative uncharacterized protein AF_0206; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_A 3m85_A
Probab=85.73 E-value=0.57 Score=31.64 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=25.3
Q ss_pred CcceEEEcCcCCcceecCCCCCeecCCCCCeEE
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCRECGYRIM 45 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RIL 45 (73)
.+.+.-.|.+||....... +.++||+||..-.
T Consensus 136 lGvv~a~~~~~g~~m~~~~-~~~~cp~~g~~e~ 167 (179)
T 3m7n_A 136 MGVLRALCSNCKTEMVREG-DILKCPECGRVEK 167 (179)
T ss_dssp CEEEECBCTTTCCBCEECS-SSEECSSSCCEEC
T ss_pred CCEEEecccccCCceEECC-CEEECCCCCCEEE
Confidence 4567778999999876655 8899999998643
No 31
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=85.66 E-value=0.46 Score=30.11 Aligned_cols=27 Identities=19% Similarity=0.411 Sum_probs=20.8
Q ss_pred eEEEcCcCCcceecCCC----------------CCeecCCCCC
Q psy2244 16 IEKYYLECHFENEIRPR----------------DPIRCRECGY 42 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~----------------d~IRC~~CG~ 42 (73)
..|+|..||-..+...+ +.-+||.||.
T Consensus 34 ~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga 76 (87)
T 1s24_A 34 LKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGA 76 (87)
T ss_dssp CEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCC
T ss_pred ceEECCCCCeEecCCcCCcccCcCCCCChhHCCCCCCCCCCCC
Confidence 47999999988775432 3348999997
No 32
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=85.54 E-value=0.27 Score=24.36 Aligned_cols=27 Identities=7% Similarity=-0.026 Sum_probs=19.4
Q ss_pred ceEEEcCcCCcceecC-----------CCCCeecCCCC
Q psy2244 15 DIEKYYLECHFENEIR-----------PRDPIRCRECG 41 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG 41 (73)
...|.|..|++.+..+ ...+..|+.||
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg 45 (45)
T 2epq_A 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG 45 (45)
T ss_dssp CCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred CCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence 3469999999886532 23567888887
No 33
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=85.31 E-value=0.65 Score=26.00 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=22.4
Q ss_pred eEEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
-.|.|..||+.+... ...+-.|+.||..-
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F 42 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCF 42 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEE
T ss_pred CCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCc
Confidence 359999999998644 23678999999754
No 34
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=84.97 E-value=0.13 Score=32.49 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=24.0
Q ss_pred cCCcceEEEcCcCCcceecCCCCCe-ecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIRPRDPI-RCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~~d~I-RC~~CG~RI 44 (73)
++.+...|.|..||++.--+....| .|..||.-+
T Consensus 29 e~~q~~ky~CpfCGk~~vkR~a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 29 EAKMRQKHTCPVCGRKAVKRISTGIWQCQKCGATF 63 (83)
T ss_dssp HHHHHSCBCCSSSCSSCEEEEETTEEEETTTCCEE
T ss_pred HHHhhcccCCCCCCCceeEecCcCeEEcCCCCCEE
Confidence 3445568999999998433334444 999999864
No 35
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=84.87 E-value=0.62 Score=31.55 Aligned_cols=28 Identities=18% Similarity=0.331 Sum_probs=25.1
Q ss_pred EEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
.=.|+.|+..+.+-.+....|.+|.++|
T Consensus 68 ~~~C~~C~~~fg~l~~~g~~C~~C~~~V 95 (153)
T 2zet_C 68 ETHCARCLQPYRLLLNSRRQCLECSLFV 95 (153)
T ss_dssp GTBCTTTCCBGGGCSSCCEECTTTCCEE
T ss_pred CccchhhcCccccccCCCCcCCCCCchh
Confidence 4579999999988888899999999987
No 36
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=84.77 E-value=0.36 Score=33.27 Aligned_cols=27 Identities=19% Similarity=0.322 Sum_probs=24.1
Q ss_pred EEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
-.|.+|+.+..-..++..-||+|+|--
T Consensus 28 P~CP~C~seytYeDg~l~vCPeC~hEW 54 (138)
T 2akl_A 28 PPCPQCNSEYTYEDGALLVCPECAHEW 54 (138)
T ss_dssp CCCTTTCCCCCEECSSSEEETTTTEEE
T ss_pred CCCCCCCCcceEecCCeEECCcccccc
Confidence 569999999999999999999999953
No 37
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=84.62 E-value=0.75 Score=24.74 Aligned_cols=31 Identities=13% Similarity=0.095 Sum_probs=22.4
Q ss_pred ceEEEcCcCCcceecC--------CCCCeecCCCCCeEE
Q psy2244 15 DIEKYYLECHFENEIR--------PRDPIRCRECGYRIM 45 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik--------~~d~IRC~~CG~RIL 45 (73)
...|.|..||..+... ...+..|+.||....
T Consensus 12 ~k~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 12 RASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVE 50 (62)
T ss_dssp SSEEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCE
T ss_pred CCCccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccc
Confidence 4569999999875422 235689999998643
No 38
>2k2d_A Ring finger and CHY zinc finger domain- containing protein 1; zinc-binding protein, cytoplasm, metal-binding, nucleus, metal binding protein; NMR {Homo sapiens}
Probab=84.57 E-value=0.72 Score=28.25 Aligned_cols=28 Identities=11% Similarity=0.395 Sum_probs=22.4
Q ss_pred ceEEEcCcCCcceecCCCC-CeecCCCCC
Q psy2244 15 DIEKYYLECHFENEIRPRD-PIRCRECGY 42 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d-~IRC~~CG~ 42 (73)
++.-.|.+|++.......- ..+|+.||.
T Consensus 35 ~v~I~CnDC~~~s~v~~h~lg~kC~~C~S 63 (79)
T 2k2d_A 35 TVDILCNDCNGRSTVQFHILGMKCKICES 63 (79)
T ss_dssp EEEEEESSSCCEEEEECCTTCCCCTTTSC
T ss_pred EeEEECCCCCCCccCCceeecccCcCCCC
Confidence 4678999999998887532 359999997
No 39
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=84.18 E-value=0.18 Score=33.17 Aligned_cols=34 Identities=18% Similarity=0.175 Sum_probs=24.5
Q ss_pred cCCcceEEEcCcCCcceecCCCCCe-ecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIRPRDPI-RCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~~d~I-RC~~CG~RI 44 (73)
++.+...|.|..||++.--+....| .|..||.-+
T Consensus 30 E~~q~aky~CpfCgk~~vKR~a~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 30 EITQHAKYGCPFCGKVAVKRAAVGIWKCKPCKKII 64 (103)
T ss_dssp HHHHHSCEECTTTCCEEEEEEETTEEEETTTTEEE
T ss_pred HHHhhcCCCCCCCCCceeeecCcceEEcCCCCCEE
Confidence 3445678999999988544444455 999999754
No 40
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=83.84 E-value=0.65 Score=26.95 Aligned_cols=27 Identities=19% Similarity=0.340 Sum_probs=20.3
Q ss_pred EEEcCcCCcceecCCC----------------CCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRPR----------------DPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~----------------d~IRC~~CG~R 43 (73)
.|+|..||-.-+...+ +.-+||.||..
T Consensus 3 ~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 3 KYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVG 45 (54)
T ss_dssp CEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred ceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCc
Confidence 5999999988765433 33499999974
No 41
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=83.60 E-value=0.16 Score=32.76 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=24.2
Q ss_pred cCCcceEEEcCcCCcceecCCCCCe-ecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIRPRDPI-RCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~~d~I-RC~~CG~RI 44 (73)
++.+...|.|..||++.--+....| .|..||.-+
T Consensus 30 e~~q~~ky~CpfCgk~~vkR~a~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 30 EVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVK 64 (92)
T ss_dssp HHHHHSCBCCTTTCSSCBEEEETTEEECSSSCCEE
T ss_pred HHHHhccccCcccCCCeeEecCcceEEcCCCCCEE
Confidence 3445678999999998433334445 999999854
No 42
>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7
Probab=83.57 E-value=0.62 Score=27.71 Aligned_cols=27 Identities=30% Similarity=0.600 Sum_probs=22.3
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCCeEE
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGYRIM 45 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~RIL 45 (73)
...||-.|++.+.++ +.+|+.|||.=|
T Consensus 18 ~k~ICrkC~ARnp~~---A~~CRKCg~~~L 44 (56)
T 2ayj_A 18 LKKVCRKCGALNPIR---ATKCRRCHSTNL 44 (56)
T ss_dssp CCEEETTTCCEECTT---CSSCTTTCCCCE
T ss_pred chhhhccccCcCCcc---cccccCCCCCCC
Confidence 357999999999776 588999999744
No 43
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=83.36 E-value=0.72 Score=24.98 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=24.5
Q ss_pred cCCcceEEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
.......|.|..|++.+..+ ...+..|+.||...
T Consensus 11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f 55 (74)
T 2lce_A 11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQF 55 (74)
T ss_dssp CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEE
T ss_pred ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchh
Confidence 34455679999999887533 23568999999753
No 44
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=83.00 E-value=0.17 Score=32.61 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=24.1
Q ss_pred cCCcceEEEcCcCCcceecCCCCCe-ecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIRPRDPI-RCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~~d~I-RC~~CG~RI 44 (73)
++.+...|.|..||++.--+....| .|..||.-+
T Consensus 30 e~~q~~ky~CpfCgk~~vkR~a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 30 EIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKKTV 64 (92)
T ss_dssp HHHHHSCCCCSSSCSSCCEEEETTEEECTTTCCEE
T ss_pred HHHHhcCCcCCCCCCceeeecccceEEcCCCCCEE
Confidence 3445578999999988433334445 999999754
No 45
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=82.99 E-value=0.63 Score=23.70 Aligned_cols=27 Identities=19% Similarity=0.468 Sum_probs=19.1
Q ss_pred EEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 18 KYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 18 YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
|.|..|+..+... ...+..|+.||...
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 39 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSF 39 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEE
T ss_pred CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchh
Confidence 7888898876432 23568899998753
No 46
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=82.33 E-value=0.89 Score=30.11 Aligned_cols=29 Identities=10% Similarity=0.257 Sum_probs=23.9
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
..-.|+.|+.++.+-.+....|.+|.++|
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~V 82 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNV 82 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEE
T ss_pred CCccccccCCCcccccCCCCCCCCCCccc
Confidence 45679999999977667779999999876
No 47
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=82.16 E-value=0.73 Score=23.78 Aligned_cols=28 Identities=14% Similarity=0.225 Sum_probs=19.9
Q ss_pred EEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
.|.|..|+..+... ...+..|+.||...
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 40 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAF 40 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEE
T ss_pred cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCcc
Confidence 37899998876532 23568999999753
No 48
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=81.91 E-value=0.83 Score=22.92 Aligned_cols=31 Identities=6% Similarity=-0.215 Sum_probs=21.4
Q ss_pred CCcceEEEcCcCCcceecC-----------CCCCeecCCCCC
Q psy2244 12 LPGDIEKYYLECHFENEIR-----------PRDPIRCRECGY 42 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~ 42 (73)
-.....|.|..|+..+.-. ...+..|+.||.
T Consensus 7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k 48 (48)
T 2epr_A 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG 48 (48)
T ss_dssp CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence 3445679999999886532 234678999873
No 49
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=81.78 E-value=1.2 Score=24.02 Aligned_cols=31 Identities=26% Similarity=0.485 Sum_probs=23.0
Q ss_pred cceEEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 14 GDIEKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
+...|.|..|+..+... ...+.+|+.|+...
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f 52 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAF 52 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEE
T ss_pred CCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCccc
Confidence 34569999999886532 24679999999754
No 50
>1dxg_A Desulforedoxin; non-heme iron protein, rubredoxin type metal center, electron transport; 1.80A {Desulfovibrio gigas} SCOP: g.41.5.2 PDB: 1dcd_A 1dhg_A 1cfw_A 2lk5_A 2lk6_A
Probab=81.29 E-value=1.1 Score=23.51 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=18.6
Q ss_pred eEEEcCcCCcceec--CCCCCeecCCCCC
Q psy2244 16 IEKYYLECHFENEI--RPRDPIRCRECGY 42 (73)
Q Consensus 16 v~YiC~~Cg~e~~i--k~~d~IRC~~CG~ 42 (73)
..|+|..||..++. ....++.| ||-
T Consensus 5 ~fY~C~~CGnivev~~~g~~~l~C--CG~ 31 (36)
T 1dxg_A 5 DVYKCELCGQVVKVLEEGGGTLVC--CGE 31 (36)
T ss_dssp CEEECTTTCCEEEEEECCSSCEEE--TTE
T ss_pred cEEEcCCCCcEEEEEeCCCcCEEe--CCc
Confidence 46999999999887 55566776 553
No 51
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=79.80 E-value=0.61 Score=30.67 Aligned_cols=24 Identities=17% Similarity=0.343 Sum_probs=14.0
Q ss_pred EEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
.|.|..|+.++... ..||+|+..+
T Consensus 48 ~~hC~~C~~~f~~~----a~CPdC~q~L 71 (101)
T 2jne_A 48 HARCRSCGEFIEMK----ALCPDCHQPL 71 (101)
T ss_dssp EEEETTTCCEEEEE----EECTTTCSBC
T ss_pred EEECccccchhhcc----ccCcchhhHH
Confidence 34466666655544 5677776643
No 52
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=79.61 E-value=0.53 Score=28.96 Aligned_cols=34 Identities=24% Similarity=0.427 Sum_probs=24.9
Q ss_pred cCCcceEEEcCcCCcceecC-CCCCeecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIR-PRDPIRCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik-~~d~IRC~~CG~RI 44 (73)
++.+...|.|..||.+.-.+ ....-.|..||..+
T Consensus 21 e~~q~~ky~C~fCgk~~vkR~a~GIW~C~~C~~~~ 55 (73)
T 1ffk_W 21 EIKHKKKYKCPVCGFPKLKRASTSIWVCGHCGYKI 55 (73)
T ss_pred HHhcccCccCCCCCCceeEEEEeEEEECCCCCcEE
Confidence 45677889999999863333 34557899999754
No 53
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=79.37 E-value=1.3 Score=26.32 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=22.4
Q ss_pred eEEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
-.|+|..||+.+.-+ ...+..|+.||..-
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F 66 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATF 66 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEE
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEe
Confidence 349999999997644 23678999999753
No 54
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=79.26 E-value=1.4 Score=30.90 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=23.2
Q ss_pred cceEEEc--CcCCcceecC--------CCCCeecCCCCCe
Q psy2244 14 GDIEKYY--LECHFENEIR--------PRDPIRCRECGYR 43 (73)
Q Consensus 14 ~~v~YiC--~~Cg~e~~ik--------~~d~IRC~~CG~R 43 (73)
....|.| ..||.++... ...+..||.|+.+
T Consensus 138 ~~~~f~C~~~~C~~~~~~~~~~~~~~~~~~P~~Cp~C~~~ 177 (268)
T 2vl6_A 138 YKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKP 177 (268)
T ss_dssp EECEEEEECTTCCCEEESSTTSCCCTTCCCCSBCTTTCCB
T ss_pred EEEEEECCCCCCCCEEeeeecccCCCcccCCccCCCCCCC
Confidence 3467999 9999887655 2366889999985
No 55
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=78.69 E-value=0.51 Score=31.49 Aligned_cols=33 Identities=12% Similarity=0.265 Sum_probs=23.8
Q ss_pred CCcceEEEcCcCCccee-cCCCCCeecCCCCCeE
Q psy2244 12 LPGDIEKYYLECHFENE-IRPRDPIRCRECGYRI 44 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~-ik~~d~IRC~~CG~RI 44 (73)
..+...|.|..||.+.- -.....-.|+.||+-+
T Consensus 55 ~~q~akytCPfCGk~~vKR~avGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 55 SEMNEDHACPNCGEDRVDRQGTGIWQCSYCDYKF 88 (116)
T ss_dssp HHHHSCEECSSSCCEEEEEEETTEEEETTTCCEE
T ss_pred HHhccCCcCCCCCCceeEecCceeEECCCCCCEE
Confidence 45567899999998532 2244668999999854
No 56
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=78.64 E-value=2.8 Score=23.36 Aligned_cols=28 Identities=21% Similarity=0.571 Sum_probs=15.9
Q ss_pred eEEEcCcCCccee------cC-CCCC----eecCCCCCe
Q psy2244 16 IEKYYLECHFENE------IR-PRDP----IRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~------ik-~~d~----IRC~~CG~R 43 (73)
....|.+||...- ++ ..++ ..|.+|||+
T Consensus 14 ~~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~ 52 (57)
T 1qyp_A 14 TKITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHT 52 (57)
T ss_dssp EECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCE
T ss_pred eEeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCE
Confidence 3556888876421 21 1222 578888876
No 57
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=77.59 E-value=1.6 Score=24.61 Aligned_cols=26 Identities=35% Similarity=0.753 Sum_probs=14.6
Q ss_pred EEcCcCCcce------ecCCC-CC----eecCCCCCe
Q psy2244 18 KYYLECHFEN------EIRPR-DP----IRCRECGYR 43 (73)
Q Consensus 18 YiC~~Cg~e~------~ik~~-d~----IRC~~CG~R 43 (73)
..|.+||... .++.. ++ ..|.+||||
T Consensus 10 ~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~ 46 (50)
T 1tfi_A 10 FTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNR 46 (50)
T ss_dssp SCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCE
T ss_pred cCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCe
Confidence 4677776652 12222 22 578888876
No 58
>2kwq_A Protein MCM10 homolog; DNA replication, DNA binding, zinc motif, zinc ribbon binding protein; NMR {Xenopus laevis}
Probab=77.53 E-value=1.5 Score=27.90 Aligned_cols=26 Identities=15% Similarity=0.199 Sum_probs=20.0
Q ss_pred EEEcCcCCcc-eecCCCCCeecCCCCCe
Q psy2244 17 EKYYLECHFE-NEIRPRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e-~~ik~~d~IRC~~CG~R 43 (73)
-++|+ |+.. +.+...+...|++||.-
T Consensus 48 FFkC~-C~~Rt~sl~r~P~~~C~~Cg~~ 74 (92)
T 2kwq_A 48 FFKCP-CGNRTISLDRLPKKHCSTCGLF 74 (92)
T ss_dssp EEECT-TSCEEEESSSSCCSCCTTTCSC
T ss_pred EEECC-CCCceeEeeeCCCCCCCCCCCC
Confidence 47897 8766 56777788899999974
No 59
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=76.49 E-value=4.9 Score=24.19 Aligned_cols=34 Identities=21% Similarity=0.407 Sum_probs=25.3
Q ss_pred ccCCcceEEEcCcCCcceec--CCCCCeecCCCCCe
Q psy2244 10 KCLPGDIEKYYLECHFENEI--RPRDPIRCRECGYR 43 (73)
Q Consensus 10 ~~~~~~v~YiC~~Cg~e~~i--k~~d~IRC~~CG~R 43 (73)
++.+.=|.=+|.+|+.+..+ .....|.|..||.-
T Consensus 8 ~PnS~Fm~VkCp~C~~~q~VFSha~t~V~C~~Cgt~ 43 (63)
T 3j20_W 8 MPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGAT 43 (63)
T ss_dssp CCSCCEEEEECSSSCCEEEEESSCSSCEECSSSCCE
T ss_pred CCCCcEEEEECCCCCCeeEEEecCCeEEEccCcCCE
Confidence 33344488899999998543 46688999999964
No 60
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=76.01 E-value=2.9 Score=23.10 Aligned_cols=12 Identities=8% Similarity=-0.255 Sum_probs=6.4
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
.|.|..|+..+.
T Consensus 7 ~~~C~~C~~~f~ 18 (95)
T 2yt9_A 7 GVACEICGKIFR 18 (95)
T ss_dssp CEECSSSCCEES
T ss_pred CeECCCCCCccC
Confidence 355555655543
No 61
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.21 E-value=1.5 Score=27.29 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=26.9
Q ss_pred cceEEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 14 GDIEKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
+..+=.|+.|+..+.+-......|+.|.+||
T Consensus 22 ~~~~r~CarC~~~LG~l~~~g~~C~~Ck~rV 52 (76)
T 2csz_A 22 HYSDRTCARCQESLGRLSPKTNTCRGCNHLV 52 (76)
T ss_dssp TCCCCBCSSSCCBCSSSCTTTSEETTTTEEC
T ss_pred CCCccchhhhCccccccccCCCcCcccChhh
Confidence 4556689999999998888999999999976
No 62
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.20 E-value=1 Score=25.61 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=23.1
Q ss_pred eEEEcCcCCcceecC---------CCCCeecCCCCCeEE
Q psy2244 16 IEKYYLECHFENEIR---------PRDPIRCRECGYRIM 45 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik---------~~d~IRC~~CG~RIL 45 (73)
-.|.|..|+..+... +..++.|++||..+.
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~~~c~~~~~~C~~C~~~~~ 54 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHEDYCGARTELCGNCGRNVL 54 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHHHHHHHCEEECSSSCCEEE
T ss_pred cccCCcccChHhhHHHHHHHHhHcCCCceEcccCCCcCc
Confidence 569999999987533 247799999998643
No 63
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=74.59 E-value=2.2 Score=26.43 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=24.1
Q ss_pred ceEEEcCcCCcceecCCCCCeecCCCCCeEEEee
Q psy2244 15 DIEKYYLECHFENEIRPRDPIRCRECGYRIMYKK 48 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKk 48 (73)
.-.++|-.|-+.. +..+..-||.||+.-|.|.
T Consensus 13 ~~iLrC~aCf~~t--~~~~k~FCp~CGn~TL~Rv 44 (79)
T 2con_A 13 SYILRCHGCFKTT--SDMNRVFCGHCGNKTLKKV 44 (79)
T ss_dssp CEEEECSSSCCEE--SCSSCCSCSSSCCSCCEEE
T ss_pred eeeeEecccceEC--CCcccccccccCcccceEE
Confidence 3567899997765 4456788999999877653
No 64
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=74.57 E-value=2.4 Score=23.51 Aligned_cols=27 Identities=19% Similarity=0.326 Sum_probs=20.0
Q ss_pred EEEcCcCCcceecC-----------CCCCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIR-----------PRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~R 43 (73)
.|.|..|+..+..+ ...+..|+.||..
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~ 40 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 40 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCc
Confidence 48999999887533 2356899999864
No 65
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=74.36 E-value=2.6 Score=22.51 Aligned_cols=28 Identities=18% Similarity=0.315 Sum_probs=17.9
Q ss_pred eEEEcCcCCcceecC-----------CCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENEIR-----------PRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~R 43 (73)
..|.|..|+..+..+ ...+..|+.||..
T Consensus 28 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 66 (82)
T 2kmk_A 28 RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKA 66 (82)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCE
T ss_pred CCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchh
Confidence 347788887765432 2356778888764
No 66
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=73.87 E-value=2.6 Score=21.63 Aligned_cols=31 Identities=10% Similarity=0.026 Sum_probs=21.5
Q ss_pred CcceEEEcCcCCcceecC------------CCCCeecCCCCCe
Q psy2244 13 PGDIEKYYLECHFENEIR------------PRDPIRCRECGYR 43 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik------------~~d~IRC~~CG~R 43 (73)
.....|.|..|+..+.-. ...+..|+.||..
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~ 50 (54)
T 2eps_A 8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG 50 (54)
T ss_dssp CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCS
T ss_pred CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCC
Confidence 445669999999876421 2356789999864
No 67
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=73.41 E-value=4.7 Score=24.54 Aligned_cols=28 Identities=21% Similarity=0.530 Sum_probs=22.1
Q ss_pred eEEEcCcCCccee--cCCCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENE--IRPRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~--ik~~d~IRC~~CG~R 43 (73)
|.=+|.+|+.+.. ......|+|..||.-
T Consensus 6 m~VKCp~C~niq~VFShA~tvV~C~~Cg~~ 35 (66)
T 1qxf_A 6 VKVKCPDCEHEQVIFDHPSTIVKCIICGRT 35 (66)
T ss_dssp EEEECTTTCCEEEEESSCSSCEECSSSCCE
T ss_pred EEEECCCCCCceEEEecCceEEEcccCCCE
Confidence 5678999998854 346788999999964
No 68
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.28 E-value=2.1 Score=23.17 Aligned_cols=30 Identities=20% Similarity=0.325 Sum_probs=22.3
Q ss_pred ceEEEcCcCCcceecC--------------CCCCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEIR--------------PRDPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik--------------~~d~IRC~~CG~RI 44 (73)
...|.|..|++.+..+ ...+..|+.||..-
T Consensus 5 ~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f 48 (78)
T 2d9h_A 5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRF 48 (78)
T ss_dssp CCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEE
T ss_pred CcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchh
Confidence 4569999999887532 13578999999754
No 69
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=73.08 E-value=2.9 Score=21.79 Aligned_cols=30 Identities=13% Similarity=0.066 Sum_probs=21.8
Q ss_pred ceEEEcCcCCcceec-------------CCCCCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEI-------------RPRDPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i-------------k~~d~IRC~~CG~RI 44 (73)
...|.|..|+..+.. ....+..|+.||...
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f 50 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEF 50 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEE
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCcc
Confidence 356999999988642 133568999999753
No 70
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=72.80 E-value=2.4 Score=25.67 Aligned_cols=31 Identities=19% Similarity=0.496 Sum_probs=24.2
Q ss_pred cceEEEcCcCCcceecC---CCCCeecCCCCCeE
Q psy2244 14 GDIEKYYLECHFENEIR---PRDPIRCRECGYRI 44 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik---~~d~IRC~~CG~RI 44 (73)
+.+.+.|..|++.+++. ..+.-.|..||..+
T Consensus 2 ~~~~~~c~~c~~~n~~p~~~~~~~~~~~~~~~~~ 35 (148)
T 3p2a_A 2 NAMNTVCTACMATNRLPEERIDDGAKCGRCGHSL 35 (148)
T ss_dssp CEEEEECTTTCCEEEEESSCSCSCCBCTTTCCBT
T ss_pred CccEEECcccccccCCCCcccccCCcchhcCCcc
Confidence 35688999999998766 34667799999854
No 71
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=72.67 E-value=2.8 Score=26.21 Aligned_cols=29 Identities=14% Similarity=0.163 Sum_probs=16.5
Q ss_pred ceEEEcCcCCcceecC-----------CCCCeecCCCCCe
Q psy2244 15 DIEKYYLECHFENEIR-----------PRDPIRCRECGYR 43 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~R 43 (73)
...|.|..||..+... ...+-.|+.||..
T Consensus 20 ek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~ 59 (133)
T 2lt7_A 20 RVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKV 59 (133)
T ss_dssp EEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCE
T ss_pred CcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCee
Confidence 4557777777665433 1234667777653
No 72
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=72.51 E-value=2.1 Score=26.85 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=14.5
Q ss_pred CCCCeecCCCCCeEEEee
Q psy2244 31 PRDPIRCRECGYRIMYKK 48 (73)
Q Consensus 31 ~~d~IRC~~CG~RILyKk 48 (73)
....+.|+|||-+-.+|.
T Consensus 50 ~~g~~~CpYCg~~f~l~~ 67 (80)
T 2jvm_A 50 ETGFVECGYCDRRYIHES 67 (80)
T ss_dssp TTCEEECSSSSCEEEEHH
T ss_pred CCCeEECCCCCCEEEecC
Confidence 457799999999887764
No 73
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=72.25 E-value=2.8 Score=29.28 Aligned_cols=27 Identities=22% Similarity=0.529 Sum_probs=19.1
Q ss_pred EEEcCcCCcceec-------CCCCCeecCCCCCe
Q psy2244 17 EKYYLECHFENEI-------RPRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~i-------k~~d~IRC~~CG~R 43 (73)
...|..|+...+. .....-+|+.||..
T Consensus 121 ~~~C~~C~~~~~~~~~~~~~~~~~~p~C~~Cgg~ 154 (246)
T 1yc5_A 121 EYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSL 154 (246)
T ss_dssp EEEETTTCCEEEHHHHHHHTTTCSSCBCTTTCCB
T ss_pred eeEcCCCCCCCcHHHHHHHhccCCCCCCCCCCCc
Confidence 4679999987553 22245699999974
No 74
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=72.16 E-value=2.6 Score=24.10 Aligned_cols=25 Identities=16% Similarity=0.131 Sum_probs=17.5
Q ss_pred EcCcCCcc-eecC-CCCCeecCCCCCe
Q psy2244 19 YYLECHFE-NEIR-PRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e-~~ik-~~d~IRC~~CG~R 43 (73)
+|.+||.. +..+ ....+.|..||.=
T Consensus 13 ~Cp~C~~~~lv~D~~~ge~vC~~CGlV 39 (58)
T 1dl6_A 13 TCPNHPDAILVEDYRAGDMICPECGLV 39 (58)
T ss_dssp SBTTBSSSCCEECSSSCCEECTTTCCE
T ss_pred cCcCCCCCceeEeCCCCeEEeCCCCCE
Confidence 69999873 3333 4456999999863
No 75
>1hxr_A Guanine nucleotide exchange factor MSS4; RAB GTPase, membrane trafficking, Zn binding site, metal binding protein; 1.65A {Rattus norvegicus} SCOP: b.88.1.1 PDB: 1fwq_A 2fu5_A
Probab=71.58 E-value=2 Score=28.02 Aligned_cols=19 Identities=26% Similarity=0.739 Sum_probs=15.4
Q ss_pred CCCCeecCCCCCeEEEeee
Q psy2244 31 PRDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 31 ~~d~IRC~~CG~RILyKkR 49 (73)
....|+|+.|+.+||=+..
T Consensus 9 N~~~i~C~~C~s~il~~~~ 27 (115)
T 1hxr_A 9 NRKAVLCQRCGSRVLQPGT 27 (115)
T ss_dssp BSSCEEETTTCCEEECTTS
T ss_pred ccCeEECCCCCCEEeccCc
Confidence 4467999999999996654
No 76
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=71.00 E-value=2.1 Score=27.30 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=16.3
Q ss_pred ecCCCCCeecCCCCCeEEEee
Q psy2244 28 EIRPRDPIRCRECGYRIMYKK 48 (73)
Q Consensus 28 ~ik~~d~IRC~~CG~RILyKk 48 (73)
+++....+.|+|||-|-.+|.
T Consensus 42 ~i~~~g~~~CpYCg~~y~~~~ 62 (87)
T 2jz8_A 42 DMGSTDEKICPYCSTLYRYDP 62 (87)
T ss_dssp ECTTCCEECCTTTCCEEECCT
T ss_pred EcCCCCeEECCCCCCEeEcCC
Confidence 455567899999999877664
No 77
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=70.99 E-value=3.4 Score=22.48 Aligned_cols=27 Identities=19% Similarity=0.326 Sum_probs=15.4
Q ss_pred EEEcCcCCcceecC-----------CCCCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIR-----------PRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~R 43 (73)
.|.|..|+..+... ...+..|+.||..
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 71 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred CccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCch
Confidence 46777776655422 2245667777654
No 78
>3lpe_B DNA-directed RNA polymerase subunit E''; transcription regulation, SPT4, SPT5, NUSG, archaea, evoluti directed RNA polymerase; 1.90A {Methanocaldococcus jannaschii} SCOP: g.41.9.0
Probab=70.63 E-value=2 Score=25.32 Aligned_cols=19 Identities=21% Similarity=0.503 Sum_probs=15.2
Q ss_pred EcCcCCcceecCCCCCeecCCCCC
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
-|..|+...+.+ .||+||.
T Consensus 3 AC~~C~~v~~~~-----~CpnC~~ 21 (59)
T 3lpe_B 3 ACLKCKYLTNDE-----ICPICHS 21 (59)
T ss_dssp EETTTCBEESSS-----BCTTTCC
T ss_pred ccccCCcccCCC-----CCCCCCC
Confidence 388898887555 6999998
No 79
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=70.56 E-value=2.9 Score=26.53 Aligned_cols=24 Identities=29% Similarity=0.656 Sum_probs=18.8
Q ss_pred cCcCCcceecCCCC-----CeecCCCCCe
Q psy2244 20 YLECHFENEIRPRD-----PIRCRECGYR 43 (73)
Q Consensus 20 C~~Cg~e~~ik~~d-----~IRC~~CG~R 43 (73)
|.+||....++... ...|+.|||.
T Consensus 7 Cp~Cgn~L~~~~~~~~~~~~~~C~~C~y~ 35 (113)
T 3h0g_I 7 CIECNNMLYPREDKVDRVLRLACRNCDYS 35 (113)
T ss_dssp CSSSCCCCEECCCTTTCCCCEECSSSCCE
T ss_pred CcCCCCEeeEcccCCCCeeEEECCCCCCe
Confidence 88999887776432 5899999994
No 80
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.12 E-value=4.6 Score=23.00 Aligned_cols=9 Identities=44% Similarity=1.128 Sum_probs=4.4
Q ss_pred CeecCCCCC
Q psy2244 34 PIRCRECGY 42 (73)
Q Consensus 34 ~IRC~~CG~ 42 (73)
+..|+.|+.
T Consensus 37 ~~~C~~C~~ 45 (110)
T 2csh_A 37 PYGCGVCGK 45 (110)
T ss_dssp SEECTTTSC
T ss_pred CccCCCCCc
Confidence 345555544
No 81
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=70.09 E-value=3.2 Score=22.41 Aligned_cols=30 Identities=17% Similarity=0.294 Sum_probs=21.7
Q ss_pred ceEEEcCcCCcceecC-----------CC--CCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEIR-----------PR--DPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik-----------~~--d~IRC~~CG~RI 44 (73)
...|.|..|+..+..+ .. .+..|+.||...
T Consensus 13 ~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f 55 (77)
T 2ct1_A 13 EKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI 55 (77)
T ss_dssp CCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEE
T ss_pred CCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCcc
Confidence 3459999999886532 12 478999999754
No 82
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=69.91 E-value=8 Score=24.28 Aligned_cols=37 Identities=16% Similarity=0.247 Sum_probs=26.3
Q ss_pred eccccCCcceEEEcCcCCcceec--CCCCCeecCCCCCe
Q psy2244 7 LVGKCLPGDIEKYYLECHFENEI--RPRDPIRCRECGYR 43 (73)
Q Consensus 7 l~~~~~~~~v~YiC~~Cg~e~~i--k~~d~IRC~~CG~R 43 (73)
|+-.+...=|.=+|.+|+.+..+ .....|.|..||.-
T Consensus 22 Lv~~PnS~Fm~VkCp~C~n~q~VFShA~t~V~C~~Cg~~ 60 (81)
T 2xzm_6 22 LIQAPNSYFMDVKCAQCQNIQMIFSNAQSTIICEKCSAI 60 (81)
T ss_dssp SSCCCSCCEEEEECSSSCCEEEEETTCSSCEECSSSCCE
T ss_pred eeeCCCCcEEEeECCCCCCeeEEEecCccEEEccCCCCE
Confidence 33334444477799999998543 36688999999964
No 83
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=69.77 E-value=2.4 Score=25.70 Aligned_cols=18 Identities=17% Similarity=0.416 Sum_probs=14.3
Q ss_pred CCCCeecCCCCCeEEEee
Q psy2244 31 PRDPIRCRECGYRIMYKK 48 (73)
Q Consensus 31 ~~d~IRC~~CG~RILyKk 48 (73)
....+.|++||-+-.+|.
T Consensus 37 ~~g~~~CpYCg~~f~l~~ 54 (67)
T 2jrr_A 37 DTGWVECPYCDCKYVLKG 54 (67)
T ss_dssp TTSEEEETTTTEEEEETT
T ss_pred CCCeEECCCCCCEEEECC
Confidence 356799999998877764
No 84
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.72 E-value=4.4 Score=21.42 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=22.2
Q ss_pred eEEEcCcCCccee---------cCCCCCeecC-CCCCeEEE
Q psy2244 16 IEKYYLECHFENE---------IRPRDPIRCR-ECGYRIMY 46 (73)
Q Consensus 16 v~YiC~~Cg~e~~---------ik~~d~IRC~-~CG~RILy 46 (73)
..|.|..||+.+. .....+..|+ .||.....
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~~~~~p~~C~~~C~k~f~~ 49 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQCPRLPVACPNQCGVGTVA 49 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHHCSSSEEECTTCCSCCEEE
T ss_pred CCeeccccCCccCHHHHHHHHHHcCCcCccCCcccCccccc
Confidence 4699999998875 1123568999 99986543
No 85
>1vzi_A Desulfoferrodoxin; ferrocyanide, microspectrophotometry, redox states, photoreduction, dinuclear iron cluster, oxidoreductase; 1.15A {Desulfovibrio baarsii} SCOP: b.1.13.1 g.41.5.2 PDB: 1vzh_A* 1vzg_A 2ji1_A 2ji2_A 2ji3_A 1dfx_A
Probab=69.71 E-value=3.1 Score=27.07 Aligned_cols=26 Identities=15% Similarity=0.114 Sum_probs=18.8
Q ss_pred ceEEEcCcCCcceec--CCCCCeecCCCCC
Q psy2244 15 DIEKYYLECHFENEI--RPRDPIRCRECGY 42 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i--k~~d~IRC~~CG~ 42 (73)
..-|+|..||..+.. .....+.| ||-
T Consensus 5 ~~fYkC~~CGnivev~~~g~~~l~C--CG~ 32 (126)
T 1vzi_A 5 LQVYKCEVCGNIVEVLNGGIGELVC--CNQ 32 (126)
T ss_dssp TCEEECTTTCCEEEEEECCSSCEEE--TTE
T ss_pred CcEEEcCCCCeEEEEEcCCCcceec--CCc
Confidence 357999999999873 34455677 665
No 86
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.46 E-value=2.9 Score=19.18 Aligned_cols=15 Identities=7% Similarity=-0.031 Sum_probs=9.4
Q ss_pred cceEEEcCcCCccee
Q psy2244 14 GDIEKYYLECHFENE 28 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ 28 (73)
+...|.|..|++.+.
T Consensus 6 ~~k~~~C~~C~k~f~ 20 (36)
T 2elv_A 6 SGLLYDCHICERKFK 20 (36)
T ss_dssp CCCCEECSSSCCEES
T ss_pred CCCCeECCCCCCccC
Confidence 344577777776653
No 87
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=69.27 E-value=3.7 Score=28.74 Aligned_cols=28 Identities=18% Similarity=0.389 Sum_probs=19.6
Q ss_pred EEEcCcCCcceecCC----CCCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIRP----RDPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~----~d~IRC~~CG~RI 44 (73)
...|..|+...+.+. ...-+|+.||..+
T Consensus 121 ~~~C~~C~~~~~~~~~~~~~~~p~C~~Cgg~l 152 (249)
T 1m2k_A 121 VVRCTSCNNSFEVESAPKIPPLPKCDKCGSLL 152 (249)
T ss_dssp EEEESSSSCEEECSSCCCSSSCCBCSSSSSBE
T ss_pred eeEeCCCCCcccchhhccCCCCCCCCCCCCCc
Confidence 467999998765432 2246999999754
No 88
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=68.97 E-value=2.5 Score=22.89 Aligned_cols=31 Identities=23% Similarity=0.363 Sum_probs=22.7
Q ss_pred cceEEEcCcCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 14 GDIEKYYLECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
+...|.|..|+..+... ...+..|+.||...
T Consensus 15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 56 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAF 56 (77)
T ss_dssp CSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEE
T ss_pred CCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCcc
Confidence 44679999999887532 23568999999753
No 89
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=68.45 E-value=3.9 Score=24.09 Aligned_cols=23 Identities=26% Similarity=0.612 Sum_probs=16.7
Q ss_pred EcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
.|..|+..+ .....+|..||+..
T Consensus 37 ~C~~C~~~l---~~qG~kC~~C~~~c 59 (72)
T 2fnf_X 37 WCDLCGREV---LRQALRCANCKFTC 59 (72)
T ss_dssp BCTTTSSBC---SSCCEECTTSSCEE
T ss_pred chhhhhHHH---HhCcCccCCCCCee
Confidence 477887777 45678888888753
No 90
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=68.27 E-value=4.1 Score=23.30 Aligned_cols=28 Identities=18% Similarity=0.280 Sum_probs=15.8
Q ss_pred eEEEcCcCCcceecC-----------CCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENEIR-----------PRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~R 43 (73)
..|.|..|+..+... ...+..|+.||..
T Consensus 65 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 103 (124)
T 2dlq_A 65 QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQ 103 (124)
T ss_dssp CCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCE
T ss_pred CCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccch
Confidence 446677776665422 2245667777654
No 91
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=68.24 E-value=4 Score=22.53 Aligned_cols=11 Identities=9% Similarity=0.283 Sum_probs=5.8
Q ss_pred EEEcCcCCcce
Q psy2244 17 EKYYLECHFEN 27 (73)
Q Consensus 17 ~YiC~~Cg~e~ 27 (73)
.|.|..|+..+
T Consensus 36 ~~~C~~C~~~f 46 (96)
T 2dmd_A 36 PYKCKTCDYAA 46 (96)
T ss_dssp SEECSSSCCEE
T ss_pred CEeCCCCCCcc
Confidence 35555555544
No 92
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=67.89 E-value=3.5 Score=29.08 Aligned_cols=31 Identities=13% Similarity=0.273 Sum_probs=22.6
Q ss_pred cceEEEcCcCCcceecCCC----------CCeecCCCCCeE
Q psy2244 14 GDIEKYYLECHFENEIRPR----------DPIRCRECGYRI 44 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik~~----------d~IRC~~CG~RI 44 (73)
++-...|..|+.++..... ..++|++|+..+
T Consensus 19 ~~l~l~Cp~C~~~~~F~gv~~~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 19 VTLELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp CCEEEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBC
T ss_pred ceeEEECCCCCCccCCCCcccCCCcccccccccCCCCCCcC
Confidence 4677899999988766521 357899998853
No 93
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=67.85 E-value=4.5 Score=22.78 Aligned_cols=24 Identities=25% Similarity=0.571 Sum_probs=16.8
Q ss_pred EEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
-.|..||..+ .....+|..|++..
T Consensus 23 t~C~~C~~~i---~kqg~kC~~C~~~c 46 (59)
T 1rfh_A 23 GWCDLCGREV---LRQALRCANCKFTC 46 (59)
T ss_dssp EECTTTCSEE---CSCCEECTTTSCEE
T ss_pred eEchhcchhh---hhCccEeCCCCCeE
Confidence 3477887777 45668888887643
No 94
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=67.76 E-value=3.8 Score=29.33 Aligned_cols=28 Identities=18% Similarity=0.373 Sum_probs=19.1
Q ss_pred EEEcCcCCcceecC----------CCCCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIR----------PRDPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik----------~~d~IRC~~CG~RI 44 (73)
...|.+|+...+.. ....-+|+.||..+
T Consensus 136 ~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~C~~Cgg~l 173 (289)
T 1q1a_A 136 HCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELV 173 (289)
T ss_dssp EEEETTTCCEECHHHHHHHHTCSSCCSCCBCTTTCCBE
T ss_pred ceEECCCCCCCcHHHHHHHHhhccCCCCccCCCCCCEE
Confidence 46799998875431 12346999999743
No 95
>3p8b_A DNA-directed RNA polymerase, subunit E''; transcription elongation factor, RNA polymerase, transferase transcription complex; 1.80A {Pyrococcus furiosus}
Probab=67.46 E-value=2.2 Score=26.89 Aligned_cols=20 Identities=35% Similarity=0.790 Sum_probs=16.2
Q ss_pred EcCcCCcceecCCCCCeecCCCCCe
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
-|.+|+..++-+ .||+||..
T Consensus 25 AC~~C~~v~~~d-----~CPnCgs~ 44 (81)
T 3p8b_A 25 ACRHCHYITSED-----RCPVCGSR 44 (81)
T ss_dssp EETTTCBEESSS-----SCTTTCCC
T ss_pred HHhhCCCccCCC-----CCCCCCCC
Confidence 499999987543 59999984
No 96
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=67.15 E-value=2.3 Score=27.94 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=24.1
Q ss_pred CcceEEEcCcCCcceecCCCCCeecCCCCCeEEEe
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCRECGYRIMYK 47 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyK 47 (73)
-.-+.-+|.+||+..-... ..|++||..-+--
T Consensus 43 grL~~~rC~~CG~~~~PPr---~~Cp~C~s~~~~~ 74 (145)
T 3irb_A 43 NKIIGSKCSKCGRIFVPAR---SYCEHCFVKIENY 74 (145)
T ss_dssp TCCEEEECTTTCCEEESCC---SEETTTTEECCEE
T ss_pred CeEEEEEeCCCCcEEcCch---hhCcCCCCCceee
Confidence 3446789999999876543 5699999987644
No 97
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=66.90 E-value=3 Score=22.68 Aligned_cols=13 Identities=8% Similarity=-0.181 Sum_probs=6.7
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|.+||..+.
T Consensus 8 ~~~~C~~C~~~i~ 20 (39)
T 2i5o_A 8 DQVPCEKCGSLVP 20 (39)
T ss_dssp CEEECTTTCCEEE
T ss_pred CCcccccccCcCC
Confidence 4455555555543
No 98
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.89 E-value=4.5 Score=19.62 Aligned_cols=16 Identities=19% Similarity=0.059 Sum_probs=11.3
Q ss_pred ceEEEcCcCCcceecC
Q psy2244 15 DIEKYYLECHFENEIR 30 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik 30 (73)
...|.|..||+.+.-+
T Consensus 10 ~~~~~C~~C~k~f~~~ 25 (46)
T 2ytg_A 10 EKPFKCGECGKSYNQR 25 (46)
T ss_dssp CCSEECTTTCCEESSS
T ss_pred CCCeECCCCCcccCCH
Confidence 3458899998876543
No 99
>2gai_A DNA topoisomerase I; zinc ribbon; HET: DNA; 1.70A {Thermotoga maritima} PDB: 2gaj_A*
Probab=66.34 E-value=1.6 Score=34.96 Aligned_cols=49 Identities=12% Similarity=-0.010 Sum_probs=27.8
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCC-CeEEEeeeCCeeEEEeeccCCCCCcce
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECG-YRIMYKKRTKRCILYFKPQTGGFPKLK 68 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG-~RILyKkRt~r~vqf~~~~~~~~~~~~ 68 (73)
..-.| .||....++.+.--.||.|| ..++-++..+. -.| +.|.+||.-+
T Consensus 555 ~~~~c-~cg~~~~~k~g~~G~CP~Cg~g~l~~r~~k~G-~~f--~gCs~yp~C~ 604 (633)
T 2gai_A 555 TNQKC-SCGKEMRLSFGKYGFYLKCECGKTRSVKNDEI-AVI--DDGKIFLGRK 604 (633)
T ss_dssp EEEEC-TTSCEEEEEEETTEEEEECSSSCCEECCTTSB-CEE--ETTEEEC---
T ss_pred ccchh-hcCceeeecccccccCcccCCCcceeecccCC-CeE--EeCCCCcCCC
Confidence 45679 99987665544445699999 66665532222 112 3566666543
No 100
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.63 E-value=5.4 Score=21.43 Aligned_cols=30 Identities=13% Similarity=0.300 Sum_probs=20.9
Q ss_pred ceEEEcCcCCcceecC-----------CC----CCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEIR-----------PR----DPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik-----------~~----d~IRC~~CG~RI 44 (73)
...|.|..|+..+... .. .+..|+.||...
T Consensus 13 ~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f 57 (86)
T 1x6h_A 13 EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTF 57 (86)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEE
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChh
Confidence 3559999998876422 11 468999999754
No 101
>3ir9_A Peptide chain release factor subunit 1; structural genomics, APC36528.1, C-terminal domain, PSI-2, protein structure initiative; 2.21A {Methanosarcina mazei}
Probab=65.54 E-value=11 Score=25.29 Aligned_cols=49 Identities=18% Similarity=0.346 Sum_probs=29.1
Q ss_pred CCccce-eccccCCc-ceEEEcCcCCcceec--------CCCCCeecCCCCCeEEEeee
Q psy2244 1 MGYSQV-LVGKCLPG-DIEKYYLECHFENEI--------RPRDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 1 ~~~~~~-l~~~~~~~-~v~YiC~~Cg~e~~i--------k~~d~IRC~~CG~RILyKkR 49 (73)
|||-+. |+-+.+.. .+.|+|..||.+... +..+.-.||.||...--..|
T Consensus 60 ~GAVetLlv~e~l~~~r~~~~c~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~~~~~~e~ 118 (166)
T 3ir9_A 60 INSVDVLLLSEDLRAERVTTKCSVCGYENKWTRRWKPGEPAPAAGNCPKCGSSLEVTDV 118 (166)
T ss_dssp TTCEEEEEEETTCCCEEEEEEESSSSCEEEEEECCCC--CCCCCCBCTTTCCBEEEEEE
T ss_pred hCCceEEEEecCccceEEEEECCCCCceeEEEeecChhhcccccccccccCccchhhhH
Confidence 455543 44555443 378999999964311 12244579999997544333
No 102
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.76 E-value=5.3 Score=19.25 Aligned_cols=15 Identities=13% Similarity=-0.088 Sum_probs=10.9
Q ss_pred eEEEcCcCCcceecC
Q psy2244 16 IEKYYLECHFENEIR 30 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik 30 (73)
..|.|..||+.+.-+
T Consensus 11 k~~~C~~C~k~F~~~ 25 (46)
T 2epw_A 11 KPCKCTECGKAFCWK 25 (46)
T ss_dssp CSEECSSSCCEESSS
T ss_pred CCeeCCCCCCccCCH
Confidence 458899998876543
No 103
>2odx_A Cytochrome C oxidase polypeptide IV; all beta-protein, metallo-protein, oxidoreductase; NMR {Saccharomyces cerevisiae}
Probab=64.48 E-value=4.5 Score=24.92 Aligned_cols=19 Identities=26% Similarity=0.480 Sum_probs=14.0
Q ss_pred ecCCCCCeecCCCCCeEEE
Q psy2244 28 EIRPRDPIRCRECGYRIMY 46 (73)
Q Consensus 28 ~ik~~d~IRC~~CG~RILy 46 (73)
.+..+.+-||++||+--..
T Consensus 50 ~l~~g~~~RC~eCG~~fkL 68 (80)
T 2odx_A 50 KPTVNEVARCWECGSVYKL 68 (80)
T ss_dssp CCCTTCEEECSSSCCEEEE
T ss_pred EecCCCCeECCCCCeEEEE
Confidence 3567788899999985433
No 104
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=63.66 E-value=3 Score=27.66 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=24.7
Q ss_pred eeccccCCcceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 6 VLVGKCLPGDIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 6 ~l~~~~~~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
|+.|-....-..-+|.+||...-... ..|+.||..
T Consensus 36 fw~~l~~g~L~~~rC~~CG~~~fPPr---~~Cp~C~s~ 70 (145)
T 2gnr_A 36 FFNGLKQNKIIGSKCSKCGRIFVPAR---SYCEHCFVK 70 (145)
T ss_dssp HHHHHHTTCCEEEECTTTCCEEESCC---SEETTTTEE
T ss_pred HHhhhhCCEEEEEEECCCCcEEeCCC---CCCCCCCCC
Confidence 44444444557789999999865432 479999987
No 105
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=63.65 E-value=7.4 Score=24.51 Aligned_cols=36 Identities=11% Similarity=0.174 Sum_probs=25.9
Q ss_pred ccccCCcceEEEcCcCCcceec--CCCCCeecCCCCCe
Q psy2244 8 VGKCLPGDIEKYYLECHFENEI--RPRDPIRCRECGYR 43 (73)
Q Consensus 8 ~~~~~~~~v~YiC~~Cg~e~~i--k~~d~IRC~~CG~R 43 (73)
+-.+.+-=|.=+|.+|+.+..+ .....|.|..||.-
T Consensus 25 v~~PnS~Fm~VkCp~C~~~q~VFSha~t~V~C~~Cg~~ 62 (82)
T 3u5c_b 25 VQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCSTI 62 (82)
T ss_dssp SCCCCCCEEEEECTTSCSCEEEESBCSSCCCCSSSCCC
T ss_pred ccCCCCcEEEEECCCCCCeeEEEecCCeEEEccccCCE
Confidence 3333344488899999988543 36788999999963
No 106
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=63.63 E-value=5.1 Score=28.09 Aligned_cols=26 Identities=31% Similarity=0.635 Sum_probs=18.9
Q ss_pred EEEcCcCCcceecC-------CCCCeecCCCCC
Q psy2244 17 EKYYLECHFENEIR-------PRDPIRCRECGY 42 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik-------~~d~IRC~~CG~ 42 (73)
...|..|+...+.+ ..+.-+|+.||.
T Consensus 123 ~~~C~~C~~~~~~~~~~~~~~~~~~p~C~~Cgg 155 (253)
T 1ma3_A 123 KLDCLDCHETYDWSEFVEDFNKGEIPRCRKCGS 155 (253)
T ss_dssp EEEETTTCCEEEGGGTHHHHHTTCCCCCTTTCC
T ss_pred eeeeCCCCCcCcHHHHHHHhccCCCCCCCCCCC
Confidence 46799999876543 223469999997
No 107
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.48 E-value=4.3 Score=19.75 Aligned_cols=15 Identities=13% Similarity=0.095 Sum_probs=10.8
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2em8_A 10 EKPYKCVECGKGYKR 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeECcccCchhCC
Confidence 345889899887653
No 108
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=62.87 E-value=6.8 Score=20.67 Aligned_cols=32 Identities=19% Similarity=0.301 Sum_probs=22.8
Q ss_pred CcceEEEcC--cCCcceecC-----------CCCCeecCCCCCeE
Q psy2244 13 PGDIEKYYL--ECHFENEIR-----------PRDPIRCRECGYRI 44 (73)
Q Consensus 13 ~~~v~YiC~--~Cg~e~~ik-----------~~d~IRC~~CG~RI 44 (73)
+..-.|.|. .|++.+..+ ...+..|+.||...
T Consensus 15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f 59 (73)
T 1f2i_G 15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59 (73)
T ss_dssp CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchh
Confidence 345569996 799887533 23568999999753
No 109
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.83 E-value=4.5 Score=19.60 Aligned_cols=14 Identities=14% Similarity=-0.176 Sum_probs=10.3
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..||+.+..
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2yso_A 11 KSHQCRECGEIFFQ 24 (46)
T ss_dssp CCEECTTTCCEESS
T ss_pred CCEEccccChhhCC
Confidence 45888888887653
No 110
>1ryq_A DNA-directed RNA polymerase, subunit E''; structural genomics, zinc, PSI, protein structure initiative; 1.38A {Pyrococcus furiosus} SCOP: g.41.9.3 PDB: 3qqc_E
Probab=62.82 E-value=2.9 Score=25.47 Aligned_cols=23 Identities=39% Similarity=0.745 Sum_probs=17.2
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.+--|.+|+..+ +.-.||+||..
T Consensus 10 ~~~AC~~C~~~~-----~~~~CPnC~s~ 32 (69)
T 1ryq_A 10 SEKACRHCHYIT-----SEDRCPVCGSR 32 (69)
T ss_dssp -CEEETTTCBEE-----SSSSCTTTCCC
T ss_pred hhhhHHhCCccc-----cCCcCCCccCC
Confidence 445688999966 55689999964
No 111
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=62.75 E-value=9.1 Score=24.55 Aligned_cols=23 Identities=22% Similarity=0.402 Sum_probs=16.7
Q ss_pred EcCcCCcceecCC-----CCCeecCCCC
Q psy2244 19 YYLECHFENEIRP-----RDPIRCRECG 41 (73)
Q Consensus 19 iC~~Cg~e~~ik~-----~d~IRC~~CG 41 (73)
-|..||....... .+.-.|+.||
T Consensus 5 ~C~~CG~~~~~~~~~G~~~~~~~~~~~~ 32 (189)
T 3cng_A 5 FCSQCGGEVILRIPEGDTLPRYICPKCH 32 (189)
T ss_dssp BCTTTCCBCEEECCTTCSSCEEEETTTT
T ss_pred cCchhCCccccccccCCCCcceECCCCC
Confidence 4889999987642 2345799998
No 112
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.71 E-value=5.8 Score=19.19 Aligned_cols=16 Identities=13% Similarity=-0.078 Sum_probs=11.1
Q ss_pred ceEEEcCcCCcceecC
Q psy2244 15 DIEKYYLECHFENEIR 30 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik 30 (73)
...|.|..|++.+.-+
T Consensus 10 ~k~~~C~~C~k~f~~~ 25 (46)
T 2yu8_A 10 EKPYKCNECGKVFTQN 25 (46)
T ss_dssp CSSEECSSSCCEESSS
T ss_pred CCCeECCcCCchhCCH
Confidence 3458888888876543
No 113
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=62.58 E-value=3.2 Score=24.48 Aligned_cols=29 Identities=10% Similarity=0.107 Sum_probs=21.0
Q ss_pred eEEEcCcCCcceecCC---------CCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIRP---------RDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~---------~d~IRC~~CG~RI 44 (73)
..|.|..||+.+.-+. ..+-.|+.||...
T Consensus 73 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f 110 (129)
T 2wbt_A 73 SQFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEF 110 (129)
T ss_dssp CSEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBC
T ss_pred CCeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCccc
Confidence 4599999998875321 3567899999753
No 114
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.50 E-value=4.2 Score=19.65 Aligned_cols=14 Identities=7% Similarity=-0.171 Sum_probs=10.2
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..||..+.-
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eme_A 11 KPYVCDYCGKAFGL 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeECCCCChhhCC
Confidence 45888888887653
No 115
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=62.19 E-value=3.9 Score=29.98 Aligned_cols=28 Identities=25% Similarity=0.546 Sum_probs=18.0
Q ss_pred eEEEcCcCCcce------ecCCC-CC----eecCCCCCe
Q psy2244 16 IEKYYLECHFEN------EIRPR-DP----IRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~------~ik~~-d~----IRC~~CG~R 43 (73)
..+.|..||... ..+.. ++ ..|.+||||
T Consensus 267 ~~~~C~~C~~~~~~~~q~Q~rsaDe~~t~f~~C~~Cg~~ 305 (309)
T 1pqv_S 267 DRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNR 305 (309)
T ss_pred ccccCCCCCCCeeEEEEeecccCCCCCcEEEEeCCCCCc
Confidence 368899998662 12222 22 689999986
No 116
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=61.89 E-value=6.7 Score=20.65 Aligned_cols=25 Identities=16% Similarity=0.401 Sum_probs=16.3
Q ss_pred EcCcCCcceecCCCCCeecCCCCCe
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.|..|+...---.....+|..|+..
T Consensus 13 ~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 13 FCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp BCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred CcCCCCceeeccCCccCEeCCCCCe
Confidence 4777776653223467888888764
No 117
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=61.66 E-value=5 Score=28.45 Aligned_cols=24 Identities=21% Similarity=0.300 Sum_probs=18.0
Q ss_pred EcCcCCcceecC-CCCCeecCCCCC
Q psy2244 19 YYLECHFENEIR-PRDPIRCRECGY 42 (73)
Q Consensus 19 iC~~Cg~e~~ik-~~d~IRC~~CG~ 42 (73)
-|+.||...... .+...+|+.||.
T Consensus 109 fC~~CG~~~~~~~~~~~~~C~~C~~ 133 (269)
T 1vk6_A 109 YCGYCGHEMYPSKTEWAMLCSHCRE 133 (269)
T ss_dssp BCTTTCCBEEECSSSSCEEESSSSC
T ss_pred ccccCCCcCccCCCceeeeCCCCCC
Confidence 488999887544 456678999987
No 118
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.38 E-value=3.7 Score=19.96 Aligned_cols=14 Identities=7% Similarity=-0.014 Sum_probs=10.4
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ysp_A 10 EKPYKCEKCGKGYN 23 (46)
T ss_dssp CCSEEETTTTEEES
T ss_pred CCCeECCCCCCccC
Confidence 34588999988765
No 119
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=61.20 E-value=4 Score=17.43 Aligned_cols=12 Identities=8% Similarity=-0.042 Sum_probs=9.1
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
.|.|..||..+.
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvh_A 3 PFSCSLCPQRSR 14 (27)
T ss_dssp CEECSSSSCEES
T ss_pred CccCCCcChhhC
Confidence 488888887764
No 120
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.18 E-value=4.9 Score=19.55 Aligned_cols=15 Identities=13% Similarity=-0.104 Sum_probs=10.9
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2eoo_A 10 ERPYGCNECGKNFGR 24 (46)
T ss_dssp CCCEECSSSCCEESS
T ss_pred CCCEEccccCcccCC
Confidence 345889999887653
No 121
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.00 E-value=4.1 Score=19.68 Aligned_cols=15 Identities=13% Similarity=-0.048 Sum_probs=10.6
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2emm_A 10 ERPHKCNECGKSFIQ 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeeCCCCChhhCC
Confidence 345888888887653
No 122
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.93 E-value=4.9 Score=18.33 Aligned_cols=14 Identities=7% Similarity=0.112 Sum_probs=8.7
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|+..+.
T Consensus 7 ~k~~~C~~C~k~f~ 20 (36)
T 2elq_A 7 GKPFKCSLCEYATR 20 (36)
T ss_dssp CCSEECSSSSCEES
T ss_pred CCCccCCCCCchhC
Confidence 34577777776653
No 123
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.62 E-value=6.2 Score=23.50 Aligned_cols=27 Identities=30% Similarity=0.452 Sum_probs=18.7
Q ss_pred cceEEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 14 GDIEKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
....-.|+-|...+. ..++|+.|++++
T Consensus 12 ~~~i~~C~IC~~~i~----~g~~C~~C~h~f 38 (74)
T 2ct0_A 12 PDAVKICNICHSLLI----QGQSCETCGIRM 38 (74)
T ss_dssp SSSSCBCSSSCCBCS----SSEECSSSCCEE
T ss_pred cCCCCcCcchhhHcc----cCCccCCCCchh
Confidence 344556888877775 357888888865
No 124
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.39 E-value=4.9 Score=19.48 Aligned_cols=15 Identities=7% Similarity=-0.164 Sum_probs=10.6
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2eml_A 10 EKPYECSVCGKAFSH 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeeCCCcCCccCC
Confidence 345888888887653
No 125
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=60.28 E-value=4 Score=24.19 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=14.9
Q ss_pred EEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.-.|..||.-.- .-.||+||..
T Consensus 6 mr~C~~CgvYTL-----k~~CP~CG~~ 27 (60)
T 2apo_B 6 MKKCPKCGLYTL-----KEICPKCGEK 27 (60)
T ss_dssp CEECTTTCCEES-----SSBCSSSCSB
T ss_pred ceeCCCCCCEec-----cccCcCCCCc
Confidence 357888876654 3458888864
No 126
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.26 E-value=4.7 Score=19.52 Aligned_cols=15 Identities=13% Similarity=-0.086 Sum_probs=10.7
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ene_A 10 EKPYKCNECGKVFRH 24 (46)
T ss_dssp SSSEECSSSCCEESS
T ss_pred CCCeECCCCCchhCC
Confidence 345889999887653
No 127
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.93 E-value=4.7 Score=19.61 Aligned_cols=15 Identities=13% Similarity=0.089 Sum_probs=10.7
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2em5_A 10 TKSHQCHECGRGFTL 24 (46)
T ss_dssp SCSEECSSSCCEESS
T ss_pred CCCeECCcCCCccCC
Confidence 345889999887653
No 128
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=59.93 E-value=7 Score=25.16 Aligned_cols=29 Identities=17% Similarity=0.296 Sum_probs=22.7
Q ss_pred ceEEEcCcCCcceecCCC-----CCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEIRPR-----DPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~-----d~IRC~~CG~RI 44 (73)
.-.|.|- ||..+.+... ..++|+.|.-.|
T Consensus 110 ~f~~~Cr-CG~~f~i~~~~l~~~~~v~C~sCSl~~ 143 (155)
T 2l6l_A 110 SFYLSCR-CGGKYSVSKDEAEEVSLISCDTCSLII 143 (155)
T ss_dssp EEEEECS-SSCEEEEETTHHHHCCEEECSSSSCEE
T ss_pred EEEEcCC-CCCeEEecHHHhCCCCEEECCCCceEE
Confidence 4568996 9999887754 579999999755
No 129
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.83 E-value=5 Score=23.51 Aligned_cols=30 Identities=13% Similarity=0.352 Sum_probs=21.9
Q ss_pred ceEEEcCcCCcce-ecC----------CCCCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFEN-EIR----------PRDPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~-~ik----------~~d~IRC~~CG~RI 44 (73)
.-.|.|..||+.+ .-+ ...+..|..||...
T Consensus 32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h~~k~~~C~~Cgk~F 72 (96)
T 2ctd_A 32 KGSVSCPTCQAVGRKTIEGLKKHMENCKQEMFTCHHCGKQL 72 (96)
T ss_dssp TSCEECTTTCSCEESSHHHHHHHHHHHCCCCCCCSSSCCCC
T ss_pred CCCcCCCCCCCCcccCHHHHHHHHHHHCCCCeECCCCCCee
Confidence 3459999999998 322 23568899999753
No 130
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=59.67 E-value=7.2 Score=23.74 Aligned_cols=33 Identities=15% Similarity=0.191 Sum_probs=23.1
Q ss_pred CCcceEEEcCcCCcceecC---------------CCCCeecCCCCCeE
Q psy2244 12 LPGDIEKYYLECHFENEIR---------------PRDPIRCRECGYRI 44 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~ik---------------~~d~IRC~~CG~RI 44 (73)
..+.-.|.|..||..+..+ ...+..|..||...
T Consensus 13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F 60 (102)
T 2ghf_A 13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60 (102)
T ss_dssp CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEE
T ss_pred CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCccc
Confidence 4455679999999886421 12468999999754
No 131
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=59.53 E-value=4.3 Score=17.29 Aligned_cols=12 Identities=8% Similarity=-0.128 Sum_probs=8.9
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
.|.|..||+.+.
T Consensus 3 ~~~C~~C~k~f~ 14 (28)
T 2kvf_A 3 PYSCSVCGKRFS 14 (28)
T ss_dssp SEECSSSCCEES
T ss_pred CccCCCCCcccC
Confidence 388888887764
No 132
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.49 E-value=6.2 Score=18.38 Aligned_cols=14 Identities=21% Similarity=0.498 Sum_probs=10.0
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 7 ~k~~~C~~C~k~f~ 20 (37)
T 2elm_A 7 GHLYYCSQCHYSSI 20 (37)
T ss_dssp SCEEECSSSSCEEE
T ss_pred CcCeECCCCCcccC
Confidence 34588888887764
No 133
>1v54_F VI, cytochrome C oxidase polypeptide VB; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: g.41.5.3 PDB: 1oco_F* 1occ_F* 1ocz_F* 1ocr_F* 1v55_F* 2dyr_F* 2dys_F* 2eij_F* 2eik_F* 2eil_F* 2eim_F* 2ein_F* 2occ_F* 2ybb_Q* 2zxw_F* 3abk_F* 3abl_F* 3abm_F* 3ag1_F* 3ag2_F* ...
Probab=59.33 E-value=6.3 Score=25.06 Aligned_cols=17 Identities=24% Similarity=0.649 Sum_probs=13.0
Q ss_pred cCCCCCeecCCCCCeEE
Q psy2244 29 IRPRDPIRCRECGYRIM 45 (73)
Q Consensus 29 ik~~d~IRC~~CG~RIL 45 (73)
+..+.+-||++||+-..
T Consensus 74 l~~g~~~RC~eCG~~fk 90 (98)
T 1v54_F 74 LHKGEAQRCPSCGTHYK 90 (98)
T ss_dssp EESSSCEECTTTCCEEE
T ss_pred EeCCCceECCCCCeEEE
Confidence 55677899999998433
No 134
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.17 E-value=5.7 Score=18.10 Aligned_cols=13 Identities=8% Similarity=-0.263 Sum_probs=8.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 8 k~~~C~~C~k~f~ 20 (36)
T 2els_A 8 KIFTCEYCNKVFK 20 (36)
T ss_dssp CCEECTTTCCEES
T ss_pred CCEECCCCCceeC
Confidence 4577777766653
No 135
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=59.07 E-value=4.3 Score=17.21 Aligned_cols=12 Identities=8% Similarity=-0.200 Sum_probs=9.0
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
.|.|..||..+.
T Consensus 3 ~~~C~~C~~~f~ 14 (30)
T 2m0d_A 3 PYQCDYCGRSFS 14 (30)
T ss_dssp CEECTTTCCEES
T ss_pred CccCCCCCcccC
Confidence 488888887764
No 136
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.06 E-value=2.1 Score=22.38 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=20.8
Q ss_pred ceEEEcCcCCcceecCC----CCCeecCCCCCe
Q psy2244 15 DIEKYYLECHFENEIRP----RDPIRCRECGYR 43 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~----~d~IRC~~CG~R 43 (73)
...|.|..||..+..+. ..+..|+.||..
T Consensus 16 ~~~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~ 48 (73)
T 2ctu_A 16 DRSQKCSKCGIIFIRRSTLSRRKTPMCEKCRKD 48 (73)
T ss_dssp CSEEECSSSCCEEECCCCCCCSSSCCCHHHHHT
T ss_pred CCCeeCCcccchhCCHHHhCcCCCCCCCCCChh
Confidence 45699999998875442 456788888764
No 137
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=59.03 E-value=4.7 Score=26.61 Aligned_cols=36 Identities=22% Similarity=0.387 Sum_probs=20.7
Q ss_pred eccccCCcceEEEcCcCCcceecCCCC-----CeecCCCCC
Q psy2244 7 LVGKCLPGDIEKYYLECHFENEIRPRD-----PIRCRECGY 42 (73)
Q Consensus 7 l~~~~~~~~v~YiC~~Cg~e~~ik~~d-----~IRC~~CG~ 42 (73)
|+.+..-....-=|.+||.-.-++... ...|+.|||
T Consensus 14 ~~~~~~~~~~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY 54 (133)
T 3qt1_I 14 LVPRGSHMTTFRFCRDCNNMLYPREDKENNRLLFECRTCSY 54 (133)
T ss_dssp --------CCCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCC
T ss_pred cccCCccccCCeeCCCCCCEeeECccCCCceeEEECCCCCC
Confidence 343333333344599999887766432 589999999
No 138
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.92 E-value=4.4 Score=19.63 Aligned_cols=15 Identities=13% Similarity=-0.062 Sum_probs=10.6
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2en1_A 10 EKPFKCEECGKRFTQ 24 (46)
T ss_dssp CCSEEETTTTEEESS
T ss_pred CCCeeCCCCCcccCC
Confidence 345888888877653
No 139
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.81 E-value=5.6 Score=19.22 Aligned_cols=14 Identities=14% Similarity=-0.014 Sum_probs=10.2
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2eq0_A 10 EKPYKCHECGKVFR 23 (46)
T ss_dssp CCCEECTTTCCEES
T ss_pred CCCeECCCCCchhC
Confidence 34588888887765
No 140
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.68 E-value=5.7 Score=19.22 Aligned_cols=15 Identities=13% Similarity=-0.057 Sum_probs=10.6
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2emy_A 10 ENPYECHECGKAFSR 24 (46)
T ss_dssp SCCEECSSSCCEESS
T ss_pred CcCcCCCCCCcccCc
Confidence 345888888887653
No 141
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=58.49 E-value=5 Score=22.62 Aligned_cols=28 Identities=18% Similarity=0.178 Sum_probs=17.1
Q ss_pred eEEEcCcCCcceecC-----------CCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENEIR-----------PRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-----------~~d~IRC~~CG~R 43 (73)
..|.|..|+..+... ...+..|+.|+..
T Consensus 16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 54 (106)
T 2ee8_A 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKA 54 (106)
T ss_dssp CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCB
T ss_pred cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccch
Confidence 457777777765422 2245677777754
No 142
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=58.40 E-value=2.4 Score=27.23 Aligned_cols=26 Identities=27% Similarity=0.507 Sum_probs=18.2
Q ss_pred EcCcCCcceecCC-----CCCeecCCCCCeE
Q psy2244 19 YYLECHFENEIRP-----RDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e~~ik~-----~d~IRC~~CG~RI 44 (73)
=|.+||....++. .....|+.|||..
T Consensus 6 FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~ 36 (122)
T 1twf_I 6 FCRDCNNMLYPREDKENNRLLFECRTCSYVE 36 (122)
T ss_dssp BCSSSCCBCEEEEETTTTEEEEECSSSSCEE
T ss_pred cccccCccCcccccCcCCCCEEECCcCCCee
Confidence 3788888766553 2458899998843
No 143
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=58.38 E-value=3 Score=17.62 Aligned_cols=11 Identities=9% Similarity=-0.239 Sum_probs=7.8
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||+.+.
T Consensus 2 ~~C~~C~k~f~ 12 (27)
T 1znf_A 2 YKCGLCERSFV 12 (27)
T ss_dssp CBCSSSCCBCS
T ss_pred ccCCCCCCcCC
Confidence 67888877654
No 144
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.20 E-value=6.1 Score=18.91 Aligned_cols=14 Identities=7% Similarity=-0.273 Sum_probs=10.2
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..||+.+.-
T Consensus 9 k~~~C~~C~k~f~~ 22 (44)
T 2emx_A 9 KPFGCSCCEKAFSS 22 (44)
T ss_dssp CCEECSSSSCEESS
T ss_pred cCccCCCCCcccCC
Confidence 45888888887653
No 145
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.18 E-value=5.6 Score=19.24 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=10.4
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2emp_A 10 VKPYMCNECGKAFSV 24 (46)
T ss_dssp CCSEECSSSCCEESC
T ss_pred CcCeECCCCCchhCC
Confidence 345888888877653
No 146
>1k81_A EIF-2-beta, probable translation initiation factor 2 beta subunit; zinc ribbon; NMR {Methanocaldococcus jannaschii} SCOP: g.59.1.1
Probab=58.10 E-value=2.7 Score=22.20 Aligned_cols=26 Identities=23% Similarity=0.425 Sum_probs=15.2
Q ss_pred EcCcCCcce-ecC---CCCCeecCCCCCeE
Q psy2244 19 YYLECHFEN-EIR---PRDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e~-~ik---~~d~IRC~~CG~RI 44 (73)
.|..|+... ++. ..-..+|..||++=
T Consensus 2 lC~~C~~peT~l~~~~~~~~l~C~aCG~~~ 31 (36)
T 1k81_A 2 ICRECGKPDTKIIKEGRVHLLKCMACGAIR 31 (36)
T ss_dssp CCSSSCSCEEEEEEETTEEEEEEETTTEEE
T ss_pred CCcCCCCCCcEEEEeCCcEEEEhhcCCCcc
Confidence 467776652 221 22447888888753
No 147
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=58.09 E-value=4.6 Score=17.02 Aligned_cols=12 Identities=17% Similarity=0.044 Sum_probs=8.4
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
.|.|..||..+.
T Consensus 2 ~~~C~~C~k~f~ 13 (29)
T 2m0f_A 2 PLKCRECGKQFT 13 (29)
T ss_dssp CEECTTTSCEES
T ss_pred CccCCCCCCccC
Confidence 377888887653
No 148
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=58.09 E-value=7.3 Score=24.33 Aligned_cols=10 Identities=20% Similarity=0.019 Sum_probs=4.8
Q ss_pred EEcCcCCcce
Q psy2244 18 KYYLECHFEN 27 (73)
Q Consensus 18 YiC~~Cg~e~ 27 (73)
|.|..|+..+
T Consensus 134 ~~C~~C~~~f 143 (190)
T 2i13_A 134 YKCPECGKSF 143 (190)
T ss_dssp EECTTTCCEE
T ss_pred eECCCCCccc
Confidence 4455554443
No 149
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=58.07 E-value=5.5 Score=19.20 Aligned_cols=13 Identities=15% Similarity=-0.018 Sum_probs=9.8
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2em9_A 11 KPYNCKECGKSFR 23 (46)
T ss_dssp CSEECSSSCCEES
T ss_pred cCeECCccccccC
Confidence 4588888887765
No 150
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=57.92 E-value=7.7 Score=29.14 Aligned_cols=29 Identities=17% Similarity=0.375 Sum_probs=19.1
Q ss_pred eEEEcCcCCcceecC-------C---CCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIR-------P---RDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-------~---~d~IRC~~CG~RI 44 (73)
-...|..|+...... . ...-+|+.||..+
T Consensus 143 ~~~~C~~C~~~~~~~~~~~~~~~~~~~~~P~Cp~Cgg~l 181 (361)
T 1q14_A 143 AHCHCIGCGKVYPPQVFKSKLAEHPIKDFVKCDVCGELV 181 (361)
T ss_dssp EEEEETTTCCEECTHHHHHHTTSSSCSCCCBCTTTCCBE
T ss_pred cccCcCCCCccCcHHHHHHHHhhcccCCCCCCcCCCCEe
Confidence 346799999865431 1 1236999999753
No 151
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.91 E-value=5.8 Score=19.17 Aligned_cols=14 Identities=14% Similarity=-0.095 Sum_probs=10.2
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..|++.+.-
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2ytd_A 11 KPYKCSECGKAFHR 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred cCeECCCCCCeeCC
Confidence 45888888887653
No 152
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.48 E-value=5.6 Score=19.25 Aligned_cols=13 Identities=15% Similarity=-0.158 Sum_probs=9.7
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2em7_A 11 KPYKCEECGKGFI 23 (46)
T ss_dssp CSEECSSSCCEES
T ss_pred cCccCCCccchhC
Confidence 4588888887765
No 153
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=57.27 E-value=9.8 Score=21.41 Aligned_cols=26 Identities=19% Similarity=0.457 Sum_probs=17.0
Q ss_pred EcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
.|..|+..+---.....+|..|+..+
T Consensus 25 ~C~~C~~~l~Gl~~qg~~C~~C~~~~ 50 (65)
T 2enz_A 25 FCEHCGTLLWGLARQGLKCDACGMNV 50 (65)
T ss_dssp BCSSSCCBCCCSSSCSEEESSSCCEE
T ss_pred CchhcChhheecCCcccccCCCCCcc
Confidence 47778776543345678888887643
No 154
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=57.26 E-value=5.8 Score=16.83 Aligned_cols=11 Identities=18% Similarity=-0.067 Sum_probs=8.2
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||..+.
T Consensus 3 ~~C~~C~k~f~ 13 (29)
T 1rik_A 3 FACPECPKRFM 13 (29)
T ss_dssp EECSSSSCEES
T ss_pred ccCCCCCchhC
Confidence 77888887654
No 155
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.07 E-value=4 Score=19.88 Aligned_cols=14 Identities=7% Similarity=0.022 Sum_probs=10.1
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..||+.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2elz_A 10 EKPYKCEDCGKGYN 23 (46)
T ss_dssp CSSCBCSSSCCBCS
T ss_pred CCCeeCcccCchhC
Confidence 34588888888765
No 156
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=57.04 E-value=5.8 Score=19.25 Aligned_cols=14 Identities=7% Similarity=-0.126 Sum_probs=10.4
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2el6_A 10 VNPYKCSQCEKSFS 23 (46)
T ss_dssp CCSEECSSSSCEES
T ss_pred CCCeECCCCCcccC
Confidence 34588999988765
No 157
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=56.94 E-value=6.7 Score=28.60 Aligned_cols=28 Identities=14% Similarity=0.095 Sum_probs=19.7
Q ss_pred eEEEcCcCCcceecC-------CCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENEIR-------PRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik-------~~d~IRC~~CG~R 43 (73)
....|.+|+.....+ ....-+|+.||..
T Consensus 138 ~~~~C~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~ 172 (285)
T 3glr_A 138 ASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGV 172 (285)
T ss_dssp EEEEETTTCCEEEGGGGHHHHHTTCCCBCTTTCCB
T ss_pred CeEEECCCCCcCCHHHHHHHhhcCCCCCCCCCCCc
Confidence 345799999876543 2345689999963
No 158
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=56.93 E-value=6 Score=23.80 Aligned_cols=30 Identities=17% Similarity=0.335 Sum_probs=21.8
Q ss_pred ccCCcceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 10 KCLPGDIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 10 ~~~~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
+..+.....+|..|++.+.+- +.+| .||.-
T Consensus 8 ~~~~k~~~~rC~~C~kkvgl~---~f~C-rCg~~ 37 (64)
T 1wfh_A 8 QPSPPQRPNRCTVCRKRVGLT---GFMC-RCGTT 37 (64)
T ss_dssp CCCCCSSCCCCTTTCCCCCTT---CEEC-SSSCE
T ss_pred cCCCCCcCCcChhhCCccCcc---CEEe-ecCCE
Confidence 345555678999999887765 6889 48863
No 159
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=56.75 E-value=9.2 Score=24.27 Aligned_cols=32 Identities=9% Similarity=0.143 Sum_probs=23.0
Q ss_pred CCcceEEEcCcCCcceec--CCCCCeecCCCCCe
Q psy2244 12 LPGDIEKYYLECHFENEI--RPRDPIRCRECGYR 43 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~i--k~~d~IRC~~CG~R 43 (73)
.+-=|.=+|.+|+.+..+ .....|.|..||.-
T Consensus 31 nS~Fm~VkCp~C~~~~~VFShA~t~V~C~~Cgtv 64 (86)
T 3iz6_X 31 NSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTV 64 (86)
T ss_dssp --CEEEEECTTTCCEEEEETTCSSCCCCSSSCCC
T ss_pred CCcEeEEECCCCCCeeEEEecCCcEEEccCCCCE
Confidence 333377799999988543 36688999999863
No 160
>1y07_A Desulfoferrodoxin (RBO); beta-sheet, iron binding, oxidoreductase; 1.55A {Treponema pallidum subsp}
Probab=56.62 E-value=6.2 Score=25.72 Aligned_cols=28 Identities=11% Similarity=-0.057 Sum_probs=16.3
Q ss_pred CcceEEEcCc-CCcceec--CCCCCeecCCCCC
Q psy2244 13 PGDIEKYYLE-CHFENEI--RPRDPIRCRECGY 42 (73)
Q Consensus 13 ~~~v~YiC~~-Cg~e~~i--k~~d~IRC~~CG~ 42 (73)
++..-|+|.. ||..+.. .....+.| ||-
T Consensus 3 ~~~~fYkC~~~CGnivev~~~g~~~l~C--CG~ 33 (128)
T 1y07_A 3 RELSFFLQKESAGFFLGMDAPAGSSVAC--GSE 33 (128)
T ss_dssp CCEEEECC-----CEEEESCCTTCEEEE--TTE
T ss_pred ccCcEEECCCCCCCEEEEEcCCCcceee--cCc
Confidence 3456799999 9999887 44455666 665
No 161
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=56.56 E-value=4.1 Score=17.62 Aligned_cols=12 Identities=8% Similarity=-0.089 Sum_probs=8.8
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
.|.|..||+.+.
T Consensus 3 ~~~C~~C~k~f~ 14 (27)
T 2kvg_A 3 PYRCPLCRAGCP 14 (27)
T ss_dssp TEEETTTTEEES
T ss_pred CcCCCCCCcccC
Confidence 378888887654
No 162
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.36 E-value=6 Score=19.12 Aligned_cols=14 Identities=14% Similarity=-0.111 Sum_probs=10.1
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2enc_A 10 EKPFKCEECGKGFY 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCcCCCCCCCcCC
Confidence 34588888887765
No 163
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.27 E-value=5.6 Score=19.24 Aligned_cols=15 Identities=7% Similarity=-0.150 Sum_probs=10.5
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2emh_A 10 ERPYICTVCGKAFTD 24 (46)
T ss_dssp CCSEECTTTCCEESS
T ss_pred CCCcCCCCCCchhCC
Confidence 345888888877653
No 164
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=56.12 E-value=2.5 Score=32.78 Aligned_cols=29 Identities=24% Similarity=0.545 Sum_probs=20.0
Q ss_pred eEEEcCcCCcceecC------C------CCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIR------P------RDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik------~------~d~IRC~~CG~RI 44 (73)
..=.|..||..-..+ | -....|++||||-
T Consensus 219 ~~s~Cp~C~~~~~t~~~~~~IP~F~eViims~~C~~CGyr~ 259 (404)
T 2qkd_A 219 FNTNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHRT 259 (404)
T ss_dssp EEECCTTTCCTTCEEEEEECCTTSCCEEEEEEECSSSCCEE
T ss_pred ecccCccCCCccEEEEEEEeCCCCCcEEEEEEECCCCCCcc
Confidence 556799998764322 1 1567899999963
No 165
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.09 E-value=5.8 Score=19.10 Aligned_cols=14 Identities=14% Similarity=0.007 Sum_probs=10.1
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2en8_A 10 EKSHTCDECGKNFC 23 (46)
T ss_dssp CSSEECTTTCCEES
T ss_pred CCCeECCCcCcccC
Confidence 34588888887764
No 166
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.04 E-value=4.6 Score=19.48 Aligned_cols=14 Identities=7% Similarity=-0.109 Sum_probs=10.0
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..||+.+.-
T Consensus 11 ~~~~C~~C~k~f~~ 24 (46)
T 2eov_A 11 KPYKCSDCGKSFTW 24 (46)
T ss_dssp CSCBCSSSCCBCSS
T ss_pred CCccCCccChhhCC
Confidence 45888888887653
No 167
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.94 E-value=3.9 Score=18.55 Aligned_cols=13 Identities=8% Similarity=-0.049 Sum_probs=8.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 8 ~~~~C~~C~k~f~ 20 (36)
T 2elr_A 8 KTHLCDMCGKKFK 20 (36)
T ss_dssp SSCBCTTTCCBCS
T ss_pred CCeecCcCCCCcC
Confidence 4477777776553
No 168
>2k3r_A Ribonuclease P protein component 4; PFU RPP21, RNAse P, hydrolase, tRNA processing; NMR {Pyrococcus furiosus} PDB: 2ki7_B
Probab=55.41 E-value=4.5 Score=26.25 Aligned_cols=29 Identities=34% Similarity=0.770 Sum_probs=19.0
Q ss_pred EEcCcCCcc--------eecCCC----CCeecCCCCC--eEEE
Q psy2244 18 KYYLECHFE--------NEIRPR----DPIRCRECGY--RIMY 46 (73)
Q Consensus 18 YiC~~Cg~e--------~~ik~~----d~IRC~~CG~--RILy 46 (73)
-+|..|+.. +.+... -.++|-.||+ |+-|
T Consensus 61 ~~Ck~C~s~LIPG~t~~vri~~~~k~~vv~tCl~Cg~~kR~p~ 103 (123)
T 2k3r_A 61 RYCKKCHAFLVPGINARVRLRQKRMPHIVVKCLECGHIMRYPY 103 (123)
T ss_dssp SBCTTTCCBCCBTTTEEEEEECSSSCEEEEEETTTTEEEEEEC
T ss_pred HhccCCCCEeECCCceEEEEecCCccEEEEECCCCCCEEEEec
Confidence 378888764 333333 3578999998 6666
No 169
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.35 E-value=7.3 Score=18.80 Aligned_cols=15 Identities=7% Similarity=-0.181 Sum_probs=10.7
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ep2_A 10 EKPYECSICGKSFTK 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCcCCCCCCcccCC
Confidence 345888888887653
No 170
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.32 E-value=5.4 Score=19.31 Aligned_cols=15 Identities=13% Similarity=-0.086 Sum_probs=10.6
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2en6_A 10 EKPYGCNECGKTFSQ 24 (46)
T ss_dssp SCCEEETTTTEEESS
T ss_pred CcCeECCCCCcccCc
Confidence 345888888877653
No 171
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=55.31 E-value=6.7 Score=18.86 Aligned_cols=15 Identities=7% Similarity=-0.115 Sum_probs=10.6
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2el4_A 10 VKPYGCSQCAKTFSL 24 (46)
T ss_dssp CCSEECSSSSCEESS
T ss_pred CCceECCCCCchhCC
Confidence 345888889887653
No 172
>3u50_C Telomerase-associated protein 82; TEB1, processivity factor, DNA BIND protein; 2.50A {Tetrahymena thermophila}
Probab=55.29 E-value=5.5 Score=27.36 Aligned_cols=28 Identities=11% Similarity=-0.109 Sum_probs=22.1
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
...-|..|.+.+.....+.-+|..|+.-
T Consensus 41 ~Y~ACp~CnKKV~~~~~g~~~CekC~~~ 68 (172)
T 3u50_C 41 YYYRCTCQGKSVLKYHGDSFFCESCQQF 68 (172)
T ss_dssp EEEECTTSCCCEEEETTTEEEETTTTEE
T ss_pred EehhchhhCCEeeeCCCCeEECCCCCCC
Confidence 5567999999987555677899999975
No 173
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.76 E-value=7.4 Score=18.84 Aligned_cols=14 Identities=14% Similarity=-0.050 Sum_probs=10.3
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..||+.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2emf_A 10 GKHFECTECGKAFT 23 (46)
T ss_dssp SCCEECSSSCCEES
T ss_pred CCCeECCCCCchhC
Confidence 34588888888765
No 174
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=59.57 E-value=2.6 Score=17.90 Aligned_cols=13 Identities=8% Similarity=-0.159 Sum_probs=8.9
Q ss_pred EEEcCcCCcceec
Q psy2244 17 EKYYLECHFENEI 29 (73)
Q Consensus 17 ~YiC~~Cg~e~~i 29 (73)
.|.|..||..+.-
T Consensus 2 p~~C~~C~k~f~~ 14 (26)
T 2lvu_A 2 PYVCERCGKRFVQ 14 (26)
Confidence 3778888776543
No 175
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=54.49 E-value=4.1 Score=19.83 Aligned_cols=15 Identities=20% Similarity=0.053 Sum_probs=10.7
Q ss_pred eEEEcCcCCcceecC
Q psy2244 16 IEKYYLECHFENEIR 30 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik 30 (73)
..|.|..|++.+.-+
T Consensus 11 k~~~C~~C~k~f~~~ 25 (46)
T 2ely_A 11 KPFKCVECGKGFSRR 25 (46)
T ss_dssp CSBCCSSSCCCBSST
T ss_pred CCcccCccCcccCCH
Confidence 458888888876543
No 176
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=54.34 E-value=7.2 Score=27.51 Aligned_cols=24 Identities=29% Similarity=0.437 Sum_probs=14.2
Q ss_pred EEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
.-.|.-|...+.. .++|++|++++
T Consensus 180 i~~C~iC~~iv~~----g~~C~~C~~~~ 203 (238)
T 3nw0_A 180 VKICNICHSLLIQ----GQSCETCGIRM 203 (238)
T ss_dssp CCBCTTTCSBCSS----CEECSSSCCEE
T ss_pred CCcCcchhhHHhC----CcccCccChHH
Confidence 3456666666552 36676666654
No 177
>2y69_F Cytochrome C oxidase subunit 5B; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=53.78 E-value=9.5 Score=25.54 Aligned_cols=18 Identities=22% Similarity=0.613 Sum_probs=13.5
Q ss_pred cCCCCCeecCCCCCeEEE
Q psy2244 29 IRPRDPIRCRECGYRIMY 46 (73)
Q Consensus 29 ik~~d~IRC~~CG~RILy 46 (73)
+..+.+-||++||+-...
T Consensus 105 L~kg~p~RCpeCG~~fkL 122 (129)
T 2y69_F 105 LHKGEAQRCPSCGTHYKL 122 (129)
T ss_dssp EESSSCEECTTTCCEEEE
T ss_pred EeCCCceeCCCCCeEEEE
Confidence 556778999999985433
No 178
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.55 E-value=9.6 Score=17.35 Aligned_cols=13 Identities=15% Similarity=-0.005 Sum_probs=8.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|+..+.
T Consensus 8 k~~~C~~C~k~f~ 20 (37)
T 2elp_A 8 RAMKCPYCDFYFM 20 (37)
T ss_dssp CCEECSSSSCEEC
T ss_pred CCeECCCCChhhc
Confidence 3477777766654
No 179
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.86 E-value=4.8 Score=19.41 Aligned_cols=13 Identities=15% Similarity=-0.082 Sum_probs=9.6
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2eq4_A 11 KLYNCKECGKSFS 23 (46)
T ss_dssp CCCCBTTTTBCCS
T ss_pred CCeECCCCCCccC
Confidence 4588888887755
No 180
>2riq_A Poly [ADP-ribose] polymerase 1; Zn-binding domain, Zn ribbon, Zn finger, ADP-ribosylation, D damage, DNA repair, DNA-binding, glycosyltransferase; 1.70A {Homo sapiens} PDB: 2jvn_A
Probab=52.54 E-value=4.4 Score=27.86 Aligned_cols=25 Identities=20% Similarity=0.359 Sum_probs=18.5
Q ss_pred CCCeecCCCCCeEEEeeeCCeeEEEeeccCCCC
Q psy2244 32 RDPIRCRECGYRIMYKKRTKRCILYFKPQTGGF 64 (73)
Q Consensus 32 ~d~IRC~~CG~RILyKkRt~r~vqf~~~~~~~~ 64 (73)
+..-+||.|+.++.|.. ..|.|.||
T Consensus 76 Gal~~CP~C~G~l~y~~--------~~Y~C~G~ 100 (160)
T 2riq_A 76 GALLPCEECSGQLVFKS--------DAYYCTGD 100 (160)
T ss_dssp CEECCCTTTCCCEEEET--------TEEEECCE
T ss_pred CCCCCCCCCCCEEEEeC--------CeEEECCC
Confidence 44568999999999964 45567775
No 181
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=52.42 E-value=12 Score=22.15 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=19.8
Q ss_pred CcceEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
|....-.|..|++.+.+-. -.-.|+.||.
T Consensus 17 pd~~~~~C~~C~~~Fs~~~-RrHHCR~CG~ 45 (84)
T 1z2q_A 17 EDEDAPACNGCGCVFTTTV-RRHHCRNCGY 45 (84)
T ss_dssp CTTTCCBCTTTCCBCCTTS-CCEECTTTCC
T ss_pred cCCCCCCCcCcCCccccch-hcccccCCCc
Confidence 3334557999999988753 3466777775
No 182
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=52.30 E-value=4.6 Score=20.57 Aligned_cols=19 Identities=16% Similarity=0.081 Sum_probs=13.4
Q ss_pred CCcceEEEcCcCCcceecC
Q psy2244 12 LPGDIEKYYLECHFENEIR 30 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~ik 30 (73)
+..+..|.|..||+.+.-+
T Consensus 3 ~~gekp~~C~~CgK~F~~~ 21 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSP 21 (36)
T ss_dssp SSSCCCCEETTTTEECSCH
T ss_pred CCCccCeECCCCCCccCCH
Confidence 3445679999998887543
No 183
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=52.27 E-value=6.6 Score=17.50 Aligned_cols=12 Identities=8% Similarity=-0.164 Sum_probs=8.2
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
.|.|..|++.+.
T Consensus 7 ~~~C~~C~k~f~ 18 (35)
T 2elx_A 7 GYVCALCLKKFV 18 (35)
T ss_dssp SEECSSSCCEES
T ss_pred CeECCCCcchhC
Confidence 477777777654
No 184
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.61 E-value=5.2 Score=19.37 Aligned_cols=13 Identities=8% Similarity=0.008 Sum_probs=9.8
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2epz_A 11 KPFDCIDCGKAFS 23 (46)
T ss_dssp CSBCCTTTCCCBS
T ss_pred CCeECCCCCceeC
Confidence 4588888888765
No 185
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=51.49 E-value=11 Score=23.23 Aligned_cols=29 Identities=21% Similarity=0.500 Sum_probs=21.4
Q ss_pred cCCcceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 11 CLPGDIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
+.+.....+|..|++.+.+- +.+| .||.-
T Consensus 19 ~~~k~~~~RC~~C~kkvgL~---~f~C-rCg~~ 47 (74)
T 1wfp_A 19 DPPKSTATRCLSCNKKVGVT---GFKC-RCGST 47 (74)
T ss_dssp CCTTCCCCBCSSSCCBCTTT---CEEC-TTSCE
T ss_pred ccCcccCccchhhcCccccc---ceEe-ccCCE
Confidence 44555668899999888775 6889 68863
No 186
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=51.12 E-value=9.5 Score=28.21 Aligned_cols=27 Identities=22% Similarity=0.261 Sum_probs=21.3
Q ss_pred cceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 14 GDIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 14 ~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
+.-.-.|+-|+.+-... -++|++||..
T Consensus 205 G~R~l~Cs~C~t~W~~~---R~~C~~Cg~~ 231 (309)
T 2fiy_A 205 GLRYLSCSLCACEWHYV---RIKCSHCEES 231 (309)
T ss_dssp CEEEEEETTTCCEEECC---TTSCSSSCCC
T ss_pred CcEEEEeCCCCCEEeec---CcCCcCCCCC
Confidence 33567899999997665 3799999995
No 187
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.05 E-value=3.9 Score=19.76 Aligned_cols=13 Identities=15% Similarity=-0.069 Sum_probs=9.5
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2ytr_A 11 KPYKCNECGKAFS 23 (46)
T ss_dssp CTTCCTTTCCCCS
T ss_pred cCcCCCCCCCccC
Confidence 4488888887754
No 188
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=50.98 E-value=12 Score=28.10 Aligned_cols=30 Identities=17% Similarity=0.465 Sum_probs=20.3
Q ss_pred eEEEcCcCCcceecC--CCCCeecCCCCCeEE
Q psy2244 16 IEKYYLECHFENEIR--PRDPIRCRECGYRIM 45 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik--~~d~IRC~~CG~RIL 45 (73)
..|.|..||.-.... +..+..|++||.+..
T Consensus 243 ~v~~C~~C~~~~~~~~~~~~~~~C~~cg~~~~ 274 (392)
T 3axs_A 243 YIQYCFNCMNREVVTDLYKFKEKCPHCGSKFH 274 (392)
T ss_dssp EEEECTTTCCEEEECCGGGCCSBCTTTCSBCE
T ss_pred eEEECCCCCCeEeecCCCCCCCcCCCCCCccc
Confidence 568899998753221 124578999998653
No 189
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.92 E-value=8.2 Score=18.58 Aligned_cols=15 Identities=13% Similarity=0.014 Sum_probs=10.8
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2ep0_A 10 EKPYKCDVCHKSFRY 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeeCcccCcccCC
Confidence 345889999887653
No 190
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.92 E-value=5.5 Score=19.19 Aligned_cols=13 Identities=15% Similarity=0.010 Sum_probs=9.7
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 11 ~~~~C~~C~k~f~ 23 (46)
T 2eop_A 11 KPHECRECGKSFS 23 (46)
T ss_dssp CSCBCTTTCCBCS
T ss_pred CCeeCCCCCchhC
Confidence 4588888887765
No 191
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=50.75 E-value=8.4 Score=20.45 Aligned_cols=12 Identities=17% Similarity=0.019 Sum_probs=6.6
Q ss_pred EEEcCc--CCccee
Q psy2244 17 EKYYLE--CHFENE 28 (73)
Q Consensus 17 ~YiC~~--Cg~e~~ 28 (73)
.|.|.. |+..+.
T Consensus 38 ~~~C~~~~C~k~f~ 51 (79)
T 2dlk_A 38 SFSCPEPACGKSFN 51 (79)
T ss_dssp CEECSCTTTCCEES
T ss_pred CeECCCCCCcCccC
Confidence 366665 665543
No 192
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=50.68 E-value=5.1 Score=29.28 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=22.8
Q ss_pred cCCcceEEEcCcCCcceecCC--CCCeecCCCCCeE
Q psy2244 11 CLPGDIEKYYLECHFENEIRP--RDPIRCRECGYRI 44 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~--~d~IRC~~CG~RI 44 (73)
+.|+...-+|.+|+..+--+. ...-.||.|+|+-
T Consensus 18 ~~~~~l~~kc~~~~~~~~~~~l~~~~~v~~~~~~~~ 53 (304)
T 2f9y_B 18 SIPEGVWTKCDSCGQVLYRAELERNLEVCPKCDHHM 53 (304)
T ss_dssp -----CEECCTTTCCCEETTHHHHTTTBCTTTCCBC
T ss_pred CCCHHHHHhhhhccchhhHHHHHHHhCCCCCCCCCC
Confidence 567778899999999876663 3447899999964
No 193
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=50.37 E-value=10 Score=20.07 Aligned_cols=22 Identities=27% Similarity=0.682 Sum_probs=13.9
Q ss_pred EEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
-.|.-|+...- .+.+|..|+..
T Consensus 15 t~C~~C~~~l~----qG~~C~~C~~~ 36 (52)
T 1faq_A 15 AFCDICQKFLL----NGFRCQTCGYK 36 (52)
T ss_dssp EECTTSSSEEC----SEEECTTTTCC
T ss_pred cCCCCcccccc----cCCEeCCCCCe
Confidence 35667766543 56777777754
No 194
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.27 E-value=6.2 Score=19.14 Aligned_cols=14 Identities=14% Similarity=-0.024 Sum_probs=10.1
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ytq_A 10 EKPYGCSECGKAFS 23 (46)
T ss_dssp CCSCBCSSSCCBCS
T ss_pred CCCcCCCccChhhC
Confidence 34588888887765
No 195
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=50.21 E-value=9 Score=22.67 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=15.4
Q ss_pred EEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
+-.|..||.-.. .-.||.||..+
T Consensus 5 mr~C~~Cg~YTL-----k~~CP~CG~~t 27 (60)
T 2aus_D 5 IRKCPKCGRYTL-----KETCPVCGEKT 27 (60)
T ss_dssp CEECTTTCCEES-----SSBCTTTCSBC
T ss_pred ceECCCCCCEEc-----cccCcCCCCcc
Confidence 357888877664 24588888643
No 196
>4bbr_M Transcription initiation factor IIB; RNA polymerase, TFIIB; 3.40A {Saccharomyces cerevisiae} PDB: 3k7a_M 4bbs_M
Probab=50.20 E-value=5.2 Score=29.50 Aligned_cols=27 Identities=26% Similarity=0.459 Sum_probs=17.4
Q ss_pred eEEEcCcCCc---ceecC-CCCCeecCCCCC
Q psy2244 16 IEKYYLECHF---ENEIR-PRDPIRCRECGY 42 (73)
Q Consensus 16 v~YiC~~Cg~---e~~ik-~~d~IRC~~CG~ 42 (73)
+.++|.+||. .+-.+ ....+-|.+||.
T Consensus 20 ~~~~Cp~C~~~~~~lv~D~~~G~~vC~~CGl 50 (345)
T 4bbr_M 20 IVLTCPECKVYPPKIVERFSEGDVVCALCGL 50 (345)
T ss_dssp --CCCSSCCCSSCCEEEEGGGTEEEETTTCB
T ss_pred cCCcCCCCCCCCCceeEECCCCcEEeCCCCC
Confidence 4568999996 22122 345589999995
No 197
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=49.82 E-value=7.9 Score=17.37 Aligned_cols=13 Identities=8% Similarity=-0.230 Sum_probs=8.6
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 6 k~~~C~~C~k~f~ 18 (35)
T 1srk_A 6 RPFVCRICLSAFT 18 (35)
T ss_dssp SCEECSSSCCEES
T ss_pred cCeeCCCCCcccC
Confidence 3477777777654
No 198
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.77 E-value=5.4 Score=19.29 Aligned_cols=14 Identities=7% Similarity=-0.273 Sum_probs=10.0
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2eoq_A 10 EKPFKCDICGKSFC 23 (46)
T ss_dssp SCSCCCSSSCCCCS
T ss_pred CCCcCCCcCCchhC
Confidence 34588888887764
No 199
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=49.62 E-value=13 Score=20.79 Aligned_cols=25 Identities=16% Similarity=0.401 Sum_probs=16.2
Q ss_pred EcCcCCcceecCCCCCeecCCCCCe
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.|..|+..+---.....+|..|+..
T Consensus 22 ~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 22 FCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp BCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred cccccChhhhccCceeeECCCCCCe
Confidence 5777877653223467888888764
No 200
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=49.54 E-value=9.6 Score=27.73 Aligned_cols=26 Identities=23% Similarity=0.429 Sum_probs=17.9
Q ss_pred EEEcCcCCcceecCC-----------CCCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRP-----------RDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~-----------~d~IRC~~CG~R 43 (73)
...|..|+...+.+. ...-+|+ ||..
T Consensus 154 ~~~C~~C~~~~~~~~~~~~~~~~~~~~~~P~C~-Cgg~ 190 (290)
T 3u31_A 154 EAVCCTCNKIVKLNKIMLQKTSHFMHQLPPECP-CGGI 190 (290)
T ss_dssp EEEETTTCCEEECCTGGGSTTSSTTTSSSCBCT-TSCB
T ss_pred cceeCCCCCcCChhHhhhcccccccccCCCCCC-CCCE
Confidence 458999998765432 1246899 9974
No 201
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=49.50 E-value=4.5 Score=17.11 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=8.0
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||..+.
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1klr_A 3 YQCQYCEFRSA 13 (30)
T ss_dssp CCCSSSSCCCS
T ss_pred ccCCCCCCccC
Confidence 67888877654
No 202
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.10 E-value=10 Score=17.00 Aligned_cols=13 Identities=8% Similarity=0.243 Sum_probs=8.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|+..+.
T Consensus 8 k~~~C~~C~k~f~ 20 (36)
T 2elt_A 8 KPYKCPQCSYASA 20 (36)
T ss_dssp CSEECSSSSCEES
T ss_pred CCCCCCCCCcccC
Confidence 3477777776653
No 203
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=49.03 E-value=5.1 Score=17.16 Aligned_cols=11 Identities=9% Similarity=-0.170 Sum_probs=7.9
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||..+.
T Consensus 3 ~~C~~C~k~f~ 13 (30)
T 1paa_A 3 YACGLCNRAFT 13 (30)
T ss_dssp SBCTTTCCBCS
T ss_pred cCCcccCcccC
Confidence 67888877654
No 204
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=49.02 E-value=6.1 Score=19.17 Aligned_cols=15 Identities=13% Similarity=-0.035 Sum_probs=10.4
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2emk_A 10 EKPYECKECGKAFSQ 24 (46)
T ss_dssp SCSCBCSSSCCBCSC
T ss_pred CCceECCCCCchhCC
Confidence 345888888877653
No 205
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=48.89 E-value=8.6 Score=23.07 Aligned_cols=29 Identities=17% Similarity=0.469 Sum_probs=20.4
Q ss_pred cCCcceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 11 CLPGDIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 11 ~~~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
+.+....-+|..|++.+.+- +.+| .||.-
T Consensus 9 ~~~~~~~~rC~~C~kkvgl~---~f~C-rCg~~ 37 (64)
T 1wg2_A 9 SRPVRPNNRCFSCNKKVGVM---GFKC-KCGST 37 (64)
T ss_dssp SCCSCCSCSCTTTCCCCTTS---CEEC-TTSCE
T ss_pred CCCCCcCCcChhhCCccccc---CeEe-ecCCE
Confidence 34444567899998887664 6888 68864
No 206
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=48.47 E-value=5.1 Score=16.95 Aligned_cols=11 Identities=9% Similarity=-0.140 Sum_probs=7.7
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||..+.
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 1ard_A 3 FVCEVCTRAFA 13 (29)
T ss_dssp CBCTTTCCBCS
T ss_pred eECCCCCcccC
Confidence 67888877653
No 207
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=47.97 E-value=6 Score=19.12 Aligned_cols=14 Identities=14% Similarity=0.083 Sum_probs=10.0
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2em0_A 10 EKTWKCRECDMCFS 23 (46)
T ss_dssp CCCCCCSSSCCCCS
T ss_pred CcCeECCCCCcccC
Confidence 34588888887754
No 208
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=47.94 E-value=6.8 Score=30.53 Aligned_cols=29 Identities=24% Similarity=0.369 Sum_probs=22.4
Q ss_pred ceEEEcCc--CCcceecC--------CCCCeecCCCCCe
Q psy2244 15 DIEKYYLE--CHFENEIR--------PRDPIRCRECGYR 43 (73)
Q Consensus 15 ~v~YiC~~--Cg~e~~ik--------~~d~IRC~~CG~R 43 (73)
...|.|.. ||.++... ...+..||.|+.+
T Consensus 133 ~~~~~C~~~~C~~~~~~~~~~~~~~~~~~p~~C~~C~~~ 171 (595)
T 3f9v_A 133 KATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKP 171 (595)
T ss_dssp ECCCEEESSSCCCBCCSSCSSCCCSSCCCCSSCTTTCCC
T ss_pred EEEEEecCCCCCCEEEEEeccccCCcccCCCcCCCCCCC
Confidence 46799999 99886554 2367899999985
No 209
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.79 E-value=14 Score=21.74 Aligned_cols=25 Identities=16% Similarity=0.284 Sum_probs=13.7
Q ss_pred EcCcCCcceecCCCCCeecCCCCCe
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.|..|+..+---.....+|..|++.
T Consensus 30 ~C~~C~~~lwGl~kqg~~C~~C~~~ 54 (83)
T 2yuu_A 30 FCSVCKDFVWGLNKQGYKCRQCNAA 54 (83)
T ss_dssp CCSSSCCCCCSSSCCEEEETTTCCE
T ss_pred ChhhcChhhccccccccccCCcCCe
Confidence 3666665543223355677777654
No 210
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=47.50 E-value=6.2 Score=16.50 Aligned_cols=11 Identities=9% Similarity=0.114 Sum_probs=7.7
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||..+.
T Consensus 3 ~~C~~C~~~f~ 13 (29)
T 2m0e_A 3 HKCPHCDKKFN 13 (29)
T ss_dssp CCCSSCCCCCC
T ss_pred CcCCCCCcccC
Confidence 67778877654
No 211
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=47.24 E-value=23 Score=22.26 Aligned_cols=29 Identities=21% Similarity=0.241 Sum_probs=22.7
Q ss_pred ceEEEcCcCCcceecCC------CCCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEIRP------RDPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~------~d~IRC~~CG~RI 44 (73)
.-.|-|. ||..+.+.. ...+.|+.|.=.|
T Consensus 21 ~y~ypCr-CGd~F~IteedLe~ge~iv~C~sCSL~I 55 (89)
T 2jr7_A 21 TYFYPCP-CGDNFSITKEDLENGEDVATCPSCSLII 55 (89)
T ss_dssp EEEEECT-TSSEEEEEHHHHHHTCCEEECTTTCCEE
T ss_pred EEEEcCC-CCCEEEECHHHHhCCCEEEECCCCccEE
Confidence 4578895 999988762 3579999999865
No 212
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.12 E-value=5.8 Score=19.11 Aligned_cols=13 Identities=15% Similarity=-0.125 Sum_probs=9.3
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 ~~~~C~~C~k~F~ 23 (46)
T 2eoe_A 11 KPYKCNECGKVFT 23 (46)
T ss_dssp CSSEETTTTEECS
T ss_pred CCeECCCcChhhC
Confidence 4588888887654
No 213
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.03 E-value=6.8 Score=18.92 Aligned_cols=13 Identities=15% Similarity=-0.125 Sum_probs=9.4
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~F~ 23 (46)
T 2ytn_A 11 KPYKCNECGKVFT 23 (46)
T ss_dssp SSCBCTTTCCBCS
T ss_pred cCeECCCCCCeeC
Confidence 4588888887754
No 214
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=46.93 E-value=15 Score=20.68 Aligned_cols=10 Identities=10% Similarity=-0.001 Sum_probs=4.6
Q ss_pred EEcCcCCcce
Q psy2244 18 KYYLECHFEN 27 (73)
Q Consensus 18 YiC~~Cg~e~ 27 (73)
|.|..|+..+
T Consensus 67 ~~C~~C~~~f 76 (119)
T 2jp9_A 67 FQCKTCQRKF 76 (119)
T ss_dssp EECTTTCCEE
T ss_pred ccCCccCchh
Confidence 4444444443
No 215
>1h7b_A Anaerobic ribonucleotide-triphosphate reductase large chain; oxidoreductase, allosteric regulation, substrate specificity; 2.45A {Bacteriophage T4} SCOP: c.7.1.3 PDB: 1h79_A* 1h7a_A* 1h78_A 1hk8_A*
Probab=46.70 E-value=4.6 Score=32.46 Aligned_cols=45 Identities=18% Similarity=0.342 Sum_probs=10.6
Q ss_pred EEEcCcCCcceecCCC-CCeecCCCCCeEEE-eeeCCeeEEEeeccC
Q psy2244 17 EKYYLECHFENEIRPR-DPIRCRECGYRIMY-KKRTKRCILYFKPQT 61 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~-d~IRC~~CG~RILy-KkRt~r~vqf~~~~~ 61 (73)
.=+|.+||..-++... ..-.||.||.+--- -.+-+|+..|+.|..
T Consensus 540 ~~~C~~CGy~~~~~~~~~~~~CP~Cg~~~~~~~~~~~Ri~GYl~~~~ 586 (605)
T 1h7b_A 540 VDKCFTCGSTHEMTPTENGFVCSICGETDPKKMNTIRRTCAYLGNPN 586 (605)
T ss_dssp EEET----------------------------TEEEBCSSSSCBCTT
T ss_pred CccCcccCCcCccCccccCCcCCCCCCCcchhhHHHHHHhhhccCcc
Confidence 3479999987655432 23679999975311 134455566776654
No 216
>1x0t_A Ribonuclease P protein component 4; pyrococcus horikoshii OT3, hydrolase; 1.60A {Pyrococcus horikoshii} PDB: 2zae_B
Probab=46.70 E-value=9 Score=24.57 Aligned_cols=25 Identities=40% Similarity=0.881 Sum_probs=16.2
Q ss_pred EEcCcCCcc--------eecCCC----CCeecCCCCC
Q psy2244 18 KYYLECHFE--------NEIRPR----DPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e--------~~ik~~----d~IRC~~CG~ 42 (73)
-+|..|+.. +.++.+ -.+.|-.||+
T Consensus 66 ~~Ck~C~s~LiPG~t~~vri~~~~~~~vv~tCl~Cg~ 102 (120)
T 1x0t_A 66 RYCKRCHTFLIPGVNARVRLRTKRMPHVVITCLECGY 102 (120)
T ss_dssp SBCTTTCCBCCBTTTEEEEEECSSSCEEEEEETTTCC
T ss_pred HhccCCCCEeECCCceEEEEecCCccEEEEECCCCCC
Confidence 378888664 333333 3578999998
No 217
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.35 E-value=5.9 Score=19.30 Aligned_cols=13 Identities=15% Similarity=0.054 Sum_probs=9.4
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2ytm_A 11 KPYKCMECGKAFG 23 (46)
T ss_dssp CSSSBTTTTBCCS
T ss_pred CCcCCCCCCchhC
Confidence 4588888887755
No 218
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=45.94 E-value=13 Score=25.40 Aligned_cols=28 Identities=21% Similarity=0.309 Sum_probs=17.4
Q ss_pred eEEEcCcCCccee------cC-----CCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFENE------IR-----PRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~------ik-----~~d~IRC~~CG~R 43 (73)
....|.+||...- .+ ..--..|.+||||
T Consensus 136 ~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~ 174 (178)
T 3po3_S 136 DRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNR 174 (178)
T ss_dssp SSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCE
T ss_pred CCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCe
Confidence 3578888876521 11 1233678889886
No 219
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=45.81 E-value=12 Score=21.07 Aligned_cols=25 Identities=36% Similarity=0.623 Sum_probs=15.0
Q ss_pred EcCcCCcceecCCCCCeecCCCCCe
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.|..|+..+---.....+|..|+..
T Consensus 26 ~C~~C~~~l~Gl~~qg~~C~~C~~~ 50 (66)
T 1y8f_A 26 YCYECEGLLWGIARQGMRCTECGVK 50 (66)
T ss_dssp CCTTTCCCCCSSCCEEEEETTTCCE
T ss_pred ChhhcChhhcccCcceeEcCCCCCe
Confidence 4667766553223456778777764
No 220
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=45.81 E-value=17 Score=21.22 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=17.4
Q ss_pred EEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
-.|..|+..+---.....+|..|++.+
T Consensus 35 t~C~~C~~~lwGl~kqG~~C~~C~~~~ 61 (77)
T 2enn_A 35 TFCSVCHEFVWGLNKQGYQCRQCNAAI 61 (77)
T ss_dssp EECSSSCCEECCTTCCEEECSSSCCEE
T ss_pred cCccccChhhccccccccCcCCCCCcC
Confidence 357777766543344678888887654
No 221
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.74 E-value=16 Score=21.73 Aligned_cols=25 Identities=12% Similarity=0.247 Sum_probs=13.3
Q ss_pred EcCcCCcceecCCCCCeecCCCCCe
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.|..|+...---.....+|..|+..
T Consensus 30 ~C~~C~~~l~Gl~kqG~~C~~C~~~ 54 (85)
T 2eli_A 30 FCDHCGSLLYGLIHQGMKCDTCDMN 54 (85)
T ss_dssp BCSSSCCBCCCSSSCEEECSSSCCE
T ss_pred CCcccCccccccccCCCcCCCcCCc
Confidence 3666655543223455666666654
No 222
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=45.73 E-value=11 Score=25.60 Aligned_cols=24 Identities=17% Similarity=0.421 Sum_probs=17.6
Q ss_pred ceEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 15 DIEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
...-+|+.|+++..+.. .|++||.
T Consensus 56 ~~~vlCg~C~~~q~~~~----~C~~Cg~ 79 (143)
T 2dkt_A 56 VKEVQCINCEKLQHAQQ----TCEDCST 79 (143)
T ss_dssp CCCEEESSSCCEECSCS----BCSSSCC
T ss_pred cceeeecccCccccccC----cCCCCCc
Confidence 35678888888887652 7888884
No 223
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=45.32 E-value=10 Score=17.69 Aligned_cols=13 Identities=8% Similarity=-0.064 Sum_probs=9.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 10 ~~~~C~~C~k~f~ 22 (42)
T 2epc_A 10 TPYLCGQCGKSFT 22 (42)
T ss_dssp CCEECSSSCCEES
T ss_pred CCeECCCCCcccC
Confidence 4588888877664
No 224
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=45.22 E-value=12 Score=21.68 Aligned_cols=26 Identities=23% Similarity=0.448 Sum_probs=17.3
Q ss_pred CcceEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
..+..=.|..||... ..---|++||+
T Consensus 26 ~~p~l~~c~~cG~~~----~pH~vc~~CG~ 51 (60)
T 2zjr_Z 26 TAPNLTECPQCHGKK----LSHHICPNCGY 51 (60)
T ss_dssp CCCCCEECTTTCCEE----CTTBCCTTTCB
T ss_pred cCCCceECCCCCCEe----CCceEcCCCCc
Confidence 344555788888773 23367889984
No 225
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=45.05 E-value=13 Score=23.35 Aligned_cols=24 Identities=29% Similarity=0.643 Sum_probs=17.6
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
..-+|..|++.+.+- .+.+|+ ||.
T Consensus 24 ~~~rC~~C~kkvgl~--~~f~Cr-Cg~ 47 (85)
T 1wff_A 24 IMKHCFLCGKKTGLA--TSFECR-CGN 47 (85)
T ss_dssp CCCBCSSSCCBCSSS--SCEECT-TCC
T ss_pred cCccchhhCCeeccc--CCeEcC-CCC
Confidence 446888998887763 458886 876
No 226
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=44.17 E-value=13 Score=25.64 Aligned_cols=27 Identities=11% Similarity=0.074 Sum_probs=12.1
Q ss_pred EEEcCcCCcceecC----CCCCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIR----PRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik----~~d~IRC~~CG~R 43 (73)
...|.+|+...+.+ ..+.-+|+.||..
T Consensus 113 ~~~C~~C~~~~~~~~~~~~~~~p~c~~Cgg~ 143 (235)
T 1s5p_A 113 KVRCSQSGQVLDWTGDVTPEDKCHCCQFPAP 143 (235)
T ss_dssp EEEETTTCCEEECCSCCCSSCCC-------C
T ss_pred EEEeCCCCCcccchhhccCCCCCCCCCCCCe
Confidence 45799999876543 2334577788863
No 227
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=49.80 E-value=4.9 Score=17.17 Aligned_cols=13 Identities=8% Similarity=0.087 Sum_probs=9.1
Q ss_pred EEEcCcCCcceec
Q psy2244 17 EKYYLECHFENEI 29 (73)
Q Consensus 17 ~YiC~~Cg~e~~i 29 (73)
.|.|..||..+.-
T Consensus 3 ~~~C~~C~k~f~~ 15 (30)
T 2lvr_A 3 PYVCIHCQRQFAD 15 (30)
Confidence 4788888877643
No 228
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=49.53 E-value=4.9 Score=17.24 Aligned_cols=13 Identities=8% Similarity=-0.100 Sum_probs=8.8
Q ss_pred EEEcCcCCcceec
Q psy2244 17 EKYYLECHFENEI 29 (73)
Q Consensus 17 ~YiC~~Cg~e~~i 29 (73)
.|.|..||..+.-
T Consensus 2 ~~~C~~C~k~f~~ 14 (29)
T 2lvt_A 2 PCQCVMCGKAFTQ 14 (29)
Confidence 3778888776543
No 229
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=43.36 E-value=15 Score=26.48 Aligned_cols=27 Identities=15% Similarity=0.177 Sum_probs=19.3
Q ss_pred EEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
-.|..|+..+.--.....+|..||..+
T Consensus 358 t~C~~C~~~~~g~~~qg~~C~~C~~~~ 384 (406)
T 2vrw_B 358 TSCKACQMLLRGTFYQGYRCYRCRAPA 384 (406)
T ss_dssp CBCTTTCCBCCSSSSCEEEETTTCCEE
T ss_pred CCCccccchhceeCCCCCCCCCCcCcc
Confidence 468888888753345678899998643
No 230
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=43.09 E-value=6.4 Score=17.94 Aligned_cols=13 Identities=8% Similarity=-0.041 Sum_probs=8.1
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|+..+.
T Consensus 10 k~~~C~~C~k~f~ 22 (37)
T 1p7a_A 10 KPFQCPDCDRSFS 22 (37)
T ss_dssp SSBCCTTTCCCBS
T ss_pred CCccCCCCCcccC
Confidence 3477777776553
No 231
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=42.66 E-value=10 Score=27.54 Aligned_cols=26 Identities=23% Similarity=0.376 Sum_probs=18.3
Q ss_pred EEEcCcCCcc---eecC-CCCCeecCCCCC
Q psy2244 17 EKYYLECHFE---NEIR-PRDPIRCRECGY 42 (73)
Q Consensus 17 ~YiC~~Cg~e---~~ik-~~d~IRC~~CG~ 42 (73)
...|.+||.. +..+ ....+-|.+||.
T Consensus 21 ~~~Cp~Cg~~~~~iv~D~~~G~~vC~~CG~ 50 (345)
T 3k7a_M 21 VLTCPECKVYPPKIVERFSEGDVVCALCGL 50 (345)
T ss_dssp CCCCSTTCCSCCCCCCCSSSCSCCCSSSCC
T ss_pred CCcCcCCCCCCCceEEECCCCCEecCCCCe
Confidence 3479999985 2232 345689999998
No 232
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=42.29 E-value=16 Score=22.18 Aligned_cols=11 Identities=27% Similarity=0.694 Sum_probs=8.7
Q ss_pred eecCCCCCeEE
Q psy2244 35 IRCRECGYRIM 45 (73)
Q Consensus 35 IRC~~CG~RIL 45 (73)
++||.||.-.+
T Consensus 3 M~Cp~Cg~~~~ 13 (133)
T 3o9x_A 3 MKCPVCHQGEM 13 (133)
T ss_dssp CBCTTTSSSBE
T ss_pred cCCCcCCCCce
Confidence 58999998655
No 233
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=42.22 E-value=11 Score=17.52 Aligned_cols=13 Identities=15% Similarity=-0.072 Sum_probs=10.1
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||..+.
T Consensus 5 k~~~C~~C~k~f~ 17 (39)
T 1njq_A 5 RSYTCSFCKREFR 17 (39)
T ss_dssp SSEECTTTCCEES
T ss_pred CceECCCCCcccC
Confidence 3589999988764
No 234
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=42.11 E-value=16 Score=31.47 Aligned_cols=62 Identities=10% Similarity=0.180 Sum_probs=37.6
Q ss_pred ceeccccCCcceE--EEcCcCCcceecCC--------CCCeecCCCCCeEEEeeeCCeeE-EEeeccCCCCCcc
Q psy2244 5 QVLVGKCLPGDIE--KYYLECHFENEIRP--------RDPIRCRECGYRIMYKKRTKRCI-LYFKPQTGGFPKL 67 (73)
Q Consensus 5 ~~l~~~~~~~~v~--YiC~~Cg~e~~ik~--------~d~IRC~~CG~RILyKkRt~r~v-qf~~~~~~~~~~~ 67 (73)
-|+.|.--..|.. |+|.+|....-+.. .+.-.||.||.. |.|-+-.-.- .|+.|.-+..|-+
T Consensus 488 Ay~LgITeVDPl~phy~c~~c~~~ef~~~~~~~~g~dlp~k~cp~cg~~-~~~dg~~LlFERFLnpeR~~~PDI 560 (1041)
T 3f2b_A 488 ATMTEITEVNPLPPHYVCPNCKHSEFFNDGSVGSGFDLPDKNCPRCGTK-YKKDGHDIPFETFLGFKGDKVPDI 560 (1041)
T ss_dssp HHHTTSCSCCCSCSEEECTTTCCEEECCSSCCSCGGGSCCCBCTTTCCB-CEEECCCCCTHHHHTTTSCSCCCE
T ss_pred HHHhcCCCcCCCcccccCccccccccccccccccccCCccccCcccccc-ccccCCCcChhhccCCCCCCCCCc
Confidence 4677777777766 99999976322221 255789999864 4444433221 2666666655544
No 235
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=41.73 E-value=14 Score=21.87 Aligned_cols=29 Identities=14% Similarity=0.270 Sum_probs=19.2
Q ss_pred EcCcCCcceecCC-CCCeecCCCCCeEEEeee
Q psy2244 19 YYLECHFENEIRP-RDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 19 iC~~Cg~e~~ik~-~d~IRC~~CG~RILyKkR 49 (73)
.|..|+....+.. .....|+.|| ..|-.|
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg--~~YPI~ 39 (69)
T 2pk7_A 10 ACPICKGPLKLSADKTELISKGAG--LAYPIR 39 (69)
T ss_dssp CCTTTCCCCEECTTSSEEEETTTT--EEEEEE
T ss_pred eCCCCCCcCeEeCCCCEEEcCCCC--cEecCc
Confidence 5888887766653 4568888886 344444
No 236
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=41.56 E-value=12 Score=25.01 Aligned_cols=28 Identities=14% Similarity=0.253 Sum_probs=21.6
Q ss_pred ceEEEcCc--CCcceecCCCCCeecCCCCC
Q psy2244 15 DIEKYYLE--CHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 15 ~v~YiC~~--Cg~e~~ik~~d~IRC~~CG~ 42 (73)
....-|.. |++.+.....+.-+|..|+.
T Consensus 41 ~~Y~aC~~~~CnKKv~~~~~g~~~CekC~~ 70 (181)
T 1l1o_C 41 CMYQACPTQDCNKKVIDQQNGLYRCEKCDT 70 (181)
T ss_dssp TEEEBCCSTTCCCBCEEETTTEEEETTTTE
T ss_pred EEECCCCchhcCCccccCCCCeEECCCCCC
Confidence 45667998 99988755556689999984
No 237
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.55 E-value=16 Score=20.75 Aligned_cols=13 Identities=8% Similarity=0.123 Sum_probs=9.3
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 18 ~~~~C~~C~k~f~ 30 (115)
T 2dmi_A 18 SKFRCKDCSAAYD 30 (115)
T ss_dssp CSEEBSSSSCEES
T ss_pred CCEECCccCchhc
Confidence 4588888887654
No 238
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=41.50 E-value=4 Score=23.34 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=18.4
Q ss_pred ceEEEcCcCCcceecCC---------CCCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEIRP---------RDPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~---------~d~IRC~~CG~RI 44 (73)
...|.|..|+..+.... ..+..|+.||...
T Consensus 14 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~C~~C~~~f 52 (107)
T 1wjp_A 14 KEVYQCRLCNAKLSSLLEQGSHERLCRNAAVCPYCSLRF 52 (107)
T ss_dssp CCCCBCTTTCCBCSSHHHHHHHHHHHHHSBCCTTTCCCB
T ss_pred CcCeECCCCCCccCCHHHHHHHHHHCCCCccCCCCCCcc
Confidence 34588888877764321 1356788887643
No 239
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.19 E-value=14 Score=17.52 Aligned_cols=14 Identities=7% Similarity=-0.197 Sum_probs=9.7
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..|++.+..
T Consensus 11 k~~~C~~C~k~f~~ 24 (44)
T 2yu5_A 11 NPFKCSKCDRVFTQ 24 (44)
T ss_dssp CSEECSSSSCEESS
T ss_pred CCeECCCCCchhCC
Confidence 45888888777653
No 240
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=41.01 E-value=11 Score=25.44 Aligned_cols=26 Identities=19% Similarity=0.390 Sum_probs=17.8
Q ss_pred EcCcCCcc-eecC---CCCCeecCCCCCeE
Q psy2244 19 YYLECHFE-NEIR---PRDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e-~~ik---~~d~IRC~~CG~RI 44 (73)
+|..|+.. .++. ..-.++|..||.+=
T Consensus 106 lC~~C~sPdT~L~k~~r~~~l~C~ACGa~~ 135 (148)
T 2d74_B 106 ICPVCGSPDTKIIKRDRFHFLKCEACGAET 135 (148)
T ss_dssp SCSSSCCTTCCCCBSSSSBCCCCSSSCCCC
T ss_pred ECCCCCCcCcEEEEeCCEEEEEecCCCCCc
Confidence 68899876 2222 23558999999864
No 241
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, transcription factor, DNA-binding, DNA-directed RNA polymerase; 4.30A {Saccharomyces cerevisiae}
Probab=40.96 E-value=9.5 Score=27.50 Aligned_cols=28 Identities=21% Similarity=0.279 Sum_probs=18.6
Q ss_pred eEEEcCcCCcc---eec-CCCCCeecCCCCCe
Q psy2244 16 IEKYYLECHFE---NEI-RPRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e---~~i-k~~d~IRC~~CG~R 43 (73)
...+|.+||.. +.. .....+-|.+||.=
T Consensus 20 ~~~~CPECGs~~t~IV~D~erGE~VCsdCGLV 51 (197)
T 3k1f_M 20 IVLTCPECKVYPPKIVERFSEGDVVCALCGLV 51 (197)
T ss_dssp CCCCCTTTCCSSCCEEEEGGGTEEEETTTCBB
T ss_pred cCeECcCCCCcCCeEEEeCCCCEEEEcCCCCC
Confidence 34479999872 222 24566889999973
No 242
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=40.81 E-value=23 Score=18.55 Aligned_cols=10 Identities=10% Similarity=-0.061 Sum_probs=4.9
Q ss_pred EEc--CcCCcce
Q psy2244 18 KYY--LECHFEN 27 (73)
Q Consensus 18 YiC--~~Cg~e~ 27 (73)
|.| ..||..+
T Consensus 2 ~~C~~~~C~~~f 13 (85)
T 2j7j_A 2 YVCHFENCGKAF 13 (85)
T ss_dssp EECCSTTCCCEE
T ss_pred ccCCCCCCCccc
Confidence 445 5555443
No 243
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=40.72 E-value=20 Score=20.50 Aligned_cols=13 Identities=15% Similarity=-0.026 Sum_probs=8.0
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|+..+.
T Consensus 33 ~~~~C~~C~~~f~ 45 (124)
T 1ubd_C 33 RVHVCAECGKAFV 45 (124)
T ss_dssp CCEECTTTCCEES
T ss_pred CCeECCCCCchhC
Confidence 3467777766654
No 244
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=40.69 E-value=22 Score=22.63 Aligned_cols=30 Identities=17% Similarity=0.462 Sum_probs=16.1
Q ss_pred EEcCcCCcceecC----------CCCCeecCCCCCeEEEe
Q psy2244 18 KYYLECHFENEIR----------PRDPIRCRECGYRIMYK 47 (73)
Q Consensus 18 YiC~~Cg~e~~ik----------~~d~IRC~~CG~RILyK 47 (73)
..|..|+..+..+ +...+.|++|+..+.++
T Consensus 111 v~C~~C~~~~~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~ 150 (170)
T 3hcs_A 111 MDCPQCQRPFQKFHINIHILKDCPRRQVSCDNCAASMAFE 150 (170)
T ss_dssp EECTTTCCEEEGGGHHHHHHHTCTTCEEECTTTCCEEEGG
T ss_pred eECCCCChHHHHHHHHHHhhhhCCCCCeECCCCCCccCHH
Confidence 4566666554332 23456666666665544
No 245
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=40.36 E-value=14 Score=21.88 Aligned_cols=30 Identities=10% Similarity=0.185 Sum_probs=20.0
Q ss_pred EEcCcCCcceecCC-CCCeecCCCCCeEEEeee
Q psy2244 18 KYYLECHFENEIRP-RDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 18 YiC~~Cg~e~~ik~-~d~IRC~~CG~RILyKkR 49 (73)
-.|..|+....+.. .....|+.|| ..|-.|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg--~~YPI~ 39 (68)
T 2hf1_A 9 LVCPLCKGPLVFDKSKDELICKGDR--LAFPIK 39 (68)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTT--EEEEEE
T ss_pred eECCCCCCcCeEeCCCCEEEcCCCC--cEecCC
Confidence 36888887766653 4668899886 344444
No 246
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.22 E-value=14 Score=17.24 Aligned_cols=14 Identities=14% Similarity=-0.054 Sum_probs=9.7
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 8 ~k~~~C~~C~k~f~ 21 (41)
T 2ept_A 8 QRVYECQECGKSFR 21 (41)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCCCCCCcC
Confidence 34588888877764
No 247
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=40.22 E-value=13 Score=17.84 Aligned_cols=13 Identities=15% Similarity=-0.159 Sum_probs=9.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~F~ 23 (44)
T 2epv_A 11 KPYECNECGKAFI 23 (44)
T ss_dssp CSEECSSSCCEES
T ss_pred cCeECCCCCcccC
Confidence 4588888877754
No 248
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=40.14 E-value=15 Score=21.84 Aligned_cols=29 Identities=14% Similarity=0.259 Sum_probs=18.9
Q ss_pred EcCcCCcceecCC-CCCeecCCCCCeEEEeee
Q psy2244 19 YYLECHFENEIRP-RDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 19 iC~~Cg~e~~ik~-~d~IRC~~CG~RILyKkR 49 (73)
.|..|+....+.. .....|+.|| .-|-.|
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg--~~YPI~ 39 (70)
T 2js4_A 10 VCPVCKGRLEFQRAQAELVCNADR--LAFPVR 39 (70)
T ss_dssp BCTTTCCBEEEETTTTEEEETTTT--EEEEEE
T ss_pred ECCCCCCcCEEeCCCCEEEcCCCC--ceecCC
Confidence 5788887766654 3568888886 344444
No 249
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=39.83 E-value=5.6 Score=18.01 Aligned_cols=11 Identities=9% Similarity=-0.176 Sum_probs=8.3
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||+.+.
T Consensus 3 ~~C~~C~k~f~ 13 (32)
T 2kfq_A 3 FACPACPKRFM 13 (32)
T ss_dssp SSSSSSCTTHH
T ss_pred CCCCCCCcccC
Confidence 77888887654
No 250
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=39.69 E-value=15 Score=21.73 Aligned_cols=23 Identities=9% Similarity=0.003 Sum_probs=16.0
Q ss_pred EcCcCCcceecCC-CCCeecCCCC
Q psy2244 19 YYLECHFENEIRP-RDPIRCRECG 41 (73)
Q Consensus 19 iC~~Cg~e~~ik~-~d~IRC~~CG 41 (73)
.|..|+....+.. .....|+.||
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg 33 (68)
T 2jr6_A 10 VCPVTKGRLEYHQDKQELWSRQAK 33 (68)
T ss_dssp BCSSSCCBCEEETTTTEEEETTTT
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCC
Confidence 5778877766553 4667888886
No 251
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.63 E-value=2.9 Score=24.09 Aligned_cols=30 Identities=17% Similarity=0.422 Sum_probs=21.7
Q ss_pred ceEEEcCcCCccee-cCC------------CCCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENE-IRP------------RDPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~-ik~------------~d~IRC~~CG~RI 44 (73)
...|.|..|++.+. .+. ..+..|..||...
T Consensus 22 ~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F 64 (98)
T 2gqj_A 22 RGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQF 64 (98)
T ss_dssp TSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCC
T ss_pred CCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCcc
Confidence 45699999999886 331 2367899999754
No 252
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=39.59 E-value=21 Score=22.05 Aligned_cols=31 Identities=16% Similarity=0.146 Sum_probs=23.2
Q ss_pred ceEEEcCcCCcceecC-----C-CCCeecCCCCCeEEE
Q psy2244 15 DIEKYYLECHFENEIR-----P-RDPIRCRECGYRIMY 46 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik-----~-~d~IRC~~CG~RILy 46 (73)
.-.|-|. ||..+.+. . ...+.|+.|.-.|..
T Consensus 21 ~y~ypCr-CGd~F~it~edL~~ge~iv~C~sCSL~I~V 57 (83)
T 1yop_A 21 MFTYPCP-CGDRFQIYLDDMFEGEKVAVCPSCSLMIDV 57 (83)
T ss_dssp EEEEEET-TTEEEEEEHHHHHTTCCEEECSSSCCEEEC
T ss_pred EEEEeCC-CCCeEEECHHHHhCCCEEEECCCCccEEEE
Confidence 3578895 99887766 2 357999999986643
No 253
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=39.52 E-value=13 Score=17.40 Aligned_cols=13 Identities=8% Similarity=-0.176 Sum_probs=8.9
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 10 k~~~C~~C~k~f~ 22 (42)
T 2en2_A 10 KPYKCETCGARFV 22 (42)
T ss_dssp CSEECTTTCCEES
T ss_pred CCEeCCCcChhhC
Confidence 3477888877654
No 254
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=39.45 E-value=20 Score=20.67 Aligned_cols=23 Identities=22% Similarity=0.456 Sum_probs=16.9
Q ss_pred EcCcCCcceecCCCCCeecCCCCC
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
.|..|+..+.+-. -.-.|+.||.
T Consensus 13 ~C~~C~~~F~~~~-RrHHCR~CG~ 35 (73)
T 1vfy_A 13 ACMICSKKFSLLN-RKHHCRSCGG 35 (73)
T ss_dssp BCTTTCCBCBTTB-CCEECTTTCC
T ss_pred cccCCCCccCCcc-ccccCCCCCE
Confidence 6999999988653 3467777775
No 255
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.54 E-value=8.6 Score=17.46 Aligned_cols=13 Identities=8% Similarity=-0.125 Sum_probs=8.4
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 8 k~~~C~~C~k~f~ 20 (37)
T 2elo_A 8 RSYSCPVCEKSFS 20 (37)
T ss_dssp CCCEETTTTEECS
T ss_pred CCcCCCCCCCccC
Confidence 3477777776653
No 256
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=38.08 E-value=34 Score=21.06 Aligned_cols=29 Identities=21% Similarity=0.235 Sum_probs=22.3
Q ss_pred ceEEEcCcCCcceecC-----C-CCCeecCCCCCeE
Q psy2244 15 DIEKYYLECHFENEIR-----P-RDPIRCRECGYRI 44 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik-----~-~d~IRC~~CG~RI 44 (73)
.-.|-|. ||..+.+. . ...+.|+.|.-.|
T Consensus 28 ~y~y~Cr-CGd~F~it~edL~~ge~iv~C~sCSL~I 62 (83)
T 1wge_A 28 TYFYPCP-CGDNFAITKEDLENGEDVATCPSCSLII 62 (83)
T ss_dssp EEEECCS-SSSCEEEEHHHHHTTCCEEECTTTCCEE
T ss_pred EEEEeCC-CCCEEEECHHHHhCCCEEEECCCCceEE
Confidence 3568895 99998876 2 2579999999855
No 257
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=37.91 E-value=16 Score=17.47 Aligned_cols=14 Identities=14% Similarity=-0.047 Sum_probs=10.3
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..||+.+.
T Consensus 10 ~~~~~C~~C~k~F~ 23 (46)
T 2emi_A 10 ERHYECSECGKAFI 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCCCCCCCCcccC
Confidence 34588888888765
No 258
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=37.91 E-value=8.5 Score=17.53 Aligned_cols=11 Identities=18% Similarity=-0.067 Sum_probs=8.0
Q ss_pred EEcCcCCccee
Q psy2244 18 KYYLECHFENE 28 (73)
Q Consensus 18 YiC~~Cg~e~~ 28 (73)
|.|..||..+.
T Consensus 3 ~~C~~C~k~F~ 13 (33)
T 1rim_A 3 FACPECPKRFM 13 (33)
T ss_dssp CCCSSSCCCCS
T ss_pred ccCCCCCchhC
Confidence 77888877654
No 259
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=37.80 E-value=16 Score=23.54 Aligned_cols=28 Identities=18% Similarity=0.446 Sum_probs=21.0
Q ss_pred eEEEcCcCCcceecCCCC--CeecCCCCCe
Q psy2244 16 IEKYYLECHFENEIRPRD--PIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d--~IRC~~CG~R 43 (73)
..-+|.-||.++.+.... -|-|.+|++-
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FP 44 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFP 44 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCCh
Confidence 346899999998888543 3778888864
No 260
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=37.64 E-value=26 Score=18.69 Aligned_cols=28 Identities=14% Similarity=0.349 Sum_probs=15.9
Q ss_pred eEEEcC--cCCcceecC-----------CCCCeecCCCCCe
Q psy2244 16 IEKYYL--ECHFENEIR-----------PRDPIRCRECGYR 43 (73)
Q Consensus 16 v~YiC~--~Cg~e~~ik-----------~~d~IRC~~CG~R 43 (73)
..|.|. .|+..+... ...+..|+.||..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~ 74 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA 74 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence 347775 577665322 2245677777753
No 261
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=37.49 E-value=15 Score=17.12 Aligned_cols=13 Identities=15% Similarity=-0.061 Sum_probs=9.4
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 9 k~~~C~~C~k~f~ 21 (42)
T 2el5_A 9 NPYECSECGKAFN 21 (42)
T ss_dssp CSEECSSSCCEES
T ss_pred CCccCCCcChhhC
Confidence 4588888887754
No 262
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=37.20 E-value=22 Score=20.56 Aligned_cols=13 Identities=23% Similarity=0.562 Sum_probs=9.1
Q ss_pred eecCCCCCeEEEe
Q psy2244 35 IRCRECGYRIMYK 47 (73)
Q Consensus 35 IRC~~CG~RILyK 47 (73)
.+||.||.--|..
T Consensus 3 m~Cp~Cg~~~l~~ 15 (78)
T 3ga8_A 3 MKCPVCHQGEMVS 15 (78)
T ss_dssp CBCTTTSSSBEEE
T ss_pred eECCCCCCCeeEe
Confidence 5899999754433
No 263
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=37.14 E-value=15 Score=20.34 Aligned_cols=23 Identities=13% Similarity=0.379 Sum_probs=16.4
Q ss_pred EEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
-.|..|++.+- ...+|.+|+++-
T Consensus 15 t~C~~C~k~i~----~G~kC~~Ck~~c 37 (49)
T 1kbe_A 15 QVCNVCQKSMI----FGVKCKHCRLKC 37 (49)
T ss_dssp CCCSSSCCSSC----CEEEETTTTEEE
T ss_pred cCccccCceeE----CcCCCCCCCCcc
Confidence 35888877764 348899888763
No 264
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=37.14 E-value=12 Score=24.99 Aligned_cols=25 Identities=20% Similarity=0.344 Sum_probs=14.0
Q ss_pred EcCcCCcce-ecC---CCCCeecCCCCCe
Q psy2244 19 YYLECHFEN-EIR---PRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~-~ik---~~d~IRC~~CG~R 43 (73)
+|..|+... ++. ..-.++|..||++
T Consensus 105 lC~~C~sPdT~l~k~~r~~~l~C~ACGa~ 133 (139)
T 3cw2_K 105 ECSTCKSLDTILKKEKKSWYIVCLACGAQ 133 (139)
T ss_dssp SCCSSSSSCCCSCSSCSTTTSSCCC----
T ss_pred ECCCCCCcCcEEEEeCCeEEEEecCCCCC
Confidence 689998762 222 2355899999985
No 265
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=37.05 E-value=19 Score=20.53 Aligned_cols=23 Identities=17% Similarity=0.543 Sum_probs=12.3
Q ss_pred EcCcCCcceecCCCCCeecCCCCC
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
.|.-||..+.+- ....+|.+|+.
T Consensus 21 ~C~~Cg~~i~~g-kq~~kC~dC~~ 43 (61)
T 4b6d_A 21 SCVPCGKRIKFG-KLSLKCRDCRV 43 (61)
T ss_dssp ECTTTCCEECTT-CEEEEESSSSC
T ss_pred ccccccCEEEEe-eEeeECCCCCC
Confidence 466666655321 24566666664
No 266
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.92 E-value=16 Score=17.48 Aligned_cols=14 Identities=14% Similarity=0.017 Sum_probs=10.3
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2ytp_A 10 ERHYECSECGKAFA 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCcCCcccC
Confidence 34588988988765
No 267
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.88 E-value=21 Score=20.24 Aligned_cols=28 Identities=25% Similarity=0.654 Sum_probs=17.1
Q ss_pred EEEcCcCCcceecCC---C------CCeecCCCCCeE
Q psy2244 17 EKYYLECHFENEIRP---R------DPIRCRECGYRI 44 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~---~------d~IRC~~CG~RI 44 (73)
.-+|..|+..+.... . +=-+|..|+..+
T Consensus 15 ~~~C~~C~~~I~~~~v~a~~~~~H~~CF~C~~C~~~L 51 (79)
T 2cor_A 15 KYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCGKEL 51 (79)
T ss_dssp CCBCTTTCCBCCSCCCCCSSSCCCTTTSBCSSSCCBC
T ss_pred CCCCccCCCEecceEEEECcceeCCCCCEeCCCCCcc
Confidence 457888888766321 1 225777887654
No 268
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=36.76 E-value=15 Score=17.24 Aligned_cols=13 Identities=15% Similarity=-0.000 Sum_probs=9.4
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (44)
T 2eof_A 11 KPYECNECQKAFN 23 (44)
T ss_dssp CSEECTTTCCEES
T ss_pred CCeECCCCCcccC
Confidence 4588888887764
No 269
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=36.63 E-value=19 Score=23.97 Aligned_cols=25 Identities=24% Similarity=0.614 Sum_probs=17.1
Q ss_pred EcCcCCcce-ec---CCCCCeecCCCCCe
Q psy2244 19 YYLECHFEN-EI---RPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~-~i---k~~d~IRC~~CG~R 43 (73)
+|..|+... ++ +..-.++|..||++
T Consensus 104 lC~~C~sPdT~l~k~~r~~~l~C~ACGa~ 132 (138)
T 1nee_A 104 ICHECNRPDTRIIREGRISLLKCEACGAK 132 (138)
T ss_dssp HHTCCSSCSSCCEEETTTTEEECSTTSCC
T ss_pred ECCCCCCcCcEEEEcCCeEEEEccCCCCC
Confidence 588997762 22 23456899999985
No 270
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=36.29 E-value=19 Score=24.81 Aligned_cols=25 Identities=16% Similarity=0.207 Sum_probs=18.5
Q ss_pred EEcCcCCcceecCCCCCeecCCCCC
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
=.|-+|+..........+-|+.|+.
T Consensus 11 ~~Cw~C~~~~~~~~~~~~fC~~c~~ 35 (207)
T 3bvo_A 11 PRCWNCGGPWGPGREDRFFCPQCRA 35 (207)
T ss_dssp CBCSSSCCBCCSSCSCCCBCTTTCC
T ss_pred CCCCCCCCCcccccccccccccccc
Confidence 3689999875444566789999985
No 271
>3u5e_m 60S ribosomal protein L40; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_m 4b6a_m 4a18_K 4a19_K 4a1b_K 4a1d_K 4adx_5 3izc_p 3izs_p 3iz5_p 3izr_p
Probab=36.21 E-value=16 Score=22.71 Aligned_cols=24 Identities=25% Similarity=0.526 Sum_probs=18.7
Q ss_pred EEEcCcCCcceecCCCCCeecC--CCCCe
Q psy2244 17 EKYYLECHFENEIRPRDPIRCR--ECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~--~CG~R 43 (73)
..+|.+|++.+..+ ..+|+ .|||-
T Consensus 93 ~~ic~~~~~~~~~~---~~~~~~~~c~~~ 118 (128)
T 3u5e_m 93 KSVCRKCYARLPPR---ATNCRKRKCGHT 118 (128)
T ss_dssp CEEETTTCCEECTT---CSSCSCTTTTSC
T ss_pred eEeeccccccCCch---hhccchhhCCCc
Confidence 47899999988765 47888 59873
No 272
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=36.14 E-value=13 Score=21.15 Aligned_cols=28 Identities=21% Similarity=0.483 Sum_probs=21.6
Q ss_pred EcCcCCcceecCCC-CCeecCC--CCCeEEE
Q psy2244 19 YYLECHFENEIRPR-DPIRCRE--CGYRIMY 46 (73)
Q Consensus 19 iC~~Cg~e~~ik~~-d~IRC~~--CG~RILy 46 (73)
.|..|+..++...+ +-+.|+. |++..-|
T Consensus 8 ~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw 38 (60)
T 1wd2_A 8 ECPKCHVTIEKDGGCNHMVCRNQNCKAEFCW 38 (60)
T ss_dssp CCTTTCCCCSSCCSCCSSSCCSSGGGSCCSS
T ss_pred ECcCCCCeeEeCCCCCcEEECCCCcCCEEee
Confidence 68899999888765 6788988 8875443
No 273
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.88 E-value=15 Score=17.40 Aligned_cols=13 Identities=8% Similarity=0.008 Sum_probs=9.1
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (44)
T 2emb_A 11 KRYECSKCQATFN 23 (44)
T ss_dssp SSEECTTTCCEES
T ss_pred CCeECCCCCCccC
Confidence 3488888877654
No 274
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=35.83 E-value=17 Score=17.31 Aligned_cols=14 Identities=14% Similarity=-0.024 Sum_probs=10.7
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..||+.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2ema_A 10 EKRYKCNECGKVFS 23 (46)
T ss_dssp SCCEECSSSCCEES
T ss_pred CcCcCCCCCcchhC
Confidence 34589999988765
No 275
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.75 E-value=18 Score=17.22 Aligned_cols=14 Identities=14% Similarity=0.033 Sum_probs=9.6
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..|++.+.-
T Consensus 11 k~~~C~~C~k~F~~ 24 (46)
T 2en3_A 11 KPFQCKECGMNFSW 24 (46)
T ss_dssp CSEECSSSCCEESS
T ss_pred CCeeCcccChhhCC
Confidence 45788888777643
No 276
>4gop_C Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=35.67 E-value=31 Score=25.58 Aligned_cols=29 Identities=14% Similarity=0.312 Sum_probs=22.7
Q ss_pred ceEEEcCc--CCcceecCCCCCeecCCCCCe
Q psy2244 15 DIEKYYLE--CHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 15 ~v~YiC~~--Cg~e~~ik~~d~IRC~~CG~R 43 (73)
-...-|.. |++.+.....+.-+|..|+.-
T Consensus 306 ~~Y~aC~~~~C~kkv~~~~~g~~~C~~C~~~ 336 (444)
T 4gop_C 306 LYYTACASEGCNKKVNLDHENNWRCEKCDRS 336 (444)
T ss_dssp CEEEECCSTTCCCBEEECTTSCEEETTTTEE
T ss_pred eEEccCCcccCCCccccCCCccEECCCCCCc
Confidence 45677988 999987665567899999853
No 277
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=35.38 E-value=18 Score=17.22 Aligned_cols=14 Identities=14% Similarity=0.005 Sum_probs=9.8
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eow_A 10 EKPYKCNECGKAFR 23 (46)
T ss_dssp CCCEECTTSCCEES
T ss_pred CCCeeccccCChhc
Confidence 34588888887754
No 278
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=35.33 E-value=25 Score=20.68 Aligned_cols=24 Identities=29% Similarity=0.551 Sum_probs=16.9
Q ss_pred EEcCcCCcceecCCCCCeecCCCCC
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
-.|..|+..+.+-. -.-.|+.||.
T Consensus 20 ~~C~~C~~~Fs~~~-RrHHCR~CG~ 43 (82)
T 2yw8_A 20 THCRQCEKEFSISR-RKHHCRNCGH 43 (82)
T ss_dssp CBCTTTCCBCBTTB-CCEECTTTCC
T ss_pred CcccCcCCcccCcc-ccccCCCCCC
Confidence 36999999988653 3366777774
No 279
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=35.27 E-value=16 Score=18.19 Aligned_cols=13 Identities=8% Similarity=-0.179 Sum_probs=8.9
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 6 kp~~C~~C~k~F~ 18 (48)
T 3iuf_A 6 KPYACDICGKRYK 18 (48)
T ss_dssp SCEECTTTCCEES
T ss_pred cCEECCCcCcccC
Confidence 3577888877654
No 280
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.14 E-value=17 Score=17.43 Aligned_cols=15 Identities=13% Similarity=0.078 Sum_probs=11.4
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2em4_A 10 QRPYECIECGKAFKT 24 (46)
T ss_dssp SSSEECSSSCCEESS
T ss_pred CcCcCCCCCCCccCC
Confidence 345999999988653
No 281
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=35.04 E-value=24 Score=23.88 Aligned_cols=24 Identities=25% Similarity=0.599 Sum_probs=17.0
Q ss_pred EEcCcCCcceecCCCCCeecCCCCC
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
-.|..|+..+.+-. -.-.|+.||.
T Consensus 162 ~~C~~C~~~F~~~~-rrhhCr~CG~ 185 (220)
T 1dvp_A 162 RVCHRCRVEFTFTN-RKHHCRNCGQ 185 (220)
T ss_dssp SBCTTTCCBCCSSS-CCEECTTTCC
T ss_pred CccCCCCCccCCcc-cccccCCcCC
Confidence 47999999987653 3366777765
No 282
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.94 E-value=18 Score=17.15 Aligned_cols=14 Identities=14% Similarity=-0.031 Sum_probs=10.0
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~~~~~C~~C~k~f~ 23 (46)
T 2yrj_A 10 EKPYRCGECGKAFA 23 (46)
T ss_dssp CCCEECSSSCCEES
T ss_pred CCCeECCCCCCccC
Confidence 34588888887765
No 283
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=34.94 E-value=19 Score=17.28 Aligned_cols=13 Identities=8% Similarity=-0.077 Sum_probs=9.5
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2yto_A 11 KPYKCSDCGKAFT 23 (46)
T ss_dssp CCEECSSSCCEES
T ss_pred CCEECcccCCccC
Confidence 4588888887764
No 284
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=34.84 E-value=17 Score=20.28 Aligned_cols=22 Identities=18% Similarity=0.362 Sum_probs=15.4
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCC
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECG 41 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG 41 (73)
..|.|..|+..+ +.-.+|..|.
T Consensus 5 ~~~~Cd~C~~~i----g~R~~C~~C~ 26 (52)
T 1tot_A 5 FVYTCNECKHHV----ETRWHCTVCE 26 (52)
T ss_dssp SCEEETTTTEEE----SSEEEESSSS
T ss_pred CEEECCCCCCCC----cceEEcCCCC
Confidence 458888888773 2348888874
No 285
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=34.77 E-value=26 Score=22.32 Aligned_cols=29 Identities=17% Similarity=0.410 Sum_probs=19.3
Q ss_pred CcceEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
|....-.|..|+..|.+-. -.-.|+.||.
T Consensus 65 ~d~~~~~C~~C~~~Fs~~~-RrHHCR~CG~ 93 (125)
T 1joc_A 65 EDNEVQNCMACGKGFSVTV-RRHHCRQCGN 93 (125)
T ss_dssp CGGGCCBCTTTCCBCCSSS-CCEECTTTCC
T ss_pred cCCCCCCCcCcCCcccccc-ccccCCCCCe
Confidence 3334457999999988643 3366777775
No 286
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.70 E-value=12 Score=17.52 Aligned_cols=13 Identities=8% Similarity=-0.207 Sum_probs=9.1
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 10 k~~~C~~C~k~f~ 22 (42)
T 2eos_A 10 KPYPCEICGTRFR 22 (42)
T ss_dssp CCBCCSSSCCCBS
T ss_pred CCEECCCCCCccC
Confidence 4578888877654
No 287
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=34.41 E-value=17 Score=22.39 Aligned_cols=30 Identities=20% Similarity=0.404 Sum_probs=21.9
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCCeEEEeee
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKkR 49 (73)
...+|..|++.+.+- +.+|+ ||.-.--+-|
T Consensus 24 ~~nRC~~CrKkvgL~---gf~Cr-Cg~~FCs~HR 53 (74)
T 1wfl_A 24 KKNRCFMCRKKVGLT---GFDCR-CGNLFCGLHR 53 (74)
T ss_dssp CTTBCSSSCCBCGGG---CEECT-TSCEECSSSC
T ss_pred cCCcChhhCCccccc---CeecC-CCCEechhcC
Confidence 345899999988875 58999 9976554444
No 288
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=34.06 E-value=18 Score=23.43 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=23.0
Q ss_pred eEEEcCcCCcceecC--------CCCCeecCCCCCeEEE
Q psy2244 16 IEKYYLECHFENEIR--------PRDPIRCRECGYRIMY 46 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik--------~~d~IRC~~CG~RILy 46 (73)
+.|.|..|+..+.-. ..--|+|+.|..+=|.
T Consensus 12 l~FTC~~C~tRs~k~iSk~aY~~GvViv~C~gC~n~HlI 50 (100)
T 2e2z_A 12 IAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLI 50 (100)
T ss_dssp EEEEETTTTEEEEEEEEHHHHHTSEEEEECTTTCCEEES
T ss_pred EEEEccCCCCcchhhcCHHHhhCCEEEEEcCCCccceEe
Confidence 789999998865432 1245899999988654
No 289
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.93 E-value=18 Score=17.12 Aligned_cols=14 Identities=14% Similarity=-0.095 Sum_probs=9.5
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..|++.+.-
T Consensus 11 ~~~~C~~C~k~F~~ 24 (44)
T 2eox_A 11 KSYNCNECGKAFTR 24 (44)
T ss_dssp CCEEETTTTEEESS
T ss_pred CCeECcccCcccCC
Confidence 45788888776643
No 290
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.79 E-value=19 Score=17.19 Aligned_cols=15 Identities=13% Similarity=-0.044 Sum_probs=10.9
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ep3_A 10 EKPYRCAECGKAFTD 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCeECCCCCchhCC
Confidence 345889999887653
No 291
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.62 E-value=19 Score=17.17 Aligned_cols=15 Identities=7% Similarity=-0.137 Sum_probs=10.5
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~~~~~C~~C~k~F~~ 24 (46)
T 2em3_A 10 EKPYECKVCSKAFTQ 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCeECCCCCcccCC
Confidence 345888888877653
No 292
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=33.59 E-value=19 Score=17.25 Aligned_cols=15 Identities=20% Similarity=0.093 Sum_probs=11.4
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2emj_A 10 EKPFECAECGKSFSI 24 (46)
T ss_dssp CCSEECSSSSCEESS
T ss_pred CCCEECCCCCcccCC
Confidence 345999999988653
No 293
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=33.53 E-value=19 Score=17.11 Aligned_cols=14 Identities=14% Similarity=-0.031 Sum_probs=10.0
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2yts_A 10 EKPYICNECGKSFI 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CcCEECCCCChhhC
Confidence 34588888887764
No 294
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=33.29 E-value=12 Score=27.10 Aligned_cols=34 Identities=15% Similarity=0.232 Sum_probs=23.7
Q ss_pred ccCCcceEEEcCcCCcceecCC--CCCeecCCCCCe
Q psy2244 10 KCLPGDIEKYYLECHFENEIRP--RDPIRCRECGYR 43 (73)
Q Consensus 10 ~~~~~~v~YiC~~Cg~e~~ik~--~d~IRC~~CG~R 43 (73)
.+.|+...-+|.+|+..+-.+. ...-.||.|+|+
T Consensus 23 ~~~~~~l~~kc~~~~~~~y~~~l~~~~~v~p~~~~~ 58 (285)
T 2f9i_B 23 NDVPAGIMTKCPKCKKIMYTKELAENLNVCFNCDHH 58 (285)
T ss_dssp ---CCSSEEECTTTCCEEEHHHHHHTTTBCTTTCCB
T ss_pred cCCChHHHHhhHhhCCccchhhhHHhcCcCCCCCCC
Confidence 3577778899999999866542 224689999994
No 295
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.18 E-value=23 Score=16.91 Aligned_cols=14 Identities=7% Similarity=-0.194 Sum_probs=9.6
Q ss_pred eEEEcCcCCcceec
Q psy2244 16 IEKYYLECHFENEI 29 (73)
Q Consensus 16 v~YiC~~Cg~e~~i 29 (73)
..|.|..|++.+.-
T Consensus 11 k~~~C~~C~k~f~~ 24 (46)
T 2eoy_A 11 KCFKCNKCEKTFSC 24 (46)
T ss_dssp CCEECSSSCCEESS
T ss_pred CCEECcCCCCcCCC
Confidence 45888888776643
No 296
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=32.95 E-value=26 Score=19.85 Aligned_cols=23 Identities=30% Similarity=0.628 Sum_probs=15.1
Q ss_pred EcCcCCcceecCCCCCeecC--CCCC
Q psy2244 19 YYLECHFENEIRPRDPIRCR--ECGY 42 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~--~CG~ 42 (73)
.|..|+....... +...|+ .||.
T Consensus 12 ~CP~c~~~L~~~~-~~L~C~~~~c~~ 36 (56)
T 2kpi_A 12 ACPACHAPLEERD-AELICTGQDCGL 36 (56)
T ss_dssp CCSSSCSCEEEET-TEEEECSSSCCC
T ss_pred eCCCCCCcceecC-CEEEcCCcCCCc
Confidence 5777777665555 557777 6754
No 297
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=32.89 E-value=27 Score=22.03 Aligned_cols=28 Identities=4% Similarity=-0.205 Sum_probs=21.0
Q ss_pred CcceEEEcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
..+..+.-..||.++.. ...|.+||..|
T Consensus 109 ~~~~~~~~~~~g~~~~~----~~~~~~~g~~~ 136 (146)
T 2f2e_A 109 ESHVRLVERDSGQPVPR----LQVRAGDGSPL 136 (146)
T ss_dssp CCCCEEEETTTCCBCCC----CCCBCTTSCBC
T ss_pred CCcceeeeCCCCCCCCc----eEEECCCcCCC
Confidence 34567888899987753 48899999854
No 298
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=32.81 E-value=16 Score=15.18 Aligned_cols=11 Identities=9% Similarity=0.009 Sum_probs=8.0
Q ss_pred EEcC--cCCccee
Q psy2244 18 KYYL--ECHFENE 28 (73)
Q Consensus 18 YiC~--~Cg~e~~ 28 (73)
|.|. .||+.+.
T Consensus 3 ~~C~~~~C~k~f~ 15 (29)
T 2ab3_A 3 YVCHFENCGRSFN 15 (29)
T ss_dssp EEECSTTTCEEES
T ss_pred CCCcCCcCcCccC
Confidence 7788 8877654
No 299
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.69 E-value=20 Score=17.03 Aligned_cols=15 Identities=13% Similarity=0.040 Sum_probs=11.4
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ytf_A 10 EKPFECSECQKAFNT 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CCCcCCCCCCcccCC
Confidence 345999999988653
No 300
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=32.65 E-value=20 Score=18.01 Aligned_cols=13 Identities=8% Similarity=-0.189 Sum_probs=8.7
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||..+.
T Consensus 23 k~~~C~~C~k~f~ 35 (54)
T 1yui_A 23 QPATCPICYAVIR 35 (54)
T ss_dssp CCEECTTTCCEES
T ss_pred CCccCCCCCcccC
Confidence 3477777777654
No 301
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.60 E-value=19 Score=17.08 Aligned_cols=13 Identities=15% Similarity=-0.120 Sum_probs=9.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 ~~~~C~~C~k~f~ 23 (46)
T 2eor_A 11 KPYNCEECGKAFI 23 (46)
T ss_dssp CSEECTTTCCEES
T ss_pred cCccCCCCCCCcC
Confidence 4588888877764
No 302
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.53 E-value=12 Score=17.37 Aligned_cols=13 Identities=8% Similarity=-0.136 Sum_probs=8.9
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 10 k~~~C~~C~k~f~ 22 (42)
T 2ytb_A 10 KPYRCDQCGKAFS 22 (42)
T ss_dssp CSBCCTTTTCCBS
T ss_pred CCeeCCCccchhC
Confidence 4577888877654
No 303
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.36 E-value=16 Score=17.51 Aligned_cols=14 Identities=7% Similarity=-0.176 Sum_probs=9.7
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eoz_A 10 EKPYSCNVCGKAFV 23 (46)
T ss_dssp CCSEEETTTTEEES
T ss_pred CCCeECcccChhhC
Confidence 34588888887654
No 304
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=32.23 E-value=25 Score=25.71 Aligned_cols=27 Identities=15% Similarity=0.429 Sum_probs=18.7
Q ss_pred EEEcCc--CCcceecC-------CCCCeecCCCCCe
Q psy2244 17 EKYYLE--CHFENEIR-------PRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~--Cg~e~~ik-------~~d~IRC~~CG~R 43 (73)
...|.+ |+...+.+ ....-+|+.||..
T Consensus 159 ~~~C~~~~C~~~~~~~~~~~~i~~~~~P~C~~Cgg~ 194 (323)
T 1j8f_A 159 TSHCVSASCRHEYPLSWMKEKIFSEVTPKCEDCQSL 194 (323)
T ss_dssp EEEESCTTTCCEECHHHHHHHHHTTCCCBCTTTCCB
T ss_pred eeecCCCccCccccHHHHHHhhccCCCCCCcCCCCc
Confidence 467999 99875421 2344699999974
No 305
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.86 E-value=21 Score=17.09 Aligned_cols=14 Identities=14% Similarity=-0.002 Sum_probs=10.1
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2em2_A 10 EKPFKCKECGKAFR 23 (46)
T ss_dssp CCSEECSSSCCEES
T ss_pred CCCEECCcCCchhC
Confidence 34588888887764
No 306
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.79 E-value=13 Score=17.79 Aligned_cols=13 Identities=15% Similarity=-0.115 Sum_probs=9.6
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2emg_A 11 NPFICSECGKVFT 23 (46)
T ss_dssp CSCBCTTTCCBCS
T ss_pred CCEECCccCcccC
Confidence 4588888887764
No 307
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.67 E-value=21 Score=16.97 Aligned_cols=15 Identities=13% Similarity=-0.091 Sum_probs=10.9
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~~~~~C~~C~k~f~~ 24 (46)
T 2ytk_A 10 EKPYKCNECGKVFTQ 24 (46)
T ss_dssp SCSEECSSSCCEESS
T ss_pred CCCEeCCcCCCccCC
Confidence 345899999887653
No 308
>2gag_D Heterotetrameric sarcosine oxidase delta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_D* 1x31_D* 1vrq_D* 3ad7_D* 3ad8_D* 3ad9_D* 3ada_D*
Probab=31.61 E-value=12 Score=24.11 Aligned_cols=10 Identities=50% Similarity=1.085 Sum_probs=8.0
Q ss_pred CeecCCCCCe
Q psy2244 34 PIRCRECGYR 43 (73)
Q Consensus 34 ~IRC~~CG~R 43 (73)
.|.||.||-|
T Consensus 3 ~I~CP~CG~R 12 (99)
T 2gag_D 3 LIDCPNCGPR 12 (99)
T ss_dssp EEEETTTEEE
T ss_pred EecCCCCCCc
Confidence 4899999943
No 309
>2wfu_B Probable insulin-like peptide 5 B chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster} PDB: 2wfv_B
Probab=31.59 E-value=1.6 Score=22.25 Aligned_cols=19 Identities=16% Similarity=0.002 Sum_probs=15.4
Q ss_pred cceeccccCCcceEEEcCc
Q psy2244 4 SQVLVGKCLPGDIEKYYLE 22 (73)
Q Consensus 4 ~~~l~~~~~~~~v~YiC~~ 22 (73)
|+.|||..|.+...-+|++
T Consensus 2 ~~~lCG~~L~eaL~~vC~~ 20 (26)
T 2wfu_B 2 SLRACGPALMDMLRVACPN 20 (26)
T ss_dssp CBCCCHHHHHHHHHHHCSS
T ss_pred ccchhhHHHHHHHHHHHhc
Confidence 6789999988888777776
No 310
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.55 E-value=22 Score=16.96 Aligned_cols=15 Identities=20% Similarity=0.153 Sum_probs=10.8
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..||+.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2ytj_A 10 EKPYICAECGKAFTI 24 (46)
T ss_dssp CCSEECSSSCCEESS
T ss_pred CcCeECCCCChhhCC
Confidence 345889999887653
No 311
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=31.16 E-value=35 Score=20.49 Aligned_cols=25 Identities=24% Similarity=0.622 Sum_probs=18.0
Q ss_pred EEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 17 EKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
.-.|..|+..+.+-.. .-.|+.||.
T Consensus 20 ~~~C~~C~~~F~~~~R-rhhCr~CG~ 44 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKR-RHHCRACGK 44 (90)
T ss_dssp CCBCTTTCCBCCSSSC-CEECTTTCC
T ss_pred CCcCcCCCCcccchhh-CccccCCCC
Confidence 3569999999886533 367888874
No 312
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=31.09 E-value=17 Score=17.31 Aligned_cols=14 Identities=7% Similarity=-0.111 Sum_probs=9.9
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (45)
T 2epu_A 10 QKPFECTHCGKSFR 23 (45)
T ss_dssp CCSEEETTTTEEES
T ss_pred CcCccCCCCCCccC
Confidence 34588888887754
No 313
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=30.98 E-value=30 Score=26.48 Aligned_cols=26 Identities=15% Similarity=0.222 Sum_probs=17.1
Q ss_pred EcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
.|..|+..+---.....+|..||..+
T Consensus 531 ~C~~C~~~l~gl~~qg~~C~~C~~~v 556 (587)
T 3ky9_A 531 SCKACQMLLRGTFYQGYRCHRCRASA 556 (587)
T ss_dssp BCTTTCSBCCSSSCCEEEETTTCCEE
T ss_pred ccccccccccccccCCcCCCCCCCcc
Confidence 57788776533344668888887644
No 314
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=30.26 E-value=15 Score=17.11 Aligned_cols=13 Identities=15% Similarity=0.015 Sum_probs=8.9
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 9 k~~~C~~C~k~f~ 21 (42)
T 2yte_A 9 KPYSCAECKETFS 21 (42)
T ss_dssp CSCBCTTTCCBCS
T ss_pred CCeECCCCCCccC
Confidence 3477888877654
No 315
>2zkr_2 60S ribosomal protein L37E; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} SCOP: i.1.1.1
Probab=30.13 E-value=20 Score=23.10 Aligned_cols=32 Identities=22% Similarity=0.449 Sum_probs=21.5
Q ss_pred ceEEEcCcCCcceecCCCCCeecCCCCCeEEEeee
Q psy2244 15 DIEKYYLECHFENEIRPRDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKkR 49 (73)
+.--.|..||...- -.+...|-.|||.- .|+|
T Consensus 14 KtH~lCrRCG~~sf--H~qK~~CgkCGYpa-~k~R 45 (97)
T 2zkr_2 14 KTHTLCRRCGSKAY--HLQKSTCGKCGYPA-KRKR 45 (97)
T ss_dssp CCEECCTTTCSSCE--ETTSCCBTTTCTTT-SSCC
T ss_pred CCCCcCCCCCCccC--cCccccCcccCCch-Hhcc
Confidence 45567889988755 23567899999842 4444
No 316
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=29.06 E-value=34 Score=25.58 Aligned_cols=26 Identities=15% Similarity=0.330 Sum_probs=16.6
Q ss_pred EcCcCCcceecCCCCCeecCCCCCeE
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~RI 44 (73)
.|..|+...--......+|..||...
T Consensus 222 ~C~~C~~~l~g~~~qg~~C~~C~~~~ 247 (463)
T 3cxl_A 222 WCEYCANFMWGLIAQGVKCADCGLNV 247 (463)
T ss_dssp BCTTTCCBCCSSSCCEEEETTTCCEE
T ss_pred cchhhhhhhhhHHhcCeeccccCccc
Confidence 47778766532334678888887754
No 317
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=28.98 E-value=28 Score=21.52 Aligned_cols=13 Identities=31% Similarity=0.782 Sum_probs=11.3
Q ss_pred CCCeecCCCCCeE
Q psy2244 32 RDPIRCRECGYRI 44 (73)
Q Consensus 32 ~d~IRC~~CG~RI 44 (73)
.|.|+|-.||..|
T Consensus 53 ~D~V~Cf~C~~~l 65 (94)
T 2poi_A 53 GDTVRCFSCHAAV 65 (94)
T ss_dssp TTCEEETTTCCEE
T ss_pred CCEEEcccCCCEe
Confidence 5889999999866
No 318
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.94 E-value=39 Score=19.87 Aligned_cols=24 Identities=17% Similarity=0.408 Sum_probs=15.0
Q ss_pred EEcCcCCcceecCCCCCeecCCCCC
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
=.|..|+..+.+-.+ .-.|+.||.
T Consensus 15 ~~C~~C~~~F~~~~R-rHHCR~CG~ 38 (84)
T 1x4u_A 15 GNCTGCSATFSVLKK-RRSCSNCGN 38 (84)
T ss_dssp SSCSSSCCCCCSSSC-CEECSSSCC
T ss_pred CcCcCcCCccccchh-hhhhcCCCc
Confidence 368899999876532 244555553
No 319
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=28.84 E-value=22 Score=23.03 Aligned_cols=29 Identities=17% Similarity=0.311 Sum_probs=18.3
Q ss_pred CcceEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
|....-.|..|+..+.+- ...-.|++||.
T Consensus 15 Pd~~~~~C~~C~~~Fs~~-~RkHHCR~CG~ 43 (120)
T 1y02_A 15 PTGLEPSCKSCGAHFANT-ARKQTCLDCKK 43 (120)
T ss_dssp -----CCCTTTCCCCSSG-GGCEECTTTCC
T ss_pred CccccCcccCcCCccccc-cccccCCCCCC
Confidence 444556799999998764 34477888885
No 320
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=28.82 E-value=18 Score=20.22 Aligned_cols=29 Identities=21% Similarity=0.497 Sum_probs=17.7
Q ss_pred Ec-CcCCcceecC----------CCCCeecCCCCCeEEEe
Q psy2244 19 YY-LECHFENEIR----------PRDPIRCRECGYRIMYK 47 (73)
Q Consensus 19 iC-~~Cg~e~~ik----------~~d~IRC~~CG~RILyK 47 (73)
.| ..|+..+..+ +...+.|++|+..+.++
T Consensus 18 ~C~~~C~~~v~r~~l~~H~~~~C~~r~v~C~~C~~~~~~~ 57 (76)
T 2yuc_A 18 PCPNRCPMKLSRRDLPAHLQHDCPKRRLKCEFCGCDFSGE 57 (76)
T ss_dssp BCTTCCSCBCCSSSSTTTTTTSCTTSCCCCSSSCCCCCHH
T ss_pred CCCccccHHhhHhHHHhhCHhhCCCcceECCCCCCccCHH
Confidence 45 4677665433 33567888888776544
No 321
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=28.72 E-value=33 Score=23.61 Aligned_cols=24 Identities=25% Similarity=0.599 Sum_probs=16.8
Q ss_pred EEcCcCCcceecCCCCCeecCCCCC
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
-.|..|+..+.+-.+ .-.|+.||.
T Consensus 165 ~~C~~C~~~F~~~~R-rhHCR~CG~ 188 (226)
T 3zyq_A 165 EECHRCRVQFGVMTR-KHHCRACGQ 188 (226)
T ss_dssp SBCTTTCCBCBTTBC-CEECTTTCC
T ss_pred CCCcCcCCCCCcccc-ccccCCCcC
Confidence 379999999886533 356777764
No 322
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=28.62 E-value=51 Score=16.51 Aligned_cols=24 Identities=21% Similarity=0.511 Sum_probs=16.4
Q ss_pred eEEEcCcCCcceecCCCCCeecCCCCC
Q psy2244 16 IEKYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
-..+|..|+..+--+. ..|-.||-
T Consensus 4 gDW~C~~C~~~Nfa~r---~~C~~C~~ 27 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKR---LKCFRCGA 27 (32)
T ss_dssp SEEECTTTCCEEETTC---CBCTTTCC
T ss_pred CCCCcCcCcCCcChhc---ceecCCCC
Confidence 4567888988876654 55666663
No 323
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.47 E-value=18 Score=17.30 Aligned_cols=14 Identities=14% Similarity=-0.128 Sum_probs=10.0
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2em6_A 10 EKCYKCDVCGKEFS 23 (46)
T ss_dssp CCCCBCSSSCCBCS
T ss_pred CCCeECCCCCcccC
Confidence 34588888887764
No 324
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=28.37 E-value=18 Score=22.39 Aligned_cols=34 Identities=15% Similarity=0.228 Sum_probs=23.9
Q ss_pred cceEEEcCcCCcc--eecC-----CCCCeecCCCCCeEEEe
Q psy2244 14 GDIEKYYLECHFE--NEIR-----PRDPIRCRECGYRIMYK 47 (73)
Q Consensus 14 ~~v~YiC~~Cg~e--~~ik-----~~d~IRC~~CG~RILyK 47 (73)
-+..+.|.-|+.+ +..+ ....+.|..||-+--++
T Consensus 20 L~t~F~CPfCnh~~sV~vkidk~~~~g~l~C~~Cg~~~~~~ 60 (85)
T 1wii_A 20 LETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEFQTP 60 (85)
T ss_dssp CSSCCCCTTTCCSSCEEEEEETTTTEEEEEESSSCCEEEEE
T ss_pred CCCeEcCCCCCCCCeEEEEEEccCCEEEEEcccCCCeEEec
Confidence 3467899999888 3322 23669999999865543
No 325
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=28.31 E-value=17 Score=17.33 Aligned_cols=14 Identities=14% Similarity=-0.052 Sum_probs=9.9
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2enf_A 10 EKPYKCNECGKVFT 23 (46)
T ss_dssp CCSCBCSSSCCBCS
T ss_pred CcCeECCCCCcccC
Confidence 34588888887754
No 326
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=28.22 E-value=17 Score=27.04 Aligned_cols=32 Identities=22% Similarity=0.523 Sum_probs=17.1
Q ss_pred EcCcCCcc--eecC---CCCCeecCCCCCeEEEeeeC
Q psy2244 19 YYLECHFE--NEIR---PRDPIRCRECGYRIMYKKRT 50 (73)
Q Consensus 19 iC~~Cg~e--~~ik---~~d~IRC~~CG~RILyKkRt 50 (73)
.|..||.. .... +...--|++|+-.-=.|-+.
T Consensus 36 yCPnCG~~~l~~f~nN~PVaDF~C~~C~EeyELKSk~ 72 (257)
T 4esj_A 36 YCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKK 72 (257)
T ss_dssp CCTTTCCSSCEEC----CCCEEECTTTCCEEEEEEEE
T ss_pred cCCCCCChhhhhccCCCcccccccCCcchhheecccc
Confidence 37777774 2333 23335577777665555443
No 327
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=28.15 E-value=29 Score=20.47 Aligned_cols=30 Identities=3% Similarity=-0.134 Sum_probs=19.1
Q ss_pred EEcCcCCcceecCC-CCCeecCCCCCeEEEeee
Q psy2244 18 KYYLECHFENEIRP-RDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 18 YiC~~Cg~e~~ik~-~d~IRC~~CG~RILyKkR 49 (73)
-.|..|+....... .....|+.|| ..|-.|
T Consensus 11 L~CP~ck~~L~~~~~~g~LvC~~c~--~~YPI~ 41 (67)
T 2jny_A 11 LACPKDKGPLRYLESEQLLVNERLN--LAYRID 41 (67)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTT--EEEEEE
T ss_pred hCCCCCCCcCeEeCCCCEEEcCCCC--ccccCC
Confidence 35778877766553 4567888875 445444
No 328
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A
Probab=27.62 E-value=29 Score=26.44 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=17.5
Q ss_pred cCcCCcceecCCCCCeecCCCCCeEEEeee
Q psy2244 20 YLECHFENEIRPRDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 20 C~~Cg~e~~ik~~d~IRC~~CG~RILyKkR 49 (73)
|-.||...+......-+|..||.++.++..
T Consensus 171 ce~cg~~~~~~~l~~~~~~~~g~~~~~~~~ 200 (560)
T 3h99_A 171 CEVCGATYSPTELIEPKSVVSGATPVMRDS 200 (560)
T ss_dssp CTTTCCBCCGGGCEEEEETTTCCCCEEEEE
T ss_pred hhhccccCChhhhcCCccccCCCCceEEec
Confidence 334444443333334678889998886543
No 329
>1nui_A DNA primase/helicase; zinc-biding domain, toprim fold, DNA replication, DNA-direct polymerase, primosome, late protein, ATP-binding; HET: DNA; 2.90A {Enterobacteria phage T7} SCOP: e.13.1.2 g.41.3.2
Probab=27.61 E-value=34 Score=23.22 Aligned_cols=26 Identities=15% Similarity=0.161 Sum_probs=17.1
Q ss_pred EEcCcCCcc--eecCCCCCeecCCCCCe
Q psy2244 18 KYYLECHFE--NEIRPRDPIRCRECGYR 43 (73)
Q Consensus 18 YiC~~Cg~e--~~ik~~d~IRC~~CG~R 43 (73)
-.|..||.. +.+.......|-+||+.
T Consensus 15 ~~CP~Cg~~d~~~~~~dg~~~C~~Cg~~ 42 (255)
T 1nui_A 15 IPCDNCGSSDGNSLFSDGHTFCYVCEKW 42 (255)
T ss_dssp ECCSSSCCSSCEEEETTSCEEETTTCCE
T ss_pred CcCCCCCCCCCceEeCCCCeecccCCCc
Confidence 468899873 22222235999999985
No 330
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.60 E-value=19 Score=17.27 Aligned_cols=14 Identities=14% Similarity=-0.097 Sum_probs=9.7
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2en9_A 10 KKLFKCNECKKTFT 23 (46)
T ss_dssp SCCCBCTTTCCBCS
T ss_pred CCCEECCccCcccC
Confidence 34588888887654
No 331
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=27.33 E-value=20 Score=17.18 Aligned_cols=16 Identities=6% Similarity=-0.139 Sum_probs=11.8
Q ss_pred ceEEEcCcCCcceecC
Q psy2244 15 DIEKYYLECHFENEIR 30 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik 30 (73)
...|.|..|++.+.-+
T Consensus 10 ~k~~~C~~C~k~F~~~ 25 (46)
T 2enh_A 10 EKPYECDVCRKAFSHH 25 (46)
T ss_dssp SSSCBCTTTCCBCSSS
T ss_pred CCCcCCCCcCchhCCH
Confidence 3459999999886543
No 332
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=27.29 E-value=39 Score=20.32 Aligned_cols=13 Identities=23% Similarity=0.989 Sum_probs=6.8
Q ss_pred CeecCCCCCeEEE
Q psy2244 34 PIRCRECGYRIMY 46 (73)
Q Consensus 34 ~IRC~~CG~RILy 46 (73)
.+.||.||.-+.+
T Consensus 9 ~~~CP~Cgkp~~W 21 (68)
T 1lv3_A 9 TVNCPTCGKTVVW 21 (68)
T ss_dssp EEECTTTCCEEEC
T ss_pred cCcCCCCCCcccc
Confidence 3455555555543
No 333
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.90 E-value=14 Score=21.46 Aligned_cols=25 Identities=16% Similarity=0.397 Sum_probs=12.1
Q ss_pred EcCcCCcceecCCCCCeecCCCCCe
Q psy2244 19 YYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 19 iC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.|..|+...---.....+|..|+..
T Consensus 30 ~C~~C~~~lwGl~kqG~~C~~C~~~ 54 (74)
T 2db6_A 30 FCDVCARMIVLNNKFGLRCKNCKTN 54 (74)
T ss_dssp ECSSSCCEECHHHHEEEEESSSCCE
T ss_pred CchhcChhhccccCCccccCCCCCc
Confidence 3556655432112245666666543
No 334
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.85 E-value=16 Score=17.17 Aligned_cols=13 Identities=15% Similarity=-0.113 Sum_probs=8.8
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (44)
T 2eoj_A 11 NPYECCECGKVFS 23 (44)
T ss_dssp CSCEETTTTEECS
T ss_pred cCeeCCCCCCccC
Confidence 3478888877654
No 335
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.75 E-value=19 Score=17.14 Aligned_cols=14 Identities=14% Similarity=0.002 Sum_probs=10.2
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..||+.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (47)
T 2epx_A 10 KKPYECIECGKAFI 23 (47)
T ss_dssp CCSBCCSSSCCCBS
T ss_pred CCCEECCccCchhC
Confidence 34588989988754
No 336
>2nn6_I 3'-5' exoribonuclease CSL4 homolog; RNA, exosome, PM/SCL, phosphorolytic, hydrolase/transferase complex; 3.35A {Homo sapiens} SCOP: b.40.4.5 b.84.4.2
Probab=26.71 E-value=24 Score=24.26 Aligned_cols=28 Identities=4% Similarity=-0.078 Sum_probs=17.4
Q ss_pred ceEEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 15 DIEKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.+.-.|.. |........+.++||+||..
T Consensus 167 Vv~A~c~~-g~~m~~~~~~~m~cp~cg~~ 194 (209)
T 2nn6_I 167 VVVAHSES-GIQMVPISWCEMQCPKTHTK 194 (209)
T ss_dssp ECCCBCSS-SCBCEEEETTEEECTTTTCC
T ss_pred EEEEEcCC-CCEEEEccCCEEECCCCCCE
Confidence 34445666 54443334477999999974
No 337
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.65 E-value=19 Score=17.30 Aligned_cols=15 Identities=7% Similarity=-0.017 Sum_probs=11.3
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2eon_A 10 EKPYKCQVCGKAFRV 24 (46)
T ss_dssp CCSCBCSSSCCBCSS
T ss_pred CcccCCCCCCcccCc
Confidence 345999999988653
No 338
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=26.63 E-value=35 Score=18.85 Aligned_cols=25 Identities=24% Similarity=0.519 Sum_probs=17.9
Q ss_pred EEcCcCCcceecCCCCCeecCCCCC
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
-.|.-|+.......+..+.|..|..
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd~C~~ 31 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICDKCGQ 31 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECSSSCC
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCh
Confidence 4577887765556677788888864
No 339
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.52 E-value=17 Score=17.39 Aligned_cols=13 Identities=15% Similarity=-0.153 Sum_probs=9.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2emz_A 11 RPFKCNECGKGFG 23 (46)
T ss_dssp CSCCCSSSCCCCS
T ss_pred CCeECCCCCcccC
Confidence 4588888877654
No 340
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.47 E-value=50 Score=15.54 Aligned_cols=14 Identities=7% Similarity=0.078 Sum_probs=10.2
Q ss_pred ceEEEcC--cCCccee
Q psy2244 15 DIEKYYL--ECHFENE 28 (73)
Q Consensus 15 ~v~YiC~--~Cg~e~~ 28 (73)
...|.|. .|++.+.
T Consensus 10 ~k~~~C~~~~C~k~f~ 25 (48)
T 2ent_A 10 EKPFACTWPGCGWRFS 25 (48)
T ss_dssp CCCEECCSSSCCCEES
T ss_pred CCCeECCCCCCCCccC
Confidence 4558887 8888765
No 341
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.32 E-value=18 Score=17.15 Aligned_cols=13 Identities=15% Similarity=-0.008 Sum_probs=9.1
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 ~~~~C~~C~k~f~ 23 (44)
T 2eou_A 11 TTSECQECGKIFR 23 (44)
T ss_dssp CCCCCTTTCCCCS
T ss_pred cCeECCCCCcccC
Confidence 4578888877654
No 342
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.15 E-value=18 Score=17.24 Aligned_cols=14 Identities=14% Similarity=0.005 Sum_probs=9.7
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~f~ 23 (46)
T 2eq1_A 10 EKPYKCNECGKAFR 23 (46)
T ss_dssp SCCCCCTTTTCCCS
T ss_pred CCCeECCcCChhhC
Confidence 34588888887754
No 343
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=26.13 E-value=35 Score=19.58 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=18.6
Q ss_pred CcceEEEcCcCCcceecCCCCCeecC-CCCC
Q psy2244 13 PGDIEKYYLECHFENEIRPRDPIRCR-ECGY 42 (73)
Q Consensus 13 ~~~v~YiC~~Cg~e~~ik~~d~IRC~-~CG~ 42 (73)
.++..+.|+.|+...+.. ...|.|- .|..
T Consensus 4 ~~~~~~~C~~C~~p~~~~-~~mI~CD~~C~~ 33 (65)
T 2vpb_A 4 SSDPVYPCGICTNEVNDD-QDAILCEASCQK 33 (65)
T ss_dssp -----CBCTTTCSBCCTT-SCEEEBTTTTCC
T ss_pred CCCCcCcCccCCCccCCC-CCeEecccCccc
Confidence 356779999999986533 4669998 8864
No 344
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.09 E-value=20 Score=17.19 Aligned_cols=15 Identities=13% Similarity=-0.053 Sum_probs=11.1
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~f~~ 24 (46)
T 2yth_A 10 EKPFQCEECGKRFTQ 24 (46)
T ss_dssp SSSBCCSSSCCCBSS
T ss_pred CcCCCCCCCCcccCC
Confidence 345999999987653
No 345
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.89 E-value=22 Score=16.89 Aligned_cols=13 Identities=15% Similarity=0.156 Sum_probs=9.3
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 9 k~~~C~~C~k~f~ 21 (43)
T 2yrm_A 9 GAFFCNECDCRFS 21 (43)
T ss_dssp CCBCCSSSCCCBS
T ss_pred CCEECCCCCCeeC
Confidence 4588888887754
No 346
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.78 E-value=17 Score=17.49 Aligned_cols=14 Identities=7% Similarity=-0.107 Sum_probs=9.9
Q ss_pred ceEEEcCcCCccee
Q psy2244 15 DIEKYYLECHFENE 28 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ 28 (73)
...|.|..|++.+.
T Consensus 10 ~k~~~C~~C~k~F~ 23 (46)
T 2eom_A 10 ERGHRCSDCGKFFL 23 (46)
T ss_dssp CSSCCCSSSCCCCS
T ss_pred CCCcCCCCCCCeeC
Confidence 34588888887754
No 347
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.78 E-value=15 Score=17.21 Aligned_cols=13 Identities=15% Similarity=-0.038 Sum_probs=9.0
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..||+.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (44)
T 2en7_A 11 KPYVCNECGKAFR 23 (44)
T ss_dssp SSSCCTTTCCCCS
T ss_pred cCeECCCCCCccC
Confidence 3478888877654
No 348
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=25.73 E-value=18 Score=21.12 Aligned_cols=12 Identities=42% Similarity=1.090 Sum_probs=9.4
Q ss_pred CCeecCCCCCeE
Q psy2244 33 DPIRCRECGYRI 44 (73)
Q Consensus 33 d~IRC~~CG~RI 44 (73)
-||||--||.=|
T Consensus 2 iPVRCFTCGkvi 13 (55)
T 1ef4_A 2 IPVRCLSCGKPV 13 (55)
T ss_dssp CSSSCSCTTSCC
T ss_pred CCeecCCCCCCh
Confidence 378999999754
No 349
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=25.64 E-value=34 Score=20.99 Aligned_cols=13 Identities=23% Similarity=0.636 Sum_probs=11.0
Q ss_pred CCCeecCCCCCeE
Q psy2244 32 RDPIRCRECGYRI 44 (73)
Q Consensus 32 ~d~IRC~~CG~RI 44 (73)
.|.|+|-.||..+
T Consensus 46 ~D~v~Cf~C~~~l 58 (97)
T 3d9t_A 46 NDDVKCFCCDGGL 58 (97)
T ss_dssp TTCEEETTTCCEE
T ss_pred CCEEEecCcCCEe
Confidence 5789999999865
No 350
>3r8s_0 50S ribosomal protein L32; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_Z 1p86_Z 2awb_0 2aw4_0 2i2v_0 2j28_0 2i2t_0* 2qao_0* 2qba_0* 2qbc_0* 2qbe_0 2qbg_0 2qbi_0* 2qbk_0* 2qov_0 2qox_0 2qoz_0* 2qp1_0* 2rdo_0 2vhm_0 ...
Probab=25.40 E-value=46 Score=18.89 Aligned_cols=10 Identities=10% Similarity=-0.071 Sum_probs=6.6
Q ss_pred CCeecCCCCC
Q psy2244 33 DPIRCRECGY 42 (73)
Q Consensus 33 d~IRC~~CG~ 42 (73)
..+.|++||.
T Consensus 26 ~l~~c~~cGe 35 (56)
T 3r8s_0 26 SLSVDKTSGE 35 (56)
T ss_dssp CEEECTTTCC
T ss_pred ceeECCCCCC
Confidence 4567777776
No 351
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=25.32 E-value=13 Score=30.63 Aligned_cols=30 Identities=23% Similarity=0.315 Sum_probs=21.4
Q ss_pred EcCcCCccee-cC----CCCCeecCCCCCeEEEee
Q psy2244 19 YYLECHFENE-IR----PRDPIRCRECGYRIMYKK 48 (73)
Q Consensus 19 iC~~Cg~e~~-ik----~~d~IRC~~CG~RILyKk 48 (73)
+|.+|.+|-+ .. --.+|-||.||-++-+.-
T Consensus 158 mC~~C~~EY~dp~dRRfhAqp~aC~~CGP~l~l~~ 192 (772)
T 4g9i_A 158 MCDFCRSEYEDPLNRRYHAEPTACPVCGPSYRLYT 192 (772)
T ss_dssp CCHHHHHHHHCSSSTTTTCTTCCCTTTSCCEEEES
T ss_pred CChhHHHHhCCCCCCCCcCCCCCCccCCceEEEEc
Confidence 5888877733 22 238899999999986643
No 352
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=25.23 E-value=12 Score=30.44 Aligned_cols=26 Identities=27% Similarity=0.554 Sum_probs=19.3
Q ss_pred EcCcCCcceecC-----CCCCeecCCCCCeE
Q psy2244 19 YYLECHFENEIR-----PRDPIRCRECGYRI 44 (73)
Q Consensus 19 iC~~Cg~e~~ik-----~~d~IRC~~CG~RI 44 (73)
+|.+|.+|-+-. --.+|-||.||-++
T Consensus 69 mC~~C~~EY~dp~dRRfHAqp~aCp~CGP~l 99 (657)
T 3ttc_A 69 LCPACDKEYRDPLDRRFHAQPVACPECGPYL 99 (657)
T ss_dssp CCHHHHHHHHCTTSTTTTCTTCCCTTTSCCE
T ss_pred CChHHHHHhCCCCCCcCcCCCCcCcccCccc
Confidence 588887773322 22889999999998
No 353
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=24.53 E-value=36 Score=21.83 Aligned_cols=13 Identities=31% Similarity=0.782 Sum_probs=11.4
Q ss_pred CCCeecCCCCCeE
Q psy2244 32 RDPIRCRECGYRI 44 (73)
Q Consensus 32 ~d~IRC~~CG~RI 44 (73)
.|.|+|-.||..|
T Consensus 70 ~D~V~Cf~C~~~L 82 (111)
T 2qra_D 70 GDTVRCFSCHAAV 82 (111)
T ss_dssp TTCEEETTTCCEE
T ss_pred CCEEEcccCCCEe
Confidence 5889999999876
No 354
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.51 E-value=18 Score=17.16 Aligned_cols=13 Identities=8% Similarity=-0.153 Sum_probs=9.2
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2ep1_A 11 KPYECSDCGKSFI 23 (46)
T ss_dssp CSSCCSSSCCCCS
T ss_pred CCcCCCCCCchhC
Confidence 4488888887754
No 355
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=24.22 E-value=45 Score=20.06 Aligned_cols=24 Identities=17% Similarity=0.480 Sum_probs=14.9
Q ss_pred EEcCcCCcceecCCCCCeecCCCCC
Q psy2244 18 KYYLECHFENEIRPRDPIRCRECGY 42 (73)
Q Consensus 18 YiC~~Cg~e~~ik~~d~IRC~~CG~ 42 (73)
-.|..|+..+.+-. ..-.|+.||.
T Consensus 10 ~~C~~C~~~F~~~~-RrHHCR~CG~ 33 (88)
T 1wfk_A 10 SRCYGCAVKFTLFK-KEYGCKNCGR 33 (88)
T ss_dssp SBCTTTCCBCCSSS-CEEECSSSCC
T ss_pred CCCcCcCCcccCcc-ccccCCCCCC
Confidence 36888988887653 2244555553
No 356
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.15 E-value=20 Score=17.14 Aligned_cols=13 Identities=15% Similarity=-0.087 Sum_probs=9.3
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2eoh_A 11 KPYECKECRKTFI 23 (46)
T ss_dssp CSCCCSSSCCCCS
T ss_pred CCcCCCCcCchhC
Confidence 3488888887754
No 357
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=24.04 E-value=32 Score=19.90 Aligned_cols=12 Identities=8% Similarity=-0.172 Sum_probs=5.7
Q ss_pred eEEEcCcCCcce
Q psy2244 16 IEKYYLECHFEN 27 (73)
Q Consensus 16 v~YiC~~Cg~e~ 27 (73)
..|.|.+|+..+
T Consensus 29 ~~y~C~~C~~~F 40 (59)
T 1z60_A 29 HVYVCAVCQNVF 40 (59)
T ss_dssp EEECCTTTTCCB
T ss_pred ccEECCccCcCc
Confidence 335555554443
No 358
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.79 E-value=17 Score=17.32 Aligned_cols=15 Identities=13% Similarity=-0.091 Sum_probs=11.1
Q ss_pred ceEEEcCcCCcceec
Q psy2244 15 DIEKYYLECHFENEI 29 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~i 29 (73)
...|.|..|++.+.-
T Consensus 10 ~k~~~C~~C~k~F~~ 24 (46)
T 2yti_A 10 EKPYKCNECGKVFTQ 24 (46)
T ss_dssp CCTTCCSSSCCCCSS
T ss_pred CcCeECCCCCcccCC
Confidence 345899999987653
No 359
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.55 E-value=18 Score=17.26 Aligned_cols=13 Identities=15% Similarity=-0.059 Sum_probs=9.3
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2eq2_A 11 KPYQCNECGKAFS 23 (46)
T ss_dssp CSSSCCSSCCCCS
T ss_pred CCeECCCCCcccC
Confidence 4588888887754
No 360
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=23.23 E-value=24 Score=21.44 Aligned_cols=12 Identities=42% Similarity=1.057 Sum_probs=9.5
Q ss_pred CCeecCCCCCeE
Q psy2244 33 DPIRCRECGYRI 44 (73)
Q Consensus 33 d~IRC~~CG~RI 44 (73)
-||||--||.=|
T Consensus 3 iPVRCFTCGkvi 14 (70)
T 1twf_J 3 VPVRCFSCGKVV 14 (70)
T ss_dssp CCSBCTTTCCBC
T ss_pred CCeecCCCCCCh
Confidence 479999999754
No 361
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.92 E-value=24 Score=20.03 Aligned_cols=18 Identities=11% Similarity=-0.370 Sum_probs=13.3
Q ss_pred CCcceEEEcCcCCcceec
Q psy2244 12 LPGDIEKYYLECHFENEI 29 (73)
Q Consensus 12 ~~~~v~YiC~~Cg~e~~i 29 (73)
..+...|.|..|++.+.-
T Consensus 8 ~~~ekpy~C~~CgK~F~~ 25 (66)
T 2epp_A 8 LREAGILPCGLCGKVFTD 25 (66)
T ss_dssp CCCCCCCCCTTTCCCCSC
T ss_pred CCCccCcCCCCCCCccCC
Confidence 445567999999888653
No 362
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.84 E-value=20 Score=17.04 Aligned_cols=13 Identities=8% Similarity=-0.133 Sum_probs=8.9
Q ss_pred eEEEcCcCCccee
Q psy2244 16 IEKYYLECHFENE 28 (73)
Q Consensus 16 v~YiC~~Cg~e~~ 28 (73)
..|.|..|++.+.
T Consensus 11 k~~~C~~C~k~f~ 23 (46)
T 2eq3_A 11 KPYECNQCGKAFS 23 (46)
T ss_dssp CSSEETTTTEECS
T ss_pred CCeECCCCChhhC
Confidence 4577888877654
No 363
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.83 E-value=45 Score=18.20 Aligned_cols=27 Identities=11% Similarity=0.137 Sum_probs=16.3
Q ss_pred EEcCcCCcceecCC-----C------CCeecCCCCCeE
Q psy2244 18 KYYLECHFENEIRP-----R------DPIRCRECGYRI 44 (73)
Q Consensus 18 YiC~~Cg~e~~ik~-----~------d~IRC~~CG~RI 44 (73)
-+|..|+..+.... . +=-+|..|+..+
T Consensus 12 ~~C~~C~~~I~~~~~~~~a~~~~~H~~CF~C~~C~~~L 49 (77)
T 1g47_A 12 ATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQF 49 (77)
T ss_dssp CBCSSSCCBCCSTTTCEEETTEEECTTTCCCTTTCCCC
T ss_pred CCchhcCCccCCCceEEEeCccEeccccCeECCCCCCC
Confidence 46888888775221 1 225677787654
No 364
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=22.57 E-value=43 Score=20.14 Aligned_cols=13 Identities=31% Similarity=0.889 Sum_probs=11.3
Q ss_pred CCCeecCCCCCeE
Q psy2244 32 RDPIRCRECGYRI 44 (73)
Q Consensus 32 ~d~IRC~~CG~RI 44 (73)
.|.++|-.||..+
T Consensus 44 ~D~v~Cf~C~~~l 56 (85)
T 3m1d_A 44 NDKVKCFCCGLML 56 (85)
T ss_dssp TTCEEETTTCCEE
T ss_pred CCEEEeCCcCCEe
Confidence 6889999999875
No 365
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=22.54 E-value=37 Score=24.08 Aligned_cols=12 Identities=17% Similarity=0.266 Sum_probs=8.9
Q ss_pred EEEcCcCCccee
Q psy2244 17 EKYYLECHFENE 28 (73)
Q Consensus 17 ~YiC~~Cg~e~~ 28 (73)
...|.+|+....
T Consensus 134 ~~~C~~C~~~~~ 145 (273)
T 3riy_A 134 KTRCTSCGVVAE 145 (273)
T ss_dssp EEEETTTCCEEE
T ss_pred eeEcCCCCCccc
Confidence 458999998753
No 366
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.51 E-value=27 Score=19.02 Aligned_cols=10 Identities=10% Similarity=-0.047 Sum_probs=5.6
Q ss_pred EcCcCCccee
Q psy2244 19 YYLECHFENE 28 (73)
Q Consensus 19 iC~~Cg~e~~ 28 (73)
+|..|+..+.
T Consensus 7 ~C~~C~~~I~ 16 (72)
T 1x4l_A 7 GCAGCTNPIS 16 (72)
T ss_dssp SBTTTTBCCC
T ss_pred CCcCCCcccc
Confidence 4566665554
No 367
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=21.99 E-value=26 Score=21.88 Aligned_cols=10 Identities=30% Similarity=0.677 Sum_probs=8.4
Q ss_pred eecCCCCCeE
Q psy2244 35 IRCRECGYRI 44 (73)
Q Consensus 35 IRC~~CG~RI 44 (73)
.-||+|+.|.
T Consensus 31 NiCPYC~nRl 40 (77)
T 2l7x_A 31 NICPYCASRL 40 (77)
T ss_dssp TCCTTTCCCC
T ss_pred ccChhhhccC
Confidence 5699999985
No 368
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=21.94 E-value=44 Score=18.68 Aligned_cols=11 Identities=27% Similarity=0.627 Sum_probs=6.9
Q ss_pred ecCCCCCeEEE
Q psy2244 36 RCRECGYRIMY 46 (73)
Q Consensus 36 RC~~CG~RILy 46 (73)
.|.+||..|.-
T Consensus 20 ~C~~CG~~i~~ 30 (49)
T 2l8e_A 20 KCEYCGKYAPA 30 (49)
T ss_dssp ECTTTCCEEEG
T ss_pred cChhccCcccc
Confidence 47777766653
No 369
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=21.90 E-value=62 Score=19.89 Aligned_cols=29 Identities=21% Similarity=0.471 Sum_probs=22.3
Q ss_pred eEEEcCcCCcceecCC---CCCeecCCCCCeE
Q psy2244 16 IEKYYLECHFENEIRP---RDPIRCRECGYRI 44 (73)
Q Consensus 16 v~YiC~~Cg~e~~ik~---~d~IRC~~CG~RI 44 (73)
+.-.|..|++.+.+.. ...-+|..|+...
T Consensus 13 ~~~~c~~c~~~~~~~~~r~~~~~~~~~~~~~~ 44 (155)
T 2ppt_A 13 LRLTCLACGQANKVPSDRLAAGPKCGICGAGL 44 (155)
T ss_dssp EEEECTTTCCEEEEEGGGTTSCCBCTTTCCBS
T ss_pred ceEECccccccccCCcccccCCCCCCcCCccc
Confidence 3588999999988763 4567898888754
No 370
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=21.88 E-value=47 Score=20.31 Aligned_cols=15 Identities=27% Similarity=0.720 Sum_probs=12.2
Q ss_pred CCCCeecCCCCCeEE
Q psy2244 31 PRDPIRCRECGYRIM 45 (73)
Q Consensus 31 ~~d~IRC~~CG~RIL 45 (73)
..|.|+|-.|+..|-
T Consensus 43 ~~D~v~Cf~C~~~l~ 57 (95)
T 3hl5_A 43 EGDKVKCFHCGGGLT 57 (95)
T ss_dssp STTCEEETTTCCEEC
T ss_pred CCCeEEecCCCCCcc
Confidence 468899999998763
No 371
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=21.86 E-value=54 Score=18.91 Aligned_cols=28 Identities=29% Similarity=0.459 Sum_probs=17.0
Q ss_pred ceEEEcCcCCcceecCCCCCeecCCCCCeEEEeee
Q psy2244 15 DIEKYYLECHFENEIRPRDPIRCRECGYRIMYKKR 49 (73)
Q Consensus 15 ~v~YiC~~Cg~e~~ik~~d~IRC~~CG~RILyKkR 49 (73)
+..=.|.+||.....- --|++|| .||-|
T Consensus 28 p~l~~c~~cGe~~~~H----~vc~~CG---~Y~gr 55 (60)
T 3v2d_5 28 PTLVPCPECKAMKPPH----TVCPECG---YYAGR 55 (60)
T ss_dssp CCCEECTTTCCEECTT----SCCTTTC---EETTE
T ss_pred CceeECCCCCCeecce----EEcCCCC---cCCCE
Confidence 4456788888744222 4488888 45543
No 372
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=21.78 E-value=53 Score=21.51 Aligned_cols=18 Identities=22% Similarity=0.194 Sum_probs=15.4
Q ss_pred CeEEEeeeCCeeEEEeec
Q psy2244 42 YRIMYKKRTKRCILYFKP 59 (73)
Q Consensus 42 ~RILyKkRt~r~vqf~~~ 59 (73)
+-|+++||++..-||+=-
T Consensus 35 ~~i~f~KRt~GiRqfEi~ 52 (108)
T 1kaf_A 35 YLAILEKRTNGIRNFEIN 52 (108)
T ss_dssp EEEEEEEEETTEEEEEEC
T ss_pred eEEeeecccCceeEEEEe
Confidence 578999999999999753
No 373
>3u5c_a 40S ribosomal protein S26-A, 40S ribosomal protein S25-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3u5g_a
Probab=21.71 E-value=37 Score=22.56 Aligned_cols=13 Identities=38% Similarity=0.971 Sum_probs=10.4
Q ss_pred CCCeecCCCCCeE
Q psy2244 32 RDPIRCRECGYRI 44 (73)
Q Consensus 32 ~d~IRC~~CG~RI 44 (73)
..+|+|.+||..+
T Consensus 18 v~~V~C~nCgr~v 30 (119)
T 3u5c_a 18 VKPVRCVNCSKSI 30 (119)
T ss_dssp CCEEECTTTCCEE
T ss_pred CccEeeccccccc
Confidence 3679999999744
No 374
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=21.70 E-value=44 Score=20.13 Aligned_cols=24 Identities=21% Similarity=0.374 Sum_probs=15.6
Q ss_pred EEEcCcCCcceecCCCCCeecCCCCCe
Q psy2244 17 EKYYLECHFENEIRPRDPIRCRECGYR 43 (73)
Q Consensus 17 ~YiC~~Cg~e~~ik~~d~IRC~~CG~R 43 (73)
.|.|.-|+... .+-.-+|..|++.
T Consensus 47 ~~~C~~C~~~~---~~~~Y~C~~C~f~ 70 (89)
T 1v5n_A 47 VYTCDKCEEEG---TIWSYHCDECDFD 70 (89)
T ss_dssp SCCCTTTSCCC---CSCEEECTTTCCC
T ss_pred CeEeCCCCCcC---CCcEEEcCCCCCe
Confidence 36788887663 2445778777764
No 375
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=21.49 E-value=17 Score=30.00 Aligned_cols=29 Identities=21% Similarity=0.502 Sum_probs=19.9
Q ss_pred EcCcCCcceecC-----CCCCeecCCCCCeEEEe
Q psy2244 19 YYLECHFENEIR-----PRDPIRCRECGYRIMYK 47 (73)
Q Consensus 19 iC~~Cg~e~~ik-----~~d~IRC~~CG~RILyK 47 (73)
+|.+|.+|-+-. --.++-||.||-++-+.
T Consensus 163 mC~~C~~EY~dp~~RRfhAqp~aC~~CGP~l~l~ 196 (761)
T 3vth_A 163 MCEKCSREYHDPHDRRFHAQPVACFDCGPSLSFV 196 (761)
T ss_dssp CCHHHHHHHTCTTSTTTTCTTCCCTTTSCCEEEE
T ss_pred CCHHHHHHhcCcccccccCCCCcCCccCCeeEEe
Confidence 577776663221 12889999999998654
No 376
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=21.43 E-value=47 Score=21.40 Aligned_cols=14 Identities=29% Similarity=0.785 Sum_probs=11.6
Q ss_pred CCCCeecCCCCCeE
Q psy2244 31 PRDPIRCRECGYRI 44 (73)
Q Consensus 31 ~~d~IRC~~CG~RI 44 (73)
..|.|+|-.||..|
T Consensus 57 ~~D~V~Cf~C~~~L 70 (121)
T 1g73_C 57 EGDKVKCFHCGGGL 70 (121)
T ss_dssp STTCEEETTTCCEE
T ss_pred CCCEEEcCcCCCCc
Confidence 46789999999766
No 377
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=21.39 E-value=46 Score=20.90 Aligned_cols=14 Identities=29% Similarity=0.729 Sum_probs=11.5
Q ss_pred CCCeecCCCCCeEE
Q psy2244 32 RDPIRCRECGYRIM 45 (73)
Q Consensus 32 ~d~IRC~~CG~RIL 45 (73)
.|.|+|-.||..|-
T Consensus 54 ~D~V~Cf~C~~~L~ 67 (106)
T 2vm5_A 54 QDTVQCFSCGGCLG 67 (106)
T ss_dssp TTCEEETTTCCEEE
T ss_pred CCEEEccccCCEec
Confidence 68899999997653
No 378
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=21.03 E-value=73 Score=19.37 Aligned_cols=24 Identities=17% Similarity=0.311 Sum_probs=11.3
Q ss_pred cCcCCcceecCCCC--CeecCCCCCe
Q psy2244 20 YLECHFENEIRPRD--PIRCRECGYR 43 (73)
Q Consensus 20 C~~Cg~e~~ik~~d--~IRC~~CG~R 43 (73)
|..|+..+---... +..|..|+..
T Consensus 38 Cd~C~~~lWGl~kqp~G~~C~~C~~~ 63 (84)
T 2row_A 38 CEACMKPLWHMFKPPPALECRRCHIK 63 (84)
T ss_dssp CSSSSSEECCSSSCCCEEEESSSCCE
T ss_pred hhhcCHhhhccccCCCCCEecCCCCc
Confidence 55555543322222 5566666543
No 379
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=20.94 E-value=47 Score=21.65 Aligned_cols=14 Identities=43% Similarity=0.935 Sum_probs=11.8
Q ss_pred CCCeecCCCCCeEE
Q psy2244 32 RDPIRCRECGYRIM 45 (73)
Q Consensus 32 ~d~IRC~~CG~RIL 45 (73)
.|.|+|-.||..|-
T Consensus 58 ~D~V~Cf~C~~~L~ 71 (124)
T 1jd5_A 58 GDRVRCFSCGGGLM 71 (124)
T ss_dssp TTCEEETTTCCEEE
T ss_pred CCEEEecCCCCEec
Confidence 58899999998763
No 380
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=20.93 E-value=34 Score=23.64 Aligned_cols=33 Identities=27% Similarity=0.562 Sum_probs=20.9
Q ss_pred EcCcCCcc-eecC-----CCCCeecCCCCCeEEEeeeCC
Q psy2244 19 YYLECHFE-NEIR-----PRDPIRCRECGYRIMYKKRTK 51 (73)
Q Consensus 19 iC~~Cg~e-~~ik-----~~d~IRC~~CG~RILyKkRt~ 51 (73)
+|..|+.. .++. ..-.++|..||++=-...|.+
T Consensus 98 lC~~C~sPdT~L~k~~~~r~~~l~C~ACGa~~~V~~~~k 136 (170)
T 2g2k_A 98 LCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHK 136 (170)
T ss_dssp SCTTTSSSCEEEEEETTTTEEEEEETTTCCCCCSCSSSS
T ss_pred ECCCCCCCccEEEEecCCCEEEEEccccCCccccccccc
Confidence 58899776 2222 224589999999755555433
No 381
>3u6p_A Formamidopyrimidine-DNA glycosylase; DNA glycosylase, DNA repair, sequence context; HET: DNA 08Q; 1.60A {Geobacillus stearothermophilus} PDB: 3u6d_A* 3u6c_A* 3u6l_A* 3u6m_A* 3u6o_A* 3u6e_A* 3u6q_A* 3u6s_A* 3gp1_A* 3sbj_A* 2f5q_A* 2f5s_A* 3gq4_A* 3gpy_A* 2f5n_A 2f5o_A 2f5p_A 3sau_A* 3sar_A* 3sav_A* ...
Probab=20.40 E-value=76 Score=22.58 Aligned_cols=18 Identities=28% Similarity=0.495 Sum_probs=10.2
Q ss_pred eecCCCCCeEEEeeeCCe
Q psy2244 35 IRCRECGYRIMYKKRTKR 52 (73)
Q Consensus 35 IRC~~CG~RILyKkRt~r 52 (73)
--|+.||..|.-.+-..|
T Consensus 246 ~pC~~CG~~I~~~~~~gR 263 (273)
T 3u6p_A 246 NPCKRCGTPIEKTVVAGR 263 (273)
T ss_dssp SBCTTTCCBCEEEEETTE
T ss_pred CCCCCCCCeEEEEEECCC
Confidence 457777776654443333
No 382
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.39 E-value=55 Score=18.16 Aligned_cols=10 Identities=20% Similarity=0.126 Sum_probs=7.2
Q ss_pred EcCcCCccee
Q psy2244 19 YYLECHFENE 28 (73)
Q Consensus 19 iC~~Cg~e~~ 28 (73)
+|+.|+..+.
T Consensus 17 ~C~~C~~~I~ 26 (82)
T 2ehe_A 17 TCAECQQLIG 26 (82)
T ss_dssp BCTTTCCBCC
T ss_pred cCccCCCccc
Confidence 6777777665
No 383
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=20.28 E-value=52 Score=21.06 Aligned_cols=15 Identities=33% Similarity=0.700 Sum_probs=12.4
Q ss_pred CCCCeecCCCCCeEE
Q psy2244 31 PRDPIRCRECGYRIM 45 (73)
Q Consensus 31 ~~d~IRC~~CG~RIL 45 (73)
..|.|+|-.||..+-
T Consensus 45 ~~D~V~Cf~C~~~L~ 59 (116)
T 1se0_A 45 AGDKVKCFFCGVEIG 59 (116)
T ss_dssp STTCEEETTTCCEEE
T ss_pred CCCEEEecCcCCEec
Confidence 368899999998764
No 384
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=20.26 E-value=30 Score=14.83 Aligned_cols=11 Identities=9% Similarity=-0.118 Sum_probs=7.5
Q ss_pred EEcC--cCCccee
Q psy2244 18 KYYL--ECHFENE 28 (73)
Q Consensus 18 YiC~--~Cg~e~~ 28 (73)
|.|. .||+.+.
T Consensus 3 ~~C~~~~C~k~f~ 15 (31)
T 1sp2_A 3 FMCTWSYCGKRFT 15 (31)
T ss_dssp CBCCSTTCCCBCS
T ss_pred cCCcCCCCCcccC
Confidence 6776 7877654
No 385
>1igl_A Insulin-like growth factor II; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 2l29_B 2v5p_C* 3e4z_C 3kr3_D
Probab=20.01 E-value=9.3 Score=22.69 Aligned_cols=21 Identities=19% Similarity=0.105 Sum_probs=18.4
Q ss_pred CccceeccccCCcceEEEcCc
Q psy2244 2 GYSQVLVGKCLPGDIEKYYLE 22 (73)
Q Consensus 2 ~~~~~l~~~~~~~~v~YiC~~ 22 (73)
.+++.|||.+|.+....+|++
T Consensus 3 ~~~~~lCG~~L~daL~~vC~~ 23 (67)
T 1igl_A 3 RPSETLCGGELVDTLQFVCGD 23 (67)
T ss_dssp CSSCCCCTTTTHHHHHHHTCT
T ss_pred ccccchhHHHHHHHHHHHHcc
Confidence 357899999999999999986
Done!