Your job contains 1 sequence.
>psy2248
VGPSRLSQSQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREM
LRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQSV
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2248
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|B4DJ96 - symbol:LUC7L3 "Luc7-like protein 3" sp... 253 1.1e-21 1
UNIPROTKB|Q3SX41 - symbol:LUC7L3 "Luc7-like protein 3" sp... 253 3.1e-21 1
UNIPROTKB|O95232 - symbol:LUC7L3 "Luc7-like protein 3" sp... 253 3.1e-21 1
UNIPROTKB|F1RTB6 - symbol:LUC7L3 "Uncharacterized protein... 253 3.1e-21 1
UNIPROTKB|Q5R8W6 - symbol:LUC7L3 "Luc7-like protein 3" sp... 253 3.1e-21 1
MGI|MGI:1914934 - symbol:Luc7l3 "LUC7-like 3 (S. cerevisi... 253 3.1e-21 1
UNIPROTKB|E1C6U8 - symbol:LUC7L3 "Uncharacterized protein... 253 3.1e-21 1
RGD|1307981 - symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)"... 253 4.6e-21 1
FB|FBgn0029887 - symbol:CG3198 species:7227 "Drosophila m... 146 2.4e-17 2
TAIR|locus:2163640 - symbol:AT5G51410 "AT5G51410" species... 168 3.7e-12 1
DICTYBASE|DDB_G0278799 - symbol:crop "Luc7 family protein... 137 1.2e-08 1
UNIPROTKB|B8ZZ10 - symbol:LUC7L "LUC7-like (S. cerevisiae... 116 3.8e-07 1
ZFIN|ZDB-GENE-040625-111 - symbol:luc7l "LUC7-like (S. ce... 123 4.0e-07 1
UNIPROTKB|H0YA81 - symbol:LUC7L3 "Luc7-like protein 3" sp... 116 5.5e-07 1
RGD|1308651 - symbol:Luc7l2 "LUC7-like 2 (S. cerevisiae)"... 120 7.1e-07 1
UNIPROTKB|F1LP75 - symbol:Luc7l2 "Protein Luc7l2" species... 120 7.5e-07 1
UNIPROTKB|Q9Y383 - symbol:LUC7L2 "Putative RNA-binding pr... 120 9.7e-07 1
MGI|MGI:2183260 - symbol:Luc7l2 "LUC7-like 2 (S. cerevisi... 120 9.7e-07 1
UNIPROTKB|F1RGX3 - symbol:LUC7L "Uncharacterized protein"... 119 1.1e-06 1
UNIPROTKB|F1NK51 - symbol:LUC7L2 "Uncharacterized protein... 119 1.2e-06 1
UNIPROTKB|G3MY01 - symbol:LUC7L2 "Uncharacterized protein... 120 1.3e-06 1
UNIPROTKB|F1SR21 - symbol:LUC7L2 "Uncharacterized protein... 120 1.3e-06 1
UNIPROTKB|A8MYV2 - symbol:LUC7L "Putative RNA-binding pro... 116 1.3e-06 1
UNIPROTKB|F1LNB8 - symbol:Luc7l "Protein Luc7l" species:1... 115 2.3e-06 1
UNIPROTKB|F1MMH3 - symbol:LUC7L "Uncharacterized protein"... 116 2.4e-06 1
UNIPROTKB|E2R0S7 - symbol:LUC7L "Uncharacterized protein"... 116 2.4e-06 1
UNIPROTKB|Q9NQ29 - symbol:LUC7L "Putative RNA-binding pro... 116 2.4e-06 1
MGI|MGI:1914228 - symbol:Luc7l "Luc7 homolog (S. cerevisi... 116 2.4e-06 1
UNIPROTKB|G3V9R0 - symbol:Luc7l "LUC7-like (S. cerevisiae... 115 2.4e-06 1
UNIPROTKB|F1LNK3 - symbol:Luc7l "Protein Luc7l" species:1... 115 3.0e-06 1
UNIPROTKB|F1NSZ3 - symbol:LUC7L "Uncharacterized protein"... 114 3.6e-06 1
ZFIN|ZDB-GENE-070424-15 - symbol:zgc:158803 "zgc:158803" ... 112 7.9e-06 1
WB|WBGene00015207 - symbol:B0495.8 species:6239 "Caenorha... 106 2.2e-05 1
FB|FBgn0036734 - symbol:CG7564 species:7227 "Drosophila m... 101 0.00012 1
TAIR|locus:2099674 - symbol:UNE6 "unfertilized embryo sac... 96 0.00040 1
TAIR|locus:2157497 - symbol:AT5G17440 "AT5G17440" species... 93 0.00086 1
>UNIPROTKB|B4DJ96 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 UniGene:Hs.130293 HGNC:HGNC:24309
ChiTaRS:LUC7L3 EMBL:AC005921 EMBL:AK295983 IPI:IPI00966213
STRING:B4DJ96 Ensembl:ENST00000544170 UCSC:uc010wmw.2
Uniprot:B4DJ96
Length = 356
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 33 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 92
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 93 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 130
>UNIPROTKB|Q3SX41 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9913 "Bos
taurus" [GO:0008380 "RNA splicing" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 eggNOG:COG5200 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 HOGENOM:HOG000215956 EMBL:BC104519
IPI:IPI00715642 RefSeq:NP_001029856.1 UniGene:Bt.1595 STRING:Q3SX41
PRIDE:Q3SX41 Ensembl:ENSBTAT00000002938 GeneID:539955
KEGG:bta:539955 CTD:51747 InParanoid:Q3SX41 OMA:ISVPLWK
OrthoDB:EOG4QJRNZ NextBio:20878323 Uniprot:Q3SX41
Length = 432
Score = 253 (94.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 109 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 168
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 169 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 206
>UNIPROTKB|O95232 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006950 "response to stress" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=IMP] [GO:0003729 "mRNA binding" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 EMBL:CH471109 eggNOG:COG5200
HOVERGEN:HBG062167 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 HOGENOM:HOG000215956 CTD:51747 OrthoDB:EOG4QJRNZ
EMBL:AB034205 EMBL:DQ013876 EMBL:AK001925 EMBL:AK023672
EMBL:BC056409 EMBL:AF069250 IPI:IPI00107745 IPI:IPI00448519
RefSeq:NP_006098.2 RefSeq:NP_057508.2 UniGene:Hs.130293
ProteinModelPortal:O95232 IntAct:O95232 MINT:MINT-1683180
STRING:O95232 PhosphoSite:O95232 PaxDb:O95232 PeptideAtlas:O95232
PRIDE:O95232 DNASU:51747 Ensembl:ENST00000240304
Ensembl:ENST00000505658 GeneID:51747 KEGG:hsa:51747 UCSC:uc002isq.3
GeneCards:GC17P048796 HGNC:HGNC:24309 HPA:HPA018475 HPA:HPA018484
HPA:HPA020017 MIM:609434 neXtProt:NX_O95232 PharmGKB:PA165432062
InParanoid:O95232 ChiTaRS:LUC7L3 GenomeRNAi:51747 NextBio:55830
ArrayExpress:O95232 Bgee:O95232 Genevestigator:O95232
GermOnline:ENSG00000108848 Uniprot:O95232
Length = 432
Score = 253 (94.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 109 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 168
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 169 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 206
>UNIPROTKB|F1RTB6 [details] [associations]
symbol:LUC7L3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003729 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
OMA:ISVPLWK EMBL:CU655847 RefSeq:XP_003358147.1
Ensembl:ENSSSCT00000019110 GeneID:100625081 KEGG:ssc:100625081
Uniprot:F1RTB6
Length = 432
Score = 253 (94.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 109 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 168
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 169 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 206
>UNIPROTKB|Q5R8W6 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9601 "Pongo
abelii" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006915 "apoptotic process"
evidence=ISS] [GO:0006950 "response to stress" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] GO:GO:0005634
GO:GO:0006915 GO:GO:0006950 GO:GO:0008380 GO:GO:0003677
GO:GO:0016607 GO:GO:0003729 GO:GO:0006397 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 CTD:51747
EMBL:CR859632 RefSeq:NP_001126042.1 UniGene:Pab.18951
ProteinModelPortal:Q5R8W6 PRIDE:Q5R8W6 GeneID:100172991
KEGG:pon:100172991 InParanoid:Q5R8W6 Uniprot:Q5R8W6
Length = 432
Score = 253 (94.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 109 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 168
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 169 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 206
>MGI|MGI:1914934 [details] [associations]
symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0006950 "response to stress"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO]
MGI:MGI:1914934 GO:GO:0005886 GO:GO:0005634 GO:GO:0006915
GO:GO:0006950 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0005925 EMBL:AL645965
eggNOG:COG5200 HOVERGEN:HBG062167 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
HOGENOM:HOG000215956 CTD:51747 OMA:ISVPLWK OrthoDB:EOG4QJRNZ
ChiTaRS:LUC7L3 EMBL:AK014362 EMBL:AK019464 EMBL:AK084714
EMBL:AK151228 EMBL:AK151839 EMBL:AL645846 EMBL:BC009092
IPI:IPI00122418 IPI:IPI00649422 IPI:IPI00752942 RefSeq:NP_080589.1
UniGene:Mm.30927 ProteinModelPortal:Q5SUF2 IntAct:Q5SUF2
STRING:Q5SUF2 PhosphoSite:Q5SUF2 PaxDb:Q5SUF2 PRIDE:Q5SUF2
Ensembl:ENSMUST00000021226 Ensembl:ENSMUST00000107820
Ensembl:ENSMUST00000107821 Ensembl:ENSMUST00000166312 GeneID:67684
KEGG:mmu:67684 UCSC:uc007kyh.1 UCSC:uc007kyi.1 UCSC:uc007kyj.1
NextBio:325251 Bgee:Q5SUF2 CleanEx:MM_3300001P08RIK
Genevestigator:Q5SUF2 GermOnline:ENSMUSG00000020863 Uniprot:Q5SUF2
Length = 432
Score = 253 (94.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 109 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 168
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 169 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 206
>UNIPROTKB|E1C6U8 [details] [associations]
symbol:LUC7L3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003729 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
OMA:ISVPLWK EMBL:AADN02053609 IPI:IPI00820098
Ensembl:ENSGALT00000011942 ArrayExpress:E1C6U8 Uniprot:E1C6U8
Length = 434
Score = 253 (94.1 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 109 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 168
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 169 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 206
>RGD|1307981 [details] [associations]
symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003729 "mRNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005925 "focal adhesion" evidence=ISO]
[GO:0006915 "apoptotic process" evidence=ISO] [GO:0006950 "response
to stress" evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] RGD:1307981
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 IPI:IPI00952314
Ensembl:ENSRNOT00000065737 ArrayExpress:D4A371 Uniprot:D4A371
Length = 477
Score = 253 (94.1 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 58/104 (55%), Positives = 75/104 (72%)
Query: 6 LSQSQQN--------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEE 57
LSQ+QQ+ +N E+I +L++KI+ L+ + E +G EG VE+AQG+MKL +QLKEE
Sbjct: 109 LSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLLQQIEELGSEGKVEEAQGMMKLVEQLKEE 168
Query: 58 REMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
RE+LR + T+E AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 169 RELLRST------TSTIESFAAQEKQMEVCEVCGAFLIVGDAQS 206
>FB|FBgn0029887 [details] [associations]
symbol:CG3198 species:7227 "Drosophila melanogaster"
[GO:0005685 "U1 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISS] EMBL:AE014298 GO:GO:0000398
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 GO:GO:0005685
GeneTree:ENSGT00700000104061 EMBL:AY128494 RefSeq:NP_572337.1
UniGene:Dm.13995 IntAct:Q9W3X8 MINT:MINT-1579912
EnsemblMetazoa:FBtr0070991 GeneID:31602 KEGG:dme:Dmel_CG3198
UCSC:CG3198-RA FlyBase:FBgn0029887 eggNOG:NOG246004
InParanoid:Q9W3X8 OMA:QQNAGGP OrthoDB:EOG4T4BB7 GenomeRNAi:31602
NextBio:774408 Uniprot:Q9W3X8
Length = 438
Score = 146 (56.5 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 32/84 (38%), Positives = 55/84 (65%)
Query: 3 PSRLSQSQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLR 62
P+ LS+ Q EQ+ L+ +IN L+SEAE G+ G V++AQ LM +C++LKEE+E L
Sbjct: 120 PAPLSRHQ-----EQLANLTARINKLLSEAEEAGIRGDVDQAQDLMTVCEELKEEKEQLV 174
Query: 63 KQNDNNHWS-QTVELAAAQEKQME 85
+Q + +H + ++ L + E +++
Sbjct: 175 QQYEAHHKAISSISLTKSAEDELQ 198
Score = 96 (38.9 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 18/23 (78%), Positives = 20/23 (86%)
Query: 78 AAQEKQMEVCTVCGAFLIVGDAQ 100
A EKQM+VC +CGAFLIVGDAQ
Sbjct: 272 AMPEKQMKVCEICGAFLIVGDAQ 294
>TAIR|locus:2163640 [details] [associations]
symbol:AT5G51410 "AT5G51410" species:3702 "Arabidopsis
thaliana" [GO:0003723 "RNA binding" evidence=TAS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB025621
eggNOG:COG5200 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
HOGENOM:HOG000215956 OMA:ISVPLWK EMBL:U78866 EMBL:U78867
EMBL:AY074310 EMBL:AY133837 IPI:IPI00544880 RefSeq:NP_001190514.1
RefSeq:NP_199954.1 RefSeq:NP_851170.1 UniGene:At.68153
UniGene:At.7950 STRING:P94088 PaxDb:P94088 PRIDE:P94088
EnsemblPlants:AT5G51410.1 EnsemblPlants:AT5G51410.2
EnsemblPlants:AT5G51410.3 GeneID:835215 KEGG:ath:AT5G51410
TAIR:At5g51410 InParanoid:P94088 PhylomeDB:P94088
ProtClustDB:CLSN2687400 ArrayExpress:P94088 Genevestigator:P94088
Uniprot:P94088
Length = 334
Score = 168 (64.2 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 35/87 (40%), Positives = 56/87 (64%)
Query: 13 ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNNHWSQ 72
E AEQ+++L EK+ NL+ + E +G EG V++A+ LM+ + L E+ +L ++ +
Sbjct: 126 EKAEQLSVLEEKVKNLLEQVEALGEEGKVDEAEALMRKVEGLNAEKTVLLQRPTDK---- 181
Query: 73 TVELAAAQEKQMEVCTVCGAFLIVGDA 99
LA AQEK+M +C VCG+FL+ DA
Sbjct: 182 --VLAMAQEKKMALCEVCGSFLVANDA 206
>DICTYBASE|DDB_G0278799 [details] [associations]
symbol:crop "Luc7 family protein" species:44689
"Dictyostelium discoideum" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006950 "response to stress" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0006376 "mRNA splice site
selection" evidence=ISS] [GO:0005685 "U1 snRNP" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0006397 "mRNA processing" evidence=IEA]
dictyBase:DDB_G0278799 GO:GO:0006915 GO:GO:0006950
GenomeReviews:CM000152_GR GO:GO:0003729 EMBL:AAFI02000024
GO:GO:0006376 eggNOG:COG5200 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 RefSeq:XP_641972.1 EnsemblProtists:DDB0233514
GeneID:8621704 KEGG:ddi:DDB_G0278799 OMA:HENIAHK GO:GO:0005685
Uniprot:Q54XQ8
Length = 360
Score = 137 (53.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/88 (37%), Positives = 47/88 (53%)
Query: 13 ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNNHWSQ 72
E +IT L KI L+ +AE +G EG + +AQ LM D+LK ++ L K
Sbjct: 144 EQNSKITELDLKIQELLKKAEELGEEGQITEAQALMTEADELKNQKVELEK--------- 194
Query: 73 TVELAAAQEKQMEVCTVCGAFLIVGDAQ 100
+E + K+M VC +CGA L VGD +
Sbjct: 195 -IEQEKNENKRMSVCEICGALLFVGDKE 221
>UNIPROTKB|B8ZZ10 [details] [associations]
symbol:LUC7L "LUC7-like (S. cerevisiae)" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0050733 "RS domain binding" evidence=IEA] GO:GO:0005634
GO:GO:0045843 HOVERGEN:HBG062167 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 HOGENOM:HOG000215956 EMBL:Z69890
EMBL:Z69706 HGNC:HGNC:6723 ChiTaRS:LUC7L IPI:IPI00893219
STRING:B8ZZ10 Ensembl:ENST00000430864 Uniprot:B8ZZ10
Length = 182
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 31 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRAKKKEAEE 85
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 86 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 115
>ZFIN|ZDB-GENE-040625-111 [details] [associations]
symbol:luc7l "LUC7-like (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-040625-111 HOVERGEN:HBG062167 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 HOGENOM:HOG000215956 CTD:55692
EMBL:BC071474 IPI:IPI00971835 RefSeq:NP_001002116.1
UniGene:Dr.77021 ProteinModelPortal:Q6IQD4 PRIDE:Q6IQD4
GeneID:415206 KEGG:dre:415206 InParanoid:Q6IQD4 NextBio:20818875
ArrayExpress:Q6IQD4 Bgee:Q6IQD4 Uniprot:Q6IQD4
Length = 364
Score = 123 (48.4 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 27/100 (27%), Positives = 64/100 (64%)
Query: 5 RLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEER 58
RL+++Q+ + AE++ L+E+I L+++AE++G EG+V++AQ +++ ++++
Sbjct: 107 RLAETQEEISAEVAQKAEKVYELNEEIGKLLAKAEQLGAEGNVDEAQEVLQEVEKVRS-- 164
Query: 59 EMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
RK++ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 165 ---RKKDAEEEYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>UNIPROTKB|H0YA81 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 HGNC:HGNC:24309 ChiTaRS:LUC7L3
EMBL:AC005921 Ensembl:ENST00000504065 Bgee:H0YA81 Uniprot:H0YA81
Length = 207
Score = 116 (45.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 23/24 (95%), Positives = 23/24 (95%)
Query: 78 AAQEKQMEVCTVCGAFLIVGDAQS 101
AAQEKQMEVC VCGAFLIVGDAQS
Sbjct: 3 AAQEKQMEVCEVCGAFLIVGDAQS 26
>RGD|1308651 [details] [associations]
symbol:Luc7l2 "LUC7-like 2 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0019899 "enzyme binding" evidence=IEA;ISO]
RGD:1308651 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
IPI:IPI00948233 Ensembl:ENSRNOT00000047715 UCSC:RGD:1308651
ArrayExpress:F1M7H9 Uniprot:F1M7H9
Length = 330
Score = 120 (47.3 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 29/104 (27%), Positives = 63/104 (60%)
Query: 1 VGPSRLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQL 54
V RL+++Q+ AE++ L+E+I L+++ E++G EG+VE++Q K+ D++
Sbjct: 51 VSKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQ---KVMDEV 107
Query: 55 KEEREMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
++ R +K+ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 108 EKARA--KKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHD 149
>UNIPROTKB|F1LP75 [details] [associations]
symbol:Luc7l2 "Protein Luc7l2" species:10116 "Rattus
norvegicus" [GO:0019899 "enzyme binding" evidence=IEA] RGD:1308651
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 IPI:IPI00557337
Ensembl:ENSRNOT00000008557 ArrayExpress:F1LP75 Uniprot:F1LP75
Length = 340
Score = 120 (47.3 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 29/104 (27%), Positives = 63/104 (60%)
Query: 1 VGPSRLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQL 54
V RL+++Q+ AE++ L+E+I L+++ E++G EG+VE++Q K+ D++
Sbjct: 51 VSKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQ---KVMDEV 107
Query: 55 KEEREMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
++ R +K+ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 108 EKARA--KKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHD 149
>UNIPROTKB|Q9Y383 [details] [associations]
symbol:LUC7L2 "Putative RNA-binding protein Luc7-like 2"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IPI]
GO:GO:0046872 GO:GO:0016607 EMBL:AF151817 EMBL:AF151832
EMBL:AK001476 EMBL:AK001519 EMBL:AK022895 EMBL:AK298166
EMBL:BC017163 EMBL:BC042625 EMBL:BC050708 EMBL:BC056886
IPI:IPI00893216 IPI:IPI01008748 IPI:IPI01012991
RefSeq:NP_001231514.1 RefSeq:NP_001257572.1 RefSeq:NP_057103.2
UniGene:Hs.740446 ProteinModelPortal:Q9Y383 DIP:DIP-32513N
IntAct:Q9Y383 MINT:MINT-5006732 STRING:Q9Y383 PhosphoSite:Q9Y383
DMDM:47116960 PaxDb:Q9Y383 PRIDE:Q9Y383 DNASU:51631
Ensembl:ENST00000263545 Ensembl:ENST00000354926
Ensembl:ENST00000541170 Ensembl:ENST00000545899 GeneID:51631
KEGG:hsa:51631 UCSC:uc003vux.3 UCSC:uc003vuy.3 CTD:51631
GeneCards:GC07P139026 HGNC:HGNC:21608 MIM:613056 neXtProt:NX_Q9Y383
PharmGKB:PA134873425 eggNOG:COG5200 HOVERGEN:HBG062167
InParanoid:Q9Y383 KO:K13212 OrthoDB:EOG4J1192 ChiTaRS:LUC7L2
GenomeRNAi:51631 NextBio:55557 PMAP-CutDB:Q9Y383
ArrayExpress:Q9Y383 Bgee:Q9Y383 CleanEx:HS_LUC7L2
Genevestigator:Q9Y383 GermOnline:ENSG00000146963 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 Uniprot:Q9Y383
Length = 392
Score = 120 (47.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 29/104 (27%), Positives = 63/104 (60%)
Query: 1 VGPSRLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQL 54
V RL+++Q+ AE++ L+E+I L+++ E++G EG+VE++Q K+ D++
Sbjct: 103 VAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQ---KVMDEV 159
Query: 55 KEEREMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
++ R +K+ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 160 EKARA--KKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>MGI|MGI:2183260 [details] [associations]
symbol:Luc7l2 "LUC7-like 2 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] MGI:MGI:2183260 GO:GO:0046872 GO:GO:0016607 CTD:51631
eggNOG:COG5200 HOVERGEN:HBG062167 KO:K13212 OrthoDB:EOG4J1192
ChiTaRS:LUC7L2 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
EMBL:AF318301 EMBL:BC002314 EMBL:BC056354 EMBL:BC056383
EMBL:BC056970 IPI:IPI00380309 IPI:IPI00410886 IPI:IPI00410887
RefSeq:NP_001164320.1 RefSeq:NP_619621.2 UniGene:Mm.276133
UniGene:Mm.479854 UniGene:Mm.482221 ProteinModelPortal:Q7TNC4
IntAct:Q7TNC4 STRING:Q7TNC4 PhosphoSite:Q7TNC4 PaxDb:Q7TNC4
PRIDE:Q7TNC4 Ensembl:ENSMUST00000057692 Ensembl:ENSMUST00000161538
GeneID:192196 KEGG:mmu:192196 UCSC:uc009bkk.2 UCSC:uc009bkm.2
UCSC:uc009bkt.2 GeneTree:ENSGT00700000104035 HOGENOM:HOG000215956
InParanoid:Q7TNC4 OMA:SHQRSGH NextBio:371230 Bgee:Q7TNC4
CleanEx:MM_LUC7L2 Genevestigator:Q7TNC4
GermOnline:ENSMUSG00000029823 Uniprot:Q7TNC4
Length = 392
Score = 120 (47.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 29/104 (27%), Positives = 63/104 (60%)
Query: 1 VGPSRLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQL 54
V RL+++Q+ AE++ L+E+I L+++ E++G EG+VE++Q K+ D++
Sbjct: 103 VSKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQ---KVMDEV 159
Query: 55 KEEREMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
++ R +K+ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 160 EKARA--KKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>UNIPROTKB|F1RGX3 [details] [associations]
symbol:LUC7L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050733 "RS domain binding" evidence=IEA] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
GO:GO:0045843 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:HESTNGK EMBL:FP102907
RefSeq:XP_003481128.1 Ensembl:ENSSSCT00000008742 GeneID:100737615
KEGG:ssc:100737615 Uniprot:F1RGX3
Length = 371
Score = 119 (46.9 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/90 (26%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ RK+
Sbjct: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRARKKEAEE 171
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>UNIPROTKB|F1NK51 [details] [associations]
symbol:LUC7L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0019899 "enzyme binding" evidence=IEA]
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:SHQRSGH EMBL:AADN02006040
IPI:IPI00575719 Ensembl:ENSGALT00000019344 ArrayExpress:F1NK51
Uniprot:F1NK51
Length = 378
Score = 119 (46.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/104 (26%), Positives = 64/104 (61%)
Query: 1 VGPSRLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQL 54
V RL+++Q+ AE++ L+E+I L+++ E++G +G+VE++Q K+ D++
Sbjct: 83 VAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGADGNVEESQ---KVMDEV 139
Query: 55 KEEREMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
++ R ++K+ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 140 EKAR--VKKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHD 181
>UNIPROTKB|G3MY01 [details] [associations]
symbol:LUC7L2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019899 "enzyme binding" evidence=IEA]
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:SHQRSGH EMBL:DAAA02011719
Ensembl:ENSBTAT00000064335 Uniprot:G3MY01
Length = 458
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/104 (27%), Positives = 63/104 (60%)
Query: 1 VGPSRLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQL 54
V RL+++Q+ AE++ L+E+I L+++ E++G EG+VE++Q K+ D++
Sbjct: 169 VAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQ---KVMDEV 225
Query: 55 KEEREMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
++ R +K+ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 226 EKARA--KKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHD 267
>UNIPROTKB|F1SR21 [details] [associations]
symbol:LUC7L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019899 "enzyme binding" evidence=IEA]
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:SHQRSGH EMBL:CU928606
RefSeq:XP_003484055.1 Ensembl:ENSSSCT00000017974 GeneID:100516708
KEGG:ssc:100516708 Uniprot:F1SR21
Length = 458
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 29/104 (27%), Positives = 63/104 (60%)
Query: 1 VGPSRLSQSQQN------ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQL 54
V RL+++Q+ AE++ L+E+I L+++ E++G EG+VE++Q K+ D++
Sbjct: 169 VAKKRLAETQEEISAEVAAKAERVHELNEEIGKLLAKVEQLGAEGNVEESQ---KVMDEV 225
Query: 55 KEEREMLRKQNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
++ R +K+ + ++ ++ Q++++ VC VC A+L + D
Sbjct: 226 EKARA--KKREAEEVYRNSMPASSFQQQKLRVCEVCSAYLGLHD 267
>UNIPROTKB|A8MYV2 [details] [associations]
symbol:LUC7L "Putative RNA-binding protein Luc7-like 1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=IEA] [GO:0050733 "RS domain binding"
evidence=IEA] GO:GO:0005634 EMBL:CH471112 GO:GO:0045843
OrthoDB:EOG4J1192 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
HOGENOM:HOG000215956 EMBL:Z69890 EMBL:Z69706 UniGene:Hs.16803
HGNC:HGNC:6723 ChiTaRS:LUC7L IPI:IPI00853373 STRING:A8MYV2
Ensembl:ENST00000397780 HOVERGEN:HBG055723 Uniprot:A8MYV2
Length = 272
Score = 116 (45.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 64 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRAKKKEAEE 118
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 119 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 148
>UNIPROTKB|F1LNB8 [details] [associations]
symbol:Luc7l "Protein Luc7l" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=IEA] [GO:0050733 "RS domain binding" evidence=IEA]
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 EMBL:AC096051
IPI:IPI00206005 PRIDE:F1LNB8 Ensembl:ENSRNOT00000027812 RGD:1307542
ArrayExpress:F1LNB8 Uniprot:F1LNB8
Length = 318
Score = 115 (45.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 64 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRSKKKEAEE 118
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 119 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 148
>UNIPROTKB|F1MMH3 [details] [associations]
symbol:LUC7L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050733 "RS domain binding" evidence=IEA] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
GO:GO:0045843 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:HESTNGK EMBL:DAAA02057271
IPI:IPI00686936 UniGene:Bt.39454 Ensembl:ENSBTAT00000022041
Uniprot:F1MMH3
Length = 371
Score = 116 (45.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRAKKKEAEE 171
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>UNIPROTKB|E2R0S7 [details] [associations]
symbol:LUC7L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050733 "RS domain binding" evidence=IEA]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
GO:GO:0005634 GO:GO:0045843 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 GeneTree:ENSGT00700000104035 CTD:55692 OMA:HESTNGK
EMBL:AAEX03004695 RefSeq:XP_537024.2 Ensembl:ENSCAFT00000031307
GeneID:479898 KEGG:cfa:479898 Uniprot:E2R0S7
Length = 371
Score = 116 (45.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRAKKKEAEE 171
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>UNIPROTKB|Q9NQ29 [details] [associations]
symbol:LUC7L "Putative RNA-binding protein Luc7-like 1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0045843 "negative regulation of striated muscle tissue
development" evidence=IEA] [GO:0050733 "RS domain binding"
evidence=IEA] GO:GO:0005634 GO:GO:0046872 EMBL:AE006462
EMBL:CH471112 GO:GO:0045843 eggNOG:COG5200 HOVERGEN:HBG062167
OrthoDB:EOG4J1192 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
HOGENOM:HOG000215956 EMBL:AJ404326 EMBL:AY005111 EMBL:AK001093
EMBL:Z69890 EMBL:Z69706 EMBL:BC003194 EMBL:BC065198 IPI:IPI00071318
IPI:IPI00410026 IPI:IPI00410027 RefSeq:NP_060502.1
RefSeq:NP_958815.1 UniGene:Hs.16803 ProteinModelPortal:Q9NQ29
IntAct:Q9NQ29 MINT:MINT-3071845 STRING:Q9NQ29 PhosphoSite:Q9NQ29
DMDM:47116932 PaxDb:Q9NQ29 PRIDE:Q9NQ29 DNASU:55692
Ensembl:ENST00000293872 Ensembl:ENST00000337351
Ensembl:ENST00000397783 GeneID:55692 KEGG:hsa:55692 UCSC:uc002cga.1
CTD:55692 GeneCards:GC16M000238 HGNC:HGNC:6723 HPA:CAB033659
MIM:607782 neXtProt:NX_Q9NQ29 PharmGKB:PA30485 InParanoid:Q9NQ29
OMA:HESTNGK ChiTaRS:LUC7L GenomeRNAi:55692 NextBio:60505
ArrayExpress:Q9NQ29 Bgee:Q9NQ29 CleanEx:HS_LUC7L
Genevestigator:Q9NQ29 GermOnline:ENSG00000007392 Uniprot:Q9NQ29
Length = 371
Score = 116 (45.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRAKKKEAEE 171
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>MGI|MGI:1914228 [details] [associations]
symbol:Luc7l "Luc7 homolog (S. cerevisiae)-like"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050733 "RS domain binding" evidence=IPI] MGI:MGI:1914228
GO:GO:0005634 GO:GO:0046872 GO:GO:0045843 eggNOG:COG5200
HOVERGEN:HBG062167 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 GeneTree:ENSGT00700000104035 HOGENOM:HOG000215956
CTD:55692 OMA:HESTNGK ChiTaRS:LUC7L EMBL:AK010539 EMBL:AK017655
EMBL:BC034135 IPI:IPI00410804 IPI:IPI00410805 RefSeq:NP_080157.1
RefSeq:NP_082466.2 UniGene:Mm.440216 ProteinModelPortal:Q9CYI4
STRING:Q9CYI4 PhosphoSite:Q9CYI4 PaxDb:Q9CYI4 PRIDE:Q9CYI4
Ensembl:ENSMUST00000025023 Ensembl:ENSMUST00000114976
Ensembl:ENSMUST00000119928 GeneID:66978 KEGG:mmu:66978
UCSC:uc008bdy.1 UCSC:uc008bdz.1 InParanoid:Q9CYI4 NextBio:323200
Bgee:Q9CYI4 CleanEx:MM_LUC7L Genevestigator:Q9CYI4
GermOnline:ENSMUSG00000024188 Uniprot:Q9CYI4
Length = 371
Score = 116 (45.9 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRAKKKEAEE 171
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>UNIPROTKB|G3V9R0 [details] [associations]
symbol:Luc7l "LUC7-like (S. cerevisiae), isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0050733 "RS domain binding"
evidence=IEA] EMBL:CH473948 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 GeneTree:ENSGT00700000104035 EMBL:AC096051 RGD:1307542
UniGene:Rn.99992 Ensembl:ENSRNOT00000060078 Uniprot:G3V9R0
Length = 325
Score = 115 (45.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 117 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRSKKKEAEE 171
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 172 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 201
>UNIPROTKB|F1LNK3 [details] [associations]
symbol:Luc7l "Protein Luc7l" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045843
"negative regulation of striated muscle tissue development"
evidence=IEA] [GO:0050733 "RS domain binding" evidence=IEA]
GO:GO:0005634 GO:GO:0045843 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 EMBL:AC096051 RGD:1307542 IPI:IPI00947946 PRIDE:F1LNK3
Ensembl:ENSRNOT00000065856 ArrayExpress:F1LNK3 Uniprot:F1LNK3
Length = 362
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 23/90 (25%), Positives = 57/90 (63%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E+I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 154 AEVSAKAEKVHELNEEIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRSKKKEAEE 208
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 209 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 238
>UNIPROTKB|F1NSZ3 [details] [associations]
symbol:LUC7L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0050733 "RS domain binding" evidence=IEA] GO:GO:0005634
GO:GO:0045843 InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:HESTNGK EMBL:AADN02049282
EMBL:AADN02049283 EMBL:AADN02049284 EMBL:AADN02049285
EMBL:AADN02049286 EMBL:AADN02049287 EMBL:AADN02049288
EMBL:AADN02049289 IPI:IPI00576001 Ensembl:ENSGALT00000012185
Uniprot:F1NSZ3
Length = 350
Score = 114 (45.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 23/90 (25%), Positives = 56/90 (62%)
Query: 9 SQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNN 68
++ + AE++ L+E I L+++AE++G EG+V+++Q ++ ++ E+ +K+
Sbjct: 97 AEVSAKAEKVHELNEDIGKLLAKAEQLGAEGNVDESQKIL-----MEVEKVRAKKKEAEE 151
Query: 69 HWSQTVELAAAQEKQMEVCTVCGAFLIVGD 98
+ ++ ++ Q++++ VC VC A+L + D
Sbjct: 152 EYRNSMPASSFQQQKLRVCEVCSAYLGLHD 181
>ZFIN|ZDB-GENE-070424-15 [details] [associations]
symbol:zgc:158803 "zgc:158803" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] ZFIN:ZDB-GENE-070424-15
eggNOG:COG5200 OrthoDB:EOG4J1192 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
EMBL:CU467849 EMBL:BC133161 IPI:IPI00770982 RefSeq:NP_001083016.1
UniGene:Dr.82341 Ensembl:ENSDART00000100619 GeneID:100038767
KEGG:dre:100038767 OMA:YDRRRSH NextBio:20788555 Uniprot:A3KMT0
Length = 417
Score = 112 (44.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 25/84 (29%), Positives = 53/84 (63%)
Query: 15 AEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNNHWSQTV 74
AE++ L+E+I L++ AE++G EG+V++AQ +++ K E+ K+ + + ++
Sbjct: 123 AERVHELNEEIGKLLARAEQLGGEGNVDEAQQVLE-----KVEKTRTLKKEAEDIYRNSM 177
Query: 75 ELAAAQEKQMEVCTVCGAFLIVGD 98
++ Q++++ VC VC A+L + D
Sbjct: 178 PASSFQQQKLRVCEVCSAYLGLHD 201
>WB|WBGene00015207 [details] [associations]
symbol:B0495.8 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] GO:GO:0009792 EMBL:FO080132 eggNOG:COG5200
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 OMA:HESTNGK PIR:E88216
RefSeq:NP_741025.1 ProteinModelPortal:Q09217 PaxDb:Q09217
PRIDE:Q09217 EnsemblMetazoa:B0495.8a.1 EnsemblMetazoa:B0495.8a.2
GeneID:174246 KEGG:cel:CELE_B0495.8 UCSC:B0495.8a CTD:174246
WormBase:B0495.8a HOGENOM:HOG000019877 InParanoid:Q09217
NextBio:883201 ArrayExpress:Q09217 Uniprot:Q09217
Length = 313
Score = 106 (42.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 4 SRLSQSQQNENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRK 63
++ SQ+ ++ A+Q+ + EKI V + E++G EG +E++ MKL ++E RE +++
Sbjct: 113 TQTSQAADSK-AKQVAEIEEKIAKNVDDIEKLGNEGKIEES---MKLHKYVEELREKIQE 168
Query: 64 QNDNNHWSQTVELAAAQEKQMEVCTVCGAFLIVGDAQS 101
D+ +T + K + VC CGA L + D +S
Sbjct: 169 IEDSQTEVKTAGPGSNSAK-LRVCEDCGAQLNITDHES 205
>FB|FBgn0036734 [details] [associations]
symbol:CG7564 species:7227 "Drosophila melanogaster"
[GO:0005685 "U1 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] EMBL:AE014296 GO:GO:0071011
GO:GO:0000398 eggNOG:COG5200 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 GeneTree:ENSGT00700000104035 GO:GO:0005685
EMBL:BT021417 RefSeq:NP_648991.1 UniGene:Dm.18731 DIP:DIP-17657N
IntAct:Q9VVI1 MINT:MINT-893743 STRING:Q9VVI1
EnsemblMetazoa:FBtr0075175 EnsemblMetazoa:FBtr0331842 GeneID:39956
KEGG:dme:Dmel_CG7564 UCSC:CG7564-RA FlyBase:FBgn0036734
InParanoid:Q9VVI1 OMA:NDRSADR OrthoDB:EOG4VT4D5 ChiTaRS:CG7564
GenomeRNAi:39956 NextBio:816262 Uniprot:Q9VVI1
Length = 420
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 23/86 (26%), Positives = 51/86 (59%)
Query: 13 ENAEQITLLSEKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNNHWSQ 72
E A + L+E+I +++AE +G G VE + LMK ++L+ ++ ++ +++ +
Sbjct: 126 EKANAVHGLAEEIGKKLAKAEALGEAGEVEDSMELMKEIEELRAKK--IKAEHE---YRT 180
Query: 73 TVELAAAQEKQMEVCTVCGAFLIVGD 98
++ + Q++++ VC VC A+L + D
Sbjct: 181 SMPASTYQQQKLRVCEVCSAYLGIHD 206
>TAIR|locus:2099674 [details] [associations]
symbol:UNE6 "unfertilized embryo sac 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0008284
"positive regulation of cell proliferation" evidence=RCA]
GO:GO:0005829 EMBL:CP002686 GO:GO:0009567 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 IPI:IPI00532497 RefSeq:NP_566203.2
UniGene:At.40999 PRIDE:F4IZU3 EnsemblPlants:AT3G03340.1
GeneID:821276 KEGG:ath:AT3G03340 OMA:KEADIHD Uniprot:F4IZU3
Length = 402
Score = 96 (38.9 bits), Expect = 0.00040, P = 0.00040
Identities = 23/77 (29%), Positives = 43/77 (55%)
Query: 23 EKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNNHWSQTVELAAAQEK 82
E IN + +AE +G +G V++AQ ++ + LK+ D+ ++ V++ +K
Sbjct: 208 EMINEKLKKAEDLGEQGMVDEAQKALEEAEALKKLTVRREPPADSTKYT-AVDVRITDQK 266
Query: 83 QMEVCTVCGAFLIVGDA 99
+ +C +CGAFL V D+
Sbjct: 267 -LRLCDICGAFLSVYDS 282
>TAIR|locus:2157497 [details] [associations]
symbol:AT5G17440 "AT5G17440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=RCA] EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG5200 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 HOGENOM:HOG000215956 OMA:HESTNGK
EMBL:AY052667 EMBL:AY063725 IPI:IPI00516944 RefSeq:NP_568347.1
UniGene:At.20105 PaxDb:Q940U9 PRIDE:Q940U9
EnsemblPlants:AT5G17440.1 GeneID:831610 KEGG:ath:AT5G17440
TAIR:At5g17440 InParanoid:Q940U9 PhylomeDB:Q940U9
ProtClustDB:CLSN2689741 Genevestigator:Q940U9 Uniprot:Q940U9
Length = 404
Score = 93 (37.8 bits), Expect = 0.00086, P = 0.00086
Identities = 22/77 (28%), Positives = 42/77 (54%)
Query: 23 EKINNLVSEAERVGMEGSVEKAQGLMKLCDQLKEEREMLRKQNDNNHWSQTVELAAAQEK 82
E IN + +AE +G +G V++AQ ++ + LK+ D+ ++ ++ +K
Sbjct: 208 EMINEKLKKAEELGEQGMVDEAQKALEEAEALKKLTARQEPVVDSTKYT-AADVRITDQK 266
Query: 83 QMEVCTVCGAFLIVGDA 99
+ +C +CGAFL V D+
Sbjct: 267 -LRLCDICGAFLSVYDS 282
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.124 0.332 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 102 0.00091 102 3 10 23 0.47 30
29 0.48 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 569 (61 KB)
Total size of DFA: 148 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.98u 0.09s 21.07t Elapsed: 00:00:04
Total cpu time: 20.98u 0.09s 21.07t Elapsed: 00:00:04
Start: Thu Aug 15 15:54:27 2013 End: Thu Aug 15 15:54:31 2013