Query psy2245
Match_columns 88
No_of_seqs 27 out of 29
Neff 2.2
Searched_HMMs 13730
Date Fri Aug 16 19:51:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2245.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2245hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uptb_ a.193.1.1 (B:) Golgi a 98.0 5.3E-06 3.8E-10 51.3 5.3 48 36-84 4-54 (58)
2 d2croa_ a.35.1.2 (A:) cro 434 76.0 2 0.00014 23.2 3.9 56 17-72 4-61 (65)
3 d1r69a_ a.35.1.2 (A:) 434 C1 r 76.0 2.1 0.00015 22.8 3.9 55 18-72 3-59 (63)
4 d2zjr41 g.42.1.1 (4:1-37) Ribo 74.4 0.39 2.9E-05 26.6 0.5 9 5-13 25-33 (37)
5 d1y7ya1 a.35.1.3 (A:5-73) Rest 72.3 2.5 0.00018 23.0 3.7 59 13-71 6-67 (69)
6 d1x2na1 a.4.1.1 (A:6-67) Homeo 53.5 15 0.0011 20.2 5.0 46 28-74 6-51 (62)
7 d2b5aa1 a.35.1.3 (A:1-77) Regu 50.8 15 0.0011 19.8 4.4 56 17-72 11-69 (77)
8 d2jdid1 a.69.1.1 (D:358-475) F 50.5 5.8 0.00042 25.8 2.9 25 56-80 25-52 (118)
9 d1skye1 a.69.1.1 (E:357-470) F 48.8 6.3 0.00046 25.6 2.9 26 55-80 21-49 (114)
10 d1ddga2 c.25.1.4 (A:447-599) S 45.0 18 0.0013 20.8 4.4 39 5-43 104-142 (153)
11 d1b0na2 a.35.1.3 (A:1-68) SinR 42.2 20 0.0015 18.9 4.0 54 19-72 4-61 (68)
12 d2qy9a1 a.24.13.1 (A:201-284) 41.5 22 0.0016 20.0 4.3 32 19-50 50-81 (84)
13 d1rfya_ a.2.13.1 (A:) Transcri 40.9 5 0.00036 25.4 1.3 52 13-69 26-88 (89)
14 d1fx0b1 a.69.1.1 (B:378-485) F 40.9 6.3 0.00046 25.2 1.8 26 55-80 21-49 (108)
15 d1k61a_ a.4.1.1 (A:) mat alpha 40.4 25 0.0018 19.0 5.7 45 31-75 4-48 (60)
16 d1u7ka_ a.73.1.1 (A:) AKV caps 39.8 21 0.0015 23.0 4.4 46 30-80 31-76 (131)
17 d1qgia_ d.2.1.7 (A:) Endochito 38.8 17 0.0012 26.0 4.2 27 54-80 8-34 (259)
18 d1pufb_ a.4.1.1 (B:) pbx1 {Hum 36.8 31 0.0023 19.1 5.3 47 32-78 8-54 (73)
19 d2onsa1 c.94.1.1 (A:32-342) Mo 36.0 15 0.0011 20.9 2.8 32 28-69 260-291 (311)
20 d1mgsa_ d.9.1.1 (A:) Melanoma 36.0 15 0.0011 20.7 2.9 14 5-18 49-62 (73)
21 d2qam41 g.42.1.1 (4:1-38) Ribo 34.6 5.1 0.00037 21.8 0.5 9 5-13 25-34 (38)
22 d1uqta_ c.87.1.6 (A:) Trehalos 34.5 14 0.0011 26.1 3.1 29 48-76 399-427 (456)
23 d1y9qa1 a.35.1.8 (A:4-82) Prob 34.0 20 0.0014 19.3 3.1 55 17-71 9-66 (79)
24 d2bl8a1 a.29.8.2 (A:4-103) Ent 33.4 11 0.00078 24.1 2.0 29 59-87 58-90 (100)
25 d2r1jl1 a.35.1.2 (L:3-68) P22 33.0 23 0.0017 18.5 3.2 53 19-71 6-61 (66)
26 d2ffia1 c.1.9.15 (A:10-280) Pu 32.7 21 0.0016 20.4 3.2 25 56-81 241-265 (271)
27 d1bo0a_ d.9.1.1 (A:) Monocyte 32.4 13 0.00097 21.0 2.2 21 5-25 50-70 (76)
28 d1zcba2 c.37.1.8 (A:47-75,A:20 31.9 8.2 0.00059 22.7 1.2 36 29-64 143-193 (200)
29 d1eiga_ d.9.1.1 (A:) Eotaxin-2 31.5 21 0.0015 20.0 3.0 24 5-28 46-69 (73)
30 d1go3f_ a.60.8.2 (F:) RNA poly 30.9 26 0.0019 21.3 3.6 43 30-76 31-73 (107)
31 d1zboa1 b.122.1.10 (A:2-198) H 30.9 24 0.0018 20.7 3.3 22 57-78 161-182 (197)
32 d1l0oc_ a.4.13.2 (C:) SigmaF { 30.3 14 0.001 19.9 2.0 32 48-79 24-55 (57)
33 d1ha6a_ d.9.1.1 (A:) Macrophag 29.4 21 0.0016 20.0 2.7 23 5-27 46-68 (70)
34 d1oqya2 a.5.2.1 (A:317-360) DN 27.0 7.6 0.00055 21.7 0.4 14 68-81 1-14 (44)
35 d2pqrb1 a.118.8.1 (B:5-128) Mi 26.6 51 0.0037 20.5 4.5 57 4-64 44-102 (124)
36 d1xj3a1 d.110.3.2 (A:154-259) 26.5 20 0.0014 18.2 2.1 13 59-71 17-29 (106)
37 d1whza_ d.50.3.2 (A:) Hypothet 26.2 25 0.0018 19.7 2.6 22 52-73 47-68 (70)
38 d1cyja_ a.3.1.1 (A:) Cytochrom 25.6 19 0.0014 19.4 2.0 19 67-85 67-90 (90)
39 d1t3wa_ a.236.1.1 (A:) DNA pri 25.6 9 0.00066 22.9 0.6 41 38-78 87-128 (134)
40 d2eota_ d.9.1.1 (A:) Eotaxin { 25.6 30 0.0022 19.3 2.9 23 5-27 48-70 (74)
41 d2ptaa_ g.3.7.2 (A:) Pandinus 24.8 6 0.00044 21.3 -0.3 9 5-13 2-10 (35)
42 d1ja1a3 c.25.1.4 (A:519-678) N 24.7 30 0.0022 21.2 3.1 39 5-43 110-148 (160)
43 d1miwa1 a.173.1.1 (A:140-404) 24.7 61 0.0044 19.6 4.5 33 10-42 223-256 (265)
44 d1lmb3_ a.35.1.2 (3:) lambda C 24.4 31 0.0022 19.4 2.8 57 16-72 12-71 (87)
45 d1icwa_ d.9.1.1 (A:) Interleuk 24.4 31 0.0022 19.1 2.8 14 5-18 45-58 (69)
46 d1j8ia_ d.9.1.1 (A:) Lymphotac 23.7 34 0.0025 20.3 3.1 22 5-26 46-67 (93)
47 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 23.7 56 0.0041 17.8 3.9 42 13-55 19-62 (77)
48 d1qo7a_ c.69.1.11 (A:) Bacteri 23.5 17 0.0012 24.0 1.7 51 10-60 22-81 (394)
49 d2hyja2 a.121.1.1 (A:83-200) P 23.4 60 0.0043 18.0 6.2 50 17-66 58-116 (118)
50 d1d0xa2 c.37.1.9 (A:2-33,A:80- 22.4 32 0.0023 26.6 3.4 25 56-80 278-302 (712)
51 d1gwca1 a.45.1.1 (A:87-224) Cl 22.3 23 0.0017 19.5 1.9 31 12-42 104-135 (138)
52 d1nbwa1 c.8.6.1 (A:92-256) Swi 22.0 27 0.002 23.9 2.6 18 60-77 127-144 (165)
53 d1p97a_ d.110.3.7 (A:) Hypoxia 22.0 16 0.0012 19.6 1.2 13 60-72 24-36 (114)
54 d1ppjb2 d.185.1.1 (B:236-439) 21.5 41 0.003 20.5 3.2 35 49-83 93-133 (204)
55 d1utxa_ a.35.1.3 (A:) Putative 21.3 43 0.0031 17.5 2.9 52 20-71 5-59 (66)
56 d1w7ja2 c.37.1.9 (A:63-792) My 20.7 35 0.0025 26.1 3.2 25 56-80 244-268 (730)
57 d1n9la_ d.110.3.6 (A:) Putativ 20.0 30 0.0022 18.6 2.1 14 59-72 23-36 (109)
No 1
>d1uptb_ a.193.1.1 (B:) Golgi autoantigen, golgin-245 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.00 E-value=5.3e-06 Score=51.29 Aligned_cols=48 Identities=15% Similarity=0.488 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHHHHHHhh---hhhccc
Q psy2245 36 TLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQKENIMKT---QAHAWK 84 (88)
Q Consensus 36 nLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek~~V~k~---~~~~Ww 84 (88)
-.|||||++|.||+-+++ ...-+-|.+++.|+++|-+.|..- +.++|-
T Consensus 4 E~EYLRnvLfeYMmG~E~-~tlaKVi~av~kF~~~Q~q~iL~kE~~r~~swl 54 (58)
T d1uptb_ 4 EFEYLRKVLFEYMMGRET-KTMAKVITTVLKFPDDQTQKILEREDARLMSWL 54 (58)
T ss_dssp HHHHHHHHHHHHHTTSSH-HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcch-hHHHHHHHHHHhCCHHHHHHHHHHHhcchhhHH
Confidence 369999999999998874 667788999999999999998643 236674
No 2
>d2croa_ a.35.1.2 (A:) cro 434 {Bacteriophage 434 [TaxId: 10712]}
Probab=76.03 E-value=2 Score=23.21 Aligned_cols=56 Identities=9% Similarity=0.007 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCCCChhhH--HHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHH
Q psy2245 17 HKRRYDALKDTKPPNDAEMT--LQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQK 72 (88)
Q Consensus 17 ~~~r~~~~~~~k~~~D~Ean--LefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek 72 (88)
+-.|+.+++++++....+.+ +.-=++.|-++..+....-.+|..|..+|+.|+++-
T Consensus 4 i~~rlr~~R~~~gltq~~lA~~~gvs~~ti~~~E~g~~~~~~~l~~ia~~l~v~~~~L 61 (65)
T d2croa_ 4 LSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAGVTKRPRFLFEIAMALNCDPVWL 61 (65)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTCCSSCTTHHHHHHHTTSCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcCHhHHHHHHCCCCCCHHHHHHHHHHhCCCHHHH
Confidence 45688888888887755532 222367888888855556689999999999999863
No 3
>d1r69a_ a.35.1.2 (A:) 434 C1 repressor, DNA-binding domain {Bacteriophage 434 [TaxId: 10712]}
Probab=76.01 E-value=2.1 Score=22.82 Aligned_cols=55 Identities=20% Similarity=0.115 Sum_probs=41.0
Q ss_pred HHHHHHHHhCCCCCChhhH--HHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHH
Q psy2245 18 KRRYDALKDTKPPNDAEMT--LQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQK 72 (88)
Q Consensus 18 ~~r~~~~~~~k~~~D~Ean--LefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek 72 (88)
-.|+.+++++++....|.+ +.-=++.|..|.......-.+|..|..+|+.++++-
T Consensus 3 g~rik~~R~~~g~sq~elA~~~gvs~~~is~~E~g~~~~~~~l~~ia~~l~v~~~~l 59 (63)
T d1r69a_ 3 SSRVKSKRIQLGLNQAELAQKVGTTQQSIEQLENGKTKRPRFLPELASALGVSVDWL 59 (63)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSCSSCTTHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHcCCcHHHHHHHhCcCHHHHHHHHCCCCcCHHHHHHHHHHHCcCHHHH
Confidence 4678888888888777733 223357788888855556689999999999999863
No 4
>d2zjr41 g.42.1.1 (4:1-37) Ribosomal protein L36 {Deinococcus radiodurans [TaxId: 1299]}
Probab=74.41 E-value=0.39 Score=26.58 Aligned_cols=9 Identities=44% Similarity=1.106 Sum_probs=7.6
Q ss_pred ccccCCcch
Q psy2245 5 LVCTNPKHN 13 (88)
Q Consensus 5 ~~~~~~~~~ 13 (88)
++|+||+|.
T Consensus 25 ViC~npkHK 33 (37)
T d2zjr41 25 VICSNVKHK 33 (37)
T ss_dssp ECCSSSTTC
T ss_pred EEeCCCCcc
Confidence 579999994
No 5
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=72.27 E-value=2.5 Score=22.98 Aligned_cols=59 Identities=12% Similarity=0.107 Sum_probs=45.0
Q ss_pred hHHHHHHHHHHHHhCCCCCChhhH--HHHHHHHHHHHhc-CccchhhhHHHHHHHhCCCHHH
Q psy2245 13 NLIRHKRRYDALKDTKPPNDAEMT--LQFLKSAIFYFLT-DPVNAQGHLTALLSILGYSDAQ 71 (88)
Q Consensus 13 ~~~~~~~r~~~~~~~k~~~D~Ean--LefLKnaIy~fLT-D~~~~q~hLtAI~sIL~FSp~E 71 (88)
+++++=.++.++++.++....+.+ +..=.+.|..+-+ ...-.-++|-.|...|+.|++|
T Consensus 6 ~~~~~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~~l~v~~~~ 67 (69)
T d1y7ya1 6 DLVKFGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPRE 67 (69)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTSCGGG
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHhHhCCCHHHHHHHHCCCCCCCHHHHHHHHHHhCcCHHH
Confidence 678888999999999988766632 2233667788887 3344678999999999999875
No 6
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.46 E-value=15 Score=20.18 Aligned_cols=46 Identities=11% Similarity=0.132 Sum_probs=37.0
Q ss_pred CCCCChhhHHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHHHH
Q psy2245 28 KPPNDAEMTLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQKEN 74 (88)
Q Consensus 28 k~~~D~EanLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek~~ 74 (88)
++...+| ..+.|++-++.+..+|--..+....|+.-+|.|+.+..+
T Consensus 6 R~~~~~~-~~~iL~~wf~~~~~nPyPs~~e~~~La~~~~l~~~qI~~ 51 (62)
T d1x2na1 6 RGVLPKH-ATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNN 51 (62)
T ss_dssp SCCCCHH-HHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCHH-HHHHHHHHHHHhccCCCcCHHHHHHHHHHHCcCHHHhHH
Confidence 4444444 468999999888888888899999999999999987654
No 7
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=50.75 E-value=15 Score=19.82 Aligned_cols=56 Identities=11% Similarity=0.080 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCCCChhhH--HHHHHHHHHHHhc-CccchhhhHHHHHHHhCCCHHHH
Q psy2245 17 HKRRYDALKDTKPPNDAEMT--LQFLKSAIFYFLT-DPVNAQGHLTALLSILGYSDAQK 72 (88)
Q Consensus 17 ~~~r~~~~~~~k~~~D~Ean--LefLKnaIy~fLT-D~~~~q~hLtAI~sIL~FSp~Ek 72 (88)
+-.|+.+++..++....+.+ +..=++.|-.+.. ...-+-++|..|..+|+.|+.+-
T Consensus 11 ~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~e~g~~~p~~~~l~~ia~~l~v~~~~l 69 (77)
T d2b5aa1 11 FGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTF 69 (77)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCSCCBHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHHH
Confidence 45778888887777655533 3334566666776 34566899999999999999874
No 8
>d2jdid1 a.69.1.1 (D:358-475) F1 ATP synthase beta subunit, domain 3 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=50.47 E-value=5.8 Score=25.81 Aligned_cols=25 Identities=24% Similarity=0.488 Sum_probs=20.3
Q ss_pred hhHHHHHHHhC---CCHHHHHHHHhhhh
Q psy2245 56 GHLTALLSILG---YSDAQKENIMKTQA 80 (88)
Q Consensus 56 ~hLtAI~sIL~---FSp~Ek~~V~k~~~ 80 (88)
.-|.-|.+||| .|+++|..|.|++.
T Consensus 25 keLqdIIaiLG~dELSeeDk~~V~RARk 52 (118)
T d2jdid1 25 KSLQDIIAILGMDELSEEDKLTVSRARK 52 (118)
T ss_dssp HHHHHHHHHHCGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcChhhcCHHHhHHHHHHHH
Confidence 34677788887 59999999999875
No 9
>d1skye1 a.69.1.1 (E:357-470) F1 ATP synthase beta subunit, domain 3 {Bacillus sp., strain ps3 [TaxId: 1409]}
Probab=48.80 E-value=6.3 Score=25.56 Aligned_cols=26 Identities=27% Similarity=0.445 Sum_probs=21.0
Q ss_pred hhhHHHHHHHhC---CCHHHHHHHHhhhh
Q psy2245 55 QGHLTALLSILG---YSDAQKENIMKTQA 80 (88)
Q Consensus 55 q~hLtAI~sIL~---FSp~Ek~~V~k~~~ 80 (88)
-.-|.-|.+||| .|+++|..|.|++.
T Consensus 21 YkeLqDIIaiLG~dELSeeDk~~V~RARk 49 (114)
T d1skye1 21 YKELQDIIAILGMDELSDEDKLVVHRARR 49 (114)
T ss_dssp HHHHHHHHHHHCSTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCchhcCHHHHHHHHHHHH
Confidence 345777888887 59999999999875
No 10
>d1ddga2 c.25.1.4 (A:447-599) Sulfite reductase flavoprotein {Escherichia coli [TaxId: 562]}
Probab=44.96 E-value=18 Score=20.82 Aligned_cols=39 Identities=15% Similarity=0.132 Sum_probs=30.6
Q ss_pred ccccCCcchHHHHHHHHHHHHhCCCCCChhhHHHHHHHH
Q psy2245 5 LVCTNPKHNLIRHKRRYDALKDTKPPNDAEMTLQFLKSA 43 (88)
Q Consensus 5 ~~~~~~~~~~~~~~~r~~~~~~~k~~~D~EanLefLKna 43 (88)
.+|-+|+--.-.+...+.++-.++...+.|.+-+|+++.
T Consensus 104 yiCG~p~~~~~~v~~~L~~~~~~~~~~~~e~a~~~~~~l 142 (153)
T d1ddga2 104 YVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSEL 142 (153)
T ss_dssp EEEECTTTHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred EEECCCcchHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 689988865566677788877777788889888888864
No 11
>d1b0na2 a.35.1.3 (A:1-68) SinR repressor, DNA-binding domain {Bacillus subtilis [TaxId: 1423]}
Probab=42.15 E-value=20 Score=18.89 Aligned_cols=54 Identities=15% Similarity=0.065 Sum_probs=37.1
Q ss_pred HHHHHHHhCCCCCChhhH--HHHHHHHHHHHhcCc--cchhhhHHHHHHHhCCCHHHH
Q psy2245 19 RRYDALKDTKPPNDAEMT--LQFLKSAIFYFLTDP--VNAQGHLTALLSILGYSDAQK 72 (88)
Q Consensus 19 ~r~~~~~~~k~~~D~Ean--LefLKnaIy~fLTD~--~~~q~hLtAI~sIL~FSp~Ek 72 (88)
.|+.+++..++....+.+ +.-=++.|..+-... .-.-.+|.+|..+|+.|+.+-
T Consensus 4 ~~ik~~R~~~gltq~~la~~~gis~~~i~~~E~g~~~~ps~~~l~~ia~~l~v~~~~l 61 (68)
T d1b0na2 4 QRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTL 61 (68)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCCSCCCHHHHHHHHHHHTCCHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCCHHHHHHHHHHHCCcHHHH
Confidence 466777777776655521 222256778888743 346889999999999998763
No 12
>d2qy9a1 a.24.13.1 (A:201-284) Signal recognition particle receptor, FtsY {Escherichia coli [TaxId: 562]}
Probab=41.52 E-value=22 Score=20.01 Aligned_cols=32 Identities=22% Similarity=0.152 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCCCChhhHHHHHHHHHHHHhcC
Q psy2245 19 RRYDALKDTKPPNDAEMTLQFLKSAIFYFLTD 50 (88)
Q Consensus 19 ~r~~~~~~~k~~~D~EanLefLKnaIy~fLTD 50 (88)
..+.+....+...+|+.-.++||+.+...|+.
T Consensus 50 ~~lk~~~~~~~~~~~~~l~~~L~~~i~~iL~~ 81 (84)
T d2qy9a1 50 TNLTEGASRKQLRDAEALYGLLKEEMGEILAK 81 (84)
T ss_dssp HHHHHHHHHTTCCBGGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhcCCCCHHHHHHHHHHHHHHHhch
Confidence 34444445678889999999999999998874
No 13
>d1rfya_ a.2.13.1 (A:) Transcriptional repressor TraM {Agrobacterium tumefaciens [TaxId: 358]}
Probab=40.94 E-value=5 Score=25.45 Aligned_cols=52 Identities=25% Similarity=0.399 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHhC---------CC--CCChhhHHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCH
Q psy2245 13 NLIRHKRRYDALKDT---------KP--PNDAEMTLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSD 69 (88)
Q Consensus 13 ~~~~~~~r~~~~~~~---------k~--~~D~EanLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp 69 (88)
+-||--|++.+--++ |+ ..--.+-|+|+.-.|=- ...-.-++.+++||||.|
T Consensus 26 ~AIr~hR~LvekAd~lFQ~lp~~~k~g~~~gg~qhl~YieA~IEM-----HAQMSAv~tLi~iLG~iP 88 (89)
T d1rfya_ 26 DAIRTHRRLVEKADELFQALPETYKTGQACGGPQHIRYIEASIEM-----HAQMSALNTLISILGFIP 88 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHTTSSCCSHHHHHHHHHHHHH-----HHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHHhcchhccccccCCcHHHHHHHHHHHHH-----HHHHHHHHHHHHHhccCC
Confidence 567878887764321 11 11122668888766522 222234889999999998
No 14
>d1fx0b1 a.69.1.1 (B:378-485) F1 ATP synthase beta subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=40.87 E-value=6.3 Score=25.22 Aligned_cols=26 Identities=19% Similarity=0.457 Sum_probs=21.1
Q ss_pred hhhHHHHHHHhCC---CHHHHHHHHhhhh
Q psy2245 55 QGHLTALLSILGY---SDAQKENIMKTQA 80 (88)
Q Consensus 55 q~hLtAI~sIL~F---Sp~Ek~~V~k~~~ 80 (88)
-.-|.-|.+|||+ |+++|..|.|++.
T Consensus 21 YkeLqdIIailG~dELSeeDk~~v~RArk 49 (108)
T d1fx0b1 21 YKELQDIIAILGLDELSEEDRLTVARARK 49 (108)
T ss_dssp HHHHHHHHHHHCSTTSCTTTHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhcChhhhHHHHHHHH
Confidence 3457788888875 9999999999875
No 15
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.37 E-value=25 Score=18.95 Aligned_cols=45 Identities=18% Similarity=0.113 Sum_probs=34.6
Q ss_pred CChhhHHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHHHHH
Q psy2245 31 NDAEMTLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQKENI 75 (88)
Q Consensus 31 ~D~EanLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek~~V 75 (88)
+-+..++++|++.++..-.+|--..+....|..-+|.|+.+.++=
T Consensus 4 Rft~~q~~~L~~~f~~~~~~pyPs~~e~~~La~~~gL~~~qV~~W 48 (60)
T d1k61a_ 4 RFTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKNW 48 (60)
T ss_dssp SCCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHCCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHCcCHHHHhHH
Confidence 345678899999988766655556777888999999998876653
No 16
>d1u7ka_ a.73.1.1 (A:) AKV capsid {AKV murine leukemia virus [TaxId: 11791]}
Probab=39.75 E-value=21 Score=22.96 Aligned_cols=46 Identities=15% Similarity=0.257 Sum_probs=26.2
Q ss_pred CCChhhHHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHHHHHHhhhh
Q psy2245 30 PNDAEMTLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQKENIMKTQA 80 (88)
Q Consensus 30 ~~D~EanLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek~~V~k~~~ 80 (88)
.-||-....=+++++.-| |+.-.+ ..-|+++| ||+|||+.|.....
T Consensus 31 se~P~~~i~~~~~i~~th--~pTW~D--~q~LL~~l-fT~EEr~ril~ear 76 (131)
T d1u7ka_ 31 SEDPGKLTALIESVLTTH--QPTWDD--CQQLLGTL-LTGEEKQRVLLEAR 76 (131)
T ss_dssp TTCHHHHHHHHHHHHHHT--CCCHHH--HHHHHHHH-SCHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHhcc--CCCHHH--HHHHHHHH-cChHHHHHHHHHHH
Confidence 456766666666654332 553211 22233333 99999999976553
No 17
>d1qgia_ d.2.1.7 (A:) Endochitosanase {Bacillus circulans [TaxId: 1397]}
Probab=38.77 E-value=17 Score=26.04 Aligned_cols=27 Identities=30% Similarity=0.239 Sum_probs=23.4
Q ss_pred hhhhHHHHHHHhCCCHHHHHHHHhhhh
Q psy2245 54 AQGHLTALLSILGYSDAQKENIMKTQA 80 (88)
Q Consensus 54 ~q~hLtAI~sIL~FSp~Ek~~V~k~~~ 80 (88)
.-.+|.+..+-.||+.+.+..||++-.
T Consensus 8 ~P~~~~~~~~~tGld~~~~~~im~Lvs 34 (259)
T d1qgia_ 8 SPETLQFLRNNTGLDGEQWNNIMKLIN 34 (259)
T ss_dssp CHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred CcchhhhcccccCCChHHHHHHHHHhc
Confidence 457889999999999999999998754
No 18
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.83 E-value=31 Score=19.08 Aligned_cols=47 Identities=15% Similarity=0.184 Sum_probs=37.9
Q ss_pred ChhhHHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHHHHHHhh
Q psy2245 32 DAEMTLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQKENIMKT 78 (88)
Q Consensus 32 D~EanLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek~~V~k~ 78 (88)
=+...++.|++.+.....+|--..+....|..-+|.|+.+.++=-..
T Consensus 8 ~t~~q~~~Le~~f~~~~~~pYPs~~~k~~La~~~gl~~~qv~~WF~N 54 (73)
T d1pufb_ 8 FNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGN 54 (73)
T ss_dssp CCHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHCcCHHHhHHHHHH
Confidence 34567899999999888787777888899999999999887754433
No 19
>d2onsa1 c.94.1.1 (A:32-342) Molybdate-binding protein, ModA {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=36.00 E-value=15 Score=20.91 Aligned_cols=32 Identities=25% Similarity=0.402 Sum_probs=21.6
Q ss_pred CCCCChhhHHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCH
Q psy2245 28 KPPNDAEMTLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSD 69 (88)
Q Consensus 28 k~~~D~EanLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp 69 (88)
++..+||++.+||+ ||+.+++ |..+ .=.||.|
T Consensus 260 ~~s~~~eaA~~Fi~-----fl~s~e~-q~~~----~~~G~~P 291 (311)
T d2onsa1 260 KNAENRELAVEFVK-----LVISEEG-QEIL----RELGQEP 291 (311)
T ss_dssp TTCTTHHHHHHHHH-----HHHSHHH-HHHH----HHTTCCE
T ss_pred CCCCCHHHHHHHHH-----HHCCHHH-HHHH----HHcCCcc
Confidence 44567899999986 8898886 4433 2246654
No 20
>d1mgsa_ d.9.1.1 (A:) Melanoma growth stimulating activity (MGSA) {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.96 E-value=15 Score=20.74 Aligned_cols=14 Identities=21% Similarity=0.600 Sum_probs=10.8
Q ss_pred ccccCCcchHHHHH
Q psy2245 5 LVCTNPKHNLIRHK 18 (88)
Q Consensus 5 ~~~~~~~~~~~~~~ 18 (88)
-+|.||+...+.-+
T Consensus 49 ~iC~dP~~~WVkk~ 62 (73)
T d1mgsa_ 49 KACLNPASPIVKKI 62 (73)
T ss_dssp EEEECTTSHHHHHH
T ss_pred EEECCCChHHHHHH
Confidence 68999999876533
No 21
>d2qam41 g.42.1.1 (4:1-38) Ribosomal protein L36 {Escherichia coli [TaxId: 562]}
Probab=34.61 E-value=5.1 Score=21.83 Aligned_cols=9 Identities=44% Similarity=1.346 Sum_probs=7.0
Q ss_pred cccc-CCcch
Q psy2245 5 LVCT-NPKHN 13 (88)
Q Consensus 5 ~~~~-~~~~~ 13 (88)
++|. ||+|.
T Consensus 25 ViCk~nPrHK 34 (38)
T d2qam41 25 VICSAEPKHK 34 (38)
T ss_dssp CCBSSCGGGC
T ss_pred EEeCCCCccc
Confidence 4686 99995
No 22
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=34.54 E-value=14 Score=26.13 Aligned_cols=29 Identities=21% Similarity=0.165 Sum_probs=24.6
Q ss_pred hcCccchhhhHHHHHHHhCCCHHHHHHHH
Q psy2245 48 LTDPVNAQGHLTALLSILGYSDAQKENIM 76 (88)
Q Consensus 48 LTD~~~~q~hLtAI~sIL~FSp~Ek~~V~ 76 (88)
|.||.+.++.=.||...|.-+++||+...
T Consensus 399 lVnP~d~~~~A~ai~~aL~~~~~er~~~~ 427 (456)
T d1uqta_ 399 IVNPYDRDEVAAALDRALTMSLAERISRH 427 (456)
T ss_dssp EECTTCHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred EECcCCHHHHHHHHHHHHcCCHHHHHHHH
Confidence 45888889999999999999999987543
No 23
>d1y9qa1 a.35.1.8 (A:4-82) Probable transcriptional regulator VC1968, N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=33.98 E-value=20 Score=19.34 Aligned_cols=55 Identities=11% Similarity=-0.050 Sum_probs=38.6
Q ss_pred HHHHHHHHHhCCCCCChhh--HHHHHHHHHHHHhcC-ccchhhhHHHHHHHhCCCHHH
Q psy2245 17 HKRRYDALKDTKPPNDAEM--TLQFLKSAIFYFLTD-PVNAQGHLTALLSILGYSDAQ 71 (88)
Q Consensus 17 ~~~r~~~~~~~k~~~D~Ea--nLefLKnaIy~fLTD-~~~~q~hLtAI~sIL~FSp~E 71 (88)
+-.||.+++..++....|. .+..=++.|..+... ..-.-.+|..|...|+.++++
T Consensus 9 ig~~lr~~R~~~g~sq~~lA~~~gis~~~i~~~E~g~~~p~~~~l~~ia~~l~v~~~~ 66 (79)
T d1y9qa1 9 IANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSA 66 (79)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHTTCSCCCHHHHHHHHHHHTCCSGG
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHCcchhHHHHHHcCCCCCCHHHHHHHHHHHCCCHHH
Confidence 4578888888888765552 233335667777773 334688999999999998765
No 24
>d2bl8a1 a.29.8.2 (A:4-103) Enterocine A immunity protein, EntA-Im {Enterococcus faecium [TaxId: 1352]}
Probab=33.40 E-value=11 Score=24.06 Aligned_cols=29 Identities=21% Similarity=0.211 Sum_probs=22.1
Q ss_pred HHHHHHhCCCHHHHHHHHhhhh----hcccccc
Q psy2245 59 TALLSILGYSDAQKENIMKTQA----HAWKYSY 87 (88)
Q Consensus 59 tAI~sIL~FSp~Ek~~V~k~~~----~~Ww~~~ 87 (88)
+|+..=||||++|.+-|.++.. .+|-|.|
T Consensus 58 ~a~~~~lhft~eqe~li~~L~~igk~agLN~vY 90 (100)
T d2bl8a1 58 TAYTNKIRFTEYQEELIRNLSEIGRTAGINGLY 90 (100)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHSCTTTSSCC
T ss_pred HHHHccCCCChHHHHHHHHHHHHHhhcCCceee
Confidence 5777789999999999887755 4565554
No 25
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=33.03 E-value=23 Score=18.47 Aligned_cols=53 Identities=19% Similarity=0.079 Sum_probs=36.0
Q ss_pred HHHHHHHhCCCCCChhhHH--HHHHHHHHHHhc-CccchhhhHHHHHHHhCCCHHH
Q psy2245 19 RRYDALKDTKPPNDAEMTL--QFLKSAIFYFLT-DPVNAQGHLTALLSILGYSDAQ 71 (88)
Q Consensus 19 ~r~~~~~~~k~~~D~EanL--efLKnaIy~fLT-D~~~~q~hLtAI~sIL~FSp~E 71 (88)
.|+.+++++++....+.+- .-=++.+..+.. ...-.-.++..|...|+-|+++
T Consensus 6 ~rik~~R~~~g~tq~~lA~~~gvs~~~i~~~e~g~~~p~~~~l~~ia~~l~v~~~~ 61 (66)
T d2r1jl1 6 ERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDY 61 (66)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHcCCCCCCHHHHHHHHHHhCCCHHH
Confidence 4666777766665555221 122566777777 3445688999999999999875
No 26
>d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]}
Probab=32.75 E-value=21 Score=20.41 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=18.2
Q ss_pred hhHHHHHHHhCCCHHHHHHHHhhhhh
Q psy2245 56 GHLTALLSILGYSDAQKENIMKTQAH 81 (88)
Q Consensus 56 ~hLtAI~sIL~FSp~Ek~~V~k~~~~ 81 (88)
..+..+.. +++|++|++.|+.-.+.
T Consensus 241 ~~~~~~~~-~~l~~~~~~~il~~NA~ 265 (271)
T d2ffia1 241 SAVEQFEA-LGCSAQLRQALLLDTAR 265 (271)
T ss_dssp HHHHHHHH-HCCCHHHHHHHHTHHHH
T ss_pred HHHHHHHh-cCCCHHHHHHHHhHHHH
Confidence 34554444 69999999999877664
No 27
>d1bo0a_ d.9.1.1 (A:) Monocyte chemoattractant protein-3 (MCP-3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.38 E-value=13 Score=20.98 Aligned_cols=21 Identities=14% Similarity=0.333 Sum_probs=13.6
Q ss_pred ccccCCcchHHHHHHHHHHHH
Q psy2245 5 LVCTNPKHNLIRHKRRYDALK 25 (88)
Q Consensus 5 ~~~~~~~~~~~~~~~r~~~~~ 25 (88)
-+|.||+-.-.+.+-+.++.+
T Consensus 50 ~iC~dP~~~WVk~~i~~l~~r 70 (76)
T d1bo0a_ 50 EICADPTQKWVQDFMKHLDKK 70 (76)
T ss_dssp EEEECTTSHHHHHHHHHHHCS
T ss_pred EEeCCCChHHHHHHHHHHHhh
Confidence 599999988766444333333
No 28
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.94 E-value=8.2 Score=22.70 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=25.5
Q ss_pred CCCChhhHHHHHHHH------------HHHHhc---CccchhhhHHHHHHH
Q psy2245 29 PPNDAEMTLQFLKSA------------IFYFLT---DPVNAQGHLTALLSI 64 (88)
Q Consensus 29 ~~~D~EanLefLKna------------Iy~fLT---D~~~~q~hLtAI~sI 64 (88)
...|++.+.+|+++- ||.|.| |.+|=++.++++..+
T Consensus 143 ~~~~~~~~~~~~~~~f~~~~~~~~~~~iy~~~TsA~d~~ni~~vf~~v~d~ 193 (200)
T d1zcba2 143 DPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDT 193 (200)
T ss_dssp CTTCHHHHHHHHHHHHHTTCSSCC--CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHhccCCCCCceEEEEeeeeCcHHHHHHHHHHHHH
Confidence 356788889998875 455566 777777777776543
No 29
>d1eiga_ d.9.1.1 (A:) Eotaxin-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.48 E-value=21 Score=19.99 Aligned_cols=24 Identities=21% Similarity=0.374 Sum_probs=16.3
Q ss_pred ccccCCcchHHHHHHHHHHHHhCC
Q psy2245 5 LVCTNPKHNLIRHKRRYDALKDTK 28 (88)
Q Consensus 5 ~~~~~~~~~~~~~~~r~~~~~~~k 28 (88)
-+|.||+-.-.+-+-+.++.++.+
T Consensus 46 ~vC~dP~~~WVk~~i~~L~~~~~~ 69 (73)
T d1eiga_ 46 QSCGDPKQEWVQRYMKNLDAKQKK 69 (73)
T ss_dssp CEEECTTSHHHHHHHHHHHHHSSC
T ss_pred EEeCCCChHHHHHHHHHHHHhccC
Confidence 589999998776555555544443
No 30
>d1go3f_ a.60.8.2 (F:) RNA polymerase II subunit RBP4 (RpoF) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=30.94 E-value=26 Score=21.31 Aligned_cols=43 Identities=21% Similarity=0.302 Sum_probs=32.0
Q ss_pred CCChhhHHHHHHHHHHHHhcCccchhhhHHHHHHHhCCCHHHHHHHH
Q psy2245 30 PNDAEMTLQFLKSAIFYFLTDPVNAQGHLTALLSILGYSDAQKENIM 76 (88)
Q Consensus 30 ~~D~EanLefLKnaIy~fLTD~~~~q~hLtAI~sIL~FSp~Ek~~V~ 76 (88)
.-.+..||+|+...- -+||+....-...++. +++++.+...|-
T Consensus 31 sye~~~tL~y~~~fa---k~~~e~~~~l~~~L~~-~~~~~~~aakIa 73 (107)
T d1go3f_ 31 SYEQGCALDYLQKFA---KLDKEEAKKLVEELIS-LGIDEKTAVKIA 73 (107)
T ss_dssp CHHHHHHHHHHHHHC---CSCHHHHHHHHHHHHH-TTCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH---cCCHHHHHHHHHHHHh-cCCCHHHHHHHH
Confidence 334558899998755 2288888888888887 589888877663
No 31
>d1zboa1 b.122.1.10 (A:2-198) Hypothetical protein BPP1347 {Bordetella parapertussis [TaxId: 519]}
Probab=30.93 E-value=24 Score=20.73 Aligned_cols=22 Identities=14% Similarity=0.155 Sum_probs=18.5
Q ss_pred hHHHHHHHhCCCHHHHHHHHhh
Q psy2245 57 HLTALLSILGYSDAQKENIMKT 78 (88)
Q Consensus 57 hLtAI~sIL~FSp~Ek~~V~k~ 78 (88)
-...|.++|.++++|||.+...
T Consensus 161 l~~~la~~l~l~~~~kQ~lLE~ 182 (197)
T d1zboa1 161 VADRWAEMLSLPPADKARLLLL 182 (197)
T ss_dssp HHHHHHHHSCCCHHHHHHHHHS
T ss_pred HHHHHHHhCCCCHHHHHHHHCC
Confidence 4567899999999999999864
No 32
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=30.34 E-value=14 Score=19.88 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=26.5
Q ss_pred hcCccchhhhHHHHHHHhCCCHHHHHHHHhhh
Q psy2245 48 LTDPVNAQGHLTALLSILGYSDAQKENIMKTQ 79 (88)
Q Consensus 48 LTD~~~~q~hLtAI~sIL~FSp~Ek~~V~k~~ 79 (88)
|+-..|++-+..-|..-|+.|++|...++.+.
T Consensus 24 l~q~lgRePT~~EiA~~l~~~~e~V~~~l~a~ 55 (57)
T d1l0oc_ 24 LSKTRGRAPTVTEIADHLGISPEDVVLAQEAV 55 (57)
T ss_dssp HHHHHTSCCBHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHcCCCCCHHHHHHHHCcCHHHHHHHHHHh
Confidence 44567788899999999999999998887653
No 33
>d1ha6a_ d.9.1.1 (A:) Macrophage inflammatory protein, MIP {Mouse (Mus musculus), ccl20/mip-3a [TaxId: 10090]}
Probab=29.39 E-value=21 Score=19.99 Aligned_cols=23 Identities=26% Similarity=0.522 Sum_probs=15.6
Q ss_pred ccccCCcchHHHHHHHHHHHHhC
Q psy2245 5 LVCTNPKHNLIRHKRRYDALKDT 27 (88)
Q Consensus 5 ~~~~~~~~~~~~~~~r~~~~~~~ 27 (88)
-+|.||+-.-.+-+-+..+.+..
T Consensus 46 ~iC~dP~~~WVq~~i~~l~~~~k 68 (70)
T d1ha6a_ 46 SVCADPKQNWVKRAVNLLSLRVK 68 (70)
T ss_dssp SEEECTTSHHHHHHHHHHHHHTS
T ss_pred EEeCCCChHHHHHHHHHHHHHhc
Confidence 57999998877655555554443
No 34
>d1oqya2 a.5.2.1 (A:317-360) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.00 E-value=7.6 Score=21.66 Aligned_cols=14 Identities=29% Similarity=0.340 Sum_probs=11.8
Q ss_pred CHHHHHHHHhhhhh
Q psy2245 68 SDAQKENIMKTQAH 81 (88)
Q Consensus 68 Sp~Ek~~V~k~~~~ 81 (88)
||+|+++|.|+.+-
T Consensus 1 T~ee~~aIeRL~~L 14 (44)
T d1oqya2 1 TPQEKEAIERLKAL 14 (44)
T ss_dssp CTTTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHc
Confidence 78999999998763
No 35
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.58 E-value=51 Score=20.50 Aligned_cols=57 Identities=11% Similarity=0.054 Sum_probs=38.1
Q ss_pred cccccCCcchHHHHHHHHHHHHhCCCCCChhh--HHHHHHHHHHHHhcCccchhhhHHHHHHH
Q psy2245 4 GLVCTNPKHNLIRHKRRYDALKDTKPPNDAEM--TLQFLKSAIFYFLTDPVNAQGHLTALLSI 64 (88)
Q Consensus 4 ~~~~~~~~~~~~~~~~r~~~~~~~k~~~D~Ea--nLefLKnaIy~fLTD~~~~q~hLtAI~sI 64 (88)
+||+++-..++.+--..+.++-.. ||+- .--|.-.+.|+.|-|.+....++..++.|
T Consensus 44 ~Lv~S~~~~d~~~gI~lLe~~~~~----~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~i 102 (124)
T d2pqrb1 44 GLIKSTDVNDERLGVKILTDIYKE----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH 102 (124)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHH----CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHcCCcHHHHHHHHHHHHHHHhc----CchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcc
Confidence 567776666666666666666542 3442 34467788899999998877777666655
No 36
>d1xj3a1 d.110.3.2 (A:154-259) Histidine kinase FixL heme domain {Bradyrhizobium japonicum [TaxId: 375]}
Probab=26.52 E-value=20 Score=18.21 Aligned_cols=13 Identities=31% Similarity=0.555 Sum_probs=11.5
Q ss_pred HHHHHHhCCCHHH
Q psy2245 59 TALLSILGYSDAQ 71 (88)
Q Consensus 59 tAI~sIL~FSp~E 71 (88)
.|.+.++|+|++|
T Consensus 17 ~a~~~l~Gy~~~e 29 (106)
T d1xj3a1 17 TAAERLFGWSELE 29 (106)
T ss_dssp HHHHHHHCCCHHH
T ss_pred HHHHHHhhhchHh
Confidence 4788999999998
No 37
>d1whza_ d.50.3.2 (A:) Hypothetical protein TTHA1913 {Thermus thermophilus [TaxId: 274]}
Probab=26.24 E-value=25 Score=19.69 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=18.9
Q ss_pred cchhhhHHHHHHHhCCCHHHHH
Q psy2245 52 VNAQGHLTALLSILGYSDAQKE 73 (88)
Q Consensus 52 ~~~q~hLtAI~sIL~FSp~Ek~ 73 (88)
+-..++|++|+--.|+|.+|=.
T Consensus 47 ei~~gtl~~Ilkqagl~~eef~ 68 (70)
T d1whza_ 47 ELPKGTFKRILRDAGLTEEEFH 68 (70)
T ss_dssp SCCHHHHHHHHHHTTCCHHHHH
T ss_pred ccCHHHHHHHHHHhCCCHHHHH
Confidence 4568999999999999999843
No 38
>d1cyja_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=25.62 E-value=19 Score=19.39 Aligned_cols=19 Identities=26% Similarity=0.643 Sum_probs=13.4
Q ss_pred CCHHHHHHHHh-----hhhhcccc
Q psy2245 67 YSDAQKENIMK-----TQAHAWKY 85 (88)
Q Consensus 67 FSp~Ek~~V~k-----~~~~~Ww~ 85 (88)
+|++|...|.. ++...|.|
T Consensus 67 Lsd~ei~~v~aYi~~~a~~~~w~~ 90 (90)
T d1cyja_ 67 LSEEEIQAVAEYVFKQATDAAWKY 90 (90)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHHHHHHccCCCCCC
Confidence 79999988753 23367876
No 39
>d1t3wa_ a.236.1.1 (A:) DNA primase DnaG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.60 E-value=9 Score=22.88 Aligned_cols=41 Identities=15% Similarity=0.104 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhcCc-cchhhhHHHHHHHhCCCHHHHHHHHhh
Q psy2245 38 QFLKSAIFYFLTDP-VNAQGHLTALLSILGYSDAQKENIMKT 78 (88)
Q Consensus 38 efLKnaIy~fLTD~-~~~q~hLtAI~sIL~FSp~Ek~~V~k~ 78 (88)
+.++++|-+..... ..+.+.|.+-..-=+.|++||+...+.
T Consensus 87 ~ef~d~l~~l~~~~~~~~~~~L~~k~~~~~Lt~eEk~eL~~L 128 (134)
T d1t3wa_ 87 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 128 (134)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCHHHHHHHHHH
Confidence 44455554433321 222333333333337888888766543
No 40
>d2eota_ d.9.1.1 (A:) Eotaxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.57 E-value=30 Score=19.33 Aligned_cols=23 Identities=22% Similarity=0.533 Sum_probs=16.3
Q ss_pred ccccCCcchHHHHHHHHHHHHhC
Q psy2245 5 LVCTNPKHNLIRHKRRYDALKDT 27 (88)
Q Consensus 5 ~~~~~~~~~~~~~~~r~~~~~~~ 27 (88)
-+|.||+-.-.+-+-+.++.+..
T Consensus 48 ~~C~dP~~~WVk~~ik~l~~k~~ 70 (74)
T d2eota_ 48 DICADPKKKWVQDSMKYLDQKSP 70 (74)
T ss_dssp EEEECTTSHHHHHHHHHHHHHCC
T ss_pred EEeCCCChHHHHHHHHHHHhccC
Confidence 68999998877765555555544
No 41
>d2ptaa_ g.3.7.2 (A:) Pandinus toxin {Emperor scorpion (Pandinus imperator), PITX-Ka [TaxId: 55084]}
Probab=24.76 E-value=6 Score=21.25 Aligned_cols=9 Identities=56% Similarity=1.102 Sum_probs=7.0
Q ss_pred ccccCCcch
Q psy2245 5 LVCTNPKHN 13 (88)
Q Consensus 5 ~~~~~~~~~ 13 (88)
+.|||||.-
T Consensus 2 isctnpkqc 10 (35)
T d2ptaa_ 2 ISCTNPKQC 10 (35)
T ss_dssp CCCSSHHHH
T ss_pred cccCChhhh
Confidence 569999864
No 42
>d1ja1a3 c.25.1.4 (A:519-678) NADPH-cytochrome p450 reductase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=24.70 E-value=30 Score=21.17 Aligned_cols=39 Identities=8% Similarity=0.167 Sum_probs=27.5
Q ss_pred ccccCCcchHHHHHHHHHHHHhCCCCCChhhHHHHHHHH
Q psy2245 5 LVCTNPKHNLIRHKRRYDALKDTKPPNDAEMTLQFLKSA 43 (88)
Q Consensus 5 ~~~~~~~~~~~~~~~r~~~~~~~k~~~D~EanLefLKna 43 (88)
.||-+|+-=...+..-+.++-.++...|.+.+-+|+++.
T Consensus 110 YvCG~~~~M~~~V~~~l~~i~~~~~~~~~~~a~~~~~~l 148 (160)
T d1ja1a3 110 YVAGDARNMAKDVQNTFYDIVAEFGPMEHTQAVDYVKKL 148 (160)
T ss_dssp EEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred EEeCCCccchHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 578888755556666676766666677777777887763
No 43
>d1miwa1 a.173.1.1 (A:140-404) tRNA CCA-adding enzyme, C-terminal domains {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.68 E-value=61 Score=19.64 Aligned_cols=33 Identities=9% Similarity=-0.106 Sum_probs=24.0
Q ss_pred CcchHHHHHHHHHHHHhCCCC-CChhhHHHHHHH
Q psy2245 10 PKHNLIRHKRRYDALKDTKPP-NDAEMTLQFLKS 42 (88)
Q Consensus 10 ~~~~~~~~~~r~~~~~~~k~~-~D~EanLefLKn 42 (88)
|.-.+-++...+.+++-+.+. ++.|+.++|||+
T Consensus 223 pGp~iG~il~~l~~~~l~~~~~n~ke~l~~~l~~ 256 (265)
T d1miwa1 223 AGPWVKEALDAIWRAVVNGEVENEKERIYAWLME 256 (265)
T ss_dssp SSHHHHHHHHHHHHHHHTTSSCSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 334456677777777776665 589999999986
No 44
>d1lmb3_ a.35.1.2 (3:) lambda C1 repressor, DNA-binding domain {Bacteriophage lambda [TaxId: 10710]}
Probab=24.44 E-value=31 Score=19.35 Aligned_cols=57 Identities=16% Similarity=0.045 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhCCCCCChhhHHHH--HHHHHHHHhc-CccchhhhHHHHHHHhCCCHHHH
Q psy2245 16 RHKRRYDALKDTKPPNDAEMTLQF--LKSAIFYFLT-DPVNAQGHLTALLSILGYSDAQK 72 (88)
Q Consensus 16 ~~~~r~~~~~~~k~~~D~EanLef--LKnaIy~fLT-D~~~~q~hLtAI~sIL~FSp~Ek 72 (88)
++.+.+.+++++++....+.+-.. =++.|-.+.+ ...-.-..|..|..+|+.++++-
T Consensus 12 ~l~~~i~~~R~~~gltq~~lA~~lgis~~~is~~E~g~~~~s~~~l~~ia~~l~v~~~~~ 71 (87)
T d1lmb3_ 12 RLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINALNAYNAALLAKILKVSVEEF 71 (87)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTSCGGGT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHHhccCCCcHHHHHHHHHHHCCCHHHH
Confidence 445555666777776666533222 2667778888 33456789999999999888653
No 45
>d1icwa_ d.9.1.1 (A:) Interleukin-8, IL-8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.43 E-value=31 Score=19.15 Aligned_cols=14 Identities=21% Similarity=0.434 Sum_probs=10.4
Q ss_pred ccccCCcchHHHHH
Q psy2245 5 LVCTNPKHNLIRHK 18 (88)
Q Consensus 5 ~~~~~~~~~~~~~~ 18 (88)
-+|.||+-..++-+
T Consensus 45 ~vC~dP~~~WVk~~ 58 (69)
T d1icwa_ 45 ELALDPKENWVQRV 58 (69)
T ss_dssp EEEECTTSHHHHHH
T ss_pred EEEcCCChHHHHHH
Confidence 57999998766544
No 46
>d1j8ia_ d.9.1.1 (A:) Lymphotactin {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.69 E-value=34 Score=20.34 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=16.3
Q ss_pred ccccCCcchHHHHHHHHHHHHh
Q psy2245 5 LVCTNPKHNLIRHKRRYDALKD 26 (88)
Q Consensus 5 ~~~~~~~~~~~~~~~r~~~~~~ 26 (88)
-+|.||+..-.+.+-+.++.+.
T Consensus 46 ~iCadP~~~WVq~~ik~Ld~k~ 67 (93)
T d1j8ia_ 46 KVCADPQATWVRDVVRSMDRKS 67 (93)
T ss_dssp EEEECTTCHHHHHHHHHHHHHT
T ss_pred eEeCCCChHHHHHHHHHHHhhc
Confidence 5799999988776666665554
No 47
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.66 E-value=56 Score=17.80 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=20.9
Q ss_pred hHHHHHHHHHHHHhCCCCCChhhHHHH--HHHHHHHHhcCccchh
Q psy2245 13 NLIRHKRRYDALKDTKPPNDAEMTLQF--LKSAIFYFLTDPVNAQ 55 (88)
Q Consensus 13 ~~~~~~~r~~~~~~~k~~~D~EanLef--LKnaIy~fLTD~~~~q 55 (88)
.+.+.|+++...-......+|++.-+| |+ .-|..|+||+-|.
T Consensus 19 eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~-~Ay~vLsdp~~R~ 62 (77)
T d1hdja_ 19 EIKRAYRRQALRYHPDKNKEPGAEEKFKEIA-EAYDVLSDPRKRE 62 (77)
T ss_dssp HHHHHHHHHHHTTCTTTCCCTTHHHHHHHHH-HHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHhccccccchhHHHHHHHHH-HHHHHhcCHHHHH
Confidence 345556665444333333455554332 32 3466677666543
No 48
>d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus niger [TaxId: 5061]}
Probab=23.51 E-value=17 Score=24.05 Aligned_cols=51 Identities=18% Similarity=0.154 Sum_probs=34.0
Q ss_pred CcchHHHHHHHHHHHHhCCCCCC-------hhhHHHHHHHHHHHHhcC--ccchhhhHHH
Q psy2245 10 PKHNLIRHKRRYDALKDTKPPND-------AEMTLQFLKSAIFYFLTD--PVNAQGHLTA 60 (88)
Q Consensus 10 ~~~~~~~~~~r~~~~~~~k~~~D-------~EanLefLKnaIy~fLTD--~~~~q~hLtA 60 (88)
|...|-...+|++..+=..+..+ --.+++|||..+=|..++ =...+.-||+
T Consensus 22 ~~~~~~~l~~~l~~~r~~~~~~~~~~~~~~~g~~~~~~~~l~~~w~~~~dw~~~e~~ln~ 81 (394)
T d1qo7a_ 22 PDEQLDDLKTLVRLSKIAPPTYESLQADGRFGITSEWLTTMREKWLSEFDWRPFEARLNS 81 (394)
T ss_dssp CHHHHHHHHHHHHHCCCCCCCTGGGCTTCTTSSCHHHHHHHHHHHHHTCCHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCCCCCccccCCCccccCCCHHHHHHHHHHhhhcCCHHHHHHHHHc
Confidence 56677788888877653222222 127899999999999984 3445555554
No 49
>d2hyja2 a.121.1.1 (A:83-200) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=23.39 E-value=60 Score=18.04 Aligned_cols=50 Identities=20% Similarity=0.087 Sum_probs=35.8
Q ss_pred HHHHHHHHHhC---CCCCChhhHHHHHHHHHHHHhc------CccchhhhHHHHHHHhC
Q psy2245 17 HKRRYDALKDT---KPPNDAEMTLQFLKSAIFYFLT------DPVNAQGHLTALLSILG 66 (88)
Q Consensus 17 ~~~r~~~~~~~---k~~~D~EanLefLKnaIy~fLT------D~~~~q~hLtAI~sIL~ 66 (88)
+.+.+.+++++ ++..||+..=.+|-.++-..++ |+..-+....||..+|.
T Consensus 58 l~~~l~~a~~~G~i~~~~d~~~lA~~l~~~~~G~~~~~r~~~d~~~l~~a~~a~~~lL~ 116 (118)
T d2hyja2 58 LRADLTAAVDKGELPAGFDVEQALFEIVAAGLALNAAMQLQHDRTAADRARRAIERALA 116 (118)
T ss_dssp HHHHHHHHHHTTSSCTTCCHHHHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHh
Confidence 34555666654 3557999888888888777766 77766778888888774
No 50
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=22.42 E-value=32 Score=26.57 Aligned_cols=25 Identities=24% Similarity=0.381 Sum_probs=20.1
Q ss_pred hhHHHHHHHhCCCHHHHHHHHhhhh
Q psy2245 56 GHLTALLSILGYSDAQKENIMKTQA 80 (88)
Q Consensus 56 ~hLtAI~sIL~FSp~Ek~~V~k~~~ 80 (88)
+++.+-+.+||||++|...|.+.=+
T Consensus 278 ~~~~~al~~lgfs~~e~~~i~~iLa 302 (712)
T d1d0xa2 278 KITRQAMDIVGFSQEEQMSIFKIIA 302 (712)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4567778999999999999976543
No 51
>d1gwca1 a.45.1.1 (A:87-224) Class tau GST {Aegilops tauschii, also known as Triticum tauschii [TaxId: 37682]}
Probab=22.29 E-value=23 Score=19.51 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=22.5
Q ss_pred chHHHHHHHHHHHHh-CCCCCChhhHHHHHHH
Q psy2245 12 HNLIRHKRRYDALKD-TKPPNDAEMTLQFLKS 42 (88)
Q Consensus 12 ~~~~~~~~r~~~~~~-~k~~~D~EanLefLKn 42 (88)
-||.+.+.|+.+.-. .+...|+|.-++|+|.
T Consensus 104 P~l~~w~~~~~~rPav~~~~p~~e~~~~~~k~ 135 (138)
T d1gwca1 104 PLLAAWVERFIELDAAKAALPDVGRLLEFAKA 135 (138)
T ss_dssp HHHHHHHHHHHHSHHHHHHSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCHHHHHHCCCHHHHHHHHHH
Confidence 568888888876554 3345578999999985
No 52
>d1nbwa1 c.8.6.1 (A:92-256) Swiveling domain of the glycerol dehydratase reactivase alpha subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=21.99 E-value=27 Score=23.87 Aligned_cols=18 Identities=17% Similarity=0.425 Sum_probs=15.5
Q ss_pred HHHHHhCCCHHHHHHHHh
Q psy2245 60 ALLSILGYSDAQKENIMK 77 (88)
Q Consensus 60 AI~sIL~FSp~Ek~~V~k 77 (88)
+|.+++++||||-+.|--
T Consensus 127 gIAt~f~L~~eeTk~IvP 144 (165)
T d1nbwa1 127 GIATFFGLSPEETQAIVP 144 (165)
T ss_dssp HHHHHHTCCHHHHHHHHH
T ss_pred HhhhhhCCCHHHhhhhhH
Confidence 599999999999888743
No 53
>d1p97a_ d.110.3.7 (A:) Hypoxia-inducible factor Hif2a, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.97 E-value=16 Score=19.56 Aligned_cols=13 Identities=15% Similarity=0.509 Sum_probs=10.9
Q ss_pred HHHHHhCCCHHHH
Q psy2245 60 ALLSILGYSDAQK 72 (88)
Q Consensus 60 AI~sIL~FSp~Ek 72 (88)
|...|||+|++|-
T Consensus 24 ~~~~~~G~~~~el 36 (114)
T d1p97a_ 24 RITELIGYHPEEL 36 (114)
T ss_dssp THHHHTSSCHHHH
T ss_pred HHHHHcCCCcccc
Confidence 6788999999983
No 54
>d1ppjb2 d.185.1.1 (B:236-439) Cytochrome bc1 core subunit 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=21.55 E-value=41 Score=20.51 Aligned_cols=35 Identities=9% Similarity=0.138 Sum_probs=22.8
Q ss_pred cCccchhhhHHHHHHHh------CCCHHHHHHHHhhhhhcc
Q psy2245 49 TDPVNAQGHLTALLSIL------GYSDAQKENIMKTQAHAW 83 (88)
Q Consensus 49 TD~~~~q~hLtAI~sIL------~FSp~Ek~~V~k~~~~~W 83 (88)
|++.+..+-+++|...| ++|++|-+.+...-..++
T Consensus 93 ~~~~~~~~~~~~i~~el~~l~~~~it~~eL~~aK~~l~~~~ 133 (204)
T d1ppjb2 93 SQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKLKAGY 133 (204)
T ss_dssp EEGGGHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHH
T ss_pred cCcccchhHHHHHHHHHHHHhccccchHHHHHHHHHHHHhH
Confidence 37777777777776654 599999877654333333
No 55
>d1utxa_ a.35.1.3 (A:) Putative transcription regulator CylR2 {Enterococcus faecalis [TaxId: 1351]}
Probab=21.27 E-value=43 Score=17.47 Aligned_cols=52 Identities=10% Similarity=0.058 Sum_probs=31.9
Q ss_pred HHHHHHhCCCCCChhhH--HHHHHHHHHHHhcC-ccchhhhHHHHHHHhCCCHHH
Q psy2245 20 RYDALKDTKPPNDAEMT--LQFLKSAIFYFLTD-PVNAQGHLTALLSILGYSDAQ 71 (88)
Q Consensus 20 r~~~~~~~k~~~D~Ean--LefLKnaIy~fLTD-~~~~q~hLtAI~sIL~FSp~E 71 (88)
|+.+++.+++....|.+ +.-=.+.+-.+-.+ ..-.-.++.+|...|+.|++|
T Consensus 5 ri~~lR~~~g~tq~elA~~~gis~~~is~~e~g~~~p~~~~l~~ia~~l~v~~~~ 59 (66)
T d1utxa_ 5 NLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNTPLED 59 (66)
T ss_dssp CHHHHHHHTTCCHHHHHHHHTSCHHHHHHHHTTSCCCCHHHHHHHHHHTTSCHHH
T ss_pred HHHHHHHHcCCCHHHHHHhcccCHHHHHHHHcCCCCCCHHHHHHHHHHHCCCHHH
Confidence 45566666666655532 22224555666662 234567889999999998876
No 56
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=20.68 E-value=35 Score=26.08 Aligned_cols=25 Identities=24% Similarity=0.300 Sum_probs=19.6
Q ss_pred hhHHHHHHHhCCCHHHHHHHHhhhh
Q psy2245 56 GHLTALLSILGYSDAQKENIMKTQA 80 (88)
Q Consensus 56 ~hLtAI~sIL~FSp~Ek~~V~k~~~ 80 (88)
+++.+-+..||||++|...|.+.=+
T Consensus 244 ~~~~~al~~lG~~~ee~~~i~~iLa 268 (730)
T d1w7ja2 244 VNTRQACTLLGISDSYQMGIFRILA 268 (730)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 4566777889999999999877543
No 57
>d1n9la_ d.110.3.6 (A:) Putative blue light receptor, phot-lov1 domain {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=20.02 E-value=30 Score=18.64 Aligned_cols=14 Identities=14% Similarity=0.442 Sum_probs=11.8
Q ss_pred HHHHHHhCCCHHHH
Q psy2245 59 TALLSILGYSDAQK 72 (88)
Q Consensus 59 tAI~sIL~FSp~Ek 72 (88)
.|.+.++|+|++|-
T Consensus 23 ~a~~~~~Gy~~~El 36 (109)
T d1n9la_ 23 EGFYAMTGYGPDEV 36 (109)
T ss_dssp HHHHHHHCCCHHHH
T ss_pred HHHHHHHCcCHHHH
Confidence 57889999999884
Done!