Query psy226
Match_columns 406
No_of_seqs 473 out of 2993
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 20:10:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1E-74 3.5E-79 550.5 44.6 406 1-406 1-410 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 1.6E-54 5.4E-59 401.4 49.2 329 56-404 4-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 3.9E-54 1.3E-58 395.5 42.6 288 101-406 27-320 (321)
4 2pbi_B Guanine nucleotide-bind 100.0 1.3E-52 4.5E-57 390.6 48.2 289 98-404 56-354 (354)
5 2ynn_A Coatomer subunit beta'; 100.0 8.8E-53 3E-57 383.6 44.3 291 98-405 5-300 (304)
6 3iz6_a 40S ribosomal protein R 100.0 5.6E-53 1.9E-57 397.0 37.4 291 98-406 58-374 (380)
7 4ery_A WD repeat-containing pr 100.0 2.1E-50 7.3E-55 368.9 46.2 295 93-405 10-310 (312)
8 4gqb_B Methylosome protein 50; 100.0 1.5E-51 5.3E-56 381.4 35.9 284 103-406 27-330 (344)
9 3frx_A Guanine nucleotide-bind 100.0 3.4E-50 1.2E-54 369.0 44.3 285 100-405 11-315 (319)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.1E-50 7.2E-55 374.5 42.1 290 99-406 8-334 (345)
11 2hes_X YDR267CP; beta-propelle 100.0 5.9E-50 2E-54 369.1 41.3 290 98-406 6-327 (330)
12 1erj_A Transcriptional repress 100.0 1.3E-49 4.5E-54 375.7 44.1 283 104-406 62-388 (393)
13 4g56_B MGC81050 protein; prote 100.0 7.2E-51 2.4E-55 379.3 33.4 285 103-406 39-342 (357)
14 2xzm_R RACK1; ribosome, transl 100.0 4.4E-49 1.5E-53 365.3 42.9 285 99-405 14-338 (343)
15 1nr0_A Actin interacting prote 100.0 5.9E-49 2E-53 392.0 41.2 305 100-405 141-565 (611)
16 2ymu_A WD-40 repeat protein; u 100.0 3.8E-47 1.3E-51 376.2 44.3 284 97-404 294-577 (577)
17 1nr0_A Actin interacting prote 100.0 2.9E-47 1E-51 379.7 41.8 287 98-405 51-395 (611)
18 3zwl_B Eukaryotic translation 100.0 3.6E-46 1.2E-50 347.4 46.0 290 97-406 23-345 (369)
19 4aow_A Guanine nucleotide-bind 100.0 5.7E-46 2E-50 342.8 44.7 288 99-406 31-336 (340)
20 2ynn_A Coatomer subunit beta'; 100.0 1.9E-46 6.4E-51 341.7 37.7 251 139-406 4-258 (304)
21 3dm0_A Maltose-binding peripla 100.0 3.5E-46 1.2E-50 377.5 43.7 287 100-406 376-692 (694)
22 1sq9_A Antiviral protein SKI8; 100.0 8.7E-47 3E-51 356.1 35.4 286 100-406 10-394 (397)
23 3ow8_A WD repeat-containing pr 100.0 1.5E-45 5E-50 338.4 39.7 247 100-364 74-320 (321)
24 1gxr_A ESG1, transducin-like e 100.0 5.1E-45 1.7E-49 335.6 42.8 286 98-405 43-335 (337)
25 2ymu_A WD-40 repeat protein; u 100.0 6.3E-45 2.2E-49 360.3 46.0 286 96-405 252-537 (577)
26 1vyh_C Platelet-activating fac 100.0 1E-45 3.4E-50 351.1 37.3 248 99-364 143-410 (410)
27 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-45 4.8E-50 344.4 37.8 285 102-405 4-359 (372)
28 3k26_A Polycomb protein EED; W 100.0 2.6E-46 8.8E-51 348.2 32.5 286 101-406 13-365 (366)
29 3ei3_B DNA damage-binding prot 100.0 1.5E-45 5.1E-50 346.4 36.8 285 99-406 66-381 (383)
30 3odt_A Protein DOA1; ubiquitin 100.0 1E-44 3.5E-49 330.3 40.6 282 97-406 9-295 (313)
31 3gre_A Serine/threonine-protei 100.0 2.2E-45 7.4E-50 351.4 36.1 298 91-404 47-437 (437)
32 1r5m_A SIR4-interacting protei 100.0 6.2E-45 2.1E-49 345.6 38.4 281 105-406 107-424 (425)
33 4gga_A P55CDC, cell division c 100.0 1E-43 3.5E-48 338.4 45.5 294 90-405 86-393 (420)
34 3i2n_A WD repeat-containing pr 100.0 1.4E-45 4.7E-50 342.3 31.5 292 99-406 11-352 (357)
35 4gqb_B Methylosome protein 50; 100.0 2E-44 6.7E-49 333.7 37.2 246 103-367 79-333 (344)
36 3dwl_C Actin-related protein 2 100.0 1.3E-46 4.5E-51 352.6 22.1 284 102-405 7-377 (377)
37 1r5m_A SIR4-interacting protei 100.0 2.2E-44 7.4E-49 341.9 36.4 283 102-405 41-359 (425)
38 2pm9_A Protein WEB1, protein t 100.0 1.5E-45 5.2E-50 349.6 27.7 286 103-405 64-412 (416)
39 4aez_A CDC20, WD repeat-contai 100.0 1.3E-43 4.5E-48 335.5 38.7 287 100-406 85-379 (401)
40 4e54_B DNA damage-binding prot 100.0 1.5E-44 5E-49 345.8 32.2 286 101-406 114-429 (435)
41 1got_B GT-beta; complex (GTP-b 100.0 3.7E-43 1.3E-47 325.0 39.2 245 99-362 90-340 (340)
42 2j04_B YDR362CP, TAU91; beta p 100.0 1.8E-45 6E-50 357.8 24.5 283 105-406 132-516 (524)
43 3v7d_B Cell division control p 100.0 7E-43 2.4E-47 336.6 42.2 283 97-406 112-420 (464)
44 3vl1_A 26S proteasome regulato 100.0 8E-44 2.7E-48 338.4 34.7 298 107-406 57-364 (420)
45 3sfz_A APAF-1, apoptotic pepti 100.0 4.2E-43 1.5E-47 376.6 43.6 310 97-406 606-1033(1249)
46 2pm9_A Protein WEB1, protein t 100.0 4.1E-45 1.4E-49 346.6 24.1 285 105-406 11-336 (416)
47 2pm7_B Protein transport prote 100.0 2.9E-43 9.8E-48 319.6 34.9 259 142-405 3-283 (297)
48 4ggc_A P55CDC, cell division c 100.0 8.1E-42 2.8E-46 312.0 44.7 296 91-406 7-314 (318)
49 3mkq_A Coatomer beta'-subunit; 100.0 5.1E-43 1.7E-47 360.3 40.4 290 99-405 6-300 (814)
50 4h5i_A Guanine nucleotide-exch 100.0 7.4E-44 2.5E-48 332.9 30.8 279 106-406 14-342 (365)
51 2pm7_B Protein transport prote 100.0 6E-43 2.1E-47 317.4 34.8 250 100-364 3-284 (297)
52 1p22_A F-BOX/WD-repeat protein 100.0 1E-42 3.4E-47 333.0 37.4 272 103-406 130-413 (435)
53 2pbi_B Guanine nucleotide-bind 100.0 2.6E-42 9.1E-47 321.1 38.6 252 139-406 55-314 (354)
54 3frx_A Guanine nucleotide-bind 100.0 3.8E-42 1.3E-46 315.4 38.6 251 140-405 9-265 (319)
55 3dw8_B Serine/threonine-protei 100.0 4.3E-43 1.5E-47 336.0 32.7 280 104-405 26-444 (447)
56 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-41 7.2E-46 324.7 44.4 279 98-406 151-441 (445)
57 3vl1_A 26S proteasome regulato 100.0 1.2E-42 4.2E-47 330.2 35.1 280 107-405 98-417 (420)
58 2hes_X YDR267CP; beta-propelle 100.0 2.7E-42 9.3E-47 317.9 35.9 243 104-365 56-328 (330)
59 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.4E-42 8.1E-47 320.3 35.4 249 139-405 6-281 (345)
60 4g56_B MGC81050 protein; prote 100.0 9.8E-43 3.4E-47 324.3 32.9 248 101-367 89-345 (357)
61 1gxr_A ESG1, transducin-like e 100.0 2.3E-42 7.9E-47 317.8 34.4 282 104-406 7-295 (337)
62 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.8E-41 9.7E-46 323.8 43.1 276 100-406 112-390 (445)
63 3iz6_a 40S ribosomal protein R 100.0 1.1E-43 3.9E-48 333.6 25.3 257 132-405 50-327 (380)
64 4a11_B DNA excision repair pro 100.0 1E-41 3.6E-46 321.8 38.1 289 99-406 36-364 (408)
65 3bg1_A Protein SEC13 homolog; 100.0 3.8E-43 1.3E-47 321.6 26.3 263 142-405 7-291 (316)
66 1yfq_A Cell cycle arrest prote 100.0 2.8E-42 9.5E-47 318.5 31.9 273 102-399 7-315 (342)
67 3bg1_A Protein SEC13 homolog; 100.0 3.3E-43 1.1E-47 322.1 25.3 250 101-364 8-292 (316)
68 1erj_A Transcriptional repress 100.0 2.3E-41 7.9E-46 319.3 38.7 240 107-365 124-389 (393)
69 4ery_A WD repeat-containing pr 100.0 2.3E-41 7.7E-46 309.0 37.2 250 139-406 14-267 (312)
70 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-41 5.7E-46 350.8 39.2 301 102-406 54-604 (902)
71 2xzm_R RACK1; ribosome, transl 100.0 8.5E-41 2.9E-45 309.6 39.6 254 140-405 13-283 (343)
72 1pgu_A Actin interacting prote 100.0 7.2E-41 2.5E-45 333.1 41.7 286 99-406 196-613 (615)
73 3v7d_B Cell division control p 100.0 1.7E-40 6E-45 319.8 42.5 279 99-403 155-459 (464)
74 3f3f_A Nucleoporin SEH1; struc 100.0 7.1E-42 2.4E-46 315.3 31.4 292 101-406 6-336 (351)
75 3mmy_A MRNA export factor; mRN 100.0 1.8E-41 6.1E-46 315.5 32.9 289 98-404 31-343 (368)
76 2oaj_A Protein SNI1; WD40 repe 100.0 8.7E-41 3E-45 345.5 38.8 183 100-286 11-223 (902)
77 1pgu_A Actin interacting prote 100.0 1.3E-40 4.4E-45 331.4 38.7 281 104-406 16-327 (615)
78 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-39 5.8E-44 348.7 42.5 306 99-406 650-1073(1249)
79 3jrp_A Fusion protein of prote 100.0 1E-39 3.4E-44 305.1 34.0 251 100-365 5-287 (379)
80 3jrp_A Fusion protein of prote 100.0 6.9E-40 2.4E-44 306.3 32.8 262 139-405 2-285 (379)
81 2aq5_A Coronin-1A; WD40 repeat 100.0 2.5E-40 8.5E-45 313.1 26.4 278 108-405 36-340 (402)
82 3mkq_A Coatomer beta'-subunit; 100.0 7.6E-39 2.6E-43 329.2 39.2 288 98-405 47-384 (814)
83 4aow_A Guanine nucleotide-bind 100.0 2.1E-38 7.1E-43 292.1 38.0 252 137-406 27-285 (340)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-38 4.4E-43 305.9 35.2 279 106-405 4-389 (450)
85 3dwl_C Actin-related protein 2 100.0 2.7E-40 9.3E-45 309.7 22.4 241 144-404 7-278 (377)
86 3dm0_A Maltose-binding peripla 100.0 2E-38 6.9E-43 320.7 37.8 248 141-406 375-631 (694)
87 1k8k_C P40, ARP2/3 complex 41 100.0 2.4E-38 8.2E-43 295.4 34.5 243 144-405 4-272 (372)
88 1sq9_A Antiviral protein SKI8; 100.0 7.7E-39 2.6E-43 301.7 30.4 251 98-367 54-397 (397)
89 4gga_A P55CDC, cell division c 100.0 7.5E-38 2.6E-42 297.8 37.2 263 101-384 142-414 (420)
90 3k26_A Polycomb protein EED; W 100.0 4.2E-39 1.4E-43 299.5 27.7 242 105-364 68-365 (366)
91 2xyi_A Probable histone-bindin 100.0 2.7E-38 9.4E-43 301.8 33.6 248 142-406 122-409 (430)
92 3gre_A Serine/threonine-protei 100.0 1.7E-39 5.9E-44 310.5 25.2 267 113-406 34-358 (437)
93 4aez_A CDC20, WD repeat-contai 100.0 1E-37 3.5E-42 295.1 36.0 248 104-372 132-387 (401)
94 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-37 3.9E-42 289.9 34.0 275 101-405 14-334 (355)
95 3ei3_B DNA damage-binding prot 100.0 6.2E-38 2.1E-42 294.5 31.7 251 133-406 58-338 (383)
96 3zwl_B Eukaryotic translation 100.0 8.8E-37 3E-41 283.9 39.1 245 141-405 25-302 (369)
97 3i2n_A WD repeat-containing pr 100.0 5.2E-38 1.8E-42 291.2 30.2 247 102-367 61-355 (357)
98 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-38 3.9E-43 309.9 26.2 246 101-365 202-517 (524)
99 3dw8_B Serine/threonine-protei 100.0 7.2E-38 2.5E-42 299.7 29.6 241 147-406 27-372 (447)
100 3lrv_A PRE-mRNA-splicing facto 100.0 3E-38 1E-42 292.4 26.0 263 114-404 44-330 (343)
101 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-36 3.7E-41 277.1 35.5 242 139-406 9-254 (313)
102 3jro_A Fusion protein of prote 100.0 7.2E-38 2.5E-42 319.0 29.8 260 142-406 3-284 (753)
103 3jro_A Fusion protein of prote 100.0 2.9E-38 1E-42 321.9 26.8 250 101-365 4-285 (753)
104 2xyi_A Probable histone-bindin 100.0 3.1E-37 1.1E-41 294.5 32.2 250 100-366 122-411 (430)
105 2j04_A TAU60, YPL007P, hypothe 100.0 1.4E-38 4.9E-43 303.1 22.6 260 105-405 14-295 (588)
106 4h5i_A Guanine nucleotide-exch 100.0 1.9E-37 6.6E-42 289.4 28.1 244 100-365 67-343 (365)
107 4a11_B DNA excision repair pro 100.0 1E-36 3.5E-41 287.6 31.3 281 104-405 97-403 (408)
108 3bws_A Protein LP49; two-domai 100.0 8.8E-36 3E-40 284.2 37.1 278 107-406 123-431 (433)
109 1yfq_A Cell cycle arrest prote 100.0 1.5E-36 5.1E-41 280.1 30.5 242 142-406 5-281 (342)
110 4e54_B DNA damage-binding prot 100.0 2.4E-37 8.1E-42 295.8 25.0 261 101-369 159-434 (435)
111 1p22_A F-BOX/WD-repeat protein 100.0 2.8E-36 9.7E-41 288.3 31.6 257 98-385 165-433 (435)
112 4gq1_A NUP37; propeller, trans 100.0 9.2E-37 3.2E-41 287.8 26.5 231 156-404 97-386 (393)
113 4ggc_A P55CDC, cell division c 100.0 5.3E-35 1.8E-39 266.7 36.8 245 101-366 62-316 (318)
114 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-36 4.2E-41 289.8 25.7 256 102-395 48-349 (588)
115 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-36 7.2E-41 286.1 26.4 247 101-367 76-344 (402)
116 4gq1_A NUP37; propeller, trans 100.0 1.3E-36 4.4E-41 286.8 23.4 259 104-363 87-387 (393)
117 1l0q_A Surface layer protein; 100.0 4.9E-34 1.7E-38 268.5 40.5 264 119-406 3-274 (391)
118 3mmy_A MRNA export factor; mRN 100.0 3.2E-34 1.1E-38 266.5 34.8 252 133-406 24-303 (368)
119 3vu4_A KMHSV2; beta-propeller 100.0 8.5E-35 2.9E-39 270.5 30.6 245 132-406 3-270 (355)
120 2w18_A PALB2, fancn, partner a 100.0 6.9E-35 2.3E-39 261.7 27.6 286 109-406 42-356 (356)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2E-34 6.7E-39 276.8 31.3 240 149-405 5-337 (450)
122 3f3f_A Nucleoporin SEH1; struc 100.0 3.1E-34 1.1E-38 264.1 26.4 260 99-372 50-344 (351)
123 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-34 6.4E-39 266.9 24.0 226 156-405 44-290 (343)
124 1l0q_A Surface layer protein; 100.0 6.2E-32 2.1E-36 254.1 40.8 281 101-405 27-340 (391)
125 2w18_A PALB2, fancn, partner a 100.0 2.5E-33 8.5E-38 251.6 24.3 235 98-363 78-355 (356)
126 3bws_A Protein LP49; two-domai 100.0 9.8E-31 3.4E-35 249.3 35.3 279 105-405 59-388 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-30 4E-35 247.7 27.5 276 106-405 62-385 (415)
128 1nir_A Nitrite reductase; hemo 100.0 2.2E-29 7.6E-34 246.3 36.9 278 109-406 181-513 (543)
129 1nir_A Nitrite reductase; hemo 100.0 1.8E-29 6.3E-34 246.8 32.9 272 113-406 144-457 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 2.1E-29 7.3E-34 238.9 30.6 264 101-389 112-410 (415)
131 2ecf_A Dipeptidyl peptidase IV 100.0 4.8E-29 1.7E-33 253.8 30.3 278 106-405 36-411 (741)
132 3u4y_A Uncharacterized protein 100.0 3.1E-27 1E-31 216.9 32.2 273 113-406 4-303 (331)
133 3vgz_A Uncharacterized protein 100.0 2.1E-26 7.3E-31 212.9 37.6 271 105-397 39-334 (353)
134 1xfd_A DIP, dipeptidyl aminope 100.0 3E-28 1E-32 247.3 24.1 277 108-405 18-391 (723)
135 2ojh_A Uncharacterized protein 100.0 7.5E-28 2.5E-32 216.3 24.0 254 123-398 17-293 (297)
136 1ri6_A Putative isomerase YBHE 100.0 1E-26 3.5E-31 213.9 31.3 265 120-405 7-306 (343)
137 1pby_B Quinohemoprotein amine 100.0 2.1E-26 7.2E-31 211.3 29.2 274 119-406 2-309 (337)
138 2z3z_A Dipeptidyl aminopeptida 100.0 3E-26 1E-30 232.0 31.3 278 106-405 81-433 (706)
139 1k32_A Tricorn protease; prote 100.0 2.5E-26 8.6E-31 242.2 28.9 279 100-405 197-500 (1045)
140 2ecf_A Dipeptidyl peptidase IV 100.0 3.2E-26 1.1E-30 233.1 27.7 275 108-405 110-457 (741)
141 3o4h_A Acylamino-acid-releasin 99.9 5.8E-26 2E-30 224.9 28.0 267 107-405 22-313 (582)
142 1k32_A Tricorn protease; prote 99.9 2.8E-25 9.7E-30 234.1 30.5 273 105-405 294-635 (1045)
143 1ri6_A Putative isomerase YBHE 99.9 1.7E-24 5.7E-29 199.1 31.7 265 103-389 34-335 (343)
144 2ojh_A Uncharacterized protein 99.9 1.8E-25 6.2E-30 200.7 24.2 237 99-356 34-293 (297)
145 3hfq_A Uncharacterized protein 99.9 1.7E-23 5.8E-28 193.4 35.3 261 126-405 14-315 (347)
146 1jmx_B Amine dehydrogenase; ox 99.9 4.2E-24 1.4E-28 197.0 29.2 272 111-406 4-324 (349)
147 2z3z_A Dipeptidyl aminopeptida 99.9 8.8E-25 3E-29 221.3 26.7 271 109-405 28-389 (706)
148 1xfd_A DIP, dipeptidyl aminope 99.9 6.8E-25 2.3E-29 222.6 25.7 275 100-394 51-427 (723)
149 3u4y_A Uncharacterized protein 99.9 4.6E-23 1.6E-27 189.0 34.0 245 102-367 36-306 (331)
150 1z68_A Fibroblast activation p 99.9 1.3E-24 4.3E-29 220.6 22.3 272 111-405 20-389 (719)
151 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-23 4.7E-28 199.8 27.7 199 106-324 36-279 (434)
152 3vgz_A Uncharacterized protein 99.9 7.6E-23 2.6E-27 189.0 31.0 237 148-405 40-301 (353)
153 3scy_A Hypothetical bacterial 99.9 1.6E-22 5.4E-27 188.0 33.0 259 126-405 25-335 (361)
154 1pby_B Quinohemoprotein amine 99.9 4.3E-23 1.5E-27 189.1 28.5 244 108-376 35-321 (337)
155 3hfq_A Uncharacterized protein 99.9 1.6E-22 5.3E-27 186.9 32.3 247 103-368 36-322 (347)
156 3pe7_A Oligogalacturonate lyas 99.9 4.4E-23 1.5E-27 193.3 26.8 286 99-405 23-380 (388)
157 2oit_A Nucleoporin 214KDA; NH2 99.9 5.4E-23 1.8E-27 195.7 21.8 212 128-366 23-279 (434)
158 3scy_A Hypothetical bacterial 99.9 2.7E-21 9.1E-26 179.6 32.3 260 105-385 48-360 (361)
159 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.7E-21 5.7E-26 181.5 29.6 266 121-405 5-339 (365)
160 3o4h_A Acylamino-acid-releasin 99.9 5.6E-23 1.9E-27 203.4 18.8 230 148-405 21-274 (582)
161 4a5s_A Dipeptidyl peptidase 4 99.9 3.4E-22 1.2E-26 203.2 22.6 265 108-396 18-383 (740)
162 1z68_A Fibroblast activation p 99.9 1.7E-22 5.7E-27 205.0 19.6 274 108-405 61-441 (719)
163 3azo_A Aminopeptidase; POP fam 99.9 3.3E-21 1.1E-25 193.5 26.2 282 101-404 18-364 (662)
164 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.1E-20 3.9E-25 175.8 27.5 243 105-366 38-342 (365)
165 3c5m_A Oligogalacturonate lyas 99.9 3.1E-21 1.1E-25 181.0 23.1 272 109-404 38-379 (396)
166 3fvz_A Peptidyl-glycine alpha- 99.9 2.4E-19 8.3E-24 164.4 32.8 247 106-365 23-322 (329)
167 1q7f_A NHL, brain tumor CG1071 99.9 7.9E-19 2.7E-23 157.4 33.3 241 104-368 27-283 (286)
168 2oiz_A Aromatic amine dehydrog 99.9 2.1E-19 7.1E-24 166.9 30.3 257 126-389 29-360 (361)
169 1q7f_A NHL, brain tumor CG1071 99.9 1.1E-18 3.6E-23 156.6 32.5 236 146-405 27-278 (286)
170 1jmx_B Amine dehydrogenase; ox 99.9 1.9E-19 6.7E-24 165.6 28.1 234 108-375 44-335 (349)
171 2gop_A Trilobed protease; beta 99.9 3.7E-19 1.3E-23 164.1 29.9 256 108-405 16-329 (347)
172 3fvz_A Peptidyl-glycine alpha- 99.9 2.8E-19 9.5E-24 164.0 28.7 239 148-405 23-320 (329)
173 1uuj_A Platelet-activating fac 99.9 4.2E-22 1.4E-26 137.0 6.9 80 1-80 3-84 (88)
174 2dg1_A DRP35, lactonase; beta 99.9 4.8E-19 1.6E-23 162.4 27.6 267 107-397 6-300 (333)
175 3pe7_A Oligogalacturonate lyas 99.8 4.5E-19 1.5E-23 166.0 25.8 255 131-405 13-327 (388)
176 4a5s_A Dipeptidyl peptidase 4 99.8 9.8E-20 3.4E-24 185.2 21.2 234 149-405 17-351 (740)
177 3azo_A Aminopeptidase; POP fam 99.8 4.5E-19 1.5E-23 178.0 24.4 254 101-368 62-372 (662)
178 2z2n_A Virginiamycin B lyase; 99.8 4.3E-16 1.5E-20 140.0 40.1 276 101-404 9-292 (299)
179 2xdw_A Prolyl endopeptidase; a 99.8 8.4E-18 2.9E-22 170.2 31.0 244 104-367 122-416 (710)
180 2xdw_A Prolyl endopeptidase; a 99.8 1.4E-17 4.8E-22 168.6 31.4 239 147-405 123-412 (710)
181 3c5m_A Oligogalacturonate lyas 99.8 1.3E-18 4.5E-23 163.0 20.0 252 132-405 14-327 (396)
182 3e5z_A Putative gluconolactona 99.8 6.6E-17 2.2E-21 145.7 30.0 241 100-367 21-288 (296)
183 3e5z_A Putative gluconolactona 99.8 2.1E-17 7.2E-22 149.0 26.6 234 142-401 21-281 (296)
184 1rwi_B Serine/threonine-protei 99.8 3.5E-17 1.2E-21 145.2 25.7 242 108-368 25-267 (270)
185 2gop_A Trilobed protease; beta 99.8 5.5E-17 1.9E-21 149.4 27.9 233 107-376 59-340 (347)
186 2bkl_A Prolyl endopeptidase; m 99.8 3.2E-18 1.1E-22 172.8 20.8 241 104-367 118-399 (695)
187 2qc5_A Streptogramin B lactona 99.8 2.2E-15 7.6E-20 135.3 37.3 280 100-405 13-298 (300)
188 2bkl_A Prolyl endopeptidase; m 99.8 6.4E-18 2.2E-22 170.6 22.8 267 116-405 77-395 (695)
189 3dsm_A Uncharacterized protein 99.8 1.5E-16 5.1E-21 145.7 29.6 256 126-405 15-300 (328)
190 2dg1_A DRP35, lactonase; beta 99.8 1E-15 3.5E-20 140.1 33.9 235 100-355 38-300 (333)
191 1rwi_B Serine/threonine-protei 99.8 9.5E-17 3.2E-21 142.4 25.4 237 150-405 25-262 (270)
192 2oiz_A Aromatic amine dehydrog 99.8 1.5E-16 5.2E-21 147.6 27.1 243 159-406 14-333 (361)
193 3no2_A Uncharacterized protein 99.8 3.3E-16 1.1E-20 139.5 28.2 213 117-353 4-231 (276)
194 1qks_A Cytochrome CD1 nitrite 99.8 8.4E-15 2.9E-19 143.0 37.4 280 107-405 197-536 (567)
195 3no2_A Uncharacterized protein 99.8 1.2E-15 4.1E-20 135.9 27.8 219 159-395 4-231 (276)
196 1qks_A Cytochrome CD1 nitrite 99.8 6.1E-15 2.1E-19 144.0 35.1 269 116-405 165-475 (567)
197 1yr2_A Prolyl oligopeptidase; 99.7 6.7E-16 2.3E-20 157.0 27.1 268 116-405 116-439 (741)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.4E-14 4.6E-19 131.3 30.1 237 147-405 16-297 (314)
199 2mad_H Methylamine dehydrogena 99.7 1E-13 3.6E-18 128.8 36.5 265 115-406 29-349 (373)
200 3dsm_A Uncharacterized protein 99.7 9.5E-15 3.3E-19 133.6 29.1 249 109-384 46-319 (328)
201 1yr2_A Prolyl oligopeptidase; 99.7 1.5E-15 5E-20 154.5 24.7 242 104-367 160-443 (741)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.3E-14 8E-19 129.7 29.9 242 102-365 13-299 (314)
203 2z2n_A Virginiamycin B lyase; 99.7 1.3E-13 4.3E-18 123.7 34.0 239 145-405 11-253 (299)
204 3sjl_D Methylamine dehydrogena 99.7 3.5E-14 1.2E-18 130.6 25.9 273 113-405 39-361 (386)
205 3hrp_A Uncharacterized protein 99.7 2E-13 7E-18 128.5 31.6 234 150-405 132-408 (409)
206 3hrp_A Uncharacterized protein 99.7 1.5E-13 5.1E-18 129.4 29.4 234 107-363 131-408 (409)
207 3g4e_A Regucalcin; six bladed 99.6 1.5E-12 5.1E-17 117.2 32.1 226 147-394 11-259 (297)
208 2qc5_A Streptogramin B lactona 99.6 5.7E-12 2E-16 112.9 34.1 236 147-405 18-258 (300)
209 3g4e_A Regucalcin; six bladed 99.6 1.4E-12 4.6E-17 117.5 29.6 225 108-354 14-261 (297)
210 3c75_H MADH, methylamine dehyd 99.6 1.9E-13 6.4E-18 128.0 24.3 259 128-406 99-401 (426)
211 2mad_H Methylamine dehydrogena 99.6 7.1E-12 2.4E-16 116.4 34.1 247 111-372 70-357 (373)
212 1xip_A Nucleoporin NUP159; bet 99.6 2.9E-14 1E-18 131.7 17.8 165 108-285 39-224 (388)
213 1xip_A Nucleoporin NUP159; bet 99.6 4.7E-14 1.6E-18 130.3 19.1 171 192-393 39-230 (388)
214 3sjl_D Methylamine dehydrogena 99.6 4.5E-13 1.5E-17 123.3 24.8 253 111-387 82-384 (386)
215 2qe8_A Uncharacterized protein 99.6 4.5E-14 1.5E-18 130.0 17.7 260 107-399 17-313 (343)
216 3iuj_A Prolyl endopeptidase; h 99.6 2.2E-13 7.5E-18 137.3 23.4 240 104-367 126-407 (693)
217 2ghs_A AGR_C_1268P; regucalcin 99.6 2.4E-11 8.2E-16 110.8 32.5 219 151-395 51-290 (326)
218 3iuj_A Prolyl endopeptidase; h 99.5 6E-13 2E-17 134.1 23.1 237 146-405 126-403 (693)
219 2ghs_A AGR_C_1268P; regucalcin 99.5 2.4E-11 8.2E-16 110.8 31.1 220 109-354 51-291 (326)
220 3dr2_A Exported gluconolactona 99.5 1.1E-11 3.7E-16 112.0 27.4 229 102-359 40-301 (305)
221 2hz6_A Endoplasmic reticulum t 99.5 4.2E-16 1.4E-20 145.0 -3.2 225 117-367 8-238 (369)
222 3dr2_A Exported gluconolactona 99.5 1.6E-11 5.4E-16 110.9 25.3 232 144-402 40-302 (305)
223 3c75_H MADH, methylamine dehyd 99.5 1.7E-11 5.7E-16 114.8 23.6 239 111-372 122-409 (426)
224 1yiq_A Quinohemoprotein alcoho 99.4 3E-11 1E-15 121.2 26.3 273 118-395 121-537 (689)
225 1mda_H Methylamine dehydrogena 99.4 8.3E-12 2.9E-16 114.9 20.1 245 129-406 47-345 (368)
226 1yiq_A Quinohemoprotein alcoho 99.4 2.9E-11 9.9E-16 121.3 25.7 277 118-406 70-504 (689)
227 1kb0_A Quinohemoprotein alcoho 99.4 4.9E-11 1.7E-15 119.4 26.1 275 118-406 77-506 (677)
228 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.1E-10 1.1E-14 105.5 29.6 258 117-404 102-375 (376)
229 1kb0_A Quinohemoprotein alcoho 99.4 7.1E-11 2.4E-15 118.2 25.5 270 118-393 128-537 (677)
230 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.4E-09 4.8E-14 101.0 32.5 263 118-405 53-335 (376)
231 2qe8_A Uncharacterized protein 99.4 4E-11 1.4E-15 110.2 19.5 227 104-362 64-318 (343)
232 2hz6_A Endoplasmic reticulum t 99.4 2E-13 6.8E-18 126.9 4.0 204 159-389 8-216 (369)
233 1mda_H Methylamine dehydrogena 99.4 4.5E-11 1.5E-15 110.1 18.8 244 111-386 69-366 (368)
234 3hxj_A Pyrrolo-quinoline quino 99.3 5.1E-11 1.7E-15 108.4 18.3 261 108-404 61-321 (330)
235 3hxj_A Pyrrolo-quinoline quino 99.3 5.1E-11 1.8E-15 108.4 14.4 255 114-404 27-281 (330)
236 1npe_A Nidogen, entactin; glyc 99.3 2.6E-08 9E-13 87.7 30.6 250 120-389 3-263 (267)
237 1fwx_A Nitrous oxide reductase 99.2 2.2E-09 7.4E-14 103.0 21.0 255 120-395 17-406 (595)
238 2ece_A 462AA long hypothetical 99.2 1.8E-08 6E-13 93.5 26.2 229 116-353 93-399 (462)
239 2ece_A 462AA long hypothetical 99.2 1.2E-07 4.1E-12 88.0 31.1 219 158-395 93-399 (462)
240 1kv9_A Type II quinohemoprotei 99.2 7.6E-09 2.6E-13 103.4 24.8 275 118-406 66-487 (668)
241 1kv9_A Type II quinohemoprotei 99.1 9.6E-09 3.3E-13 102.7 22.8 275 118-395 117-520 (668)
242 4a2l_A BT_4663, two-component 99.1 1.6E-06 5.5E-11 88.6 38.0 269 109-405 175-478 (795)
243 1npe_A Nidogen, entactin; glyc 99.1 3E-07 1E-11 80.8 28.3 219 108-347 37-263 (267)
244 4a2l_A BT_4663, two-component 99.1 3E-06 1E-10 86.6 38.8 271 106-404 214-523 (795)
245 2fp8_A Strictosidine synthase; 99.0 4E-07 1.4E-11 82.5 28.9 241 101-365 13-313 (322)
246 1fwx_A Nitrous oxide reductase 99.0 2.1E-08 7.3E-13 96.2 20.8 231 116-367 99-433 (595)
247 2iwa_A Glutamine cyclotransfer 99.0 9.3E-08 3.2E-12 83.3 23.0 193 109-323 23-237 (266)
248 2iwa_A Glutamine cyclotransfer 99.0 1.6E-07 5.5E-12 81.8 23.9 201 181-405 10-235 (266)
249 1w6s_A Methanol dehydrogenase 99.0 4.4E-07 1.5E-11 89.0 27.7 277 118-406 62-502 (599)
250 2ad6_A Methanol dehydrogenase 99.0 6.2E-07 2.1E-11 87.8 28.3 274 118-406 62-493 (571)
251 2fp8_A Strictosidine synthase; 99.0 1.1E-06 3.6E-11 79.7 27.6 232 149-405 19-311 (322)
252 3nol_A Glutamine cyclotransfer 98.9 4.5E-07 1.5E-11 78.1 23.3 180 151-354 45-244 (262)
253 3v64_C Agrin; beta propeller, 98.9 3.1E-06 1.1E-10 77.5 30.2 247 106-373 33-283 (349)
254 2ad6_A Methanol dehydrogenase 98.9 3.4E-07 1.2E-11 89.6 24.8 267 118-391 115-521 (571)
255 2p4o_A Hypothetical protein; p 98.9 3.3E-06 1.1E-10 75.8 28.7 223 149-395 32-276 (306)
256 1k3i_A Galactose oxidase precu 98.9 8.8E-08 3E-12 95.7 19.7 269 111-396 190-530 (656)
257 1flg_A Protein (quinoprotein e 98.9 4.9E-06 1.7E-10 81.6 31.3 277 118-406 68-515 (582)
258 1flg_A Protein (quinoprotein e 98.9 1.5E-06 5E-11 85.3 27.3 275 118-394 117-547 (582)
259 3nol_A Glutamine cyclotransfer 98.9 1.7E-06 5.7E-11 74.6 24.2 190 181-396 32-244 (262)
260 3v65_B Low-density lipoprotein 98.9 3.7E-06 1.2E-10 78.2 28.7 255 109-384 79-337 (386)
261 1w6s_A Methanol dehydrogenase 98.9 7.5E-07 2.6E-11 87.3 24.6 270 121-394 124-534 (599)
262 3mbr_X Glutamine cyclotransfer 98.9 3E-06 1E-10 72.4 25.0 180 150-354 22-223 (243)
263 3v9f_A Two-component system se 98.8 2.5E-05 8.4E-10 79.7 35.3 273 106-405 257-566 (781)
264 3v9f_A Two-component system se 98.8 3E-05 1E-09 79.0 35.3 271 107-404 211-521 (781)
265 3nok_A Glutaminyl cyclase; bet 98.8 9.7E-07 3.3E-11 76.1 20.1 169 109-285 57-245 (268)
266 3mbr_X Glutamine cyclotransfer 98.8 8E-06 2.7E-10 69.7 24.9 190 181-395 10-222 (243)
267 2p4o_A Hypothetical protein; p 98.8 9.8E-06 3.4E-10 72.7 27.0 226 107-356 32-279 (306)
268 3nok_A Glutaminyl cyclase; bet 98.8 4.5E-06 1.5E-10 71.9 23.0 188 182-394 45-253 (268)
269 1ijq_A LDL receptor, low-densi 98.7 0.00012 4.1E-09 65.9 32.9 226 128-372 10-245 (316)
270 2xbg_A YCF48-like protein; pho 98.7 8.4E-05 2.9E-09 67.3 31.8 267 106-404 35-319 (327)
271 3tc9_A Hypothetical hydrolase; 98.7 1.1E-05 3.7E-10 76.1 26.6 153 108-262 138-300 (430)
272 2xe4_A Oligopeptidase B; hydro 98.7 1.1E-06 3.8E-11 89.0 20.6 238 108-367 175-460 (751)
273 3v64_C Agrin; beta propeller, 98.7 5.7E-05 1.9E-09 69.1 30.2 235 149-404 34-272 (349)
274 3p5b_L Low density lipoprotein 98.6 0.00026 8.9E-09 65.9 33.4 238 127-383 91-338 (400)
275 3qqz_A Putative uncharacterize 98.6 5.8E-05 2E-09 65.2 26.4 201 143-363 21-251 (255)
276 4hw6_A Hypothetical protein, I 98.6 3.6E-05 1.2E-09 72.5 27.1 244 108-364 140-432 (433)
277 3v65_B Low-density lipoprotein 98.6 0.00013 4.3E-09 67.8 28.6 233 151-404 79-315 (386)
278 3tc9_A Hypothetical hydrolase; 98.6 6.2E-05 2.1E-09 70.9 26.7 234 150-405 138-428 (430)
279 1k3i_A Galactose oxidase precu 98.5 1.9E-05 6.4E-10 78.8 22.7 239 153-405 190-495 (656)
280 3sov_A LRP-6, low-density lipo 98.5 0.00018 6.3E-09 64.7 26.9 228 127-373 12-246 (318)
281 3kya_A Putative phosphatase; s 98.5 0.0002 6.9E-09 67.9 27.9 254 108-370 140-480 (496)
282 3qqz_A Putative uncharacterize 98.5 0.00035 1.2E-08 60.4 27.1 182 101-284 21-233 (255)
283 4hw6_A Hypothetical protein, I 98.5 0.00019 6.4E-09 67.6 27.5 234 150-405 140-431 (433)
284 3p5b_L Low density lipoprotein 98.5 0.00082 2.8E-08 62.5 31.3 216 106-340 111-337 (400)
285 1ijq_A LDL receptor, low-densi 98.4 0.00082 2.8E-08 60.4 31.9 220 163-404 4-235 (316)
286 2xe4_A Oligopeptidase B; hydro 98.4 1.3E-05 4.5E-10 81.2 19.5 190 192-403 175-394 (751)
287 3sov_A LRP-6, low-density lipo 98.4 0.00031 1.1E-08 63.2 25.5 204 108-330 36-245 (318)
288 3m0c_C LDL receptor, low-densi 98.3 0.0012 4E-08 66.9 30.9 228 127-373 403-640 (791)
289 3s94_A LRP-6, low-density lipo 98.3 0.0038 1.3E-07 61.5 32.6 297 107-405 84-421 (619)
290 3m0c_C LDL receptor, low-densi 98.2 0.002 6.8E-08 65.1 29.3 163 106-268 423-594 (791)
291 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0057 1.9E-07 60.3 31.0 227 126-372 13-244 (628)
292 3amr_A 3-phytase; beta-propell 98.1 0.00087 3E-08 60.2 22.2 193 117-330 39-271 (355)
293 3amr_A 3-phytase; beta-propell 98.1 0.0021 7.1E-08 57.8 24.2 190 160-372 40-271 (355)
294 1n7d_A LDL receptor, low-densi 98.1 1.1E-05 3.6E-10 81.0 10.3 228 127-373 385-622 (699)
295 3kya_A Putative phosphatase; s 98.1 0.0056 1.9E-07 58.0 27.8 234 151-405 141-473 (496)
296 2ism_A Putative oxidoreductase 98.1 0.0062 2.1E-07 55.5 27.6 98 108-208 32-152 (352)
297 2xbg_A YCF48-like protein; pho 98.0 0.0071 2.4E-07 54.4 27.2 228 106-363 79-320 (327)
298 3s94_A LRP-6, low-density lipo 98.0 0.0032 1.1E-07 62.0 26.1 228 127-372 17-250 (619)
299 2ism_A Putative oxidoreductase 98.0 0.0095 3.2E-07 54.2 29.3 100 149-251 31-153 (352)
300 2p9w_A MAL S 1 allergenic prot 98.0 0.00094 3.2E-08 59.5 19.2 164 99-263 5-215 (334)
301 1n7d_A LDL receptor, low-densi 97.9 4E-05 1.4E-09 76.8 11.0 216 108-342 407-633 (699)
302 2p9w_A MAL S 1 allergenic prot 97.9 0.0085 2.9E-07 53.4 24.4 196 190-403 12-261 (334)
303 4a0p_A LRP6, LRP-6, low-densit 97.8 0.017 5.9E-07 56.9 27.5 159 107-266 37-200 (628)
304 2vpj_A Kelch-like protein 12; 97.6 0.0045 1.5E-07 54.8 18.3 213 128-366 31-279 (301)
305 3a9g_A Putative uncharacterize 97.6 0.04 1.4E-06 50.1 27.4 227 149-395 29-330 (354)
306 3a9g_A Putative uncharacterize 97.5 0.049 1.7E-06 49.5 29.7 232 107-353 29-330 (354)
307 2xtc_A F-box-like/WD repeat-co 97.5 0.0003 1E-08 48.9 6.5 33 8-40 5-37 (90)
308 2xn4_A Kelch-like protein 2; s 97.4 0.015 5.2E-07 51.4 19.2 212 128-367 30-278 (302)
309 2g8s_A Glucose/sorbosone dehyd 97.4 0.067 2.3E-06 48.5 26.4 237 107-358 18-347 (353)
310 3ii7_A Kelch-like protein 7; p 97.4 0.024 8.4E-07 50.1 19.6 219 120-367 14-274 (306)
311 1cru_A Protein (soluble quinop 97.3 0.11 3.8E-06 48.9 31.7 103 107-209 27-162 (454)
312 2vpj_A Kelch-like protein 12; 97.3 0.013 4.3E-07 51.9 16.7 220 160-405 15-276 (301)
313 3pbp_A Nucleoporin NUP82; beta 97.2 0.05 1.7E-06 50.0 19.0 144 201-361 31-208 (452)
314 2g8s_A Glucose/sorbosone dehyd 97.1 0.16 5.5E-06 46.0 25.2 66 335-400 271-347 (353)
315 2xn4_A Kelch-like protein 2; s 97.0 0.055 1.9E-06 47.7 18.2 219 161-405 17-274 (302)
316 1tl2_A L10, protein (tachylect 97.0 0.02 6.8E-07 47.7 13.6 142 107-256 41-203 (236)
317 1zgk_A Kelch-like ECH-associat 97.0 0.055 1.9E-06 47.9 17.8 143 117-264 24-194 (308)
318 4asc_A Kelch repeat and BTB do 97.0 0.14 4.8E-06 45.4 20.4 139 120-264 7-175 (315)
319 3ii7_A Kelch-like protein 7; p 97.0 0.097 3.3E-06 46.2 19.3 217 161-405 13-270 (306)
320 3das_A Putative oxidoreductase 96.9 0.22 7.5E-06 44.9 30.6 144 105-250 30-219 (347)
321 3sre_A PON1, serum paraoxonase 96.9 0.21 7.1E-06 45.2 20.6 62 335-397 221-287 (355)
322 2be1_A Serine/threonine-protei 96.6 0.35 1.2E-05 43.3 20.8 197 119-328 11-236 (339)
323 2xzh_A Clathrin heavy chain 1; 96.6 0.33 1.1E-05 43.0 29.5 244 112-367 72-334 (365)
324 3pbp_A Nucleoporin NUP82; beta 96.6 0.32 1.1E-05 44.8 19.6 141 117-260 31-209 (452)
325 2woz_A Kelch repeat and BTB do 96.5 0.38 1.3E-05 42.6 19.8 133 129-264 25-185 (318)
326 3ei3_A DNA damage-binding prot 96.5 1.1 3.7E-05 47.4 35.8 288 106-405 553-911 (1158)
327 3ei3_A DNA damage-binding prot 96.4 1.2 4.1E-05 47.1 36.6 149 108-260 515-679 (1158)
328 2xzh_A Clathrin heavy chain 1; 96.4 0.46 1.6E-05 42.1 32.3 252 126-400 47-325 (365)
329 1bpo_A Protein (clathrin); cla 96.3 0.71 2.4E-05 42.6 33.5 253 126-401 46-325 (494)
330 1zgk_A Kelch-like ECH-associat 96.2 0.22 7.5E-06 44.0 16.4 219 159-405 24-285 (308)
331 3sre_A PON1, serum paraoxonase 96.2 0.68 2.3E-05 41.8 22.1 192 150-363 51-296 (355)
332 3das_A Putative oxidoreductase 96.2 0.69 2.3E-05 41.6 29.6 104 148-251 31-158 (347)
333 3sbq_A Nitrous-oxide reductase 96.1 0.66 2.2E-05 44.2 19.0 262 120-405 72-406 (638)
334 2uvk_A YJHT; unknown function, 96.1 0.17 5.7E-06 45.8 15.0 91 117-211 19-128 (357)
335 1bpo_A Protein (clathrin); cla 95.9 1 3.5E-05 41.6 30.0 244 112-367 71-333 (494)
336 4asc_A Kelch repeat and BTB do 95.9 0.86 2.9E-05 40.1 20.2 208 162-397 7-253 (315)
337 1xi4_A Clathrin heavy chain; a 95.7 0.75 2.6E-05 49.0 19.3 224 126-372 46-296 (1630)
338 3qhy_B Beta-lactamase inhibito 95.7 0.86 2.9E-05 39.7 17.5 243 108-392 25-269 (282)
339 2woz_A Kelch repeat and BTB do 95.5 1.1 3.9E-05 39.4 18.0 144 115-264 54-232 (318)
340 1cru_A Protein (soluble quinop 95.5 1.7 5.8E-05 40.7 22.0 109 232-354 26-163 (454)
341 1tl2_A L10, protein (tachylect 95.4 1 3.4E-05 37.5 18.7 136 116-259 2-159 (236)
342 3ott_A Two-component system se 95.2 3 0.0001 41.9 34.8 260 107-400 63-346 (758)
343 2zwa_A Leucine carboxyl methyl 95.0 1.5 5.1E-05 43.7 18.6 149 116-265 396-579 (695)
344 2be1_A Serine/threonine-protei 95.0 0.2 6.9E-06 44.9 11.0 150 203-362 11-181 (339)
345 3qhy_B Beta-lactamase inhibito 95.0 1 3.5E-05 39.2 15.4 219 149-404 24-243 (282)
346 1xi4_A Clathrin heavy chain; a 94.7 1.4 4.7E-05 47.0 17.4 218 112-341 71-307 (1630)
347 3ott_A Two-component system se 94.2 5.2 0.00018 40.1 35.8 268 108-404 192-499 (758)
348 2uvk_A YJHT; unknown function, 93.2 2.5 8.4E-05 37.8 14.7 52 117-169 65-128 (357)
349 2zwa_A Leucine carboxyl methyl 91.5 4.1 0.00014 40.5 15.0 147 117-264 451-636 (695)
350 3s25_A Hypothetical 7-bladed b 91.4 6.9 0.00024 34.3 21.3 194 158-393 23-239 (302)
351 3b7f_A Glycosyl hydrolase, BNR 90.7 9.4 0.00032 34.6 22.9 47 338-385 344-391 (394)
352 3sbq_A Nitrous-oxide reductase 87.7 3.8 0.00013 39.1 10.4 100 151-251 325-453 (638)
353 2wg3_C Hedgehog-interacting pr 86.8 20 0.0007 33.4 26.9 103 108-210 15-158 (463)
354 2wg3_C Hedgehog-interacting pr 85.1 25 0.00085 32.8 27.2 106 149-254 14-160 (463)
355 4gq2_M Nucleoporin NUP120; bet 82.2 10 0.00035 39.1 11.8 38 150-187 237-274 (950)
356 4gq2_M Nucleoporin NUP120; bet 80.7 9.1 0.00031 39.6 10.8 37 336-372 237-273 (950)
357 4hvt_A Ritya.17583.B, post-pro 77.1 61 0.0021 32.1 21.2 232 110-364 132-429 (711)
358 3s25_A Hypothetical 7-bladed b 73.2 46 0.0016 28.9 24.3 140 112-265 58-218 (302)
359 4fhn_B Nucleoporin NUP120; pro 72.8 11 0.00038 39.8 9.0 38 150-187 239-276 (1139)
360 3q6k_A 43.2 kDa salivary prote 63.3 86 0.003 28.3 17.6 156 107-263 87-306 (381)
361 3zwu_A Alkaline phosphatase PH 62.6 26 0.00088 33.9 8.4 58 109-166 478-548 (592)
362 4fhn_B Nucleoporin NUP120; pro 62.4 22 0.00074 37.6 8.6 38 192-229 239-276 (1139)
363 3f7f_A Nucleoporin NUP120; nuc 57.4 14 0.00049 36.4 5.7 36 336-373 223-258 (729)
364 3zwu_A Alkaline phosphatase PH 56.9 42 0.0014 32.4 8.8 57 152-208 479-548 (592)
365 3no0_A DNA gyrase subunit A; D 53.9 1E+02 0.0035 26.2 18.1 152 106-261 67-244 (276)
366 4a9v_A PHOX; hydrolase, beta-p 52.8 60 0.002 31.2 8.9 61 107-167 476-549 (592)
367 3lay_A Zinc resistance-associa 52.3 30 0.001 27.4 5.8 19 3-21 68-86 (175)
368 3f7f_A Nucleoporin NUP120; nuc 51.3 27 0.00093 34.5 6.5 36 151-188 224-259 (729)
369 2d68_A FOP, FGFR1OP; alpha hel 50.0 21 0.00073 24.1 3.9 35 5-39 15-49 (82)
370 3uc1_A DNA gyrase subunit A; D 49.8 1.3E+02 0.0046 26.3 17.0 112 107-220 95-227 (327)
371 4a9v_A PHOX; hydrolase, beta-p 49.6 88 0.003 30.0 9.5 60 150-209 477-549 (592)
372 1suu_A DNA gyrase subunit A; t 35.2 2.2E+02 0.0075 24.6 23.8 146 116-263 6-181 (312)
373 3uc1_A DNA gyrase subunit A; D 34.7 2.3E+02 0.0079 24.7 22.5 236 118-364 3-278 (327)
374 4hvt_A Ritya.17583.B, post-pro 34.4 3.5E+02 0.012 26.7 23.5 216 152-389 132-408 (711)
375 3b7f_A Glycosyl hydrolase, BNR 31.1 2.8E+02 0.0095 24.5 24.3 50 336-387 233-288 (394)
376 3eyi_A Z-DNA-binding protein 1 29.4 31 0.001 22.4 2.0 25 3-31 7-31 (72)
377 4gfq_A Ribosome-recycling fact 27.2 1.8E+02 0.0062 23.6 6.7 40 3-42 129-177 (209)
378 2xz2_A CSTF-50, isoform B; RNA 26.2 1.2E+02 0.0042 19.3 4.3 34 5-38 13-46 (66)
379 1suu_A DNA gyrase subunit A; t 24.0 3.5E+02 0.012 23.3 26.2 185 158-364 6-230 (312)
380 1zvt_A Topoisomerase IV subuni 23.4 3.2E+02 0.011 22.7 10.8 140 120-262 4-162 (256)
381 1nkz_B Light-harvesting protei 21.2 73 0.0025 18.2 2.3 17 3-19 3-19 (41)
382 1q47_A Semaphorin 3A; beta pro 20.5 2.4E+02 0.0081 26.4 7.2 55 306-360 423-487 (495)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-74 Score=550.47 Aligned_cols=406 Identities=70% Similarity=1.198 Sum_probs=293.6
Q ss_pred CCCChhhHHHHHHHHHHHHHhcChHHHHHHHHhhcCCC--hhhhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy226 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLP--AEVEKKYSGLLEKKWTSVIRLQKKVIELESKLSEAEKEYV 78 (406)
Q Consensus 1 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 78 (406)
|+||+||++||+++|++||+++++.+++++|+.|..++ .+..+.+.++++++|.+++++|+++++++.++.+...++.
T Consensus 1 ~~~~~~q~~~~~~~i~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (410)
T 1vyh_C 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFT 80 (410)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhCCCCCcchhhhhhchhhhhhhheeeHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999988654 3445678899999999999999999999988877766665
Q ss_pred hCCCCCCCCCCCcCCCCCCceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECC
Q psy226 79 EGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158 (406)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~ 158 (406)
...+......+..|.|..+....+.+|.++|++++|+|++++|++|+.||+|+|||+.+++....+.+|.+.|.+++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~ 160 (410)
T 1vyh_C 81 SGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDH 160 (410)
T ss_dssp -----------CCCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECT
T ss_pred ccCCccccCCccccccCCCceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcC
Confidence 55454555567788898888889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEE
Q psy226 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238 (406)
Q Consensus 159 ~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l 238 (406)
+|++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++++|++|+.|++|++||+.++.++..+.+|..+|.++
T Consensus 161 ~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~ 240 (410)
T 1vyh_C 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240 (410)
T ss_dssp TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCC--CCCCCCCEEEEEeCCCcE
Q psy226 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRP--PGQGGGPYLATGSRDKTI 316 (406)
Q Consensus 239 ~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~s~~~d~~i 316 (406)
.++|++.+|++|+.|++|++||+.+......+.+|...|.++.|+|......+....... .....+.+|++|+.|+.|
T Consensus 241 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 999999999999999999999999999999999999999999999975433322211111 111247799999999999
Q ss_pred EEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeC
Q psy226 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV 396 (406)
Q Consensus 317 ~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~ 396 (406)
++||++++.++..+.+|..+|++++|+|+|++|++|+.||+|++||+.+++++.++.+|...|++++|+|++++|+|||.
T Consensus 321 ~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~ 400 (410)
T 1vyh_C 321 KMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 400 (410)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEET
T ss_pred EEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeecC
Q psy226 397 DKTVKVWECR 406 (406)
Q Consensus 397 Dg~v~iw~~~ 406 (406)
||+|++|++|
T Consensus 401 D~~i~vW~~r 410 (410)
T 1vyh_C 401 DQTVKVWECR 410 (410)
T ss_dssp TSEEEEEC--
T ss_pred CCcEEEEeCC
Confidence 9999999986
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-54 Score=401.39 Aligned_cols=329 Identities=24% Similarity=0.409 Sum_probs=287.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCC--CCCCCCCcCCCCCCceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy226 56 VIRLQKKVIELESKLSEAEKEYVEGAPT--RAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLW 133 (406)
Q Consensus 56 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vw 133 (406)
..+|+++..+|++++.+..+........ .....+.. .........+.||.++|++++|+|++++|++|+.||+|++|
T Consensus 4 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iW 82 (340)
T 1got_B 4 LDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVG-RIQMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIW 82 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCHHHHTTTSCCCC-CCCCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccchhHHhhcCCCccc-cccchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 3456777777777766555443211100 00000000 01223456799999999999999999999999999999999
Q ss_pred EcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCC----eEEEEEecCCcceEEEEEecCCCEEEEEe
Q psy226 134 DYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY----QCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209 (406)
Q Consensus 134 d~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 209 (406)
|..+++....+..|...|.+++|+|+|++|++|+.|+.|++||+.+. .....+.+|...|.++.|+|++. +++++
T Consensus 83 d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s 161 (340)
T 1got_B 83 DSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSS 161 (340)
T ss_dssp ETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEE
T ss_pred ECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEE
Confidence 99999999999999999999999999999999999999999999764 45677889999999999998764 88999
Q ss_pred CCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCcc
Q psy226 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE 289 (406)
Q Consensus 210 ~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 289 (406)
.|++|++||+.++.++..+.+|...|.+++|+|++.++++|+.|++|++||++++.....+.+|...|.+++|+|
T Consensus 162 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p----- 236 (340)
T 1got_B 162 GDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP----- 236 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECT-----
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC--CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy226 290 SISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG--HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~--h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~ 367 (406)
++.+|++|+.|++|++||+++++.+..+.. +...|++++|+|+|++|++|+.|+.|++||+.+++
T Consensus 237 -------------~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 237 -------------NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD 303 (340)
T ss_dssp -------------TSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred -------------CCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc
Confidence 477899999999999999999988877653 33579999999999999999999999999999999
Q ss_pred cceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 368 NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 368 ~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
.+..+.+|...|.+++|+|++.+|||||.||+|++||
T Consensus 304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999999999997
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.9e-54 Score=395.45 Aligned_cols=288 Identities=24% Similarity=0.450 Sum_probs=272.4
Q ss_pred EeccCCCCeEEEEEcCC----CCEEEEEeCCCcEEEEEcCCCcE--EEEecccccCeeeEEECCCCCEEEEEeCCCcEEE
Q psy226 101 ALSGHRSPVIKVIFHPV----FSLMASCSEDATIRLWDYETGEY--ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKL 174 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~----~~~latgs~dg~v~vwd~~~~~~--~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~v 174 (406)
.+.+|.++|++++|+|+ +.+|+||+.|++|+|||+.+++. ...+.+|...|.+++|++++.++++|+.|++|++
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~l 106 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 106 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEE
Confidence 45689999999999985 57999999999999999988764 4468899999999999999999999999999999
Q ss_pred EeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCC
Q psy226 175 WDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254 (406)
Q Consensus 175 wd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~ 254 (406)
||+.+++++..+..|...+.+++|+|++++|++|+.|+.|++||+.++.....+..|...|.+++|+|+|++|++|+.|+
T Consensus 107 Wd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg 186 (321)
T 3ow8_A 107 WDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 186 (321)
T ss_dssp EETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC
Q psy226 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~ 334 (406)
.|++||+++++.+..+.+|..+|.+++|+| ++.+|++|+.|+.|++||++++.++..+.+|.
T Consensus 187 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp------------------d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~ 248 (321)
T 3ow8_A 187 IINIFDIATGKLLHTLEGHAMPIRSLTFSP------------------DSQLLVTASDDGYIKIYDVQHANLAGTLSGHA 248 (321)
T ss_dssp CEEEEETTTTEEEEEECCCSSCCCEEEECT------------------TSCEEEEECTTSCEEEEETTTCCEEEEECCCS
T ss_pred eEEEEECCCCcEEEEEcccCCceeEEEEcC------------------CCCEEEEEcCCCeEEEEECCCcceeEEEcCCC
Confidence 999999999999999999999999999998 46799999999999999999999999999999
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
..|.+++|+|++++|++|+.|++|++||+.+++++.++..|...|.+++|+|++.+|++++.||+|++||+.
T Consensus 249 ~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999984
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-52 Score=390.60 Aligned_cols=289 Identities=24% Similarity=0.368 Sum_probs=269.4
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
....+.||.++|++++|+|++++||||+.||+|+|||..+++....+..|...|.+++|+|+|.+|++|+.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 45678999999999999999999999999999999999999998899999999999999999999999999999999998
Q ss_pred CCC------eEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECC--CCCEEEE
Q psy226 178 STY------QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP--DGTLLAS 249 (406)
Q Consensus 178 ~~~------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~s 249 (406)
... .....+.+|...|.+++|+|++..|++++.|++|++||+.++.++..+.+|...|.+++++| +|++|++
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~s 215 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVS 215 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEE
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEE
Confidence 532 23566778999999999999999999999999999999999999999999999999999987 5789999
Q ss_pred EeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy226 250 CSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFT 329 (406)
Q Consensus 250 ~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~ 329 (406)
|+.|++|++||+++++....+.+|...|.+++|+| ++.+|++|+.|++|++||++.++.+..
T Consensus 216 gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p------------------~~~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 216 GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYP------------------SGDAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT------------------TSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeC------------------CCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 99999999999999999999999999999999998 467899999999999999999988777
Q ss_pred EeCC--CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 330 LIGH--DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 330 ~~~h--~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
+..+ ...+.+++|+|+|++|++|+.|++|++||+.+++.+..+.+|...|++++|+|++++|++|+.||+|++|+
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 6544 34789999999999999999999999999999999999999999999999999999999999999999996
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.8e-53 Score=383.55 Aligned_cols=291 Identities=27% Similarity=0.423 Sum_probs=267.4
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
...++.+|.++|++++|+|++++|++|+.||+|++||+.+++....+.+|..+|.+++|+|++++|++|+.|++|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC-eEEEEeecCCccEEEEEECC-CCCEEEEEeCCCe
Q psy226 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG-YCVKTLTGHREWVRQIKVSP-DGTLLASCSNDHT 255 (406)
Q Consensus 178 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~ 255 (406)
.+++++..+.+|...|.+++|+|++.+|++|+.|++|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|++
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred CCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 999999999999999999999999999999999999999999887 55677899999999999999 6789999999999
Q ss_pred EEEEeCCCccceeEEe-cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC
Q psy226 256 ARVWSLATKETKAELR-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334 (406)
Q Consensus 256 v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~ 334 (406)
|++||++.......+. +|...+..+.|.|. +++.+|++|+.|++|++||+++++++..+.+|.
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~----------------~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~ 228 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPL----------------PDKPYMITASDDLTIKIWDYQTKSCVATLEGHM 228 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCS----------------TTCCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEc----------------CCCCEEEEEcCCCeEEEEeCCCCccceeeCCCC
Confidence 9999998776655554 56688999999873 246799999999999999999999999999999
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCC--EEEEeeCCCeEEEeec
Q psy226 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP--YVVTGSVDKTVKVWEC 405 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~--~l~sgs~Dg~v~iw~~ 405 (406)
..|.+++|+|++++|++|+.||+|++||..+++.++++..|...+.+++|+|++. ++|+|+.|| +.+|++
T Consensus 229 ~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~ 300 (304)
T 2ynn_A 229 SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSL 300 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEEC
T ss_pred CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEe
Confidence 9999999999999999999999999999999999999999999999999999885 688887665 556654
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.6e-53 Score=397.01 Aligned_cols=291 Identities=25% Similarity=0.436 Sum_probs=265.2
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
....+.||.++|++++|+|++++|+||+.||+|+|||..+++....+.+|...|.+++|+|+|++|++|+.|+.|++||+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-------eEEEEEecCCcceEEEEEecCC-CEEEEEeCCCcEEEEEcCCCeEEEEe-----ecCCccEEEEEECC-C
Q psy226 178 STY-------QCLKTMQGHDHNVTGVAFLPNS-DFVLSASRDKTIKMWEVATGYCVKTL-----TGHREWVRQIKVSP-D 243 (406)
Q Consensus 178 ~~~-------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~iwd~~~~~~~~~~-----~~~~~~v~~l~~~~-~ 243 (406)
.+. .....+.+|...|.++.|+|++ ..|++|+.|++|++||+.++.++..+ .+|...|.+++++| +
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 642 2345678999999999999975 57999999999999999999988877 67999999999987 8
Q ss_pred CCEEEEEeCCCeEEEEeCC-CccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECC
Q psy226 244 GTLLASCSNDHTARVWSLA-TKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG 322 (406)
Q Consensus 244 ~~~l~s~~~d~~v~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~ 322 (406)
+++|++|+.|++|++||++ .......+.+|...|.+++|+| ++.+|++|+.|++|++||++
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p------------------~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFP------------------DGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECT------------------TSSEEEEECSSSCEEEEETT
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEec------------------CCCeEEEEcCCCeEEEEECC
Confidence 8999999999999999998 4567788999999999999998 47799999999999999999
Q ss_pred CCeEEEEEeCCC-------cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee----ccccceEEEEEEeCCCCEE
Q psy226 323 SGSLLFTLIGHD-------NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL----EAHSHFVTSLDFHRAHPYV 391 (406)
Q Consensus 323 ~~~~~~~~~~h~-------~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l----~~h~~~v~~l~~~~~~~~l 391 (406)
++..+..+..+. ..|++++|+|+|++|++|+.||.|++||..+++.+..+ .+|.+.|++++|+|++.+|
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 359 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSAL 359 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEE
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEE
Confidence 999988876543 24899999999999999999999999999988877766 6799999999999999999
Q ss_pred EEeeCCCeEEEeecC
Q psy226 392 VTGSVDKTVKVWECR 406 (406)
Q Consensus 392 ~sgs~Dg~v~iw~~~ 406 (406)
+|||.||+|++|++.
T Consensus 360 ~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 360 CTGSWDKNLKIWAFS 374 (380)
T ss_dssp EEECTTSCEEEEECC
T ss_pred EEeeCCCCEEEEecC
Confidence 999999999999963
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.1e-50 Score=368.90 Aligned_cols=295 Identities=34% Similarity=0.630 Sum_probs=272.1
Q ss_pred CCCCCceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcE
Q psy226 93 IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSL 172 (406)
Q Consensus 93 ~~~~~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i 172 (406)
.|.......+.+|..+|++++|+|++++|++|+.||.|++||..+++....+.+|...|.+++|+|++++|++|+.|+.|
T Consensus 10 ~~~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 10 KPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp CCCCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 34455677899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeC
Q psy226 173 KLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN 252 (406)
Q Consensus 173 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~ 252 (406)
++||+.+++++..+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+..|...|.+++|+|++++|++|+.
T Consensus 90 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 90 KIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeCCCccceeEEe-cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q psy226 253 DHTARVWSLATKETKAELR-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI 331 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~ 331 (406)
|+.|++||+++.+....+. .+...+..++|+| ++.++++++.|+.|++||+++++++..+.
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 231 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP------------------NGKYILAATLDNTLKLWDYSKGKCLKTYT 231 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECT------------------TSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECC------------------CCCEEEEEcCCCeEEEEECCCCcEEEEEE
Confidence 9999999999887766554 4567899999998 47799999999999999999999999999
Q ss_pred CCCcCEE---EEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEee--CCCeEEEeec
Q psy226 332 GHDNWVR---GVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS--VDKTVKVWEC 405 (406)
Q Consensus 332 ~h~~~v~---~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs--~Dg~v~iw~~ 405 (406)
+|...+. .....+++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++ .|++|++|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 232 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp SSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred ecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 8876432 223346789999999999999999999999999999999999999999999999987 6999999985
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-51 Score=381.37 Aligned_cols=284 Identities=21% Similarity=0.314 Sum_probs=244.0
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-----------cEEEEecccccCeeeEEECCCCCEEEEEeCCCc
Q psy226 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-----------EYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171 (406)
Q Consensus 103 ~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~-----------~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~ 171 (406)
..|...|.+++|+|+|.+|++++ |+++++||.... ........|...|.+++|+|++ .|++|+.||+
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 35778899999999999999888 778888873211 1111122356789999999985 6889999999
Q ss_pred EEEEeCCCCeEEE----EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCC-CE
Q psy226 172 LKLWDMSTYQCLK----TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-TL 246 (406)
Q Consensus 172 i~vwd~~~~~~~~----~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-~~ 246 (406)
|+|||+.+++.+. .+.+|...|.+++|+|++++|++|+.|++|++||+.++.++..+.+|...|.+++|+|++ .+
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 9999998876543 345899999999999999999999999999999999999999999999999999999988 47
Q ss_pred EEEEeCCCeEEEEeCCCccceeEEe--cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCC
Q psy226 247 LASCSNDHTARVWSLATKETKAELR--GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG 324 (406)
Q Consensus 247 l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~ 324 (406)
|++|+.|++|++||+++++....+. .|...+.+++|+|. ++.++++|+.|+.|++||++++
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~-----------------~~~~l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQ-----------------QSEVFVFGDENGTVSLVDTKST 247 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSS-----------------CTTEEEEEETTSEEEEEESCC-
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCC-----------------CCcceEEeccCCcEEEEECCCC
Confidence 8999999999999999988877664 45567899999884 4678999999999999999999
Q ss_pred eEEEEEeCCCcCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCC-EEEEeeCCCeEEE
Q psy226 325 SLLFTLIGHDNWVRGVTFHPGG-KYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP-YVVTGSVDKTVKV 402 (406)
Q Consensus 325 ~~~~~~~~h~~~v~~l~~s~~g-~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~-~l~sgs~Dg~v~i 402 (406)
+++..+.+|...|++++|+|+| ++|++||.|++|+|||+.+++.+ .+.+|.+.|++|+|+|+++ +|+|||.||+|++
T Consensus 248 ~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 248 SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp -CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 9999999999999999999998 57999999999999999988765 5788999999999999986 6789999999999
Q ss_pred eecC
Q psy226 403 WECR 406 (406)
Q Consensus 403 w~~~ 406 (406)
|++.
T Consensus 327 w~v~ 330 (344)
T 4gqb_B 327 HVVP 330 (344)
T ss_dssp EECC
T ss_pred EECC
Confidence 9863
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.4e-50 Score=368.99 Aligned_cols=285 Identities=28% Similarity=0.532 Sum_probs=258.8
Q ss_pred EEeccCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCC-----cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEE
Q psy226 100 FALSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDYETG-----EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~-~~latgs~dg~v~vwd~~~~-----~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~ 173 (406)
..|.||.++|++++|+|++ ++|+||+.|++|++||+.+. .....+.+|...|.+++|+|+|++|++|+.|++|+
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~ 90 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR 90 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence 4688999999999999975 89999999999999998642 34567889999999999999999999999999999
Q ss_pred EEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCC------CCEE
Q psy226 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD------GTLL 247 (406)
Q Consensus 174 vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l 247 (406)
+||+.+++++..+.+|...|.+++|+|++.+|++|+.|++|++||++ +.++..+.+|...|.++.+.|. +..+
T Consensus 91 ~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 91 LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEE
T ss_pred EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEE
Confidence 99999999999999999999999999999999999999999999996 5678889999999999999985 4589
Q ss_pred EEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy226 248 ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLL 327 (406)
Q Consensus 248 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~ 327 (406)
++++.|+.|++||+++......+.+|...|.+++|+| ++.+|++|+.|+.|++||+.+++++
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp------------------~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP------------------DGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT------------------TSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC------------------CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 9999999999999999888888999999999999998 4789999999999999999999999
Q ss_pred EEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeec--------cccceEEEEEEeCCCCEEEEeeCCCe
Q psy226 328 FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE--------AHSHFVTSLDFHRAHPYVVTGSVDKT 399 (406)
Q Consensus 328 ~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~--------~h~~~v~~l~~~~~~~~l~sgs~Dg~ 399 (406)
..+..+ ..|.+++|+|++.+|++++.+ .+++|++.....+..+. .|...+.+++|+|++++|++|+.||.
T Consensus 232 ~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~ 309 (319)
T 3frx_A 232 YTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNV 309 (319)
T ss_dssp EEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCce
Confidence 888765 579999999999999988865 59999998766555443 35667999999999999999999999
Q ss_pred EEEeec
Q psy226 400 VKVWEC 405 (406)
Q Consensus 400 v~iw~~ 405 (406)
|++||+
T Consensus 310 i~vWd~ 315 (319)
T 3frx_A 310 IRVWQV 315 (319)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999996
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-50 Score=374.46 Aligned_cols=290 Identities=28% Similarity=0.499 Sum_probs=254.9
Q ss_pred eEEeccCCC-CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE---EecccccCeeeEEECCCCCEEEEEeCCCcEEE
Q psy226 99 KFALSGHRS-PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER---ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKL 174 (406)
Q Consensus 99 ~~~l~~h~~-~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~---~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~v 174 (406)
...+.+|.. +|.+++|+|++++||+|+.|++|+|||+.++.... ...+|...|.+++|+|+|++|++|+.|++|++
T Consensus 8 ~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 8 LGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCI 87 (345)
T ss_dssp EEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEE
Confidence 346789988 99999999999999999999999999999886432 23689999999999999999999999999999
Q ss_pred EeCCCC--eEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC---eEEEEeecCCccEEEEEECCCCCEEEE
Q psy226 175 WDMSTY--QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG---YCVKTLTGHREWVRQIKVSPDGTLLAS 249 (406)
Q Consensus 175 wd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~s 249 (406)
||+.+. +++..+.+|...|.+++|+|++++|++|+.|++|++||+.++ .++..+.+|...|.+++|+|++.+|++
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s 167 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLAS 167 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEE
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEE
Confidence 998765 567889999999999999999999999999999999999875 456778899999999999999999999
Q ss_pred EeCCCeEEEEeCCCcc--ceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC----
Q psy226 250 CSNDHTARVWSLATKE--TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS---- 323 (406)
Q Consensus 250 ~~~d~~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~---- 323 (406)
|+.|++|++||+.... ....+.+|...|.+++|+| ++.+|++|+.|++|++||...
T Consensus 168 ~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp------------------~g~~l~s~s~D~~v~iW~~~~~~~~ 229 (345)
T 3fm0_A 168 ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP------------------SGQRLASCSDDRTVRIWRQYLPGNE 229 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECT------------------TSSEEEEEETTSCEEEEEEECTTCT
T ss_pred EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECC------------------CCCEEEEEeCCCeEEEeccccCCCC
Confidence 9999999999998764 3467889999999999998 478999999999999999632
Q ss_pred -----------CeEEEEEeC-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc---------ceeeccccceEEEE
Q psy226 324 -----------GSLLFTLIG-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN---------MKTLEAHSHFVTSL 382 (406)
Q Consensus 324 -----------~~~~~~~~~-h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~---------~~~l~~h~~~v~~l 382 (406)
.+++..+.+ |...|.+++|+|++..|++++.|+.|++|+...... .....+|...|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v 309 (345)
T 3fm0_A 230 QGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCV 309 (345)
T ss_dssp TCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEE
T ss_pred ccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEe
Confidence 134556665 889999999999999999999999999999865421 12235789999999
Q ss_pred EEeCCCC-EEEEeeCCCeEEEeecC
Q psy226 383 DFHRAHP-YVVTGSVDKTVKVWECR 406 (406)
Q Consensus 383 ~~~~~~~-~l~sgs~Dg~v~iw~~~ 406 (406)
+|+|++. +|||||.||+|++|+.+
T Consensus 310 ~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 310 AWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp EECSSSTTEEEEEETTSCEEEEEEC
T ss_pred EEeCCCceEEEEcCCCCcEEEEEec
Confidence 9999984 99999999999999963
No 11
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-50 Score=369.14 Aligned_cols=290 Identities=25% Similarity=0.391 Sum_probs=244.9
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--cEEEEe-cc-cccCeeeEEECCCCCEEEEEeCCCcEE
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG--EYERAL-HG-HLDSVQDIAFDQSGKLLVSCSADMSLK 173 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~--~~~~~~-~~-h~~~V~~l~~~~~g~~l~sgs~d~~i~ 173 (406)
....+.+|.++|++++|+|+ +||+|+.|++|++||+.++ .....+ .+ |...|.+++|+|++++|++|+.|++|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 34568899999999999998 9999999999999999875 344555 44 999999999999999999999999999
Q ss_pred EEeCC-------CCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC----CeEEEEeecCCccEEEEEECC
Q psy226 174 LWDMS-------TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT----GYCVKTLTGHREWVRQIKVSP 242 (406)
Q Consensus 174 vwd~~-------~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~----~~~~~~~~~~~~~v~~l~~~~ 242 (406)
+||+. +.+++..+.+|...|.+++|+|++++|++|+.|++|++||+.. ..++..+.+|...|.+++|+|
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p 163 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP 163 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC
Confidence 99984 3456778899999999999999999999999999999999943 256788899999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCc--cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEE
Q psy226 243 DGTLLASCSNDHTARVWSLATK--ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWD 320 (406)
Q Consensus 243 ~~~~l~s~~~d~~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd 320 (406)
++.+|++|+.|++|++||..+. ..+..+.+|...|.++.|+|.. .+.+|++|+.|++|++||
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----------------~~~~l~s~s~D~~v~iw~ 227 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE----------------GVFRLCSGSDDSTVRVWK 227 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS----------------SSCEEEEEETTSCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC----------------CeeEEEEEeCCCeEEEEE
Confidence 9999999999999999998765 5677889999999999999841 256799999999999999
Q ss_pred CCCC--------eEEEEEeC-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--cce-eeccccc-eEEEEEEeC-
Q psy226 321 VGSG--------SLLFTLIG-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR--NMK-TLEAHSH-FVTSLDFHR- 386 (406)
Q Consensus 321 ~~~~--------~~~~~~~~-h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~--~~~-~l~~h~~-~v~~l~~~~- 386 (406)
+..+ .+...+.+ |...|.+++|++++ +|++|+.||+|+|||..+++ ... .+.+|.. .|.+++|+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~ 306 (330)
T 2hes_X 228 YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLEL 306 (330)
T ss_dssp EEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC--
T ss_pred ecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecC
Confidence 8654 44555655 99999999999765 89999999999999987763 232 2356876 899999999
Q ss_pred -CCCEEEEeeCCCeEEEeecC
Q psy226 387 -AHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 387 -~~~~l~sgs~Dg~v~iw~~~ 406 (406)
++.+|||||.||+|++|++.
T Consensus 307 ~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 307 NGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp ---CCEEEEETTSEEEEEEC-
T ss_pred CCceEEEEecCCCcEEEEEec
Confidence 68999999999999999973
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-49 Score=375.74 Aligned_cols=283 Identities=27% Similarity=0.527 Sum_probs=256.9
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEeccccc------------------CeeeEEECCCCCEEEE
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD------------------SVQDIAFDQSGKLLVS 165 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~------------------~V~~l~~~~~g~~l~s 165 (406)
+|.++|++++|+|++++||+|+ ++++++|++.+++....+..|.. .|++++|+|+|++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 7999999999999999999987 78999999999998887766542 3899999999999999
Q ss_pred EeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECC-CC
Q psy226 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP-DG 244 (406)
Q Consensus 166 gs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~ 244 (406)
|+.|++|++||+.+++.+..+.+|...|.+++|+|++++|++|+.|++|++||++++.+...+. +...+.+++++| ++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDG 219 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999998887775 556799999999 89
Q ss_pred CEEEEEeCCCeEEEEeCCCccceeEE-------ecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEE
Q psy226 245 TLLASCSNDHTARVWSLATKETKAEL-------RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIK 317 (406)
Q Consensus 245 ~~l~s~~~d~~v~vwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 317 (406)
++|++|+.|+.|++||++++.....+ .+|...|.+++|+| ++.+|++|+.|+.|+
T Consensus 220 ~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~------------------~g~~l~s~s~d~~v~ 281 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR------------------DGQSVVSGSLDRSVK 281 (393)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT------------------TSSEEEEEETTSEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC------------------CCCEEEEEeCCCEEE
Confidence 99999999999999999988776655 57899999999998 477899999999999
Q ss_pred EEECCC------------CeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEe
Q psy226 318 LWDVGS------------GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385 (406)
Q Consensus 318 lwd~~~------------~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~ 385 (406)
+||+++ +.+...+.+|...|.+++|+|++++|++|+.|+.|++||..+++.+..+.+|...|.+++|+
T Consensus 282 ~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~ 361 (393)
T 1erj_A 282 LWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVA 361 (393)
T ss_dssp EEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEec
Confidence 999875 34567788999999999999999999999999999999999999999999999999999988
Q ss_pred C------CCCEEEEeeCCCeEEEeecC
Q psy226 386 R------AHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 386 ~------~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+ ++.+|||||.||+|++|+++
T Consensus 362 ~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 362 NGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp SSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCcCcCCCCCEEEEECCCCcEEECccc
Confidence 6 68899999999999999963
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.2e-51 Score=379.29 Aligned_cols=285 Identities=19% Similarity=0.303 Sum_probs=245.6
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEEcCCCcEE----EEecccccCeeeEEECCCCCEEEEEeCCCcE
Q psy226 103 SGHRSPVIKVIFHPVFSLMASCSE------DATIRLWDYETGEYE----RALHGHLDSVQDIAFDQSGKLLVSCSADMSL 172 (406)
Q Consensus 103 ~~h~~~V~~v~~~p~~~~latgs~------dg~v~vwd~~~~~~~----~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i 172 (406)
.+|...|++|+|+|||++||+||. |++|++|+..++... ....+|...|.+++|+|++. +++++.||+|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 579999999999999999999997 788999998776532 23456889999999999975 5567899999
Q ss_pred EEEeCCCCeEE----EEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCC-EE
Q psy226 173 KLWDMSTYQCL----KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LL 247 (406)
Q Consensus 173 ~vwd~~~~~~~----~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l 247 (406)
++||+.+++.. ....+|...|.+++|+|++++|++|+.|++|++||+.++.++..+.+|...|++++|+|++. ++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 99999877653 23457999999999999999999999999999999999999999999999999999999875 78
Q ss_pred EEEeCCCeEEEEeCCCccceeEE--ecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe
Q psy226 248 ASCSNDHTARVWSLATKETKAEL--RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS 325 (406)
Q Consensus 248 ~s~~~d~~v~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~ 325 (406)
++++.|++|++||+++++....+ ..|...+.+++|+|. .+.+|++|+.|+.|++||+++++
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~-----------------~~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE-----------------KDDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT-----------------STTEEEEEESSSCEEEEESSCGG
T ss_pred eeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc-----------------ccceEEEeecccceeEEECCCCc
Confidence 99999999999999988766544 356678999999984 45689999999999999999999
Q ss_pred EEEEEeCCCcCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeC-CCCEEEEeeCCCeEEEe
Q psy226 326 LLFTLIGHDNWVRGVTFHPGG-KYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR-AHPYVVTGSVDKTVKVW 403 (406)
Q Consensus 326 ~~~~~~~h~~~v~~l~~s~~g-~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~-~~~~l~sgs~Dg~v~iw 403 (406)
++..+.+|...|++++|+|++ ++|++|+.|++|+|||+.+++.+..+ +|...|++|+|+| ++.+|+|||.||+|++|
T Consensus 261 ~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW 339 (357)
T 4g56_B 261 SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHH 339 (357)
T ss_dssp GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEE
T ss_pred EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEE
Confidence 999999999999999999987 57999999999999999998887665 7999999999998 78999999999999999
Q ss_pred ecC
Q psy226 404 ECR 406 (406)
Q Consensus 404 ~~~ 406 (406)
++.
T Consensus 340 ~~~ 342 (357)
T 4g56_B 340 HLP 342 (357)
T ss_dssp ECC
T ss_pred ECC
Confidence 973
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=4.4e-49 Score=365.28 Aligned_cols=285 Identities=25% Similarity=0.462 Sum_probs=248.4
Q ss_pred eEEeccCCCCeEEEEE-----cC-CCCEEEEEeCCCcEEEEEcCCC-------cEEEEecccccCeeeEEECCCCCEEEE
Q psy226 99 KFALSGHRSPVIKVIF-----HP-VFSLMASCSEDATIRLWDYETG-------EYERALHGHLDSVQDIAFDQSGKLLVS 165 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~-----~p-~~~~latgs~dg~v~vwd~~~~-------~~~~~~~~h~~~V~~l~~~~~g~~l~s 165 (406)
...+.||.++|++++| +| ++++|+||+.|++|++||+.++ .....+.+|...|.+++|+|++.+|++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 4568899999999999 76 8999999999999999998753 346678899999999999999999999
Q ss_pred EeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEee---cCCccEEEEEECC
Q psy226 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT---GHREWVRQIKVSP 242 (406)
Q Consensus 166 gs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~~~~~v~~l~~~~ 242 (406)
|+.|++|++||+.+++++..+.+|...|.+++|+|++++|++|+.|++|++||+.. .+..... +|..+|.+++|+|
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECC
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeecc
Confidence 99999999999999999999999999999999999999999999999999999974 3333433 7889999999999
Q ss_pred CC----------CEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC
Q psy226 243 DG----------TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR 312 (406)
Q Consensus 243 ~~----------~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 312 (406)
++ .+|++++.|+.|++||. .......+.+|...|.+++|+| ++.+|++|+.
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~------------------~g~~l~sgs~ 233 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISP------------------NGKYIATGGK 233 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECT------------------TSSEEEEEET
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECC------------------CCCEEEEEcC
Confidence 87 78999999999999994 4556677889999999999998 4789999999
Q ss_pred CCcEEEEECCC-CeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccce--eec-----------cccce
Q psy226 313 DKTIKLWDVGS-GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK--TLE-----------AHSHF 378 (406)
Q Consensus 313 d~~i~lwd~~~-~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~--~l~-----------~h~~~ 378 (406)
|+.|++||+.. ......+ .+...|.+++|+|+++++++| .|+.|++||+.+++... .+. +|...
T Consensus 234 dg~v~iwd~~~~~~~~~~~-~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (343)
T 2xzm_R 234 DKKLLIWDILNLTYPQREF-DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQ 311 (343)
T ss_dssp TCEEEEEESSCCSSCSEEE-ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCC
T ss_pred CCeEEEEECCCCcccceee-cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCc
Confidence 99999999954 3333333 345679999999999988755 57789999998766543 333 67788
Q ss_pred EEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 379 VTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 379 v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
|.+++|+|++++|++|+.||+|++|++
T Consensus 312 v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 312 CTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp EEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred eEEEEECCCCCeEEEecCCceEEEEEE
Confidence 999999999999999999999999996
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.9e-49 Score=391.98 Aligned_cols=305 Identities=22% Similarity=0.345 Sum_probs=260.4
Q ss_pred EEeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 100 FALSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
..+.+|..+|++++|+|+++ .|++|+.|++|++||..+++....+.+|.+.|.+++|+|+|++|++|+.|++|++||+.
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 35789999999999999987 69999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEe-------cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEE-------------------------
Q psy226 179 TYQCLKTMQ-------GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK------------------------- 226 (406)
Q Consensus 179 ~~~~~~~~~-------~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~------------------------- 226 (406)
+++++..+. +|...|.+++|+|++++|++|+.|++|++||+.++.++.
T Consensus 221 ~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 300 (611)
T 1nr0_A 221 DGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 300 (611)
T ss_dssp TCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEE
T ss_pred CCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEE
Confidence 999888874 799999999999999999999999999999998876543
Q ss_pred ------------------EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEE-ecCCceEEEEEeCCCCC
Q psy226 227 ------------------TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL-RGHDHTVECVAWAPGVA 287 (406)
Q Consensus 227 ------------------~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 287 (406)
.+.+|...|.+++|+|+|++|++++.|++|++||+.++.....+ .+|...|.+++|+++..
T Consensus 301 s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 301 SANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD 380 (611)
T ss_dssp ETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC
T ss_pred eCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCc
Confidence 34578999999999999999999999999999999887665444 46777788877765421
Q ss_pred ccccc--------c----------------------c---------------------------------cCCCCCCCCC
Q psy226 288 SESIS--------E----------------------A---------------------------------AGRPPGQGGG 304 (406)
Q Consensus 288 ~~~~~--------~----------------------~---------------------------------~~~~~~~~~~ 304 (406)
..... . . .......++|
T Consensus 381 l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg 460 (611)
T 1nr0_A 381 LFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDK 460 (611)
T ss_dssp EEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTS
T ss_pred EEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCC
Confidence 00000 0 0 0001123468
Q ss_pred CEEEEEeCCCcEEEEECCCCeE--EEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Ccccee--eccccceE
Q psy226 305 PYLATGSRDKTIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN-KRNMKT--LEAHSHFV 379 (406)
Q Consensus 305 ~~l~s~~~d~~i~lwd~~~~~~--~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~-~~~~~~--l~~h~~~v 379 (406)
.+|++|+.|++|++||+.++.. +.. .+|...|++++|+|+|++|++++.|++|++||+.+ ++.... +..|...|
T Consensus 461 ~~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V 539 (611)
T 1nr0_A 461 QFVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKV 539 (611)
T ss_dssp CEEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCE
T ss_pred CEEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccce
Confidence 8999999999999999987654 234 68999999999999999999999999999999987 555544 34599999
Q ss_pred EEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 380 TSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 380 ~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
++++|+|++++|||||.|++|++|++
T Consensus 540 ~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 540 ACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eEEEECCCCCEEEEEECCCcEEEEEC
Confidence 99999999999999999999999996
No 16
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.8e-47 Score=376.16 Aligned_cols=284 Identities=40% Similarity=0.665 Sum_probs=263.7
Q ss_pred CceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 97 ~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
.....+.+|..+|.+++|+|++.+|++++.||+|++||..+. ....+.+|...|.+++|+|+|++|++|+.|+.|++||
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 334567899999999999999999999999999999998655 4567889999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeE
Q psy226 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v 256 (406)
. +++.+..+.+|...|.+++|+|++++|++++.|+.|++||. ++..+..+.+|...|.+++|+|++++|++++.|+.|
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v 450 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTV 450 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEE
Confidence 6 56788899999999999999999999999999999999995 677888999999999999999999999999999999
Q ss_pred EEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC
Q psy226 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336 (406)
Q Consensus 257 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~ 336 (406)
++||. +.+....+.+|...|.+++|+| ++.+|++++.|+.|++||. +++++..+.+|...
T Consensus 451 ~~w~~-~~~~~~~~~~~~~~v~~~~~sp------------------d~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~ 510 (577)
T 2ymu_A 451 KLWNR-NGQLLQTLTGHSSSVRGVAFSP------------------DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 510 (577)
T ss_dssp EEEET-TSCEEEEEECCSSCEEEEEECT------------------TSCEEEEEETTSEEEEEET-TSCEEEEEECCSSC
T ss_pred EEEEC-CCCEEEEEcCCCCCEEEEEEcC------------------CCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCC
Confidence 99996 4567788899999999999998 4779999999999999995 78899999999999
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 337 VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 337 v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
|++++|+|+|++|++++.||.|++||. +++.+.++.+|...|++++|+|++++|+|+|.||+|++||
T Consensus 511 v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 511 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999999999995 6788899999999999999999999999999999999997
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.9e-47 Score=379.73 Aligned_cols=287 Identities=22% Similarity=0.360 Sum_probs=254.0
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--EEEEecccccCeeeEEECCCCCEEEEEeCC----Cc
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE--YERALHGHLDSVQDIAFDQSGKLLVSCSAD----MS 171 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d----~~ 171 (406)
....+.+|..+|++++|+|++++||+|+.||+|+|||+.+++ ....+.+|.+.|.+++|+|+|++|++++.+ +.
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 345688999999999999999999999999999999987543 456788999999999999999999998875 46
Q ss_pred EEEEeCCCCeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEE
Q psy226 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASC 250 (406)
Q Consensus 172 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~ 250 (406)
|++||. ++....+.+|...|.+++|+|++. .|++|+.|++|++||..++++...+.+|...|.+++|+|+|++|++|
T Consensus 131 v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 131 VFLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 208 (611)
T ss_dssp EEETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEE
Confidence 777774 556677899999999999999987 69999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCccceeEEe-------cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC
Q psy226 251 SNDHTARVWSLATKETKAELR-------GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS 323 (406)
Q Consensus 251 ~~d~~v~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~ 323 (406)
+.|++|++||+.+++....+. +|...|.+++|+|+ +.+|++++.|++|++||+.+
T Consensus 209 s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd------------------g~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD------------------GTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT------------------SSEEEEEETTSEEEEEETTT
T ss_pred ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC------------------CCEEEEEeCCCeEEEEeCCC
Confidence 999999999999888777774 79999999999984 66788888888888888776
Q ss_pred CeEE-------------------------------------------EEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy226 324 GSLL-------------------------------------------FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRV 360 (406)
Q Consensus 324 ~~~~-------------------------------------------~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~v 360 (406)
++++ ..+.+|...|++++|+|+|++|++++.|++|++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINS 350 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 6544 344589999999999999999999999999999
Q ss_pred EeCCCCccceee-ccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 361 WDTANKRNMKTL-EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 361 wd~~~~~~~~~l-~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
||+.+++....+ ..|...|.+++|++++ .|++++.|+++++|+.
T Consensus 351 Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~ 395 (611)
T 1nr0_A 351 WDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPA 395 (611)
T ss_dssp EETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECS
T ss_pred EECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEeec
Confidence 999998877665 6799999999999776 6889999999999985
No 18
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-46 Score=347.43 Aligned_cols=290 Identities=21% Similarity=0.345 Sum_probs=269.1
Q ss_pred CceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 97 ~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
.....+.+|.++|++++|+|++++|++|+.||.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 102 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWD 102 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 44567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEEcCCCe-----------EEEEeecCCc--cEEEE
Q psy226 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD-----KTIKMWEVATGY-----------CVKTLTGHRE--WVRQI 238 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~iwd~~~~~-----------~~~~~~~~~~--~v~~l 238 (406)
+.+++++..+. +...|.+++|+|++.++++++.+ +.|++||+..+. ....+..|.. .+.++
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 99999888887 88899999999999999999999 999999997653 3344556665 89999
Q ss_pred EECCCCCEEEEEeCCCeEEEEeCCC-ccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEE
Q psy226 239 KVSPDGTLLASCSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIK 317 (406)
Q Consensus 239 ~~~~~~~~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 317 (406)
+|+|+++++++++.||.|++||+.+ ......+..|...|.+++|+| ++.+|++++.|+.|+
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~------------------~~~~l~~~~~d~~i~ 243 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSP------------------DLTYFITSSRDTNSF 243 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECT------------------TSSEEEEEETTSEEE
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECC------------------CCCEEEEecCCceEE
Confidence 9999999999999999999999998 677888899999999999998 477899999999999
Q ss_pred EEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCC--------------eEEEEeCCCCccceeeccccceEEEEE
Q psy226 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK--------------TLRVWDTANKRNMKTLEAHSHFVTSLD 383 (406)
Q Consensus 318 lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~--------------~i~vwd~~~~~~~~~l~~h~~~v~~l~ 383 (406)
+||+++++.+..+. +...+.+++|+|+++++++++.++ .+++||..+++.+..+.+|...|++++
T Consensus 244 v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~ 322 (369)
T 3zwl_B 244 LVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVA 322 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEE
Confidence 99999999988887 777899999999999999999988 899999999999999999999999999
Q ss_pred EeCCCCEEEEeeCCCeEEEeecC
Q psy226 384 FHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 384 ~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|+|++++|++|+.||.|++|+++
T Consensus 323 ~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 323 ISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp ECTTSSEEEEEETTSEEEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEECc
Confidence 99999999999999999999974
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.7e-46 Score=342.75 Aligned_cols=288 Identities=31% Similarity=0.555 Sum_probs=256.8
Q ss_pred eEEeccCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCc-----EEEEecccccCeeeEEECCCCCEEEEEeCCCcE
Q psy226 99 KFALSGHRSPVIKVIFHPV-FSLMASCSEDATIRLWDYETGE-----YERALHGHLDSVQDIAFDQSGKLLVSCSADMSL 172 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~-~~~latgs~dg~v~vwd~~~~~-----~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i 172 (406)
+.+|.||.++|++|+|+|+ +++|||||.||+|+|||+.+++ ....+.+|...|.+++|+|+|++|++|+.|+.|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i 110 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL 110 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc
Confidence 3468999999999999998 5899999999999999987653 456788999999999999999999999999999
Q ss_pred EEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeE-EEEeecCCccEEEEEECCCC--CEEEE
Q psy226 173 KLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC-VKTLTGHREWVRQIKVSPDG--TLLAS 249 (406)
Q Consensus 173 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~-~~~~~~~~~~v~~l~~~~~~--~~l~s 249 (406)
++|+............+...+..+.++|++.+|++|+.|+.+++||+..... .....+|...+..++|++++ .++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 190 (340)
T 4aow_A 111 RLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVS 190 (340)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEE
T ss_pred eEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEE
Confidence 9999999988888888999999999999999999999999999999976544 33456889999999998865 57899
Q ss_pred EeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy226 250 CSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFT 329 (406)
Q Consensus 250 ~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~ 329 (406)
++.|+.|++||+.+.+....+.+|...|.+++|+| ++.+|++|+.|+.|++||+++++++..
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~------------------~~~~l~s~s~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP------------------DGSLCASGGKDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT------------------TSSEEEEEETTCEEEEEETTTTEEEEE
T ss_pred EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECC------------------CCCEEEEEeCCCeEEEEEeccCceeee
Confidence 99999999999999999999999999999999998 477999999999999999999999988
Q ss_pred EeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee---------ccccceEEEEEEeCCCCEEEEeeCCCeE
Q psy226 330 LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL---------EAHSHFVTSLDFHRAHPYVVTGSVDKTV 400 (406)
Q Consensus 330 ~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l---------~~h~~~v~~l~~~~~~~~l~sgs~Dg~v 400 (406)
+.++ ..|.+++|+|++.++ +++.|+.|++||+.++..+..+ ..|...|++++|+|++++|++|+.||.|
T Consensus 253 ~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v 330 (340)
T 4aow_A 253 LDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLV 330 (340)
T ss_dssp EECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred ecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 8765 579999999987655 5667999999999887665544 3678889999999999999999999999
Q ss_pred EEeecC
Q psy226 401 KVWECR 406 (406)
Q Consensus 401 ~iw~~~ 406 (406)
+|||++
T Consensus 331 ~iW~~~ 336 (340)
T 4aow_A 331 RVWQVT 336 (340)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 999973
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.9e-46 Score=341.72 Aligned_cols=251 Identities=27% Similarity=0.549 Sum_probs=233.2
Q ss_pred cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy226 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218 (406)
Q Consensus 139 ~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd 218 (406)
+..+++.+|.+.|.+++|+|++++|++|+.||+|++||+.+++.+..+.+|..+|.+++|+|++++|++|+.|++|++||
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 34677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCc-cceeEEecCCceEEEEEeCCCCCccccccccCC
Q psy226 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK-ETKAELRGHDHTVECVAWAPGVASESISEAAGR 297 (406)
Q Consensus 219 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 297 (406)
+.++.++..+.+|...|.+++|+|++.+|++|+.|++|++||+++. .....+.+|...|.+++|+|.
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~------------ 151 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK------------ 151 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT------------
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC------------
Confidence 9999999999999999999999999999999999999999999876 445678899999999999983
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCEEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCccceeecc
Q psy226 298 PPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI-GHDNWVRGVTFHP--GGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374 (406)
Q Consensus 298 ~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~h~~~v~~l~~s~--~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~ 374 (406)
++.+|++|+.|++|++||++++.....+. +|...+..+.|+| ++.+|++|+.|++|++||+.+++++.++.+
T Consensus 152 -----~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~ 226 (304)
T 2ynn_A 152 -----DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG 226 (304)
T ss_dssp -----CTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred -----CCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC
Confidence 35689999999999999998877665554 5667899999987 778999999999999999999999999999
Q ss_pred ccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 375 h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|...|.+++|+|++++|+||+.||+|++||.+
T Consensus 227 h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 227 HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999999999999999999999963
No 21
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.5e-46 Score=377.54 Aligned_cols=287 Identities=29% Similarity=0.538 Sum_probs=255.1
Q ss_pred EEeccCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCC-----cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEE
Q psy226 100 FALSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDYETG-----EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~-~~latgs~dg~v~vwd~~~~-----~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~ 173 (406)
..+.+|.+.|++|+|+|++ .+|+|||.||+|++||+.+. .....+.+|...|.+++|+|+|++|++|+.|++|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 4688999999999999875 79999999999999998763 34567889999999999999999999999999999
Q ss_pred EEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEe---ecCCccEEEEEECCCC--CEEE
Q psy226 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL---TGHREWVRQIKVSPDG--TLLA 248 (406)
Q Consensus 174 vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~~~~--~~l~ 248 (406)
+||+.++++...+.+|...|.+++|+|++++|++|+.|++|++||.......... .+|...|.+++|+|++ ..++
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 9999999999999999999999999999999999999999999998655433322 4689999999999987 6899
Q ss_pred EEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy226 249 SCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF 328 (406)
Q Consensus 249 s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~ 328 (406)
+|+.|++|++||+++......+.+|...|.+++|+| ++.+|++|+.|+.|++||+++++++.
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp------------------dg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP------------------DGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT------------------TSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC------------------CCCEEEEEeCCCeEEEEECCCCceEE
Confidence 999999999999999998999999999999999998 47799999999999999999999988
Q ss_pred EEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecccc-------------------ceEEEEEEeCCCC
Q psy226 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS-------------------HFVTSLDFHRAHP 389 (406)
Q Consensus 329 ~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~-------------------~~v~~l~~~~~~~ 389 (406)
.+.. ...|.+++|+|++.+|++++ |+.|+|||+.+++.+..+..+. ..+++++|+|+++
T Consensus 598 ~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~ 675 (694)
T 3dm0_A 598 SLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS 675 (694)
T ss_dssp CCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS
T ss_pred EecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC
Confidence 7764 45799999999999888776 5569999999988776664321 1378999999999
Q ss_pred EEEEeeCCCeEEEeecC
Q psy226 390 YVVTGSVDKTVKVWECR 406 (406)
Q Consensus 390 ~l~sgs~Dg~v~iw~~~ 406 (406)
+|+||+.||+|++|++.
T Consensus 676 ~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 676 TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEEETTSEEEEEEC-
T ss_pred EEEEEcCCCeEEEEecc
Confidence 99999999999999973
No 22
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.7e-47 Score=356.06 Aligned_cols=286 Identities=19% Similarity=0.323 Sum_probs=262.7
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc------EEEEecccccCeeeEEECCC----C---CEEEEE
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE------YERALHGHLDSVQDIAFDQS----G---KLLVSC 166 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~------~~~~~~~h~~~V~~l~~~~~----g---~~l~sg 166 (406)
..+.+|.++|++++|+| ++|++|+.||+|++||+.+++ ....+.+|...|.+++|+|+ | ++|++|
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 45789999999999999 899999999999999999988 67888899999999999999 9 999999
Q ss_pred eCCCcEEEEeCCCCeE-----EEEEecC-----CcceEEEEEe----cCCCE-EEEEeCCCcEEEEEcCC------CeEE
Q psy226 167 SADMSLKLWDMSTYQC-----LKTMQGH-----DHNVTGVAFL----PNSDF-VLSASRDKTIKMWEVAT------GYCV 225 (406)
Q Consensus 167 s~d~~i~vwd~~~~~~-----~~~~~~h-----~~~v~~~~~~----p~~~~-l~s~s~d~~i~iwd~~~------~~~~ 225 (406)
+.|+.|++||+.+++. +..+..| ...|.+++|+ |++++ |++++.|+.|++||+.+ +..+
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 9999999999988776 7888888 5899999999 99999 99999999999999988 6666
Q ss_pred E-----Eee-------cCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEec---C---CceEEEEEeCCCCC
Q psy226 226 K-----TLT-------GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG---H---DHTVECVAWAPGVA 287 (406)
Q Consensus 226 ~-----~~~-------~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~ 287 (406)
. .+. .|...|.+++|+|++ ++++++.|+.|++||+++.+....+.. | ...|.+++|+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~--- 243 (397)
T 1sq9_A 168 NWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP--- 243 (397)
T ss_dssp CCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS---
T ss_pred eccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC---
Confidence 5 664 488999999999999 999999999999999999988888988 9 99999999998
Q ss_pred ccccccccCCCCCCCCCCEEEEEeCC---CcEEEEECCCCeEEEEEeC-------------CCcCEEEEEEcCCCCEEEE
Q psy226 288 SESISEAAGRPPGQGGGPYLATGSRD---KTIKLWDVGSGSLLFTLIG-------------HDNWVRGVTFHPGGKYLVS 351 (406)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~lwd~~~~~~~~~~~~-------------h~~~v~~l~~s~~g~~l~s 351 (406)
++.+|++++.| +.|++||+++++.+..+.+ |...|.+++|+|++++|++
T Consensus 244 ---------------~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 308 (397)
T 1sq9_A 244 ---------------QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 308 (397)
T ss_dssp ---------------STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE
T ss_pred ---------------CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEE
Confidence 46789999999 9999999999999999998 9999999999999999999
Q ss_pred EeCCCeEEEEeCCCCccceeec------cc---------------cceEEEEEEeCCC----------CEEEEeeCCCeE
Q psy226 352 CGDDKTLRVWDTANKRNMKTLE------AH---------------SHFVTSLDFHRAH----------PYVVTGSVDKTV 400 (406)
Q Consensus 352 gs~d~~i~vwd~~~~~~~~~l~------~h---------------~~~v~~l~~~~~~----------~~l~sgs~Dg~v 400 (406)
|+.||.|++||+.+++.+.++. .| ...|++++|+|++ ++|++|+.||.|
T Consensus 309 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i 388 (397)
T 1sq9_A 309 AGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSI 388 (397)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEE
T ss_pred EeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcE
Confidence 9999999999999999999998 77 8999999999998 799999999999
Q ss_pred EEeecC
Q psy226 401 KVWECR 406 (406)
Q Consensus 401 ~iw~~~ 406 (406)
++|+++
T Consensus 389 ~iw~~~ 394 (397)
T 1sq9_A 389 RWFREA 394 (397)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 999963
No 23
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-45 Score=338.37 Aligned_cols=247 Identities=27% Similarity=0.505 Sum_probs=238.4
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
..+.||..+|.+++|+|++.++++|+.|++|++||+.+++....+..|...+.+++|+|++++|++|+.|+.|++||+.+
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~ 153 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVES 153 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTT
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vw 259 (406)
++....+..|...|.+++|+|++++|++|+.|+.|++||++++..+..+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 154 ~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iw 233 (321)
T 3ow8_A 154 GKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIY 233 (321)
T ss_dssp CSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred CceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEE
Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEE
Q psy226 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339 (406)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~ 339 (406)
|+++......+.+|...|.+++|+| ++.+|++|+.|++|++||+.+++++.++.+|...|.+
T Consensus 234 d~~~~~~~~~~~~h~~~v~~~~~sp------------------~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~ 295 (321)
T 3ow8_A 234 DVQHANLAGTLSGHASWVLNVAFCP------------------DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWG 295 (321)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECT------------------TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEE
T ss_pred ECCCcceeEEEcCCCCceEEEEECC------------------CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEE
Confidence 9999998999999999999999998 4778999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCC
Q psy226 340 VTFHPGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 340 l~~s~~g~~l~sgs~d~~i~vwd~~ 364 (406)
++|+|+|++|++++.|++|+|||..
T Consensus 296 v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 296 VKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999963
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.1e-45 Score=335.61 Aligned_cols=286 Identities=22% Similarity=0.370 Sum_probs=258.1
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE---EEec--ccccCeeeEEECCCCCEEEEEeCCCcE
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE---RALH--GHLDSVQDIAFDQSGKLLVSCSADMSL 172 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~---~~~~--~h~~~V~~l~~~~~g~~l~sgs~d~~i 172 (406)
......+|..+|++++|+|++++|++++ ||.|++||+.+++.. ..+. +|...|.+++|+|++++|++++.|+.|
T Consensus 43 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 121 (337)
T 1gxr_A 43 RQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL 121 (337)
T ss_dssp EEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE
T ss_pred ccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE
Confidence 3444568999999999999999999999 999999999876532 2232 789999999999999999999999999
Q ss_pred EEEeCCCCe--EEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEE
Q psy226 173 KLWDMSTYQ--CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASC 250 (406)
Q Consensus 173 ~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~ 250 (406)
++||+.+++ ....+.+|...|.+++|+|+++++++++.|+.|++||++++..+..+.+|...+.+++|+|++++++++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 201 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTG 201 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEE
Confidence 999998876 667788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy226 251 SNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTL 330 (406)
Q Consensus 251 ~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~ 330 (406)
+.|+.|++||+++.+....+ .+...+.+++|+| ++.++++++.|+.|++||+.++.. ..+
T Consensus 202 ~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~------------------~~~~l~~~~~~~~i~~~~~~~~~~-~~~ 261 (337)
T 1gxr_A 202 GLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCP------------------TGEWLAVGMESSNVEVLHVNKPDK-YQL 261 (337)
T ss_dssp ETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECT------------------TSSEEEEEETTSCEEEEETTSSCE-EEE
T ss_pred ecCCcEEEEECCCCceEeee-cCCCceEEEEECC------------------CCCEEEEEcCCCcEEEEECCCCCe-EEE
Confidence 99999999999988776665 4677899999998 467899999999999999998775 467
Q ss_pred eCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 331 ~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
..|...|.+++|+|++++|++++.||.|++||+.+++.+... .|...|.+++|+|++++|++++.||.|++|++
T Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 889999999999999999999999999999999988877443 47788999999999999999999999999996
No 25
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=6.3e-45 Score=360.26 Aligned_cols=286 Identities=41% Similarity=0.677 Sum_probs=264.3
Q ss_pred CCceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEE
Q psy226 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW 175 (406)
Q Consensus 96 ~~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vw 175 (406)
......+.+|..+|++++|+|+++.|++++.|++|++||.. ++....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 252 ~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w 330 (577)
T 2ymu_A 252 GQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLW 330 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Confidence 34455678999999999999999999999999999999964 56778889999999999999999999999999999999
Q ss_pred eCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCe
Q psy226 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255 (406)
Q Consensus 176 d~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~ 255 (406)
|... +.+..+.+|...|.+++|+|++++|++|+.|++|++||. ++..+..+.+|...|.+++|+|+|++|++++.|+.
T Consensus 331 ~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 331 NRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 408 (577)
T ss_dssp ETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred eCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE
Confidence 9865 456788899999999999999999999999999999995 67788899999999999999999999999999999
Q ss_pred EEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc
Q psy226 256 ARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335 (406)
Q Consensus 256 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~ 335 (406)
|++||. +.+....+.+|...|.+++|+| ++.+|++++.|+.|++||. +++.+..+.+|..
T Consensus 409 v~~~~~-~~~~~~~~~~~~~~v~~~~~s~------------------d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~ 468 (577)
T 2ymu_A 409 VKLWNR-NGQLLQTLTGHSSSVWGVAFSP------------------DDQTIASASDDKTVKLWNR-NGQLLQTLTGHSS 468 (577)
T ss_dssp EEEECT-TCCEEEEEECCSSCEEEEEECT------------------TSSEEEEEETTSEEEEEET-TSCEEEEEECCSS
T ss_pred EEEEeC-CCCEEEEecCCCCCeEEEEECC------------------CCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCC
Confidence 999996 4567788899999999999998 4678999999999999996 6788889999999
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.|++++|+|++++|++++.|+.|++||. +++.++++.+|...|++++|+|++++||+|+.||.|++||.
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 9999999999999999999999999995 67888999999999999999999999999999999999985
No 26
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1e-45 Score=351.05 Aligned_cols=248 Identities=34% Similarity=0.611 Sum_probs=237.3
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
...+.+|.++|++++|+|++++|++|+.||+|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~ 222 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ 222 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCC---------------
Q psy226 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD--------------- 243 (406)
Q Consensus 179 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--------------- 243 (406)
++.++..+.+|...|.++.|+|++.++++|+.|++|++||+.++.+...+.+|...|.+++|+|+
T Consensus 223 ~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 302 (410)
T 1vyh_C 223 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETK 302 (410)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC--
T ss_pred CCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999996
Q ss_pred -----CCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEE
Q psy226 244 -----GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKL 318 (406)
Q Consensus 244 -----~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~l 318 (406)
|.+|++|+.|++|++||++++.....+.+|...|.++.|+| ++.+|++|+.|+.|++
T Consensus 303 ~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~------------------~g~~l~s~s~D~~i~v 364 (410)
T 1vyh_C 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS------------------GGKFILSCADDKTLRV 364 (410)
T ss_dssp -----CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS------------------SSSCEEEEETTTEEEE
T ss_pred ccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcC------------------CCCEEEEEeCCCeEEE
Confidence 67899999999999999999999999999999999999998 4778999999999999
Q ss_pred EECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy226 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 319 wd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~ 364 (406)
||+.+++++..+.+|...|++++|+|++.+|++||.||+|+||+.+
T Consensus 365 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 365 WDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp ECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9999999999999999999999999999999999999999999863
No 27
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-45 Score=344.39 Aligned_cols=285 Identities=18% Similarity=0.227 Sum_probs=254.0
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--EEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE--YERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
+..|.++|++++|+|++++|++|+.||.|++||..+++ ....+.+|...|.+++|+|++++|++|+.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 45699999999999999999999999999999999987 7788899999999999999999999999999999999988
Q ss_pred CeEEEE--EecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe----EEEEeecCCccEEEEEECCCCCEEEEEeCC
Q psy226 180 YQCLKT--MQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY----CVKTLTGHREWVRQIKVSPDGTLLASCSND 253 (406)
Q Consensus 180 ~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d 253 (406)
++.... +..|...|.+++|+|++++|++++.|+.|++||+.++. ......+|...|.+++|+|++++|++++.|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 875444 36788999999999999999999999999999998875 233346789999999999999999999999
Q ss_pred CeEEEEeCC------------------CccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCc
Q psy226 254 HTARVWSLA------------------TKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKT 315 (406)
Q Consensus 254 ~~v~vwd~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 315 (406)
+.|++||+. .......+..|...|.++.|+| ++.+|++++.|+.
T Consensus 164 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------------~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA------------------NGSRVAWVSHDST 225 (372)
T ss_dssp SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS------------------SSSEEEEEETTTE
T ss_pred CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC------------------CCCEEEEEeCCCE
Confidence 999999953 5667777889999999999998 4678999999999
Q ss_pred EEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--Cc--------------------------
Q psy226 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN--KR-------------------------- 367 (406)
Q Consensus 316 i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~--~~-------------------------- 367 (406)
|++||+++++++..+..|...|.+++|+|++++|++| .|+.|++||+.+ +.
T Consensus 226 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (372)
T 1k8k_C 226 VCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 304 (372)
T ss_dssp EEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHH
T ss_pred EEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhh
Confidence 9999999999999999999999999999999988887 899999999977 31
Q ss_pred ------cc------eee-ccccceEEEEEEe-CCC---CEEEEeeCCCeEEEeec
Q psy226 368 ------NM------KTL-EAHSHFVTSLDFH-RAH---PYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 368 ------~~------~~l-~~h~~~v~~l~~~-~~~---~~l~sgs~Dg~v~iw~~ 405 (406)
.. ..+ .+|...|++++|+ +++ .+|+||+.||.|++|++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 305 LDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 359 (372)
T ss_dssp CCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred cccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEe
Confidence 00 233 4899999999977 666 89999999999999996
No 28
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.6e-46 Score=348.25 Aligned_cols=286 Identities=22% Similarity=0.383 Sum_probs=253.4
Q ss_pred EeccCCCCeEEEEEcCC----CCEEEEEeCCCcEEEEEcCCCcEEEEecc-----cccCeeeEEECCC----CCEEEEEe
Q psy226 101 ALSGHRSPVIKVIFHPV----FSLMASCSEDATIRLWDYETGEYERALHG-----HLDSVQDIAFDQS----GKLLVSCS 167 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~----~~~latgs~dg~v~vwd~~~~~~~~~~~~-----h~~~V~~l~~~~~----g~~l~sgs 167 (406)
...+|.++|++++|+|+ ...+++++.++.|++||+.+++....+.. |...|.+++|+|+ |.+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 45689999999999994 55677777778999999998877666654 4577999999998 67999999
Q ss_pred CCCcEEEEeCCCCeEEEEEecCCcceEEEEEec-CCCEEEEEeCCCcEEEEEcCCCeEEEEe---ecCCccEEEEEECCC
Q psy226 168 ADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATGYCVKTL---TGHREWVRQIKVSPD 243 (406)
Q Consensus 168 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l~~~~~ 243 (406)
.|+.|++||+.+++.+..+.+|...|.+++|+| ++++|++|+.|++|++||+.++..+..+ .+|...|.+++|+|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 999999999999999999999999999999999 8999999999999999999999998888 689999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCccceeEEe----------------------------cCCceEEEEEeCCCCCcccccccc
Q psy226 244 GTLLASCSNDHTARVWSLATKETKAELR----------------------------GHDHTVECVAWAPGVASESISEAA 295 (406)
Q Consensus 244 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~~~~~~~~ 295 (406)
+.+|++++.|+.|++||+++.+....+. .|...|.++.|.
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------ 240 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL------------ 240 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE------------
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc------------
Confidence 9999999999999999998765543333 277888888875
Q ss_pred CCCCCCCCCCEEEEEeCCCcEEEEECCCCe--------------EEEEEeCCCcCEEEEEEcCC--CCEEEEEeCCCeEE
Q psy226 296 GRPPGQGGGPYLATGSRDKTIKLWDVGSGS--------------LLFTLIGHDNWVRGVTFHPG--GKYLVSCGDDKTLR 359 (406)
Q Consensus 296 ~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~--------------~~~~~~~h~~~v~~l~~s~~--g~~l~sgs~d~~i~ 359 (406)
+.++++++.|+.|++||++++. .+..+.+|...|.+++|+|+ +++|++|+.||.|+
T Consensus 241 --------~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~ 312 (366)
T 3k26_A 241 --------GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLY 312 (366)
T ss_dssp --------TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEE
T ss_pred --------CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEE
Confidence 3489999999999999988764 47888999999999999999 99999999999999
Q ss_pred EEeCCCCccce----eeccc--cceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 360 VWDTANKRNMK----TLEAH--SHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 360 vwd~~~~~~~~----~l~~h--~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+||+.+++... .+..| ...|++++|+|++++|++|+.||.|++||+.
T Consensus 313 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999876544 67777 6899999999999999999999999999973
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.5e-45 Score=346.45 Aligned_cols=285 Identities=18% Similarity=0.266 Sum_probs=248.2
Q ss_pred eEEeccCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCcEEEEec--ccccCeeeEEECC-CCCEEEEEeCCCcEEE
Q psy226 99 KFALSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDYETGEYERALH--GHLDSVQDIAFDQ-SGKLLVSCSADMSLKL 174 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~-~~latgs~dg~v~vwd~~~~~~~~~~~--~h~~~V~~l~~~~-~g~~l~sgs~d~~i~v 174 (406)
...+.+|..+|++++|+|++ ++||+|+.||+|++||+.+++....+. +|...|.+++|+| ++.+|++|+.|+.|++
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 34678999999999999999 999999999999999999988777665 6999999999999 7899999999999999
Q ss_pred EeCCCCeEEEEEecC---CcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCC-EEEEE
Q psy226 175 WDMSTYQCLKTMQGH---DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASC 250 (406)
Q Consensus 175 wd~~~~~~~~~~~~h---~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~ 250 (406)
||+.+ ..+..+..+ ...|.+++|+|++++|++|+.|+.|++||+ ++..+..+.+|...|.+++|+|++. ++++|
T Consensus 146 wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 146 RDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp EETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEE
T ss_pred EECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEE
Confidence 99986 555566544 478999999999999999999999999999 5778899999999999999999999 99999
Q ss_pred eCCCeEEEEeCCC----ccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeE
Q psy226 251 SNDHTARVWSLAT----KETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSL 326 (406)
Q Consensus 251 ~~d~~v~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 326 (406)
+.|+.|++||+++ ......+ +|...|.+++|+|. ++.+|++++.|+.|++||++++..
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~-----------------~~~~l~~~~~d~~i~iwd~~~~~~ 285 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPT-----------------DSTKLLTTDQRNEIRVYSSYDWSK 285 (383)
T ss_dssp ETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTT-----------------TSCEEEEEESSSEEEEEETTBTTS
T ss_pred eCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCC-----------------CCCEEEEEcCCCcEEEEECCCCcc
Confidence 9999999999987 4444444 79999999999982 367899999999999999998877
Q ss_pred EEEEeCCC-----------------cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc--ccceEEEEEEeCC
Q psy226 327 LFTLIGHD-----------------NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA--HSHFVTSLDFHRA 387 (406)
Q Consensus 327 ~~~~~~h~-----------------~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~--h~~~v~~l~~~~~ 387 (406)
+..+.+|. ..+..++|+|+|++ +|+.|+.|++||+.+++.+.++.+ |...+.+++|+|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~ 363 (383)
T 3ei3_B 286 PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPT 363 (383)
T ss_dssp CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTT
T ss_pred ccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecC
Confidence 66666543 23444666777766 778999999999999999999976 5677888899999
Q ss_pred CCEEEEeeCCCeEEEeecC
Q psy226 388 HPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 388 ~~~l~sgs~Dg~v~iw~~~ 406 (406)
+++|++|+ ||.|++||++
T Consensus 364 g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 364 GDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp SSEEEEEE-TTEEEEEECC
T ss_pred ccEEEEec-CCcEEEEecC
Confidence 99999997 9999999974
No 30
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-44 Score=330.29 Aligned_cols=282 Identities=28% Similarity=0.424 Sum_probs=257.5
Q ss_pred CceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 97 ~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
.....+.+|.++|++++| |++.+|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++|+.|+.|++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 345678999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC---CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECC-CCCEEEEEeC
Q psy226 177 MST---YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP-DGTLLASCSN 252 (406)
Q Consensus 177 ~~~---~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~ 252 (406)
+.. .+.+..+.+|...|.+++| +++++++++.|+.|++|| .+.....+..|...+.++.+.| ++.++++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 864 3567788899999999999 577999999999999999 6778888999999999999988 9999999999
Q ss_pred CCeEEEEeCCCccceeEEec-CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe
Q psy226 253 DHTARVWSLATKETKAELRG-HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI 331 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~ 331 (406)
|+.|++||. ......+.. |...+.+++|+|+ +. +++++.|+.|++||+++++++..+.
T Consensus 164 d~~i~i~d~--~~~~~~~~~~~~~~i~~~~~~~~------------------~~-~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 164 DKTIKLWQN--DKVIKTFSGIHNDVVRHLAVVDD------------------GH-FISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp TSCEEEEET--TEEEEEECSSCSSCEEEEEEEET------------------TE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEec--CceEEEEeccCcccEEEEEEcCC------------------Ce-EEEccCCCeEEEEECCchhhhhhhh
Confidence 999999993 445566666 8899999999873 44 8999999999999999999999999
Q ss_pred CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 332 ~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+|...|++++|+|++ .|++++.||.|++||+.+++.+..+..|...|.+++|+|+++ +++++.||.|++||++
T Consensus 223 ~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 223 GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESC
T ss_pred cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCC
Confidence 999999999999999 588999999999999999999999999999999999999998 5569999999999974
No 31
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-45 Score=351.44 Aligned_cols=298 Identities=11% Similarity=0.189 Sum_probs=255.8
Q ss_pred cCCCCCCceEEe-ccCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCC---Cc---EEEEecccccCeeeEEECCCCCE
Q psy226 91 EWIPRAPEKFAL-SGHRSPVIKVIFHP-VFSLMASCSEDATIRLWDYET---GE---YERALHGHLDSVQDIAFDQSGKL 162 (406)
Q Consensus 91 ~~~~~~~~~~~l-~~h~~~V~~v~~~p-~~~~latgs~dg~v~vwd~~~---~~---~~~~~~~h~~~V~~l~~~~~g~~ 162 (406)
.|.+.......+ .+|.++|++++|+| ++.+||+|+.||+|+|||+.+ +. ....+ +|...|.+++|+|++++
T Consensus 47 ~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 47 MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSE
T ss_pred cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCE
Confidence 566766667777 89999999999999 999999999999999999876 43 12222 58999999999999999
Q ss_pred EEEEeCCCcEEEEeCC---CCeEEEEEec------------CCcceEEEE--EecCCCEEEEEeCCCcEEEEEcCCCeEE
Q psy226 163 LVSCSADMSLKLWDMS---TYQCLKTMQG------------HDHNVTGVA--FLPNSDFVLSASRDKTIKMWEVATGYCV 225 (406)
Q Consensus 163 l~sgs~d~~i~vwd~~---~~~~~~~~~~------------h~~~v~~~~--~~p~~~~l~s~s~d~~i~iwd~~~~~~~ 225 (406)
|++|+.|++|++||+. +++....+.+ +...+.++. ++|++.+|++|+.|++|++||++++.++
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 9999999999999994 4544444332 344566666 4577899999999999999999999999
Q ss_pred EEeec--CCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEe-cCCceEEEEEeCCCCCccccccccCCCCCCC
Q psy226 226 KTLTG--HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR-GHDHTVECVAWAPGVASESISEAAGRPPGQG 302 (406)
Q Consensus 226 ~~~~~--~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (406)
..+.+ |...|.+++|+|++.+|++|+.||.|++||+++...+..+. .|..+|.++.|.|... .
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s--------------~ 271 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYG--------------K 271 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTC--------------T
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccC--------------C
Confidence 99988 89999999999999999999999999999999988888776 7888999999987432 2
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC--------------------------CcCEEEEEEcCCCCEEEEEeCCC
Q psy226 303 GGPYLATGSRDKTIKLWDVGSGSLLFTLIGH--------------------------DNWVRGVTFHPGGKYLVSCGDDK 356 (406)
Q Consensus 303 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h--------------------------~~~v~~l~~s~~g~~l~sgs~d~ 356 (406)
++.+|++|+.|+.|++||+++++++..+.+| ...|++++|+ ++++|++|+.|+
T Consensus 272 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~ 350 (437)
T 3gre_A 272 NSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATS 350 (437)
T ss_dssp TEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGT
T ss_pred CccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCC
Confidence 4679999999999999999999988887754 4557888998 779999999999
Q ss_pred eEEEEeCCCCccceeecc-------------------------------------ccceEEEEEEeCC--CCEEEEeeCC
Q psy226 357 TLRVWDTANKRNMKTLEA-------------------------------------HSHFVTSLDFHRA--HPYVVTGSVD 397 (406)
Q Consensus 357 ~i~vwd~~~~~~~~~l~~-------------------------------------h~~~v~~l~~~~~--~~~l~sgs~D 397 (406)
.|++||+.+++....+.+ |...|++++|+++ +.+|+||+.|
T Consensus 351 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d 430 (437)
T 3gre_A 351 SIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS 430 (437)
T ss_dssp EEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT
T ss_pred eEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC
Confidence 999999999888777765 7889999999998 7899999999
Q ss_pred CeEEEee
Q psy226 398 KTVKVWE 404 (406)
Q Consensus 398 g~v~iw~ 404 (406)
|.|+||+
T Consensus 431 G~I~iw~ 437 (437)
T 3gre_A 431 GLIGIFQ 437 (437)
T ss_dssp SCEEEEC
T ss_pred ceEEEeC
Confidence 9999995
No 32
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-45 Score=345.59 Aligned_cols=281 Identities=16% Similarity=0.272 Sum_probs=262.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEE
Q psy226 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184 (406)
Q Consensus 105 h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~ 184 (406)
|.++|++++|+|++.+|++|+.||.|++|| .+++....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 788999999999999999999999999999 6778888899999999999999999999999999999999999999998
Q ss_pred EEecCCcc---------------eEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEE
Q psy226 185 TMQGHDHN---------------VTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLAS 249 (406)
Q Consensus 185 ~~~~h~~~---------------v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 249 (406)
.+..+... +.+++|+|+ ..+++++.|+.|++||+.++..+..+.+|...|.+++|+|++++|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp EECCC---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE
Confidence 88888776 999999987 46889999999999999999999999999999999999999999999
Q ss_pred EeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEE
Q psy226 250 CSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFT 329 (406)
Q Consensus 250 ~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~ 329 (406)
++.|+.|++||+.+.+....+..|...|.++.|+|+ + ++++++.|+.|++||+++++.+..
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~------------------~-~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGD------------------D-KVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETT------------------T-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred EcCCCEEEEEECCCCccceEecCCCccEEEEEECCC------------------C-EEEEEeCCCcEEEEECCCCcEeEe
Confidence 999999999999999999999999999999999983 4 899999999999999999999999
Q ss_pred EeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--------------------cceeeccccc--eEEEEEEeCC
Q psy226 330 LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR--------------------NMKTLEAHSH--FVTSLDFHRA 387 (406)
Q Consensus 330 ~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~--------------------~~~~l~~h~~--~v~~l~~~~~ 387 (406)
+..|...|.+++|+|++++|++++.||.|++||+.+++ .+..+..|.. .|++++|+|+
T Consensus 326 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 405 (425)
T 1r5m_A 326 SIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCA 405 (425)
T ss_dssp EECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTT
T ss_pred cccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCC
Confidence 99999999999999999999999999999999998887 7888888866 9999999999
Q ss_pred CCEEEEeeCCCeEEEeecC
Q psy226 388 HPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 388 ~~~l~sgs~Dg~v~iw~~~ 406 (406)
+++|++|+.||.|++|+++
T Consensus 406 ~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 406 GNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp SSEEEEEESSSCCEEEECC
T ss_pred CceEEEEecCceEEEEeec
Confidence 9999999999999999974
No 33
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1e-43 Score=338.39 Aligned_cols=294 Identities=27% Similarity=0.461 Sum_probs=254.2
Q ss_pred CcCCCCCCceEEec-cC--CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec--ccccCeeeEEECCCCCEEE
Q psy226 90 TEWIPRAPEKFALS-GH--RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--GHLDSVQDIAFDQSGKLLV 164 (406)
Q Consensus 90 ~~~~~~~~~~~~l~-~h--~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~g~~l~ 164 (406)
...+|..|.+..-. +- .-.++.|+|+++ ++||+|. |++|+|||..+|+....+. +|...|++|+|+|+|++|+
T Consensus 86 ~r~i~~~p~~~l~ap~~~~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~la 163 (420)
T 4gga_A 86 CRYIPSLPDRILDAPEIRNDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA 163 (420)
T ss_dssp CCCCCSSCSEEEECTTCCCCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE
T ss_pred CcccCCCCceEEECCCCcccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEE
Confidence 34566666554211 11 124778999975 5888776 9999999999999877654 6778899999999999999
Q ss_pred EEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC-eEEEEeecCCccEEEEEECCC
Q psy226 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG-YCVKTLTGHREWVRQIKVSPD 243 (406)
Q Consensus 165 sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~ 243 (406)
+|+.|++|++||+.+++++..+.+|...+.+++++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.++|+
T Consensus 164 sgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~ 241 (420)
T 4gga_A 164 VGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD 241 (420)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT
T ss_pred EEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCC
Confidence 99999999999999999999999999999988775 679999999999999998764 566788999999999999999
Q ss_pred CCEEEEEeCCCeEEEEeCCCcc----ceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE--EeCCCcEE
Q psy226 244 GTLLASCSNDHTARVWSLATKE----TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT--GSRDKTIK 317 (406)
Q Consensus 244 ~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~i~ 317 (406)
+.++++++.|+.+++|+..+++ .......|...|.+++|+|. ...++++ |+.|++|+
T Consensus 242 g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~-----------------~~~~la~~~gs~D~~I~ 304 (420)
T 4gga_A 242 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW-----------------QSNVLATGGGTSDRHIR 304 (420)
T ss_dssp SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTT-----------------CTTEEEEEECTTTCEEE
T ss_pred CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCC-----------------cccEEEEEeecCCCEEE
Confidence 9999999999999999998654 34567789999999999985 2345554 45899999
Q ss_pred EEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEee
Q psy226 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG--DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395 (406)
Q Consensus 318 lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs--~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs 395 (406)
+||+.+++++..+..|. .+.++.|+|+++.+++++ .|+.|+|||+.+++.+.++.+|.+.|++|+|+|++++|||||
T Consensus 305 iwd~~t~~~~~~~~~~~-~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 305 IWNVCSGACLSAVDAHS-QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp EEETTTTEEEEEEECSS-CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EEeCCccccceeecccc-ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 99999999998887664 588999999999998765 799999999999999999999999999999999999999999
Q ss_pred CCCeEEEeec
Q psy226 396 VDKTVKVWEC 405 (406)
Q Consensus 396 ~Dg~v~iw~~ 405 (406)
.||+|+|||+
T Consensus 384 ~D~tvriWdv 393 (420)
T 4gga_A 384 ADETLRLWRC 393 (420)
T ss_dssp TTTEEEEECC
T ss_pred cCCeEEEEEC
Confidence 9999999997
No 34
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=342.34 Aligned_cols=292 Identities=13% Similarity=0.211 Sum_probs=249.5
Q ss_pred eEEeccCCCCeEEEEEcCCCC-EEEEEeC---CCcEEEEEcCCCcEEEEe-cccccCeeeEEECCC---CCEEEEEeCCC
Q psy226 99 KFALSGHRSPVIKVIFHPVFS-LMASCSE---DATIRLWDYETGEYERAL-HGHLDSVQDIAFDQS---GKLLVSCSADM 170 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~-~latgs~---dg~v~vwd~~~~~~~~~~-~~h~~~V~~l~~~~~---g~~l~sgs~d~ 170 (406)
...+.+|..+|++++|+|++. ++++|+. ||.|++||+.+++..... .+|...|.+++|+|+ |.+|++|+.|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 345678999999999999996 4556666 999999999998866543 379999999999998 69999999999
Q ss_pred cEEEEeCCCCe-EEEEEecCCcceEEEEE------ecCCCEEEEEeCCCcEEEEEcCCCe-EEEEeecCCc----cEEEE
Q psy226 171 SLKLWDMSTYQ-CLKTMQGHDHNVTGVAF------LPNSDFVLSASRDKTIKMWEVATGY-CVKTLTGHRE----WVRQI 238 (406)
Q Consensus 171 ~i~vwd~~~~~-~~~~~~~h~~~v~~~~~------~p~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~~~~~----~v~~l 238 (406)
.|++||+.+++ .+..+.+|...|.++.| +|++++|++++.|++|++||+.++. .+..+..|.. .+.++
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999999887 78889999999999965 6789999999999999999999886 6777766554 78888
Q ss_pred E----ECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC
Q psy226 239 K----VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK 314 (406)
Q Consensus 239 ~----~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 314 (406)
+ |+|++.++++++.|+.|++||+++.... ....|...|.++.|+|.. .++.++++++.|+
T Consensus 171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~---------------~~~~~l~~~~~dg 234 (357)
T 3i2n_A 171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR-WETNIKNGVCSLEFDRKD---------------ISMNKLVATSLEG 234 (357)
T ss_dssp EEECCCC-CCCEEEEEETTSEEEEEETTTTEEE-EEEECSSCEEEEEESCSS---------------SSCCEEEEEESTT
T ss_pred EEEeccCCCCCEEEEEccCCeEEEEECccCcee-eecCCCCceEEEEcCCCC---------------CCCCEEEEECCCC
Confidence 8 7899999999999999999999987764 446788999999999821 0356899999999
Q ss_pred cEEEEECCCCeEEEE-----EeCCCcCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCC-------------------ccc
Q psy226 315 TIKLWDVGSGSLLFT-----LIGHDNWVRGVTFHPGGK-YLVSCGDDKTLRVWDTANK-------------------RNM 369 (406)
Q Consensus 315 ~i~lwd~~~~~~~~~-----~~~h~~~v~~l~~s~~g~-~l~sgs~d~~i~vwd~~~~-------------------~~~ 369 (406)
.|++||+++++.+.. +.+|...|.+++|+|+++ +|++|+.||.|++||+.++ +.+
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL 314 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence 999999987654433 348999999999999998 8999999999999998753 346
Q ss_pred eeeccccceEEEEEEeCCCCEEE-EeeCCCeEEEeecC
Q psy226 370 KTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406 (406)
Q Consensus 370 ~~l~~h~~~v~~l~~~~~~~~l~-sgs~Dg~v~iw~~~ 406 (406)
..+..|...|++++|+|++++|+ +|+.||.|++||+.
T Consensus 315 ~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 315 QNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred eccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 67788999999999999999998 89999999999974
No 35
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-44 Score=333.70 Aligned_cols=246 Identities=21% Similarity=0.298 Sum_probs=216.8
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE----EecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER----ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 103 ~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~----~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
..|..+|++++|+|++ .|++|+.||+|+|||+.+++... .+.+|.+.|++|+|+|+|++|++|+.|++|++||+.
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3467889999999984 78899999999999999886433 345899999999999999999999999999999999
Q ss_pred CCeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEEEee--cCCccEEEEEECCC-CCEEEEEeCCC
Q psy226 179 TYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTLT--GHREWVRQIKVSPD-GTLLASCSNDH 254 (406)
Q Consensus 179 ~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~-~~~l~s~~~d~ 254 (406)
+++++..+.+|...|.+++|+|++. +|++|+.|++|++||++++++...+. .|...+.+++|+|+ +++|++|+.|+
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 9999999999999999999999885 78999999999999999998887764 45567899999995 57889999999
Q ss_pred eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC
Q psy226 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~ 334 (406)
+|++||+++++.+..+.+|...|.+++|+|+ +..+|++|+.|++|+|||+.+++++ .+.+|.
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~-----------------g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~ 299 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPH-----------------SVPFLASLSEDCSLAVLDSSLSELF-RSQAHR 299 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSS-----------------SSCCEEEEETTSCEEEECTTCCEEE-EECCCS
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccC-----------------CCeEEEEEeCCCeEEEEECCCCcEE-EEcCCC
Confidence 9999999999999999999999999999984 2357999999999999999988765 678999
Q ss_pred cCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc
Q psy226 335 NWVRGVTFHPGGK-YLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 335 ~~v~~l~~s~~g~-~l~sgs~d~~i~vwd~~~~~ 367 (406)
+.|++++|+|+++ +|++||.|++|++|++.+..
T Consensus 300 ~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 300 DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 9999999999986 56799999999999997653
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-46 Score=352.65 Aligned_cols=284 Identities=17% Similarity=0.209 Sum_probs=237.3
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG--EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~--~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
+..|.++|++++|+|++++||+|+.||.|++||+.++ +....+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 4457789999999999999999999999999999998 67778889999999999999999999999999999999988
Q ss_pred Ce---EEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe---EEEEeec-CCccEEEEEECCCCCEEEEEeC
Q psy226 180 YQ---CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY---CVKTLTG-HREWVRQIKVSPDGTLLASCSN 252 (406)
Q Consensus 180 ~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~ 252 (406)
++ ....+.+|...|.+++|+|++++|++|+.|++|++||+.++. ....+.+ |...|.+++|+|++++|++++.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 76 667788899999999999999999999999999999999876 4677777 9999999999999999999999
Q ss_pred CCeEEEEeCCC------------------ccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC
Q psy226 253 DHTARVWSLAT------------------KETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK 314 (406)
Q Consensus 253 d~~v~vwd~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 314 (406)
|+.|++||+.. ......+ +|...|.+++|+| ++.+|++++.|+
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp------------------~~~~l~~~~~d~ 227 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP------------------SGNALAYAGHDS 227 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT------------------TSSCEEEEETTT
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC------------------CCCEEEEEeCCC
Confidence 99999999852 3344455 8999999999998 467899999999
Q ss_pred cEEEEECCCCeE----EEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CC-ccc-------------------
Q psy226 315 TIKLWDVGSGSL----LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NK-RNM------------------- 369 (406)
Q Consensus 315 ~i~lwd~~~~~~----~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~-~~-~~~------------------- 369 (406)
.|++||+.++.. +..+.+|...|.+++|+|+|++|++|+.|+.+ +|+.. ++ +..
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTG 306 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBC
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccc
Confidence 999999999876 77889999999999999999999999877766 66554 11 000
Q ss_pred ---------------ee----------------eccccceEEEEEEeCCCC----EEEEeeCCCeEEEeec
Q psy226 370 ---------------KT----------------LEAHSHFVTSLDFHRAHP----YVVTGSVDKTVKVWEC 405 (406)
Q Consensus 370 ---------------~~----------------l~~h~~~v~~l~~~~~~~----~l~sgs~Dg~v~iw~~ 405 (406)
.. ...|...|+++++.+... .|+|||.||.|++||+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 307 EGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp CCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 00 113889999999766543 6999999999999985
No 37
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-44 Score=341.87 Aligned_cols=283 Identities=16% Similarity=0.283 Sum_probs=256.5
Q ss_pred eccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEc----CCCc------EEEEecc----------cccCeeeEEECCCC
Q psy226 102 LSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDY----ETGE------YERALHG----------HLDSVQDIAFDQSG 160 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~-~latgs~dg~v~vwd~----~~~~------~~~~~~~----------h~~~V~~l~~~~~g 160 (406)
...|.++|++++|+|+++ +||+|+.||.|++||+ .+++ ....+.. |.+.|++++|+|++
T Consensus 41 ~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 120 (425)
T 1r5m_A 41 EIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG 120 (425)
T ss_dssp EEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS
T ss_pred eeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC
Confidence 445779999999999999 9999999999999999 8887 4444443 67899999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCcc------
Q psy226 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW------ 234 (406)
Q Consensus 161 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~------ 234 (406)
++|++|+.|+.|++|| .+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++..+..+..+...
T Consensus 121 ~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 121 NSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINA 199 (425)
T ss_dssp SEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------
T ss_pred CEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceee
Confidence 9999999999999999 667888899999999999999999999999999999999999999999998888776
Q ss_pred ---------EEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCC
Q psy226 235 ---------VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGP 305 (406)
Q Consensus 235 ---------v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
+.+++|+|++ .+++++.|+.|++||+.+......+..|...|.+++|+| ++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~------------------~~~ 260 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFND------------------TNK 260 (425)
T ss_dssp ------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEET------------------TTT
T ss_pred ccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECC------------------CCC
Confidence 8999999875 588999999999999999988889999999999999998 467
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEe
Q psy226 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385 (406)
Q Consensus 306 ~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~ 385 (406)
+|++++.|+.|++||+++++.+..+.+|...|.+++|+|++ +|++++.|+.|++||+.+++.+..+..|...|.+++|+
T Consensus 261 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 261 LLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp EEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEc
Confidence 89999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCCCEEEEeeCCCeEEEeec
Q psy226 386 RAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 386 ~~~~~l~sgs~Dg~v~iw~~ 405 (406)
|++++|++|+.||.|++||+
T Consensus 340 ~~~~~l~~~~~dg~i~i~~~ 359 (425)
T 1r5m_A 340 QDGQKYAVAFMDGQVNVYDL 359 (425)
T ss_dssp TTSSEEEEEETTSCEEEEEC
T ss_pred CCCCEEEEEECCCeEEEEEC
Confidence 99999999999999999996
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-45 Score=349.57 Aligned_cols=286 Identities=16% Similarity=0.255 Sum_probs=256.4
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC----CcEEEEecccccCeeeEEECCC-CCEEEEEeCCCcEEEEeC
Q psy226 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERALHGHLDSVQDIAFDQS-GKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 103 ~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~----~~~~~~~~~h~~~V~~l~~~~~-g~~l~sgs~d~~i~vwd~ 177 (406)
..|..+|++++|+|++.+|++|+.||.|++||+.+ .+....+.+|...|.+++|+|+ +.+|++|+.|+.|++||+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 36889999999999999999999999999999988 4578888999999999999998 899999999999999999
Q ss_pred CCCe------EE---EEEecCCcceEEEEEecC-CCEEEEEeCCCcEEEEEcCCCeEEEEeecC------CccEEEEEEC
Q psy226 178 STYQ------CL---KTMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVATGYCVKTLTGH------REWVRQIKVS 241 (406)
Q Consensus 178 ~~~~------~~---~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~------~~~v~~l~~~ 241 (406)
.+++ .. ..+.+|...|.+++|+|+ +.++++++.|+.|++||++++..+..+..| ...|.+++|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 8775 22 233678999999999999 789999999999999999999999888876 7889999999
Q ss_pred CCC-CEEEEEeCCC---eEEEEeCCCc-cceeEEe-cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCc
Q psy226 242 PDG-TLLASCSNDH---TARVWSLATK-ETKAELR-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKT 315 (406)
Q Consensus 242 ~~~-~~l~s~~~d~---~v~vwd~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 315 (406)
|++ .++++++.|+ .|++||+++. .....+. +|...|.+++|+|. ++.+|++++.|+.
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~-----------------~~~~l~s~~~dg~ 286 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQ-----------------DEHLLLSSGRDNT 286 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSS-----------------CSSCEEEEESSSE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCC-----------------CCCeEEEEeCCCC
Confidence 997 6899999999 9999999986 5667777 89999999999982 3678999999999
Q ss_pred EEEEECCCCeEEEEEeCCCcCEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCccceeec---------------------
Q psy226 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG-KYLVSCGDDKTLRVWDTANKRNMKTLE--------------------- 373 (406)
Q Consensus 316 i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g-~~l~sgs~d~~i~vwd~~~~~~~~~l~--------------------- 373 (406)
|++||+++++++..+.+|...|.+++|+|++ .+|++++.|+.|++||+.+........
T Consensus 287 v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (416)
T 2pm9_A 287 VLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREE 366 (416)
T ss_dssp EEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------
T ss_pred EEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccc
Confidence 9999999999999999999999999999999 899999999999999998765433221
Q ss_pred --------------cccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 374 --------------AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 374 --------------~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.|...+.+++|+|+|++||+|+.||+|+||++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 367 SKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred cccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 16667889999999999999999999999996
No 39
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-43 Score=335.52 Aligned_cols=287 Identities=22% Similarity=0.350 Sum_probs=254.6
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc-cccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHG-HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
+...+|...+.+..+++++..+++++.||.|++||..+++....+.. |...|.+++|+|++++|++|+.||.|++||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~ 164 (401)
T 4aez_A 85 LDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVE 164 (401)
T ss_dssp EECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECc
Confidence 44568877655544444456788899999999999999998877765 88999999999999999999999999999999
Q ss_pred CCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcC-CCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Q psy226 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA-TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257 (406)
Q Consensus 179 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~ 257 (406)
+++.+..+.+|...|.+++|+ ++++++|+.|+.|++||++ .+..+..+.+|...|.+++|+|++.+|++|+.|+.|+
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEE
Confidence 999999999999999999994 5799999999999999998 5677888999999999999999999999999999999
Q ss_pred EEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe--CCCcEEEEECCCCeEEEEEeCCCc
Q psy226 258 VWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS--RDKTIKLWDVGSGSLLFTLIGHDN 335 (406)
Q Consensus 258 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~d~~i~lwd~~~~~~~~~~~~h~~ 335 (406)
+||+++......+..|...|.+++|+|. +..++++|+ .|+.|++||+.+++++..+. |..
T Consensus 243 iwd~~~~~~~~~~~~~~~~v~~~~~~p~-----------------~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~ 304 (401)
T 4aez_A 243 IWDARSSIPKFTKTNHNAAVKAVAWCPW-----------------QSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGS 304 (401)
T ss_dssp EEETTCSSEEEEECCCSSCCCEEEECTT-----------------STTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSS
T ss_pred EccCCCCCccEEecCCcceEEEEEECCC-----------------CCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCC
Confidence 9999999888899999999999999984 345677765 79999999999999988886 567
Q ss_pred CEEEEEEcCCCCEEEEE--eCCCeEEEEeCCCCccce--eeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 336 WVRGVTFHPGGKYLVSC--GDDKTLRVWDTANKRNMK--TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sg--s~d~~i~vwd~~~~~~~~--~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
.|.+++|+|++++|+++ +.||.|++||+.+++... .+.+|...|.+++|+|++++|++|+.||.|++|++.
T Consensus 305 ~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 305 QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 89999999999999994 489999999998865443 467899999999999999999999999999999973
No 40
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-44 Score=345.78 Aligned_cols=286 Identities=19% Similarity=0.286 Sum_probs=240.1
Q ss_pred EeccCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEE--EEecccccCeeeEEECC-CCCEEEEEeCCCcEEEEe
Q psy226 101 ALSGHRSPVIKVIFHPV-FSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQ-SGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~-~~~latgs~dg~v~vwd~~~~~~~--~~~~~h~~~V~~l~~~~-~g~~l~sgs~d~~i~vwd 176 (406)
...+|...|+||+|||. ..+||+|+.||+|+|||+.+++.. ..+.+|.+.|++|+|+| ++.+|++|+.|++|++||
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd 193 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQD 193 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEee
Confidence 46789999999999995 679999999999999999887643 34568999999999998 689999999999999999
Q ss_pred CCCCeEEEEEecC--CcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCC-EEEEEeCC
Q psy226 177 MSTYQCLKTMQGH--DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSND 253 (406)
Q Consensus 177 ~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d 253 (406)
+.+.........+ ...+.+++|+|++.+|++|+.||+|++||++ +..+..+.+|...|.+++|+|++. +|++|+.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 9876543333333 3457899999999999999999999999986 456778889999999999999876 78899999
Q ss_pred CeEEEEeCCCcccee---EEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy226 254 HTARVWSLATKETKA---ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTL 330 (406)
Q Consensus 254 ~~v~vwd~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~ 330 (406)
++|++||+++..... ...+|...|.+++|+| ++.+|++++.|+.|++||+.++.+...+
T Consensus 273 ~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp------------------dg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 273 QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP------------------DGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT------------------TSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred ceeeEEecccccccceEEEeeeccccccceeECC------------------CCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 999999998765443 3357899999999998 4789999999999999999999888887
Q ss_pred eCCCc------CEEEEEEcCCCCEEEEEe------------CCCeEEEEeCCCCccceee-ccccceEEEE-EEeCCCCE
Q psy226 331 IGHDN------WVRGVTFHPGGKYLVSCG------------DDKTLRVWDTANKRNMKTL-EAHSHFVTSL-DFHRAHPY 390 (406)
Q Consensus 331 ~~h~~------~v~~l~~s~~g~~l~sgs------------~d~~i~vwd~~~~~~~~~l-~~h~~~v~~l-~~~~~~~~ 390 (406)
..|.. .+....|+|++.++++++ .++.|++||..+++.+..+ ..|...|.++ +|+|++.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~ 414 (435)
T 4e54_B 335 IPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDT 414 (435)
T ss_dssp CCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSC
T ss_pred ecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCE
Confidence 77653 234557888887777764 3468999999999988776 4677788887 69999999
Q ss_pred EEEeeCCCeEEEeecC
Q psy226 391 VVTGSVDKTVKVWECR 406 (406)
Q Consensus 391 l~sgs~Dg~v~iw~~~ 406 (406)
||+|+ |++|+||+++
T Consensus 415 lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 415 LASAM-GYHILIWSQQ 429 (435)
T ss_dssp EEEEC-SSEEEECCCC
T ss_pred EEEEc-CCcEEEEECC
Confidence 99886 8899999974
No 41
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.7e-43 Score=325.05 Aligned_cols=245 Identities=25% Similarity=0.422 Sum_probs=227.1
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC----cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEE
Q psy226 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG----EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKL 174 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~----~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~v 174 (406)
...+..|..+|.+++|+|++++|++|+.|+.|++||+.++ +....+.+|.+.|.++.|++++. +++++.|++|++
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~ 168 (340)
T 1got_B 90 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCAL 168 (340)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEE
T ss_pred ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEE
Confidence 4456789999999999999999999999999999999875 35667889999999999998765 889999999999
Q ss_pred EeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCC
Q psy226 175 WDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254 (406)
Q Consensus 175 wd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~ 254 (406)
||+.+++++..+.+|...|.+++|+|++.++++|+.|++|++||++++.+...+.+|...|.+++|+|++++|++|+.|+
T Consensus 169 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~ 248 (340)
T 1got_B 169 WDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDA 248 (340)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCccceeEEec--CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy226 255 TARVWSLATKETKAELRG--HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 332 (406)
+|++||+++......+.. +...|.+++|+| ++.++++|+.|+.|++||+.++..+..+.+
T Consensus 249 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~------------------~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~ 310 (340)
T 1got_B 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSK------------------SGRLLLAGYDDFNCNVWDALKADRAGVLAG 310 (340)
T ss_dssp CEEEEETTTTEEEEEECCTTCCSCEEEEEECT------------------TSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEECCCCcEEEEEccCCcccceEEEEECC------------------CCCEEEEECCCCeEEEEEcccCcEeeEeec
Confidence 999999998776665543 234799999998 478999999999999999999999999999
Q ss_pred CCcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy226 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362 (406)
Q Consensus 333 h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd 362 (406)
|...|.+++|+|+|.+|++||.|++|+|||
T Consensus 311 h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999999999999997
No 42
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-45 Score=357.76 Aligned_cols=283 Identities=10% Similarity=0.102 Sum_probs=233.1
Q ss_pred CCCCeEEEEEcCCC---------CEEEE-------------------EeCCCcEEEEEcCCCcEE----EEecccccCee
Q psy226 105 HRSPVIKVIFHPVF---------SLMAS-------------------CSEDATIRLWDYETGEYE----RALHGHLDSVQ 152 (406)
Q Consensus 105 h~~~V~~v~~~p~~---------~~lat-------------------gs~dg~v~vwd~~~~~~~----~~~~~h~~~V~ 152 (406)
+.++|.+|+|+|++ .+||+ |+.|++|+|||+.+++.. ..+.+|.+.|.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 67788999998876 55555 567899999999887642 34667889999
Q ss_pred eEEECCC------CCEEEEEeCCCcEEEEeCCCCeE-----------EEEEecCCcceEEEEEecCCCEEEEEeCCCcEE
Q psy226 153 DIAFDQS------GKLLVSCSADMSLKLWDMSTYQC-----------LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215 (406)
Q Consensus 153 ~l~~~~~------g~~l~sgs~d~~i~vwd~~~~~~-----------~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~ 215 (406)
+++|+|+ +.+||+|+.||+|++||+.++.. ...+.+|...|.+++|+|+ ..|++|+.||+|+
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~ 290 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVA 290 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEE
T ss_pred EEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEE
Confidence 9999996 57999999999999999976532 2467889999999999986 5899999999999
Q ss_pred EEEcCCCe-EEEEeecCCccEEEE--EECCCC-CEEEEEeCCCeEEEEeCCCccceeEEecCCc--eEEEEEeCCCCCcc
Q psy226 216 MWEVATGY-CVKTLTGHREWVRQI--KVSPDG-TLLASCSNDHTARVWSLATKETKAELRGHDH--TVECVAWAPGVASE 289 (406)
Q Consensus 216 iwd~~~~~-~~~~~~~~~~~v~~l--~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~ 289 (406)
+||++++. ....+.+|...|.++ +|+|+| .+|+||+.|++|++||+++.+....+.+|.. .|.+++|+|+
T Consensus 291 lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~---- 366 (524)
T 2j04_B 291 EFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQ---- 366 (524)
T ss_dssp EEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETT----
T ss_pred EEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCC----
Confidence 99998764 456688999999999 578888 8999999999999999998877777777754 4788999983
Q ss_pred ccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC---
Q psy226 290 SISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK--- 366 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~--- 366 (406)
+..+++++.|++|++||++++.++..+.+|.+.|.+|+|+|+|++|++|+.||+|++||...+
T Consensus 367 --------------~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~ 432 (524)
T 2j04_B 367 --------------IYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLH 432 (524)
T ss_dssp --------------TTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTT
T ss_pred --------------cCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhcc
Confidence 567999999999999999999988889999999999999999999999999999999985321
Q ss_pred -----------------------------------------ccceeeccccceEEEEEEeCCCC---EEEEeeCCCeEEE
Q psy226 367 -----------------------------------------RNMKTLEAHSHFVTSLDFHRAHP---YVVTGSVDKTVKV 402 (406)
Q Consensus 367 -----------------------------------------~~~~~l~~h~~~v~~l~~~~~~~---~l~sgs~Dg~v~i 402 (406)
..+.++.+|...|.+|+|+|+++ +||+|+.||+|+|
T Consensus 433 ~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrl 512 (524)
T 2j04_B 433 GIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTL 512 (524)
T ss_dssp CC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEE
T ss_pred ccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEE
Confidence 11223445777899999999965 9999999999999
Q ss_pred eecC
Q psy226 403 WECR 406 (406)
Q Consensus 403 w~~~ 406 (406)
|+++
T Consensus 513 w~l~ 516 (524)
T 2j04_B 513 EYLS 516 (524)
T ss_dssp EECS
T ss_pred EEcc
Confidence 9974
No 43
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7e-43 Score=336.60 Aligned_cols=283 Identities=27% Similarity=0.513 Sum_probs=255.6
Q ss_pred CceEEeccCCCCe-EEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEE
Q psy226 97 PEKFALSGHRSPV-IKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW 175 (406)
Q Consensus 97 ~~~~~l~~h~~~V-~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vw 175 (406)
+....+.+|..+| .++.+ ++++|++|+.||+|++||+.+++....+.+|.+.|.+++|++++ +|++|+.||+|++|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vw 188 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVW 188 (464)
T ss_dssp CEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEE
T ss_pred cceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEE
Confidence 3456789999885 56666 56799999999999999999999999999999999999999988 99999999999999
Q ss_pred eCCCCeEEEEEecCCcceEEEEEec--CCCEEEEEeCCCcEEEEEcCCCe-----------------------EEEEeec
Q psy226 176 DMSTYQCLKTMQGHDHNVTGVAFLP--NSDFVLSASRDKTIKMWEVATGY-----------------------CVKTLTG 230 (406)
Q Consensus 176 d~~~~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~i~iwd~~~~~-----------------------~~~~~~~ 230 (406)
|+.+++++..+.+|...|.+++|+| ++.++++|+.|++|++||+.++. .+..+.+
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 9999999999999999999999995 67899999999999999998764 2556788
Q ss_pred CCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEE
Q psy226 231 HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATG 310 (406)
Q Consensus 231 ~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 310 (406)
|...+.++ ++++.++++|+.|+.|++||+.+.+.+..+.+|...|.++.|+| ++.++++|
T Consensus 269 ~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~------------------~~~~l~sg 328 (464)
T 3v7d_B 269 HMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH------------------ERKRCISA 328 (464)
T ss_dssp CSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET------------------TTTEEEEE
T ss_pred ccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcC------------------CCCEEEEE
Confidence 98888876 57899999999999999999999999999999999999999998 46789999
Q ss_pred eCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCE
Q psy226 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390 (406)
Q Consensus 311 ~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~ 390 (406)
+.|+.|++||+++++++..+.+|...|.+++|+ +++|++|+.||.|++||+.++....... |...+..++|+|++.+
T Consensus 329 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 329 SMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNI 405 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSE
T ss_pred eCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCE
Confidence 999999999999999999999999999999997 5799999999999999999877655543 5667888999999999
Q ss_pred EEEeeCCCeEEEeecC
Q psy226 391 VVTGSVDKTVKVWECR 406 (406)
Q Consensus 391 l~sgs~Dg~v~iw~~~ 406 (406)
|++|+ ||.|++||++
T Consensus 406 l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 406 LVSGS-ENQFNIYNLR 420 (464)
T ss_dssp EEEEE-TTEEEEEETT
T ss_pred EEEec-CCeEEEEECC
Confidence 99998 9999999974
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8e-44 Score=338.44 Aligned_cols=298 Identities=19% Similarity=0.213 Sum_probs=255.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
..+++++|+|++++|++|+.||.|++||+.+++....+..| ..+....|++++++|++|+.|+.|++||+.+++....+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREID 135 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEET
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeec
Confidence 34558999999999999999999999999887765555555 44555578999999999999999999999999988888
Q ss_pred ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc
Q psy226 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET 266 (406)
Q Consensus 187 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 266 (406)
.+|...|.+++|+|++++|++|+.|++|++||+.++..+..+.+|...|.+++|+|++.+|++++.|+.|++||+++++.
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred eeEEec---CCceEEEEEeCCCCCccccc---cccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCEEE
Q psy226 267 KAELRG---HDHTVECVAWAPGVASESIS---EAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI-GHDNWVRG 339 (406)
Q Consensus 267 ~~~~~~---~~~~v~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~h~~~v~~ 339 (406)
...+.. |...+.++.+.|........ .........+++.++++|+.||.|++||+++++.+..+. +|...|.+
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCcee
Confidence 888774 56788899887653321111 111122334578899999999999999999998877765 48889999
Q ss_pred EEEcCCCC-EEEEEeCCCeEEEEeCCCCcc-ceeecc-ccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 340 VTFHPGGK-YLVSCGDDKTLRVWDTANKRN-MKTLEA-HSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 340 l~~s~~g~-~l~sgs~d~~i~vwd~~~~~~-~~~l~~-h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
++|+|+++ +|++|+.||.|++||+.+++. +..+.. |...|.++.| +++.+|++|+.||.|++|++.
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEEC
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEecc
Confidence 99999999 999999999999999998754 777776 6777888865 577899999999999999963
No 45
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.2e-43 Score=376.64 Aligned_cols=310 Identities=27% Similarity=0.491 Sum_probs=264.3
Q ss_pred CceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 97 ~~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
.....+.+|.++|++++|+|++++||+|+.||+|++||..+++....+.+|...|.+++|+|+|++|++|+.|++|++||
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCcceEEEEEec--CCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCC
Q psy226 177 MSTYQCLKTMQGHDHNVTGVAFLP--NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~ 254 (406)
+.+++++..+.+|...|.+++|+| ++.++++|+.|++|++||+.++.++..+.+|...|.+++|+|+++++++|+.||
T Consensus 686 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg 765 (1249)
T 3sfz_A 686 SATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADG 765 (1249)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSS
T ss_pred CCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCC
Confidence 999999999999999999999999 455899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCccceeEEec-------------CCceEEEEEeCCCCCccccc-----------------c-------ccCC
Q psy226 255 TARVWSLATKETKAELRG-------------HDHTVECVAWAPGVASESIS-----------------E-------AAGR 297 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~~~-----------------~-------~~~~ 297 (406)
.|++||+.+......+.. +...+.+++|+|+....... . ....
T Consensus 766 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~ 845 (1249)
T 3sfz_A 766 TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQY 845 (1249)
T ss_dssp EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCE
T ss_pred eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEE
Confidence 999999987755444321 11234455555542111000 0 0000
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-------------
Q psy226 298 PPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA------------- 364 (406)
Q Consensus 298 ~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~------------- 364 (406)
....+++.++++++.|+.|++||+.++..+..+.+|...|.+++|+|+|++|++++.||.|++||+.
T Consensus 846 ~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 925 (1249)
T 3sfz_A 846 CDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQE 925 (1249)
T ss_dssp EEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccce
Confidence 0112357899999999999999999999999999999999999999999999999999999999843
Q ss_pred ------------------------------------------------------------------CCccceeeccccce
Q psy226 365 ------------------------------------------------------------------NKRNMKTLEAHSHF 378 (406)
Q Consensus 365 ------------------------------------------------------------------~~~~~~~l~~h~~~ 378 (406)
+++.+..+.+|...
T Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~ 1005 (1249)
T 3sfz_A 926 IDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKA 1005 (1249)
T ss_dssp EEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSC
T ss_pred eeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCc
Confidence 22333445678889
Q ss_pred EEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 379 VTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 379 v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|++++|+|++++|++|+.||.|++||+.
T Consensus 1006 v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp CCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 9999999999999999999999999963
No 46
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-45 Score=346.62 Aligned_cols=285 Identities=19% Similarity=0.333 Sum_probs=255.0
Q ss_pred CCCCeEEEEEcCCCC-EEEEE----------eCCCcEEEEEcCCCcEE--EEecccccCeeeEEECCCCCEEEEEeCCCc
Q psy226 105 HRSPVIKVIFHPVFS-LMASC----------SEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMS 171 (406)
Q Consensus 105 h~~~V~~v~~~p~~~-~latg----------s~dg~v~vwd~~~~~~~--~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~ 171 (406)
+..+|.+++|+|++. +||+| +.||.|++||+.+++.. .....|...|.+++|+|++.+|++|+.|+.
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 90 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGS 90 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSC
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCe
Confidence 445788999999987 99999 89999999999987522 122358899999999999999999999999
Q ss_pred EEEEeCCC----CeEEEEEecCCcceEEEEEecC-CCEEEEEeCCCcEEEEEcCCCe------EEE---EeecCCccEEE
Q psy226 172 LKLWDMST----YQCLKTMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVATGY------CVK---TLTGHREWVRQ 237 (406)
Q Consensus 172 i~vwd~~~----~~~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~i~iwd~~~~~------~~~---~~~~~~~~v~~ 237 (406)
|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.|++|++||+.++. ... .+.+|...|.+
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999987 4578889999999999999998 8899999999999999998876 332 24678999999
Q ss_pred EEECCC-CCEEEEEeCCCeEEEEeCCCccceeEEecC------CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEE
Q psy226 238 IKVSPD-GTLLASCSNDHTARVWSLATKETKAELRGH------DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATG 310 (406)
Q Consensus 238 l~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 310 (406)
++|+|+ +.+|++++.|+.|++||+++.+....+..+ ...+.+++|+|+ +..+++++
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~~l~~~ 233 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPK-----------------NSTRVATA 233 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSS-----------------CTTEEEEE
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCC-----------------CCCEEEEE
Confidence 999999 789999999999999999998888888776 788999999984 23589999
Q ss_pred eCCC---cEEEEECCCC-eEEEEEe-CCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEE
Q psy226 311 SRDK---TIKLWDVGSG-SLLFTLI-GHDNWVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384 (406)
Q Consensus 311 ~~d~---~i~lwd~~~~-~~~~~~~-~h~~~v~~l~~s~-~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 384 (406)
+.|+ .|++||++++ .++..+. +|...|.+++|+| ++++|++++.|+.|++||+.+++.+.++..|...|.+++|
T Consensus 234 ~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 313 (416)
T 2pm9_A 234 TGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKF 313 (416)
T ss_dssp ECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEE
T ss_pred ECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEE
Confidence 9999 9999999986 6677777 8999999999999 9999999999999999999999999999999999999999
Q ss_pred eCCC-CEEEEeeCCCeEEEeecC
Q psy226 385 HRAH-PYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 385 ~~~~-~~l~sgs~Dg~v~iw~~~ 406 (406)
+|++ .+|++++.||.|++|++.
T Consensus 314 s~~~~~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 314 APEAPDLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp CTTCTTEEEECCSSSEEEEEESC
T ss_pred CCCCCCEEEEEecCCcEEEEEcc
Confidence 9999 899999999999999974
No 47
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.9e-43 Score=319.58 Aligned_cols=259 Identities=24% Similarity=0.439 Sum_probs=218.5
Q ss_pred EEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC--CeEEEEEecCCcceEEEEEecC--CCEEEEEeCCCcEEEE
Q psy226 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST--YQCLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTIKMW 217 (406)
Q Consensus 142 ~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~--~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~iw 217 (406)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+.+ .+++.++.+|..+|.+++|+|+ +++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 45678999999999999999999999999999999974 4677899999999999999863 8899999999999999
Q ss_pred EcCCCe--EEEEeecCCccEEEEEECCC--CCEEEEEeCCCeEEEEeCCCcc--ceeEEecCCceEEEEEeCCCCCcccc
Q psy226 218 EVATGY--CVKTLTGHREWVRQIKVSPD--GTLLASCSNDHTARVWSLATKE--TKAELRGHDHTVECVAWAPGVASESI 291 (406)
Q Consensus 218 d~~~~~--~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~ 291 (406)
|+.++. .+..+.+|...|.+++|+|+ |.+|++|+.|++|++||+++.. ....+.+|...|.+++|+|......-
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998874 56678889999999999997 8999999999999999998653 24567899999999999986321100
Q ss_pred ccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe----EEEEEeCCCcCEEEEEEcCCC---CEEEEEeCCCeEEEEeCC
Q psy226 292 SEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS----LLFTLIGHDNWVRGVTFHPGG---KYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 292 ~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~----~~~~~~~h~~~v~~l~~s~~g---~~l~sgs~d~~i~vwd~~ 364 (406)
.......+.+|++|+.|++|++||++++. +...+.+|...|.+++|+|++ .+|++|+.|++|+|||+.
T Consensus 163 -----~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~ 237 (297)
T 2pm7_B 163 -----EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD 237 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred -----cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeC
Confidence 00001135689999999999999998765 667889999999999999985 899999999999999987
Q ss_pred CCcc---ceee--ccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 365 NKRN---MKTL--EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 365 ~~~~---~~~l--~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+... ...+ ..|...|.+++|+|++++||+|+.||+|++|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp STTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 6431 1223 467888999999999999999999999999985
No 48
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.1e-42 Score=311.96 Aligned_cols=296 Identities=26% Similarity=0.443 Sum_probs=250.3
Q ss_pred cCCCCCCceEE-eccCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec--ccccCeeeEEECCCCCEEEE
Q psy226 91 EWIPRAPEKFA-LSGHRS--PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--GHLDSVQDIAFDQSGKLLVS 165 (406)
Q Consensus 91 ~~~~~~~~~~~-l~~h~~--~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~g~~l~s 165 (406)
..+|..|++.. .++..+ ..++|+|||++ +||+|. |++|+|||+.+++..+.+. +|...|++++|+|+|++|++
T Consensus 7 r~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 7 RYIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp CCCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred cccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 45666666542 123332 35789999885 777765 9999999999999887664 67788999999999999999
Q ss_pred EeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC-eEEEEeecCCccEEEEEECCCC
Q psy226 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG-YCVKTLTGHREWVRQIKVSPDG 244 (406)
Q Consensus 166 gs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~~ 244 (406)
|+.|++|++||+.+++++..+.+|...+.++.+ ++..+++|+.++.+++|+..++ ..+..+.+|...+..+.+++++
T Consensus 85 gs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 85 GTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred EECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 999999999999999999999999988877555 5679999999999999998765 4667788999999999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCccc----eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEE
Q psy226 245 TLLASCSNDHTARVWSLATKET----KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWD 320 (406)
Q Consensus 245 ~~l~s~~~d~~v~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd 320 (406)
+++++++.|++|++||+++++. ......+...|.++.+.|... ....+++++.++.|++||
T Consensus 163 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 163 RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS---------------NVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTST---------------TEEEEEECTTTCEEEEEE
T ss_pred CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCC---------------cEEEEEecCCCCEEEEEe
Confidence 9999999999999999987653 345567788899999987421 112346778899999999
Q ss_pred CCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEe--CCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCC
Q psy226 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG--DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDK 398 (406)
Q Consensus 321 ~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs--~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg 398 (406)
........... +...+..+.|+|++..+++++ .|+.|+|||+.+++.+.++.+|.+.|++|+|+|++++|||||.||
T Consensus 228 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~ 306 (318)
T 4ggc_A 228 VCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADE 306 (318)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTT
T ss_pred ccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 99888766544 666799999999999887765 799999999999999999999999999999999999999999999
Q ss_pred eEEEeecC
Q psy226 399 TVKVWECR 406 (406)
Q Consensus 399 ~v~iw~~~ 406 (406)
+|+|||+.
T Consensus 307 ~v~iWd~~ 314 (318)
T 4ggc_A 307 TLRLWRCF 314 (318)
T ss_dssp EEEEECCS
T ss_pred eEEEEECC
Confidence 99999973
No 49
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.1e-43 Score=360.33 Aligned_cols=290 Identities=27% Similarity=0.420 Sum_probs=268.9
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
...+.+|.++|++++|||++++||+|+.||.|+|||+.+++....+.+|..+|.+++|+|++++|++|+.||.|++||+.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC-eEEEEeecCCccEEEEEECC-CCCEEEEEeCCCeE
Q psy226 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG-YCVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTA 256 (406)
Q Consensus 179 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~v 256 (406)
+++.+..+.+|...|.+++|+|++.+|++++.|++|++||+.++ .....+.+|...|.+++|+| ++..+++++.||.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 86 TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999999999999999999999999999999999999999987 67788899999999999999 89999999999999
Q ss_pred EEEeCCCccceeEEecCC-ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc
Q psy226 257 RVWSLATKETKAELRGHD-HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335 (406)
Q Consensus 257 ~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~ 335 (406)
++||+.+......+..+. ..+.++.|+|. +++.++++++.|+.|++||+.+++++..+.+|..
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~----------------~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 229 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPL----------------PDKPYMITASDDLTIKIWDYQTKSCVATLEGHMS 229 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCS----------------TTCCEEEEECTTSEEEEEETTTTEEEEEEECCSS
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEEC----------------CCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 999998887777776655 88999999883 2467899999999999999999999999999999
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCC--EEEEeeCCCeEEEeec
Q psy226 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP--YVVTGSVDKTVKVWEC 405 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~--~l~sgs~Dg~v~iw~~ 405 (406)
.|.+++|+|+|++|++|+.||.|++||..+++.+..+..|...+.+++|+|++. ++++|+ |+.+.+|++
T Consensus 230 ~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 300 (814)
T 3mkq_A 230 NVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSL 300 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEEC
T ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEc
Confidence 999999999999999999999999999999999999999999999999999987 466555 666777764
No 50
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.4e-44 Score=332.88 Aligned_cols=279 Identities=15% Similarity=0.149 Sum_probs=227.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC-------cEEEEEcCCCcE----------EEEecccccCeeeEEECCCCCEEEEE--
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDA-------TIRLWDYETGEY----------ERALHGHLDSVQDIAFDQSGKLLVSC-- 166 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg-------~v~vwd~~~~~~----------~~~~~~h~~~V~~l~~~~~g~~l~sg-- 166 (406)
..||++++|+|++++||+|+.|. .|++|++..+.. ...+.+|.+.|.+++++ ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 46999999999999999998654 499999876531 23467888899988875 4566665
Q ss_pred ---------eCCCcEEEEeCCCCeE----EEEE-----ecCCcceEEEEEecCCCEEEEE--eCCCcEEEEEcCCCeEEE
Q psy226 167 ---------SADMSLKLWDMSTYQC----LKTM-----QGHDHNVTGVAFLPNSDFVLSA--SRDKTIKMWEVATGYCVK 226 (406)
Q Consensus 167 ---------s~d~~i~vwd~~~~~~----~~~~-----~~h~~~v~~~~~~p~~~~l~s~--s~d~~i~iwd~~~~~~~~ 226 (406)
+.|+++++|++.+... .... ..++..+.+++|+|||++++++ +.|++|++||+.++.++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 4577899998764321 1111 1234568899999999987654 478999999999999988
Q ss_pred EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCcccee--EEecCCceEEEEEeCCCCCccccccccCCCCCCCCC
Q psy226 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA--ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGG 304 (406)
Q Consensus 227 ~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (406)
.+. |...|.+++|+|+|+++++++.|+ +++|+..++.... ....|...|.+++|+| ++
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~v~fsp------------------dg 231 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITGSS-LEVISTVTGSCIARKTDFDKNWSLSKINFIA------------------DD 231 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECSSC-EEEEETTTCCEEEEECCCCTTEEEEEEEEEE------------------TT
T ss_pred EeC-CCCceEEEEEccCCceEEecccee-EEEEEeccCcceeeeecCCCCCCEEEEEEcC------------------CC
Confidence 885 677899999999999999998655 5566665555443 3456888999999998 47
Q ss_pred CEEEEEeCCC----cEEEEECCCCeE----EEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee-ccc
Q psy226 305 PYLATGSRDK----TIKLWDVGSGSL----LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL-EAH 375 (406)
Q Consensus 305 ~~l~s~~~d~----~i~lwd~~~~~~----~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l-~~h 375 (406)
.++++++.|+ .+++||+..+.. ...+.+|...|++++|+|+|++||+|+.|++|+|||+.+++++.++ .+|
T Consensus 232 ~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH 311 (365)
T 4h5i_A 232 TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAH 311 (365)
T ss_dssp EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSS
T ss_pred CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcc
Confidence 7899999887 688999876653 3567889999999999999999999999999999999999998875 789
Q ss_pred cceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 376 ~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
...|++|+|+|++++|||||.|++|+||++.
T Consensus 312 ~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 312 SFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred cCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999999999999999999973
No 51
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6e-43 Score=317.45 Aligned_cols=250 Identities=22% Similarity=0.384 Sum_probs=218.4
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--cEEEEecccccCeeeEEECCC--CCEEEEEeCCCcEEEE
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG--EYERALHGHLDSVQDIAFDQS--GKLLVSCSADMSLKLW 175 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~--~~~~~~~~h~~~V~~l~~~~~--g~~l~sgs~d~~i~vw 175 (406)
..+.+|.++|++++|+|++++||+|+.|++|+|||+.++ +....+.+|.++|.+++|+++ |++|++|+.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 356799999999999999999999999999999999753 567889999999999999864 8999999999999999
Q ss_pred eCCCCe--EEEEEecCCcceEEEEEecC--CCEEEEEeCCCcEEEEEcCCCe--EEEEeecCCccEEEEEECCC------
Q psy226 176 DMSTYQ--CLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTIKMWEVATGY--CVKTLTGHREWVRQIKVSPD------ 243 (406)
Q Consensus 176 d~~~~~--~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~------ 243 (406)
|+.+++ .+..+.+|...|.+++|+|+ +.+|++|+.|++|++||++++. ....+.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998763 56678889999999999997 7899999999999999998763 24567899999999999997
Q ss_pred -------CCEEEEEeCCCeEEEEeCCCcc----ceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC
Q psy226 244 -------GTLLASCSNDHTARVWSLATKE----TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR 312 (406)
Q Consensus 244 -------~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 312 (406)
+++|++|+.|++|++||+++.. ....+.+|...|.+++|+|+.. .+.+|++|+.
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~---------------~~~~las~s~ 227 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL---------------LRSYMASVSQ 227 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS---------------SSEEEEEEET
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCC---------------CceEEEEEEC
Confidence 5799999999999999998765 4567889999999999998420 1468999999
Q ss_pred CCcEEEEECCCCe---EEEEE--eCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy226 313 DKTIKLWDVGSGS---LLFTL--IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 313 d~~i~lwd~~~~~---~~~~~--~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~ 364 (406)
|++|++||+.++. ....+ .+|...|.+++|+|+|++|++++.|++|+||+..
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 9999999987642 22233 4688899999999999999999999999999976
No 52
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1e-42 Score=333.01 Aligned_cols=272 Identities=31% Similarity=0.548 Sum_probs=250.5
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeE
Q psy226 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182 (406)
Q Consensus 103 ~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~ 182 (406)
.+|..+|+|+.+ ++++|++|+.||+|++||..+++....+.+|...|.+++| ++++|++|+.||+|++||+.++++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 467788998877 7899999999999999999999999999999999999999 788999999999999999999999
Q ss_pred EEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEE---EEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Q psy226 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV---KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259 (406)
Q Consensus 183 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vw 259 (406)
+..+.+|...|.+++|+ ++++++|+.|++|++||+.++... ..+.+|...|.++++ +++++++|+.||.|++|
T Consensus 206 ~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vw 281 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVW 281 (435)
T ss_dssp EEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEE
T ss_pred EEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEE
Confidence 99999999999999996 469999999999999999887654 677899999999999 78899999999999999
Q ss_pred eCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEE
Q psy226 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339 (406)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~ 339 (406)
|+++++.+..+.+|...|.++.+. +.++++|+.|+.|++||+++++++..+.+|...|.+
T Consensus 282 d~~~~~~~~~~~~~~~~v~~~~~~--------------------~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 282 NTSTCEFVRTLNGHKRGIACLQYR--------------------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 341 (435)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEEE--------------------TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred ECCcCcEEEEEcCCCCcEEEEEeC--------------------CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEE
Confidence 999999999999999999999884 358999999999999999999999999999999999
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCc---------cceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 340 VTFHPGGKYLVSCGDDKTLRVWDTANKR---------NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 340 l~~s~~g~~l~sgs~d~~i~vwd~~~~~---------~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
++| ++.+|++|+.||.|++||+.++. .+..+.+|...|.+++| ++.+|++|+.||+|++||+.
T Consensus 342 ~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 342 IRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp EEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred EEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 998 78899999999999999987665 67888999999999999 67889999999999999963
No 53
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.6e-42 Score=321.08 Aligned_cols=252 Identities=22% Similarity=0.368 Sum_probs=231.0
Q ss_pred cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy226 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218 (406)
Q Consensus 139 ~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd 218 (406)
+....+.+|.+.|++++|+|++++|++|+.|++|++||..+++....+..|...|.+++|+|++.++++|+.|+.+++|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 34567889999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred cCCC------eEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccc
Q psy226 219 VATG------YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292 (406)
Q Consensus 219 ~~~~------~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 292 (406)
+... .....+.+|...|.+++|+|++..|++++.|++|++||+.+++.+..+.+|...|.++.+.|.
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~------- 207 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS------- 207 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCC-------
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeC-------
Confidence 8643 345667789999999999999999999999999999999999999999999999999999874
Q ss_pred cccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee
Q psy226 293 EAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372 (406)
Q Consensus 293 ~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l 372 (406)
..+.+|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.+|++|+.|++|++||+.+.+.+..+
T Consensus 208 ---------~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 208 ---------ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp ---------SSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ---------CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 14678999999999999999999999999999999999999999999999999999999999988776666
Q ss_pred ccc--cceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 373 EAH--SHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 373 ~~h--~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
..+ ...+.+++|+|++.+|++|+.||+|++||++
T Consensus 279 ~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 279 SKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 543 3468999999999999999999999999963
No 54
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.8e-42 Score=315.40 Aligned_cols=251 Identities=28% Similarity=0.491 Sum_probs=225.7
Q ss_pred EEEEecccccCeeeEEECCCC-CEEEEEeCCCcEEEEeCCC-----CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCc
Q psy226 140 YERALHGHLDSVQDIAFDQSG-KLLVSCSADMSLKLWDMST-----YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213 (406)
Q Consensus 140 ~~~~~~~h~~~V~~l~~~~~g-~~l~sgs~d~~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~ 213 (406)
+..++.+|.+.|++++|+|++ ++|++|+.|++|++||+.+ +.++..+.+|...|.+++|+|++.+|++|+.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 456789999999999999965 8999999999999999853 3457788999999999999999999999999999
Q ss_pred EEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCcccccc
Q psy226 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISE 293 (406)
Q Consensus 214 i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 293 (406)
|++||+.++.++..+.+|...|.+++|+|++.+|++|+.|++|++||++ ......+.+|...|.++.+.|....
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~----- 162 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKA----- 162 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC--------
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCC-----
Confidence 9999999999999999999999999999999999999999999999996 4567788899999999999985321
Q ss_pred ccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeec
Q psy226 294 AAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373 (406)
Q Consensus 294 ~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~ 373 (406)
..++.++++++.|+.|++||+++++....+.+|...|.+++|+|+|++|++|+.||+|++||+.+++.+.++.
T Consensus 163 -------~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 163 -------DDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp ----------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred -------CCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 1245689999999999999999999999999999999999999999999999999999999999999888887
Q ss_pred cccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 374 AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 374 ~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.+ ..|.+++|+|++.+|++++.+ .+++|++
T Consensus 236 ~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~ 265 (319)
T 3frx_A 236 AQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSL 265 (319)
T ss_dssp CC-SCEEEEEECSSSSEEEEEETT-EEEEEEE
T ss_pred CC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEe
Confidence 65 579999999999999988755 5999985
No 55
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=4.3e-43 Score=336.04 Aligned_cols=280 Identities=15% Similarity=0.295 Sum_probs=237.9
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-----------EEEEecccc------------cCeeeEEECCCC
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE-----------YERALHGHL------------DSVQDIAFDQSG 160 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~-----------~~~~~~~h~------------~~V~~l~~~~~g 160 (406)
.|.++|++++|+|++.+||+|+.||.|+|||+.+++ ....+.+|. ..|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 467899999999999999999999999999999876 577888998 889999999998
Q ss_pred --CEEEEEeCCCcEEEEeCCCCeEE---------------------------------------EE-EecCCcceEEEEE
Q psy226 161 --KLLVSCSADMSLKLWDMSTYQCL---------------------------------------KT-MQGHDHNVTGVAF 198 (406)
Q Consensus 161 --~~l~sgs~d~~i~vwd~~~~~~~---------------------------------------~~-~~~h~~~v~~~~~ 198 (406)
.+|++|+.|++|++||+.+++.. .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999998764331 12 3679999999999
Q ss_pred ecCCCEEEEEeCCCcEEEEEcCC-CeEEE-------EeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEeCCCccc---
Q psy226 199 LPNSDFVLSASRDKTIKMWEVAT-GYCVK-------TLTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLATKET--- 266 (406)
Q Consensus 199 ~p~~~~l~s~s~d~~i~iwd~~~-~~~~~-------~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~v~vwd~~~~~~--- 266 (406)
+|++++|++| .|++|++||+.+ +.... .+.+|...|.+++|+|++ ++|++|+.||.|++||+++...
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 799999999984 44444 256899999999999998 9999999999999999998876
Q ss_pred -eeEEecCCc------------eEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeC
Q psy226 267 -KAELRGHDH------------TVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS-GSLLFTLIG 332 (406)
Q Consensus 267 -~~~~~~~~~------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~-~~~~~~~~~ 332 (406)
...+..|.. .|.+++|+| ++.+|++++. +.|++||+++ ++++..+.+
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------------------~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~ 325 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSH------------------SGRYMMTRDY-LSVKVWDLNMENRPVETYQV 325 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECT------------------TSSEEEEEES-SEEEEEETTCCSSCSCCEES
T ss_pred eeeEeccCCCccccccccccCceEEEEEECC------------------CCCEEEEeeC-CeEEEEeCCCCccccceeec
Confidence 677888876 899999998 4778999999 9999999997 888888888
Q ss_pred CCcC---------------EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc-----------------------
Q psy226 333 HDNW---------------VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA----------------------- 374 (406)
Q Consensus 333 h~~~---------------v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~----------------------- 374 (406)
|... +..++|+|++++|++|+.||.|++||+.+++.+ .+..
T Consensus 326 ~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (447)
T 3dw8_B 326 HEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRK 404 (447)
T ss_dssp CGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCC
T ss_pred cccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcc
Confidence 8642 234999999999999999999999999887654 2222
Q ss_pred ----------ccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 375 ----------HSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 375 ----------h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+...|.+++|+|++.+||+++.++ +.+|.-
T Consensus 405 ~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 405 KDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp TTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred cccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 234688999999999999998876 777764
No 56
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.1e-41 Score=324.73 Aligned_cols=279 Identities=30% Similarity=0.505 Sum_probs=257.8
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
....+.+|..+|++++|+ ++++++|+.||+|++||+.+++....+.+|...|.+++|+ ++.|++|+.|++|++||+
T Consensus 151 ~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDI 226 (445)
T ss_dssp EEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEES
T ss_pred EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEEC
Confidence 345678999999999998 5799999999999999999999999999999999999995 578999999999999999
Q ss_pred CCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Q psy226 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257 (406)
Q Consensus 178 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~ 257 (406)
.+++++..+.+|...|.+++| +++++++|+.|+.|++||+.++.++..+.+|...|.++.| ++.++++|+.|+.|+
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~ 302 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIR 302 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEE
T ss_pred CCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEE
Confidence 999999999999999999999 6889999999999999999999999999999999999999 788999999999999
Q ss_pred EEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC---CC
Q psy226 258 VWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG---HD 334 (406)
Q Consensus 258 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~---h~ 334 (406)
+||+++++....+.+|...+.++.+. +.++++|+.||.|++||+++++++..+.+ |.
T Consensus 303 i~d~~~~~~~~~~~~~~~~v~~~~~~--------------------~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 303 VWDVETGNCIHTLTGHQSLTSGMELK--------------------DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ 362 (445)
T ss_dssp EEETTTCCEEEEECCCCSCEEEEEEE--------------------TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCS
T ss_pred EEECCCCCEEEEEcCCcccEEEEEEe--------------------CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCC
Confidence 99999999999999999999888774 34899999999999999999999999886 88
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee-----ccccceEEEEEEeCCCCEEEEeeCCCe----EEEeec
Q psy226 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL-----EAHSHFVTSLDFHRAHPYVVTGSVDKT----VKVWEC 405 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l-----~~h~~~v~~l~~~~~~~~l~sgs~Dg~----v~iw~~ 405 (406)
..|.+++|+ +++|++|+.||.|++||+.+++.+..+ ..|...|++++|+|++.+||+|+.||+ |.+||+
T Consensus 363 ~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df 440 (445)
T 2ovr_B 363 SAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 440 (445)
T ss_dssp SCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEEC
T ss_pred CCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEEC
Confidence 899999996 579999999999999999999988887 578889999999999999999999998 999997
Q ss_pred C
Q psy226 406 R 406 (406)
Q Consensus 406 ~ 406 (406)
+
T Consensus 441 ~ 441 (445)
T 2ovr_B 441 D 441 (445)
T ss_dssp C
T ss_pred C
Confidence 4
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-42 Score=330.24 Aligned_cols=280 Identities=19% Similarity=0.286 Sum_probs=243.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
..+....|+|++++||+|+.||.|++||+.+++....+.+|...|++++|+|++++|++|+.|++|++||+.+++.+..+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE
Confidence 33455578999999999999999999999999988888999999999999999999999999999999999999999999
Q ss_pred ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecC---CccEEE---------------------EEECC
Q psy226 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH---REWVRQ---------------------IKVSP 242 (406)
Q Consensus 187 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~---~~~v~~---------------------l~~~~ 242 (406)
.+|...|.+++|+|++++|++++.|++|++||++++..+..+..| ...+.+ ++|+|
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 257 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT 257 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC
Confidence 999999999999999999999999999999999999999888753 334444 45578
Q ss_pred CCCEEEEEeCCCeEEEEeCCCccceeEEe-cCCceEEEEEeCCCCCccccccccCCCCCCCCCC-EEEEEeCCCcEEEEE
Q psy226 243 DGTLLASCSNDHTARVWSLATKETKAELR-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGP-YLATGSRDKTIKLWD 320 (406)
Q Consensus 243 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~lwd 320 (406)
++++|++|+.||.|++||+++......+. .|...|.+++|+|+ +. +|++|+.||.|++||
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~------------------~~~~l~~g~~dg~i~vwd 319 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGN------------------NANYIYAGYENGMLAQWD 319 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSS------------------CTTEEEEEETTSEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCC------------------CCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999887766654 58889999999984 45 899999999999999
Q ss_pred CCCCeE-EEEEeC-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---------cceeeccccceEEEEEEeCCCC
Q psy226 321 VGSGSL-LFTLIG-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR---------NMKTLEAHSHFVTSLDFHRAHP 389 (406)
Q Consensus 321 ~~~~~~-~~~~~~-h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~---------~~~~l~~h~~~v~~l~~~~~~~ 389 (406)
+++++. +..+.+ |...|.++.+ |++++|++++.|+.|++||+.... ....+..|...|.+++|+|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 398 (420)
T 3vl1_A 320 LRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE 398 (420)
T ss_dssp TTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS
T ss_pred cCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC
Confidence 998753 566666 6778888865 578899999999999999987632 2234556788899999999999
Q ss_pred ---EEEEeeCCCeEEEeec
Q psy226 390 ---YVVTGSVDKTVKVWEC 405 (406)
Q Consensus 390 ---~l~sgs~Dg~v~iw~~ 405 (406)
.|++.+.+|.+.+|++
T Consensus 399 ~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 399 SNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp SSCEEEEEETTTEEEEEES
T ss_pred CcceEEEEcCCceEEEEec
Confidence 6777778999999986
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-42 Score=317.90 Aligned_cols=243 Identities=27% Similarity=0.496 Sum_probs=205.4
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-------CcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-------GEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~-------~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
+|..+|.+++|+|++++||+|+.|++|+|||... .+....+.+|...|.+++|+|+|++|++|+.|++|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 3999999999999999999999999999999853 345677899999999999999999999999999999999
Q ss_pred CCC----CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC--eEEEEeecCCccEEEEEECCC--CCEEE
Q psy226 177 MST----YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG--YCVKTLTGHREWVRQIKVSPD--GTLLA 248 (406)
Q Consensus 177 ~~~----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~--~~~l~ 248 (406)
+.. .+++..+.+|...|.+++|+|++.+|++|+.|++|++||..++ .++..+.+|...|.+++|+|+ +.+|+
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 942 3677889999999999999999999999999999999999876 678899999999999999998 77899
Q ss_pred EEeCCCeEEEEeCCCc--------cceeEEec-CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEE
Q psy226 249 SCSNDHTARVWSLATK--------ETKAELRG-HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLW 319 (406)
Q Consensus 249 s~~~d~~v~vwd~~~~--------~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lw 319 (406)
+|+.|++|++||+... .....+.. |...|.+++|++ +.++++++.|+.|++|
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-------------------~~~l~s~~~dg~v~iw 276 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-------------------NGLIASVGADGVLAVY 276 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-------------------TSCEEEEETTSCEEEE
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-------------------CCEEEEEeCCCEEEEE
Confidence 9999999999998754 22334444 889999999986 2379999999999999
Q ss_pred ECCCCe--EEEE-EeCCCc-CEEEEEEcC--CCCEEEEEeCCCeEEEEeCCC
Q psy226 320 DVGSGS--LLFT-LIGHDN-WVRGVTFHP--GGKYLVSCGDDKTLRVWDTAN 365 (406)
Q Consensus 320 d~~~~~--~~~~-~~~h~~-~v~~l~~s~--~g~~l~sgs~d~~i~vwd~~~ 365 (406)
|..++. .... +.+|.. .|.+++|+| ++++|++|+.||+|+|||+..
T Consensus 277 ~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 277 EEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 998774 3333 367887 899999999 789999999999999999864
No 59
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=320.30 Aligned_cols=249 Identities=30% Similarity=0.551 Sum_probs=219.8
Q ss_pred cEEEEeccccc-CeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEE---EEecCCcceEEEEEecCCCEEEEEeCCCcE
Q psy226 139 EYERALHGHLD-SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK---TMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214 (406)
Q Consensus 139 ~~~~~~~~h~~-~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~---~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 214 (406)
+....+.+|.+ .|.+++|+|+|++|++|+.|++|++||+.++.... ...+|...|.+++|+|++++|++|+.|++|
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 45677889988 99999999999999999999999999998775432 236899999999999999999999999999
Q ss_pred EEEEcCCC--eEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCcc---ceeEEecCCceEEEEEeCCCCCcc
Q psy226 215 KMWEVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE---TKAELRGHDHTVECVAWAPGVASE 289 (406)
Q Consensus 215 ~iwd~~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~ 289 (406)
++||+.++ .++..+.+|...|.+++|+|++++|++|+.|++|++||+.... ....+.+|...|.+++|+|
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p----- 160 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP----- 160 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-----
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-----
Confidence 99999876 4678899999999999999999999999999999999997654 3556788999999999998
Q ss_pred ccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-
Q psy226 290 SISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS--LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK- 366 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~--~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~- 366 (406)
++.+|++|+.|+.|++||.+++. +...+.+|...|.+++|+|+|++|++|+.|++|+|||....
T Consensus 161 -------------~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~ 227 (345)
T 3fm0_A 161 -------------SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPG 227 (345)
T ss_dssp -------------SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTT
T ss_pred -------------CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCC
Confidence 46789999999999999998875 45788999999999999999999999999999999996322
Q ss_pred --------------ccceeecc-ccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 367 --------------RNMKTLEA-HSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 367 --------------~~~~~l~~-h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+++.++.+ |...|.+++|+|++.+|++++.|+.|++|+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~ 281 (345)
T 3fm0_A 228 NEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQE 281 (345)
T ss_dssp CTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEE
T ss_pred CCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEe
Confidence 22334444 8889999999999999999999999999985
No 60
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.8e-43 Score=324.33 Aligned_cols=248 Identities=21% Similarity=0.315 Sum_probs=213.8
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE----EEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE----RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~----~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
...+|...|++++|+|++. +++++.||+|+|||+.+++.. ....+|...|++++|+|+|++|++|+.|++|++||
T Consensus 89 ~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 4557999999999999976 456788999999999887643 23458999999999999999999999999999999
Q ss_pred CCCCeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEEEee--cCCccEEEEEECCC-CCEEEEEeC
Q psy226 177 MSTYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTLT--GHREWVRQIKVSPD-GTLLASCSN 252 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~-~~~l~s~~~ 252 (406)
+.+++++..+.+|...|.+++|+|++. ++++++.|++|++||++++.....+. .|...+.+++|+|+ +.+|++|+.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 999999999999999999999999875 78999999999999999987766543 56778999999997 568899999
Q ss_pred CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy226 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 332 (406)
|+.|++||+++++....+.+|...|.+++|+|+ ++.+|++|+.|++|+|||+++++++.. .+
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~-----------------~~~~lasgs~D~~i~iwd~~~~~~~~~-~~ 309 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYH-----------------SSPFLASISEDCTVAVLDADFSEVFRD-LS 309 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCSSCEEEEEECSS-----------------SSCCEEEEETTSCEEEECTTSCEEEEE-CC
T ss_pred ccceeEEECCCCcEeEEEeccceeEEEEEEcCC-----------------CCCEEEEEeCCCEEEEEECCCCcEeEE-CC
Confidence 999999999999999999999999999999984 346899999999999999999887755 58
Q ss_pred CCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCc
Q psy226 333 HDNWVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 333 h~~~v~~l~~s~-~g~~l~sgs~d~~i~vwd~~~~~ 367 (406)
|.+.|++|+|+| ++.+|+|||.||+|++||+.+..
T Consensus 310 H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 310 HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 999999999999 79999999999999999997643
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.3e-42 Score=317.84 Aligned_cols=282 Identities=18% Similarity=0.305 Sum_probs=251.5
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeE-
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC- 182 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~- 182 (406)
-|.++|.+++|+|++++++++..++.+.+|+...........+|...|.+++|+|++++|++++ |+.|++||+.+++.
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK 85 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCce
Confidence 3567899999999999999998888887776665544445558999999999999999999998 99999999986542
Q ss_pred --EEEEe--cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe--EEEEeecCCccEEEEEECCCCCEEEEEeCCCeE
Q psy226 183 --LKTMQ--GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY--CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256 (406)
Q Consensus 183 --~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v 256 (406)
...+. +|...|.+++|+|++++|++++.|+.|++||+.++. ....+.+|...+.+++|+|+++++++++.|+.|
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 23333 788999999999999999999999999999999877 667788999999999999999999999999999
Q ss_pred EEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC
Q psy226 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336 (406)
Q Consensus 257 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~ 336 (406)
++||+++.+....+..|...+.++.|+| ++.++++++.|+.|++||+++++.+..+. |...
T Consensus 166 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~------------------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~ 226 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHTDGASCIDISN------------------DGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQ 226 (337)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECT------------------TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSC
T ss_pred EEEeCCCCceeeeeecccCceEEEEECC------------------CCCEEEEEecCCcEEEEECCCCceEeeec-CCCc
Confidence 9999999988889999999999999998 46789999999999999999999887764 7788
Q ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 337 VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 337 v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+.+++|+|++++|++++.|+.|++||+.+++. ..+..|...|.+++|+|++++|++++.||.|++||++
T Consensus 227 v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 99999999999999999999999999988765 4677899999999999999999999999999999963
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.8e-41 Score=323.83 Aligned_cols=276 Identities=33% Similarity=0.607 Sum_probs=254.1
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
..+.+|.+.|.. ++++++++|++|+.||+|++||+.+++....+.+|...|.+++|+ +++|++|+.|++|++||+.+
T Consensus 112 ~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~ 188 (445)
T 2ovr_B 112 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAET 188 (445)
T ss_dssp EEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTT
T ss_pred EEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCc
Confidence 468899987643 355568999999999999999999999999999999999999997 57999999999999999999
Q ss_pred CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vw 259 (406)
++++..+.+|...|.++.|+ ++.+++|+.|++|++||+.++.++..+.+|...|.++++ ++.++++|+.|+.|++|
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iw 264 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 264 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEE
T ss_pred CcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEE
Confidence 99999999999999999996 578999999999999999999999999999999999999 78899999999999999
Q ss_pred eCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEE
Q psy226 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339 (406)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~ 339 (406)
|+++.+....+.+|...|.++.|. +.++++|+.|+.|++||+++++++..+.+|...+.+
T Consensus 265 d~~~~~~~~~~~~~~~~v~~~~~~--------------------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 324 (445)
T 2ovr_B 265 DPETETCLHTLQGHTNRVYSLQFD--------------------GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 324 (445)
T ss_dssp EGGGTEEEEEECCCSSCEEEEEEC--------------------SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEE
T ss_pred ECCCCcEeEEecCCCCceEEEEEC--------------------CCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEE
Confidence 999999999999999999999983 458999999999999999999999999999999998
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc---ccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA---HSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 340 l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~---h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+.++ +++|++|+.||.|++||+.+++.+.++.. |...|++++|+ +.+|++|+.||.|++||++
T Consensus 325 ~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 325 MELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp EEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred EEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECC
Confidence 8874 67999999999999999999999888876 88899999996 5799999999999999964
No 63
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-43 Score=333.59 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=230.1
Q ss_pred EEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCC
Q psy226 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211 (406)
Q Consensus 132 vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d 211 (406)
.|+..+....+.+.+|.+.|++++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|+|++++|++|+.|
T Consensus 50 ~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d 129 (380)
T 3iz6_a 50 SFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD 129 (380)
T ss_dssp CCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS
T ss_pred ccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 35555556678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCCCe-------EEEEeecCCccEEEEEECCC-CCEEEEEeCCCeEEEEeCCCccceeEE-----ecCCceEE
Q psy226 212 KTIKMWEVATGY-------CVKTLTGHREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETKAEL-----RGHDHTVE 278 (406)
Q Consensus 212 ~~i~iwd~~~~~-------~~~~~~~~~~~v~~l~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~-----~~~~~~v~ 278 (406)
++|++||+.+.. ....+.+|...|.++.|.|+ +..|++|+.|++|++||+.++..+..+ .+|...|.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 999999986532 34567899999999999997 457999999999999999998887766 67889999
Q ss_pred EEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECC-CCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCe
Q psy226 279 CVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG-SGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357 (406)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~-~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~ 357 (406)
++.|.|. ++.++++|+.|+.|++||++ .+..+..+.+|...|.+++|+|+|++|++|+.||+
T Consensus 210 ~~~~~~~-----------------~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~ 272 (380)
T 3iz6_a 210 SLSINSL-----------------NANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT 272 (380)
T ss_dssp EEEECSS-----------------SCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC
T ss_pred EEEeecC-----------------CCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe
Confidence 9999763 46789999999999999998 45778889999999999999999999999999999
Q ss_pred EEEEeCCCCccceeecccc-------ceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 358 LRVWDTANKRNMKTLEAHS-------HFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 358 i~vwd~~~~~~~~~l~~h~-------~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
|++||+.+++.+..+..+. ..|++++|+|++++|++|+.||.|++||+
T Consensus 273 i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~ 327 (380)
T 3iz6_a 273 CRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDT 327 (380)
T ss_dssp EEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEET
T ss_pred EEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEEC
Confidence 9999999998887775442 24899999999999999999999999996
No 64
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=321.81 Aligned_cols=289 Identities=21% Similarity=0.312 Sum_probs=247.4
Q ss_pred eEEeccCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEe-------------cccccCeeeEEECC-CCCEE
Q psy226 99 KFALSGHRSPVIKVIFHP-VFSLMASCSEDATIRLWDYETGEYERAL-------------HGHLDSVQDIAFDQ-SGKLL 163 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p-~~~~latgs~dg~v~vwd~~~~~~~~~~-------------~~h~~~V~~l~~~~-~g~~l 163 (406)
...+.+|.++|++++|+| ++++||+|+.||.|++||+.+++....+ .+|...|.+++|+| ++.+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 346778999999999999 9999999999999999999987644333 25999999999999 77899
Q ss_pred EEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCC---CEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEE
Q psy226 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS---DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240 (406)
Q Consensus 164 ~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~ 240 (406)
++|+.|+.|++||+.+++....+. +...+.++.|+|.+ .++++++.|+.|++||+.++..+..+.+|...|.+++|
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred EEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 999999999999999998887776 77889999999854 49999999999999999999999999999999999999
Q ss_pred CCCCC-EEEEEeCCCeEEEEeCCCcc-ceeEE---------------ecCCceEEEEEeCCCCCccccccccCCCCCCCC
Q psy226 241 SPDGT-LLASCSNDHTARVWSLATKE-TKAEL---------------RGHDHTVECVAWAPGVASESISEAAGRPPGQGG 303 (406)
Q Consensus 241 ~~~~~-~l~s~~~d~~v~vwd~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (406)
+|++. ++++|+.||.|++||+++.. ....+ ..|...|.+++|+| +
T Consensus 195 ~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------------~ 256 (408)
T 4a11_B 195 SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS------------------D 256 (408)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT------------------T
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC------------------C
Confidence 99998 58999999999999998764 23333 57888999999998 4
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-----cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccce
Q psy226 304 GPYLATGSRDKTIKLWDVGSGSLLFTLIGHD-----NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378 (406)
Q Consensus 304 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~-----~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~ 378 (406)
+.+|++++.|+.|++||+.+++....+.++. ..+........+..+++++.|+.|++||+.+++.+..+.+|...
T Consensus 257 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 336 (408)
T 4a11_B 257 GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKT 336 (408)
T ss_dssp SSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSC
T ss_pred CCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCe
Confidence 7789999999999999999887655443321 11222222334556677788999999999999999999999999
Q ss_pred EEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 379 VTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 379 v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|++++|+|++++|++|+.||.|++||++
T Consensus 337 v~~~~~s~~~~~l~s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 337 VDCCVFQSNFQELYSGSRDCNILAWVPS 364 (408)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEEEC
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEeCC
Confidence 9999999999999999999999999974
No 65
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.8e-43 Score=321.61 Aligned_cols=263 Identities=24% Similarity=0.402 Sum_probs=214.5
Q ss_pred EEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEecCCcceEEEEEec--CCCEEEEEeCCCcEEEE
Q psy226 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ--CLKTMQGHDHNVTGVAFLP--NSDFVLSASRDKTIKMW 217 (406)
Q Consensus 142 ~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p--~~~~l~s~s~d~~i~iw 217 (406)
..+.+|.+.|++++|+|+|++|++|+.|++|++||+.+++ ++..+.+|...|.+++|+| ++++|++|+.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 3457899999999999999999999999999999998764 4678899999999999986 48899999999999999
Q ss_pred EcCCC--eEEEEeecCCccEEEEEECCC--CCEEEEEeCCCeEEEEeCCCccc---eeEEecCCceEEEEEeCCCCCccc
Q psy226 218 EVATG--YCVKTLTGHREWVRQIKVSPD--GTLLASCSNDHTARVWSLATKET---KAELRGHDHTVECVAWAPGVASES 290 (406)
Q Consensus 218 d~~~~--~~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~v~vwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~ 290 (406)
|++++ .....+.+|...|.+++|+|+ +.+|++|+.|++|++||+..... ...+.+|...+.++.|+|......
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99887 466778899999999999998 88999999999999999986532 345568889999999998642111
Q ss_pred cccccCCCCCCCCCCEEEEEeCCCcEEEEECCCC---eEEEEEeCCCcCEEEEEEcCCC----CEEEEEeCCCeEEEEeC
Q psy226 291 ISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG---SLLFTLIGHDNWVRGVTFHPGG----KYLVSCGDDKTLRVWDT 363 (406)
Q Consensus 291 ~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~---~~~~~~~~h~~~v~~l~~s~~g----~~l~sgs~d~~i~vwd~ 363 (406)
..... .......+.+|++|+.|+.|++||++.+ +++..+.+|..+|.+++|+|++ ++|++|+.|++|++||+
T Consensus 167 ~~~~~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 167 LIDHP-SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp ----C-CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred ccccc-cccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 10000 0000112568999999999999999765 4677889999999999999987 89999999999999998
Q ss_pred CCCc----cceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 364 ANKR----NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 364 ~~~~----~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.+.. ....+..|...|.+++|+|++++||+|+.||+|++|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp SSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred cCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 7631 23456778889999999999999999999999999985
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.8e-42 Score=318.47 Aligned_cols=273 Identities=14% Similarity=0.173 Sum_probs=246.2
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc---EEEEecccccCeeeEEECCCCC-EEEEEeCCCcEEEEeC
Q psy226 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE---YERALHGHLDSVQDIAFDQSGK-LLVSCSADMSLKLWDM 177 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~---~~~~~~~h~~~V~~l~~~~~g~-~l~sgs~d~~i~vwd~ 177 (406)
..+|.++|++++|+|++.+|++|+.||.|++||+.+++ ....+.+|...|.+++|+|+++ +|++|+.|+.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 35899999999999999999999999999999998877 3445568999999999999999 9999999999999999
Q ss_pred -CCCeEEEEEec--CCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC---------CeEEEEeecCCccEEEEEECCCCC
Q psy226 178 -STYQCLKTMQG--HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT---------GYCVKTLTGHREWVRQIKVSPDGT 245 (406)
Q Consensus 178 -~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~---------~~~~~~~~~~~~~v~~l~~~~~~~ 245 (406)
.+++. ..+.+ |...|.+++|+| ++++++++.|+.|++||+++ +.++..+. |...|.+++|+|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-
Confidence 87764 67788 999999999999 99999999999999999987 76666666 88999999999988
Q ss_pred EEEEEeCCCeEEEEeCCC-cc--ceeEEecCCceEEEEEeCC-CCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEEC
Q psy226 246 LLASCSNDHTARVWSLAT-KE--TKAELRGHDHTVECVAWAP-GVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDV 321 (406)
Q Consensus 246 ~l~s~~~d~~v~vwd~~~-~~--~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~ 321 (406)
+++++.|+.|++||+++ .. .......|...+.+++|+| + +.++++++.||.|++||+
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~------------------~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE------------------QEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG------------------GCEEEEEETTSEEEEEEC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC------------------CCEEEEEecCCcEEEEEE
Confidence 99999999999999987 44 3345557888999999987 4 568999999999999999
Q ss_pred CCC------eEEEEEeCCCc---------CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc-cceEEEEEEe
Q psy226 322 GSG------SLLFTLIGHDN---------WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH-SHFVTSLDFH 385 (406)
Q Consensus 322 ~~~------~~~~~~~~h~~---------~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h-~~~v~~l~~~ 385 (406)
... +....+.+|.. .|.+++|+|++++|++|+.||.|++||+.+++.+.++..| ...|.+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~-- 301 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA-- 301 (342)
T ss_dssp CTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--
T ss_pred cCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--
Confidence 876 77788888865 9999999999999999999999999999999999999998 99999999
Q ss_pred CCCCEEEEeeCCCe
Q psy226 386 RAHPYVVTGSVDKT 399 (406)
Q Consensus 386 ~~~~~l~sgs~Dg~ 399 (406)
|++.+|++|+.||.
T Consensus 302 ~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 302 CSDNILCLATSDDT 315 (342)
T ss_dssp ECSSEEEEEEECTH
T ss_pred CCCCeEEEEecCCc
Confidence 99999999999998
No 67
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=3.3e-43 Score=322.05 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=211.9
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--EEEEecccccCeeeEEECC--CCCEEEEEeCCCcEEEEe
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE--YERALHGHLDSVQDIAFDQ--SGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~--~~~~~~~h~~~V~~l~~~~--~g~~l~sgs~d~~i~vwd 176 (406)
.+.+|.++|++++|+|++++||+|+.|++|+|||+.++. ....+.+|.+.|.+++|++ ++++|++|+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 467999999999999999999999999999999998875 4567899999999999986 489999999999999999
Q ss_pred CCCC--eEEEEEecCCcceEEEEEecC--CCEEEEEeCCCcEEEEEcCCCe---EEEEeecCCccEEEEEECCC------
Q psy226 177 MSTY--QCLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTIKMWEVATGY---CVKTLTGHREWVRQIKVSPD------ 243 (406)
Q Consensus 177 ~~~~--~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~~~~~v~~l~~~~~------ 243 (406)
+.++ +....+.+|...|.+++|+|+ +.+|++|+.|++|++||+.++. ....+.+|...|.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 167 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSL 167 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC---
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccc
Confidence 9876 466778899999999999998 7899999999999999998763 23456789999999999997
Q ss_pred -----------CCEEEEEeCCCeEEEEeCCCc---cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE
Q psy226 244 -----------GTLLASCSNDHTARVWSLATK---ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT 309 (406)
Q Consensus 244 -----------~~~l~s~~~d~~v~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 309 (406)
+.+|++|+.|++|++||++.. .....+.+|...|.+++|+|+.. ..+.+|++
T Consensus 168 ~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~--------------~~~~~las 233 (316)
T 3bg1_A 168 IDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG--------------LPTSTIAS 233 (316)
T ss_dssp ---CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS--------------CSCCEEEE
T ss_pred cccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC--------------CCCceEEE
Confidence 478999999999999999754 35567889999999999998521 12368999
Q ss_pred EeCCCcEEEEECCCC---e-EEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy226 310 GSRDKTIKLWDVGSG---S-LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 310 ~~~d~~i~lwd~~~~---~-~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~ 364 (406)
|+.|++|++||+.+. . ....+.+|...|.+++|+|+|++|++|+.|++|++|+..
T Consensus 234 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 234 CSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999998762 1 123446788999999999999999999999999999975
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-41 Score=319.28 Aligned_cols=240 Identities=30% Similarity=0.541 Sum_probs=219.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
..|.+++|+|++++||+|+.||+|++||+.+++....+.+|...|.+++|+|++++|++|+.|++|++||+.++++...+
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999887777
Q ss_pred ecCCcceEEEEEec-CCCEEEEEeCCCcEEEEEcCCCeEEEEe-------ecCCccEEEEEECCCCCEEEEEeCCCeEEE
Q psy226 187 QGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATGYCVKTL-------TGHREWVRQIKVSPDGTLLASCSNDHTARV 258 (406)
Q Consensus 187 ~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~iwd~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~l~s~~~d~~v~v 258 (406)
. +...+.+++|+| ++.+|++|+.|++|++||++++..+..+ .+|...|.+++|+|+|++|++|+.|++|++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 5 566899999999 8899999999999999999999887776 579999999999999999999999999999
Q ss_pred EeCCCcc------------ceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeE
Q psy226 259 WSLATKE------------TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSL 326 (406)
Q Consensus 259 wd~~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 326 (406)
||+++.. ....+.+|...|.+++|+| ++.+|++|+.|+.|++||+.++++
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~------------------~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ------------------NDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECG------------------GGCEEEEEETTSEEEEEETTTCCE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC------------------CCCEEEEEeCCCeEEEEECCCCeE
Confidence 9997532 3456778999999999987 467899999999999999999999
Q ss_pred EEEEeCCCcCEEEEEEcC------CCCEEEEEeCCCeEEEEeCCC
Q psy226 327 LFTLIGHDNWVRGVTFHP------GGKYLVSCGDDKTLRVWDTAN 365 (406)
Q Consensus 327 ~~~~~~h~~~v~~l~~s~------~g~~l~sgs~d~~i~vwd~~~ 365 (406)
+..+.+|.+.|.+++|+| ++++|++|+.||+|+||++..
T Consensus 345 ~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 345 LLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 999999999999999986 688999999999999999754
No 69
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.3e-41 Score=309.02 Aligned_cols=250 Identities=32% Similarity=0.571 Sum_probs=229.6
Q ss_pred cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy226 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218 (406)
Q Consensus 139 ~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd 218 (406)
.....+.+|...|++++|+|+|++|++|+.|+.|++|++.+++....+.+|...|.+++|+|++++|++|+.|+.|++||
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 45567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCC
Q psy226 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRP 298 (406)
Q Consensus 219 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 298 (406)
+.++.++..+.+|...|.+++|+|++++|++|+.|+.|++||+++.+....+..|..+|.++.|+|
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-------------- 159 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-------------- 159 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT--------------
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC--------------
Confidence 999999999999999999999999999999999999999999999998999999999999999998
Q ss_pred CCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccc
Q psy226 299 PGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI-GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377 (406)
Q Consensus 299 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~ 377 (406)
++.++++|+.|+.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||+.+++.+..+.+|..
T Consensus 160 ----~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 235 (312)
T 4ery_A 160 ----DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 235 (312)
T ss_dssp ----TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCC
T ss_pred ----CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCC
Confidence 46789999999999999999999887765 4567899999999999999999999999999999999888888765
Q ss_pred eE---EEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 378 FV---TSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 378 ~v---~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
.+ ......+++.+|++|+.||.|++||++
T Consensus 236 ~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 236 EKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp SSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred ceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 43 222334678899999999999999974
No 70
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-41 Score=350.85 Aligned_cols=301 Identities=12% Similarity=0.151 Sum_probs=245.6
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q psy226 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ 181 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~ 181 (406)
...|..+|.+++|+| +.+|++++.|++|++||+.+++....+. |...|++++|+|++++|++|+.||+|++||+.+++
T Consensus 54 ~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~ 131 (902)
T 2oaj_A 54 KLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQ 131 (902)
T ss_dssp ECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTE
T ss_pred EcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCc
Confidence 345889999999999 8899999999999999999999888775 67899999999999999999999999999999887
Q ss_pred EE-----------EEEecCCcceEEEEEecC-CCEEEEEeCCCcEEEEEcCCCeEEEEeecC------------------
Q psy226 182 CL-----------KTMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVATGYCVKTLTGH------------------ 231 (406)
Q Consensus 182 ~~-----------~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~------------------ 231 (406)
+. ..+.+|...|.+++|+|+ +..+++|+.|++| +||++++.++..+..|
T Consensus 132 ~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h 210 (902)
T 2oaj_A 132 LSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKR 210 (902)
T ss_dssp EEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCB
T ss_pred cccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCccccccccccc
Confidence 54 223578899999999996 4689999999999 9999999998888766
Q ss_pred CccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeE--E---ec-------------CCceEEEEEeC----CCC---
Q psy226 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE--L---RG-------------HDHTVECVAWA----PGV--- 286 (406)
Q Consensus 232 ~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~--~---~~-------------~~~~v~~~~~~----~~~--- 286 (406)
...|.+++|+|+|.+|++|+.|++|++||+++++.+.. + .. |...|.+++|+ |+.
T Consensus 211 ~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~l 290 (902)
T 2oaj_A 211 TPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSL 290 (902)
T ss_dssp CCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEE
T ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEE
Confidence 57799999999999999999999999999988766542 1 11 23468888884 210
Q ss_pred -----Ccc-----cc---c----------------------------------------------------c--------
Q psy226 287 -----ASE-----SI---S----------------------------------------------------E-------- 293 (406)
Q Consensus 287 -----~~~-----~~---~----------------------------------------------------~-------- 293 (406)
... .+ . .
T Consensus 291 l~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~ 370 (902)
T 2oaj_A 291 LISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLI 370 (902)
T ss_dssp EEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEE
T ss_pred EEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEE
Confidence 000 00 0 0
Q ss_pred -----------ccCC---C----------------------------------------------------CCCCCCCEE
Q psy226 294 -----------AAGR---P----------------------------------------------------PGQGGGPYL 307 (406)
Q Consensus 294 -----------~~~~---~----------------------------------------------------~~~~~~~~l 307 (406)
..+. . ...+++.+|
T Consensus 371 s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~l 450 (902)
T 2oaj_A 371 LGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAF 450 (902)
T ss_dssp ETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEE
T ss_pred cCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEE
Confidence 0000 0 001246789
Q ss_pred EEEeCCCcEEEEECCCCeE----EEE--Ee-----CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---------
Q psy226 308 ATGSRDKTIKLWDVGSGSL----LFT--LI-----GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR--------- 367 (406)
Q Consensus 308 ~s~~~d~~i~lwd~~~~~~----~~~--~~-----~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~--------- 367 (406)
++|+.|++||+||+.++.. ... +. +|...|.+|+|+|+|++||+|+.||+|+|||+.+++
T Consensus 451 aSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~ 530 (902)
T 2oaj_A 451 ITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPE 530 (902)
T ss_dssp EEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC--------
T ss_pred EEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCC
Confidence 9999999999999987642 111 12 789999999999999999999999999999987652
Q ss_pred ------------------------------------cceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 368 ------------------------------------NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 368 ------------------------------------~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
++.++.+|.+.|++|+|+|+| +||+|+.||+|+|||++
T Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~ 604 (902)
T 2oaj_A 531 SGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRR 604 (902)
T ss_dssp -------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETT
T ss_pred CcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECC
Confidence 356778899999999999999 99999999999999963
No 71
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.5e-41 Score=309.59 Aligned_cols=254 Identities=27% Similarity=0.512 Sum_probs=217.2
Q ss_pred EEEEecccccCeeeEEE-----CC-CCCEEEEEeCCCcEEEEeCCC-------CeEEEEEecCCcceEEEEEecCCCEEE
Q psy226 140 YERALHGHLDSVQDIAF-----DQ-SGKLLVSCSADMSLKLWDMST-------YQCLKTMQGHDHNVTGVAFLPNSDFVL 206 (406)
Q Consensus 140 ~~~~~~~h~~~V~~l~~-----~~-~g~~l~sgs~d~~i~vwd~~~-------~~~~~~~~~h~~~v~~~~~~p~~~~l~ 206 (406)
....+.+|.+.|++++| ++ ++++|++|+.|++|++||+.+ +.+...+.+|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 45678899999999999 76 899999999999999999864 346678899999999999999999999
Q ss_pred EEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEe---cCCceEEEEEeC
Q psy226 207 SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR---GHDHTVECVAWA 283 (406)
Q Consensus 207 s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~---~~~~~v~~~~~~ 283 (406)
+|+.|++|++||++++.++..+.+|...|.+++|+|++++|++|+.|++|++||+.... ..... +|...|.++.|+
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEEC
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeec
Confidence 99999999999999999999999999999999999999999999999999999997432 22222 688899999999
Q ss_pred CCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy226 284 PGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363 (406)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~ 363 (406)
|...... ...+.+.++++++.|+.|++|| ..++....+.+|...|.+++|+|+|++|++|+.||.|++||+
T Consensus 172 ~~~~~~~--------~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 172 PIMKSAN--------KVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp CCCCSCS--------CCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred ccccccc--------ccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 8642210 1112357899999999999999 456778889999999999999999999999999999999999
Q ss_pred CC-CccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 364 AN-KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 364 ~~-~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.. ......+. +...|.+++|+|++.+|++| .|+.|++|++
T Consensus 243 ~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~ 283 (343)
T 2xzm_R 243 LNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNL 283 (343)
T ss_dssp SCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEES
T ss_pred CCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEe
Confidence 44 44444443 45579999999999988755 5888999986
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7.2e-41 Score=333.14 Aligned_cols=286 Identities=19% Similarity=0.316 Sum_probs=245.1
Q ss_pred eEEeccCCC---CeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEEe-c---ccccCeeeEEECCCCCEEEEEeCCC
Q psy226 99 KFALSGHRS---PVIKVIFHPV-FSLMASCSEDATIRLWDYETGEYERAL-H---GHLDSVQDIAFDQSGKLLVSCSADM 170 (406)
Q Consensus 99 ~~~l~~h~~---~V~~v~~~p~-~~~latgs~dg~v~vwd~~~~~~~~~~-~---~h~~~V~~l~~~~~g~~l~sgs~d~ 170 (406)
...+.+|.. +|++++|+|+ +++|++|+.||.|++||+.+++....+ . +|...|.+++|+ ++.+|++++.|+
T Consensus 196 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~ 274 (615)
T 1pgu_A 196 SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADA 274 (615)
T ss_dssp EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTS
T ss_pred eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCC
Confidence 345778999 9999999999 999999999999999999999998888 6 899999999999 999999999999
Q ss_pred cEEEEeCCCCeEEEEEecC----CcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCC---
Q psy226 171 SLKLWDMSTYQCLKTMQGH----DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD--- 243 (406)
Q Consensus 171 ~i~vwd~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~--- 243 (406)
.|++||+.+++.+..+..+ ...+.++.|. +++++++++.|+.|++||+.++..+..+.+|...|.+++| |+
T Consensus 275 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~ 352 (615)
T 1pgu_A 275 TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLIS 352 (615)
T ss_dssp EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEE
T ss_pred cEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEE
Confidence 9999999999999888877 3678888885 8899999999999999999998888888777766666655 43
Q ss_pred ------------------------------CCEEEEEeCCCeEEEEeCC-------------------------------
Q psy226 244 ------------------------------GTLLASCSNDHTARVWSLA------------------------------- 262 (406)
Q Consensus 244 ------------------------------~~~l~s~~~d~~v~vwd~~------------------------------- 262 (406)
+..+++++.|+.+++||+.
T Consensus 353 ~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (615)
T 1pgu_A 353 GSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLIL 432 (615)
T ss_dssp EETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEE
T ss_pred ECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEE
Confidence 4455555555555555543
Q ss_pred -------------------------------------------Cccce-eEEecCCceEEEEEeCCCCCccccccccCCC
Q psy226 263 -------------------------------------------TKETK-AELRGHDHTVECVAWAPGVASESISEAAGRP 298 (406)
Q Consensus 263 -------------------------------------------~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 298 (406)
+.... ..+..|...|.+++|+|
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-------------- 498 (615)
T 1pgu_A 433 QSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISP-------------- 498 (615)
T ss_dssp ETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECT--------------
T ss_pred eccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECC--------------
Confidence 22211 23344555666666665
Q ss_pred CCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCEEEEEEcC----------CCCEEEEEeCCCeEEEEeCCCC-
Q psy226 299 PGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTFHP----------GGKYLVSCGDDKTLRVWDTANK- 366 (406)
Q Consensus 299 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-h~~~v~~l~~s~----------~g~~l~sgs~d~~i~vwd~~~~- 366 (406)
++.+|++++.|+.|++||+.+++++..+.+ |...|++++|+| ++++|++|+.||.|++||+.++
T Consensus 499 ----~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 574 (615)
T 1pgu_A 499 ----SETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM 574 (615)
T ss_dssp ----TSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT
T ss_pred ----CCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc
Confidence 578999999999999999999999999988 999999999999 9999999999999999999987
Q ss_pred ccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 367 ~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+.+..+.+|...|++++|+|+++ |++++.||.|++|++.
T Consensus 575 ~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 575 KIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp CCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred eechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 78888999999999999999999 9999999999999974
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-40 Score=319.85 Aligned_cols=279 Identities=24% Similarity=0.387 Sum_probs=250.4
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEEC--CCCCEEEEEeCCCcEEEEe
Q psy226 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD--QSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~--~~g~~l~sgs~d~~i~vwd 176 (406)
...+.+|.++|++++|+|++ +|++|+.||+|++||+.+++....+.+|...|.+++|+ +++.+|++|+.|++|++||
T Consensus 155 ~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 155 LLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp EEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred EEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 44578999999999999988 99999999999999999999999999999999999998 5789999999999999999
Q ss_pred CCCCe-----------------------EEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCc
Q psy226 177 MSTYQ-----------------------CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233 (406)
Q Consensus 177 ~~~~~-----------------------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 233 (406)
+.+.. ....+.+|...|.++ +++++++++|+.|++|++||+.++.++..+.+|..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 311 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD 311 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC
Confidence 98654 255778898888876 57789999999999999999999999999999999
Q ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC
Q psy226 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD 313 (406)
Q Consensus 234 ~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 313 (406)
.|.+++|+|+++++++|+.|+.|++||+.+++.+..+.+|...|.++.|++ .++++|+.|
T Consensus 312 ~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--------------------~~l~s~s~d 371 (464)
T 3v7d_B 312 RIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD--------------------KFLVSAAAD 371 (464)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS--------------------SEEEEEETT
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC--------------------CEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999864 479999999
Q ss_pred CcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccee-eccccceEEEEEEeCCCCEEE
Q psy226 314 KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKT-LEAHSHFVTSLDFHRAHPYVV 392 (406)
Q Consensus 314 ~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~-l~~h~~~v~~l~~~~~~~~l~ 392 (406)
|.|++||+.++....... |...+..++|+|++++|++|+ ||.|++||+.+++.+.. +..|...|.+++|+ ...+++
T Consensus 372 g~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~ 448 (464)
T 3v7d_B 372 GSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVA 448 (464)
T ss_dssp SEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEE
T ss_pred CcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEE
Confidence 999999999988766654 666788899999999999999 89999999999998876 57788999999998 445667
Q ss_pred EeeCCCeEEEe
Q psy226 393 TGSVDKTVKVW 403 (406)
Q Consensus 393 sgs~Dg~v~iw 403 (406)
+++.||.+.+|
T Consensus 449 ~~~~~g~~~i~ 459 (464)
T 3v7d_B 449 AVEKDGQSFLE 459 (464)
T ss_dssp EEEETTEEEEE
T ss_pred EEEeCCeEEEE
Confidence 77778876555
No 74
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7.1e-42 Score=315.27 Aligned_cols=292 Identities=17% Similarity=0.250 Sum_probs=227.7
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC----cEEEEecccccCeeeEEECC--CCCEEEEEeCCCcEEE
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG----EYERALHGHLDSVQDIAFDQ--SGKLLVSCSADMSLKL 174 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~----~~~~~~~~h~~~V~~l~~~~--~g~~l~sgs~d~~i~v 174 (406)
.+.+|.++|++++|+|++++||+|+.||+|++||+.++ +....+.+|...|.+++|+| ++.+|++|+.|++|++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 57899999999999999999999999999999999876 46677889999999999999 6999999999999999
Q ss_pred EeCCCC---------eEEEEEecCCcceEEEEEecC--CCEEEEEeCCCcEEEEEcCCCeEEEEee-------------c
Q psy226 175 WDMSTY---------QCLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTIKMWEVATGYCVKTLT-------------G 230 (406)
Q Consensus 175 wd~~~~---------~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------------~ 230 (406)
||+.++ +.+..+.+|...|.+++|+|+ +.++++++.|+.|++||++++..+..+. +
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 999876 667888999999999999999 9999999999999999998876543332 5
Q ss_pred CCccEEEEEECCC---CCEEEEEeCCCeEEEEeCCCccc--eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCC
Q psy226 231 HREWVRQIKVSPD---GTLLASCSNDHTARVWSLATKET--KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGP 305 (406)
Q Consensus 231 ~~~~v~~l~~~~~---~~~l~s~~~d~~v~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
|...+.+++|+|+ +.++++++.|+.+.+|+...... ...+.+|...|.+++|+|+... .+.
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~--------------~~~ 231 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGR--------------WYQ 231 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSC--------------SSE
T ss_pred cccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCC--------------cce
Confidence 7788999999997 99999999999998888776654 6677789999999999984100 016
Q ss_pred EEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEe----CCCeEEEEeCCCCccceeeccccceEEE
Q psy226 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG----DDKTLRVWDTANKRNMKTLEAHSHFVTS 381 (406)
Q Consensus 306 ~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs----~d~~i~vwd~~~~~~~~~l~~h~~~v~~ 381 (406)
+|++|+.|+.|++||++.+........+...+....+++....+..+. ....+.+|+....+.+..+.+|...|++
T Consensus 232 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 311 (351)
T 3f3f_A 232 LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWS 311 (351)
T ss_dssp EEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEE
T ss_pred EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEE
Confidence 899999999999999988766555544444444555555554444443 4455667777777888889999999999
Q ss_pred EEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 382 LDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 382 l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
++|+|++++|++|+.||.|++|++.
T Consensus 312 ~~~s~~~~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 312 VSWNLTGTILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp EEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEcCCCCEEEEecCCCcEEEEecC
Confidence 9999999999999999999999963
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=315.54 Aligned_cols=289 Identities=21% Similarity=0.315 Sum_probs=243.2
Q ss_pred ceEEeccCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEcCC-CcEE-EEecccccCeeeEEECCCCCEEEEEeCCCcE
Q psy226 98 EKFALSGHRSPVIKVIFHPV---FSLMASCSEDATIRLWDYET-GEYE-RALHGHLDSVQDIAFDQSGKLLVSCSADMSL 172 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~---~~~latgs~dg~v~vwd~~~-~~~~-~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i 172 (406)
....+.+|.++|++++|+|+ +++|++|+.||.|++||+.+ +... ..+.+|...|.+++|+|++++|++|+.|+.|
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v 110 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTA 110 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcE
Confidence 34467899999999999999 59999999999999999997 5444 7788999999999999999999999999999
Q ss_pred EEEeCCCCeEEEEEecCCcceEEEEE--ecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEE
Q psy226 173 KLWDMSTYQCLKTMQGHDHNVTGVAF--LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASC 250 (406)
Q Consensus 173 ~vwd~~~~~~~~~~~~h~~~v~~~~~--~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~ 250 (406)
++||+.+++.+. +.+|...|.+++| +|++.+|++++.|+.|++||++++..+..+..+. .+.++.+. +..++++
T Consensus 111 ~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~ 186 (368)
T 3mmy_A 111 KMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVA 186 (368)
T ss_dssp EEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEE
T ss_pred EEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEE
Confidence 999999988765 6679999999999 8889999999999999999999999888888775 45555555 4588999
Q ss_pred eCCCeEEEEeCCCccceeEEe--cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCC---e
Q psy226 251 SNDHTARVWSLATKETKAELR--GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG---S 325 (406)
Q Consensus 251 ~~d~~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~---~ 325 (406)
+.|+.+++|++.......... .+...+.++.+.+.... ....+++++.|+.|++||++.. .
T Consensus 187 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~dg~i~i~~~~~~~~~~ 252 (368)
T 3mmy_A 187 TAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN--------------KPTGFALGSIEGRVAIHYINPPNPAK 252 (368)
T ss_dssp EGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS--------------CEEEEEEEETTSEEEEEESSCSCHHH
T ss_pred eCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCC--------------CCCeEEEecCCCcEEEEecCCCCccc
Confidence 999999999998754432221 23344445544432110 1234999999999999999887 5
Q ss_pred EEEEEeCCCc------------CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEE
Q psy226 326 LLFTLIGHDN------------WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVT 393 (406)
Q Consensus 326 ~~~~~~~h~~------------~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~s 393 (406)
.+..+.+|.. .|++++|+|++++|++|+.||.|++||+.+++.+..+..|...|++++|+|++++|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 253 DNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAY 332 (368)
T ss_dssp HSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEE
T ss_pred cceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEE
Confidence 5677888876 7999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCeEEEee
Q psy226 394 GSVDKTVKVWE 404 (406)
Q Consensus 394 gs~Dg~v~iw~ 404 (406)
|+.|+..+.|+
T Consensus 333 ~s~d~~~~~~~ 343 (368)
T 3mmy_A 333 ASSYDWSKGHE 343 (368)
T ss_dssp EECCCSTTCGG
T ss_pred Eeccccccccc
Confidence 99998655544
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.7e-41 Score=345.50 Aligned_cols=183 Identities=15% Similarity=0.150 Sum_probs=162.1
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
....||.++|++++|+|++.+||+|+.||+|+|||..+++....+ .|...|.+++|+| |++|++++.|++|++||+.+
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 345699999999999999999999999999999999887765544 4788999999999 88999999999999999999
Q ss_pred CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEE-----------EEeecCCccEEEEEECCC-CCEE
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV-----------KTLTGHREWVRQIKVSPD-GTLL 247 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~-----------~~~~~~~~~v~~l~~~~~-~~~l 247 (406)
++++..+. |...|++++|+|++++|++|+.||+|++||+.++.+. ..+.+|...|.+++|+|+ +..+
T Consensus 89 ~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l 167 (902)
T 2oaj_A 89 QKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTV 167 (902)
T ss_dssp CSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEE
T ss_pred CcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEE
Confidence 99888886 6789999999999999999999999999999988754 234678999999999996 5789
Q ss_pred EEEeCCCeEEEEeCCCccceeEEecC------------------CceEEEEEeCCCC
Q psy226 248 ASCSNDHTARVWSLATKETKAELRGH------------------DHTVECVAWAPGV 286 (406)
Q Consensus 248 ~s~~~d~~v~vwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~ 286 (406)
++|+.|+.| +||+++.+....+..| ...|.+++|+|+.
T Consensus 168 ~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg 223 (902)
T 2oaj_A 168 LISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS 223 (902)
T ss_dssp EEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS
T ss_pred EEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC
Confidence 999999999 9999998887777665 4679999999963
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.3e-40 Score=331.37 Aligned_cols=281 Identities=15% Similarity=0.248 Sum_probs=260.0
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC----cEEEEecccccC-eeeEEECC--CCCEEEEEeCCCcEEEEe
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG----EYERALHGHLDS-VQDIAFDQ--SGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~----~~~~~~~~h~~~-V~~l~~~~--~g~~l~sgs~d~~i~vwd 176 (406)
.|.+.|++++|+|++++||+++ ++.|++||+.++ +....+.+|... |++++|+| ++++|++|+.||+|++||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 6889999999999999999998 889999999998 888999999999 99999999 999999999999999999
Q ss_pred CCCC--------eEEEEEecCCcceEEEEEecCCCEEEEEeCC----CcEEEEEcCCCeEEEEeecCCccEEEEEECCCC
Q psy226 177 MSTY--------QCLKTMQGHDHNVTGVAFLPNSDFVLSASRD----KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244 (406)
Q Consensus 177 ~~~~--------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~ 244 (406)
+.++ +....+..|...|.+++|+|++++|++++.+ +.|++|| ++..+..+.+|...|.+++|+|++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~ 172 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSR 172 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCC
Confidence 9744 6778888999999999999999999999988 6888888 667888999999999999999999
Q ss_pred C-EEEEEeCCCeEEEEeCCCccceeEEecCCc---eEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEE
Q psy226 245 T-LLASCSNDHTARVWSLATKETKAELRGHDH---TVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWD 320 (406)
Q Consensus 245 ~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd 320 (406)
. ++++++.|+.|++||+.+.+....+.+|.. .|.+++|+|+ ++.++++++.|+.|++||
T Consensus 173 ~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~~~l~~~~~dg~i~vwd 235 (615)
T 1pgu_A 173 PMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPD-----------------SGEFVITVGSDRKISCFD 235 (615)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECST-----------------TCCEEEEEETTCCEEEEE
T ss_pred CcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCC-----------------CCCEEEEEeCCCeEEEEE
Confidence 8 899999999999999999999999999999 9999999983 267899999999999999
Q ss_pred CCCCeEEEEE-e---CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc----cceEEEEEEeCCCCEEE
Q psy226 321 VGSGSLLFTL-I---GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH----SHFVTSLDFHRAHPYVV 392 (406)
Q Consensus 321 ~~~~~~~~~~-~---~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h----~~~v~~l~~~~~~~~l~ 392 (406)
+.+++.+..+ . +|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+..+ ...+.++.|. ++.+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 313 (615)
T 1pgu_A 236 GKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRII 313 (615)
T ss_dssp TTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEE
T ss_pred CCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEE
Confidence 9999999998 6 899999999999 9999999999999999999999988888766 4678888886 889999
Q ss_pred EeeCCCeEEEeecC
Q psy226 393 TGSVDKTVKVWECR 406 (406)
Q Consensus 393 sgs~Dg~v~iw~~~ 406 (406)
+|+.||.|++||++
T Consensus 314 ~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 314 SLSLDGTLNFYELG 327 (615)
T ss_dssp EEETTSCEEEEETT
T ss_pred EEECCCCEEEEECC
Confidence 99999999999963
No 78
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.7e-39 Score=348.73 Aligned_cols=306 Identities=27% Similarity=0.461 Sum_probs=269.9
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECC--CCCEEEEEeCCCcEEEEe
Q psy226 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ--SGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~--~g~~l~sgs~d~~i~vwd 176 (406)
...+.+|.++|++++|+|++++||+|+.||+|+|||+.+++....+.+|...|.+++|+| ++.++++|+.|+.|++||
T Consensus 650 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd 729 (1249)
T 3sfz_A 650 LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWD 729 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEE
T ss_pred EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEE
Confidence 446789999999999999999999999999999999999999999999999999999999 456899999999999999
Q ss_pred CCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEe----------------------------
Q psy226 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL---------------------------- 228 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~---------------------------- 228 (406)
+.++++...+.+|...|.+++|+|+++++++|+.||+|++||+.++.....+
T Consensus 730 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d 809 (1249)
T 3sfz_A 730 LNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSAD 809 (1249)
T ss_dssp TTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTT
T ss_pred CCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCC
Confidence 9999999999999999999999999999999999999999999877544332
Q ss_pred ---------------------------ecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEE
Q psy226 229 ---------------------------TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281 (406)
Q Consensus 229 ---------------------------~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~ 281 (406)
.+|...|.+++|+|++.++++++.|+.|++||+.++.....+.+|...|.+++
T Consensus 810 g~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~ 889 (1249)
T 3sfz_A 810 GDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVM 889 (1249)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEE
Confidence 16778899999999999999999999999999999999999999999999999
Q ss_pred eCCCCCcccc---------ccc----------------------------------------------------cCCCCC
Q psy226 282 WAPGVASESI---------SEA----------------------------------------------------AGRPPG 300 (406)
Q Consensus 282 ~~~~~~~~~~---------~~~----------------------------------------------------~~~~~~ 300 (406)
|+|+...... ... ......
T Consensus 890 ~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 969 (1249)
T 3sfz_A 890 FSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCL 969 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEE
Confidence 9997421100 000 000012
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEE
Q psy226 301 QGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVT 380 (406)
Q Consensus 301 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~ 380 (406)
.+++.++++|+.||.|++||+.+++....+.+|...|++++|+|+|++|++++.||.|++||+.+++.. .+..|...|.
T Consensus 970 sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~~v~ 1048 (1249)
T 3sfz_A 970 SPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVK 1048 (1249)
T ss_dssp CTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEE-CCBCCSSCEE
T ss_pred cCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceE-EEecCCCcEE
Confidence 346789999999999999999999999999999999999999999999999999999999999988766 4557889999
Q ss_pred EEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 381 SLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 381 ~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+++|+|++ .+++++.||.|++||+.
T Consensus 1049 ~~~~~~~~-~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 1049 DFRLLQDS-RLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp EEEECSSS-EEEEEESSSEEEEEETT
T ss_pred EEEEcCCC-cEEEEECCCcEEEEECC
Confidence 99999965 57889999999999963
No 79
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-39 Score=305.15 Aligned_cols=251 Identities=22% Similarity=0.393 Sum_probs=222.1
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC--CCcEEEEecccccCeeeEEECCC--CCEEEEEeCCCcEEEE
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE--TGEYERALHGHLDSVQDIAFDQS--GKLLVSCSADMSLKLW 175 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~--~~~~~~~~~~h~~~V~~l~~~~~--g~~l~sgs~d~~i~vw 175 (406)
..+.+|.++|++++|+|++++||+|+.||.|+|||+. +++....+.+|...|++++|+++ +.+|++|+.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 3578999999999999999999999999999999998 55677788999999999999987 8999999999999999
Q ss_pred eCCCCe--EEEEEecCCcceEEEEEecC--CCEEEEEeCCCcEEEEEcCCC--eEEEEeecCCccEEEEEECC-------
Q psy226 176 DMSTYQ--CLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTIKMWEVATG--YCVKTLTGHREWVRQIKVSP------- 242 (406)
Q Consensus 176 d~~~~~--~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~------- 242 (406)
|+.+++ .+..+.+|...|.+++|+|+ +.++++++.|+.|++||+.++ .....+.+|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 999886 77788889999999999999 899999999999999999887 34556778999999999999
Q ss_pred ------CCCEEEEEeCCCeEEEEeCCCcc----ceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC
Q psy226 243 ------DGTLLASCSNDHTARVWSLATKE----TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR 312 (406)
Q Consensus 243 ------~~~~l~s~~~d~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 312 (406)
++.+|++|+.|+.|++||+++.. ....+.+|...|.+++|+|+. ..+.+|++++.
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~---------------~~~~~l~s~~~ 229 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------------LLRSYLASVSQ 229 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------------SSSEEEEEEET
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC---------------CCCCeEEEEeC
Confidence 69999999999999999998754 345677899999999999841 01678999999
Q ss_pred CCcEEEEECCCCe-----EEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy226 313 DKTIKLWDVGSGS-----LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365 (406)
Q Consensus 313 d~~i~lwd~~~~~-----~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~ 365 (406)
|+.|++||++++. .+.....|...|.+++|+|+|++|++++.||.|++||+..
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 9999999998863 2222334888999999999999999999999999999874
No 80
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-40 Score=306.27 Aligned_cols=262 Identities=24% Similarity=0.438 Sum_probs=223.1
Q ss_pred cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEecCCcceEEEEEecC--CCEEEEEeCCCcE
Q psy226 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS--TYQCLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTI 214 (406)
Q Consensus 139 ~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i 214 (406)
+....+.+|.+.|++++|+|++++|++|+.|+.|++||+. +++.+..+.+|...|.+++|+|+ +++|++|+.|+.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 4556788999999999999999999999999999999997 66778889999999999999977 8999999999999
Q ss_pred EEEEcCCCe--EEEEeecCCccEEEEEECCC--CCEEEEEeCCCeEEEEeCCCcc--ceeEEecCCceEEEEEeCCCCCc
Q psy226 215 KMWEVATGY--CVKTLTGHREWVRQIKVSPD--GTLLASCSNDHTARVWSLATKE--TKAELRGHDHTVECVAWAPGVAS 288 (406)
Q Consensus 215 ~iwd~~~~~--~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~ 288 (406)
++||+.++. .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.... ....+..|...|.++.|+|....
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999999987 77888899999999999999 9999999999999999998763 34567789999999999984221
Q ss_pred cccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe----EEEEEeCCCcCEEEEEEcCC---CCEEEEEeCCCeEEEE
Q psy226 289 ESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS----LLFTLIGHDNWVRGVTFHPG---GKYLVSCGDDKTLRVW 361 (406)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~----~~~~~~~h~~~v~~l~~s~~---g~~l~sgs~d~~i~vw 361 (406)
... ......++.++++|+.|+.|++||++++. +...+.+|...|.+++|+|+ +++|++++.||.|++|
T Consensus 162 ~~~-----~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iw 236 (379)
T 3jrp_A 162 EDG-----EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 236 (379)
T ss_dssp -------------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred ccc-----cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEE
Confidence 100 00011247799999999999999997654 55678899999999999999 8999999999999999
Q ss_pred eCCCCc-----cceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 362 DTANKR-----NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 362 d~~~~~-----~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
|+.++. .+.....|...|++++|+|++++|++++.||.|++|++
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred eCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 998763 22223348889999999999999999999999999986
No 81
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.5e-40 Score=313.07 Aligned_cols=278 Identities=22% Similarity=0.318 Sum_probs=239.1
Q ss_pred CeEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCc----EEEEecccccCeeeEEECC-CCCEEEEEeCCCcEEEEeCCCC-
Q psy226 108 PVIKVIFHPVFSL-MASCSEDATIRLWDYETGE----YERALHGHLDSVQDIAFDQ-SGKLLVSCSADMSLKLWDMSTY- 180 (406)
Q Consensus 108 ~V~~v~~~p~~~~-latgs~dg~v~vwd~~~~~----~~~~~~~h~~~V~~l~~~~-~g~~l~sgs~d~~i~vwd~~~~- 180 (406)
....++++|+... +++|+.||.|+|||+.... ....+.+|.+.|++++|+| ++++|++|+.||+|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCC
Confidence 3456889998754 4568999999999986642 2345778999999999999 8999999999999999999887
Q ss_pred ------eEEEEEecCCcceEEEEEecCC-CEEEEEeCCCcEEEEEcCCCeEEEEe--ecCCccEEEEEECCCCCEEEEEe
Q psy226 181 ------QCLKTMQGHDHNVTGVAFLPNS-DFVLSASRDKTIKMWEVATGYCVKTL--TGHREWVRQIKVSPDGTLLASCS 251 (406)
Q Consensus 181 ------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~iwd~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~s~~ 251 (406)
+.+..+.+|...|.+++|+|++ ++|++|+.|++|++||+.++..+..+ .+|...|.+++|+|++.+|++++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 5678899999999999999998 69999999999999999999999999 88999999999999999999999
Q ss_pred CCCeEEEEeCCCccceeEE-ecCCce-EEEEEeCCCCCccccccccCCCCCCCCCCEEEEE---eCCCcEEEEECCCCeE
Q psy226 252 NDHTARVWSLATKETKAEL-RGHDHT-VECVAWAPGVASESISEAAGRPPGQGGGPYLATG---SRDKTIKLWDVGSGSL 326 (406)
Q Consensus 252 ~d~~v~vwd~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~---~~d~~i~lwd~~~~~~ 326 (406)
.|+.|++||+++++....+ ..|... +.++.|+| ++.++++| +.|+.|++||++++..
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS------------------EGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS------------------TTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC------------------CCcEEEEeccCCCCceEEEEcCccccC
Confidence 9999999999998888888 688765 88899987 46788888 7899999999988654
Q ss_pred -EEE-EeCCCcCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCcc-ceeeccc--cceEEEEEEeCCCCEEEEeeCCCeE
Q psy226 327 -LFT-LIGHDNWVRGVTFHPGGKYLV-SCGDDKTLRVWDTANKRN-MKTLEAH--SHFVTSLDFHRAHPYVVTGSVDKTV 400 (406)
Q Consensus 327 -~~~-~~~h~~~v~~l~~s~~g~~l~-sgs~d~~i~vwd~~~~~~-~~~l~~h--~~~v~~l~~~~~~~~l~sgs~Dg~v 400 (406)
+.. ...|...+.+++|+|++++|+ +|+.||.|++||+.+++. +..+..| ...|.+++|+|++.++++ .|+.+
T Consensus 258 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~ 335 (402)
T 2aq5_A 258 PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIA 335 (402)
T ss_dssp CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEE
T ss_pred CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeE
Confidence 222 235777899999999999996 455799999999998874 5555544 578999999999998874 56799
Q ss_pred EEeec
Q psy226 401 KVWEC 405 (406)
Q Consensus 401 ~iw~~ 405 (406)
++|++
T Consensus 336 ~~~~l 340 (402)
T 2aq5_A 336 RFYKL 340 (402)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99986
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.6e-39 Score=329.23 Aligned_cols=288 Identities=27% Similarity=0.393 Sum_probs=255.2
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
....+.+|..+|.+++|+|++++|++|+.||.|++||+.+++....+.+|.+.|.+++|+|++++|++|+.||+|++||+
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEG
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEEC
Confidence 34567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-eEEEEEecCCcceEEEEEec-CCCEEEEEeCCCcEEEEEcCCCeEEEEeecCC-ccEEEEEECC--CCCEEEEEeC
Q psy226 178 STY-QCLKTMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATGYCVKTLTGHR-EWVRQIKVSP--DGTLLASCSN 252 (406)
Q Consensus 178 ~~~-~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-~~v~~l~~~~--~~~~l~s~~~ 252 (406)
.++ .....+.+|...|.+++|+| +++.+++++.|++|++||+.++.....+..+. ..+..++|+| ++.++++++.
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~ 206 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC
Confidence 876 77788899999999999999 78899999999999999998887777776655 8899999999 9999999999
Q ss_pred CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy226 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 332 (406)
||.|++||+.++.....+.+|...|.+++|+| ++.++++++.||.|++||+.+++.+..+..
T Consensus 207 dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~------------------~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~ 268 (814)
T 3mkq_A 207 DLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP------------------TLPIIISGSEDGTLKIWNSSTYKVEKTLNV 268 (814)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECS------------------SSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC------------------CCCEEEEEeCCCeEEEEECCCCcEEEEeec
Confidence 99999999999998999999999999999998 467899999999999999999999999999
Q ss_pred CCcCEEEEEEcCCCC--EEEEEeCCCeEEEEeCCCCccce----------------------------------------
Q psy226 333 HDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMK---------------------------------------- 370 (406)
Q Consensus 333 h~~~v~~l~~s~~g~--~l~sgs~d~~i~vwd~~~~~~~~---------------------------------------- 370 (406)
|...+.+++|+|+|. ++++++ |+.+.+|++.......
T Consensus 269 ~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (814)
T 3mkq_A 269 GLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSL 347 (814)
T ss_dssp SSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCC
T ss_pred CCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCcccee
Confidence 999999999999987 455555 5667888865432111
Q ss_pred ---eeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 371 ---TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 371 ---~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.+..+...+.+++|+|++++|++++ ||.+.+|++
T Consensus 348 ~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~ 384 (814)
T 3mkq_A 348 QTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTA 384 (814)
T ss_dssp CCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEET
T ss_pred eeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEEC
Confidence 1122344578999999999999988 899999985
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.1e-38 Score=292.11 Aligned_cols=252 Identities=25% Similarity=0.498 Sum_probs=224.5
Q ss_pred CCcEEEEecccccCeeeEEECCC-CCEEEEEeCCCcEEEEeCCCC-----eEEEEEecCCcceEEEEEecCCCEEEEEeC
Q psy226 137 TGEYERALHGHLDSVQDIAFDQS-GKLLVSCSADMSLKLWDMSTY-----QCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210 (406)
Q Consensus 137 ~~~~~~~~~~h~~~V~~l~~~~~-g~~l~sgs~d~~i~vwd~~~~-----~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 210 (406)
+..+..+|+||.+.|++|+|+|+ +++|+|||.|++|++||+.+. .+...+.+|...|.+++|+|++++|++|+.
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc
Confidence 33456679999999999999997 689999999999999998753 356788999999999999999999999999
Q ss_pred CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc-eeEEecCCceEEEEEeCCCCCcc
Q psy226 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET-KAELRGHDHTVECVAWAPGVASE 289 (406)
Q Consensus 211 d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~ 289 (406)
|+.|++|+............+...+..+.+++++.+|++|+.|+.+++||+..... .....+|...+..+.|.+..
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~--- 183 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS--- 183 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCS---
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCC---
Confidence 99999999999998888888999999999999999999999999999999876543 33456788999999998742
Q ss_pred ccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccc
Q psy226 290 SISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM 369 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~ 369 (406)
...++++++.|+.|++||+++++++..+.+|...|++++|+|++++|++|+.||.|++||+.+.+.+
T Consensus 184 -------------~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 184 -------------SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp -------------SSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred -------------CCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 3467899999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 370 KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 370 ~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
..+..+ ..|.+++|+|++.++ +++.|+.|++||++
T Consensus 251 ~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 251 YTLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLE 285 (340)
T ss_dssp EEEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETT
T ss_pred eeecCC-ceEEeeecCCCCcee-eccCCCEEEEEECC
Confidence 888755 579999999988655 56679999999964
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-38 Score=305.90 Aligned_cols=279 Identities=15% Similarity=0.167 Sum_probs=238.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc---EEEEecc------------------------------------
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE---YERALHG------------------------------------ 146 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~---~~~~~~~------------------------------------ 146 (406)
..|+.+++|+|++++|+++ .++.|++||+.+|+ ....+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3589999999999977666 57899999999998 5544432
Q ss_pred ------------------cccCeeeEEECCCCCEE-EEEeCCCcEEEEeCC--CCeEEEEEe--cCCcceEEEEEecCCC
Q psy226 147 ------------------HLDSVQDIAFDQSGKLL-VSCSADMSLKLWDMS--TYQCLKTMQ--GHDHNVTGVAFLPNSD 203 (406)
Q Consensus 147 ------------------h~~~V~~l~~~~~g~~l-~sgs~d~~i~vwd~~--~~~~~~~~~--~h~~~v~~~~~~p~~~ 203 (406)
|.+.|.+++|+|+|++| ++|+.|++|++||+. +++++..+. .|...|.+++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 33479999999999996 899999999999998 888888776 5678899999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCeEEE----EeecCCccEEEEEECCC---CCEEEEEeCCCeEEEEeCCCccceeE-EecCCc
Q psy226 204 FVLSASRDKTIKMWEVATGYCVK----TLTGHREWVRQIKVSPD---GTLLASCSNDHTARVWSLATKETKAE-LRGHDH 275 (406)
Q Consensus 204 ~l~s~s~d~~i~iwd~~~~~~~~----~~~~~~~~v~~l~~~~~---~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~ 275 (406)
+|++|+.|+.|++|++.++.... .+.+|...|.+++|+|+ +++|++|+.|+.|++||+.++..+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998876544 77899999999999999 99999999999999999998887766 568999
Q ss_pred eEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC----------------------
Q psy226 276 TVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH---------------------- 333 (406)
Q Consensus 276 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h---------------------- 333 (406)
.|.+++|+ + +.+|++|+.|+.|++||+.+++++..+..+
T Consensus 243 ~v~~~~~s-d------------------~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 243 FVSSICCG-K------------------DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp CEEEEEEC-S------------------TTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred ceEEEEEC-C------------------CCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 99999997 3 568999999999999999999988887632
Q ss_pred ---CcCEEEEEEcCCCCEEEEEe-CCCeEEEEeC--CCC---ccceeeccccceEEEEEEeCCCCEEEEeeC------CC
Q psy226 334 ---DNWVRGVTFHPGGKYLVSCG-DDKTLRVWDT--ANK---RNMKTLEAHSHFVTSLDFHRAHPYVVTGSV------DK 398 (406)
Q Consensus 334 ---~~~v~~l~~s~~g~~l~sgs-~d~~i~vwd~--~~~---~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~------Dg 398 (406)
...|.+++|+|++++|++++ .|+.|+|||+ .++ +.+..+..| ..|.+++|+|++.++++++. +.
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~ 382 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKN 382 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCC
T ss_pred ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCc
Confidence 35699999999999999999 8999999999 555 567777777 78999999996555555443 55
Q ss_pred eEEEeec
Q psy226 399 TVKVWEC 405 (406)
Q Consensus 399 ~v~iw~~ 405 (406)
.|.+|.+
T Consensus 383 ~i~v~~~ 389 (450)
T 2vdu_B 383 FAKFIEY 389 (450)
T ss_dssp SEEEEEE
T ss_pred ceEEEEE
Confidence 6888864
No 85
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-40 Score=309.67 Aligned_cols=241 Identities=19% Similarity=0.279 Sum_probs=210.3
Q ss_pred ecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCC--eEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC
Q psy226 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY--QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221 (406)
Q Consensus 144 ~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~ 221 (406)
.+.|.++|++++|+|+|++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++|+.|++|++||+.+
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 3446789999999999999999999999999999987 77788899999999999999999999999999999999998
Q ss_pred Ce---EEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCcc---ceeEEec-CCceEEEEEeCCCCCccccccc
Q psy226 222 GY---CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE---TKAELRG-HDHTVECVAWAPGVASESISEA 294 (406)
Q Consensus 222 ~~---~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~ 294 (406)
+. ....+.+|...|.+++|+|++++|++|+.|+.|++||+++.. ....+.. |...|.+++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~---------- 156 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP---------- 156 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECT----------
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcC----------
Confidence 76 677788999999999999999999999999999999998876 3667777 999999999998
Q ss_pred cCCCCCCCCCCEEEEEeCCCcEEEEECC------------------CCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCC
Q psy226 295 AGRPPGQGGGPYLATGSRDKTIKLWDVG------------------SGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356 (406)
Q Consensus 295 ~~~~~~~~~~~~l~s~~~d~~i~lwd~~------------------~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~ 356 (406)
++.+|++++.|+.|++||+. .++++..+ +|...|.+++|+|+|++|++|+.||
T Consensus 157 --------~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~ 227 (377)
T 3dwl_C 157 --------NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDS 227 (377)
T ss_dssp --------TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTT
T ss_pred --------CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCC
Confidence 46789999999999999985 35566677 9999999999999999999999999
Q ss_pred eEEEEeCCCCcc----ceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 357 TLRVWDTANKRN----MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 357 ~i~vwd~~~~~~----~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
.|++||+.+++. +..+..|...|.+++|+|++++|++|+.|+.+ +|+
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~ 278 (377)
T 3dwl_C 228 SVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQ 278 (377)
T ss_dssp EEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EEC
T ss_pred cEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEE
Confidence 999999999887 88899999999999999999999999877766 554
No 86
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2e-38 Score=320.75 Aligned_cols=248 Identities=28% Similarity=0.537 Sum_probs=221.4
Q ss_pred EEEecccccCeeeEEECCCC-CEEEEEeCCCcEEEEeCCC-----CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcE
Q psy226 141 ERALHGHLDSVQDIAFDQSG-KLLVSCSADMSLKLWDMST-----YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214 (406)
Q Consensus 141 ~~~~~~h~~~V~~l~~~~~g-~~l~sgs~d~~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 214 (406)
...+++|.+.|++|+|++++ ++|+||+.|++|++||+.+ +.....+.+|...|.+++|+|++++|++|+.|++|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 34678999999999999865 7999999999999999875 34567889999999999999999999999999999
Q ss_pred EEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEE---ecCCceEEEEEeCCCCCcccc
Q psy226 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL---RGHDHTVECVAWAPGVASESI 291 (406)
Q Consensus 215 ~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~ 291 (406)
++||+.++.+...+.+|...|.+++|+|++++|++|+.|++|++||+......... .+|...|.++.|+|+.
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----- 529 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNT----- 529 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCS-----
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCC-----
Confidence 99999999999999999999999999999999999999999999998654332222 4688899999999842
Q ss_pred ccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcccee
Q psy226 292 SEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKT 371 (406)
Q Consensus 292 ~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~ 371 (406)
....+++|+.|++|++||++++++...+.+|...|++++|+|+|++|++|+.||+|++||+.+++.+..
T Consensus 530 -----------~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 530 -----------LQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp -----------SSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC
T ss_pred -----------CcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 235799999999999999999999999999999999999999999999999999999999999998888
Q ss_pred eccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 372 LEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 372 l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+..+ ..|.+++|+|++.+|++++ |+.|++||++
T Consensus 599 ~~~~-~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 599 LEAN-SVIHALCFSPNRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp CBCS-SCEEEEEECSSSSEEEEEE-TTEEEEEETT
T ss_pred ecCC-CcEEEEEEcCCCcEEEEEc-CCCEEEEECC
Confidence 7654 5799999999999888765 6679999974
No 87
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.4e-38 Score=295.35 Aligned_cols=243 Identities=19% Similarity=0.327 Sum_probs=222.2
Q ss_pred ecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC
Q psy226 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ--CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221 (406)
Q Consensus 144 ~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~ 221 (406)
+..|.++|.+++|+|++++|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 44588999999999999999999999999999999887 8889999999999999999999999999999999999988
Q ss_pred CeEEEE--eecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc----eeEEecCCceEEEEEeCCCCCcccccccc
Q psy226 222 GYCVKT--LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET----KAELRGHDHTVECVAWAPGVASESISEAA 295 (406)
Q Consensus 222 ~~~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 295 (406)
+..... +..|...|.+++|+|++++|++++.|+.|++||+..... ......|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~----------- 152 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP----------- 152 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-----------
T ss_pred CeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-----------
Confidence 875444 467899999999999999999999999999999987763 233357889999999998
Q ss_pred CCCCCCCCCCEEEEEeCCCcEEEEEC------------------CCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCe
Q psy226 296 GRPPGQGGGPYLATGSRDKTIKLWDV------------------GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357 (406)
Q Consensus 296 ~~~~~~~~~~~l~s~~~d~~i~lwd~------------------~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~ 357 (406)
++.++++++.|+.|++||+ ..++++..+.+|...|.+++|+|++++|++++.|+.
T Consensus 153 -------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 153 -------NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp -------TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE
T ss_pred -------CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE
Confidence 4678999999999999995 467889999999999999999999999999999999
Q ss_pred EEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 358 LRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 358 i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
|++||+.+++.+..+..|...|.+++|+|++.+|++| .||.|++|++
T Consensus 226 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~ 272 (372)
T 1k8k_C 226 VCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTY 272 (372)
T ss_dssp EEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEE
T ss_pred EEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEc
Confidence 9999999999999999999999999999999999888 8999999996
No 88
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.7e-39 Score=301.67 Aligned_cols=251 Identities=18% Similarity=0.236 Sum_probs=227.7
Q ss_pred ceEEeccCCCCeEEEEEcCC----C---CEEEEEeCCCcEEEEEcCCCcE-----EEEeccc-----ccCeeeEEEC---
Q psy226 98 EKFALSGHRSPVIKVIFHPV----F---SLMASCSEDATIRLWDYETGEY-----ERALHGH-----LDSVQDIAFD--- 157 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~----~---~~latgs~dg~v~vwd~~~~~~-----~~~~~~h-----~~~V~~l~~~--- 157 (406)
....+.+|..+|++++|+|+ + .+|++|+.||.|++||+.+++. ...+.+| ...|.+++|+
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 45667899999999999999 9 9999999999999999998886 7788888 5999999999
Q ss_pred -CCCCE-EEEEeCCCcEEEEeCCC------CeEEE-----EEe-------cCCcceEEEEEecCCCEEEEEeCCCcEEEE
Q psy226 158 -QSGKL-LVSCSADMSLKLWDMST------YQCLK-----TMQ-------GHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217 (406)
Q Consensus 158 -~~g~~-l~sgs~d~~i~vwd~~~------~~~~~-----~~~-------~h~~~v~~~~~~p~~~~l~s~s~d~~i~iw 217 (406)
|++++ |++|+.|+.|++||+.+ ++.+. .+. .|...|.+++|+|++ ++++++.|+.|++|
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQIS 212 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEE
Confidence 99999 99999999999999987 55555 664 488899999999999 99999999999999
Q ss_pred EcCCCeEEEEeec---C---CccEEEEEECCCCCEEEEEeCC---CeEEEEeCCCccceeEEec-------------CCc
Q psy226 218 EVATGYCVKTLTG---H---REWVRQIKVSPDGTLLASCSND---HTARVWSLATKETKAELRG-------------HDH 275 (406)
Q Consensus 218 d~~~~~~~~~~~~---~---~~~v~~l~~~~~~~~l~s~~~d---~~v~vwd~~~~~~~~~~~~-------------~~~ 275 (406)
|++++..+..+.. | ...|.+++|+|++++|++++.| +.|++||+++.+.+..+.+ |..
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC
Confidence 9999999999998 9 9999999999999999999999 9999999999998888988 999
Q ss_pred eEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe------CC---------------C
Q psy226 276 TVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI------GH---------------D 334 (406)
Q Consensus 276 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~------~h---------------~ 334 (406)
.|.++.|+| ++.+|++++.|+.|++||+++++++..+. +| .
T Consensus 293 ~v~~~~~~~------------------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 354 (397)
T 1sq9_A 293 WVMSLSFND------------------SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAE 354 (397)
T ss_dssp CEEEEEECS------------------SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSS
T ss_pred cEEEEEECC------------------CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccC
Confidence 999999998 46799999999999999999999999999 88 9
Q ss_pred cCEEEEEEcCCC----------CEEEEEeCCCeEEEEeCCCCc
Q psy226 335 NWVRGVTFHPGG----------KYLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 335 ~~v~~l~~s~~g----------~~l~sgs~d~~i~vwd~~~~~ 367 (406)
..|.+++|+|+| ++|++|+.||.|++||+.+++
T Consensus 355 ~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 355 PGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred CceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 999999999998 799999999999999987753
No 89
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.5e-38 Score=297.84 Aligned_cols=263 Identities=21% Similarity=0.389 Sum_probs=218.8
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC-
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST- 179 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~- 179 (406)
.+.+|...|++|+|+|++++||+|+.||+|+|||+.+++....+.+|...|.+++++ +.+|++|+.|+.+++||...
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeeccc
Confidence 345788899999999999999999999999999999999999999999999998885 67999999999999999875
Q ss_pred CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe----EEEEeecCCccEEEEEECCCCC-EEEE--EeC
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY----CVKTLTGHREWVRQIKVSPDGT-LLAS--CSN 252 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~~~-~l~s--~~~ 252 (406)
...+..+.+|...+..+.|+|++.++++++.|+.+++||..++. .+.....|...|.+++|+|.+. ++++ |+.
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~ 299 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 299 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT
T ss_pred ceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC
Confidence 45567889999999999999999999999999999999998764 3566778999999999999664 5554 457
Q ss_pred CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe--CCCcEEEEECCCCeEEEEE
Q psy226 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS--RDKTIKLWDVGSGSLLFTL 330 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~d~~i~lwd~~~~~~~~~~ 330 (406)
|++|++||+.++.....+..|. .+.++.|.|. +..+++++ .|+.|+|||+.+++++..+
T Consensus 300 D~~I~iwd~~t~~~~~~~~~~~-~v~~~~~~~~------------------~~~lv~~sg~~d~~I~iwd~~~~~~v~~l 360 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDAHS-QVCSILWSPH------------------YKELISGHGFAQNQLVIWKYPTMAKVAEL 360 (420)
T ss_dssp TCEEEEEETTTTEEEEEEECSS-CEEEEEEETT------------------TTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCccccceeecccc-ceeeeeecCC------------------CCeEEEEEecCCCEEEEEECCCCcEEEEE
Confidence 9999999999998888777654 5677888873 44565554 7999999999999999999
Q ss_pred eCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEE
Q psy226 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384 (406)
Q Consensus 331 ~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 384 (406)
.+|.+.|++++|+|+|++|+|||.|++|+|||+......+..+.+...+....|
T Consensus 361 ~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 361 KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC---------------
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 999999999999999999999999999999999877666665555444433333
No 90
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.2e-39 Score=299.49 Aligned_cols=242 Identities=20% Similarity=0.343 Sum_probs=215.1
Q ss_pred CCCCeEEEEEcCC----CCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECC-CCCEEEEEeCCCcEEEEeCCC
Q psy226 105 HRSPVIKVIFHPV----FSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ-SGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 105 h~~~V~~v~~~p~----~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~g~~l~sgs~d~~i~vwd~~~ 179 (406)
|...|++++|+|+ +.+|++|+.||.|++||+.+++....+.+|...|.+++|+| ++.+|++|+.|+.|++||+.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 6788999999999 67999999999999999999999999999999999999999 899999999999999999999
Q ss_pred CeEEEEE---ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEee---------------------------
Q psy226 180 YQCLKTM---QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT--------------------------- 229 (406)
Q Consensus 180 ~~~~~~~---~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--------------------------- 229 (406)
++.+..+ .+|...|.+++|+|++++|++++.|+.|++||++++.....+.
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 9988888 6899999999999999999999999999999998765443333
Q ss_pred -cCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc--------------eeEEecCCceEEEEEeCCCCCccccccc
Q psy226 230 -GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET--------------KAELRGHDHTVECVAWAPGVASESISEA 294 (406)
Q Consensus 230 -~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 294 (406)
+|...|.+++|+ ++++++++.|+.|++||+.+... ...+..|...|.+++|+|+
T Consensus 228 ~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--------- 296 (366)
T 3k26_A 228 DIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMD--------- 296 (366)
T ss_dssp SSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEEC---------
T ss_pred cCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCC---------
Confidence 399999999998 77999999999999999987644 5566677777777777762
Q ss_pred cCCCCCCCCCCEEEEEeCCCcEEEEECCCCe----EEEEEeCC--CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy226 295 AGRPPGQGGGPYLATGSRDKTIKLWDVGSGS----LLFTLIGH--DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 295 ~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~----~~~~~~~h--~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~ 364 (406)
..+.+|++|+.||.|++||+.+++ ....+.+| ...|++++|+|++++|++|+.||.|++||+.
T Consensus 297 -------~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 297 -------FWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp -------TTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred -------CCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 127899999999999999999875 45577777 7899999999999999999999999999985
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.7e-38 Score=301.81 Aligned_cols=248 Identities=23% Similarity=0.441 Sum_probs=219.9
Q ss_pred EEecccccCeeeEEECCC-CCEEEEEeCCCcEEEEeCCC----------CeEEEEEecCCcceEEEEEecCCC-EEEEEe
Q psy226 142 RALHGHLDSVQDIAFDQS-GKLLVSCSADMSLKLWDMST----------YQCLKTMQGHDHNVTGVAFLPNSD-FVLSAS 209 (406)
Q Consensus 142 ~~~~~h~~~V~~l~~~~~-g~~l~sgs~d~~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s 209 (406)
....+|.+.|++++|+|+ +.+|++|+.||.|++||+.+ .+.+..+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345679999999999997 68999999999999999976 567788899999999999999988 999999
Q ss_pred CCCcEEEEEcCCCeE-------EEEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEeCCCc---cceeEEecCCceEE
Q psy226 210 RDKTIKMWEVATGYC-------VKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATK---ETKAELRGHDHTVE 278 (406)
Q Consensus 210 ~d~~i~iwd~~~~~~-------~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~v~vwd~~~~---~~~~~~~~~~~~v~ 278 (406)
.||+|++||+.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||+++. .....+..|...|.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987321 456778999999999999 7889999999999999999876 56777889999999
Q ss_pred EEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCEEEEEEcCCCC-EEEEEeCCC
Q psy226 279 CVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS-GSLLFTLIGHDNWVRGVTFHPGGK-YLVSCGDDK 356 (406)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~-~~~~~~~~~h~~~v~~l~~s~~g~-~l~sgs~d~ 356 (406)
+++|+|. +..++++|+.||.|++||+++ +.++..+.+|...|.+++|+|+++ +|++++.|+
T Consensus 282 ~i~~~p~-----------------~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 282 CLSFNPY-----------------SEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp EEEECSS-----------------CTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEeCCC-----------------CCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 9999984 234799999999999999998 567888999999999999999985 689999999
Q ss_pred eEEEEeCCC--------------CccceeeccccceEEEEEEeCCCC-EEEEeeCCCeEEEeecC
Q psy226 357 TLRVWDTAN--------------KRNMKTLEAHSHFVTSLDFHRAHP-YVVTGSVDKTVKVWECR 406 (406)
Q Consensus 357 ~i~vwd~~~--------------~~~~~~l~~h~~~v~~l~~~~~~~-~l~sgs~Dg~v~iw~~~ 406 (406)
.|+|||+.. .+.+..+.+|...|++++|+|+++ +|++++.||.|++|++.
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 999999976 245566778999999999999999 99999999999999863
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-39 Score=310.50 Aligned_cols=267 Identities=16% Similarity=0.261 Sum_probs=226.6
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe-cccccCeeeEEECC-CCCEEEEEeCCCcEEEEeCCC---Ce---EEE
Q psy226 113 IFHPVFSLMASCSEDATIRLWDYETGEYERAL-HGHLDSVQDIAFDQ-SGKLLVSCSADMSLKLWDMST---YQ---CLK 184 (406)
Q Consensus 113 ~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~-~~h~~~V~~l~~~~-~g~~l~sgs~d~~i~vwd~~~---~~---~~~ 184 (406)
.|+|++..+++++ .|+ .+++....+ .+|.+.|++++|+| ++.+|++|+.|++|++||+.+ +. ...
T Consensus 34 ~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~ 106 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL 106 (437)
T ss_dssp GGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE
T ss_pred hcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee
Confidence 3778888887765 387 556777777 89999999999999 999999999999999999865 32 222
Q ss_pred EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcC---CCeEEEEeec------------CCccEEEEE--ECCCCCEE
Q psy226 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA---TGYCVKTLTG------------HREWVRQIK--VSPDGTLL 247 (406)
Q Consensus 185 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~------------~~~~v~~l~--~~~~~~~l 247 (406)
.+ +|...|.+++|+|++++|++|+.|++|++||+. ++.....+.+ +...+.++. +++++.++
T Consensus 107 ~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 107 TY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp EE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred ec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 33 589999999999999999999999999999994 5555544432 344566666 66889999
Q ss_pred EEEeCCCeEEEEeCCCccceeEEec--CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe
Q psy226 248 ASCSNDHTARVWSLATKETKAELRG--HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS 325 (406)
Q Consensus 248 ~s~~~d~~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~ 325 (406)
++|+.|+.|++||+++.+....+.+ |...|.+++|+| ++.+|++|+.||.|++||+++++
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~------------------~~~~l~s~~~dg~i~iwd~~~~~ 247 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDE------------------ECCVLILGTTRGIIDIWDIRFNV 247 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECT------------------TSCEEEEEETTSCEEEEETTTTE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECC------------------CCCEEEEEcCCCeEEEEEcCCcc
Confidence 9999999999999999999998988 889999999998 47789999999999999999999
Q ss_pred EEEEEe-CCCcCEEEEEEc----CCCCEEEEEeCCCeEEEEeCCCCccceeecc--------------------------
Q psy226 326 LLFTLI-GHDNWVRGVTFH----PGGKYLVSCGDDKTLRVWDTANKRNMKTLEA-------------------------- 374 (406)
Q Consensus 326 ~~~~~~-~h~~~v~~l~~s----~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~-------------------------- 374 (406)
++..+. +|...|.+++|+ |++.+|++|+.||.|++||+.+++.+..+.+
T Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 327 (437)
T 3gre_A 248 LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIR 327 (437)
T ss_dssp EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCC
T ss_pred EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccc
Confidence 998886 788899999665 4688999999999999999998887666653
Q ss_pred ccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 375 h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|...|++++|+ ++++|++|+.||.|++||++
T Consensus 328 ~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 328 SLNALSTISVS-NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp SGGGGCCEEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred cCCceEEEEEC-CceEEEecCCCCeEEEEECC
Confidence 55668899999 77899999999999999974
No 93
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-37 Score=295.09 Aligned_cols=248 Identities=21% Similarity=0.364 Sum_probs=219.6
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC-CCeE
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS-TYQC 182 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~-~~~~ 182 (406)
.|..+|++++|+|++.+|++|+.||.|++||+.+++....+.+|...|.+++| ++.+|++|+.|+.|++||+. ....
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce
Confidence 48899999999999999999999999999999999999999999999999999 46799999999999999998 5667
Q ss_pred EEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCC-CEEEEEe--CCCeEEEE
Q psy226 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-TLLASCS--NDHTARVW 259 (406)
Q Consensus 183 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~--~d~~v~vw 259 (406)
...+.+|...|.+++|+|++.+|++|+.|+.|++||++++..+..+.+|...|.+++|+|++ .++++|+ .|+.|++|
T Consensus 210 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred eeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 88899999999999999999999999999999999999999999999999999999999976 5566655 79999999
Q ss_pred eCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE--EeCCCcEEEEECCCCeEEE--EEeCCCc
Q psy226 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT--GSRDKTIKLWDVGSGSLLF--TLIGHDN 335 (406)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~i~lwd~~~~~~~~--~~~~h~~ 335 (406)
|+.++.....+. +...+.+++|+| ++.++++ |+.|+.|++||+.++.... .+.+|..
T Consensus 290 d~~~~~~~~~~~-~~~~v~~~~~s~------------------~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~ 350 (401)
T 4aez_A 290 NAATGARVNTVD-AGSQVTSLIWSP------------------HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDT 350 (401)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECS------------------SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSS
T ss_pred ECCCCCEEEEEe-CCCcEEEEEECC------------------CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCC
Confidence 999988877775 567899999998 4677888 4489999999999876544 4679999
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee
Q psy226 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l 372 (406)
.|.+++|+|+|++|++++.||.|++||+.+++.+...
T Consensus 351 ~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 351 RVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp CCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 9999999999999999999999999999988776554
No 94
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.1e-37 Score=289.92 Aligned_cols=275 Identities=13% Similarity=0.173 Sum_probs=220.2
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEE-EEEeCCCcEEEEeCCC
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL-VSCSADMSLKLWDMST 179 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l-~sgs~d~~i~vwd~~~ 179 (406)
.+.+|..+|++++|+|++++||+|+.+| ++|||..+++..... +...+..+++.++++.+ ++|+.|++|++||+.+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ--EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK 90 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE--ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTT
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee--ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCC
Confidence 4578999999999999999999998775 789999887655443 33358888999988877 5677889999999999
Q ss_pred CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC-eEEEEeecCCccEEEEEECCCCCEEEE--EeCCCeE
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG-YCVKTLTGHREWVRQIKVSPDGTLLAS--CSNDHTA 256 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s--~~~d~~v 256 (406)
++++..+. +...|.+++|+++. ++++ .|+.|++||+.++ ..+..+.. ....+++++ .+++. |+.||.|
T Consensus 91 ~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v 161 (355)
T 3vu4_A 91 KQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQI 161 (355)
T ss_dssp TEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCE
T ss_pred CcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEE
Confidence 99988886 66799999998763 4443 4789999999988 66655554 344566777 56655 5899999
Q ss_pred EEEeCCCcc---------------c-eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCc-EEEE
Q psy226 257 RVWSLATKE---------------T-KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKT-IKLW 319 (406)
Q Consensus 257 ~vwd~~~~~---------------~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~-i~lw 319 (406)
++||+.+.. + ...+.+|...|.+++|+| ++.+|++|+.|++ |++|
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~------------------~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR------------------KSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECT------------------TSSEEEEEETTCSEEEEE
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC------------------CCCEEEEEeCCCCEEEEE
Confidence 999998754 2 678899999999999998 4789999999998 9999
Q ss_pred ECCCCeEEEEEe-C-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc--ceeecc---------------------
Q psy226 320 DVGSGSLLFTLI-G-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN--MKTLEA--------------------- 374 (406)
Q Consensus 320 d~~~~~~~~~~~-~-h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~--~~~l~~--------------------- 374 (406)
|+++++++..+. + |...|.+++|+|+|++|++|+.|++|++||+..+.. ...+..
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC
Confidence 999999999998 6 999999999999999999999999999999976431 111111
Q ss_pred ccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 375 h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+......++|++++.+|++++.||.+++|++
T Consensus 304 ~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 304 KHVRGCKIAWISESSLVVVWPHTRMIETFKV 334 (355)
T ss_dssp TTCCCCEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred CCCCceEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 1112367899999999999999999999985
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.2e-38 Score=294.46 Aligned_cols=251 Identities=16% Similarity=0.253 Sum_probs=217.2
Q ss_pred EEcCCCcEEEEecccccCeeeEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEe--cCCcceEEEEEec-CCCEEEEE
Q psy226 133 WDYETGEYERALHGHLDSVQDIAFDQSG-KLLVSCSADMSLKLWDMSTYQCLKTMQ--GHDHNVTGVAFLP-NSDFVLSA 208 (406)
Q Consensus 133 wd~~~~~~~~~~~~h~~~V~~l~~~~~g-~~l~sgs~d~~i~vwd~~~~~~~~~~~--~h~~~v~~~~~~p-~~~~l~s~ 208 (406)
|+..+.+....+.+|...|++++|+|++ ++|++|+.|+.|++||+.+++....+. +|...|.+++|+| ++++|+++
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 3445556677888999999999999999 999999999999999999877766665 6999999999999 67899999
Q ss_pred eCCCcEEEEEcCCCeEEEEeecC---CccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCC
Q psy226 209 SRDKTIKMWEVATGYCVKTLTGH---REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG 285 (406)
Q Consensus 209 s~d~~i~iwd~~~~~~~~~~~~~---~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 285 (406)
+.|++|++||+.+ ..+..+..+ ...|.+++|+|++++|++|+.|+.|++||+ +......+.+|...|.+++|+|+
T Consensus 138 ~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 138 SIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp ETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSS
T ss_pred eCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCC
Confidence 9999999999986 555565544 478999999999999999999999999999 56678888999999999999984
Q ss_pred CCccccccccCCCCCCCCCC-EEEEEeCCCcEEEEECCC----CeEEEEEeCCCcCEEEEEEcC-CCCEEEEEeCCCeEE
Q psy226 286 VASESISEAAGRPPGQGGGP-YLATGSRDKTIKLWDVGS----GSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359 (406)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~lwd~~~----~~~~~~~~~h~~~v~~l~~s~-~g~~l~sgs~d~~i~ 359 (406)
+. ++++|+.|+.|++||+++ +.++..+ +|...|.+++|+| +|++|++++.|+.|+
T Consensus 216 ------------------~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 216 ------------------CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp ------------------CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred ------------------CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 45 899999999999999987 6677666 6999999999999 999999999999999
Q ss_pred EEeCCCCccceeecccc-----------------ceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 360 VWDTANKRNMKTLEAHS-----------------HFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 360 vwd~~~~~~~~~l~~h~-----------------~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+||+.+++....+..|. ..+..++|+|++++ +|+.||.|++||++
T Consensus 277 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 277 VYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp EEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETT
T ss_pred EEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecC
Confidence 99999988877776553 23445677777776 78899999999963
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-37 Score=283.94 Aligned_cols=245 Identities=20% Similarity=0.405 Sum_probs=225.2
Q ss_pred EEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcC
Q psy226 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220 (406)
Q Consensus 141 ~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~ 220 (406)
...+.+|.+.|++++|+|+|++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEeecCCccEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCcc-----------ceeEEecCCc--eEEEEEe
Q psy226 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSND-----HTARVWSLATKE-----------TKAELRGHDH--TVECVAW 282 (406)
Q Consensus 221 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-----~~v~vwd~~~~~-----------~~~~~~~~~~--~v~~~~~ 282 (406)
++.++..+. +...+.+++|+|++.++++++.+ +.|++||+.... ....+..|.. .+.+++|
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999988887 88899999999999999999999 999999987653 3344555655 8899999
Q ss_pred CCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEE
Q psy226 283 APGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS-GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361 (406)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~-~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vw 361 (406)
+| ++.++++++.|+.|++||+++ +..+..+..|...|.+++|+|++++|++++.|+.|++|
T Consensus 184 ~~------------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 184 ST------------------KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLV 245 (369)
T ss_dssp CG------------------GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cC------------------CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEE
Confidence 87 467899999999999999998 78889999999999999999999999999999999999
Q ss_pred eCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCC--------------eEEEeec
Q psy226 362 DTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDK--------------TVKVWEC 405 (406)
Q Consensus 362 d~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg--------------~v~iw~~ 405 (406)
|+.+++.+..+. +...+.+++|+|+++++++++.++ .+++||.
T Consensus 246 d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~ 302 (369)
T 3zwl_B 246 DVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHK 302 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEET
T ss_pred ECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEec
Confidence 999998888887 667899999999999999999998 8999986
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.2e-38 Score=291.24 Aligned_cols=247 Identities=18% Similarity=0.228 Sum_probs=216.9
Q ss_pred eccCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEEcCCCc-EEEEecccccCeeeEE------ECCCCCEEEEEeCCCc
Q psy226 102 LSGHRSPVIKVIFHPV---FSLMASCSEDATIRLWDYETGE-YERALHGHLDSVQDIA------FDQSGKLLVSCSADMS 171 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~---~~~latgs~dg~v~vwd~~~~~-~~~~~~~h~~~V~~l~------~~~~g~~l~sgs~d~~ 171 (406)
..+|..+|++++|+|+ +.+|++|+.||.|++||+.+++ ....+.+|...|.+++ |+|++++|++|+.|+.
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~ 140 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGT 140 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSC
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCe
Confidence 3479999999999999 6999999999999999999988 7888999999999995 5789999999999999
Q ss_pred EEEEeCCCCe-EEEEEecCCc----ceEEEE----EecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECC
Q psy226 172 LKLWDMSTYQ-CLKTMQGHDH----NVTGVA----FLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242 (406)
Q Consensus 172 i~vwd~~~~~-~~~~~~~h~~----~v~~~~----~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~ 242 (406)
|++||+.+++ .+..+..|.. .+.+++ |+|+++++++++.|+.|++||++++.... ...|...|.+++|+|
T Consensus 141 i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~ 219 (357)
T 3i2n_A 141 VKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVCSLEFDR 219 (357)
T ss_dssp EEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEESC
T ss_pred EEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee-ecCCCCceEEEEcCC
Confidence 9999999876 6677766554 788888 67899999999999999999999988744 467889999999999
Q ss_pred ---CCCEEEEEeCCCeEEEEeCCCccceeEEe-----cCCceEEEEEeCCCCCccccccccCCCCCCCCCC-EEEEEeCC
Q psy226 243 ---DGTLLASCSNDHTARVWSLATKETKAELR-----GHDHTVECVAWAPGVASESISEAAGRPPGQGGGP-YLATGSRD 313 (406)
Q Consensus 243 ---~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d 313 (406)
++.++++|+.||.|++||+++......+. +|...|.+++|+|+ +. ++++|+.|
T Consensus 220 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------------~~~~l~~~~~d 281 (357)
T 3i2n_A 220 KDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQ------------------NRELFLTAGGA 281 (357)
T ss_dssp SSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETT------------------EEEEEEEEETT
T ss_pred CCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCC------------------CCcEEEEEeCC
Confidence 99999999999999999998876665554 89999999999983 45 79999999
Q ss_pred CcEEEEECCCC-------------------eEEEEEeCCCcCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCCCc
Q psy226 314 KTIKLWDVGSG-------------------SLLFTLIGHDNWVRGVTFHPGGKYLV-SCGDDKTLRVWDTANKR 367 (406)
Q Consensus 314 ~~i~lwd~~~~-------------------~~~~~~~~h~~~v~~l~~s~~g~~l~-sgs~d~~i~vwd~~~~~ 367 (406)
|.|++||++.+ +++..+.+|...|++++|+|+|++|+ +|+.||.|++||+.+..
T Consensus 282 g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 282 GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 99999998753 46778899999999999999999998 89999999999997654
No 98
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-38 Score=309.91 Aligned_cols=246 Identities=11% Similarity=0.048 Sum_probs=206.8
Q ss_pred EeccCCCCeEEEEEcCC------CCEEEEEeCCCcEEEEEcCCCcE-----------EEEecccccCeeeEEECCCCCEE
Q psy226 101 ALSGHRSPVIKVIFHPV------FSLMASCSEDATIRLWDYETGEY-----------ERALHGHLDSVQDIAFDQSGKLL 163 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~------~~~latgs~dg~v~vwd~~~~~~-----------~~~~~~h~~~V~~l~~~~~g~~l 163 (406)
.+.+|.+.|.+++|+|+ +.+||+|+.||+|++||+.++.. ...+.+|...|++++|+++ ..|
T Consensus 202 ~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~l 280 (524)
T 2j04_B 202 TIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTV 280 (524)
T ss_dssp EEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEE
T ss_pred EEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeE
Confidence 35678899999999997 57999999999999999987642 2367889999999999986 489
Q ss_pred EEEeCCCcEEEEeCCCCe-EEEEEecCCcceEEE--EEecCC-CEEEEEeCCCcEEEEEcCCCeEEEEeecCCc--cEEE
Q psy226 164 VSCSADMSLKLWDMSTYQ-CLKTMQGHDHNVTGV--AFLPNS-DFVLSASRDKTIKMWEVATGYCVKTLTGHRE--WVRQ 237 (406)
Q Consensus 164 ~sgs~d~~i~vwd~~~~~-~~~~~~~h~~~v~~~--~~~p~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~v~~ 237 (406)
++|+.||+|++||+.++. ....+.+|...|.++ .|+|++ .+|++||.|++|++||++++.+...+.+|.. .|.+
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~ 360 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVP 360 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCC
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccc
Confidence 999999999999998653 445688999999999 567887 8999999999999999999888777777754 5789
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEE
Q psy226 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIK 317 (406)
Q Consensus 238 l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 317 (406)
++|+|++..+++++.|++|++||+++......+.+|...|.+++|+|+ +.+|++|+.|++|+
T Consensus 361 v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~------------------g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 361 VVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL------------------HPMVLAGSADGSLI 422 (524)
T ss_dssp EEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSS------------------CCBCEEEETTTEEE
T ss_pred eEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCC------------------CCeEEEEECCCEEE
Confidence 999999999999999999999999998888888999999999999983 66788888898888
Q ss_pred EEECCC--------------------------------------------CeEEEEEeCCCcCEEEEEEcCCCC---EEE
Q psy226 318 LWDVGS--------------------------------------------GSLLFTLIGHDNWVRGVTFHPGGK---YLV 350 (406)
Q Consensus 318 lwd~~~--------------------------------------------~~~~~~~~~h~~~v~~l~~s~~g~---~l~ 350 (406)
+||+.. +.++..+.+|...|.+|+|+|++. .++
T Consensus 423 lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lA 502 (524)
T 2j04_B 423 ITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYA 502 (524)
T ss_dssp CCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEE
T ss_pred EEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHH
Confidence 887421 222345567888999999999964 999
Q ss_pred EEeCCCeEEEEeCCC
Q psy226 351 SCGDDKTLRVWDTAN 365 (406)
Q Consensus 351 sgs~d~~i~vwd~~~ 365 (406)
+|+.||.|+||++..
T Consensus 503 sg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 503 FSNSAGLLTLEYLSL 517 (524)
T ss_dssp EECTTSEEEEEECSC
T ss_pred hhccCceEEEEEccc
Confidence 999999999999764
No 99
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=299.71 Aligned_cols=241 Identities=19% Similarity=0.378 Sum_probs=208.2
Q ss_pred cccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe-----------EEEEEecCC------------cceEEEEEecCC-
Q psy226 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ-----------CLKTMQGHD------------HNVTGVAFLPNS- 202 (406)
Q Consensus 147 h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~p~~- 202 (406)
|.+.|++++|+|+|++|++|+.||.|++||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 67899999999999999999999999999998766 578889998 889999999998
Q ss_pred -CEEEEEeCCCcEEEEEcCCCeEE---------------------------------------EE-eecCCccEEEEEEC
Q psy226 203 -DFVLSASRDKTIKMWEVATGYCV---------------------------------------KT-LTGHREWVRQIKVS 241 (406)
Q Consensus 203 -~~l~s~s~d~~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~l~~~ 241 (406)
.+|++++.|++|++||+.++... .. ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 79999999999999999765432 12 36899999999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCcc-cee-------EEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC
Q psy226 242 PDGTLLASCSNDHTARVWSLATKE-TKA-------ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD 313 (406)
Q Consensus 242 ~~~~~l~s~~~d~~v~vwd~~~~~-~~~-------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 313 (406)
|++++|++| .|+.|++||+.+.. ... .+.+|...|.+++|+|. +..+|++|+.|
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-----------------~~~~l~s~~~d 248 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPN-----------------SCNTFVYSSSK 248 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSS-----------------CTTEEEEEETT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCC-----------------CCcEEEEEeCC
Confidence 999999999 89999999998433 333 25589999999999984 12789999999
Q ss_pred CcEEEEECCCCeE----EEEEeCCCc------------CEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-Cccceeecccc
Q psy226 314 KTIKLWDVGSGSL----LFTLIGHDN------------WVRGVTFHPGGKYLVSCGDDKTLRVWDTAN-KRNMKTLEAHS 376 (406)
Q Consensus 314 ~~i~lwd~~~~~~----~~~~~~h~~------------~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~-~~~~~~l~~h~ 376 (406)
+.|++||+++++. +..+.+|.. .|.+++|+|+|++|++++. +.|++||+.+ ++.+.++..|.
T Consensus 249 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~ 327 (447)
T 3dw8_B 249 GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHE 327 (447)
T ss_dssp SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCG
T ss_pred CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccc
Confidence 9999999999886 778888876 8999999999999999999 9999999987 88888898886
Q ss_pred ce---------------EEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 377 HF---------------VTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 377 ~~---------------v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
.. +..++|+|++++|++|+.||.|++||++
T Consensus 328 ~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 328 YLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp GGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred cccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 42 2348999999999999999999999973
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-38 Score=292.42 Aligned_cols=263 Identities=12% Similarity=0.088 Sum_probs=217.2
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC---------CCeEEE
Q psy226 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS---------TYQCLK 184 (406)
Q Consensus 114 ~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~---------~~~~~~ 184 (406)
+.+++.+|++|+.||+|++||+.+++....+. ...|.++.|+|+ +++|+.|++|++|+.. +++.+.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 44578899999999999999999998877776 577889999998 9999999999999765 444444
Q ss_pred EEe-cCCcceEEEEEec--CCCEEEEEeCCCcEEEEEcCCCeEEEEee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEe
Q psy226 185 TMQ-GHDHNVTGVAFLP--NSDFVLSASRDKTIKMWEVATGYCVKTLT-GHREWVRQIKVSPDGTLLASCSNDHTARVWS 260 (406)
Q Consensus 185 ~~~-~h~~~v~~~~~~p--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd 260 (406)
.+. +|...|.+++|+| +++++++|+.|++|++||++++.+..... .|...+.+++|+|+|.+|++|+.||.|++||
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 443 6778899999999 99999999999999999999998877664 4555899999999999999999999999999
Q ss_pred CCCccce-eEEec-CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC---CCc
Q psy226 261 LATKETK-AELRG-HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG---HDN 335 (406)
Q Consensus 261 ~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~---h~~ 335 (406)
++++... ..+.. |..+|.+++|+| ++.+|++++ |+.|++||+++++.+..+.. |..
T Consensus 199 ~~~~~~~~~~~~~~h~~~v~~l~fs~------------------~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~ 259 (343)
T 3lrv_A 199 LSSPDQASSRFPVDEEAKIKEVKFAD------------------NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEF 259 (343)
T ss_dssp SSCTTSCCEECCCCTTSCEEEEEECT------------------TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC---
T ss_pred CCCCCCCccEEeccCCCCEEEEEEeC------------------CCCEEEEEe-CCeEEEEEcCCCCcceeecccccccc
Confidence 9998877 77887 999999999998 477899999 55999999998876544433 333
Q ss_pred CEE--EEEEcCCCCEEEEEeC-CCeEEEEeCCCCccceeeccccceEEEEEEeC---CCCEEEEeeCCCeEEEee
Q psy226 336 WVR--GVTFHPGGKYLVSCGD-DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR---AHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 336 ~v~--~l~~s~~g~~l~sgs~-d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~---~~~~l~sgs~Dg~v~iw~ 404 (406)
.+. +++|+|+|++|++++. |+.|+||++......-.. ..+..++|.+ +...|++++.||.+.++-
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEE
Confidence 343 6999999999999998 999999998765433222 5688899998 889999999999998863
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-36 Score=277.11 Aligned_cols=242 Identities=24% Similarity=0.366 Sum_probs=221.3
Q ss_pred cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEE
Q psy226 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218 (406)
Q Consensus 139 ~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd 218 (406)
+....+.+|.+.|++++| +++.+|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++|+.|+.|++|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 87 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVP 87 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 667889999999999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC---eEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCcccccccc
Q psy226 219 VATG---YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAA 295 (406)
Q Consensus 219 ~~~~---~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 295 (406)
+... ..+..+.+|...|.+++| ++.++++++.|+.|++|| .......+..|...+.++.|.|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~---------- 153 (313)
T 3odt_A 88 LFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF---------- 153 (313)
T ss_dssp TTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET----------
T ss_pred eeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC----------
Confidence 8654 567788899999999999 678999999999999999 56677788899999999999872
Q ss_pred CCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc
Q psy226 296 GRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374 (406)
Q Consensus 296 ~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~ 374 (406)
++.++++++.|+.|++|| .++....+.. |...|.+++|+|++. +++++.||.|++||+.+++.+..+..
T Consensus 154 -------~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 154 -------SENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp -------TTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred -------CCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc
Confidence 366899999999999999 5567777777 899999999999998 89999999999999999999999999
Q ss_pred ccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 375 h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|...|++++|+|++ .|++|+.||.|++||++
T Consensus 224 ~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 224 HESFVYCIKLLPNG-DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp CSSCEEEEEECTTS-CEEEEETTSEEEEECTT
T ss_pred CCceEEEEEEecCC-CEEEEecCCEEEEEECC
Confidence 99999999999999 58899999999999964
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.2e-38 Score=318.97 Aligned_cols=260 Identities=25% Similarity=0.442 Sum_probs=221.7
Q ss_pred EEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEecCCcceEEEEEecC--CCEEEEEeCCCcEEEE
Q psy226 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS--TYQCLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTIKMW 217 (406)
Q Consensus 142 ~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~--~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~iw 217 (406)
..+.+|.+.|++++|+|+|++|++|+.||+|++||+. +++....+.+|..+|.+++|+|+ +++|++|+.||+|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4578999999999999999999999999999999997 56778889999999999999988 8999999999999999
Q ss_pred EcCCCe--EEEEeecCCccEEEEEECCC--CCEEEEEeCCCeEEEEeCCCc--cceeEEecCCceEEEEEeCCCCCcccc
Q psy226 218 EVATGY--CVKTLTGHREWVRQIKVSPD--GTLLASCSNDHTARVWSLATK--ETKAELRGHDHTVECVAWAPGVASESI 291 (406)
Q Consensus 218 d~~~~~--~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~ 291 (406)
|+.++. .+..+.+|...|.+++|+|+ +.++++|+.||.|++||+++. .....+.+|...|.++.|+|.......
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999987 77888899999999999999 999999999999999999876 345567789999999999984211100
Q ss_pred ccccCCCCCCCCCCEEEEEeCCCcEEEEECCCC----eEEEEEeCCCcCEEEEEEcCC---CCEEEEEeCCCeEEEEeCC
Q psy226 292 SEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG----SLLFTLIGHDNWVRGVTFHPG---GKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 292 ~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~----~~~~~~~~h~~~v~~l~~s~~---g~~l~sgs~d~~i~vwd~~ 364 (406)
......++.++++|+.||.|++||++++ .+...+.+|...|++++|+|+ +++|++|+.||.|++||+.
T Consensus 163 -----~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 163 -----EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred -----ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 0001124678999999999999999876 567788899999999999999 9999999999999999998
Q ss_pred CCc-----cceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 365 NKR-----NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 365 ~~~-----~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
++. .......|...|++++|+|++++|++|+.||.|++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 764 333445688899999999999999999999999999963
No 103
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-38 Score=321.86 Aligned_cols=250 Identities=22% Similarity=0.392 Sum_probs=220.0
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC--CCcEEEEecccccCeeeEEECCC--CCEEEEEeCCCcEEEEe
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE--TGEYERALHGHLDSVQDIAFDQS--GKLLVSCSADMSLKLWD 176 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~--~~~~~~~~~~h~~~V~~l~~~~~--g~~l~sgs~d~~i~vwd 176 (406)
.+.||.++|++++|+|++++|++|+.||+|+|||+. +++....+.+|.++|.+++|+++ +++|++|+.||+|++||
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd 83 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEE
Confidence 578999999999999999999999999999999998 45667788999999999999988 99999999999999999
Q ss_pred CCCCe--EEEEEecCCcceEEEEEecC--CCEEEEEeCCCcEEEEEcCCC--eEEEEeecCCccEEEEEECC--------
Q psy226 177 MSTYQ--CLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTIKMWEVATG--YCVKTLTGHREWVRQIKVSP-------- 242 (406)
Q Consensus 177 ~~~~~--~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~~~~~v~~l~~~~-------- 242 (406)
+.+++ ....+.+|...|.+++|+|+ ++++++|+.||+|++||+.++ .....+.+|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~ 163 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC------
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccc
Confidence 99886 67788899999999999999 999999999999999999877 34556778999999999999
Q ss_pred -----CCCEEEEEeCCCeEEEEeCCCc----cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC
Q psy226 243 -----DGTLLASCSNDHTARVWSLATK----ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD 313 (406)
Q Consensus 243 -----~~~~l~s~~~d~~v~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 313 (406)
++.++++|+.||.|++||+++. .....+.+|...|.+++|+|+. ..+.++++|+.|
T Consensus 164 ~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~---------------~~~~~l~s~s~D 228 (753)
T 3jro_A 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------------LLRSYLASVSQD 228 (753)
T ss_dssp ---CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------------SSSEEEEEEESS
T ss_pred cccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC---------------CCCCEEEEEecC
Confidence 5899999999999999999876 3456778899999999999841 016789999999
Q ss_pred CcEEEEECCCCe-----EEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy226 314 KTIKLWDVGSGS-----LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365 (406)
Q Consensus 314 ~~i~lwd~~~~~-----~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~ 365 (406)
|.|++||+.++. .+....+|...|++++|+|+|++|++|+.||.|++||+.+
T Consensus 229 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 999999998864 3334456888999999999999999999999999999875
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.1e-37 Score=294.50 Aligned_cols=250 Identities=22% Similarity=0.432 Sum_probs=223.2
Q ss_pred EEeccCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEEcCC----------CcEEEEecccccCeeeEEECCCCC-EEEEEe
Q psy226 100 FALSGHRSPVIKVIFHPV-FSLMASCSEDATIRLWDYET----------GEYERALHGHLDSVQDIAFDQSGK-LLVSCS 167 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~-~~~latgs~dg~v~vwd~~~----------~~~~~~~~~h~~~V~~l~~~~~g~-~l~sgs 167 (406)
..+.+|.++|++++|+|+ +.+||+|+.||.|++||+.+ ......+.+|...|.+++|+|++. +|++|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 446689999999999998 68999999999999999986 566778889999999999999998 999999
Q ss_pred CCCcEEEEeCCCCeE-------EEEEecCCcceEEEEEec-CCCEEEEEeCCCcEEEEEcCCC---eEEEEeecCCccEE
Q psy226 168 ADMSLKLWDMSTYQC-------LKTMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATG---YCVKTLTGHREWVR 236 (406)
Q Consensus 168 ~d~~i~vwd~~~~~~-------~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~~~~~v~ 236 (406)
.||+|++||+.++.. ...+.+|...|.+++|+| ++.++++++.|+.|++||++++ ..+..+..|...|+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999986321 356778999999999999 6789999999999999999987 57778889999999
Q ss_pred EEEECCCCC-EEEEEeCCCeEEEEeCCC-ccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC
Q psy226 237 QIKVSPDGT-LLASCSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK 314 (406)
Q Consensus 237 ~l~~~~~~~-~l~s~~~d~~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 314 (406)
+++|+|++. ++++|+.||.|++||+++ ...+..+..|...|.++.|+|. +..++++++.|+
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~-----------------~~~~l~s~~~d~ 344 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPH-----------------NETILASSGTDR 344 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSS-----------------CTTEEEEEETTS
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCC-----------------CCCEEEEEeCCC
Confidence 999999987 689999999999999987 5668888999999999999984 235799999999
Q ss_pred cEEEEECCC--------------CeEEEEEeCCCcCEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCC
Q psy226 315 TIKLWDVGS--------------GSLLFTLIGHDNWVRGVTFHPGGK-YLVSCGDDKTLRVWDTANK 366 (406)
Q Consensus 315 ~i~lwd~~~--------------~~~~~~~~~h~~~v~~l~~s~~g~-~l~sgs~d~~i~vwd~~~~ 366 (406)
.|++||+.. ..++..+.+|...|++++|+|+++ +|++++.||.|+||++...
T Consensus 345 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 345 RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 999999976 467888889999999999999999 8999999999999998754
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-38 Score=303.08 Aligned_cols=260 Identities=9% Similarity=0.031 Sum_probs=218.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEE
Q psy226 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184 (406)
Q Consensus 105 h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~ 184 (406)
-...|.+|+|+|||+++||++.|++|+ |...+ +.+.+|...|.+++|+|+| .++.+.+|+..... ..
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~-~~ 80 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG-LL 80 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC-SS
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCce-Ee
Confidence 346789999999999999999999999 75544 4457999999999999998 56776666654322 11
Q ss_pred EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCc-----cEEEEEECCCCCEEEEEeCCCeEEEE
Q psy226 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE-----WVRQIKVSPDGTLLASCSNDHTARVW 259 (406)
Q Consensus 185 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~s~~~d~~v~vw 259 (406)
++ .|...|.+++|+|+|..|++++.||+|++||..+ ++..+. |.. .+.+++|+|||++||+|+.||+|++|
T Consensus 81 ~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 81 NS-QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp TT-SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred ec-CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 22 4578899999999999999999999999999654 666677 665 49999999999999999999999999
Q ss_pred eCCCccc-------eeEE----ecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeE--
Q psy226 260 SLATKET-------KAEL----RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSL-- 326 (406)
Q Consensus 260 d~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~-- 326 (406)
|+.++.. +..+ .+|...|.+++|+|+ | +++++.|++|++||+..+..
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd------------------g--Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED------------------V--LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT------------------E--EEEEETTCCEEEECCCSSSSCC
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCC------------------c--EEEEeCCCeEEEEECCCCcccc
Confidence 9988753 4555 677889999999983 5 88999999999999988763
Q ss_pred -EEEE-eCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEE--eCCCCEEEEeeCCCeEEE
Q psy226 327 -LFTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF--HRAHPYVVTGSVDKTVKV 402 (406)
Q Consensus 327 -~~~~-~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~--~~~~~~l~sgs~Dg~v~i 402 (406)
..++ .+|...|.+++|+ |+.|++++ +++|++||+.+++......+|...|.+++| +|++..|++++.||+ ++
T Consensus 217 ~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-kl 292 (588)
T 2j04_A 217 VSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KV 292 (588)
T ss_dssp CEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EE
T ss_pred ceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EE
Confidence 3566 4788899999999 68999997 699999999987764333379999999999 999999999999999 99
Q ss_pred eec
Q psy226 403 WEC 405 (406)
Q Consensus 403 w~~ 405 (406)
|..
T Consensus 293 w~~ 295 (588)
T 2j04_A 293 LLE 295 (588)
T ss_dssp EES
T ss_pred Eee
Confidence 975
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.9e-37 Score=289.42 Aligned_cols=244 Identities=15% Similarity=0.191 Sum_probs=201.2
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEE-----------eCCCcEEEEEcCCCcEE----EEe-----cccccCeeeEEECCC
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASC-----------SEDATIRLWDYETGEYE----RAL-----HGHLDSVQDIAFDQS 159 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latg-----------s~dg~v~vwd~~~~~~~----~~~-----~~h~~~V~~l~~~~~ 159 (406)
..|.+|...|.+++++ ++.+++| +.|+++++|++.+.... ... ..+...+.+++|+||
T Consensus 67 ~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4577899999888765 4555554 56888999998765321 111 123456889999999
Q ss_pred CCEEEEEe--CCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEE--EeecCCccE
Q psy226 160 GKLLVSCS--ADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK--TLTGHREWV 235 (406)
Q Consensus 160 g~~l~sgs--~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~--~~~~~~~~v 235 (406)
|++|++++ .|++|+|||+.+++++..+. |...|.+++|+|+|+++++++.| .+.+|+..++..+. ...+|...|
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCE
Confidence 99987554 68999999999999888875 77889999999999999999855 56677777776554 345788899
Q ss_pred EEEEECCCCCEEEEEeCCC----eEEEEeCCCccc----eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEE
Q psy226 236 RQIKVSPDGTLLASCSNDH----TARVWSLATKET----KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYL 307 (406)
Q Consensus 236 ~~l~~~~~~~~l~s~~~d~----~v~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 307 (406)
.+++|+|++.++++++.|+ .+++|++..... ...+.+|...|.+++|+| +|.+|
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp------------------dg~~l 284 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM------------------KGELA 284 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT------------------TSCEE
T ss_pred EEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC------------------CCCce
Confidence 9999999999999999887 688898865543 345778999999999998 47899
Q ss_pred EEEeCCCcEEEEECCCCeEEEEE-eCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy226 308 ATGSRDKTIKLWDVGSGSLLFTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365 (406)
Q Consensus 308 ~s~~~d~~i~lwd~~~~~~~~~~-~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~ 365 (406)
|+|+.|++|+|||+.+++++..+ .+|...|++|+|+|||++|+|||.|++|+|||+..
T Consensus 285 asgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 285 VLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 99999999999999999999886 68999999999999999999999999999999864
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=287.56 Aligned_cols=281 Identities=21% Similarity=0.305 Sum_probs=209.3
Q ss_pred cCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCC---CEEEEEeCCCcEEEEeCCC
Q psy226 104 GHRSPVIKVIFHP-VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG---KLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 104 ~h~~~V~~v~~~p-~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g---~~l~sgs~d~~i~vwd~~~ 179 (406)
+|..+|++++|+| ++.+|++|+.||.|++||+.+++....+. +...+.++.|++.+ .++++|+.|+.|++||+.+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS 175 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC
Confidence 6999999999999 77899999999999999999998877766 77889999998854 5999999999999999999
Q ss_pred CeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCe-EEEEe---------------ecCCccEEEEEECC
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGY-CVKTL---------------TGHREWVRQIKVSP 242 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~-~~~~~---------------~~~~~~v~~l~~~~ 242 (406)
++.+..+.+|...|.+++|+|++. ++++|+.|+.|++||++++. ++..+ .+|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 999999999999999999999998 58999999999999998765 44444 57889999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCccceeEEecCCceE----EEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEE
Q psy226 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTV----ECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKL 318 (406)
Q Consensus 243 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~l 318 (406)
++++|++++.|+.|++||+.+......+..+.... ....+. ...+..+++++.|+.|++
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~i~v 318 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVS-----------------CGCSSEFVFVPYGSTIAV 318 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEEC-----------------CSSSSCEEEEEETTEEEE
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEe-----------------cCCCceEEEEecCCEEEE
Confidence 99999999999999999998876554333221100 000000 112445777888999999
Q ss_pred EECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeC-CCCEEEEeeCC
Q psy226 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR-AHPYVVTGSVD 397 (406)
Q Consensus 319 wd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~-~~~~l~sgs~D 397 (406)
||+.+++++..+.+|...|++++|+|++++|++|+.||.|++||+.+++.+.....+.. ...+.+ ......+++.|
T Consensus 319 ~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 395 (408)
T 4a11_B 319 YTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEE 395 (408)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------------------------------
T ss_pred EECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCcc
Confidence 99999999999999999999999999999999999999999999999887765543322 122333 23345667889
Q ss_pred CeEEEeec
Q psy226 398 KTVKVWEC 405 (406)
Q Consensus 398 g~v~iw~~ 405 (406)
+.+++|+.
T Consensus 396 ~~~~~W~~ 403 (408)
T 4a11_B 396 GGTSAWSH 403 (408)
T ss_dssp --------
T ss_pred CceeecCC
Confidence 99999985
No 108
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.8e-36 Score=284.22 Aligned_cols=278 Identities=18% Similarity=0.188 Sum_probs=240.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE-----EecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER-----ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ 181 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~-----~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~ 181 (406)
..+.+++|+|++.++++++.|+.|++||..+++... .+.+|...|.+++|++++.++++++.|+.|++||+.+++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 446699999988888999999999999999998877 345788899999999999999999999999999999999
Q ss_pred EEEEEecCCcceEEEEEecCCCEEE-EEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEe--------C
Q psy226 182 CLKTMQGHDHNVTGVAFLPNSDFVL-SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS--------N 252 (406)
Q Consensus 182 ~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~--------~ 252 (406)
.+..+..|...+.+++|+|+++.++ +++.|+.|++||+.++..+..+..+ ..+.+++|+|+|+.+++++ .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccC
Confidence 9999999999999999999999885 4558999999999999888887765 4589999999999999888 5
Q ss_pred CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCC-CEEEEEeCCCcEEEEECCCCeEEEEEe
Q psy226 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGG-PYLATGSRDKTIKLWDVGSGSLLFTLI 331 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~lwd~~~~~~~~~~~ 331 (406)
|+.|++||+.+++....+ .|...+..++|+|+ + .++++++.|+.|++||+.+++.+..+.
T Consensus 282 dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~------------------g~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 342 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNT------------------ENKIYVSDMCCSKIEVYDLKEKKVQKSIP 342 (433)
T ss_dssp CEEEEEEETTTTEEEEEE-EEEECEEEEEECSS------------------TTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCeEEEEECCCCcEEeec-cCCCCcceEEECCC------------------CCEEEEEecCCCEEEEEECCCCcEEEEec
Confidence 889999999887665544 45567888999883 4 356777899999999999998887775
Q ss_pred CCCcCEEEEEEcCCCCEEEEEeC---------------CCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeC
Q psy226 332 GHDNWVRGVTFHPGGKYLVSCGD---------------DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV 396 (406)
Q Consensus 332 ~h~~~v~~l~~s~~g~~l~sgs~---------------d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~ 396 (406)
+...+.+++|+|+|++|++++. ||.|++||..+++.+..+..+ ..+.+++|+|++++|++++.
T Consensus 343 -~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 343 -VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDF 420 (433)
T ss_dssp -CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEET
T ss_pred -CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEEC
Confidence 6778999999999999988876 579999999999888888764 46899999999999988764
Q ss_pred -CCeEEEeecC
Q psy226 397 -DKTVKVWECR 406 (406)
Q Consensus 397 -Dg~v~iw~~~ 406 (406)
|+.|++|++.
T Consensus 421 ~d~~i~v~~~~ 431 (433)
T 3bws_A 421 LDHQIRVYRRD 431 (433)
T ss_dssp TTTEEEEEEET
T ss_pred CCCeEEEEEec
Confidence 9999999963
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-36 Score=280.06 Aligned_cols=242 Identities=16% Similarity=0.157 Sum_probs=214.7
Q ss_pred EEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEE
Q psy226 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ---CLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMW 217 (406)
Q Consensus 142 ~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iw 217 (406)
....+|.+.|.+++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|+++ +|++|+.|+.|++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 3446899999999999999999999999999999998766 3456668999999999999999 99999999999999
Q ss_pred Ec-CCCeEEEEeec--CCccEEEEEECCCCCEEEEEeCCCeEEEEeCCC---------ccceeEEecCCceEEEEEeCCC
Q psy226 218 EV-ATGYCVKTLTG--HREWVRQIKVSPDGTLLASCSNDHTARVWSLAT---------KETKAELRGHDHTVECVAWAPG 285 (406)
Q Consensus 218 d~-~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~---------~~~~~~~~~~~~~v~~~~~~~~ 285 (406)
|+ .++.. ..+.+ |...|.+++|+| +.++++++.|+.|++||+++ .+....+. |...+.+++|+|+
T Consensus 85 d~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 85 DLIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS 161 (342)
T ss_dssp CSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred EeccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence 99 87754 77788 999999999999 99999999999999999987 66565555 8889999999873
Q ss_pred CCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC-Ce--EEEEEeCCCcCEEEEEEcC-CCCEEEEEeCCCeEEEE
Q psy226 286 VASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS-GS--LLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLRVW 361 (406)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~-~~--~~~~~~~h~~~v~~l~~s~-~g~~l~sgs~d~~i~vw 361 (406)
.+++++.|+.|++||+++ +. .......|...|.+++|+| ++++|++|+.||.|++|
T Consensus 162 --------------------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~ 221 (342)
T 1yfq_A 162 --------------------RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVE 221 (342)
T ss_dssp --------------------EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEE
T ss_pred --------------------cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEE
Confidence 289999999999999988 54 3345567888999999999 99999999999999999
Q ss_pred eCCCC------ccceeeccccc---------eEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 362 DTANK------RNMKTLEAHSH---------FVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 362 d~~~~------~~~~~l~~h~~---------~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|+... +....+..|.. .|.+++|+|++++|++|+.||.|++||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 222 FFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp ECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred EEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 99876 77778888765 89999999999999999999999999974
No 110
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.4e-37 Score=295.76 Aligned_cols=261 Identities=22% Similarity=0.281 Sum_probs=202.3
Q ss_pred EeccCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEeccc--ccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 101 ALSGHRSPVIKVIFHP-VFSLMASCSEDATIRLWDYETGEYERALHGH--LDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p-~~~~latgs~dg~v~vwd~~~~~~~~~~~~h--~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
.+.||.++|++|+|+| ++.+|+||+.||+|++||+.++........| ...+.+++|+|++.+|++|+.||.|++||+
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~ 238 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNM 238 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEES
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeecc
Confidence 4568999999999998 6889999999999999999887655444433 446789999999999999999999999998
Q ss_pred CCCeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEEE---eecCCccEEEEEECCCCCEEEEEeCC
Q psy226 178 STYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKT---LTGHREWVRQIKVSPDGTLLASCSND 253 (406)
Q Consensus 178 ~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~~---~~~~~~~v~~l~~~~~~~~l~s~~~d 253 (406)
.. +.+..+.+|...|.+++|+|++. ++++|+.|++|++||++++..... ..+|...|++++|+|+|.+|++|+.|
T Consensus 239 ~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D 317 (435)
T 4e54_B 239 DG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQK 317 (435)
T ss_dssp SS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESS
T ss_pred Cc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCC
Confidence 64 55678889999999999999876 788999999999999987654333 35799999999999999999999999
Q ss_pred CeEEEEeCCCccceeEEecCCce------EEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEE
Q psy226 254 HTARVWSLATKETKAELRGHDHT------VECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLL 327 (406)
Q Consensus 254 ~~v~vwd~~~~~~~~~~~~~~~~------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~ 327 (406)
+.|++||+.+......+..|... +....|.|......+. .. ......++++..++.|++||..+++.+
T Consensus 318 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~d~~~~~~~~~~~~~i~iwd~~~g~~~ 391 (435)
T 4e54_B 318 SEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVG---RY---PDPNFKSCTPYELRTIDVFDGNSGKMM 391 (435)
T ss_dssp SCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEE---CC---CCTTSCCSSTTCCCCEEEECSSSCCEE
T ss_pred CEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEE---Ec---CCCCeEEEEecCCCEEEEEECCCCcEE
Confidence 99999999988877777666532 2223444421111000 00 001112223334568999999999998
Q ss_pred EEEe-CCCcCEEEE-EEcCCCCEEEEEeCCCeEEEEeCCCCccc
Q psy226 328 FTLI-GHDNWVRGV-TFHPGGKYLVSCGDDKTLRVWDTANKRNM 369 (406)
Q Consensus 328 ~~~~-~h~~~v~~l-~~s~~g~~l~sgs~d~~i~vwd~~~~~~~ 369 (406)
..+. +|...|.++ +|+|+|++|++|+ |+.|+|||+.+++..
T Consensus 392 ~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 392 CQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp EEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 8765 678888887 6999999999876 789999999887653
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.8e-36 Score=288.28 Aligned_cols=257 Identities=30% Similarity=0.539 Sum_probs=216.3
Q ss_pred ceEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
....+.+|.++|++++| ++.+|++|+.||+|++||+.+++....+.+|...|.+++|++ ..|++|+.|++|++||+
T Consensus 165 ~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~ 240 (435)
T 1p22_A 165 CKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDM 240 (435)
T ss_dssp EEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEEC
T ss_pred EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeC
Confidence 34567899999999999 788999999999999999999999999999999999999974 59999999999999999
Q ss_pred CCCeEE---EEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCC
Q psy226 178 STYQCL---KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254 (406)
Q Consensus 178 ~~~~~~---~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~ 254 (406)
.+++.. ..+.+|...|.+++| +++++++|+.|++|++||++++.++..+.+|...|.++.+ ++.++++|+.||
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg 316 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDN 316 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTS
T ss_pred CCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 876544 677899999999999 6789999999999999999999999999999999999998 478999999999
Q ss_pred eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe---------
Q psy226 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS--------- 325 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~--------- 325 (406)
.|++||++++..+..+.+|...|.++.|. +.++++|+.||.|++||+.++.
T Consensus 317 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~--------------------~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 376 (435)
T 1p22_A 317 TIRLWDIECGACLRVLEGHEELVRCIRFD--------------------NKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 376 (435)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEECC--------------------SSEEEEEETTSCEEEEEHHHHTSTTSCTTTT
T ss_pred eEEEEECCCCCEEEEEeCCcCcEEEEEec--------------------CCEEEEEeCCCcEEEEECCCCCCccccccch
Confidence 99999999999999999999999999883 4589999999999999987665
Q ss_pred EEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEe
Q psy226 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385 (406)
Q Consensus 326 ~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~ 385 (406)
++..+.+|...|.+++| ++.+|++|+.||+|++||+.+......... .....++.|.
T Consensus 377 ~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~ 433 (435)
T 1p22_A 377 CLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEPP-RSPSRTYTYI 433 (435)
T ss_dssp EEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----------------------
T ss_pred heeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCCC-CCCccceeee
Confidence 88899999999999999 688999999999999999987655443322 2344555554
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=9.2e-37 Score=287.75 Aligned_cols=231 Identities=10% Similarity=0.116 Sum_probs=173.3
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCeEEE-----EEecCCcceEEEEEec--------CCCEEEEEeCCCcEEEEEcCCC
Q psy226 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLK-----TMQGHDHNVTGVAFLP--------NSDFVLSASRDKTIKMWEVATG 222 (406)
Q Consensus 156 ~~~~g~~l~sgs~d~~i~vwd~~~~~~~~-----~~~~h~~~v~~~~~~p--------~~~~l~s~s~d~~i~iwd~~~~ 222 (406)
+.+++.+|++|+.|++|++||..++++.. .+.+|...|.+++|+| ++++|++||.|++|+|||+.++
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 34456689999999999999998876532 3578999999999998 7889999999999999999999
Q ss_pred eEEEEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEeCCCccceeEEe-------------------------cCCce
Q psy226 223 YCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLATKETKAELR-------------------------GHDHT 276 (406)
Q Consensus 223 ~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~-------------------------~~~~~ 276 (406)
.++..+.+|...+.+++|+|++ .+|++|+.|++|++||++++....... +|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 8888888999999999999987 489999999999999998765443322 23334
Q ss_pred EEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcC------------
Q psy226 277 VECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP------------ 344 (406)
Q Consensus 277 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~------------ 344 (406)
+.++.|.+ .++..+++++.|+++++||+..++....+..|...+..+.+.|
T Consensus 257 v~~v~~~~-----------------~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (393)
T 4gq1_A 257 LANVRWIG-----------------SDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL 319 (393)
T ss_dssp CSEEEEET-----------------TTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS
T ss_pred ceeeeeec-----------------CCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce
Confidence 44444432 2578899999999999999998887777666655554443333
Q ss_pred --------CCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 345 --------GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 345 --------~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
++.++++|+.||+|++||+.+++....+..|...|.+|+|+|+|++||+++.|| +.+|.
T Consensus 320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 320 GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEE
T ss_pred eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 344678899999999999999998888888999999999999999999999777 44444
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.3e-35 Score=266.72 Aligned_cols=245 Identities=21% Similarity=0.385 Sum_probs=212.0
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCC
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~ 180 (406)
.+.+|...|++++|+|++++||+|+.||+|++||+.+++....+.+|...+.++.+ ++..+++|+.++.+++|+..+.
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~ 139 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA 139 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCC
Confidence 45678899999999999999999999999999999999999999999998887666 5679999999999999998754
Q ss_pred -eEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe----EEEEeecCCccEEEEEECCCCCEE---EEEeC
Q psy226 181 -QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY----CVKTLTGHREWVRQIKVSPDGTLL---ASCSN 252 (406)
Q Consensus 181 -~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~----~~~~~~~~~~~v~~l~~~~~~~~l---~s~~~ 252 (406)
..+..+.+|...+..+.+.++++++++++.|++|++||++++. .......+...|..+.++|++..+ ++++.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 219 (318)
T 4ggc_A 140 EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS 219 (318)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT
T ss_pred ceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC
Confidence 5567888999999999999999999999999999999998764 334556788889999999976533 46678
Q ss_pred CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE--EeCCCcEEEEECCCCeEEEEE
Q psy226 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT--GSRDKTIKLWDVGSGSLLFTL 330 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~i~lwd~~~~~~~~~~ 330 (406)
+++|++||......... ..+...+..+.|.|. +..+++ |+.|+.|++||+++++++..+
T Consensus 220 ~~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~------------------~~~~~~~sg~~d~~i~iwd~~~~~~~~~l 280 (318)
T 4ggc_A 220 DRHIRIWNVCSGACLSA-VDAHSQVCSILWSPH------------------YKELISGHGFAQNQLVIWKYPTMAKVAEL 280 (318)
T ss_dssp TCEEEEEETTTCCEEEE-EECSSCEEEEEEETT------------------TTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred CCEEEEEeccccccccc-ccceeeeeeeeeccc------------------ccceEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 99999999987765544 446677888888874 344544 448999999999999999999
Q ss_pred eCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC
Q psy226 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366 (406)
Q Consensus 331 ~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~ 366 (406)
.+|.+.|++++|+|+|++|+|||.||+|+|||+...
T Consensus 281 ~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 281 KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 999999999999999999999999999999998654
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=289.79 Aligned_cols=256 Identities=7% Similarity=0.085 Sum_probs=210.0
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec-ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCC
Q psy226 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~ 180 (406)
+.||...|++|+|+|+| .++++.+|+.... ..+. .|.+.|.+++|+|+|.+||+++.||+|++||..+
T Consensus 48 l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~---~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~- 116 (588)
T 2j04_A 48 INCNSKNLFHVKEFPLE-------FENKLDFELAQQN---GLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK- 116 (588)
T ss_dssp CSSBGGGTEEEEEECCC-------CCCTTTTSCCCSS---CSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-
T ss_pred ecCCCccEEEEEECCCC-------CcceEEEEeCCCc---eEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-
Confidence 47999999999999998 4666666554322 2333 5678999999999999999999999999999654
Q ss_pred eEEEEEecCCc-----ceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe-------EEEEe----ecCCccEEEEEECCCC
Q psy226 181 QCLKTMQGHDH-----NVTGVAFLPNSDFVLSASRDKTIKMWEVATGY-------CVKTL----TGHREWVRQIKVSPDG 244 (406)
Q Consensus 181 ~~~~~~~~h~~-----~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~-------~~~~~----~~~~~~v~~l~~~~~~ 244 (406)
++..+. |.. .|.+++|+|+|++|++|+.||+|++||+.++. .+.++ .+|..+|.+++|+|+|
T Consensus 117 -~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 117 -MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp -EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred -eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 666666 665 49999999999999999999999999999875 36776 6778899999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCccc---eeEE-ecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEE
Q psy226 245 TLLASCSNDHTARVWSLATKET---KAEL-RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWD 320 (406)
Q Consensus 245 ~~l~s~~~d~~v~vwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd 320 (406)
+++++.|++|++||+..... ...+ .+|...|.+++|+ + .++++++ +++|++||
T Consensus 195 --Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g-------------------~~LASa~-~~tIkLWd 251 (588)
T 2j04_A 195 --LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-D-------------------YKVVLTC-PGYVHKID 251 (588)
T ss_dssp --EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-T-------------------TEEEEEC-SSEEEEEE
T ss_pred --EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-C-------------------CEEEEEe-CCeEEEEE
Confidence 88899999999999987663 2456 4788899999996 2 3688887 69999999
Q ss_pred CCCCeEEEEEeCCCcCEEEEEE--cCCCCEEEEEeCCCeEEEEeCCC-----------------------Cccceeeccc
Q psy226 321 VGSGSLLFTLIGHDNWVRGVTF--HPGGKYLVSCGDDKTLRVWDTAN-----------------------KRNMKTLEAH 375 (406)
Q Consensus 321 ~~~~~~~~~~~~h~~~v~~l~~--s~~g~~l~sgs~d~~i~vwd~~~-----------------------~~~~~~l~~h 375 (406)
+.+++......+|.+.|..++| +|++..|++++.||+ ++|.... +..+..+++
T Consensus 252 ~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~- 329 (588)
T 2j04_A 252 LKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET- 329 (588)
T ss_dssp TTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-
T ss_pred CCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-
Confidence 9988875444489999999999 999999999999999 9998631 111223333
Q ss_pred cceEEEEEEeCCCCEEEEee
Q psy226 376 SHFVTSLDFHRAHPYVVTGS 395 (406)
Q Consensus 376 ~~~v~~l~~~~~~~~l~sgs 395 (406)
...|.+++|+|+|+.+|+++
T Consensus 330 ~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 330 TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp EEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEEECCCCCEEEEEE
Confidence 44699999999999999886
No 115
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.1e-36 Score=286.11 Aligned_cols=247 Identities=21% Similarity=0.364 Sum_probs=215.8
Q ss_pred EeccCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCC-------cEEEEecccccCeeeEEECCCC-CEEEEEeCCCc
Q psy226 101 ALSGHRSPVIKVIFHP-VFSLMASCSEDATIRLWDYETG-------EYERALHGHLDSVQDIAFDQSG-KLLVSCSADMS 171 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p-~~~~latgs~dg~v~vwd~~~~-------~~~~~~~~h~~~V~~l~~~~~g-~~l~sgs~d~~ 171 (406)
.+.+|.++|++++|+| ++.+|++|+.||+|++||+.++ +....+.+|...|.+++|+|++ .+|++|+.|++
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 155 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNV 155 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSC
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCE
Confidence 4679999999999999 8999999999999999999987 5577888999999999999998 69999999999
Q ss_pred EEEEeCCCCeEEEEE--ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEe-ecCCcc-EEEEEECCCCCEE
Q psy226 172 LKLWDMSTYQCLKTM--QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL-TGHREW-VRQIKVSPDGTLL 247 (406)
Q Consensus 172 i~vwd~~~~~~~~~~--~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~~~~~-v~~l~~~~~~~~l 247 (406)
|++||+.+++.+..+ .+|...|.+++|+|++++|++++.|+.|++||++++..+..+ .+|... +..+.|+|++.++
T Consensus 156 i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 156 ILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 999999999999999 789999999999999999999999999999999999999988 788776 8999999999999
Q ss_pred EEE---eCCCeEEEEeCCCccc-eeEEe-cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEE-EEeCCCcEEEEEC
Q psy226 248 ASC---SNDHTARVWSLATKET-KAELR-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA-TGSRDKTIKLWDV 321 (406)
Q Consensus 248 ~s~---~~d~~v~vwd~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~lwd~ 321 (406)
++| +.|+.|++||+++... ..... .|...+.++.|+|+ +.+++ +|+.|+.|++||+
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~------------------~~~l~~~g~~dg~i~i~d~ 297 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPD------------------TNIVYLCGKGDSSIRYFEI 297 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETT------------------TTEEEEEETTCSCEEEEEE
T ss_pred EEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCC------------------CCEEEEEEcCCCeEEEEEe
Confidence 999 7999999999987654 32332 56778899999984 55665 5667999999999
Q ss_pred CCCeE-EEEEeC--CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy226 322 GSGSL-LFTLIG--HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 322 ~~~~~-~~~~~~--h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~ 367 (406)
.+++. +..+.. |...|.+++|+|++.++++ .++.+++|++.++.
T Consensus 298 ~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 298 TSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp CSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred cCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 98773 334433 5689999999999998875 56799999987654
No 116
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.3e-36 Score=286.78 Aligned_cols=259 Identities=14% Similarity=0.148 Sum_probs=187.3
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEE-----EecccccCeeeEEECC--------CCCEEEEEeCCC
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER-----ALHGHLDSVQDIAFDQ--------SGKLLVSCSADM 170 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~-----~~~~h~~~V~~l~~~~--------~g~~l~sgs~d~ 170 (406)
.|...+....+++++.+||+|+.|++|+|||..+++... .+.+|.+.|++|+|+| +|++|++||.|+
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 455555556666777899999999999999999886533 3679999999999987 789999999999
Q ss_pred cEEEEeCCCCeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEEE----------------------
Q psy226 171 SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKT---------------------- 227 (406)
Q Consensus 171 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~~---------------------- 227 (406)
+|+|||+.++.++..+.+|..+|.+++|+|++. +|++|+.|++|++||++++.....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 999999998888888889999999999999875 799999999999999988754322
Q ss_pred ---eecCCccEEEEEEC-CCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccc--cCCCCCC
Q psy226 228 ---LTGHREWVRQIKVS-PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEA--AGRPPGQ 301 (406)
Q Consensus 228 ---~~~~~~~v~~l~~~-~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~ 301 (406)
..+|...+.++.|+ |+++.+++++.|+++++||+........+..|...+..+.+.|.......... .......
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 23577788889886 79999999999999999999988888888888888877777765322111000 0001112
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy226 302 GGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363 (406)
Q Consensus 302 ~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~ 363 (406)
.++.++++|+.|+.|++||+.++.++..+.+|...|++++|+|+|++||++++|| +.+|.+
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 3456788899999999999999998888889999999999999999999999877 555554
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.9e-34 Score=268.48 Aligned_cols=264 Identities=17% Similarity=0.182 Sum_probs=227.1
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEE
Q psy226 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL-VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVA 197 (406)
Q Consensus 119 ~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l-~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~ 197 (406)
.++++++.|++|++||+.+++....+.+|. .+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..+. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 468899999999999999999988888764 58999999999977 677799999999999999988887665 899999
Q ss_pred EecCCCEEEE-EeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE-EEEeCCCeEEEEeCCCccceeEEecCCc
Q psy226 198 FLPNSDFVLS-ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL-ASCSNDHTARVWSLATKETKAELRGHDH 275 (406)
Q Consensus 198 ~~p~~~~l~s-~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~d~~v~vwd~~~~~~~~~~~~~~~ 275 (406)
|+|++++|++ ++.|+.|++||+.++..+..+..+. .+.+++|+|+|+.+ ++++.|+.|++||+.+++....+..+.
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~- 158 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR- 158 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-
Confidence 9999998754 5567999999999999888877654 57999999999977 788889999999999888877777664
Q ss_pred eEEEEEeCCCCCccccccccCCCCCCCCCCEE-EEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEe-
Q psy226 276 TVECVAWAPGVASESISEAAGRPPGQGGGPYL-ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG- 353 (406)
Q Consensus 276 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs- 353 (406)
.+.++.|+|+ +.++ ++++.|+.|++||+++++.+..+. +...+.+++|+|+|++|++++
T Consensus 159 ~~~~~~~~~d------------------g~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 159 SPKGIAVTPD------------------GTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp SEEEEEECTT------------------SSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEE
T ss_pred CcceEEECCC------------------CCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEec
Confidence 4588899883 5555 677889999999999998887765 456789999999999999888
Q ss_pred --CCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEE-EEeeCCCeEEEeecC
Q psy226 354 --DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV-VTGSVDKTVKVWECR 406 (406)
Q Consensus 354 --~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l-~sgs~Dg~v~iw~~~ 406 (406)
.++.|++||+.+++.+..+..|. .+.+++|+|++++| ++++.|+.|++||+.
T Consensus 220 ~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 220 DKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp CSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 68999999999998888887765 47899999999977 678899999999963
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-34 Score=266.47 Aligned_cols=252 Identities=18% Similarity=0.277 Sum_probs=213.2
Q ss_pred EEcCCCcEEEEecccccCeeeEEECCC---CCEEEEEeCCCcEEEEeCCC-CeEE-EEEecCCcceEEEEEecCCCEEEE
Q psy226 133 WDYETGEYERALHGHLDSVQDIAFDQS---GKLLVSCSADMSLKLWDMST-YQCL-KTMQGHDHNVTGVAFLPNSDFVLS 207 (406)
Q Consensus 133 wd~~~~~~~~~~~~h~~~V~~l~~~~~---g~~l~sgs~d~~i~vwd~~~-~~~~-~~~~~h~~~v~~~~~~p~~~~l~s 207 (406)
|+....+....+.+|.+.|++++|+|+ |++|++|+.||.|++||+.+ +..+ ..+.+|...|.+++|+|++++|++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 344555667788999999999999999 69999999999999999986 5544 788899999999999999999999
Q ss_pred EeCCCcEEEEEcCCCeEEEEeecCCccEEEEEE--CCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCC
Q psy226 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV--SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG 285 (406)
Q Consensus 208 ~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 285 (406)
++.|+.|++||+.++..+. +.+|...|.+++| +|++.+|++++.|+.|++||+++.+....+..+. .+.++.+.+
T Consensus 104 ~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~- 180 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVIY- 180 (368)
T ss_dssp EETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEET-
T ss_pred EcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEecC-
Confidence 9999999999999988766 5679999999999 9999999999999999999999998888887765 444555443
Q ss_pred CCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCEEEEEEcCCCCE----EEEEeCCCeEE
Q psy226 286 VASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGKY----LVSCGDDKTLR 359 (406)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~--~h~~~v~~l~~s~~g~~----l~sgs~d~~i~ 359 (406)
..+++++.++.+++||++......... .+...+.++++.++... +++|+.||.|+
T Consensus 181 -------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~ 241 (368)
T 3mmy_A 181 -------------------PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVA 241 (368)
T ss_dssp -------------------TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEE
T ss_pred -------------------CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEE
Confidence 368899999999999998765544332 23445666666665544 99999999999
Q ss_pred EEeCCCC---ccceeeccccc------------eEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 360 VWDTANK---RNMKTLEAHSH------------FVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 360 vwd~~~~---~~~~~l~~h~~------------~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+||+... ..+..+..|.. .|++++|+|++++|++|+.||.|++||++
T Consensus 242 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 242 IHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp EEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred EEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECC
Confidence 9999877 55677777776 69999999999999999999999999974
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.5e-35 Score=270.52 Aligned_cols=245 Identities=13% Similarity=0.174 Sum_probs=190.3
Q ss_pred EEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEE-EEEeC
Q psy226 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV-LSASR 210 (406)
Q Consensus 132 vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~ 210 (406)
+|++.+.+......+|...|++++|+|+|++|++|+.|+ +++||+.+++....... ..+..+++.++++.+ ++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC
Confidence 456666666666788999999999999999999998775 78999988776554432 357788899988877 56888
Q ss_pred CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCc-cceeEEecCCceEEEEEeCCCCCcc
Q psy226 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK-ETKAELRGHDHTVECVAWAPGVASE 289 (406)
Q Consensus 211 d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~ 289 (406)
|++|++||..++.++..+. +...|.+++++++. ++++ .|+.|++||+.+. +.+..+.. +...++++|
T Consensus 80 d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~----- 147 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN----- 147 (355)
T ss_dssp TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-----
T ss_pred ccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc-----
Confidence 8999999999999988886 66789999999875 3333 4889999999887 55554443 333344443
Q ss_pred ccccccCCCCCCCCCCEEEE--EeCCCcEEEEECCCCe----------------EEEEEeCCCcCEEEEEEcCCCCEEEE
Q psy226 290 SISEAAGRPPGQGGGPYLAT--GSRDKTIKLWDVGSGS----------------LLFTLIGHDNWVRGVTFHPGGKYLVS 351 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s--~~~d~~i~lwd~~~~~----------------~~~~~~~h~~~v~~l~~s~~g~~l~s 351 (406)
.+++. |+.||.|++||+.++. ++..+.+|...|++++|+|+|++|++
T Consensus 148 ---------------~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 148 ---------------GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp ---------------TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ---------------cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 24555 6899999999998865 26788999999999999999999999
Q ss_pred EeCCCe-EEEEeCCCCccceeec-c-ccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 352 CGDDKT-LRVWDTANKRNMKTLE-A-HSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 352 gs~d~~-i~vwd~~~~~~~~~l~-~-h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
|+.|++ |++||+.+++.+.++. + |...|++++|+|++++|++|+.||+|++||++
T Consensus 213 ~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 999998 9999999999999997 5 99999999999999999999999999999973
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=6.9e-35 Score=261.68 Aligned_cols=286 Identities=12% Similarity=0.085 Sum_probs=199.5
Q ss_pred eEEEEEcCCCC---EEEEEeCCCcEEEEEcCCC---cEEEEecccccCeeeEEECCCCC-EEEEEeCCCcEE-EEeC--C
Q psy226 109 VIKVIFHPVFS---LMASCSEDATIRLWDYETG---EYERALHGHLDSVQDIAFDQSGK-LLVSCSADMSLK-LWDM--S 178 (406)
Q Consensus 109 V~~v~~~p~~~---~latgs~dg~v~vwd~~~~---~~~~~~~~h~~~V~~l~~~~~g~-~l~sgs~d~~i~-vwd~--~ 178 (406)
+.++-|-..+- .++++++ .+|++|+..++ +...+.++|..+|..+.+.||.. ++.++-..-.+. ++-+ .
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 44555544332 5666665 68999999998 78889999999999999988643 222222221111 1111 1
Q ss_pred CC----eEEEEEecCCcceEEEEEecCCCEEEEEe--CCCcEEEEEc-CCCeEEEEeecCCccEEEEEECC---CCCEEE
Q psy226 179 TY----QCLKTMQGHDHNVTGVAFLPNSDFVLSAS--RDKTIKMWEV-ATGYCVKTLTGHREWVRQIKVSP---DGTLLA 248 (406)
Q Consensus 179 ~~----~~~~~~~~h~~~v~~~~~~p~~~~l~s~s--~d~~i~iwd~-~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~ 248 (406)
.. .....-.+|...|.++ ++++++.+++ .|+.|++|++ .+|+.+..+.+|+..++.++|+| ++.+|+
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~La 197 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALL 197 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEE
T ss_pred CCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEE
Confidence 10 1111113444445443 5655555533 5999999999 55888889999999999999999 779999
Q ss_pred EEeCCCeEEEEeCCCccceeEEecCC---ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe
Q psy226 249 SCSNDHTARVWSLATKETKAELRGHD---HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS 325 (406)
Q Consensus 249 s~~~d~~v~vwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~ 325 (406)
+|+.|++|+|||+.+++.+..+.+|. ..+.+++|+|+....... ..+ .....+++|+.|++|++||..+++
T Consensus 198 SgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~---s~~---~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 198 GTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVL---SHP---CAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEE---C---------------CCEEEEEEETTTTE
T ss_pred EecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEe---ccC---CCcceeeccCCCcEEEEEECCCCE
Confidence 99999999999999999999998654 356777898852111000 000 011246889999999999999999
Q ss_pred EEEEE-----eCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEE-EEEEeCCCCEEEEeeCCCe
Q psy226 326 LLFTL-----IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVT-SLDFHRAHPYVVTGSVDKT 399 (406)
Q Consensus 326 ~~~~~-----~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~-~l~~~~~~~~l~sgs~Dg~ 399 (406)
.+..+ .+|...+.+..++ +.++++|+.|++|+|||+.++++++++.+|...+. +++|+|++++|+||+.|++
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~T 349 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGN 349 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSC
T ss_pred EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 87765 3776665544444 88999999999999999999999999999877654 6899999999999999999
Q ss_pred EEEeecC
Q psy226 400 VKVWECR 406 (406)
Q Consensus 400 v~iw~~~ 406 (406)
|+|||+.
T Consensus 350 IklWd~~ 356 (356)
T 2w18_A 350 IFVYHYS 356 (356)
T ss_dssp EEEEEEC
T ss_pred EEEecCC
Confidence 9999974
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=276.75 Aligned_cols=240 Identities=15% Similarity=0.237 Sum_probs=208.7
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe---EEEEEecC------------------------------------
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ---CLKTMQGH------------------------------------ 189 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~---~~~~~~~h------------------------------------ 189 (406)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578999999999966655 57899999998888 65555433
Q ss_pred ------------------CcceEEEEEecCCCEE-EEEeCCCcEEEEEcC--CCeEEEEee--cCCccEEEEEECCCCCE
Q psy226 190 ------------------DHNVTGVAFLPNSDFV-LSASRDKTIKMWEVA--TGYCVKTLT--GHREWVRQIKVSPDGTL 246 (406)
Q Consensus 190 ------------------~~~v~~~~~~p~~~~l-~s~s~d~~i~iwd~~--~~~~~~~~~--~~~~~v~~l~~~~~~~~ 246 (406)
...|.+++|+|++++| ++|+.|++|++||+. ++.++..+. .|...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 3369999999999996 889999999999999 888888876 56789999999999999
Q ss_pred EEEEeCCCeEEEEeCCCcccee----EEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECC
Q psy226 247 LASCSNDHTARVWSLATKETKA----ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG 322 (406)
Q Consensus 247 l~s~~~d~~v~vwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~ 322 (406)
|++|+.|+.+++|++.+..... .+.+|...|.+++|+|+. ..+.+|++|+.|+.|++||++
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~---------------~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDS---------------DGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECT---------------TSCEEEEEEETTSCEEEEEES
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCC---------------CCCcEEEEEcCCCcEEEEECC
Confidence 9999999999999998776544 678899999999999831 026789999999999999999
Q ss_pred CCeEEEE-EeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc-------------------------c
Q psy226 323 SGSLLFT-LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH-------------------------S 376 (406)
Q Consensus 323 ~~~~~~~-~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h-------------------------~ 376 (406)
++.++.. +.+|...|.+++|+ ++++|++|+.|++|++||+.+++.+..+..+ .
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE 307 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred CCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence 9988877 55899999999999 9999999999999999999999888777532 3
Q ss_pred ceEEEEEEeCCCCEEEEee-CCCeEEEeec
Q psy226 377 HFVTSLDFHRAHPYVVTGS-VDKTVKVWEC 405 (406)
Q Consensus 377 ~~v~~l~~~~~~~~l~sgs-~Dg~v~iw~~ 405 (406)
..|.+++|+|++++|++++ .|+.|++|++
T Consensus 308 ~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 308 FAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred EEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 4689999999999999998 8999999997
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.1e-34 Score=264.08 Aligned_cols=260 Identities=19% Similarity=0.270 Sum_probs=196.0
Q ss_pred eEEeccCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCC---------cEEEEecccccCeeeEEECCC--CCEEEE
Q psy226 99 KFALSGHRSPVIKVIFHP--VFSLMASCSEDATIRLWDYETG---------EYERALHGHLDSVQDIAFDQS--GKLLVS 165 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p--~~~~latgs~dg~v~vwd~~~~---------~~~~~~~~h~~~V~~l~~~~~--g~~l~s 165 (406)
...+.+|..+|++++|+| ++.+|++|+.||+|++||+.++ +....+.+|...|.+++|+|+ +.+|++
T Consensus 50 ~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 129 (351)
T 3f3f_A 50 SDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC 129 (351)
T ss_dssp EEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred cceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEE
Confidence 345679999999999999 5999999999999999999887 557778899999999999999 999999
Q ss_pred EeCCCcEEEEeCCCCeEEEEEe-------------cCCcceEEEEEecC---CCEEEEEeCCCcEEEEEcCCCeE--EEE
Q psy226 166 CSADMSLKLWDMSTYQCLKTMQ-------------GHDHNVTGVAFLPN---SDFVLSASRDKTIKMWEVATGYC--VKT 227 (406)
Q Consensus 166 gs~d~~i~vwd~~~~~~~~~~~-------------~h~~~v~~~~~~p~---~~~l~s~s~d~~i~iwd~~~~~~--~~~ 227 (406)
|+.|+.|++||+.+++.+..+. +|...+.+++|+|+ +.++++++.|+.+.+|+...+.. +..
T Consensus 130 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (351)
T 3f3f_A 130 LGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK 209 (351)
T ss_dssp EETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEE
T ss_pred ecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeee
Confidence 9999999999998765432221 57788999999997 89999999999998888877764 677
Q ss_pred eecCCccEEEEEECCCC----CEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCC
Q psy226 228 LTGHREWVRQIKVSPDG----TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGG 303 (406)
Q Consensus 228 ~~~~~~~v~~l~~~~~~----~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (406)
+.+|...|.+++|+|++ ++|++|+.||.|++||++..........+..........+... ..
T Consensus 210 ~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 275 (351)
T 3f3f_A 210 LPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVD--------------MD 275 (351)
T ss_dssp CCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------------
T ss_pred cCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccc--------------cc
Confidence 88999999999999998 8999999999999999986544333222222222221111100 00
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee
Q psy226 304 GPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372 (406)
Q Consensus 304 ~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l 372 (406)
......+.....+.+|+....+.+..+.+|...|++++|+|++++|++|+.||.|++||+.+++.+..+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 276 AQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ---------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred cccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 111223344556778887778889999999999999999999999999999999999999987655444
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=266.89 Aligned_cols=226 Identities=11% Similarity=0.086 Sum_probs=190.5
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcC---------CCeEEE
Q psy226 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA---------TGYCVK 226 (406)
Q Consensus 156 ~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~---------~~~~~~ 226 (406)
+.+++.+|++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. ++..+.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 34578899999999999999999998887776 467888889988 9999999999999665 455444
Q ss_pred Eee-cCCccEEEEEECC--CCCEEEEEeCCCeEEEEeCCCccceeEEe-cCCceEEEEEeCCCCCccccccccCCCCCCC
Q psy226 227 TLT-GHREWVRQIKVSP--DGTLLASCSNDHTARVWSLATKETKAELR-GHDHTVECVAWAPGVASESISEAAGRPPGQG 302 (406)
Q Consensus 227 ~~~-~~~~~v~~l~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (406)
.+. +|...|.+++|+| +++++++|+.||+|++||+++++...... .|...+.+++|+|
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p------------------ 180 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK------------------ 180 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT------------------
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC------------------
Confidence 444 6778999999999 99999999999999999999888766553 4555799999998
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEE-EEEeC-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc---ccc
Q psy226 303 GGPYLATGSRDKTIKLWDVGSGSLL-FTLIG-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA---HSH 377 (406)
Q Consensus 303 ~~~~l~s~~~d~~i~lwd~~~~~~~-~~~~~-h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~---h~~ 377 (406)
++.++++|+.|+.|++||+++++.+ ..+.+ |...|++++|+|+|.+|++++++ .|++||+++++.+.++.. |..
T Consensus 181 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~ 259 (343)
T 3lrv_A 181 DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEF 259 (343)
T ss_dssp TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC---
T ss_pred CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccc
Confidence 4779999999999999999999887 78888 99999999999999999999954 999999998877666543 434
Q ss_pred eEE--EEEEeCCCCEEEEeeC-CCeEEEeec
Q psy226 378 FVT--SLDFHRAHPYVVTGSV-DKTVKVWEC 405 (406)
Q Consensus 378 ~v~--~l~~~~~~~~l~sgs~-Dg~v~iw~~ 405 (406)
.+. +++|+|++++|++|+. |+.|++|++
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 444 6999999999999998 999999986
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.2e-32 Score=254.10 Aligned_cols=281 Identities=18% Similarity=0.208 Sum_probs=229.6
Q ss_pred EeccCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEE-EeCCCcEEEEeCC
Q psy226 101 ALSGHRSPVIKVIFHPVFSLM-ASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVS-CSADMSLKLWDMS 178 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~l-atgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~s-gs~d~~i~vwd~~ 178 (406)
.+.+|. .+.+++|+|+++.+ ++++.|++|++||..+++....+..+. .+.+++|+|+|++|+. ++.|+.|++||+.
T Consensus 27 ~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 27 TIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp EEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 455554 58999999999976 678899999999999999888887655 8999999999998754 5567999999999
Q ss_pred CCeEEEEEecCCcceEEEEEecCCCEE-EEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE-EEEeCCCeE
Q psy226 179 TYQCLKTMQGHDHNVTGVAFLPNSDFV-LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL-ASCSNDHTA 256 (406)
Q Consensus 179 ~~~~~~~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~d~~v 256 (406)
+++.+..+..+ ..+.+++|+|+++.+ ++++.|+.|++||+.++..+..+..+. .+..++|+|+++.+ ++++.|+.|
T Consensus 105 ~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 105 SNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp TTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEE
T ss_pred CCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEE
Confidence 99988877755 468999999999977 688889999999999999888887664 46899999999887 677889999
Q ss_pred EEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe---CCCcEEEEECCCCeEEEEEeCC
Q psy226 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS---RDKTIKLWDVGSGSLLFTLIGH 333 (406)
Q Consensus 257 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---~d~~i~lwd~~~~~~~~~~~~h 333 (406)
++||+.+......+. +...+.+++|+| ++.++++++ .++.|++||+.+++.+..+..|
T Consensus 183 ~~~d~~~~~~~~~~~-~~~~~~~~~~~~------------------~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 243 (391)
T 1l0q_A 183 SVIDTVTNSVIDTVK-VEAAPSGIAVNP------------------EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243 (391)
T ss_dssp EEEETTTTEEEEEEE-CSSEEEEEEECT------------------TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC
T ss_pred EEEECCCCeEEEEEe-cCCCccceEECC------------------CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC
Confidence 999999887666655 456788899988 366777777 6899999999999998888876
Q ss_pred CcCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCccceeeccccceEE---EEE------------EeCCC---------
Q psy226 334 DNWVRGVTFHPGGKYL-VSCGDDKTLRVWDTANKRNMKTLEAHSHFVT---SLD------------FHRAH--------- 388 (406)
Q Consensus 334 ~~~v~~l~~s~~g~~l-~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~---~l~------------~~~~~--------- 388 (406)
. .+.+++|+|+|++| ++++.|+.|++||+.+++.+..+..|..+.. .+. |+.+.
T Consensus 244 ~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~ 322 (391)
T 1l0q_A 244 P-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSE 322 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTC
T ss_pred C-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccc
Confidence 5 47899999999987 6778899999999999988888876654421 022 22211
Q ss_pred -CEEEEeeCCCeEEEeec
Q psy226 389 -PYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 389 -~~l~sgs~Dg~v~iw~~ 405 (406)
-.+.+.+.|..+++|+.
T Consensus 323 ~~~~~~~~~~~~~~~W~~ 340 (391)
T 1l0q_A 323 PVQFTDLSKDATEWKWDF 340 (391)
T ss_dssp CEEEEECCBSCSEEEEEC
T ss_pred eEEEEeCCCCceEEEEEC
Confidence 24666778899999986
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.5e-33 Score=251.59 Aligned_cols=235 Identities=16% Similarity=0.130 Sum_probs=172.3
Q ss_pred ceEEeccCCCCeEEEEEcCCCC-EEEEE---------------eCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCC
Q psy226 98 EKFALSGHRSPVIKVIFHPVFS-LMASC---------------SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161 (406)
Q Consensus 98 ~~~~l~~h~~~V~~v~~~p~~~-~latg---------------s~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~ 161 (406)
..+++.+|..||..|++.|+.. ++..+ ..|+.+.-|.+ -.+|...|.++ ++|+
T Consensus 78 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~--------s~g~~~~v~~l---~~g~ 146 (356)
T 2w18_A 78 KLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLL--------KSGNIKAVLGL---TKRR 146 (356)
T ss_dssp EEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEE--------EEEEEEEEEEE---TTTE
T ss_pred eeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEE--------eCCCeEEEEec---CCCc
Confidence 4567888888888888888532 22222 22222221111 12344444443 4555
Q ss_pred EEEEEe--CCCcEEEEeCC-CCeEEEEEecCCcceEEEEEec---CCCEEEEEeCCCcEEEEEcCCCeEEEEeecCC---
Q psy226 162 LLVSCS--ADMSLKLWDMS-TYQCLKTMQGHDHNVTGVAFLP---NSDFVLSASRDKTIKMWEVATGYCVKTLTGHR--- 232 (406)
Q Consensus 162 ~l~sgs--~d~~i~vwd~~-~~~~~~~~~~h~~~v~~~~~~p---~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~--- 232 (406)
++.+++ .|+.|++|++. +++.+..+.+|...+..++|+| ++.+|++|+.|++|+|||+.+|++++++.+|.
T Consensus 147 lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v 226 (356)
T 2w18_A 147 LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQ 226 (356)
T ss_dssp EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---
T ss_pred EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcce
Confidence 555543 59999999994 5888888999999999999999 77899999999999999999999999998754
Q ss_pred ccEEEEEECCCCCEE------------EEEeCCCeEEEEeCCCccceeEE-----ecCCceEEEEEeCCCCCcccccccc
Q psy226 233 EWVRQIKVSPDGTLL------------ASCSNDHTARVWSLATKETKAEL-----RGHDHTVECVAWAPGVASESISEAA 295 (406)
Q Consensus 233 ~~v~~l~~~~~~~~l------------~s~~~d~~v~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~ 295 (406)
..+.+++|+|+|.++ ++|+.|++|++||..++..+..+ .+|...+.+..+
T Consensus 227 ~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~------------- 293 (356)
T 2w18_A 227 ASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV------------- 293 (356)
T ss_dssp CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE-------------
T ss_pred eeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc-------------
Confidence 357778999999876 66889999999999888765443 133332222111
Q ss_pred CCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEE-EEEEcCCCCEEEEEeCCCeEEEEeC
Q psy226 296 GRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR-GVTFHPGGKYLVSCGDDKTLRVWDT 363 (406)
Q Consensus 296 ~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~-~l~~s~~g~~l~sgs~d~~i~vwd~ 363 (406)
.+.++++|+.|++|+|||+.+++++.++.+|...+. .++|+|+|++|++|+.|++|+|||+
T Consensus 294 -------sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 294 -------KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -------ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred -------CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 245799999999999999999999999999987655 6899999999999999999999985
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=9.8e-31 Score=249.27 Aligned_cols=279 Identities=12% Similarity=0.116 Sum_probs=225.6
Q ss_pred CCCCeEEEE---EcCCCCEEEEE--------------eCCC--cEEEEEcCCC--cEEEEecccccCeeeEEECCCCCEE
Q psy226 105 HRSPVIKVI---FHPVFSLMASC--------------SEDA--TIRLWDYETG--EYERALHGHLDSVQDIAFDQSGKLL 163 (406)
Q Consensus 105 h~~~V~~v~---~~p~~~~latg--------------s~dg--~v~vwd~~~~--~~~~~~~~h~~~V~~l~~~~~g~~l 163 (406)
....+..++ |+|++..++.. +.++ .|..||..++ +....+..+ ..+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 445567777 78877665543 3334 4444555445 344445444 456699999977788
Q ss_pred EEEeCCCcEEEEeCCCCeEEE-----EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEE
Q psy226 164 VSCSADMSLKLWDMSTYQCLK-----TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238 (406)
Q Consensus 164 ~sgs~d~~i~vwd~~~~~~~~-----~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l 238 (406)
++++.|+.|++||+.+++... .+.+|...|.+++|+|++.++++++.|+.|++||+.++..+..+..|...+.++
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~ 217 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKIL 217 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEE
Confidence 888889999999999988876 345788899999999999999999999999999999999999999999999999
Q ss_pred EECCCCCEEE-EEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe------
Q psy226 239 KVSPDGTLLA-SCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS------ 311 (406)
Q Consensus 239 ~~~~~~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~------ 311 (406)
+|+|+++.++ +++.|+.|++||+.+++....+..+ ..+.+++|+| ++.++++++
T Consensus 218 ~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~------------------~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 218 LYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSK------------------DGKELYIAQFSASNQ 278 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECT------------------TSSEEEEEEEESCTT
T ss_pred EEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcC------------------CCCEEEEEECCCCcc
Confidence 9999999885 5558999999999988777666554 4588999988 366787777
Q ss_pred --CCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCC
Q psy226 312 --RDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYL-VSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388 (406)
Q Consensus 312 --~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l-~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~ 388 (406)
.|+.|++||+.+++.+..+ .|...+.+++|+|+++++ ++++.|+.|++||+.+++.+..+. +...+.+++|+|++
T Consensus 279 ~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg 356 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDG 356 (433)
T ss_dssp CSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTS
T ss_pred ccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCC
Confidence 5889999999998877655 456689999999999755 667899999999999888887776 56679999999999
Q ss_pred CEEEEeeC---------------CCeEEEeec
Q psy226 389 PYVVTGSV---------------DKTVKVWEC 405 (406)
Q Consensus 389 ~~l~sgs~---------------Dg~v~iw~~ 405 (406)
++|++++. ||.|++||.
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred CEEEEEecCCCccccccccccccceEEEEEEC
Confidence 99888776 579999996
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.98 E-value=1.2e-30 Score=247.66 Aligned_cols=276 Identities=13% Similarity=0.126 Sum_probs=223.2
Q ss_pred CCCeEEEEEcCCCC-EEEEEe----CCC----cEEEEEc--CCCcEE--EEecccccCeeeEEECC--------------
Q psy226 106 RSPVIKVIFHPVFS-LMASCS----EDA----TIRLWDY--ETGEYE--RALHGHLDSVQDIAFDQ-------------- 158 (406)
Q Consensus 106 ~~~V~~v~~~p~~~-~latgs----~dg----~v~vwd~--~~~~~~--~~~~~h~~~V~~l~~~~-------------- 158 (406)
..+|...+|.+.+. ++++|+ .|| +|++||+ .+++.+ ..+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 34677778888875 666876 567 8999999 888866 55888988888877764
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCC---cEEEEEcCCCeEEEEee
Q psy226 159 SGKLLVSCSAD------MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK---TIKMWEVATGYCVKTLT 229 (406)
Q Consensus 159 ~g~~l~sgs~d------~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~ 229 (406)
.+..++.++.+ +.|++||+.. .....+.+|...+.+++|+|+|+.|++++.|+ .|++||+.++... .+.
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 25667666654 7999999975 44677888999999999999999999999885 9999999998775 567
Q ss_pred cCCccEEEEEECCCCCEEE-EEeCCCe--EEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCE
Q psy226 230 GHREWVRQIKVSPDGTLLA-SCSNDHT--ARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPY 306 (406)
Q Consensus 230 ~~~~~v~~l~~~~~~~~l~-s~~~d~~--v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (406)
.|...+.+++|+|||+.|+ +++.|+. |++||+.+++. ..+..|...+.++.|+| +|.+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp------------------dg~~ 280 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFP------------------DSQN 280 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECT------------------TSSE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECC------------------CCCE
Confidence 7888999999999999887 6666655 99999987664 56777888899999998 4677
Q ss_pred EEEEeC-CC--cEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCC---CeEEEEeCCCCccceeeccccceEE
Q psy226 307 LATGSR-DK--TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDD---KTLRVWDTANKRNMKTLEAHSHFVT 380 (406)
Q Consensus 307 l~s~~~-d~--~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d---~~i~vwd~~~~~~~~~l~~h~~~v~ 380 (406)
|++++. ++ .|.+||+.+++. ..+..|...+.+++|+|+|++|++++.+ ..|++||+.+++. ..+..+. .+.
T Consensus 281 l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~ 357 (415)
T 2hqs_A 281 LAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDE 357 (415)
T ss_dssp EEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCE
T ss_pred EEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcC
Confidence 887776 44 688889988764 4555677789999999999999988764 6899999998776 4555554 789
Q ss_pred EEEEeCCCCEEEEeeCCC---eEEEeec
Q psy226 381 SLDFHRAHPYVVTGSVDK---TVKVWEC 405 (406)
Q Consensus 381 ~l~~~~~~~~l~sgs~Dg---~v~iw~~ 405 (406)
+++|+|++++|++++.|+ .|.+||+
T Consensus 358 ~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 358 TPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred CeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 999999999999988887 7999985
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.98 E-value=2.2e-29 Score=246.29 Aligned_cols=278 Identities=12% Similarity=0.094 Sum_probs=225.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEc--CCCcEEEEecccccCeeeEEECC----CCCEEEEEeC-CCcEEEEeCCCCe
Q psy226 109 VIKVIFHPVFSLMASCSEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQ----SGKLLVSCSA-DMSLKLWDMSTYQ 181 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~dg~v~vwd~--~~~~~~~~~~~h~~~V~~l~~~~----~g~~l~sgs~-d~~i~vwd~~~~~ 181 (406)
+..++|+|++++|++++.|++|++||+ .+++....+. +...+..++|+| +|++|++++. +++|.+||..+++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 889999999999999999999999999 8888888877 445679999999 9999999884 8999999999999
Q ss_pred EEEEEecC-----------CcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEE--EeecCCccEEEEEECCCCCEE
Q psy226 182 CLKTMQGH-----------DHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVK--TLTGHREWVRQIKVSPDGTLL 247 (406)
Q Consensus 182 ~~~~~~~h-----------~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~--~~~~~~~~v~~l~~~~~~~~l 247 (406)
+++.+..+ ...+.++.++|++. ++++...+++|.+||..++..+. .+ .+...+..+.|+|+|+++
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l 338 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYF 338 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEE
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEE
Confidence 98887652 23688999999776 45667788999999998765433 33 356778899999999987
Q ss_pred EEEe-CCCeEEEEeCCCccceeEEec----CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEEEEEC
Q psy226 248 ASCS-NDHTARVWSLATKETKAELRG----HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIKLWDV 321 (406)
Q Consensus 248 ~s~~-~d~~v~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~lwd~ 321 (406)
++++ .+++|.+||+.+++....+.. |......+ +.|+ .+.++++++ .|++|.+||+
T Consensus 339 ~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~-----------------~g~~~~s~~~~d~~V~v~d~ 400 (543)
T 1nir_A 339 MTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPK-----------------YGPVWSTSHLGDGSISLIGT 400 (543)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETT-----------------TEEEEEEEBSSSSEEEEEEC
T ss_pred EEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCC-----------------CccEEEeccCCCceEEEEEe
Confidence 6554 689999999999887776653 33222222 2331 356677776 6899999999
Q ss_pred CC-------CeEEEEEeCCCcCEEEEEEcCCCCEEEEEe-------CCCeEEEEeCCCCccc-eee--------ccccce
Q psy226 322 GS-------GSLLFTLIGHDNWVRGVTFHPGGKYLVSCG-------DDKTLRVWDTANKRNM-KTL--------EAHSHF 378 (406)
Q Consensus 322 ~~-------~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs-------~d~~i~vwd~~~~~~~-~~l--------~~h~~~ 378 (406)
.+ .+++.++.+|...+..++|+|+|++|++++ .+++|.|||+.+++.. ..+ ..+...
T Consensus 401 ~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~ 480 (543)
T 1nir_A 401 DPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKR 480 (543)
T ss_dssp CTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCE
T ss_pred CCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCc
Confidence 88 899999999998889999999999999987 2779999999998876 443 345678
Q ss_pred EEEEEEeCCCCEEEEee-----CCCeEEEeecC
Q psy226 379 VTSLDFHRAHPYVVTGS-----VDKTVKVWECR 406 (406)
Q Consensus 379 v~~l~~~~~~~~l~sgs-----~Dg~v~iw~~~ 406 (406)
+..++|+|+|+.|+++. .|+.|.|||.+
T Consensus 481 ~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 481 VVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp EEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred eEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 99999999999988653 47999999953
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=1.8e-29 Score=246.84 Aligned_cols=272 Identities=11% Similarity=0.146 Sum_probs=223.8
Q ss_pred EEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC--CCCeEEEEEecCC
Q psy226 113 IFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM--STYQCLKTMQGHD 190 (406)
Q Consensus 113 ~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~--~~~~~~~~~~~h~ 190 (406)
+|+|++.++++++.|++|.+||..+++...++..+.. +.+++|+|+|++|++++.|++|++||+ .+++++.++.. .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 4899999999999999999999999999988873333 889999999999999999999999999 88888888874 4
Q ss_pred cceEEEEEec----CCCEEEEEe-CCCcEEEEEcCCCeEEEEeecC----------Cc-cEEEEEECCCCC-EEEEEeCC
Q psy226 191 HNVTGVAFLP----NSDFVLSAS-RDKTIKMWEVATGYCVKTLTGH----------RE-WVRQIKVSPDGT-LLASCSND 253 (406)
Q Consensus 191 ~~v~~~~~~p----~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~----------~~-~v~~l~~~~~~~-~l~s~~~d 253 (406)
..+..++|+| +|+++++++ .+++|.+||..++++++.+..+ .. .+..+.++|++. ++++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 5679999999 999999887 4899999999999998887652 23 688999999765 45677789
Q ss_pred CeEEEEeCCCcccee--EEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEE-eCCCcEEEEECCCCeEEEEE
Q psy226 254 HTARVWSLATKETKA--ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATG-SRDKTIKLWDVGSGSLLFTL 330 (406)
Q Consensus 254 ~~v~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~lwd~~~~~~~~~~ 330 (406)
+.|.+||+.+..... .+ .+...+..+.|+| ++.+++++ ..+++|.+||+.+++++..+
T Consensus 302 g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~sp------------------dg~~l~va~~~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDS------------------SHRYFMTAANNSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp TEEEEEECTTSSSCEEEEE-ECCSSCCCEEECT------------------TSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred CeEEEEEecCCCcceeEEe-ccCcCccCceECC------------------CCCEEEEEecCCCeEEEEECCCCeEEEee
Confidence 999999998765433 22 3445566777877 46666554 56899999999999998887
Q ss_pred eC----CCcCEEEEEEcCC-CCEEEEEe-CCCeEEEEeCCC-------CccceeeccccceEEEEEEeCCCCEEEEee--
Q psy226 331 IG----HDNWVRGVTFHPG-GKYLVSCG-DDKTLRVWDTAN-------KRNMKTLEAHSHFVTSLDFHRAHPYVVTGS-- 395 (406)
Q Consensus 331 ~~----h~~~v~~l~~s~~-g~~l~sgs-~d~~i~vwd~~~-------~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs-- 395 (406)
.. |......+ ++|+ |..+++++ .|++|.|||+.+ .++++++..|...+..++|||++++|++++
T Consensus 363 ~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 363 DVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp ECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTT
T ss_pred ccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCC
Confidence 64 65444444 4777 66677775 689999999988 788999999988888999999999999987
Q ss_pred -----CCCeEEEeecC
Q psy226 396 -----VDKTVKVWECR 406 (406)
Q Consensus 396 -----~Dg~v~iw~~~ 406 (406)
.+++|.+||..
T Consensus 442 ~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 442 NPDARISQSVAVFDLK 457 (543)
T ss_dssp CSSHHHHTCEEEEETT
T ss_pred CCCcccCceEEEEECC
Confidence 37899999963
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=2.1e-29 Score=238.94 Aligned_cols=264 Identities=14% Similarity=0.130 Sum_probs=215.3
Q ss_pred EeccCCCCeEEEEEcC--------------CCCEEEEEeCC------CcEEEEEcCCCcEEEEecccccCeeeEEECCCC
Q psy226 101 ALSGHRSPVIKVIFHP--------------VFSLMASCSED------ATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p--------------~~~~latgs~d------g~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g 160 (406)
.+.+|...+..+++++ .+..++.++.+ ++|++||..++ ....+.+|...|.+++|+|+|
T Consensus 112 ~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg 190 (415)
T 2hqs_A 112 SYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDG 190 (415)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTS
T ss_pred EEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCC
Confidence 4677877777777765 25666666654 79999999754 456777899999999999999
Q ss_pred CEEEEEeCCC---cEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEE-EEeCCCc--EEEEEcCCCeEEEEeecCCcc
Q psy226 161 KLLVSCSADM---SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDKT--IKMWEVATGYCVKTLTGHREW 234 (406)
Q Consensus 161 ~~l~sgs~d~---~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~--i~iwd~~~~~~~~~~~~~~~~ 234 (406)
++|++++.|+ .|++||+.++++. .+..|...+.+++|+|+|+.|+ +++.|+. |++||+.++.. ..+..|...
T Consensus 191 ~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~ 268 (415)
T 2hqs_A 191 SKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSN 268 (415)
T ss_dssp SEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSC
T ss_pred CEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCc
Confidence 9999999885 9999999988765 5677888999999999999877 6666665 99999998875 567788889
Q ss_pred EEEEEECCCCCEEEEEeC-CC--eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe
Q psy226 235 VRQIKVSPDGTLLASCSN-DH--TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS 311 (406)
Q Consensus 235 v~~l~~~~~~~~l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 311 (406)
+.+++|+|+|+.|++++. ++ .|.+||+.++.. ..+..+...+.+++|+| +|.+|++++
T Consensus 269 ~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~sp------------------dG~~l~~~~ 329 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSS------------------DGKFMVMVS 329 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECT------------------TSSEEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECC------------------CCCEEEEEE
Confidence 999999999999988886 44 677789877653 44556777888999998 477788877
Q ss_pred CC---CcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCC---eEEEEeCCCCccceeeccccceEEEEEEe
Q psy226 312 RD---KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK---TLRVWDTANKRNMKTLEAHSHFVTSLDFH 385 (406)
Q Consensus 312 ~d---~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~---~i~vwd~~~~~~~~~l~~h~~~v~~l~~~ 385 (406)
.+ ..|++||+.+++.. .+..|. .+.+++|+|+|++|++++.++ .|++||+. +.....+..|.+.|.+++|+
T Consensus 330 ~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 330 SNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWS 406 (415)
T ss_dssp ECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEEC
T ss_pred CcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccc
Confidence 64 58999999988774 555554 899999999999999888777 89999986 55677888899999999999
Q ss_pred CCCC
Q psy226 386 RAHP 389 (406)
Q Consensus 386 ~~~~ 389 (406)
|...
T Consensus 407 ~~~~ 410 (415)
T 2hqs_A 407 PYLH 410 (415)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9754
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=4.8e-29 Score=253.84 Aligned_cols=278 Identities=13% Similarity=0.131 Sum_probs=222.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CC-----cEEEEEcCCCcEEEEeccccc------------------------CeeeEE
Q psy226 106 RSPVIKVIFHPVFSLMASCSE-DA-----TIRLWDYETGEYERALHGHLD------------------------SVQDIA 155 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~-dg-----~v~vwd~~~~~~~~~~~~h~~------------------------~V~~l~ 155 (406)
...|.+++|+|+|++|++++. |+ +|++||+.+++....+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 899999999988777765543 389999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCe--EEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCc
Q psy226 156 FDQSGKLLVSCSADMSLKLWDMSTYQ--CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233 (406)
Q Consensus 156 ~~~~g~~l~sgs~d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~ 233 (406)
|+|||++|++++. +.|.+||+.++. ....+..|...+.+++|+|+|++|+.++ ++.|++||+.++........+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999886 899999998872 3445667888899999999999999887 46899999998876655444433
Q ss_pred c----------------EEEEEECCCCCEEEEEeCCC---------------------------------eEEEEeCCC-
Q psy226 234 W----------------VRQIKVSPDGTLLASCSNDH---------------------------------TARVWSLAT- 263 (406)
Q Consensus 234 ~----------------v~~l~~~~~~~~l~s~~~d~---------------------------------~v~vwd~~~- 263 (406)
. +..++|+|||++|++++.|+ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 37799999999999988776 889999987
Q ss_pred ccceeEEe--cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC-----CCcEEEEECCCCeEEEEEeCCCc-
Q psy226 264 KETKAELR--GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR-----DKTIKLWDVGSGSLLFTLIGHDN- 335 (406)
Q Consensus 264 ~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-----d~~i~lwd~~~~~~~~~~~~h~~- 335 (406)
++...... .|...+..++| |+ |.+|++++. +..|++||+.+++....+..+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pD------------------g~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 334 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RD------------------PQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT 334 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EE------------------TTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS
T ss_pred CceEEecCCCCcceEEEEEEe-CC------------------CCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC
Confidence 76544332 47788999999 94 667776553 56799999999988776665543
Q ss_pred ---CEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCccceeeccccceEEEE-EEeCCCCEEE-EeeCCC--eEEEeec
Q psy226 336 ---WVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSL-DFHRAHPYVV-TGSVDK--TVKVWEC 405 (406)
Q Consensus 336 ---~v~~l~~s~~g~~l~sgs~d~~i~vwd~~-~~~~~~~l~~h~~~v~~l-~~~~~~~~l~-sgs~Dg--~v~iw~~ 405 (406)
.+..++|+|+|+++++++.||.++||.+. ++. ...+..|...|..+ +|+|+++.|+ +++.|+ .++||++
T Consensus 335 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 335 WVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp CCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred cCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 34689999999999999999988888765 344 67777777778887 5999998775 555555 8999975
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.96 E-value=3.1e-27 Score=216.87 Aligned_cols=273 Identities=12% Similarity=0.137 Sum_probs=204.8
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeC-CCcEEEEeCCCCeE-EEEEecC
Q psy226 113 IFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSA-DMSLKLWDMSTYQC-LKTMQGH 189 (406)
Q Consensus 113 ~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~-d~~i~vwd~~~~~~-~~~~~~h 189 (406)
.|.+++. .+++++.++.|++||..+++....+..+...+ +++|+|+|+++++++. ++.|.+||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 4555554 57788899999999999999888877766677 9999999997776665 88999999998887 7777777
Q ss_pred CcceEEEEEecCCCEEEEEeCCC---cEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE-EEEeCCCe-EEEEeCCCc
Q psy226 190 DHNVTGVAFLPNSDFVLSASRDK---TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL-ASCSNDHT-ARVWSLATK 264 (406)
Q Consensus 190 ~~~v~~~~~~p~~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~d~~-v~vwd~~~~ 264 (406)
..+..+++|+|++++++++..++ .|.+||+.++..+..+..+. ....++|+|+|+++ +++..++. +.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 77666699999999998655553 89999999998888776544 46899999999855 45566688 999998754
Q ss_pred ccee----EEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEE-EEEeCCCcEEEEECCCCeE---EEEEeCCCcC
Q psy226 265 ETKA----ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYL-ATGSRDKTIKLWDVGSGSL---LFTLIGHDNW 336 (406)
Q Consensus 265 ~~~~----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~lwd~~~~~~---~~~~~~h~~~ 336 (406)
.... ...........++|+| +|.++ +++..++.|++||+.+++. +..+..+ ..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~sp------------------dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~ 222 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTP------------------DGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NL 222 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECT------------------TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SC
T ss_pred CcEeecCCccccCCCCccceEECC------------------CCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CC
Confidence 3321 1123334567888887 35544 5555689999999998887 7666644 56
Q ss_pred EEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcc--ceeeccc----cc---eEEEEEEeCCCCEEEE-eeCCCeEEEeec
Q psy226 337 VRGVTFHPGGKYLVSCG-DDKTLRVWDTANKRN--MKTLEAH----SH---FVTSLDFHRAHPYVVT-GSVDKTVKVWEC 405 (406)
Q Consensus 337 v~~l~~s~~g~~l~sgs-~d~~i~vwd~~~~~~--~~~l~~h----~~---~v~~l~~~~~~~~l~s-gs~Dg~v~iw~~ 405 (406)
+..++|+|+|++|+.++ .++.|.+||..+++. +..+..+ .. ....++|+|++++|++ +..++.|.+||+
T Consensus 223 ~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 302 (331)
T 3u4y_A 223 PGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTI 302 (331)
T ss_dssp CCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEe
Confidence 78999999999776554 578899999988766 3333221 11 2356899999998855 455679999996
Q ss_pred C
Q psy226 406 R 406 (406)
Q Consensus 406 ~ 406 (406)
.
T Consensus 303 ~ 303 (331)
T 3u4y_A 303 S 303 (331)
T ss_dssp T
T ss_pred c
Confidence 3
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=2.1e-26 Score=212.87 Aligned_cols=271 Identities=10% Similarity=0.072 Sum_probs=218.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-------CCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEE-EeCCCcEEEEe
Q psy226 105 HRSPVIKVIFHPVFSLMASCSE-------DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVS-CSADMSLKLWD 176 (406)
Q Consensus 105 h~~~V~~v~~~p~~~~latgs~-------dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~s-gs~d~~i~vwd 176 (406)
....+..++|+|+++.+++++. ++.|.+||..+++....+.. ...+.+++|+|+|++++. +..++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 4456889999999998888774 56899999999998877764 345789999999996554 45579999999
Q ss_pred CCCCeEEEEEecCCcc---------eEEEEEecCCCEEEEEe--CCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCC
Q psy226 177 MSTYQCLKTMQGHDHN---------VTGVAFLPNSDFVLSAS--RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT 245 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~---------v~~~~~~p~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~ 245 (406)
..+++.+..+..+... +.+++|+|+++++++++ .++.|.+||..++..+..+..+...+..++|+|+|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCC
Confidence 9999988877765422 68899999999877765 478999999999998888876666688899999999
Q ss_pred EEEEEeCCCeEEEEeCCCccceeEEec----CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEEEEE
Q psy226 246 LLASCSNDHTARVWSLATKETKAELRG----HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIKLWD 320 (406)
Q Consensus 246 ~l~s~~~d~~v~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~lwd 320 (406)
++++++.++.+.+||+.+.+....+.. +...+..++|+|+ +.++++++ .++.|.+||
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d------------------g~~l~~~~~~~~~v~~~d 259 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA------------------RQRAFITDSKAAEVLVVD 259 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT------------------TTEEEEEESSSSEEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC------------------CCEEEEEeCCCCEEEEEE
Confidence 999999999999999998877766653 4556778888883 55555554 458999999
Q ss_pred CCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCC
Q psy226 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG-DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397 (406)
Q Consensus 321 ~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs-~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~D 397 (406)
+.+++.+..+..... ..++|+|+|++++.++ .++.|.+||..+++.+..+... ..+.+++|+|++++|+.+..+
T Consensus 260 ~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 260 TRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp TTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 999998877765432 5699999999766555 7899999999999888877654 368999999999977665544
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=3e-28 Score=247.26 Aligned_cols=277 Identities=14% Similarity=0.151 Sum_probs=211.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEeccccc---CeeeEEECCCCCEEEEEeCC---------CcEEEE
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD---SVQDIAFDQSGKLLVSCSAD---------MSLKLW 175 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~---~V~~l~~~~~g~~l~sgs~d---------~~i~vw 175 (406)
.+.+++|+|+++++++ +.||+|++||..+++....+.+|.. .|.+++|+|||++|++++.+ +.+.+|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3567899999998877 7899999999999988888877765 49999999999999999875 778899
Q ss_pred eCCCCeEEEEEe---cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccE-----------------
Q psy226 176 DMSTYQCLKTMQ---GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV----------------- 235 (406)
Q Consensus 176 d~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v----------------- 235 (406)
|+.+++. ..+. +|...+..++|+|+|+.|+.++. +.|++||+.++........+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 9998875 3333 34445889999999999999876 799999999988766655544333
Q ss_pred -EEEEECCCCCEEEEEeCCC----------------------------------eEEEEeCCCccceeEEecC------C
Q psy226 236 -RQIKVSPDGTLLASCSNDH----------------------------------TARVWSLATKETKAELRGH------D 274 (406)
Q Consensus 236 -~~l~~~~~~~~l~s~~~d~----------------------------------~v~vwd~~~~~~~~~~~~~------~ 274 (406)
..++|+|||+.|++++.|+ .|++||+.+++....+..+ .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 7899999999999987653 7999999887755555544 6
Q ss_pred ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC----CCcEEEEECCCCeEEEEEeC-CCcCEE----EEEEcCC
Q psy226 275 HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR----DKTIKLWDVGSGSLLFTLIG-HDNWVR----GVTFHPG 345 (406)
Q Consensus 275 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~lwd~~~~~~~~~~~~-h~~~v~----~l~~s~~ 345 (406)
..+..++|+|+ |.++++.+. +..|++||+.++++...+.. +..++. .++|+|+
T Consensus 255 ~~~~~~~~SpD------------------g~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spd 316 (723)
T 1xfd_A 255 YYITMVKWATS------------------TKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKD 316 (723)
T ss_dssp EEEEEEEESSS------------------SEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTT
T ss_pred ceeEEEEEeCC------------------CeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCC
Confidence 77889999984 666766543 35799999999987665543 445543 7899999
Q ss_pred CCEEEE--EeCCC------eEEEEe-CCCCc--cceeeccccceEE-EEEEeCCCCEEEEeeCC---CeEEEeec
Q psy226 346 GKYLVS--CGDDK------TLRVWD-TANKR--NMKTLEAHSHFVT-SLDFHRAHPYVVTGSVD---KTVKVWEC 405 (406)
Q Consensus 346 g~~l~s--gs~d~------~i~vwd-~~~~~--~~~~l~~h~~~v~-~l~~~~~~~~l~sgs~D---g~v~iw~~ 405 (406)
|+.|+. +..++ .|++|| ..++. +...+..+...+. .++|+|+++.|+..+.+ +.++||++
T Consensus 317 g~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 317 GRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp SCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred CCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 997764 45677 577788 34443 1455553333344 47999999999766555 78999985
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=7.5e-28 Score=216.33 Aligned_cols=254 Identities=14% Similarity=0.126 Sum_probs=200.2
Q ss_pred EEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEecC-CcceEEEEEec
Q psy226 123 SCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST-YQCLKTMQGH-DHNVTGVAFLP 200 (406)
Q Consensus 123 tgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~-~~~~~~~~~h-~~~v~~~~~~p 200 (406)
+++.|++|++||..+++.. .+..|...|.+++|+|+|++|++++ ++.|.+||+.+ ++......++ ...+.+++|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 4578999999999998865 4556889999999999999999986 78999999998 8776666565 36788999999
Q ss_pred CCCEEEEEe--CCCcEEEEEc--CCCeEEEEeecCCccEEEEEECCCCCEEE-EEeCCCeEEEEeCCC-ccceeEEecCC
Q psy226 201 NSDFVLSAS--RDKTIKMWEV--ATGYCVKTLTGHREWVRQIKVSPDGTLLA-SCSNDHTARVWSLAT-KETKAELRGHD 274 (406)
Q Consensus 201 ~~~~l~s~s--~d~~i~iwd~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~v~vwd~~~-~~~~~~~~~~~ 274 (406)
++++|++++ .++...+|.+ .++. ...+..+. .+..++|+|+++.++ +++.|+.+++|++.. ......+..+.
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 172 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGE 172 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSS
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCC
Confidence 999999988 3345555554 4444 34444443 488899999999887 788899999998643 23345566777
Q ss_pred ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEEEEECC-CCeEEEEEeCCCcCEEEEEEcCCCCEEEEE
Q psy226 275 HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIKLWDVG-SGSLLFTLIGHDNWVRGVTFHPGGKYLVSC 352 (406)
Q Consensus 275 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~lwd~~-~~~~~~~~~~h~~~v~~l~~s~~g~~l~sg 352 (406)
..+.++.|+|+ +.+++.++ .++.+++|++. .+..+..+..|...+..++|+|+|++|+++
T Consensus 173 ~~~~~~~~s~d------------------g~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 234 (297)
T 2ojh_A 173 GRNDGPDYSPD------------------GRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFV 234 (297)
T ss_dssp SCEEEEEECTT------------------SSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEE
T ss_pred CccccceECCC------------------CCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEE
Confidence 88999999983 56666655 58999999886 556667788888889999999999999888
Q ss_pred eCC-----------CeEEEEeCCCCcc--ceeeccccceEEEEEEeCCCCEEEEeeCCC
Q psy226 353 GDD-----------KTLRVWDTANKRN--MKTLEAHSHFVTSLDFHRAHPYVVTGSVDK 398 (406)
Q Consensus 353 s~d-----------~~i~vwd~~~~~~--~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg 398 (406)
+.+ +.|++||+.+++. +..+..|...+.+++|+|++++|++++.|.
T Consensus 235 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 235 SYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 765 5799999988765 334446777899999999999998887664
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1e-26 Score=213.94 Aligned_cols=265 Identities=12% Similarity=0.245 Sum_probs=193.1
Q ss_pred EEEEEeCCCcEEEEEcC-CCcEE-EEecccccCeeeEEECCCCCEEEEEeCC-CcEEEEeCC--CCe--EEEEEecCCcc
Q psy226 120 LMASCSEDATIRLWDYE-TGEYE-RALHGHLDSVQDIAFDQSGKLLVSCSAD-MSLKLWDMS--TYQ--CLKTMQGHDHN 192 (406)
Q Consensus 120 ~latgs~dg~v~vwd~~-~~~~~-~~~~~h~~~V~~l~~~~~g~~l~sgs~d-~~i~vwd~~--~~~--~~~~~~~h~~~ 192 (406)
++++++.|+.|++||+. ++... .....|...+.+++|+|+|++|++++.+ +.|.+|++. +++ .+..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 45555889999999985 44322 2223477789999999999999988886 999999987 444 344555444 7
Q ss_pred eEEEEEecCCCEEEEEeC-CCcEEEEEc---CCCeEEEEeecCCccEEEEEECCCCCEEEEEe-CCCeEEEEeCCC-ccc
Q psy226 193 VTGVAFLPNSDFVLSASR-DKTIKMWEV---ATGYCVKTLTGHREWVRQIKVSPDGTLLASCS-NDHTARVWSLAT-KET 266 (406)
Q Consensus 193 v~~~~~~p~~~~l~s~s~-d~~i~iwd~---~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~v~vwd~~~-~~~ 266 (406)
+..++|+|++++|++++. ++.|.+||+ .++.....+..+ ..+.+++|+|+|+++++++ .++.|++||+.+ +..
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 889999999998876665 889999999 444455555444 3588899999999888877 899999999987 433
Q ss_pred ee----EEec-CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEE-EEeCCCcEEEEECCC--CeE--EEEEe----C
Q psy226 267 KA----ELRG-HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA-TGSRDKTIKLWDVGS--GSL--LFTLI----G 332 (406)
Q Consensus 267 ~~----~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~lwd~~~--~~~--~~~~~----~ 332 (406)
.. .+.. ....+..++|+|+ +.+++ ++..++.|++||+.. +.. ...+. +
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pd------------------g~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPN------------------EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTT------------------SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred eeecccccccCCCCCcceEEECCC------------------CCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 21 2222 2346778888873 55554 445889999999953 432 22222 1
Q ss_pred C--CcCEEEEEEcCCCCEEE-EEeCCCeEEEEeCC--C--CccceeeccccceEEEEEEeCCCCEEEEee-CCCeEEEee
Q psy226 333 H--DNWVRGVTFHPGGKYLV-SCGDDKTLRVWDTA--N--KRNMKTLEAHSHFVTSLDFHRAHPYVVTGS-VDKTVKVWE 404 (406)
Q Consensus 333 h--~~~v~~l~~s~~g~~l~-sgs~d~~i~vwd~~--~--~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs-~Dg~v~iw~ 404 (406)
+ ...+..++|+|+|++|+ +++.++.|++||+. + .+.+..+..+.. +.+++|+|++++|++++ .|+.|.+|+
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~ 305 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYE 305 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEE
T ss_pred ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEE
Confidence 1 34677899999999887 45579999999997 2 344455555544 88999999999888777 689999995
Q ss_pred c
Q psy226 405 C 405 (406)
Q Consensus 405 ~ 405 (406)
+
T Consensus 306 ~ 306 (343)
T 1ri6_A 306 I 306 (343)
T ss_dssp E
T ss_pred E
Confidence 4
No 137
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=2.1e-26 Score=211.26 Aligned_cols=274 Identities=12% Similarity=0.108 Sum_probs=202.1
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEecccc-c-CeeeEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEEEEecC-----C
Q psy226 119 SLMASCSEDATIRLWDYETGEYERALHGHL-D-SVQDIAFDQSGKLL-VSCSADMSLKLWDMSTYQCLKTMQGH-----D 190 (406)
Q Consensus 119 ~~latgs~dg~v~vwd~~~~~~~~~~~~h~-~-~V~~l~~~~~g~~l-~sgs~d~~i~vwd~~~~~~~~~~~~h-----~ 190 (406)
.++++++.+++|++||..+++....+.... . .+.+++|+|+|+.+ ++++.++.|.+||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 478999999999999999998887776332 2 58899999999866 45556789999999998887766532 1
Q ss_pred cceEEEEEecCCCEEEEEe------------CCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Q psy226 191 HNVTGVAFLPNSDFVLSAS------------RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258 (406)
Q Consensus 191 ~~v~~~~~~p~~~~l~s~s------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~v 258 (406)
..+.+++|+|+++++++++ .++.|.+||+.++..+..+.. ...+..++|+|+|++++++ ++.|++
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2567899999999988886 579999999999888777764 3457789999999988887 689999
Q ss_pred EeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCC---EEEEEeCCC----------cEEEEECCCCe
Q psy226 259 WSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGP---YLATGSRDK----------TIKLWDVGSGS 325 (406)
Q Consensus 259 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~s~~~d~----------~i~lwd~~~~~ 325 (406)
||+.+++....+..+... ..+.|+|+....... ....+. ....+..++ .|.+||+.+++
T Consensus 159 ~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQ-------HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp EETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCC-------CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred EECCCCcEeeeeeccccC-CCceeCCCccEEeee-------ccCCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 999887766555433210 011334321110000 000010 011111122 58999999987
Q ss_pred EE-EEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 326 LL-FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 326 ~~-~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
.. ..+..+...+.+++|+|+|++|+++ ++.|++||+.+++.+..+..+ ..+.+++|+|++++|++++.|+.|.+||
T Consensus 231 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 231 MAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred ceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 64 3344566778899999999999988 799999999998887777644 4578999999999999999999999999
Q ss_pred cC
Q psy226 405 CR 406 (406)
Q Consensus 405 ~~ 406 (406)
..
T Consensus 308 ~~ 309 (337)
T 1pby_B 308 AE 309 (337)
T ss_dssp TT
T ss_pred Cc
Confidence 63
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=3e-26 Score=232.03 Aligned_cols=278 Identities=14% Similarity=0.179 Sum_probs=209.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC-----C
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST-----Y 180 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~-----~ 180 (406)
..+|.+++|+|+ ..++.+. +++|++||+.+++... +..+...+.+++|+|+|++|+++ .|+.|++||+.+ +
T Consensus 81 ~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g 156 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMS 156 (706)
T ss_dssp -CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred ccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence 357999999999 6555553 5999999999887644 44567789999999999999985 689999999988 7
Q ss_pred eEEEEEecCCcc--------------eEEEEEecCCCEEEEEe---------------------------------CCCc
Q psy226 181 QCLKTMQGHDHN--------------VTGVAFLPNSDFVLSAS---------------------------------RDKT 213 (406)
Q Consensus 181 ~~~~~~~~h~~~--------------v~~~~~~p~~~~l~s~s---------------------------------~d~~ 213 (406)
+.......+... +.++.|+|||++|++++ .+..
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 765544444333 47899999999999987 4467
Q ss_pred EEEEEcCCCeEEEEee--cCCccEEEEEECCCCCEEEEEeCCC-----eEEEEeCCCccceeEEe-c-CCc---eEEEEE
Q psy226 214 IKMWEVATGYCVKTLT--GHREWVRQIKVSPDGTLLASCSNDH-----TARVWSLATKETKAELR-G-HDH---TVECVA 281 (406)
Q Consensus 214 i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~d~-----~v~vwd~~~~~~~~~~~-~-~~~---~v~~~~ 281 (406)
|.+||+.++....... .|...+..++|+|||+.|++++.++ .|++||+.++.....+. . +.. .+..+.
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce
Confidence 9999999887655442 4667899999999999999988776 89999998873333222 1 111 123455
Q ss_pred eCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECC-CCeEEEEEeCCCcCEEE-EEEcCCCCEEEEEe-CCC--
Q psy226 282 WAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG-SGSLLFTLIGHDNWVRG-VTFHPGGKYLVSCG-DDK-- 356 (406)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~-~~~~~~~~~~h~~~v~~-l~~s~~g~~l~sgs-~d~-- 356 (406)
|+|. .+|.++++++.|+.++||++. ++..+..+..|...+.. ++|+|+|+.|+.++ .++
T Consensus 317 ~sp~----------------~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 317 FLPG----------------SNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp ECTT----------------CSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred eecC----------------CCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence 6551 036689999999999999876 67777888888777877 79999999876554 444
Q ss_pred --eEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCC----CeEEEeec
Q psy226 357 --TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD----KTVKVWEC 405 (406)
Q Consensus 357 --~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~D----g~v~iw~~ 405 (406)
.|+.||..+++ ...+. |...+.+++|+|++++|+..+.+ +.|.+||.
T Consensus 381 ~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 381 ERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp CBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred eEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 67777877765 44444 56678999999999988876444 56999986
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=2.5e-26 Score=242.16 Aligned_cols=279 Identities=9% Similarity=0.062 Sum_probs=231.7
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~-~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
..+.+|...+.++.|+++ .++++++.||++.||.+.. +.....+..|. .+..++|+|+|+.|+.+ .++.|.+||+.
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~ 273 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPD 273 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTT
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCC
Confidence 345789999999999998 7778888999999998653 33345555554 46778999999999887 48999999995
Q ss_pred CCeEEEEEec-----------CCcceEEEEEe-cCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCc-cEEEEEECCCCC
Q psy226 179 TYQCLKTMQG-----------HDHNVTGVAFL-PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE-WVRQIKVSPDGT 245 (406)
Q Consensus 179 ~~~~~~~~~~-----------h~~~v~~~~~~-p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~~~ 245 (406)
..+ +..+.+ |...+.+++|+ |+|+.|++++ ++.|.+|++.++... .+..|.. .+..++|+ +|+
T Consensus 274 ~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~ 349 (1045)
T 1k32_A 274 TEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKV 349 (1045)
T ss_dssp TCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEE
T ss_pred ceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCC
Confidence 443 335544 34478999999 9999988887 789999999887644 4667777 89999999 999
Q ss_pred EEEEEeCCCeEE-EEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCC
Q psy226 246 LLASCSNDHTAR-VWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG 324 (406)
Q Consensus 246 ~l~s~~~d~~v~-vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~ 324 (406)
.++.++.++.+. +||+.+.... .+.+|...+..++|+| +|.+|++++.++.|++||+.++
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~Sp------------------DG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDR------------------NGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECT------------------TSSEEEEEETTSEEEEEETTTC
T ss_pred eEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECC------------------CCCEEEEECCCCeEEEEECCCC
Confidence 999999988888 9998876544 3447778899999998 4789999999999999999999
Q ss_pred eEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCC----------eEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEe
Q psy226 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK----------TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394 (406)
Q Consensus 325 ~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~----------~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sg 394 (406)
+......+|...+.+++|||||++|++++.++ .|++||+.+++ ...+..|...+.+++|+|+|++|+++
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEE
Confidence 98877778999999999999999998887654 99999999877 66777788889999999999999999
Q ss_pred eCCCeEEEeec
Q psy226 395 SVDKTVKVWEC 405 (406)
Q Consensus 395 s~Dg~v~iw~~ 405 (406)
+.++...+|+.
T Consensus 490 s~~~~~~~~~~ 500 (1045)
T 1k32_A 490 SYRSLDPSPDR 500 (1045)
T ss_dssp ESCCCCCEECS
T ss_pred ecccCCcCcch
Confidence 99888888763
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.95 E-value=3.2e-26 Score=233.09 Aligned_cols=275 Identities=12% Similarity=0.111 Sum_probs=212.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc--EEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGE--YERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKT 185 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~ 185 (406)
.|.+++|+||+++|++++. +.|++||+.++. ....+..|...+.+++|+|||++|+.++ ++.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 3889999999999999987 999999999882 3445667888899999999999999987 46899999998876654
Q ss_pred EecCCcc----------------eEEEEEecCCCEEEEEeCCC---------------------------------cEEE
Q psy226 186 MQGHDHN----------------VTGVAFLPNSDFVLSASRDK---------------------------------TIKM 216 (406)
Q Consensus 186 ~~~h~~~----------------v~~~~~~p~~~~l~s~s~d~---------------------------------~i~i 216 (406)
...+... +.+++|+|||++|++++.|+ .|.+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGV 267 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEE
Confidence 4444332 47799999999999988765 7899
Q ss_pred EEcCC-CeEEEEee--cCCccEEEEEECCCCCEEEEEeC-----CCeEEEEeCCCccceeEEecCCc----eEEEEEeCC
Q psy226 217 WEVAT-GYCVKTLT--GHREWVRQIKVSPDGTLLASCSN-----DHTARVWSLATKETKAELRGHDH----TVECVAWAP 284 (406)
Q Consensus 217 wd~~~-~~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~-----d~~v~vwd~~~~~~~~~~~~~~~----~v~~~~~~~ 284 (406)
||+.+ +....... .|...+..++| |||++|+.++. +..|++||+.+++....+..+.. .+..++|+|
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 99988 87655443 47788999999 99999987654 57899999998876665554432 334667776
Q ss_pred CCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECC-CCeEEEEEeCCCcCEEEE-EEcCCCCEEE-EEeCCC--eEE
Q psy226 285 GVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG-SGSLLFTLIGHDNWVRGV-TFHPGGKYLV-SCGDDK--TLR 359 (406)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~-~~~~~~~~~~h~~~v~~l-~~s~~g~~l~-sgs~d~--~i~ 359 (406)
+|.++++++.|+.++||.+. .+. ...+..|...|..+ .|+|+|+.|+ +++.++ .++
T Consensus 347 ------------------dg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 347 ------------------DGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp ------------------TSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred ------------------CCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 46688899999988888764 445 77788888888887 5999999775 455555 899
Q ss_pred EEeCCC-CccceeeccccceEEEEEEeCCCCEEEEeeCC----CeEEEeec
Q psy226 360 VWDTAN-KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD----KTVKVWEC 405 (406)
Q Consensus 360 vwd~~~-~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~D----g~v~iw~~ 405 (406)
||++.. +.....+.. ...+.+++|+|++++|+....+ +.+.+|+.
T Consensus 408 l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 408 IYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp EEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred EEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 999864 555666665 5568899999999988765433 35666653
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=5.8e-26 Score=224.87 Aligned_cols=267 Identities=10% Similarity=0.070 Sum_probs=204.3
Q ss_pred CCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeC---CCcEEEEeCCC---
Q psy226 107 SPVIKVIFHPVFSLMASCSE-DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSA---DMSLKLWDMST--- 179 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~-dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~---d~~i~vwd~~~--- 179 (406)
.+|++++|+|||+.||.++. ||+++||++.+++..+....+...|.+++|+|+ +++++++. +...++|.+..
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC
Confidence 47999999999999999887 999999999777654444333368999999999 77777765 45566654432
Q ss_pred CeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCC----C
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND----H 254 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d----~ 254 (406)
+... .+.. ...+...+|+|+++ .+++.+.++.+.+||+.++........+. .+++|+|||+++++++.| +
T Consensus 101 g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 101 GEEQ-RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TCCE-ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEE
T ss_pred Cccc-cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 3322 22344678888886 33344444455599999987665554433 789999999999988877 7
Q ss_pred eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC--cEEEEECCCCeEEEEEeC
Q psy226 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK--TIKLWDVGSGSLLFTLIG 332 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~~~ 332 (406)
.|++||+.+++.. .+..|...+..++|+| +|.+|+++..++ .|++||+.+++.. .+.+
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~Sp------------------DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~ 235 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISP------------------GMKVTAGLETAREARLVTVDPRDGSVE-DLEL 235 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECT------------------TSCEEEEEECSSCEEEEEECTTTCCEE-ECCC
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECC------------------CCCEEEEccCCCeeEEEEEcCCCCcEE-EccC
Confidence 8999999877654 6778888899999998 477888888888 8999999998887 7777
Q ss_pred CCcCEEEEE--------EcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCe---EE
Q psy226 333 HDNWVRGVT--------FHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT---VK 401 (406)
Q Consensus 333 h~~~v~~l~--------~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~---v~ 401 (406)
|...+..++ |+|||..+++++.|+++++|++ ++... ...+.|.+++|+ +++++++++.+.+ +.
T Consensus 236 ~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~ 309 (582)
T 3o4h_A 236 PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIV 309 (582)
T ss_dssp SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEE
Confidence 877777777 9999999999999999999999 65544 334678999999 9999999888754 56
Q ss_pred Eeec
Q psy226 402 VWEC 405 (406)
Q Consensus 402 iw~~ 405 (406)
+|+.
T Consensus 310 ~~d~ 313 (582)
T 3o4h_A 310 SLPS 313 (582)
T ss_dssp EETT
T ss_pred EEcC
Confidence 6553
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=2.8e-25 Score=234.13 Aligned_cols=273 Identities=12% Similarity=-0.000 Sum_probs=223.2
Q ss_pred CCCCeEEEEEc-CCCCEEEEEeCCCcEEEEEcCCCcEEEEeccccc-CeeeEEECCCCCEEEEEeCCCcEE-EEeCCCCe
Q psy226 105 HRSPVIKVIFH-PVFSLMASCSEDATIRLWDYETGEYERALHGHLD-SVQDIAFDQSGKLLVSCSADMSLK-LWDMSTYQ 181 (406)
Q Consensus 105 h~~~V~~v~~~-p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~-~V~~l~~~~~g~~l~sgs~d~~i~-vwd~~~~~ 181 (406)
|...|.+++|+ |+++.||+++ ++.|.+|+..+++.. .+..|.. .+.+++|+ +|+.|+.++.+..+. +||+.+++
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK 370 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence 44578999999 9999999988 889999999888754 3666777 89999999 999999999888888 99998776
Q ss_pred EEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCC-------
Q psy226 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH------- 254 (406)
Q Consensus 182 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~------- 254 (406)
.. .+.+|...+..++|+|+|++|++++.++.|++||+.++.....+.+|...+..++|+|||++|++++.++
T Consensus 371 ~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 371 AE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp EE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence 54 4447888999999999999999999999999999999988888878999999999999999998887654
Q ss_pred ---eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe------
Q psy226 255 ---TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS------ 325 (406)
Q Consensus 255 ---~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~------ 325 (406)
.|++||+.+++ ...+..|...+..++|+| +|.+|+.++.++..++|+.....
T Consensus 450 ~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~sp------------------dG~~l~~~s~~~~~~~~~~~~~~~~~~~~ 510 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK-IFAATTENSHDYAPAFDA------------------DSKNLYYLSYRSLDPSPDRVVLNFSFEVV 510 (1045)
T ss_dssp CEEEEEEEETTTTE-EEECSCSSSBEEEEEECT------------------TSCEEEEEESCCCCCEECSSSSCEECCSC
T ss_pred CCCeEEEEECCCCc-EEEeeCCCcccCCceEcC------------------CCCEEEEEecccCCcCcchhccccccccC
Confidence 89999998876 666778888888999998 46778888877766666543221
Q ss_pred -------------------------------------EEEEEeCCCcCEEEEEEcCCCCEEEE-------------EeCC
Q psy226 326 -------------------------------------LLFTLIGHDNWVRGVTFHPGGKYLVS-------------CGDD 355 (406)
Q Consensus 326 -------------------------------------~~~~~~~h~~~v~~l~~s~~g~~l~s-------------gs~d 355 (406)
.+..+..|...+..++++|+|+++++ .+.+
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~ 590 (1045)
T 1k32_A 511 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK 590 (1045)
T ss_dssp BEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCC
T ss_pred ceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCC
Confidence 12234456677899999999988875 1235
Q ss_pred CeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 356 KTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 356 ~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
..|++||+.+++. ..+. ..+.+++|+|||++|++++.| .|++||.
T Consensus 591 ~~l~~~d~~~~~~-~~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~ 635 (1045)
T 1k32_A 591 GVLLKYDVKTRKV-TEVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFP 635 (1045)
T ss_dssp EEEEEEETTTCCE-EEEE---EEEEEEEECTTSCEEEEEETT-SCEEEEE
T ss_pred ceEEEEECCCCcE-EEee---cCcceEEECCCCCEEEEEcCC-cEEEEeC
Confidence 6788999988764 3333 568899999999999999866 7999986
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.7e-24 Score=199.09 Aligned_cols=265 Identities=13% Similarity=0.159 Sum_probs=188.9
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCC-CcEEEEEcC--CCcEE--EEecccccCeeeEEECCCCCEEEEEeC-CCcEEEEe
Q psy226 103 SGHRSPVIKVIFHPVFSLMASCSED-ATIRLWDYE--TGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSA-DMSLKLWD 176 (406)
Q Consensus 103 ~~h~~~V~~v~~~p~~~~latgs~d-g~v~vwd~~--~~~~~--~~~~~h~~~V~~l~~~~~g~~l~sgs~-d~~i~vwd 176 (406)
..|...+.+++|+|++++|++++.+ +.|.+|++. +++.. ..+..+. .+.+++|+|+|++|++++. ++.|.+||
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d 112 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTR 112 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEE
Confidence 4577789999999999998888887 999999997 66543 3344333 7899999999998876665 88999999
Q ss_pred C---CCCeEEEEEecCCcceEEEEEecCCCEEEEEe-CCCcEEEEEcCC-CeEEE----Eeec-CCccEEEEEECCCCCE
Q psy226 177 M---STYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS-RDKTIKMWEVAT-GYCVK----TLTG-HREWVRQIKVSPDGTL 246 (406)
Q Consensus 177 ~---~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~iwd~~~-~~~~~----~~~~-~~~~v~~l~~~~~~~~ 246 (406)
+ .+.+....+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ +.... .+.. ....+..++|+|+|++
T Consensus 113 ~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 113 LEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp EETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 9 444455555444 4588999999999888877 899999999987 64432 2222 3346888999999997
Q ss_pred EEEEe-CCCeEEEEeCCC--ccc--eeEEe----cC--CceEEEEEeCCCCCccccccccCCCCCCCCCCEEE-EEeCCC
Q psy226 247 LASCS-NDHTARVWSLAT--KET--KAELR----GH--DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA-TGSRDK 314 (406)
Q Consensus 247 l~s~~-~d~~v~vwd~~~--~~~--~~~~~----~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-s~~~d~ 314 (406)
++.++ .++.+.+|++.. +.. ..... ++ ...+..++|+| ++.+++ ++..++
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~------------------dg~~l~v~~~~~~ 253 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITP------------------DGRHLYACDRTAS 253 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECT------------------TSSEEEEEETTTT
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECC------------------CCCEEEEEecCCC
Confidence 75554 899999999954 222 11221 11 22455678877 355565 555789
Q ss_pred cEEEEECC--C--CeEEEEEeCCCcCEEEEEEcCCCCEEEEEe-CCCeEEEEeC--CCCc--cceeeccccceEEEEEEe
Q psy226 315 TIKLWDVG--S--GSLLFTLIGHDNWVRGVTFHPGGKYLVSCG-DDKTLRVWDT--ANKR--NMKTLEAHSHFVTSLDFH 385 (406)
Q Consensus 315 ~i~lwd~~--~--~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs-~d~~i~vwd~--~~~~--~~~~l~~h~~~v~~l~~~ 385 (406)
.|++||+. + .+.+..+..+.. +.+++|+|+|++|++++ .++.|.+|++ .+++ .+..+... ....+++|.
T Consensus 254 ~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~ 331 (343)
T 1ri6_A 254 LITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVN 331 (343)
T ss_dssp EEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEE
T ss_pred EEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEE
Confidence 99999998 3 344555555544 88999999999988887 6899999954 4543 33444332 345677777
Q ss_pred CCCC
Q psy226 386 RAHP 389 (406)
Q Consensus 386 ~~~~ 389 (406)
|+..
T Consensus 332 ~~~~ 335 (343)
T 1ri6_A 332 AHEG 335 (343)
T ss_dssp EEC-
T ss_pred cccC
Confidence 6543
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.8e-25 Score=200.70 Aligned_cols=237 Identities=14% Similarity=0.103 Sum_probs=187.8
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CcEEEEeccc-ccCeeeEEECCCCCEEEEEe--CCCcEEE
Q psy226 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERALHGH-LDSVQDIAFDQSGKLLVSCS--ADMSLKL 174 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~-~~~~~~~~~h-~~~V~~l~~~~~g~~l~sgs--~d~~i~v 174 (406)
...+..|...|.+++|+|++++|++++ ++.|++||+.+ ++......+| ...|.+++|+|+|++|++++ .++..+|
T Consensus 34 ~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 34 MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 345667899999999999999999987 78999999999 8877766666 47899999999999999998 3345555
Q ss_pred Ee--CCCCeEEEEEecCCcceEEEEEecCCCEEE-EEeCCCcEEEEEcCC-CeEEEEeecCCccEEEEEECCCCCEEEEE
Q psy226 175 WD--MSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDKTIKMWEVAT-GYCVKTLTGHREWVRQIKVSPDGTLLASC 250 (406)
Q Consensus 175 wd--~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~i~iwd~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~ 250 (406)
|. ..+++ ...+..+. .+..++|+|++++|+ +++.|+.+++|++.. +.....+..+...+.+++|+|+|++++.+
T Consensus 113 ~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 190 (297)
T 2ojh_A 113 YLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFN 190 (297)
T ss_dssp EEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEE
T ss_pred EEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEE
Confidence 54 45544 33444333 588999999999877 788899999998632 33446677788889999999999988776
Q ss_pred e-CCCeEEEEeCC-CccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC-----------CcEE
Q psy226 251 S-NDHTARVWSLA-TKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD-----------KTIK 317 (406)
Q Consensus 251 ~-~d~~v~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----------~~i~ 317 (406)
+ .++.+++|++. .......+..|...+..+.|+| ++.+|++++.+ +.|.
T Consensus 191 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~------------------dg~~l~~~~~~~~~~~~~~~~~~~l~ 252 (297)
T 2ojh_A 191 SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSP------------------SGDKVVFVSYDADVFDHPRDLDVRVQ 252 (297)
T ss_dssp ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECT------------------TSSEEEEEEEETTCCSCCSSEEEEEE
T ss_pred ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECC------------------CCCEEEEEEcCCCCCcccccCceEEE
Confidence 6 59999999986 4555667777888899999998 46778777765 5699
Q ss_pred EEECCCCeE--EEEEeCCCcCEEEEEEcCCCCEEEEEeCCC
Q psy226 318 LWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356 (406)
Q Consensus 318 lwd~~~~~~--~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~ 356 (406)
+||+.+++. +..+.+|...+.+++|+|+|++|++++.+.
T Consensus 253 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 253 LMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 999988754 445557888899999999999998877653
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=1.7e-23 Score=193.36 Aligned_cols=261 Identities=16% Similarity=0.216 Sum_probs=185.2
Q ss_pred CCCcEEEEEc--CCCcEEE-EecccccCeeeEEECCCCCEEEEEeC---CCcEEEEeCCCCe--EEEEEecCCcceEEEE
Q psy226 126 EDATIRLWDY--ETGEYER-ALHGHLDSVQDIAFDQSGKLLVSCSA---DMSLKLWDMSTYQ--CLKTMQGHDHNVTGVA 197 (406)
Q Consensus 126 ~dg~v~vwd~--~~~~~~~-~~~~h~~~V~~l~~~~~g~~l~sgs~---d~~i~vwd~~~~~--~~~~~~~h~~~v~~~~ 197 (406)
.++.|.+|++ .++++.. ....+...+..++|+|+|+ |++++. ++.|.+||+.+++ .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 3556777765 4566543 3345667788999999999 555554 6899999997665 3445455777888999
Q ss_pred EecCCCEEEEEe-CCCcEEEEEcC-CCe--EEEEeec---------CCccEEEEEECCCCCEEEEEeCCCeEEEEeCC-C
Q psy226 198 FLPNSDFVLSAS-RDKTIKMWEVA-TGY--CVKTLTG---------HREWVRQIKVSPDGTLLASCSNDHTARVWSLA-T 263 (406)
Q Consensus 198 ~~p~~~~l~s~s-~d~~i~iwd~~-~~~--~~~~~~~---------~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~-~ 263 (406)
|+|++++|++++ .+++|.+|++. ++. .+..+.. +...+.+++|+|+|+++++...++.|++|++. +
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~ 172 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDA 172 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCC
Confidence 999999888887 68999999995 332 2333321 12347889999999977777778999999998 3
Q ss_pred ccce--eEEecC-CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE-EeCCCcEEEEECCC--CeE--EEEEeCCC-
Q psy226 264 KETK--AELRGH-DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT-GSRDKTIKLWDVGS--GSL--LFTLIGHD- 334 (406)
Q Consensus 264 ~~~~--~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~lwd~~~--~~~--~~~~~~h~- 334 (406)
+... ..+..+ ...+..++|+| +|.++++ +..++.|++|++.. ++. +..+....
T Consensus 173 g~~~~~~~~~~~~g~~p~~~~~sp------------------dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 234 (347)
T 3hfq_A 173 GQLSEQSVLTMEAGFGPRHLVFSP------------------DGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA 234 (347)
T ss_dssp SCEEEEEEEECCTTCCEEEEEECT------------------TSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT
T ss_pred CcEEEeeeEEcCCCCCCceEEECC------------------CCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC
Confidence 3322 112222 23566788887 4665544 56788999999864 543 22333322
Q ss_pred -----cCEEEEEEcCCCCEE-EEEeCCCeEEEEeCCC---CccceeeccccceEEEEEEeCCCCEEEEeeCC-CeEEEee
Q psy226 335 -----NWVRGVTFHPGGKYL-VSCGDDKTLRVWDTAN---KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD-KTVKVWE 404 (406)
Q Consensus 335 -----~~v~~l~~s~~g~~l-~sgs~d~~i~vwd~~~---~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~D-g~v~iw~ 404 (406)
..+..++|+|+|++| +++..++.|.+||+.. .+.+..+..+...+..++|+|++++|++++.+ +.|.+|+
T Consensus 235 ~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 235 DYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp TCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 458899999999987 5666789999999873 24455566666678899999999988877654 8999995
Q ss_pred c
Q psy226 405 C 405 (406)
Q Consensus 405 ~ 405 (406)
+
T Consensus 315 ~ 315 (347)
T 3hfq_A 315 R 315 (347)
T ss_dssp E
T ss_pred E
Confidence 4
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=4.2e-24 Score=196.97 Aligned_cols=272 Identities=11% Similarity=0.046 Sum_probs=193.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccc-cCeeeEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEec
Q psy226 111 KVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHL-DSVQDIAFDQSGKLLV-SCSADMSLKLWDMSTYQCLKTMQG 188 (406)
Q Consensus 111 ~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~-~~V~~l~~~~~g~~l~-sgs~d~~i~vwd~~~~~~~~~~~~ 188 (406)
.+++++++.++++++.+++|++||..+++....+..+. ..+..++|+|+|++++ ++..++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45688889999999999999999999999887776543 2578999999998665 555789999999999988777653
Q ss_pred CC------cceEEEEEecCCCEEEEEeCC------------CcEEEEEcCCCe---EEEEeecCCccEEEEEECCCCCEE
Q psy226 189 HD------HNVTGVAFLPNSDFVLSASRD------------KTIKMWEVATGY---CVKTLTGHREWVRQIKVSPDGTLL 247 (406)
Q Consensus 189 h~------~~v~~~~~~p~~~~l~s~s~d------------~~i~iwd~~~~~---~~~~~~~~~~~v~~l~~~~~~~~l 247 (406)
.. ..+.+++|+|+++++++++.+ +.|.+||+.++. .+..+.. ...+.+++|+|+|+ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-E
Confidence 32 237789999999999988865 899999998853 3334433 34588899999999 5
Q ss_pred EEEeCCCeEEEEeCCCccceeEEecCCc------------------------eEEEEEeCCCCCccccccccCCCCCCCC
Q psy226 248 ASCSNDHTARVWSLATKETKAELRGHDH------------------------TVECVAWAPGVASESISEAAGRPPGQGG 303 (406)
Q Consensus 248 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (406)
++++. .|.+||+.+++....+..+.. ....+++.++....
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-------------- 225 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD-------------- 225 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC--------------------
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCC--------------
Confidence 55543 499999988776655543220 11222222210000
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEE-EEEeCCCcCEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEE
Q psy226 304 GPYLATGSRDKTIKLWDVGSGSLL-FTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTS 381 (406)
Q Consensus 304 ~~~l~s~~~d~~i~lwd~~~~~~~-~~~~~h~~~v~~l~~s~-~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~ 381 (406)
.........+..+|..+++.. ..+..+...+.+++|+| +|++++++ ++.|++||+.+++.+..+... ..+.+
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~ 299 (349)
T 1jmx_B 226 ---PATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYC 299 (349)
T ss_dssp ----CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCE
T ss_pred ---ccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccc
Confidence 000000001222444444321 12233566789999999 99999988 889999999998887777543 34679
Q ss_pred EEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 382 LDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 382 l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
++|+|++++|++++.++.|.+||.+
T Consensus 300 ~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 300 VAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEECSSSSCEEEESBSSEEEEEETT
T ss_pred eEECCCCCEEEEecCCCeEEEEecc
Confidence 9999999988888899999999963
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=8.8e-25 Score=221.27 Aligned_cols=271 Identities=15% Similarity=0.174 Sum_probs=199.4
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEE-EEecccc-----------------cCeeeEEECCCCCEEEEEeCCC
Q psy226 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYE-RALHGHL-----------------DSVQDIAFDQSGKLLVSCSADM 170 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~-~~~~~h~-----------------~~V~~l~~~~~g~~l~sgs~d~ 170 (406)
+..+.|. +..+++++.|+ | +||..+++.. ..+..|. ..|.+++|+|+ ..++.+ .|+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECC
Confidence 3446677 66778888888 8 9999999873 3343333 46999999999 666555 459
Q ss_pred cEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC-----CeEEEEeecCCcc-----------
Q psy226 171 SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT-----GYCVKTLTGHREW----------- 234 (406)
Q Consensus 171 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~-----~~~~~~~~~~~~~----------- 234 (406)
.|++||+.+++.. .+..+...+.+++|+|+|+.|+++ .|+.|++||+.+ +........+...
T Consensus 102 ~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 102 GLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp EEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred EEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence 9999999988764 444567778899999999999885 689999999998 7765544444332
Q ss_pred ---EEEEEECCCCCEEEEEe---------------------------------CCCeEEEEeCCCccceeEE--ecCCce
Q psy226 235 ---VRQIKVSPDGTLLASCS---------------------------------NDHTARVWSLATKETKAEL--RGHDHT 276 (406)
Q Consensus 235 ---v~~l~~~~~~~~l~s~~---------------------------------~d~~v~vwd~~~~~~~~~~--~~~~~~ 276 (406)
+..++|+|||++|++++ .+..|++||+.+++..... ..|...
T Consensus 180 ~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 259 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKF 259 (706)
T ss_dssp TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCE
T ss_pred cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCcee
Confidence 47899999999999987 4578999999887654333 246678
Q ss_pred EEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC-----cEEEEECCCCeEEEEEe--CCCcC---EEEEEEcC--
Q psy226 277 VECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK-----TIKLWDVGSGSLLFTLI--GHDNW---VRGVTFHP-- 344 (406)
Q Consensus 277 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~lwd~~~~~~~~~~~--~h~~~---v~~l~~s~-- 344 (406)
+..++|+| +|.++++++.++ .|++||+.+++....+. .+..+ +.+++|+|
T Consensus 260 ~~~~~~sp------------------dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~ 321 (706)
T 2z3z_A 260 LTNLSWSP------------------DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGS 321 (706)
T ss_dssp EEEEEECT------------------TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTC
T ss_pred EeeEEEEC------------------CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCC
Confidence 99999998 477788877765 89999999984333332 23332 46789999
Q ss_pred CCCEEEEEeCCCeEEEEeCC-CCccceeeccccceEEE-EEEeCCCCEEEEee-CCC----eEEEeec
Q psy226 345 GGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTS-LDFHRAHPYVVTGS-VDK----TVKVWEC 405 (406)
Q Consensus 345 ~g~~l~sgs~d~~i~vwd~~-~~~~~~~l~~h~~~v~~-l~~~~~~~~l~sgs-~Dg----~v~iw~~ 405 (406)
+|++|++++.|+.++||++. ++..+..+..|...+.+ ++|+|+++.|+.++ .++ .|..||.
T Consensus 322 dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 322 NNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred CCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 99999999999999999876 56667778777777776 89999999876554 444 4555553
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=6.8e-25 Score=222.59 Aligned_cols=275 Identities=10% Similarity=0.082 Sum_probs=199.8
Q ss_pred EEeccCCC---CeEEEEEcCCCCEEEEEeCC---------CcEEEEEcCCCcEEEEec---ccccCeeeEEECCCCCEEE
Q psy226 100 FALSGHRS---PVIKVIFHPVFSLMASCSED---------ATIRLWDYETGEYERALH---GHLDSVQDIAFDQSGKLLV 164 (406)
Q Consensus 100 ~~l~~h~~---~V~~v~~~p~~~~latgs~d---------g~v~vwd~~~~~~~~~~~---~h~~~V~~l~~~~~g~~l~ 164 (406)
..+.+|.. .|.+++||||+++|++++.+ +.+.+||+.+++. ..+. +|...+..++|+|||+.|+
T Consensus 51 ~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la 129 (723)
T 1xfd_A 51 VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLI 129 (723)
T ss_dssp EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEE
T ss_pred EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEE
Confidence 34555654 49999999999999999875 7788999999876 3333 4555689999999999999
Q ss_pred EEeCCCcEEEEeCCCCeEEEEEecCCcce------------------EEEEEecCCCEEEEEeCCC--------------
Q psy226 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNV------------------TGVAFLPNSDFVLSASRDK-------------- 212 (406)
Q Consensus 165 sgs~d~~i~vwd~~~~~~~~~~~~h~~~v------------------~~~~~~p~~~~l~s~s~d~-------------- 212 (406)
.++. +.|++||+.+++.......+...+ .+++|+|||+.|++++.|+
T Consensus 130 ~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~ 208 (723)
T 1xfd_A 130 FIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGS 208 (723)
T ss_dssp EEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSS
T ss_pred EEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCc
Confidence 9886 799999999887766655544433 7899999999999887653
Q ss_pred --------------------cEEEEEcCCCeEEEEeecC------CccEEEEEECCCCCEEEEEeC----CCeEEEEeCC
Q psy226 213 --------------------TIKMWEVATGYCVKTLTGH------REWVRQIKVSPDGTLLASCSN----DHTARVWSLA 262 (406)
Q Consensus 213 --------------------~i~iwd~~~~~~~~~~~~~------~~~v~~l~~~~~~~~l~s~~~----d~~v~vwd~~ 262 (406)
.|++||+.++.....+..+ ...+..++|+|||+++++.+. +..|++||+.
T Consensus 209 ~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~ 288 (723)
T 1xfd_A 209 IYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDAT 288 (723)
T ss_dssp SSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETT
T ss_pred CCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCC
Confidence 7999999988765666654 667899999999998877653 3679999998
Q ss_pred CccceeEEec-CCceE----EEEEeCCCCCccccccccCCCCCCCCCCEEEE--EeCCC------cEEEEE-CCCCe--E
Q psy226 263 TKETKAELRG-HDHTV----ECVAWAPGVASESISEAAGRPPGQGGGPYLAT--GSRDK------TIKLWD-VGSGS--L 326 (406)
Q Consensus 263 ~~~~~~~~~~-~~~~v----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~------~i~lwd-~~~~~--~ 326 (406)
+++....+.. +...+ ..++|+| +|..|+. +..++ .|.+|| ...+. +
T Consensus 289 ~g~~~~~~~~~~~~~~~~~~~~~~~sp------------------dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 350 (723)
T 1xfd_A 289 TGVCTKKHEDESEAWLHRQNEEPVFSK------------------DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN 350 (723)
T ss_dssp TCCEEEEEEEECSSCCCCCCCCCEECT------------------TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC
T ss_pred CCcceEEEEeccCCEEeccCCCceEcC------------------CCCeEEEEEecccCCCcceeEEEEEeccCCCCccc
Confidence 8776554433 22222 2567776 3554543 55666 577788 34443 1
Q ss_pred EEEEeCCCcCEEE-EEEcCCCCEEEEEeCC---CeEEEEeCCCCc--cceeecc---ccceEEEEEEeCCCCEEEEe
Q psy226 327 LFTLIGHDNWVRG-VTFHPGGKYLVSCGDD---KTLRVWDTANKR--NMKTLEA---HSHFVTSLDFHRAHPYVVTG 394 (406)
Q Consensus 327 ~~~~~~h~~~v~~-l~~s~~g~~l~sgs~d---~~i~vwd~~~~~--~~~~l~~---h~~~v~~l~~~~~~~~l~sg 394 (406)
...+..+...+.. ++|+|+|++|+..+.+ +.+++|++.... ....+.. |...+..++|+|++++|+..
T Consensus 351 ~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 351 IQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp CCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred eeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 4444433333444 6999999999766554 789999986432 3344543 56678899999999988754
No 149
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=4.6e-23 Score=188.98 Aligned_cols=245 Identities=11% Similarity=0.114 Sum_probs=180.9
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCcE-EEEecccccCeeeEEECCCCCEEEEEeCCC---cEEEEe
Q psy226 102 LSGHRSPVIKVIFHPVFSLMASCSE-DATIRLWDYETGEY-ERALHGHLDSVQDIAFDQSGKLLVSCSADM---SLKLWD 176 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~~latgs~-dg~v~vwd~~~~~~-~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~---~i~vwd 176 (406)
+..+..++ +++|+|+++++++++. ++.|.+||..+++. ...+..+..+..+++|+|+|++|+++..++ .|.+||
T Consensus 36 ~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 36 ITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp EECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEE
T ss_pred EEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEE
Confidence 34455566 9999999996666555 89999999999987 777777777776699999999999555553 899999
Q ss_pred CCCCeEEEEEecCCcceEEEEEecCCCEEEE-EeCCCc-EEEEEcCCCeEE----EEeecCCccEEEEEECCCCCEE-EE
Q psy226 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS-ASRDKT-IKMWEVATGYCV----KTLTGHREWVRQIKVSPDGTLL-AS 249 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s-~s~d~~-i~iwd~~~~~~~----~~~~~~~~~v~~l~~~~~~~~l-~s 249 (406)
+.+++.+..+..+ ....+++|+|+|+++++ ...++. |.+|++.....+ ............++|+|+|+++ ++
T Consensus 115 ~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 115 FLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp TTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred CCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 9999888777654 45689999999985554 456688 999998753322 1122334557899999999965 45
Q ss_pred EeCCCeEEEEeCCCccc---eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEE-eCCCcEEEEECCCCe
Q psy226 250 CSNDHTARVWSLATKET---KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATG-SRDKTIKLWDVGSGS 325 (406)
Q Consensus 250 ~~~d~~v~vwd~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~lwd~~~~~ 325 (406)
+..++.|++||+.+++. +..+..+ ..+..++|+| +|.+++++ ..++.|.+||+.+++
T Consensus 194 ~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~sp------------------dg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 194 NLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSR------------------DGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp ETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECT------------------TSSEEEEECSSEEEEEEEETTTTE
T ss_pred eCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECC------------------CCCEEEEEEcCCCEEEEEECCCCc
Confidence 55789999999988877 5555543 4456777877 46655554 457889999999988
Q ss_pred E--EEEEeCC----CcC---EEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCc
Q psy226 326 L--LFTLIGH----DNW---VRGVTFHPGGKYLVSCG-DDKTLRVWDTANKR 367 (406)
Q Consensus 326 ~--~~~~~~h----~~~---v~~l~~s~~g~~l~sgs-~d~~i~vwd~~~~~ 367 (406)
. +..+..+ ... ...++|+|+|++|++++ .++.|.+||+....
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 255 LSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred eeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 7 4444332 222 24589999999886555 56799999997654
No 150
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=220.59 Aligned_cols=272 Identities=11% Similarity=0.101 Sum_probs=201.3
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEeccccc---CeeeEEECCCCCEEEEEeC---------CCcEEEEeCC
Q psy226 111 KVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD---SVQDIAFDQSGKLLVSCSA---------DMSLKLWDMS 178 (406)
Q Consensus 111 ~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~---~V~~l~~~~~g~~l~sgs~---------d~~i~vwd~~ 178 (406)
.++|+|++.+++++ .|++|++||..+++....+.+|.. .|.+++|+|||++|++++. |+.|++||+.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 56899999665554 699999999999998877776654 4999999999999998876 7899999999
Q ss_pred CCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEe-ec--------CCccE---------EEEEE
Q psy226 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL-TG--------HREWV---------RQIKV 240 (406)
Q Consensus 179 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~--------~~~~v---------~~l~~ 240 (406)
+++.+... .....+..++|+|||+.|+.++ |+.|++||+.++...... .+ +..+| ..++|
T Consensus 99 ~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 99 NGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 88762101 1124688899999999999885 789999999888765432 22 22222 48999
Q ss_pred CCCCCEEEEEeCCC----------------------------------eEEEEeCCCccce--------eEEecCCceEE
Q psy226 241 SPDGTLLASCSNDH----------------------------------TARVWSLATKETK--------AELRGHDHTVE 278 (406)
Q Consensus 241 ~~~~~~l~s~~~d~----------------------------------~v~vwd~~~~~~~--------~~~~~~~~~v~ 278 (406)
+|||+.|++++.|. .|++||+.++... ..+.+|...+.
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEE
Confidence 99999999988652 7889999887642 12346888899
Q ss_pred EEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC----cEEEEE----CCCCeEEEEE----eCCCcCEE-----EEE
Q psy226 279 CVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK----TIKLWD----VGSGSLLFTL----IGHDNWVR-----GVT 341 (406)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~----~i~lwd----~~~~~~~~~~----~~h~~~v~-----~l~ 341 (406)
.++|+|+ +.++++....+ .|.+|| +.++++...+ .+|..++. .+.
T Consensus 257 ~~~~SpD------------------~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (719)
T 1z68_A 257 WLTWVTD------------------ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPV 318 (719)
T ss_dssp EEEESSS------------------SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCE
T ss_pred EeEEeCC------------------CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccE
Confidence 9999984 45566644332 488999 8777655444 46777776 889
Q ss_pred EcCCCCEEEE--EeCCC--eEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCC-----CeEEEeec
Q psy226 342 FHPGGKYLVS--CGDDK--TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD-----KTVKVWEC 405 (406)
Q Consensus 342 ~s~~g~~l~s--gs~d~--~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~D-----g~v~iw~~ 405 (406)
|+|+|+.|+. ...+| .|++||+.+++ ...+..+...+..+.+. ++..|+..+.+ +.+++|.+
T Consensus 319 ~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 319 FSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp ECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred ECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 9999996543 44555 57777877665 45565555567777777 77777666554 88899874
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.4e-23 Score=199.84 Aligned_cols=199 Identities=14% Similarity=0.122 Sum_probs=156.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-----------cEEE----EecccccCeeeEEECCCCCEEE----EE
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-----------EYER----ALHGHLDSVQDIAFDQSGKLLV----SC 166 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~-----------~~~~----~~~~h~~~V~~l~~~~~g~~l~----sg 166 (406)
...++.+++++++.++++|+.|+ ++||+.... .... ....|...|.+++|+|+|++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34588999999999999999998 999874321 1110 0113556799999999999999 78
Q ss_pred eCCCcEEEEeCCCC--------e---EEEEEecCCcceEEEEEecC-CCEEEEEeCCCcEEEEEcCCCeEEEEeecCCcc
Q psy226 167 SADMSLKLWDMSTY--------Q---CLKTMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234 (406)
Q Consensus 167 s~d~~i~vwd~~~~--------~---~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~ 234 (406)
+.|++|++||+.++ + .+..+.+|...|.+++|+|+ +++|++++.|++|++||++++..+....+|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 89999999998654 1 24566789999999999998 789999999999999999999877777889999
Q ss_pred EEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecC-------CceEEEEEeCCCCCccccccccCCCCCCCCCCEE
Q psy226 235 VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH-------DHTVECVAWAPGVASESISEAAGRPPGQGGGPYL 307 (406)
Q Consensus 235 v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 307 (406)
|.+++|+|+|++|++|+.||+|++||++ ......+..| ...+.++.|.+. +.++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~------------------~~~l 255 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGT------------------YVFA 255 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEET------------------TEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecC------------------ceEE
Confidence 9999999999999999999999999998 4444444433 337889999873 3344
Q ss_pred EE-EeCCC------cEEEEECCCC
Q psy226 308 AT-GSRDK------TIKLWDVGSG 324 (406)
Q Consensus 308 ~s-~~~d~------~i~lwd~~~~ 324 (406)
++ ++.|| .+++|+++..
T Consensus 256 ~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 256 IVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEccCCCccCCCCceEEEEeccC
Confidence 33 34443 3899999754
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.93 E-value=7.6e-23 Score=188.95 Aligned_cols=237 Identities=12% Similarity=0.101 Sum_probs=191.0
Q ss_pred ccCeeeEEECCCCCEEEEEeC-------CCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEE-EEeCCCcEEEEEc
Q psy226 148 LDSVQDIAFDQSGKLLVSCSA-------DMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDKTIKMWEV 219 (406)
Q Consensus 148 ~~~V~~l~~~~~g~~l~sgs~-------d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-s~s~d~~i~iwd~ 219 (406)
...+..++|+|+|+++++++. ++.|.+||..+++.+..+... ..+.+++|+|++++++ +...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 456789999999999888874 568999999999888777643 4577899999999655 4555799999999
Q ss_pred CCCeEEEEeecCCcc---------EEEEEECCCCCEEEEEe--CCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCc
Q psy226 220 ATGYCVKTLTGHREW---------VRQIKVSPDGTLLASCS--NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288 (406)
Q Consensus 220 ~~~~~~~~~~~~~~~---------v~~l~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 288 (406)
.++..+..+..+... +..++|+|+|+++++++ .++.|.+||+.+.+....+..+...+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~---- 194 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDS---- 194 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEET----
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECC----
Confidence 999988887765422 68899999999877766 488999999998887777764555566777776
Q ss_pred cccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC----CCcCEEEEEEcCCCCEEEEEeC-CCeEEEEeC
Q psy226 289 ESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG----HDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDT 363 (406)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~----h~~~v~~l~~s~~g~~l~sgs~-d~~i~vwd~ 363 (406)
++.++++++.++.|.+||+.+++.+..+.. +...+.+++|+|+|+++++++. ++.|.+||.
T Consensus 195 --------------dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 195 --------------EGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp --------------TTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred --------------CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 467888899999999999999998877664 5567889999999998776664 599999999
Q ss_pred CCCccceeeccccceEEEEEEeCCCCEEE-EeeCCCeEEEeec
Q psy226 364 ANKRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWEC 405 (406)
Q Consensus 364 ~~~~~~~~l~~h~~~v~~l~~~~~~~~l~-sgs~Dg~v~iw~~ 405 (406)
.+++.+..+..... ..++|+|++++++ ++..++.|.+||.
T Consensus 261 ~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 261 RNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp TTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 99988877765432 5789999999654 4557999999996
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1.6e-22 Score=187.96 Aligned_cols=259 Identities=12% Similarity=0.192 Sum_probs=181.9
Q ss_pred CCCcEEEEEc--CCCcEEEEecccccCeeeEEECCCCCEEEEEeCC----CcEEEEeCCC--Ce--EEEEEecCCcceEE
Q psy226 126 EDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD----MSLKLWDMST--YQ--CLKTMQGHDHNVTG 195 (406)
Q Consensus 126 ~dg~v~vwd~--~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d----~~i~vwd~~~--~~--~~~~~~~h~~~v~~ 195 (406)
.++.|.+|++ .++++......+...+..++|+|+|++|++++.+ +.|.+|++.. ++ .+.....+......
T Consensus 25 ~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~ 104 (361)
T 3scy_A 25 NSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCY 104 (361)
T ss_dssp SCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEE
T ss_pred CCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEE
Confidence 4678999966 5666544333377788899999999999999886 7999998764 43 33344445556777
Q ss_pred EEEecCCCEEEEEe-CCCcEEEEEcCCCeEEEE------eec--------CCccEEEEEECCCCCEEEEEe-CCCeEEEE
Q psy226 196 VAFLPNSDFVLSAS-RDKTIKMWEVATGYCVKT------LTG--------HREWVRQIKVSPDGTLLASCS-NDHTARVW 259 (406)
Q Consensus 196 ~~~~p~~~~l~s~s-~d~~i~iwd~~~~~~~~~------~~~--------~~~~v~~l~~~~~~~~l~s~~-~d~~v~vw 259 (406)
+++ ++++|++++ .+++|.+|++.....+.. ..+ +...+.+++|+|+|+++++++ .++.|++|
T Consensus 105 ~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 105 LTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp EEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 777 788777766 578999999975332211 111 122357899999999665555 58999999
Q ss_pred eCCCccc------e-------eEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEEEEECCCCe
Q psy226 260 SLATKET------K-------AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIKLWDVGSGS 325 (406)
Q Consensus 260 d~~~~~~------~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~lwd~~~~~ 325 (406)
++..... + .....+...+..++|+| +|.++++++ .++.|.+||+.++.
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp------------------dg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 183 NINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS------------------DGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp EECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT------------------TSSEEEEEETTTCEEEEEEEETTE
T ss_pred EEcCCCCcccccceeecccccceecCCCCCCeEEEEcC------------------CCCEEEEEcCCCCeEEEEEecCCc
Confidence 9875432 1 11223344567888888 466676666 68999999998775
Q ss_pred E--EEEEe---CCCcCEEEEEEcCCCCEEEEEeC--CCeEEEEeCC--CCc--cceeeccccceEEEEEEeCCCCEEEEe
Q psy226 326 L--LFTLI---GHDNWVRGVTFHPGGKYLVSCGD--DKTLRVWDTA--NKR--NMKTLEAHSHFVTSLDFHRAHPYVVTG 394 (406)
Q Consensus 326 ~--~~~~~---~h~~~v~~l~~s~~g~~l~sgs~--d~~i~vwd~~--~~~--~~~~l~~h~~~v~~l~~~~~~~~l~sg 394 (406)
. +..+. .+......++|+|+|++|+++.. ++.|.+|++. +++ .+..+.. ...+.+++|+|++++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~ 323 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVA 323 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEE
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEE
Confidence 4 22332 33455789999999999876665 4899999985 343 3444443 4467899999999988887
Q ss_pred e-CCCeEEEeec
Q psy226 395 S-VDKTVKVWEC 405 (406)
Q Consensus 395 s-~Dg~v~iw~~ 405 (406)
+ .++.|.+|++
T Consensus 324 ~~~~~~v~v~~~ 335 (361)
T 3scy_A 324 CRDTNVIQIFER 335 (361)
T ss_dssp ETTTTEEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 7 6799999754
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=4.3e-23 Score=189.12 Aligned_cols=244 Identities=14% Similarity=0.115 Sum_probs=191.2
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCcEEEEecc-c----ccCeeeEEECCCCCEEEEEe------------CC
Q psy226 108 PVIKVIFHPVFSLM-ASCSEDATIRLWDYETGEYERALHG-H----LDSVQDIAFDQSGKLLVSCS------------AD 169 (406)
Q Consensus 108 ~V~~v~~~p~~~~l-atgs~dg~v~vwd~~~~~~~~~~~~-h----~~~V~~l~~~~~g~~l~sgs------------~d 169 (406)
.+..++|+|+++.+ ++++.++.|.+||..+++....+.. + ...+.+++|+|+|++|++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47789999999765 5666789999999999988776653 2 23688999999999998886 57
Q ss_pred CcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEE
Q psy226 170 MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLAS 249 (406)
Q Consensus 170 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 249 (406)
+.|.+||+.+++....+.. ...+.+++|+|++++|+++ ++.|.+||+.++.....+..+.. ...+.|+|+|..++.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~ 190 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWN 190 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEee
Confidence 9999999999888777664 4467889999999988887 68899999999988877765431 112368999886655
Q ss_pred EeC-CC-----------------------eEEEEeCCCccce-eEEecCCceEEEEEeCCCCCccccccccCCCCCCCCC
Q psy226 250 CSN-DH-----------------------TARVWSLATKETK-AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGG 304 (406)
Q Consensus 250 ~~~-d~-----------------------~v~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (406)
.+. ++ .|.+||+.+.+.. ..+..+...+..++|+| ++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~------------------dg 252 (337)
T 1pby_B 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNP------------------AK 252 (337)
T ss_dssp CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECT------------------TS
T ss_pred eccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECC------------------CC
Confidence 443 22 4689999887653 23344556677888888 46
Q ss_pred CEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecccc
Q psy226 305 PYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS 376 (406)
Q Consensus 305 ~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~ 376 (406)
.+++++ ++.|.+||+.+++.+..+..+ ..+.+++|+|+|++|++++.++.|++||+.+++.+..+..+.
T Consensus 253 ~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 253 TRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp SEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred CEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 677777 789999999999888776643 457899999999999999999999999999998888776543
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.6e-22 Score=186.90 Aligned_cols=247 Identities=12% Similarity=0.163 Sum_probs=177.3
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCcE--EEEecccccCeeeEEECCCCCEEEEEe-CCCcEEEEe
Q psy226 103 SGHRSPVIKVIFHPVFSLMASCSE---DATIRLWDYETGEY--ERALHGHLDSVQDIAFDQSGKLLVSCS-ADMSLKLWD 176 (406)
Q Consensus 103 ~~h~~~V~~v~~~p~~~~latgs~---dg~v~vwd~~~~~~--~~~~~~h~~~V~~l~~~~~g~~l~sgs-~d~~i~vwd 176 (406)
..+...+..++|+|+++ |++++. ++.|++||+.+++. ...+..+...+..++|+|+|++|++++ .++.|.+|+
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34556778899999999 554443 68999999987763 334455778899999999999998888 679999999
Q ss_pred CC-CC--eEEEEEecC---------CcceEEEEEecCCCEEEEEeCCCcEEEEEcC-CCeEEE--EeecC-CccEEEEEE
Q psy226 177 MS-TY--QCLKTMQGH---------DHNVTGVAFLPNSDFVLSASRDKTIKMWEVA-TGYCVK--TLTGH-REWVRQIKV 240 (406)
Q Consensus 177 ~~-~~--~~~~~~~~h---------~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~-~~~~~~--~~~~~-~~~v~~l~~ 240 (406)
+. ++ ..+..+... ...+.+++|+|+++++++...++.|.+||+. ++.... .+..+ ...+..++|
T Consensus 115 ~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 115 IAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp ECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred eCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 96 22 333333221 2248889999999966666678899999998 554322 22222 235778999
Q ss_pred CCCCCEEEE-EeCCCeEEEEeCCC--ccc--eeEEecCC------ceEEEEEeCCCCCccccccccCCCCCCCCCCEE-E
Q psy226 241 SPDGTLLAS-CSNDHTARVWSLAT--KET--KAELRGHD------HTVECVAWAPGVASESISEAAGRPPGQGGGPYL-A 308 (406)
Q Consensus 241 ~~~~~~l~s-~~~d~~v~vwd~~~--~~~--~~~~~~~~------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 308 (406)
+|+|+++++ +..++.+.+|++.. +.. ...+.... ..+..++|+| +|.+| +
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp------------------dG~~l~v 256 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH------------------DGHFLYV 256 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT------------------TSCEEEE
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC------------------CCCEEEE
Confidence 999996655 56789999999874 321 22222222 3477788887 46666 5
Q ss_pred EEeCCCcEEEEECCC---CeEEEEEeCCCcCEEEEEEcCCCCEEEEEeC-CCeEEEE--eCCCCcc
Q psy226 309 TGSRDKTIKLWDVGS---GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVW--DTANKRN 368 (406)
Q Consensus 309 s~~~d~~i~lwd~~~---~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~-d~~i~vw--d~~~~~~ 368 (406)
++..++.|.+||+.. ...+..+..+...+..++|+|+|++|++++. ++.|.+| |..+++.
T Consensus 257 ~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 257 SNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 666789999999872 2555666677777899999999999888775 4899999 5455554
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=4.4e-23 Score=193.34 Aligned_cols=286 Identities=14% Similarity=0.098 Sum_probs=204.2
Q ss_pred eEEeccCCCCeEE-----EEEcCCCCEEEEEeC-CCc--EEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCC
Q psy226 99 KFALSGHRSPVIK-----VIFHPVFSLMASCSE-DAT--IRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADM 170 (406)
Q Consensus 99 ~~~l~~h~~~V~~-----v~~~p~~~~latgs~-dg~--v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~ 170 (406)
...+..|...... .+|+||++.|+.++. +|. |.+||..+++......++...+.++.|+|+|+.|+.++.++
T Consensus 23 ~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (388)
T 3pe7_A 23 VTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGR 102 (388)
T ss_dssp EEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTT
T ss_pred eEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCC
Confidence 3455666655555 789999999998887 674 88889999988877777777777889999999999999999
Q ss_pred cEEEEeCCCCeEEEEEecCCcceEEEE--EecCCCEEEEE----------------------eCCCcEEEEEcCCCeEEE
Q psy226 171 SLKLWDMSTYQCLKTMQGHDHNVTGVA--FLPNSDFVLSA----------------------SRDKTIKMWEVATGYCVK 226 (406)
Q Consensus 171 ~i~vwd~~~~~~~~~~~~h~~~v~~~~--~~p~~~~l~s~----------------------s~d~~i~iwd~~~~~~~~ 226 (406)
.|++||+.+++.......+...+.... ++|++.+++.. +.+..|.+||+.++...
T Consensus 103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~- 181 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST- 181 (388)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-
T ss_pred eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-
Confidence 999999999887766666665554444 48899887742 24468999999988654
Q ss_pred EeecCCccEEEEEECC-CCCEEEEEeCC------CeEEEEeCCCccceeEEecCC--ceEEEEEeCCCCCccccccccCC
Q psy226 227 TLTGHREWVRQIKVSP-DGTLLASCSND------HTARVWSLATKETKAELRGHD--HTVECVAWAPGVASESISEAAGR 297 (406)
Q Consensus 227 ~~~~~~~~v~~l~~~~-~~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~ 297 (406)
.+..+...+..+.|+| +|+.|+.++.+ ..|.++|....... .+..+. ..+....|+|+
T Consensus 182 ~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spd------------ 248 (388)
T 3pe7_A 182 VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPD------------ 248 (388)
T ss_dssp EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTT------------
T ss_pred EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCC------------
Confidence 4446677889999999 99999887764 37788887655433 333333 35777889884
Q ss_pred CCCCCCCCEEEEEeC-CC----cEEEEECCCCeE--EEEEeCCCcC---EEEEEEcCCCCEEEEE---------eCCCeE
Q psy226 298 PPGQGGGPYLATGSR-DK----TIKLWDVGSGSL--LFTLIGHDNW---VRGVTFHPGGKYLVSC---------GDDKTL 358 (406)
Q Consensus 298 ~~~~~~~~~l~s~~~-d~----~i~lwd~~~~~~--~~~~~~h~~~---v~~l~~s~~g~~l~sg---------s~d~~i 358 (406)
|..|+..+. ++ .|.+||+.+++. +..+.++... ...++|+|+|+.|+.. ..+..|
T Consensus 249 ------g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i 322 (388)
T 3pe7_A 249 ------GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL 322 (388)
T ss_dssp ------SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred ------CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence 554544332 22 399999998874 3333331111 1123799999988753 456799
Q ss_pred EEEeCCCCccceeeccccc-----------eEEEEEEeCCCCEEEEee-CCCeEEEeec
Q psy226 359 RVWDTANKRNMKTLEAHSH-----------FVTSLDFHRAHPYVVTGS-VDKTVKVWEC 405 (406)
Q Consensus 359 ~vwd~~~~~~~~~l~~h~~-----------~v~~l~~~~~~~~l~sgs-~Dg~v~iw~~ 405 (406)
++||+.+++. ..+..+.. .+.+++|+|+++.|+..+ .+|...||.+
T Consensus 323 ~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 323 YVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 9999988654 45555544 477889999999887655 5777777753
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=5.4e-23 Score=195.75 Aligned_cols=212 Identities=16% Similarity=0.145 Sum_probs=166.3
Q ss_pred CcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCC-----------eEEE----EEecCCcc
Q psy226 128 ATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY-----------QCLK----TMQGHDHN 192 (406)
Q Consensus 128 g~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~-----------~~~~----~~~~h~~~ 192 (406)
+.+++|+.... .+...++.+++++++.++++++.|+ +++|+.... .... ....+...
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc-------cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 46788764321 1345688999999999999999988 888874210 1100 11235667
Q ss_pred eEEEEEecCCCEEE----EEeCCCcEEEEEcCCC--------e---EEEEeecCCccEEEEEECCC-CCEEEEEeCCCeE
Q psy226 193 VTGVAFLPNSDFVL----SASRDKTIKMWEVATG--------Y---CVKTLTGHREWVRQIKVSPD-GTLLASCSNDHTA 256 (406)
Q Consensus 193 v~~~~~~p~~~~l~----s~s~d~~i~iwd~~~~--------~---~~~~~~~~~~~v~~l~~~~~-~~~l~s~~~d~~v 256 (406)
|.+++|+|++++|+ +|+.|++|++||+.++ . .+..+.+|...|.+++|+|+ +.+|++++.||+|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v 174 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI 174 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE
Confidence 99999999999999 7889999999998765 1 24566789999999999998 8999999999999
Q ss_pred EEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC--
Q psy226 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD-- 334 (406)
Q Consensus 257 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~-- 334 (406)
++||+++........+|...|.+++|+| +|.+|++|+.||.|++||++ +.....+..|.
T Consensus 175 ~iwD~~~~~~~~~~~~~~~~v~~v~wsp------------------dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~ 235 (434)
T 2oit_A 175 AVLQVTETVKVCATLPSTVAVTSVCWSP------------------KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY 235 (434)
T ss_dssp EEEEESSSEEEEEEECGGGCEEEEEECT------------------TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC
T ss_pred EEEEcCCCcceeeccCCCCceeEEEEcC------------------CCCEEEEEcCCCcEEEEccC-CcccccccCCccc
Confidence 9999998866666778899999999998 47789999999999999998 66666655442
Q ss_pred -----cCEEEEEEcCCCCEEEEE-eCCC------eEEEEeCCCC
Q psy226 335 -----NWVRGVTFHPGGKYLVSC-GDDK------TLRVWDTANK 366 (406)
Q Consensus 335 -----~~v~~l~~s~~g~~l~sg-s~d~------~i~vwd~~~~ 366 (406)
..|.+++|++++.++++. +.|| .+++|++...
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 379999999999888653 3443 3899998754
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.91 E-value=2.7e-21 Score=179.64 Aligned_cols=260 Identities=14% Similarity=0.187 Sum_probs=180.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC----CcEEEEEcCC--CcEEE--EecccccCeeeEEECCCCCEEEEEe-CCCcEEEE
Q psy226 105 HRSPVIKVIFHPVFSLMASCSED----ATIRLWDYET--GEYER--ALHGHLDSVQDIAFDQSGKLLVSCS-ADMSLKLW 175 (406)
Q Consensus 105 h~~~V~~v~~~p~~~~latgs~d----g~v~vwd~~~--~~~~~--~~~~h~~~V~~l~~~~~g~~l~sgs-~d~~i~vw 175 (406)
|...+..++|+|++++|++++.+ +.|.+|++.. +++.. ....+......+++ +|++|++++ .++.|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66677889999999999999886 8999998765 54432 33334556777888 788777776 57899999
Q ss_pred eCCCCeEEEE------Eec--------CCcceEEEEEecCCCEEEEEe-CCCcEEEEEcCCCeE-------------EEE
Q psy226 176 DMSTYQCLKT------MQG--------HDHNVTGVAFLPNSDFVLSAS-RDKTIKMWEVATGYC-------------VKT 227 (406)
Q Consensus 176 d~~~~~~~~~------~~~--------h~~~v~~~~~~p~~~~l~s~s-~d~~i~iwd~~~~~~-------------~~~ 227 (406)
++.....+.. ..+ +...+.+++|+|+++++++++ .++.|.+|++..... ...
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~ 205 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAF 205 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccce
Confidence 9874322211 111 122357899999999766555 588999998875331 111
Q ss_pred eecCCccEEEEEECCCCCEEEEEe-CCCeEEEEeCCCccc--eeEEe---cCCceEEEEEeCCCCCccccccccCCCCCC
Q psy226 228 LTGHREWVRQIKVSPDGTLLASCS-NDHTARVWSLATKET--KAELR---GHDHTVECVAWAPGVASESISEAAGRPPGQ 301 (406)
Q Consensus 228 ~~~~~~~v~~l~~~~~~~~l~s~~-~d~~v~vwd~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 301 (406)
...+......++|+|+|+++++++ .++.|.+|++.++.. ...+. .+......++|+|
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp----------------- 268 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP----------------- 268 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT-----------------
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC-----------------
Confidence 223345578899999999887776 699999999986533 22222 2234456888887
Q ss_pred CCCCEEEEEeCC--CcEEEEECC--CCe--EEEEEeCCCcCEEEEEEcCCCCEEEEEe-CCCeEEEEe--CCCCccceee
Q psy226 302 GGGPYLATGSRD--KTIKLWDVG--SGS--LLFTLIGHDNWVRGVTFHPGGKYLVSCG-DDKTLRVWD--TANKRNMKTL 372 (406)
Q Consensus 302 ~~~~~l~s~~~d--~~i~lwd~~--~~~--~~~~~~~h~~~v~~l~~s~~g~~l~sgs-~d~~i~vwd--~~~~~~~~~l 372 (406)
+|++|+++..+ +.|.+|++. ++. .+..+.. ...+.+++|+|+|++|++++ .++.|.+|+ ..+++.....
T Consensus 269 -dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 269 -DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp -TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred -CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 47777666654 899999985 454 3444444 55788999999999988887 679999964 4566544332
Q ss_pred -ccccceEEEEEEe
Q psy226 373 -EAHSHFVTSLDFH 385 (406)
Q Consensus 373 -~~h~~~v~~l~~~ 385 (406)
..+...+.|+.|.
T Consensus 347 ~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 347 KDIKVDKPVCLKFV 360 (361)
T ss_dssp CCEECSSEEEEEEE
T ss_pred eeeeCCCCeEEEEc
Confidence 2244568898885
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=1.7e-21 Score=181.47 Aligned_cols=266 Identities=12% Similarity=0.103 Sum_probs=184.4
Q ss_pred EEEEeCC--CcEEEEEc--CCCcEEEEec---ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC-CCeEEEEEecC-Cc
Q psy226 121 MASCSED--ATIRLWDY--ETGEYERALH---GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS-TYQCLKTMQGH-DH 191 (406)
Q Consensus 121 latgs~d--g~v~vwd~--~~~~~~~~~~---~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~-~~~~~~~~~~h-~~ 191 (406)
++.|+.. +.|.+|++ .++++...-. ++...+..++|+|+|++|++++.+ .|.+|++. +++........ ..
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g 83 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGG 83 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCC
Confidence 4555553 56887764 5665533211 234568899999999999999888 99999997 77664432211 12
Q ss_pred ceEEEEEecCCCE--EEEEe-------------CCCcEEEEEcC-CCeEEEEee----cCCccEEEEEECCCCCEEEEEe
Q psy226 192 NVTGVAFLPNSDF--VLSAS-------------RDKTIKMWEVA-TGYCVKTLT----GHREWVRQIKVSPDGTLLASCS 251 (406)
Q Consensus 192 ~v~~~~~~p~~~~--l~s~s-------------~d~~i~iwd~~-~~~~~~~~~----~~~~~v~~l~~~~~~~~l~s~~ 251 (406)
...+++|+|+|++ +++++ .++++.+|++. ++.....+. .+...+..++|+|+|++++++.
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 3456889999994 45553 68999999997 465544443 2456789999999999888766
Q ss_pred C-CCeEEEEeCC-Cccce--eEEe--cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC-CCcEEEEECC--
Q psy226 252 N-DHTARVWSLA-TKETK--AELR--GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR-DKTIKLWDVG-- 322 (406)
Q Consensus 252 ~-d~~v~vwd~~-~~~~~--~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~~i~lwd~~-- 322 (406)
. ++.|++||+. +++.. ..+. .|...+..++|+| +|.++++++. ++.|.+|++.
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~sp------------------dg~~l~v~~~~~~~v~v~~~~~~ 225 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHP------------------TGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECT------------------TSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECC------------------CCCEEEEEECCCCeEEEEEEeCC
Confidence 4 6899999997 55432 2232 2355688889988 4677777764 6899999764
Q ss_pred CCeEEE---EEe-------CCCc------CEEEEE-EcCCCCEEEEEeCC-C-----eEEEEeCC-CCccce---eeccc
Q psy226 323 SGSLLF---TLI-------GHDN------WVRGVT-FHPGGKYLVSCGDD-K-----TLRVWDTA-NKRNMK---TLEAH 375 (406)
Q Consensus 323 ~~~~~~---~~~-------~h~~------~v~~l~-~s~~g~~l~sgs~d-~-----~i~vwd~~-~~~~~~---~l~~h 375 (406)
+++... .+. +|.. .+..++ |+|+|++|++++.+ . +|.+|++. +++... .+..+
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 565432 221 1222 588999 99999998876543 2 89999986 555432 13334
Q ss_pred cceEEEEEEeC---CCCEEEEeeCC-CeEEEeec
Q psy226 376 SHFVTSLDFHR---AHPYVVTGSVD-KTVKVWEC 405 (406)
Q Consensus 376 ~~~v~~l~~~~---~~~~l~sgs~D-g~v~iw~~ 405 (406)
...+..++|+| ++++|++++.+ +.|.+|+.
T Consensus 306 ~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~ 339 (365)
T 1jof_A 306 TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRW 339 (365)
T ss_dssp SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEE
T ss_pred CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEE
Confidence 44567889999 89999988764 89999985
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=5.6e-23 Score=203.41 Aligned_cols=230 Identities=13% Similarity=0.084 Sum_probs=175.2
Q ss_pred ccCeeeEEECCCCCEEEEEeC-CCcEEEEeCCCCeEEEEEecCC-cceEEEEEecCCCEEEEEeC---CCcEEEEEcCC-
Q psy226 148 LDSVQDIAFDQSGKLLVSCSA-DMSLKLWDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASR---DKTIKMWEVAT- 221 (406)
Q Consensus 148 ~~~V~~l~~~~~g~~l~sgs~-d~~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~---d~~i~iwd~~~- 221 (406)
..+|.+++|+|||+.|++++. ||+++||++.+++.. .+..|. ..+.+++|+|+ +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTS 98 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETT
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEecc
Confidence 457999999999999999887 999999999776654 444444 68999999999 77777765 55566765533
Q ss_pred --CeEEEEeecCCccEEEEEECCCCC--EEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCC
Q psy226 222 --GYCVKTLTGHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGR 297 (406)
Q Consensus 222 --~~~~~~~~~~~~~v~~l~~~~~~~--~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 297 (406)
+... .+.... .+...+|+|+|+ .+++++.|+ +.+||+.+++.......+. .+++|+|
T Consensus 99 ~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~~---~~~~~sp------------- 159 (582)
T 3o4h_A 99 RPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLPG---FGFVSDI------------- 159 (582)
T ss_dssp STTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEESS---CEEEEEE-------------
T ss_pred CCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCCC---ceEEECC-------------
Confidence 2222 333222 233557777775 445555554 5599998876554443333 6777877
Q ss_pred CCCCCCCCEEEEEeCC----CcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCC--eEEEEeCCCCcccee
Q psy226 298 PPGQGGGPYLATGSRD----KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK--TLRVWDTANKRNMKT 371 (406)
Q Consensus 298 ~~~~~~~~~l~s~~~d----~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~--~i~vwd~~~~~~~~~ 371 (406)
+|.++++++.| +.|++||+.+++.. .+.+|...+..++|||||++|++++.++ .|++||+.+++.. .
T Consensus 160 -----DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~ 232 (582)
T 3o4h_A 160 -----RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-D 232 (582)
T ss_dssp -----ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-E
T ss_pred -----CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E
Confidence 57889988877 78999999888754 6778888899999999999999888888 9999999988776 6
Q ss_pred eccccceEEEEE--------EeCCCCEEEEeeCCCeEEEeec
Q psy226 372 LEAHSHFVTSLD--------FHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 372 l~~h~~~v~~l~--------~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+..|...+..++ |+|+|.++++++.||++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 233 LELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 677766666667 9999999999999999999974
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.89 E-value=3.4e-22 Score=203.25 Aligned_cols=265 Identities=16% Similarity=0.197 Sum_probs=187.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccC-----eeeEEECCCCCEEEEEeCC---------CcEE
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS-----VQDIAFDQSGKLLVSCSAD---------MSLK 173 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~-----V~~l~~~~~g~~l~sgs~d---------~~i~ 173 (406)
....+.|+|++.+++++ ||+|++||+.+++....+.+|... ..++.|||||++|+.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 35578999999999987 999999999999988888887643 2448899999999998876 5567
Q ss_pred EEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEE-eecC--------CccE---------
Q psy226 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKT-LTGH--------REWV--------- 235 (406)
Q Consensus 174 vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~-~~~~--------~~~v--------- 235 (406)
+||+.++++. .+..|...+...+|+|||+.|+.++ |+.|++||+.++...+. ..++ .++|
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 9999998754 4666778899999999999998874 68999999988765432 1222 2222
Q ss_pred EEEEECCCCCEEEEEeCCC------------------------------------eEEEEeCCC---cc--ceeEEe---
Q psy226 236 RQIKVSPDGTLLASCSNDH------------------------------------TARVWSLAT---KE--TKAELR--- 271 (406)
Q Consensus 236 ~~l~~~~~~~~l~s~~~d~------------------------------------~v~vwd~~~---~~--~~~~~~--- 271 (406)
..+.|||||+.||.++.|. .|++||+.+ +. ....+.
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 3489999999999876332 478888887 62 222333
Q ss_pred ---cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC----CCcEEEEECCCCe----EE--EEE--eCCCcC
Q psy226 272 ---GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR----DKTIKLWDVGSGS----LL--FTL--IGHDNW 336 (406)
Q Consensus 272 ---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~----d~~i~lwd~~~~~----~~--~~~--~~h~~~ 336 (406)
+|...+..++|+|+ |..++.... +..|++||+.+++ +. ..+ .+|..+
T Consensus 254 ~~~~~~~~~~~~~wspd------------------g~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~ 315 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQ------------------ERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGW 315 (740)
T ss_dssp HHHTSCEEEEEEEEEET------------------TEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSC
T ss_pred cCCCCCeEEEEEEEeCC------------------CeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCce
Confidence 37778889999984 554444332 3369999998886 32 122 457766
Q ss_pred EE-----EEEEcCCCCEEE-EEeCC---CeEEEEeCCCCccceeeccccceEEEEEEeCCCCEE-EEeeC
Q psy226 337 VR-----GVTFHPGGKYLV-SCGDD---KTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV-VTGSV 396 (406)
Q Consensus 337 v~-----~l~~s~~g~~l~-sgs~d---~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l-~sgs~ 396 (406)
|. ..+|+|||+.|+ ..+.+ ..|++||..+++.. .+....-.|..+.+ +++..| ++++.
T Consensus 316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNE 383 (740)
T ss_dssp SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESC
T ss_pred EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEec
Confidence 65 789999999877 66643 46888998876544 34333334544432 335554 44443
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=1.7e-22 Score=204.99 Aligned_cols=274 Identities=10% Similarity=0.068 Sum_probs=192.9
Q ss_pred CeEEEEEcCCCCEEEEEeC---------CCcEEEEEcCCCcEE--EEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 108 PVIKVIFHPVFSLMASCSE---------DATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~---------dg~v~vwd~~~~~~~--~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
.|.+++|||||++||+++. +++|++||+.+++.. ..+ ...+.+++|+|||+.|+.++ |+.|++||
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~ 136 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQ 136 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEES
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEe
Confidence 4899999999999998876 799999999998762 122 25689999999999999885 78999999
Q ss_pred CCCCeEEEEE-ecCCcce-----------------EEEEEecCCCEEEEEeCCC--------------------------
Q psy226 177 MSTYQCLKTM-QGHDHNV-----------------TGVAFLPNSDFVLSASRDK-------------------------- 212 (406)
Q Consensus 177 ~~~~~~~~~~-~~h~~~v-----------------~~~~~~p~~~~l~s~s~d~-------------------------- 212 (406)
+.+++..... .++...| .+++|+|||++|++++.|.
T Consensus 137 ~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 137 RPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp STTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCC
Confidence 9887765432 2332222 4899999999999987652
Q ss_pred --------cEEEEEcCCCeEE---E-----EeecCCccEEEEEECCCCCEEEEEeCC----CeEEEEe----CCCcccee
Q psy226 213 --------TIKMWEVATGYCV---K-----TLTGHREWVRQIKVSPDGTLLASCSND----HTARVWS----LATKETKA 268 (406)
Q Consensus 213 --------~i~iwd~~~~~~~---~-----~~~~~~~~v~~l~~~~~~~~l~s~~~d----~~v~vwd----~~~~~~~~ 268 (406)
.|++||+.++... . .+.+|...+..++|+||++++++.... ..|.+|| +.+++...
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 7889999887642 1 234688889999999998877775433 2488899 76665544
Q ss_pred EE----ecCCceEE-----EEEeCCCCCccccccccCCCCCCCCCCEEE--EEeCCC--cEEEEECCCCeEEEEEeCCCc
Q psy226 269 EL----RGHDHTVE-----CVAWAPGVASESISEAAGRPPGQGGGPYLA--TGSRDK--TIKLWDVGSGSLLFTLIGHDN 335 (406)
Q Consensus 269 ~~----~~~~~~v~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--s~~~d~--~i~lwd~~~~~~~~~~~~h~~ 335 (406)
.+ .+|...+. .+.|+|+ |..++ ++..++ .|.+||+.+++ ...+..+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~spd------------------g~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~ 357 (719)
T 1z68_A 297 TQEHIEESRTGWAGGFFVSTPVFSYD------------------AISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKW 357 (719)
T ss_dssp GGEEEEECSSSCSSSSSCCCCEECTT------------------SSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSS
T ss_pred EEecccccCCceEccccCCccEECCC------------------CCeEEEEEEccCCceEEEEEECCCCc-eEecccCce
Confidence 44 35555554 6677773 44333 344555 57778887766 445555666
Q ss_pred CEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCC--Cc-cceeec----cccceEEEEEEeCCCCEEEE-eeCC--CeE
Q psy226 336 WVRGVTFHPGGKYLVSCGDD-----KTLRVWDTAN--KR-NMKTLE----AHSHFVTSLDFHRAHPYVVT-GSVD--KTV 400 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d-----~~i~vwd~~~--~~-~~~~l~----~h~~~v~~l~~~~~~~~l~s-gs~D--g~v 400 (406)
.+..+.++ +++.|+..+.+ +.+++|.+.. +. ....+. +|...+..+.|+|++++++. ++.+ ..+
T Consensus 358 ~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~ 436 (719)
T 1z68_A 358 EAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPIS 436 (719)
T ss_dssp CEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEE
T ss_pred EEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeE
Confidence 67887777 77777666554 7888997653 32 123332 25566788999999987763 4433 356
Q ss_pred EEeec
Q psy226 401 KVWEC 405 (406)
Q Consensus 401 ~iw~~ 405 (406)
.+||.
T Consensus 437 ~l~d~ 441 (719)
T 1z68_A 437 TLHDG 441 (719)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 77764
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.89 E-value=3.3e-21 Score=193.55 Aligned_cols=282 Identities=14% Similarity=0.104 Sum_probs=207.5
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEE--eCCCcEEEEEcCCCcEEEEecccccCee---------eEEEC--CCCCE-EEEE
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASC--SEDATIRLWDYETGEYERALHGHLDSVQ---------DIAFD--QSGKL-LVSC 166 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latg--s~dg~v~vwd~~~~~~~~~~~~h~~~V~---------~l~~~--~~g~~-l~sg 166 (406)
.+.+|...|..++|+++.-++++. +.++...||....+...+.+..|...+. ...|+ |||+. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 467899999999999987777777 6688999999654544566776766666 66665 99998 7765
Q ss_pred eC-CCcEEEEeCC--C-CeEEEEEec-----CCcceEEEEEecCCCEEEEEeCC----------CcEEEEEcCC------
Q psy226 167 SA-DMSLKLWDMS--T-YQCLKTMQG-----HDHNVTGVAFLPNSDFVLSASRD----------KTIKMWEVAT------ 221 (406)
Q Consensus 167 s~-d~~i~vwd~~--~-~~~~~~~~~-----h~~~v~~~~~~p~~~~l~s~s~d----------~~i~iwd~~~------ 221 (406)
+. +..|.+|++. + ++ ...+.. |...+.+++|+|+|+.|++++.| ..|++||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 176 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADR 176 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCG
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccC
Confidence 54 4566666765 2 33 445555 66788999999999999988877 5899999987
Q ss_pred CeEEEEee-cCCccEEEEEECCCCCEEEEEeCC--------CeEEEEeCC-Cc---cceeEEecCCceEEEEEeCCCCCc
Q psy226 222 GYCVKTLT-GHREWVRQIKVSPDGTLLASCSND--------HTARVWSLA-TK---ETKAELRGHDHTVECVAWAPGVAS 288 (406)
Q Consensus 222 ~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~d--------~~v~vwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~ 288 (406)
+.. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ .......+|...+..+.|+|+
T Consensus 177 ~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spd--- 252 (662)
T 3azo_A 177 SAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPD--- 252 (662)
T ss_dssp GGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTT---
T ss_pred Cce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCC---
Confidence 543 4555 666788889999999999988755 379999998 45 344444456778899999984
Q ss_pred cccccccCCCCCCCCCCEEEEEeCCC--cEEEEECCCCeEEEEEeCCCcC--------EEEEEEcCCCCEEEEEeCCCeE
Q psy226 289 ESISEAAGRPPGQGGGPYLATGSRDK--TIKLWDVGSGSLLFTLIGHDNW--------VRGVTFHPGGKYLVSCGDDKTL 358 (406)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~l~s~~~d~--~i~lwd~~~~~~~~~~~~h~~~--------v~~l~~s~~g~~l~sgs~d~~i 358 (406)
|.+++++..++ .|.+||+.+++......++... +..++|+|+++++++++. +.+
T Consensus 253 ---------------g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~ 316 (662)
T 3azo_A 253 ---------------GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAA 316 (662)
T ss_dssp ---------------SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSC
T ss_pred ---------------CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-Ccc
Confidence 56778888888 6777777677654433333322 567899999999999998 999
Q ss_pred EEE--eCCCCccceeeccccceEEEE-EEeCCCCEEEEeeCCCeEEEee
Q psy226 359 RVW--DTANKRNMKTLEAHSHFVTSL-DFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 359 ~vw--d~~~~~~~~~l~~h~~~v~~l-~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
+|| |..+++ ++.+..|...+..+ +++.+.-++++++.+....+|.
T Consensus 317 ~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 317 VLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp EEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred EEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 999 555554 67777787778877 6665555566667776555554
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.89 E-value=1.1e-20 Score=175.82 Aligned_cols=243 Identities=14% Similarity=0.147 Sum_probs=174.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCcEEEEeccc-ccCeeeEEECCCCCE--EEEEe-------------
Q psy226 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYE-TGEYERALHGH-LDSVQDIAFDQSGKL--LVSCS------------- 167 (406)
Q Consensus 105 h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~-~~~~~~~~~~h-~~~V~~l~~~~~g~~--l~sgs------------- 167 (406)
....+..++|+|++++|++++.+ .|.+||+. +++........ .+.+.+++|+|+|++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 33467889999999999999988 99999997 78765433211 134667999999994 55553
Q ss_pred CCCcEEEEeCC-CCeEEEEEe----cCCcceEEEEEecCCCEEEEEeC-CCcEEEEEcC-CCeEE--EEee--cCCccEE
Q psy226 168 ADMSLKLWDMS-TYQCLKTMQ----GHDHNVTGVAFLPNSDFVLSASR-DKTIKMWEVA-TGYCV--KTLT--GHREWVR 236 (406)
Q Consensus 168 ~d~~i~vwd~~-~~~~~~~~~----~h~~~v~~~~~~p~~~~l~s~s~-d~~i~iwd~~-~~~~~--~~~~--~~~~~v~ 236 (406)
.++++.+|++. +++....+. .+...+.+++|+|+|++|++++. ++.|++||+. ++... ..+. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 465544443 24567899999999998887664 6799999998 67543 2333 2356689
Q ss_pred EEEECCCCCEEEEEeC-CCeEEEEeCC--Cccce---eEEe-------cCCc------eEEEEE-eCCCCCccccccccC
Q psy226 237 QIKVSPDGTLLASCSN-DHTARVWSLA--TKETK---AELR-------GHDH------TVECVA-WAPGVASESISEAAG 296 (406)
Q Consensus 237 ~l~~~~~~~~l~s~~~-d~~v~vwd~~--~~~~~---~~~~-------~~~~------~v~~~~-~~~~~~~~~~~~~~~ 296 (406)
.++|+|+|+++++++. ++.|.+|++. +++.. ..+. +|.. .+..++ |+|
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp------------ 264 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF------------ 264 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT------------
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC------------
Confidence 9999999999887774 7899999875 33321 1121 1121 477888 887
Q ss_pred CCCCCCCCCEEEEEeCC-C-----cEEEEECC-CCeEEE---EEeCCCcCEEEEEEcC---CCCEEEEEeCC-CeEEEEe
Q psy226 297 RPPGQGGGPYLATGSRD-K-----TIKLWDVG-SGSLLF---TLIGHDNWVRGVTFHP---GGKYLVSCGDD-KTLRVWD 362 (406)
Q Consensus 297 ~~~~~~~~~~l~s~~~d-~-----~i~lwd~~-~~~~~~---~~~~h~~~v~~l~~s~---~g~~l~sgs~d-~~i~vwd 362 (406)
+|++|++++.+ + .|.+|++. +++... ....+...+..++|+| +|++|++++.+ +.|.+|+
T Consensus 265 ------dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 265 ------SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338 (365)
T ss_dssp ------TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEE
T ss_pred ------CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEE
Confidence 46777766543 2 89999986 566543 2334555567889999 89999988864 8999999
Q ss_pred CCCC
Q psy226 363 TANK 366 (406)
Q Consensus 363 ~~~~ 366 (406)
+...
T Consensus 339 ~~~~ 342 (365)
T 1jof_A 339 WKDE 342 (365)
T ss_dssp EETT
T ss_pred Echh
Confidence 8654
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=3.1e-21 Score=180.95 Aligned_cols=272 Identities=14% Similarity=0.112 Sum_probs=188.7
Q ss_pred eEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEE
Q psy226 109 VIKVIFHPVFSLMASCSED---ATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKT 185 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~d---g~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~ 185 (406)
+..++|+|+|+.|+.++.. ..|.+||..+++......++......+.|+|+|+.|+.++.++.|.+||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 6778999999998876543 3688889998876554443433344588999999999999999999999998876655
Q ss_pred EecCCcceEE-------------------EEEecCCCEEEEE-----eCCCcEEEEEcCCCeEEEEeecCCccEEEEEEC
Q psy226 186 MQGHDHNVTG-------------------VAFLPNSDFVLSA-----SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241 (406)
Q Consensus 186 ~~~h~~~v~~-------------------~~~~p~~~~l~s~-----s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~ 241 (406)
...+...... +.|+|+++.++.+ ..+..|.+||+.++...... .+...+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceEC
Confidence 5544432222 3456666655543 35678999999988765444 566778999999
Q ss_pred C-CCCEEEEEeCC------CeEEEEeCCCccceeEEecC--CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC
Q psy226 242 P-DGTLLASCSND------HTARVWSLATKETKAELRGH--DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR 312 (406)
Q Consensus 242 ~-~~~~l~s~~~d------~~v~vwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 312 (406)
| ++..|+.++.+ ..|.+||+....... +..+ ...+..+.|+|+ |.+|+.++.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spd------------------g~~l~~~~~ 257 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPD------------------GSAMAYVSY 257 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTT------------------SSCEEEEEE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCC------------------CCEEEEEec
Confidence 9 78877776654 358888886554332 2222 335778899884 555665544
Q ss_pred C-----CcEEEEECCCCeEEEEEeCCCcCEEEEEEcC-CCCEEEEEe----------------CCCeEEEEeCCCCccce
Q psy226 313 D-----KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCG----------------DDKTLRVWDTANKRNMK 370 (406)
Q Consensus 313 d-----~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~-~g~~l~sgs----------------~d~~i~vwd~~~~~~~~ 370 (406)
+ +.|++||+.+++...... ... .. +.|+| +|+++++++ .++.|++||..+++. .
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~ 333 (396)
T 3c5m_A 258 FKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-Q 333 (396)
T ss_dssp ETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-C
T ss_pred CCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-E
Confidence 3 449999998886543322 112 23 89999 999888765 347899999987764 3
Q ss_pred eeccccc-----------eEEEEEEeCCCCEEEEeeC-CCeEEEee
Q psy226 371 TLEAHSH-----------FVTSLDFHRAHPYVVTGSV-DKTVKVWE 404 (406)
Q Consensus 371 ~l~~h~~-----------~v~~l~~~~~~~~l~sgs~-Dg~v~iw~ 404 (406)
.+..+.. .+..++|+|+++.|+.++. ++...+|.
T Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 334 KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 4544443 2566789999998877664 56666664
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.88 E-value=2.4e-19 Score=164.37 Aligned_cols=247 Identities=16% Similarity=0.155 Sum_probs=192.1
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC------------------------CcEEEEEcCCCcEEEEec-ccccCeeeEEECCCC
Q psy226 106 RSPVIKVIFHPVFSLMASCSED------------------------ATIRLWDYETGEYERALH-GHLDSVQDIAFDQSG 160 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~d------------------------g~v~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~g 160 (406)
-+.|.+|+++|+++++++.+.+ ++|.+||..++++...+. ++......++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999998887 579999999998876654 455678999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCe-EEEEE---------ecCCcceEEEEEec-CCCEEEEEe-CCCcEEEEEcCCCeEEEEe
Q psy226 161 KLLVSCSADMSLKLWDMSTYQ-CLKTM---------QGHDHNVTGVAFLP-NSDFVLSAS-RDKTIKMWEVATGYCVKTL 228 (406)
Q Consensus 161 ~~l~sgs~d~~i~vwd~~~~~-~~~~~---------~~h~~~v~~~~~~p-~~~~l~s~s-~d~~i~iwd~~~~~~~~~~ 228 (406)
+++++.+.++.|++||..... .+..+ .++.....+++++| ++.++++.+ .++.|++|| .++..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888889999999986542 34444 23444688999999 788888876 689999999 567776666
Q ss_pred ec----------CCccEEEEEECCC-CCEEEEEeCCCeEEEEeCCCccceeEEe--cCCceEEEEEeCCCCCcccccccc
Q psy226 229 TG----------HREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETKAELR--GHDHTVECVAWAPGVASESISEAA 295 (406)
Q Consensus 229 ~~----------~~~~v~~l~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~ 295 (406)
.. +-.....++++|+ +.++++...++.|++||..+++.+..+. .+...+..+++.|+.....
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~----- 256 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAV----- 256 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEE-----
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEe-----
Confidence 42 2234789999998 7788888889999999998777766663 3556677888887211100
Q ss_pred CCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe---CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Q psy226 296 GRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI---GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365 (406)
Q Consensus 296 ~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~---~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~ 365 (406)
++...++.+.+..|++||..+++.+..+. ++...+.+|+++|+|..+++...+++|++|++..
T Consensus 257 -------~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 257 -------NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp -------ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred -------CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 12233344456689999999999988873 6777899999999998888888999999999754
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.87 E-value=7.9e-19 Score=157.44 Aligned_cols=241 Identities=13% Similarity=0.247 Sum_probs=182.5
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec------ccccCeeeEEE-CCCCCEEEEEeC-CCcEEEE
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH------GHLDSVQDIAF-DQSGKLLVSCSA-DMSLKLW 175 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~------~h~~~V~~l~~-~~~g~~l~sgs~-d~~i~vw 175 (406)
+|...+.+++++|++.++++...++.|.+||.. ++....+. +|...+.++++ .+++.++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 456778999999999999999999999999987 55555543 34567889999 577777666643 8899999
Q ss_pred eCCCCeEEEEEec-CCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEee--cCCccEEEEEECCCCCEEEEEeC
Q psy226 176 DMSTYQCLKTMQG-HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT--GHREWVRQIKVSPDGTLLASCSN 252 (406)
Q Consensus 176 d~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~ 252 (406)
| .+++.+..+.. +...+.++++.|+++++++...++.|.+||. .+..+..+. ++...+..++++|+|+++++...
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 9 55666666543 3456899999999998888778899999996 455555554 34456899999999998888888
Q ss_pred CCeEEEEeCCCccceeEEecC--CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC-cEEEEECCCCeEEEE
Q psy226 253 DHTARVWSLATKETKAELRGH--DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK-TIKLWDVGSGSLLFT 329 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-~i~lwd~~~~~~~~~ 329 (406)
++.|++||.. +..+..+..+ ...+..+++.| +|.++++...++ .|.+||. +++.+..
T Consensus 184 ~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~------------------~G~l~v~~~~~~~~i~~~~~-~g~~~~~ 243 (286)
T 1q7f_A 184 AHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINS------------------NGEILIADNHNNFNLTIFTQ-DGQLISA 243 (286)
T ss_dssp GTEEEEEETT-CCEEEEESCTTTSCSEEEEEECT------------------TCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred CCEEEEEcCC-CCEEEEEccCCccCCCcEEEECC------------------CCCEEEEeCCCCEEEEEECC-CCCEEEE
Confidence 9999999974 3444444333 24567777776 466777777775 9999995 5666666
Q ss_pred EeCCC--cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc
Q psy226 330 LIGHD--NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368 (406)
Q Consensus 330 ~~~h~--~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~ 368 (406)
+..+. ..+.+++++|+|+++++ +.|++|++|++.....
T Consensus 244 ~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 244 LESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred EcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 65543 34789999999987777 6799999999865433
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=2.1e-19 Score=166.92 Aligned_cols=257 Identities=12% Similarity=0.178 Sum_probs=182.6
Q ss_pred CCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEecC------
Q psy226 126 EDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS----------ADMSLKLWDMSTYQCLKTMQGH------ 189 (406)
Q Consensus 126 ~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs----------~d~~i~vwd~~~~~~~~~~~~h------ 189 (406)
.|++|.+||..+++....+..+..+ .++|+|+|++|++++ .+++|.+||..+++.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999988888776655 899999999999886 3678999999998888777643
Q ss_pred CcceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEE-eecCCccEEEEEECCCC-CEEEEEeCCCeEEEEeCCC-c
Q psy226 190 DHNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKT-LTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLAT-K 264 (406)
Q Consensus 190 ~~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~s~~~d~~v~vwd~~~-~ 264 (406)
......++|+|+|++|++++. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+++.+.||.+.+|++.. +
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~--~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG--CWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT--EEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC--cceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 234567999999999998864 68999999999988777 54322 1224566765 6677888888888887754 2
Q ss_pred cceeE--------------------------EecCCceEEEEEeCCCCCcc--cc-------ccccCCC------CCCCC
Q psy226 265 ETKAE--------------------------LRGHDHTVECVAWAPGVASE--SI-------SEAAGRP------PGQGG 303 (406)
Q Consensus 265 ~~~~~--------------------------~~~~~~~v~~~~~~~~~~~~--~~-------~~~~~~~------~~~~~ 303 (406)
+.... +..+...+..+.+.++.... .. ......+ ...++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 22100 01112233333333221000 00 0000000 11223
Q ss_pred CCEEEEEeC-----------CCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--ccce
Q psy226 304 GPYLATGSR-----------DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK--RNMK 370 (406)
Q Consensus 304 ~~~l~s~~~-----------d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~--~~~~ 370 (406)
+..++++.. .+.|.+||+.+++.+.++..+. +.+++|+|+|++|++++. +.|.|||..++ +.++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLR 341 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeE
Confidence 445554432 3479999999999999998877 899999999999998887 99999999999 8888
Q ss_pred eeccccceEEEEEEeCCCC
Q psy226 371 TLEAHSHFVTSLDFHRAHP 389 (406)
Q Consensus 371 ~l~~h~~~v~~l~~~~~~~ 389 (406)
++..+......++++|+|.
T Consensus 342 ~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 342 TIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EETTSCSSEEEEEECCCSC
T ss_pred EeccCCCCcEEEEecCCCC
Confidence 8866777788999999985
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=1.1e-18 Score=156.61 Aligned_cols=236 Identities=13% Similarity=0.241 Sum_probs=179.5
Q ss_pred ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe------cCCcceEEEEEe-cCCCEEEEEeC-CCcEEEE
Q psy226 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ------GHDHNVTGVAFL-PNSDFVLSASR-DKTIKMW 217 (406)
Q Consensus 146 ~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~-p~~~~l~s~s~-d~~i~iw 217 (406)
++...+.+++++++|+++++.+.++.|.+||.. ++.+..+. ++...+.++++. +++.++++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 456678999999999988888889999999987 55555553 234568899995 56665555533 8899999
Q ss_pred EcCCCeEEEEee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEe--cCCceEEEEEeCCCCCccccccc
Q psy226 218 EVATGYCVKTLT-GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR--GHDHTVECVAWAPGVASESISEA 294 (406)
Q Consensus 218 d~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~ 294 (406)
| .++..+..+. .+...+..++++|+|+++++...++.|.+||.. +.....+. .+...+..+++.|
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~---------- 173 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVND---------- 173 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECS----------
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECC----------
Confidence 9 5677666664 344578899999999988888889999999964 33344443 3344577888876
Q ss_pred cCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC--CcCEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCcccee
Q psy226 295 AGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH--DNWVRGVTFHPGGKYLVSCGDDK-TLRVWDTANKRNMKT 371 (406)
Q Consensus 295 ~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h--~~~v~~l~~s~~g~~l~sgs~d~-~i~vwd~~~~~~~~~ 371 (406)
++.++++.+.++.|++||. .++.+..+..+ ...+.+++++|+|+++++...++ .|.+||. +++.+..
T Consensus 174 --------~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~ 243 (286)
T 1q7f_A 174 --------KQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISA 243 (286)
T ss_dssp --------SSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEE
T ss_pred --------CCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEE
Confidence 3567777778899999997 55666666543 36789999999999988888886 9999995 4666666
Q ss_pred eccccc--eEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 372 LEAHSH--FVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 372 l~~h~~--~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+..+.. .+.+++++|++.++++ +.|++|++|++
T Consensus 244 ~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~ 278 (286)
T 1q7f_A 244 LESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRY 278 (286)
T ss_dssp EEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEEC
T ss_pred EcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEc
Confidence 655433 4789999999987777 57999999986
No 170
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.9e-19 Score=165.62 Aligned_cols=234 Identities=14% Similarity=0.039 Sum_probs=168.9
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCcEEEEeccc------ccCeeeEEECCCCCEEEEEeCC-----------
Q psy226 108 PVIKVIFHPVFSLM-ASCSEDATIRLWDYETGEYERALHGH------LDSVQDIAFDQSGKLLVSCSAD----------- 169 (406)
Q Consensus 108 ~V~~v~~~p~~~~l-atgs~dg~v~vwd~~~~~~~~~~~~h------~~~V~~l~~~~~g~~l~sgs~d----------- 169 (406)
.+..++|+|+++.+ +++..++.|.+||..+++....+..+ ...+.+++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 57789999999865 46667899999999999887766532 2348899999999999998865
Q ss_pred -CcEEEEeCCCCe---EEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCc------------
Q psy226 170 -MSLKLWDMSTYQ---CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE------------ 233 (406)
Q Consensus 170 -~~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~------------ 233 (406)
+.|.+||+.+++ .+..+.. ...+.+++|+|+++ +++++. .|.+||..++..+..+..+..
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCcccee
Confidence 899999998743 2334433 34688999999999 665544 499999999988777654320
Q ss_pred ------------cEEEEEECCCCCE-----------EEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCC-CCCcc
Q psy226 234 ------------WVRQIKVSPDGTL-----------LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASE 289 (406)
Q Consensus 234 ------------~v~~l~~~~~~~~-----------l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~ 289 (406)
....+++++++.. +.....++.+++|++. .+...+..++++| +
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~sp~d---- 266 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA---------DLTELYFTGLRSPKD---- 266 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE---------ECSSCEEEEEECSSC----
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc---------cCCCcceeeEecCCC----
Confidence 2344666655421 1122234445554432 2445567777876 4
Q ss_pred ccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccc
Q psy226 290 SISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM 369 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~ 369 (406)
+.+++++ ++.|.+||+.+++.+..+... ..+.+++|+|+|++|++++.++.|++||..+++.+
T Consensus 267 --------------g~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 267 --------------PNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp --------------TTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred --------------CCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEecccccee
Confidence 5567777 889999999999988776543 34678999999999988888999999999998877
Q ss_pred eeeccc
Q psy226 370 KTLEAH 375 (406)
Q Consensus 370 ~~l~~h 375 (406)
..+...
T Consensus 330 ~~~~~~ 335 (349)
T 1jmx_B 330 KNIKLP 335 (349)
T ss_dssp EEEECS
T ss_pred eeeecC
Confidence 776543
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=3.7e-19 Score=164.05 Aligned_cols=256 Identities=10% Similarity=0.109 Sum_probs=180.3
Q ss_pred CeEEEEEcCCCCEEEEEe---------CCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCC---C--cEE
Q psy226 108 PVIKVIFHPVFSLMASCS---------EDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD---M--SLK 173 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs---------~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d---~--~i~ 173 (406)
.+...++ +|+.++... .++.|.+||+.+++... + ..+..+.|+|+|+.|+.++.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 3556667 788776542 36789999999887543 3 568899999999999887754 3 477
Q ss_pred EEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCC---------------------------CcEEEEEcCCCeEEE
Q psy226 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD---------------------------KTIKMWEVATGYCVK 226 (406)
Q Consensus 174 vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---------------------------~~i~iwd~~~~~~~~ 226 (406)
+||+.+++.......+ . +..++|+|+++.|+.++.+ ..|.+||+.++..+.
T Consensus 89 ~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 8888887765544433 3 9999999999988887642 578999999887745
Q ss_pred EeecCCccEEEEEECCCCCEEEEEeCCC-------eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCC
Q psy226 227 TLTGHREWVRQIKVSPDGTLLASCSNDH-------TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPP 299 (406)
Q Consensus 227 ~~~~~~~~v~~l~~~~~~~~l~s~~~d~-------~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 299 (406)
.+.. . .+..++|+|+| +++++..++ ...+|.+.+++ ...+..+ ..+..+ +|
T Consensus 167 ~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--sp--------------- 224 (347)
T 2gop_A 167 EFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DS--------------- 224 (347)
T ss_dssp EEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EE---------------
T ss_pred eecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CC---------------
Confidence 5555 3 78899999999 777776552 34555444333 2333333 333222 44
Q ss_pred CCCCCCEEEEEeCC--------CcEEEEECCCCeEEEEEeCCCcCEEE-EEEcCCCCEEEEEeCCCeEEEEeCCCCccce
Q psy226 300 GQGGGPYLATGSRD--------KTIKLWDVGSGSLLFTLIGHDNWVRG-VTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370 (406)
Q Consensus 300 ~~~~~~~l~s~~~d--------~~i~lwd~~~~~~~~~~~~h~~~v~~-l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~ 370 (406)
+|.+++.++.+ ..|.+|| +++......+|...+.. +.|+ +| ++++++.++.++|| +.+++. .
T Consensus 225 ---dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~ 295 (347)
T 2gop_A 225 ---DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-K 295 (347)
T ss_dssp ---CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-E
T ss_pred ---CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-E
Confidence 46667666644 3688888 56654444556777886 9999 88 88999999999999 875554 3
Q ss_pred eeccccceEEEEEEeCCCCEEEEeeCCCeE-EEeec
Q psy226 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTV-KVWEC 405 (406)
Q Consensus 371 ~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v-~iw~~ 405 (406)
.+..+...|.+++|+| .++++++.++.. .+|.+
T Consensus 296 ~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 296 PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 4444577899999999 677777777765 77764
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=2.8e-19 Score=164.00 Aligned_cols=239 Identities=10% Similarity=0.100 Sum_probs=185.8
Q ss_pred ccCeeeEEECCCCCEEEEEeCC------------------------CcEEEEeCCCCeEEEEEe-cCCcceEEEEEecCC
Q psy226 148 LDSVQDIAFDQSGKLLVSCSAD------------------------MSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNS 202 (406)
Q Consensus 148 ~~~V~~l~~~~~g~~l~sgs~d------------------------~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~p~~ 202 (406)
.+.+.+|+++++|+++++.+.+ ++|.+||..+++.+..+. ++-....+++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3568999999999999888877 479999998888776554 344578899999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCe-EEEEe---------ecCCccEEEEEECC-CCCEEEEEe-CCCeEEEEeCCCccceeEE
Q psy226 203 DFVLSASRDKTIKMWEVATGY-CVKTL---------TGHREWVRQIKVSP-DGTLLASCS-NDHTARVWSLATKETKAEL 270 (406)
Q Consensus 203 ~~l~s~s~d~~i~iwd~~~~~-~~~~~---------~~~~~~v~~l~~~~-~~~~l~s~~-~d~~v~vwd~~~~~~~~~~ 270 (406)
+++++.+.++.|++||..... .+..+ .++......++++| +|.++++.+ .++.|++||. .+.....+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEe
Confidence 988888889999999975442 44444 23445688999999 888888886 6999999994 44444444
Q ss_pred ec----------CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCEE
Q psy226 271 RG----------HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVR 338 (406)
Q Consensus 271 ~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~--~h~~~v~ 338 (406)
.. +......+++.|+ .+.++++...++.|++||..+++.+..+. .+...+.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~-----------------~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~ 244 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPH-----------------LDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVF 244 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETT-----------------TTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEE
T ss_pred ccCCCCCCCCCcccCCCcEEEEECC-----------------CCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcc
Confidence 32 1123667777762 26677788888999999999899888874 4567789
Q ss_pred EEEEcCCCCEEEEE-------eCCCeEEEEeCCCCccceeec---cccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 339 GVTFHPGGKYLVSC-------GDDKTLRVWDTANKRNMKTLE---AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 339 ~l~~s~~g~~l~sg-------s~d~~i~vwd~~~~~~~~~l~---~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+++|+| +..+++. +.+.+|++||..+++.+..+. .+...+..|+++|+|.++++...++.|++|++
T Consensus 245 ~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 245 AISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred eeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 999999 4444433 345589999999998888873 56667899999999988999999999999985
No 173
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=99.86 E-value=4.2e-22 Score=137.04 Aligned_cols=80 Identities=71% Similarity=1.049 Sum_probs=68.3
Q ss_pred CCCChhhHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCh--hhhhhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q psy226 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPA--EVEKKYSGLLEKKWTSVIRLQKKVIELESKLSEAEKEYV 78 (406)
Q Consensus 1 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 78 (406)
|+||+||++|||++|++||..+++.+++++|+.+++++. +...+|.|+|||||++++|||||+++||+++.+.+.+..
T Consensus 3 miLt~rQ~eEL~kaI~~YL~~~~~~~~~~alr~e~~~~~~~~~~~ky~gLLEKKWTSViRLQKKImdLE~~~~~l~~el~ 82 (88)
T 1uuj_A 3 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQKKVMELESKLNEAKEEFT 82 (88)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCCCCHHHHHHHTTHHHHHHTCHHHHHHHHHHHHHHHHHTTC---
T ss_pred CCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHhcCCCCchhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987653 334589999999999999999999999999988877765
Q ss_pred hC
Q psy226 79 EG 80 (406)
Q Consensus 79 ~~ 80 (406)
.+
T Consensus 83 ~~ 84 (88)
T 1uuj_A 83 SG 84 (88)
T ss_dssp --
T ss_pred hc
Confidence 43
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=4.8e-19 Score=162.43 Aligned_cols=267 Identities=9% Similarity=0.058 Sum_probs=194.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
..|.+++|+|++..++..+.++.++.| .++....+..+...+.+++|+++|++++++..++.|.+||..+++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 346778899998888877889999999 34555566677777899999999998888888999999999887765544
Q ss_pred ecCCcceEEEEEecCCCEEEEEeCC----CcEEEEEcCCCeEEEEee--cCCccEEEEEECCCCCEEEEEeC------CC
Q psy226 187 QGHDHNVTGVAFLPNSDFVLSASRD----KTIKMWEVATGYCVKTLT--GHREWVRQIKVSPDGTLLASCSN------DH 254 (406)
Q Consensus 187 ~~h~~~v~~~~~~p~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~------d~ 254 (406)
..+...+.+++++|+++++++...+ +.|.+||..++.....+. .+...+..++++|+|+++++... .+
T Consensus 83 ~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 83 VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 4566789999999999988877666 689999998876543333 24457899999999998887654 35
Q ss_pred eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEE-EEEeCCCcEEEEECCC-CeEEE----
Q psy226 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYL-ATGSRDKTIKLWDVGS-GSLLF---- 328 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~lwd~~~-~~~~~---- 328 (406)
.|..+|..+.+... +......+..++|+| ++.++ ++.+.++.|.+||+.+ +..+.
T Consensus 163 ~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~------------------dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 163 GVYYVSPDFRTVTP-IIQNISVANGIALST------------------DEKVLWVTETTANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp EEEEECTTSCCEEE-EEEEESSEEEEEECT------------------TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE
T ss_pred eEEEEeCCCCEEEE-eecCCCcccceEECC------------------CCCEEEEEeCCCCeEEEEEecCCCcCcccccc
Confidence 56666655433322 222233466778877 35544 4555678999999863 33221
Q ss_pred ----EEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccc------eEEEEEEeCCCCEEEEeeCC
Q psy226 329 ----TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH------FVTSLDFHRAHPYVVTGSVD 397 (406)
Q Consensus 329 ----~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~------~v~~l~~~~~~~~l~sgs~D 397 (406)
.+.++ ..+..++++++|+++++...++.|.+||. +++.+..+..+.. .+.+++|+|++..|..++.+
T Consensus 224 ~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 224 TIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred eEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 12222 46788999999998888888899999998 4666666654432 68899999998777655554
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.84 E-value=4.5e-19 Score=166.01 Aligned_cols=255 Identities=17% Similarity=0.134 Sum_probs=182.0
Q ss_pred EEEEcCCCcEEEEecccccCeee-----EEECCCCCEEEEEeC-CC--cEEEEeCCCCeEEEEEecCCcceEEEEEecCC
Q psy226 131 RLWDYETGEYERALHGHLDSVQD-----IAFDQSGKLLVSCSA-DM--SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202 (406)
Q Consensus 131 ~vwd~~~~~~~~~~~~h~~~V~~-----l~~~~~g~~l~sgs~-d~--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~ 202 (406)
..+|..++.....+..|...... .+|+|||++|+.++. ++ .|.+||+.+++......++...+.++.|+|++
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTS
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCC
Confidence 34577778777888877765555 889999999998887 66 48888999988777666676666678899999
Q ss_pred CEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEE--ECCCCCEEEEE----------------------eCCCeEEE
Q psy226 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK--VSPDGTLLASC----------------------SNDHTARV 258 (406)
Q Consensus 203 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~--~~~~~~~l~s~----------------------~~d~~v~v 258 (406)
+.|+.++.++.|++||+.++........+...+.... ++|++.+++.. ..+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 9999999999999999999988777776766664443 48999988743 24578999
Q ss_pred EeCCCccceeEEecCCceEEEEEeCC-CCCccccccccCCCCCCCCCCEEEEEeCC------CcEEEEECCCCeEEEEEe
Q psy226 259 WSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAGRPPGQGGGPYLATGSRD------KTIKLWDVGSGSLLFTLI 331 (406)
Q Consensus 259 wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~lwd~~~~~~~~~~~ 331 (406)
||+.+++.. .+..+...+..+.|+| + |..++..+.+ ..|.++|+..+.. ..+.
T Consensus 173 ~d~~~g~~~-~l~~~~~~~~~~~~sp~d------------------g~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~ 232 (388)
T 3pe7_A 173 VDLKTGEST-VILQENQWLGHPIYRPYD------------------DSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVK 232 (388)
T ss_dssp EETTTCCEE-EEEEESSCEEEEEEETTE------------------EEEEEEEECSCTTTSSCSEEEEETTSCCC-EESC
T ss_pred EECCCCceE-EeecCCccccccEECCCC------------------CCEEEEEEecCCCCCcceEEEEeCCCCce-EEee
Confidence 999887543 4445566678889988 4 4556655543 3788888765543 3444
Q ss_pred CCC--cCEEEEEEcCCCCEEEEEeC-C----CeEEEEeCCCCcc--ceeeccccceE---EEEEEeCCCCEEEEe-----
Q psy226 332 GHD--NWVRGVTFHPGGKYLVSCGD-D----KTLRVWDTANKRN--MKTLEAHSHFV---TSLDFHRAHPYVVTG----- 394 (406)
Q Consensus 332 ~h~--~~v~~l~~s~~g~~l~sgs~-d----~~i~vwd~~~~~~--~~~l~~h~~~v---~~l~~~~~~~~l~sg----- 394 (406)
.+. ..+...+|+|+|+.|+..+. + ..|++||+.+++. +..+..+.... ..++|+|+|+.|+..
T Consensus 233 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 312 (388)
T 3pe7_A 233 THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDS 312 (388)
T ss_dssp CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC--------
T ss_pred eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeecc
Confidence 444 35788999999997765443 2 2499999998764 22333321111 123799999988753
Q ss_pred ----eCCCeEEEeec
Q psy226 395 ----SVDKTVKVWEC 405 (406)
Q Consensus 395 ----s~Dg~v~iw~~ 405 (406)
..+..|.+||+
T Consensus 313 ~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 313 GYKIENDPFLYVFNM 327 (388)
T ss_dssp ----CCCCEEEEEET
T ss_pred ccccCCCCEEEEEec
Confidence 45678999986
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.84 E-value=9.8e-20 Score=185.17 Aligned_cols=234 Identities=10% Similarity=0.126 Sum_probs=169.6
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcc-----eEEEEEecCCCEEEEEeCC---------CcE
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN-----VTGVAFLPNSDFVLSASRD---------KTI 214 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~-----v~~~~~~p~~~~l~s~s~d---------~~i 214 (406)
....++.|+|+|.+++++ |++|++||+.++++...+.+|... ...+.|+|||++|+.++.+ +.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 346689999999999886 999999999999988788877643 2347899999999998876 556
Q ss_pred EEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEE-ecCCceE----------------
Q psy226 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL-RGHDHTV---------------- 277 (406)
Q Consensus 215 ~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~~~~v---------------- 277 (406)
.+||+.++... .+..|...+...+|||||+.||.+. |+.|++|++.++...... .++...+
T Consensus 95 ~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 95 DIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 79999998754 4667788899999999999999885 689999999876644321 1222212
Q ss_pred -EEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC------------------------------------CcEEEEE
Q psy226 278 -ECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD------------------------------------KTIKLWD 320 (406)
Q Consensus 278 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d------------------------------------~~i~lwd 320 (406)
..+.|+|+. ..|+.++.| ..|++||
T Consensus 173 ~~~~~wSpDg------------------~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d 234 (740)
T 4a5s_A 173 YSALWWSPNG------------------TFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVN 234 (740)
T ss_dssp SBCEEECTTS------------------SEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred CcceEECCCC------------------CEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEE
Confidence 247788853 334333211 1588899
Q ss_pred CCC---C---eEEEEEe------CCCcCEEEEEEcCCCCEEEEEe----CCCeEEEEeCCCCc----c--ceee--cccc
Q psy226 321 VGS---G---SLLFTLI------GHDNWVRGVTFHPGGKYLVSCG----DDKTLRVWDTANKR----N--MKTL--EAHS 376 (406)
Q Consensus 321 ~~~---~---~~~~~~~------~h~~~v~~l~~s~~g~~l~sgs----~d~~i~vwd~~~~~----~--~~~l--~~h~ 376 (406)
+.+ + +.. .+. +|...+..++|+|||+.++... .+..|++||..+++ + +..+ ..|.
T Consensus 235 ~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~ 313 (740)
T 4a5s_A 235 TDSLSSVTNATSI-QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTT 313 (740)
T ss_dssp TTSCCSSSCCCEE-EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSS
T ss_pred CCCCCCCCcceEE-EecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCC
Confidence 988 7 333 333 3888899999999999766543 23479999998876 2 2333 4455
Q ss_pred ceEE-----EEEEeCCCCEEE-Eee-CCC--eEEEeec
Q psy226 377 HFVT-----SLDFHRAHPYVV-TGS-VDK--TVKVWEC 405 (406)
Q Consensus 377 ~~v~-----~l~~~~~~~~l~-sgs-~Dg--~v~iw~~ 405 (406)
..|. ..+|+|||+.|+ ..+ .+| .|.+|+.
T Consensus 314 ~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 314 GWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp SCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred ceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence 5544 788999999876 555 444 4666664
No 177
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=4.5e-19 Score=178.03 Aligned_cols=254 Identities=16% Similarity=0.095 Sum_probs=169.7
Q ss_pred EeccCCCCeE---------EEEEc--CCCCE-EEEEeC-CCcEEEEEcC--C-CcEEEEecc-----cccCeeeEEECCC
Q psy226 101 ALSGHRSPVI---------KVIFH--PVFSL-MASCSE-DATIRLWDYE--T-GEYERALHG-----HLDSVQDIAFDQS 159 (406)
Q Consensus 101 ~l~~h~~~V~---------~v~~~--p~~~~-latgs~-dg~v~vwd~~--~-~~~~~~~~~-----h~~~V~~l~~~~~ 159 (406)
.+.+|...|. ...|+ ||++. |+.++. +..|.+|+.. + ++ ...+.. |...+.+++|+||
T Consensus 62 ~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spD 140 (662)
T 3azo_A 62 SALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPE 140 (662)
T ss_dssp ESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETT
T ss_pred eeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCC
Confidence 4445555554 55555 99988 775554 5667777766 3 44 444554 6678899999999
Q ss_pred CCEEEEEeCC----------CcEEEEeCCC------CeEEEEEe-cCCcceEEEEEecCCCEEEEEeCC--------CcE
Q psy226 160 GKLLVSCSAD----------MSLKLWDMST------YQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRD--------KTI 214 (406)
Q Consensus 160 g~~l~sgs~d----------~~i~vwd~~~------~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d--------~~i 214 (406)
|+.|++++.| ..|++||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|
T Consensus 141 g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 141 RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence 9999998877 5899999987 554 3454 555678889999999999887755 379
Q ss_pred EEEEcC-CC---eEEEEeecCCccEEEEEECCCCCEEEEEeCCC--eEEEEeCCCccceeEEecCCceEEEEEeCCCCCc
Q psy226 215 KMWEVA-TG---YCVKTLTGHREWVRQIKVSPDGTLLASCSNDH--TARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288 (406)
Q Consensus 215 ~iwd~~-~~---~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 288 (406)
.+||+. ++ .......+|...+..++|+|||++++++..++ .|.+||+.+++...... +...+....|.|+...
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~ 298 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTPGMRW 298 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCS
T ss_pred EEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccccCce
Confidence 999998 57 44444555678899999999999888888888 56666665554333222 2222211222222111
Q ss_pred cccccccCCCCCCCCCCEEEEEeCCCcEEEE--ECCCCeEEEEEeCCCcCEEEE-EEcCCCCEEEEEeCCCe--EEEEeC
Q psy226 289 ESISEAAGRPPGQGGGPYLATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGV-TFHPGGKYLVSCGDDKT--LRVWDT 363 (406)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lw--d~~~~~~~~~~~~h~~~v~~l-~~s~~g~~l~sgs~d~~--i~vwd~ 363 (406)
.. ..+++.++++++. +.++|| |+.+++ +..+..|...+..+ +++++.-++++++.+.. |.+||.
T Consensus 299 ~~---------~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~ 367 (662)
T 3azo_A 299 FA---------PLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDT 367 (662)
T ss_dssp EE---------ECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEET
T ss_pred Ee---------EeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEEC
Confidence 00 0124678888888 999999 665555 67777787778877 55544444455666654 555566
Q ss_pred CCCcc
Q psy226 364 ANKRN 368 (406)
Q Consensus 364 ~~~~~ 368 (406)
.+++.
T Consensus 368 ~~g~~ 372 (662)
T 3azo_A 368 VTGRA 372 (662)
T ss_dssp TTCCE
T ss_pred CCCce
Confidence 66654
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.83 E-value=4.3e-16 Score=140.00 Aligned_cols=276 Identities=9% Similarity=0.028 Sum_probs=199.3
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEe-cccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL-HGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~-~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
.+..+...+.++++.|++.+.++...++.|.+||.. ++..... ..+...+.+++++++|.+.++...++.|..||..
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 344566789999999999988887778999999988 6654332 3345678999999999988887778899999986
Q ss_pred CeEEEEEe--cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEE-eecCCccEEEEEECCCCCEEEEEeCCCeE
Q psy226 180 YQCLKTMQ--GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKT-LTGHREWVRQIKVSPDGTLLASCSNDHTA 256 (406)
Q Consensus 180 ~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~s~~~d~~v 256 (406)
++. ..+. .....+.++++.|++.++++...++.|..||. ++..... ...+...+..++++++|+++++...++.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 332 2222 24557889999999988887777889999998 5544332 23344568899999999888887778999
Q ss_pred EEEeCCCccceeE-EecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEE-EeCCC
Q psy226 257 RVWSLATKETKAE-LRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFT-LIGHD 334 (406)
Q Consensus 257 ~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~-~~~h~ 334 (406)
..||. +++.... +......+..+++.+ ++.+.++...++.|..||. ++..... ...+.
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~------------------~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 224 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGN------------------DDALWFVEIIGNKIGRITT-SGEITEFKIPTPN 224 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECT------------------TSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECC------------------CCCEEEEccCCceEEEECC-CCcEEEEECCCCC
Confidence 99998 5443322 222334566677665 3556666666788999999 6664332 33355
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee--ccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL--EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l--~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
..+.+++++++|+..++...++.|.+||. +++ +..+ ..+...+.++++ +++.+.++.+ .+.+..++
T Consensus 225 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~ 292 (299)
T 2z2n_A 225 ARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLT 292 (299)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEE
T ss_pred CCceeEEECCCCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEE
Confidence 67999999999997777667889999998 343 2233 344567899999 8888877765 45555555
No 179
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=8.4e-18 Score=170.17 Aligned_cols=244 Identities=15% Similarity=0.091 Sum_probs=180.8
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCc-------
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSEDA-----TIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS------- 171 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~dg-----~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~------- 171 (406)
+|...+..++|||||++||.++.++ .|++||+.+++.......+ ..+.+++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccc
Confidence 3545688999999999999776544 8999999999876543322 23778999999999999988876
Q ss_pred ---------EEEEeCCCCe----EEEEEecCCcceEEEEEecCCCEEEEEeC-----CCcEEEEEcCC------Ce-EEE
Q psy226 172 ---------LKLWDMSTYQ----CLKTMQGHDHNVTGVAFLPNSDFVLSASR-----DKTIKMWEVAT------GY-CVK 226 (406)
Q Consensus 172 ---------i~vwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-----d~~i~iwd~~~------~~-~~~ 226 (406)
|++|++.+++ .+.....|...+.++.|+|+|++|+.++. +..|.+||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 9999998765 22222234556789999999999887764 56899999987 53 356
Q ss_pred EeecCCccEEEEEECCCCCEEEEEeCCC----eEEEEeCCCccc--eeEEecCCc--eEEEEEeCCCCCccccccccCCC
Q psy226 227 TLTGHREWVRQIKVSPDGTLLASCSNDH----TARVWSLATKET--KAELRGHDH--TVECVAWAPGVASESISEAAGRP 298 (406)
Q Consensus 227 ~~~~~~~~v~~l~~~~~~~~l~s~~~d~----~v~vwd~~~~~~--~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~ 298 (406)
.+..+...+.. .|+|+|..|+..+.++ .|.+||+.++.. ...+..|.. .+..+.|.+
T Consensus 281 ~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------- 345 (710)
T 2xdw_A 281 KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVR-------------- 345 (710)
T ss_dssp EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEET--------------
T ss_pred EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEc--------------
Confidence 66666665554 4888998887766543 599999987642 345555543 677788764
Q ss_pred CCCCCCCEEEEEeCCCc--EEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEE-EEe---CCCeEEEEeCCCCc
Q psy226 299 PGQGGGPYLATGSRDKT--IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV-SCG---DDKTLRVWDTANKR 367 (406)
Q Consensus 299 ~~~~~~~~l~s~~~d~~--i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~-sgs---~d~~i~vwd~~~~~ 367 (406)
++.++++...|+. |.+||+.+|+.+..+..+...+..++++|++..++ +.+ ..++|++||+.+++
T Consensus 346 ----~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 346 ----SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ----TTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ----CCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 3557788888874 66678878887788887888899999999987665 333 34789999998776
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=1.4e-17 Score=168.56 Aligned_cols=239 Identities=10% Similarity=0.050 Sum_probs=172.9
Q ss_pred cccCeeeEEECCCCCEEEEEeCCC-----cEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCc--------
Q psy226 147 HLDSVQDIAFDQSGKLLVSCSADM-----SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT-------- 213 (406)
Q Consensus 147 h~~~V~~l~~~~~g~~l~sgs~d~-----~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~-------- 213 (406)
|...+.+++|+|||++|+.++.++ .|++||+.+++.......+ ..+.+++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 444688999999999998776543 8999999999876543322 23678999999999999888876
Q ss_pred --------EEEEEcCCCeE----EEEeecCCccEEEEEECCCCCEEEEEeC-----CCeEEEEeCCC------cc-ceeE
Q psy226 214 --------IKMWEVATGYC----VKTLTGHREWVRQIKVSPDGTLLASCSN-----DHTARVWSLAT------KE-TKAE 269 (406)
Q Consensus 214 --------i~iwd~~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~s~~~-----d~~v~vwd~~~------~~-~~~~ 269 (406)
|++|++.++.. +.....|..++..+.|+|||++|+.++. +..|++||+.+ +. ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 99999988752 2222335667889999999999887765 67899999976 32 3455
Q ss_pred EecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC----CcEEEEECCCCe--EEEEEeCCCc--CEEEEE
Q psy226 270 LRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD----KTIKLWDVGSGS--LLFTLIGHDN--WVRGVT 341 (406)
Q Consensus 270 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d----~~i~lwd~~~~~--~~~~~~~h~~--~v~~l~ 341 (406)
+..+...+.. .|+| +|..|+..+.+ ..|.+||+.++. ....+..|.. .+..++
T Consensus 282 l~~~~~~~~~-~~s~------------------dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTN------------------EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVA 342 (710)
T ss_dssp EECSSSSCEE-EEEE------------------ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE
T ss_pred eeCCCCcEEE-EEec------------------cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEE
Confidence 5555544443 2444 24445544443 369999998764 1234455543 688899
Q ss_pred EcCCCCEEEEEeCCCe--EEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEe----eCCCeEEEeec
Q psy226 342 FHPGGKYLVSCGDDKT--LRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG----SVDKTVKVWEC 405 (406)
Q Consensus 342 ~s~~g~~l~sgs~d~~--i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sg----s~Dg~v~iw~~ 405 (406)
|++++.++++...|+. |++||+.+++.++.+..+...+..++++|++..|+.. ...++|.+||+
T Consensus 343 ~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 343 CVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred EEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 9988888899988885 5667876777777887777889999999998766532 23478888885
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=1.3e-18 Score=163.01 Aligned_cols=252 Identities=12% Similarity=0.040 Sum_probs=174.0
Q ss_pred EEEcCCCcEEEEecccccC-----eeeEEECCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEecCCcceEEEEEecCCC
Q psy226 132 LWDYETGEYERALHGHLDS-----VQDIAFDQSGKLLVSCSAD---MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203 (406)
Q Consensus 132 vwd~~~~~~~~~~~~h~~~-----V~~l~~~~~g~~l~sgs~d---~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 203 (406)
..|..++.....+..+... +.+++|+|+|++|+.+... ..|.+||+.+++......++......+.|+|+|+
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~ 93 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDER 93 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCC
Confidence 4477777777776655433 7889999999998876543 3688889988876544333333333478999999
Q ss_pred EEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEE-------------------EEECCCCCEEEEE-----eCCCeEEEE
Q psy226 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ-------------------IKVSPDGTLLASC-----SNDHTARVW 259 (406)
Q Consensus 204 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~-------------------l~~~~~~~~l~s~-----~~d~~v~vw 259 (406)
.|+.++.++.|.+||+.++........+..+... +.++|+++.++.+ ..+..|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEE
Confidence 9999999999999999988776666555554433 3567888776654 456789999
Q ss_pred eCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC------CcEEEEECCCCeEEEEEeCC
Q psy226 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD------KTIKLWDVGSGSLLFTLIGH 333 (406)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~lwd~~~~~~~~~~~~h 333 (406)
|+.+++..... .+...+..+.|+|. ++..++..+.+ ..|.+||+..+... .+..+
T Consensus 174 d~~~g~~~~~~-~~~~~~~~~~~sp~-----------------dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~ 234 (396)
T 3c5m_A 174 DIETGELEVIH-QDTAWLGHPIYRPF-----------------DDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEH 234 (396)
T ss_dssp ETTTCCEEEEE-EESSCEEEEEEETT-----------------EEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCC
T ss_pred ECCCCcEEeec-cCCcccccceECCC-----------------CCCEEEEEecCCCCCCCceEEEEECCCCcee-Eeecc
Confidence 99877654433 45667788888872 13344444433 46888998765433 33333
Q ss_pred --CcCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCccceeeccccceEEEEEEeC-CCCEEEEee----------
Q psy226 334 --DNWVRGVTFHPGGKYLVSCGDD-----KTLRVWDTANKRNMKTLEAHSHFVTSLDFHR-AHPYVVTGS---------- 395 (406)
Q Consensus 334 --~~~v~~l~~s~~g~~l~sgs~d-----~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~-~~~~l~sgs---------- 395 (406)
...+..++|+|+|++|+.++.+ +.|++||+.+++...... ... .. +.|+| +++++++++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC-------
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccc
Confidence 2358889999999988776543 559999998876433221 112 23 88999 999988765
Q ss_pred ------CCCeEEEeec
Q psy226 396 ------VDKTVKVWEC 405 (406)
Q Consensus 396 ------~Dg~v~iw~~ 405 (406)
.++.|.+||+
T Consensus 312 ~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNT 327 (396)
T ss_dssp ---CCCCCCEEEEEET
T ss_pred cccccCCCCcEEEEec
Confidence 3478999985
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=6.6e-17 Score=145.70 Aligned_cols=241 Identities=13% Similarity=0.134 Sum_probs=173.4
Q ss_pred EEeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 100 FALSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
..+..+.....+++|+|+++ +++++..++.|..||..++ ...+..+...+.+++++++|+++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34555666788999999998 8889999999999999887 45566677789999999999988887777899999997
Q ss_pred CCeEEEEEecC----CcceEEEEEecCCCEEEEE----e-------------CCCcEEEEEcCCCeEEEEeecCCccEEE
Q psy226 179 TYQCLKTMQGH----DHNVTGVAFLPNSDFVLSA----S-------------RDKTIKMWEVATGYCVKTLTGHREWVRQ 237 (406)
Q Consensus 179 ~~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~----s-------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 237 (406)
+++........ ...+..++++|+|+++++. + ..+.|..++.. +. ...+..+......
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~g 176 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNG 176 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCcc
Confidence 77654333221 1245679999999988873 2 12345555544 43 3445566677889
Q ss_pred EEECCCCCEEEEEeCCCeEEEEeCC-Cccc---eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC
Q psy226 238 IKVSPDGTLLASCSNDHTARVWSLA-TKET---KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD 313 (406)
Q Consensus 238 l~~~~~~~~l~s~~~d~~v~vwd~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 313 (406)
++|+|+|+.+++.+.++.|.+|++. .+.. ...+..+...+..+++.+ +|.+.++. +
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~------------------~G~l~v~~--~ 236 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDA------------------GGLIWASA--G 236 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBT------------------TSCEEEEE--T
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECC------------------CCCEEEEc--C
Confidence 9999999988888888999999986 3332 112222222333444444 45555544 7
Q ss_pred CcEEEEECCCCeEEEEEeCCCcCEEEEEE-cCCCCEEEEEeCCCeEEEEeCCCCc
Q psy226 314 KTIKLWDVGSGSLLFTLIGHDNWVRGVTF-HPGGKYLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 314 ~~i~lwd~~~~~~~~~~~~h~~~v~~l~~-s~~g~~l~sgs~d~~i~vwd~~~~~ 367 (406)
+.|.+||.. ++.+..+..+.. +.+++| +|+++.|++++.++ +..++..+.+
T Consensus 237 ~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 237 DGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp TEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred CeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 889999986 777778877777 899999 68999999888764 4445655543
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.81 E-value=2.1e-17 Score=148.97 Aligned_cols=234 Identities=12% Similarity=0.098 Sum_probs=174.7
Q ss_pred EEecccccCeeeEEECCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcC
Q psy226 142 RALHGHLDSVQDIAFDQSGK-LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220 (406)
Q Consensus 142 ~~~~~h~~~V~~l~~~~~g~-~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~ 220 (406)
..+..+.....+++|+|+|+ +++++..++.|..||..++ ...+..+...+.+++++|+++++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 34444556678999999998 7788888999999999876 56666777889999999999988777777899999998
Q ss_pred CCeEEEEeecC----CccEEEEEECCCCCEEEEE----e-------------CCCeEEEEeCCCccceeEEecCCceEEE
Q psy226 221 TGYCVKTLTGH----REWVRQIKVSPDGTLLASC----S-------------NDHTARVWSLATKETKAELRGHDHTVEC 279 (406)
Q Consensus 221 ~~~~~~~~~~~----~~~v~~l~~~~~~~~l~s~----~-------------~d~~v~vwd~~~~~~~~~~~~~~~~v~~ 279 (406)
++......... ...+..++++|+|+++++. + ..+.|..++.. .....+..+......
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GTLSAPIRDRVKPNG 176 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SCEEEEECCCSSEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC--CCEEEeecCCCCCcc
Confidence 88754443221 1245679999999988873 2 13455555554 333444555566778
Q ss_pred EEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECC-CCeE---EEEEeCCCcCEEEEEEcCCCCEEEEEeCC
Q psy226 280 VAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG-SGSL---LFTLIGHDNWVRGVTFHPGGKYLVSCGDD 355 (406)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~-~~~~---~~~~~~h~~~v~~l~~s~~g~~l~sgs~d 355 (406)
++|+| ++..+++.+.++.|.+||+. ++.. ...+..+...+.+++++++|+++++. +
T Consensus 177 i~~s~------------------dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~ 236 (296)
T 3e5z_A 177 LAFLP------------------SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--G 236 (296)
T ss_dssp EEECT------------------TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--T
T ss_pred EEECC------------------CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--C
Confidence 88887 36667777788999999986 5554 23333355567789999999977766 7
Q ss_pred CeEEEEeCCCCccceeeccccceEEEEEE-eCCCCEEEEeeCCCeEE
Q psy226 356 KTLRVWDTANKRNMKTLEAHSHFVTSLDF-HRAHPYVVTGSVDKTVK 401 (406)
Q Consensus 356 ~~i~vwd~~~~~~~~~l~~h~~~v~~l~~-~~~~~~l~sgs~Dg~v~ 401 (406)
+.|.+||.. ++.+..+..+.. +++++| .|+++.|.+++.++..+
T Consensus 237 ~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 237 DGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp TEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred CeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 899999986 777777777776 899999 58999898888776444
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=3.5e-17 Score=145.22 Aligned_cols=242 Identities=8% Similarity=-0.043 Sum_probs=172.5
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 108 PVIKVIFHPVFSLMA-SCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 108 ~V~~v~~~p~~~~la-tgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
...+++++|++++++ +.+.++.|.+||..++........+...+.+++++++|+++++.. ++.|.+||..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 567899999999888 557889999999776554332233445788999999999666655 889999998765432221
Q ss_pred ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc
Q psy226 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET 266 (406)
Q Consensus 187 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 266 (406)
......+.++++.|+++++++...++.|.+|+..+.............+..++++++|+++++...++.|.+||......
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 12335688999999999877777788999998665543322223334578899999999888877889999999876544
Q ss_pred eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCC
Q psy226 267 KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG 346 (406)
Q Consensus 267 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g 346 (406)
......+...+..+++.+ +|.++++...++.|.+||............+...+.+++++|+|
T Consensus 184 ~~~~~~~~~~p~~i~~d~------------------~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 184 VVLPFTDITAPWGIAVDE------------------AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp EECCCSSCCSEEEEEECT------------------TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTC
T ss_pred EeecccCCCCceEEEECC------------------CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCC
Confidence 332223334566777766 35566666678899999987654433222344678999999999
Q ss_pred CEEEEEeCCCeEEEEeCCCCcc
Q psy226 347 KYLVSCGDDKTLRVWDTANKRN 368 (406)
Q Consensus 347 ~~l~sgs~d~~i~vwd~~~~~~ 368 (406)
+.+++.+.+++|++++....+.
T Consensus 246 ~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CEEEEEGGGTEEEEECCCGGGS
T ss_pred CEEEEECCCCEEEEEcCCCccc
Confidence 9888888999999999876554
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.80 E-value=5.5e-17 Score=149.41 Aligned_cols=233 Identities=12% Similarity=0.163 Sum_probs=164.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCC---C--cEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCC------------
Q psy226 107 SPVIKVIFHPVFSLMASCSED---A--TIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD------------ 169 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~d---g--~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d------------ 169 (406)
..+..++|+|+|+.||.++.+ + .|.+||+.+++.......+ . +.+++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 467889999999999987754 3 3888898888765554443 3 9999999999999887643
Q ss_pred ---------------CcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCC-------cEEEEEcCCCeEEEE
Q psy226 170 ---------------MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK-------TIKMWEVATGYCVKT 227 (406)
Q Consensus 170 ---------------~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-------~i~iwd~~~~~~~~~ 227 (406)
..|.+||+.+++.+..+.. . .+..+.|+|+| ++++++.+. ...+|.+.++.. ..
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~ 212 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EK 212 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EE
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EE
Confidence 5789999998876455554 3 78899999999 877776652 445554445543 44
Q ss_pred eecCCccEEEEEECCCCCEEEEEeCC--------CeEEEEeCCCccceeEEecCCceEEE-EEeCCCCCccccccccCCC
Q psy226 228 LTGHREWVRQIKVSPDGTLLASCSND--------HTARVWSLATKETKAELRGHDHTVEC-VAWAPGVASESISEAAGRP 298 (406)
Q Consensus 228 ~~~~~~~v~~l~~~~~~~~l~s~~~d--------~~v~vwd~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~ 298 (406)
+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| +++.......+...+.. +.|+ +
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-d------------- 273 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-G------------- 273 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-T-------------
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-C-------------
Confidence 4444 445444 9999998887754 3688888 44444334455667775 7775 3
Q ss_pred CCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeE-EEEeCCCCccceeecccc
Q psy226 299 PGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL-RVWDTANKRNMKTLEAHS 376 (406)
Q Consensus 299 ~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i-~vwd~~~~~~~~~l~~h~ 376 (406)
+ ++++++.++.++|| +.+++.. .+..+...|.+++|+| .++++++.++.. .+|.+. ++ ...+..|.
T Consensus 274 -----g-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n 340 (347)
T 2gop_A 274 -----K-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYN 340 (347)
T ss_dssp -----E-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTT
T ss_pred -----c-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEecccc
Confidence 4 78889999999999 8766654 4445577899999999 677777776654 677665 43 34454443
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.79 E-value=3.2e-18 Score=172.76 Aligned_cols=241 Identities=7% Similarity=-0.015 Sum_probs=171.3
Q ss_pred cCCCCeEEEEEcCCCCEEE-----EEeCCCcEEEEEcCCCcEEEEecccccCe--eeEEECCCCCEEEEEeCCCc-----
Q psy226 104 GHRSPVIKVIFHPVFSLMA-----SCSEDATIRLWDYETGEYERALHGHLDSV--QDIAFDQSGKLLVSCSADMS----- 171 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~la-----tgs~dg~v~vwd~~~~~~~~~~~~h~~~V--~~l~~~~~g~~l~sgs~d~~----- 171 (406)
+|...+..++|||||++|| +|+.+.+|++||+.+++... ..+...+ .+++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4666789999999999999 55556789999999987541 2233333 68999999999999998876
Q ss_pred --------EEEEeCCCCe----EEEEEecCCcceEEEEEecCCCEEEEEeCCC----cEEEEEcCCCeEEEEeecCCccE
Q psy226 172 --------LKLWDMSTYQ----CLKTMQGHDHNVTGVAFLPNSDFVLSASRDK----TIKMWEVATGYCVKTLTGHREWV 235 (406)
Q Consensus 172 --------i~vwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~----~i~iwd~~~~~~~~~~~~~~~~v 235 (406)
|++|++.+++ ++.....|...+.++.|+|+|++|+.++.++ .|.+||..++. ...+..+...+
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~ 274 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAK 274 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCce
Confidence 9999998765 3333344556788999999999888877665 67777765554 34455555555
Q ss_pred EEEEECCCCCEEEEEe---CCCeEEEEeCCCccc--eeEEecC--CceEEEEEeCCCCCccccccccCCCCCCCCCCEEE
Q psy226 236 RQIKVSPDGTLLASCS---NDHTARVWSLATKET--KAELRGH--DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA 308 (406)
Q Consensus 236 ~~l~~~~~~~~l~s~~---~d~~v~vwd~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 308 (406)
....+ ++|.+++... .++.|.+||+.++.. ...+..+ ...+..+.|. ++.+++
T Consensus 275 ~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-------------------~~~lv~ 334 (695)
T 2bkl_A 275 YEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-------------------GGHLSL 334 (695)
T ss_dssp EEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-------------------TTEEEE
T ss_pred EEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-------------------CCEEEE
Confidence 55556 5666444443 258899999977653 2333333 4456777665 255788
Q ss_pred EEeCCCcEEEEECC-CCeEEEEEeCC-CcCEEEEEEcCCCCEEEEE-e---CCCeEEEEeCCCCc
Q psy226 309 TGSRDKTIKLWDVG-SGSLLFTLIGH-DNWVRGVTFHPGGKYLVSC-G---DDKTLRVWDTANKR 367 (406)
Q Consensus 309 s~~~d~~i~lwd~~-~~~~~~~~~~h-~~~v~~l~~s~~g~~l~sg-s---~d~~i~vwd~~~~~ 367 (406)
+...|+..+||.+. +++....+..+ ...+..++++|+++.|+.. + ..++|++||+.+++
T Consensus 335 ~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 335 EYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88999988887654 46666666555 6678888999999876632 2 34789999998765
No 187
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.79 E-value=2.2e-15 Score=135.35 Aligned_cols=280 Identities=10% Similarity=0.020 Sum_probs=198.4
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE-ecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~-~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
+.+......+.++++.+++.+.++...++.|.+||.. ++.... +..+...+.+++++++|.+.++...++.|..||..
T Consensus 13 ~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 13 FNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 4444556678999999999988888888999999988 665442 33344678999999999988877778889999987
Q ss_pred CCeEEE-EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEE-EeecCCccEEEEEECCCCCEEEEEeCCCeE
Q psy226 179 TYQCLK-TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK-TLTGHREWVRQIKVSPDGTLLASCSNDHTA 256 (406)
Q Consensus 179 ~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v 256 (406)
++... .+......+.++++.+++.++++...++.|..+|.. +.... .+......+..++++++|+++++...++.|
T Consensus 92 -g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 92 -GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp -SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred -CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 55432 222234678999999999888877778899999987 55442 233344568899999999977777778899
Q ss_pred EEEeCCCccceeE-EecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEE-EeCCC
Q psy226 257 RVWSLATKETKAE-LRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFT-LIGHD 334 (406)
Q Consensus 257 ~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~-~~~h~ 334 (406)
..+|. ++..... +..+...+..+++.+ ++.+.++....+.|.+||. ++..... +..+.
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~------------------~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 229 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGN------------------DGALWFVEIMGNKIGRITT-TGEISEYDIPTPN 229 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECT------------------TSSEEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECC------------------CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCC
Confidence 99998 4333221 112334456666665 3555655556678999998 5554332 33455
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccc-eeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM-KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~-~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
..+.+++++++|+..++...++.|..||. +++.. ..+......+.++++++++.+.++.. . .|..+|.
T Consensus 230 ~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 230 ARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred CCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 67899999999997777767799999998 34322 12232345678999999998777665 4 6776664
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.79 E-value=6.4e-18 Score=170.58 Aligned_cols=267 Identities=13% Similarity=0.006 Sum_probs=180.8
Q ss_pred CCCCEEEEEeCCC---c--EEEEEcCCCcEEEEec------ccccCeeeEEECCCCCEEE-----EEeCCCcEEEEeCCC
Q psy226 116 PVFSLMASCSEDA---T--IRLWDYETGEYERALH------GHLDSVQDIAFDQSGKLLV-----SCSADMSLKLWDMST 179 (406)
Q Consensus 116 p~~~~latgs~dg---~--v~vwd~~~~~~~~~~~------~h~~~V~~l~~~~~g~~l~-----sgs~d~~i~vwd~~~ 179 (406)
|+|.+++-...++ . +.+.+..+++....+. +|...+.+++|||||++|+ .|+.+.+|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 5666666554433 2 3444444554333332 4555789999999999998 444557899999998
Q ss_pred CeEEEEEecCCcce--EEEEEecCCCEEEEEeCCCc-------------EEEEEcCCCe----EEEEeecCCccEEEEEE
Q psy226 180 YQCLKTMQGHDHNV--TGVAFLPNSDFVLSASRDKT-------------IKMWEVATGY----CVKTLTGHREWVRQIKV 240 (406)
Q Consensus 180 ~~~~~~~~~h~~~v--~~~~~~p~~~~l~s~s~d~~-------------i~iwd~~~~~----~~~~~~~~~~~v~~l~~ 240 (406)
++.+. ..+...+ .+++|+|+|+.|+.++.|.. |++|++.++. .+.....|...+..+.|
T Consensus 157 g~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~ 234 (695)
T 2bkl_A 157 GEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDL 234 (695)
T ss_dssp CCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEE
T ss_pred CCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEE
Confidence 87541 1122222 67999999999999998876 9999998875 33333456678899999
Q ss_pred CCCCCEEEEEeCCC----eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe---CC
Q psy226 241 SPDGTLLASCSNDH----TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS---RD 313 (406)
Q Consensus 241 ~~~~~~l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~---~d 313 (406)
+|||++|+.++.++ .|.+|+..++. ...+..+...+....+ + ++.+++.+. .+
T Consensus 235 SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~------------------~g~l~~~s~~~~~~ 294 (695)
T 2bkl_A 235 SRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-W------------------KDRFYVLTDEGAPR 294 (695)
T ss_dssp CTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-E------------------TTEEEEEECTTCTT
T ss_pred CCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-c------------------CCcEEEEECCCCCC
Confidence 99999998887666 67777655443 3344444444444444 2 133444443 25
Q ss_pred CcEEEEECCCCeE--EEEEeC-C-CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCccceeeccc-cceEEEEEEeCC
Q psy226 314 KTIKLWDVGSGSL--LFTLIG-H-DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAH-SHFVTSLDFHRA 387 (406)
Q Consensus 314 ~~i~lwd~~~~~~--~~~~~~-h-~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~-~~~~~~~l~~h-~~~v~~l~~~~~ 387 (406)
+.|.+||+.++.. ...+.. + ...+..++|+ ++.++++...|+..+||.+. +++....+..+ ...|..++++|+
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d 373 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLED 373 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTT
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCC
Confidence 7899999987652 123333 3 4568888998 77888999999998888654 35555666554 667888999999
Q ss_pred CCEEE----EeeCCCeEEEeec
Q psy226 388 HPYVV----TGSVDKTVKVWEC 405 (406)
Q Consensus 388 ~~~l~----sgs~Dg~v~iw~~ 405 (406)
+..|+ +....++|.+||+
T Consensus 374 ~~~l~~~~ss~~~P~~v~~~d~ 395 (695)
T 2bkl_A 374 LDDAYYVFTSFTTPRQIYKTSV 395 (695)
T ss_dssp CSEEEEEEEETTEEEEEEEEET
T ss_pred CCEEEEEEcCCCCCCEEEEEEC
Confidence 98776 3344578999986
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=1.5e-16 Score=145.70 Aligned_cols=256 Identities=13% Similarity=0.052 Sum_probs=181.9
Q ss_pred CCCcEEEEEcCCCcEEEEec------ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEe
Q psy226 126 EDATIRLWDYETGEYERALH------GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL 199 (406)
Q Consensus 126 ~dg~v~vwd~~~~~~~~~~~------~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~ 199 (406)
.+++|.++|..+++....+. .......++.+. ++++.++...++.|.+||..+++.+.++.. ......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence 48999999999998765542 112346778874 345556666679999999999998888753 4568899999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCC-----ccEEEEEECCCCCEEEEEe-CCCeEEEEeCCCccceeEEecC
Q psy226 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHR-----EWVRQIKVSPDGTLLASCS-NDHTARVWSLATKETKAELRGH 273 (406)
Q Consensus 200 p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~l~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~ 273 (406)
|++...++...++.|.+||..++.....+.... .....+++ .++.++++.. .++.|.++|+.+.+....+...
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 998544444489999999999998877765433 14456777 4444455544 4899999999987766555432
Q ss_pred CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC----------CcEEEEECCCCeEEEEEeCC-CcCEEEEEE
Q psy226 274 DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD----------KTIKLWDVGSGSLLFTLIGH-DNWVRGVTF 342 (406)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d----------~~i~lwd~~~~~~~~~~~~h-~~~v~~l~~ 342 (406)
. ....+.+.| +|.+++++..+ +.|.++|..+++....+.-. ......++|
T Consensus 172 ~-~p~~i~~~~------------------dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 172 I-QPTSLVMDK------------------YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp S-CBCCCEECT------------------TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEE
T ss_pred C-CccceEEcC------------------CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEE
Confidence 2 122334433 45666665554 78999999999887666432 346899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCcccee--eccccceEEEEEEeC-CCCEEEEe----eCCCeEEEeec
Q psy226 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKT--LEAHSHFVTSLDFHR-AHPYVVTG----SVDKTVKVWEC 405 (406)
Q Consensus 343 s~~g~~l~sgs~d~~i~vwd~~~~~~~~~--l~~h~~~v~~l~~~~-~~~~l~sg----s~Dg~v~iw~~ 405 (406)
+|++++|+++.. .|.+||..+++.... +.........++++| ++.+.++. ..++.|.+||.
T Consensus 233 ~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 233 NGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp CTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred ecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 999999887765 899999988775321 222245688999999 56666776 67899999985
No 190
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=1e-15 Score=140.13 Aligned_cols=235 Identities=14% Similarity=0.130 Sum_probs=168.8
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCC----CcEEEE
Q psy226 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD----MSLKLW 175 (406)
Q Consensus 100 ~~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d----~~i~vw 175 (406)
..+.++...+.+++|+|++.+++++..++.|.+||..+++.......+...+.+++++++|+++++...+ +.|.+|
T Consensus 38 ~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 38 LEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp EEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred EEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 3456677778999999999988899999999999999988766554566789999999999988887766 689999
Q ss_pred eCCCCeEEEEEe--cCCcceEEEEEecCCCEEEEEeC------CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE
Q psy226 176 DMSTYQCLKTMQ--GHDHNVTGVAFLPNSDFVLSASR------DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247 (406)
Q Consensus 176 d~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 247 (406)
|..++.....+. .+...+.+++++|+++++++... .+.|..+|..++.... +..+...+..++|+|+|+.+
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEE
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEE
Confidence 998776543332 23456899999999988776654 2456666665544333 32333457889999999865
Q ss_pred -EEEeCCCeEEEEeCCC-ccceeEE--------ecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEE
Q psy226 248 -ASCSNDHTARVWSLAT-KETKAEL--------RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIK 317 (406)
Q Consensus 248 -~s~~~d~~v~vwd~~~-~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 317 (406)
++.+.++.|.+||+.+ +.....+ .++ ..+..+++.+ +|.++++...++.|.
T Consensus 197 ~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~------------------~G~l~v~~~~~~~v~ 257 (333)
T 2dg1_A 197 WVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS------------------DDNLYVAMYGQGRVL 257 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT------------------TCCEEEEEETTTEEE
T ss_pred EEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECC------------------CCCEEEEEcCCCEEE
Confidence 4555688999999864 2222111 111 2455666655 466777777788999
Q ss_pred EEECCCCeEEEEEeCCCc------CEEEEEEcCCCCEEEEEeCC
Q psy226 318 LWDVGSGSLLFTLIGHDN------WVRGVTFHPGGKYLVSCGDD 355 (406)
Q Consensus 318 lwd~~~~~~~~~~~~h~~------~v~~l~~s~~g~~l~sgs~d 355 (406)
+||. +++.+..+..+.. .+.+++|+|+++.|+.++.+
T Consensus 258 ~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 258 VFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 9998 5666666654433 68999999998777655554
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.78 E-value=9.5e-17 Score=142.37 Aligned_cols=237 Identities=9% Similarity=0.008 Sum_probs=166.2
Q ss_pred CeeeEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEe
Q psy226 150 SVQDIAFDQSGKLLV-SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228 (406)
Q Consensus 150 ~V~~l~~~~~g~~l~-sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 228 (406)
...+++++++|++.+ +.+.++.|.+||..+.........+...+.++++.|+++++++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 677899999999777 446788999999765443222123335678899999998666655 889999998765433222
Q ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEE
Q psy226 229 TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA 308 (406)
Q Consensus 229 ~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 308 (406)
......+..++++|+|+++++...++.|.+|+..+.............+..+++.| ++.+++
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~------------------~g~l~v 165 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDN------------------SGNVYV 165 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECT------------------TCCEEE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeC------------------CCCEEE
Confidence 23335688999999999888888889999997654433221112222344555554 356666
Q ss_pred EEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCC
Q psy226 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388 (406)
Q Consensus 309 s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~ 388 (406)
+...++.|.+||............+...+.+++++++|..+++...++.|.+||............+...+.++++++++
T Consensus 166 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 166 TDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp EEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTC
T ss_pred EECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCC
Confidence 66678899999988766554433444678999999999888887788999999987654332222333568999999999
Q ss_pred CEEEEeeCCCeEEEeec
Q psy226 389 PYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 389 ~~l~sgs~Dg~v~iw~~ 405 (406)
.++++...++.|+++++
T Consensus 246 ~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CEEEEEGGGTEEEEECC
T ss_pred CEEEEECCCCEEEEEcC
Confidence 99999999999999986
No 192
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.78 E-value=1.5e-16 Score=147.56 Aligned_cols=243 Identities=10% Similarity=0.097 Sum_probs=164.5
Q ss_pred CCCEEEEEe------CCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEe----------CCCcEEEEEcCCC
Q psy226 159 SGKLLVSCS------ADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS----------RDKTIKMWEVATG 222 (406)
Q Consensus 159 ~g~~l~sgs------~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s----------~d~~i~iwd~~~~ 222 (406)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+|+++++++++ .+++|.+||..++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 556666553 3779999999999988888776655 899999999998876 3678999999998
Q ss_pred eEEEEeecC------CccEEEEEECCCCCEEEEEeC--CCeEEEEeCCCccceeE-EecCCce---------EEEEEeCC
Q psy226 223 YCVKTLTGH------REWVRQIKVSPDGTLLASCSN--DHTARVWSLATKETKAE-LRGHDHT---------VECVAWAP 284 (406)
Q Consensus 223 ~~~~~~~~~------~~~v~~l~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~-~~~~~~~---------v~~~~~~~ 284 (406)
+.+..+... ......++++|+|++++++.. +++|.+||+.+.+.+.. +...... ..-+...+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~ 171 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICG 171 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEET
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECC
Confidence 888877532 234567999999999988864 68999999998876655 3221110 00011111
Q ss_pred CCCcc--------ccc---------cccCCC---CCCCCCCEEEEEeCCCcEEEEECCCCeE--EEEEeC------CCcC
Q psy226 285 GVASE--------SIS---------EAAGRP---PGQGGGPYLATGSRDKTIKLWDVGSGSL--LFTLIG------HDNW 336 (406)
Q Consensus 285 ~~~~~--------~~~---------~~~~~~---~~~~~~~~l~s~~~d~~i~lwd~~~~~~--~~~~~~------h~~~ 336 (406)
+.... ... .....+ .....+..++..+.++.|.++|+..+.. ...+.- +..+
T Consensus 172 dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
T 2oiz_A 172 DGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNW 251 (361)
T ss_dssp TSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTC
T ss_pred CCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccccc
Confidence 11000 000 000000 0012234556666788899999865432 222111 0111
Q ss_pred ----EEEEEEcCCCCEEEEEeC-----------CCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEE
Q psy226 337 ----VRGVTFHPGGKYLVSCGD-----------DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVK 401 (406)
Q Consensus 337 ----v~~l~~s~~g~~l~sgs~-----------d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~ 401 (406)
...++|+|+++.++++.. .+.|.+||..+++.+.++..+. +.+++|+|++++|++++. +.|.
T Consensus 252 ~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 252 VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEE
T ss_pred ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEE
Confidence 112789999888776543 3589999999999999998876 899999999999998886 9999
Q ss_pred EeecC
Q psy226 402 VWECR 406 (406)
Q Consensus 402 iw~~~ 406 (406)
+||..
T Consensus 329 v~D~~ 333 (361)
T 2oiz_A 329 VYDIS 333 (361)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99963
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=3.3e-16 Score=139.51 Aligned_cols=213 Identities=14% Similarity=0.086 Sum_probs=170.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEecccc-cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCC-cceE
Q psy226 117 VFSLMASCSEDATIRLWDYETGEYERALHGHL-DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHD-HNVT 194 (406)
Q Consensus 117 ~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~-~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~-~~v~ 194 (406)
.+++|++++.|+.|.+||.++|+.+..+..+. ..+.++.+.|+|++++ +.++.|..||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 45789999999999999999999998888766 5789999999999888 45778999999 788888887653 5788
Q ss_pred EEEEecCCCEEEEEeC-CCcEEEEEcCCCeEEEEeec------CCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccce
Q psy226 195 GVAFLPNSDFVLSASR-DKTIKMWEVATGYCVKTLTG------HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267 (406)
Q Consensus 195 ~~~~~p~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 267 (406)
++.+.|+|+++++.+. ++.|..+|. +|+.+..+.. +..+...+++.++|+++++...++.|..||.. ++.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 9999999999999887 777877775 6777666541 22345567789999999999999999999987 7777
Q ss_pred eEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC------cCEEEEE
Q psy226 268 AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD------NWVRGVT 341 (406)
Q Consensus 268 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~------~~v~~l~ 341 (406)
-.+..... +.++...+ ++.++++++.++.|..+|..+|+.+.++..+. ..+..+.
T Consensus 159 w~~~~~~~-~~~~~~~~------------------~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~ 219 (276)
T 3no2_A 159 NSVKLSGT-PFSSAFLD------------------NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLF 219 (276)
T ss_dssp EEEECSSC-CCEEEECT------------------TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEE
T ss_pred EEEECCCC-ccceeEcC------------------CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccce
Confidence 66654322 22333333 57788888888899999999999998886432 3478899
Q ss_pred EcCCCCEEEEEe
Q psy226 342 FHPGGKYLVSCG 353 (406)
Q Consensus 342 ~s~~g~~l~sgs 353 (406)
..++|..+++.+
T Consensus 220 ~~~~G~i~v~~~ 231 (276)
T 3no2_A 220 PLQNGGLYICNW 231 (276)
T ss_dssp ECTTSCEEEEEE
T ss_pred EcCCCCEEEEec
Confidence 999999988874
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.76 E-value=8.4e-15 Score=143.02 Aligned_cols=280 Identities=12% Similarity=0.065 Sum_probs=198.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcC--CCcEEEEecccccCeeeEEEC----CCCCEEEEEeC-CCcEEEEeCCC
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYE--TGEYERALHGHLDSVQDIAFD----QSGKLLVSCSA-DMSLKLWDMST 179 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~--~~~~~~~~~~h~~~V~~l~~~----~~g~~l~sgs~-d~~i~vwd~~~ 179 (406)
..+..++|+|+++++++++.|+.|.+||+. +++....+.... ....++|+ |+|+++++++. +++|.++|..+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 356789999999999999999999999995 777777776433 35789999 69998887765 58999999999
Q ss_pred CeEEEEEecC-----------CcceEEEEEecCCCE-EEEEeCCCcEEEEEcCCCeE--EEEeecCCccEEEEEECCCCC
Q psy226 180 YQCLKTMQGH-----------DHNVTGVAFLPNSDF-VLSASRDKTIKMWEVATGYC--VKTLTGHREWVRQIKVSPDGT 245 (406)
Q Consensus 180 ~~~~~~~~~h-----------~~~v~~~~~~p~~~~-l~s~s~d~~i~iwd~~~~~~--~~~~~~~~~~v~~l~~~~~~~ 245 (406)
.+.++.+... ...+..+.+++++.. ++....+|.|.++|..+... +..+ ........+.|+|+|+
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr 354 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHR 354 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSC
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCCC
Confidence 9888776521 125778888887664 45556679999999876532 2222 2344577889999999
Q ss_pred EEEEEe-CCCeEEEEeCCCccceeEEec-CC--ceEEEEE-eCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEEEE
Q psy226 246 LLASCS-NDHTARVWSLATKETKAELRG-HD--HTVECVA-WAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIKLW 319 (406)
Q Consensus 246 ~l~s~~-~d~~v~vwd~~~~~~~~~~~~-~~--~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~lw 319 (406)
+++++. .++.|.++|+.+.+....+.. .. ++-.... +.|+ .+...+++. .++.|.++
T Consensus 355 ~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~-----------------~g~v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 355 YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPT-----------------FGPVWATSHMGDDSVALI 417 (567)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETT-----------------TEEEEEEEBSSSSEEEEE
T ss_pred EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCC-----------------CCcEEEeCCCCCCeEEEe
Confidence 886655 689999999998776544432 11 0000111 2221 244555554 46899999
Q ss_pred ECCC-------CeEEEEEeCCCcCEEEEEEcCCCCEEEEEeC-------CCeEEEEeCCCC-----c-cceeec------
Q psy226 320 DVGS-------GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-------DKTLRVWDTANK-----R-NMKTLE------ 373 (406)
Q Consensus 320 d~~~-------~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~-------d~~i~vwd~~~~-----~-~~~~l~------ 373 (406)
|..+ .+.+.++......-..+.++|++++|.+... ..+|.|+|+.+. . .+..+.
T Consensus 418 d~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~ 497 (567)
T 1qks_A 418 GTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG 497 (567)
T ss_dssp ECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHT
T ss_pred cCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccc
Confidence 9987 5677777765443345778999999987653 359999999876 2 112332
Q ss_pred --cccceEEEEEEeCCCCEEEEee-----CCCeEEEeec
Q psy226 374 --AHSHFVTSLDFHRAHPYVVTGS-----VDKTVKVWEC 405 (406)
Q Consensus 374 --~h~~~v~~l~~~~~~~~l~sgs-----~Dg~v~iw~~ 405 (406)
.-...+..+.|+|+|..+..+. .++.|.++|.
T Consensus 498 ~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 498 ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred cCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 1134688999999999876653 3789999885
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.75 E-value=1.2e-15 Score=135.91 Aligned_cols=219 Identities=17% Similarity=0.164 Sum_probs=167.4
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEecCC-cceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecC-CccEE
Q psy226 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH-REWVR 236 (406)
Q Consensus 159 ~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-~~~v~ 236 (406)
.+++|++++.|+.|.+||.++++.+..+..+. ..+.++.++|+|++++ +.++.|..||. +|+.+..+..+ ...+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46889999999999999999999999988776 4788999999999888 45788999998 89988888865 35788
Q ss_pred EEEECCCCCEEEEEeC-CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCc
Q psy226 237 QIKVSPDGTLLASCSN-DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKT 315 (406)
Q Consensus 237 ~l~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 315 (406)
++.+.|+|+++++.+. ++.+..+|. .++.+..+.. ......... .........+|.++++.+.++.
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~----------~~~~~~~~~--~~~~v~~~~~G~~lv~~~~~~~ 147 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEF----------ETGIERPHA--QFRQINKNKKGNYLVPLFATSE 147 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEE----------CCSCSSGGG--SCSCCEECTTSCEEEEETTTTE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEec----------cCCCCcccc--cccCceECCCCCEEEEecCCCE
Confidence 8999999999999887 777877775 4444433321 110000000 0000011236789999999999
Q ss_pred EEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecccc------ceEEEEEEeCCCC
Q psy226 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS------HFVTSLDFHRAHP 389 (406)
Q Consensus 316 i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~------~~v~~l~~~~~~~ 389 (406)
|..||.. |+.+.++... ..+.++.+.++|+.+++++.+++|..+|..+++.+-++..+. ..+..++..+++.
T Consensus 148 v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 148 VREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp EEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred EEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC
Confidence 9999997 9999888764 345677889999999999999999999999898877775332 3488899999999
Q ss_pred EEEEee
Q psy226 390 YVVTGS 395 (406)
Q Consensus 390 ~l~sgs 395 (406)
++++..
T Consensus 226 i~v~~~ 231 (276)
T 3no2_A 226 LYICNW 231 (276)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 888773
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.75 E-value=6.1e-15 Score=143.98 Aligned_cols=269 Identities=13% Similarity=0.081 Sum_probs=193.5
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC--CCeEEEEEecCCcce
Q psy226 116 PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS--TYQCLKTMQGHDHNV 193 (406)
Q Consensus 116 p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~--~~~~~~~~~~h~~~v 193 (406)
|.+.++++...+++|.++|..+++....+... ..+..+.|+|+|+++++++.|+.|.+||+. +++.+..+.... ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CC
Confidence 44567788889999999999999988877632 356789999999999999999999999995 778777776543 45
Q ss_pred EEEEEe----cCCCEEEEEeC-CCcEEEEEcCCCeEEEEeec----------CCc-cEEEEEECCCCCE-EEEEeCCCeE
Q psy226 194 TGVAFL----PNSDFVLSASR-DKTIKMWEVATGYCVKTLTG----------HRE-WVRQIKVSPDGTL-LASCSNDHTA 256 (406)
Q Consensus 194 ~~~~~~----p~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~----------~~~-~v~~l~~~~~~~~-l~s~~~d~~v 256 (406)
..++|+ |+|+++++++. +++|.++|..+.+.++.+.. |.. .+..+..++++.. +++...+|.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 789999 69998877654 58999999999988877642 222 5778888888655 4555677999
Q ss_pred EEEeCCCccceeE-EecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEEEEECCCCeEEEEEeC--
Q psy226 257 RVWSLATKETKAE-LRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIKLWDVGSGSLLFTLIG-- 332 (406)
Q Consensus 257 ~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~-- 332 (406)
.++|......... ..........+.|+| +++++++++ .++.|.++|+.+++.+..+.-
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~p------------------dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg 384 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDG------------------SHRYFITAANARNKLVVIDTKEGKLVAIEDTGG 384 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECT------------------TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred EEEecCCCccceeeeeeccccccCceECC------------------CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccC
Confidence 9999876432211 111223345667776 466665555 678999999999988766543
Q ss_pred ---CCcCEEEEEEcCCCCEE-EEEe-CCCeEEEEeCCC-------CccceeeccccceEEEEEEeCCCCEEEEeeC----
Q psy226 333 ---HDNWVRGVTFHPGGKYL-VSCG-DDKTLRVWDTAN-------KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV---- 396 (406)
Q Consensus 333 ---h~~~v~~l~~s~~g~~l-~sgs-~d~~i~vwd~~~-------~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~---- 396 (406)
|.+.-..+ ++|++..+ +++. .+++|.++|..+ .+.++++......-.-+..||++++|.+...
T Consensus 385 ~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~ 463 (567)
T 1qks_A 385 QTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE 463 (567)
T ss_dssp SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS
T ss_pred cCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCC
Confidence 43222222 68875544 4443 468999999987 4566776654332234668999999877552
Q ss_pred ---CCeEEEeec
Q psy226 397 ---DKTVKVWEC 405 (406)
Q Consensus 397 ---Dg~v~iw~~ 405 (406)
..+|.++|.
T Consensus 464 ~~~~~~v~v~d~ 475 (567)
T 1qks_A 464 AEISGSVAVFDI 475 (567)
T ss_dssp HHHHTCEEEEEG
T ss_pred cccCceEEEEEC
Confidence 358999885
No 197
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.74 E-value=6.7e-16 Score=156.95 Aligned_cols=268 Identities=15% Similarity=0.047 Sum_probs=176.8
Q ss_pred CCCCEEEEEeCCCc---EEEEE--cC---CCcEEEEe------cccccCeeeEEECCCCCEEEEEeCC-----CcEEEEe
Q psy226 116 PVFSLMASCSEDAT---IRLWD--YE---TGEYERAL------HGHLDSVQDIAFDQSGKLLVSCSAD-----MSLKLWD 176 (406)
Q Consensus 116 p~~~~latgs~dg~---v~vwd--~~---~~~~~~~~------~~h~~~V~~l~~~~~g~~l~sgs~d-----~~i~vwd 176 (406)
|+|.+++-...++. -.+|- .. +++....+ .+|...+.+++|+|||++|+.++.+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 77877776554433 44554 33 34333322 2344468899999999999887654 4699999
Q ss_pred CCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCc--------------EEEEEcCCCe----EEEEeecCCccEEEE
Q psy226 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT--------------IKMWEVATGY----CVKTLTGHREWVRQI 238 (406)
Q Consensus 177 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~--------------i~iwd~~~~~----~~~~~~~~~~~v~~l 238 (406)
+.+++.+.. ..+...+..++|+|+ +.|+.++.|+. |++|++.++. .+.....+..++..+
T Consensus 196 l~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 196 VADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp TTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 999887543 222223457899999 98888887654 8899997765 222222344468899
Q ss_pred EECCCCCEEEEEeCCC-----eEEEEeCCCc--cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe
Q psy226 239 KVSPDGTLLASCSNDH-----TARVWSLATK--ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS 311 (406)
Q Consensus 239 ~~~~~~~~l~s~~~d~-----~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 311 (406)
.|+|||++|+..+.++ .|++||+.++ .....+..+...+....+ | +|..|+..+
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~------------------dg~~l~~~s 334 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD-G------------------VGDQLWFVS 334 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE-E------------------ETTEEEEEE
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe-c------------------cCCEEEEEE
Confidence 9999999988877544 8999999775 313444444433333322 3 355666666
Q ss_pred CC----CcEEEEECCCC--eEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCccceeecc-ccceEEEEE
Q psy226 312 RD----KTIKLWDVGSG--SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEA-HSHFVTSLD 383 (406)
Q Consensus 312 ~d----~~i~lwd~~~~--~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~-~~~~~~~l~~-h~~~v~~l~ 383 (406)
.+ +.|.+||+.++ .....+..+...+..++|+ ++.++++...|+..+||.+. ++...+.+.. +...+..++
T Consensus 335 ~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~ 413 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLS 413 (741)
T ss_dssp CTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEE
T ss_pred CCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEee
Confidence 53 45999999875 3333344555567778887 66788888999988777554 3555566654 356789999
Q ss_pred EeCCCCEEE----EeeCCCeEEEeec
Q psy226 384 FHRAHPYVV----TGSVDKTVKVWEC 405 (406)
Q Consensus 384 ~~~~~~~l~----sgs~Dg~v~iw~~ 405 (406)
++|++..|+ +....++|.+||+
T Consensus 414 ~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 414 GRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp CCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred cCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 999988665 3334578888885
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.72 E-value=1.4e-14 Score=131.31 Aligned_cols=237 Identities=11% Similarity=0.113 Sum_probs=166.1
Q ss_pred cccCeeeEEECCCCCEEEE-------EeCCCcEEEEeCCCCeEEEEEe----cCCcceEEEEEecC-CCEEEEEeCCCcE
Q psy226 147 HLDSVQDIAFDQSGKLLVS-------CSADMSLKLWDMSTYQCLKTMQ----GHDHNVTGVAFLPN-SDFVLSASRDKTI 214 (406)
Q Consensus 147 h~~~V~~l~~~~~g~~l~s-------gs~d~~i~vwd~~~~~~~~~~~----~h~~~v~~~~~~p~-~~~l~s~s~d~~i 214 (406)
......+++|+++|.++++ +..++.|.+||..+++...... ++...+.+++++++ ++++++ +..+.|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~~~~~l 94 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVA-DMRLGL 94 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEE-ETTTEE
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEE-ECCCCE
Confidence 3445678999999988877 5778899999988776543221 24467889999998 654444 445579
Q ss_pred EEEEcCCCeEEEE-eec----CCccEEEEEECCCCCEEEEEeCC---------------CeEEEEeCCCccceeEEecCC
Q psy226 215 KMWEVATGYCVKT-LTG----HREWVRQIKVSPDGTLLASCSND---------------HTARVWSLATKETKAELRGHD 274 (406)
Q Consensus 215 ~iwd~~~~~~~~~-~~~----~~~~v~~l~~~~~~~~l~s~~~d---------------~~v~vwd~~~~~~~~~~~~~~ 274 (406)
.+||.. +..... ... ....+..++++++|+++++...+ +.|..||.. ++.. .+..+.
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~ 171 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QVDTAF 171 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EEEEEE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-EeccCC
Confidence 999988 654332 211 12357899999999988877655 567777765 3322 222222
Q ss_pred ceEEEEEeC----CCCCccccccccCCCCCCCCCCEE-EEEeCCCcEEEEECC-CCe-----EEEEEeCCC-cCEEEEEE
Q psy226 275 HTVECVAWA----PGVASESISEAAGRPPGQGGGPYL-ATGSRDKTIKLWDVG-SGS-----LLFTLIGHD-NWVRGVTF 342 (406)
Q Consensus 275 ~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~lwd~~-~~~-----~~~~~~~h~-~~v~~l~~ 342 (406)
.....++++ | ++..+ ++...++.|.+||.. ++. ....+.++. ..+..+++
T Consensus 172 ~~~~~i~~~~~~d~------------------dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~ 233 (314)
T 1pjx_A 172 QFPNGIAVRHMNDG------------------RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDF 233 (314)
T ss_dssp SSEEEEEEEECTTS------------------CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEE
T ss_pred CCcceEEEecccCC------------------CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEE
Confidence 334566666 5 34344 444567899999976 454 223344444 56889999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCE-EEEeeCCCeEEEeec
Q psy226 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY-VVTGSVDKTVKVWEC 405 (406)
Q Consensus 343 s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~-l~sgs~Dg~v~iw~~ 405 (406)
+++|+++++...++.|.+||..+++.+..+..+...+.+++|+|++.. .++...++.|..|+.
T Consensus 234 d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 234 DEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp BTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 999999888888899999999877777777767678999999999994 455566788988875
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.72 E-value=1e-13 Score=128.75 Aligned_cols=265 Identities=9% Similarity=-0.013 Sum_probs=179.4
Q ss_pred cCCCCEEEEEeC--CC---cEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe----------CCCcEEEEeCCC
Q psy226 115 HPVFSLMASCSE--DA---TIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS----------ADMSLKLWDMST 179 (406)
Q Consensus 115 ~p~~~~latgs~--dg---~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs----------~d~~i~vwd~~~ 179 (406)
.|++..+.+... .+ +|.++|..+++....+.....+ .++++|||++|+++. .++.|.+||..+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 356665555543 22 8899999999988877654444 999999999999886 367899999998
Q ss_pred CeEEEEEecC-------CcceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEE-eecCCccEEEEEECCCC-CEEE
Q psy226 180 YQCLKTMQGH-------DHNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKT-LTGHREWVRQIKVSPDG-TLLA 248 (406)
Q Consensus 180 ~~~~~~~~~h-------~~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~ 248 (406)
++.+..+... ...-..+.|+|+|++|++++. ++.|.++| .+++.+.. +.... ++.+.|++ ..++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~ 181 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFY 181 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEE
Confidence 8877665432 123457899999999998874 57899999 99988777 54321 23445554 4567
Q ss_pred EEeCCCeEEEEeCCCccceeEEec-----CCceE-EEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECC
Q psy226 249 SCSNDHTARVWSLATKETKAELRG-----HDHTV-ECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG 322 (406)
Q Consensus 249 s~~~d~~v~vwd~~~~~~~~~~~~-----~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~ 322 (406)
+.+.||.+.++|. +++....... ...++ ....+.+ .++.++++ +.++.+.+.|+.
T Consensus 182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~-----------------~~~~~~~~-~~~~~v~vid~~ 242 (373)
T 2mad_H 182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN-----------------KSGRIVWP-VYSGKILQADIS 242 (373)
T ss_pred EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe-----------------cCCEEEEE-cCCceEEEEecc
Confidence 7788999999999 6654422110 00000 0011111 12233333 367889999986
Q ss_pred CCe--EEEEEeC----------CCcCEEEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCccceeeccccceEE
Q psy226 323 SGS--LLFTLIG----------HDNWVRGVTFHPGGKYLVSCGD----------DKTLRVWDTANKRNMKTLEAHSHFVT 380 (406)
Q Consensus 323 ~~~--~~~~~~~----------h~~~v~~l~~s~~g~~l~sgs~----------d~~i~vwd~~~~~~~~~l~~h~~~v~ 380 (406)
.+. .+..+.- .......+.++|+++.++.+.. ++.|.++|..+++.++++..- ....
T Consensus 243 ~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~ 321 (373)
T 2mad_H 243 AAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVD 321 (373)
T ss_pred CCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcC
Confidence 542 2222210 1122445789999998877653 358999999999998888543 3578
Q ss_pred EEEEeCCCC-EEEEee-CCCeEEEeecC
Q psy226 381 SLDFHRAHP-YVVTGS-VDKTVKVWECR 406 (406)
Q Consensus 381 ~l~~~~~~~-~l~sgs-~Dg~v~iw~~~ 406 (406)
.++|+|+++ +++++. .++.|.+||..
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 999999999 777776 58999999963
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.72 E-value=9.5e-15 Score=133.62 Aligned_cols=249 Identities=12% Similarity=0.021 Sum_probs=178.5
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEec
Q psy226 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG 188 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~ 188 (406)
...+++. .+.++++...++.|.+||..+++....+. .......++++++++..++...++.|.+||..+++....+..
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~ 123 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC 123 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc
Confidence 4566664 35566677778999999999999888775 346788999988885444444889999999999988777654
Q ss_pred CC-----cceEEEEEecCCCEEEEEe--CCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCC--------
Q psy226 189 HD-----HNVTGVAFLPNSDFVLSAS--RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND-------- 253 (406)
Q Consensus 189 h~-----~~v~~~~~~p~~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-------- 253 (406)
.. .....+++ . ++.++++. .+++|.++|..++..+..+.... ....++++|+|++++++..+
T Consensus 124 g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 124 PDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp TTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred CCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccCCcccc
Confidence 33 14456777 3 44555544 48899999999998887776433 34678899999988777665
Q ss_pred --CeEEEEeCCCccceeEEecC-CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEE-E
Q psy226 254 --HTARVWSLATKETKAELRGH-DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF-T 329 (406)
Q Consensus 254 --~~v~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~-~ 329 (406)
+.|.++|..+.+....+... ......++++|+ +..++++.. .|.+||..+++... .
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d------------------~~~lyv~~~--~v~~~d~~t~~~~~~~ 260 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGT------------------RDTLYWINN--DIWRMPVEADRVPVRP 260 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTT------------------SCEEEEESS--SEEEEETTCSSCCSSC
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEecC------------------CCEEEEEcc--EEEEEECCCCceeeee
Confidence 79999999887765555422 235677888873 556666544 89999998877532 1
Q ss_pred -EeCCCcCEEEEEEcC-CCCEEEEE----eCCCeEEEEeCCCCccceeeccccceEEEEEE
Q psy226 330 -LIGHDNWVRGVTFHP-GGKYLVSC----GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384 (406)
Q Consensus 330 -~~~h~~~v~~l~~s~-~g~~l~sg----s~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 384 (406)
+..+.....+++++| ++...++. ..++.|.+||.. ++.+.++..- ..-..++|
T Consensus 261 ~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G-~~P~~~~~ 319 (328)
T 3dsm_A 261 FLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVG-IIPGAFCW 319 (328)
T ss_dssp SBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEE-ESEEEEEE
T ss_pred eecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEec-cCcceEEE
Confidence 111245688999999 55666666 678999999998 8888877542 23455555
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.71 E-value=1.5e-15 Score=154.46 Aligned_cols=242 Identities=15% Similarity=0.096 Sum_probs=166.7
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCc-------
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSED-----ATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS------- 171 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~d-----g~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~------- 171 (406)
+|...+..++|||||++||.++.+ .+|++||+.+++.... ..+...+.+++|+|| +.|+.++.|+.
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccc
Confidence 344468889999999999877654 3599999999987543 212223468999999 99988887654
Q ss_pred -------EEEEeCCCCeE--EEEEe--cCCcceEEEEEecCCCEEEEEeCCC-----cEEEEEcCCC--eEEEEeecCCc
Q psy226 172 -------LKLWDMSTYQC--LKTMQ--GHDHNVTGVAFLPNSDFVLSASRDK-----TIKMWEVATG--YCVKTLTGHRE 233 (406)
Q Consensus 172 -------i~vwd~~~~~~--~~~~~--~h~~~v~~~~~~p~~~~l~s~s~d~-----~i~iwd~~~~--~~~~~~~~~~~ 233 (406)
|++|++.+++. ...+. .+...+.++.|+|+|++|+..+.++ .|.+||+.++ .+...+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 88999876541 22222 2333588999999999888777544 8999999877 31455555555
Q ss_pred cEEEEEECCCCCEEEEEeCC----CeEEEEeCCCc--cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEE
Q psy226 234 WVRQIKVSPDGTLLASCSND----HTARVWSLATK--ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYL 307 (406)
Q Consensus 234 ~v~~l~~~~~~~~l~s~~~d----~~v~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 307 (406)
.+.... +|+|..|+..+.+ +.|.+||+.+. .....+..+...+..+.+. ++.++
T Consensus 318 ~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-------------------~~~lv 377 (741)
T 1yr2_A 318 AQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-------------------GNRLF 377 (741)
T ss_dssp SCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-------------------BTEEE
T ss_pred ceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-------------------CCEEE
Confidence 454443 4899988887764 45999998774 2233344444555566554 24578
Q ss_pred EEEeCCCcEEEEECC-CCeEEEEEeC-CCcCEEEEEEcCCCCEEE-EEe---CCCeEEEEeCCCCc
Q psy226 308 ATGSRDKTIKLWDVG-SGSLLFTLIG-HDNWVRGVTFHPGGKYLV-SCG---DDKTLRVWDTANKR 367 (406)
Q Consensus 308 ~s~~~d~~i~lwd~~-~~~~~~~~~~-h~~~v~~l~~s~~g~~l~-sgs---~d~~i~vwd~~~~~ 367 (406)
++...|+..+||.+. ++.....+.. +...+..++++|+++.|+ +.+ ..++|++||+.+++
T Consensus 378 ~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 378 ASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 888889987777543 4566666654 356789999999987655 322 34789999998765
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.71 E-value=2.3e-14 Score=129.73 Aligned_cols=242 Identities=10% Similarity=0.106 Sum_probs=169.0
Q ss_pred eccCCCCeEEEEEcCCCCEEEE-------EeCCCcEEEEEcCCCcEEEEec----ccccCeeeEEECCC-CCEEEEEeCC
Q psy226 102 LSGHRSPVIKVIFHPVFSLMAS-------CSEDATIRLWDYETGEYERALH----GHLDSVQDIAFDQS-GKLLVSCSAD 169 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~~lat-------gs~dg~v~vwd~~~~~~~~~~~----~h~~~V~~l~~~~~-g~~l~sgs~d 169 (406)
+...-....+++|++++.++++ +..++.|.+||..+++...... ++...+.+++++++ |+++++.. .
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~ 91 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-R 91 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-T
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-C
Confidence 3444455678999999998888 6788999999988887654332 25567899999999 66555544 4
Q ss_pred CcEEEEeCCCCeEEEE-Eec----CCcceEEEEEecCCCEEEEEeCC---------------CcEEEEEcCCCeEEEEee
Q psy226 170 MSLKLWDMSTYQCLKT-MQG----HDHNVTGVAFLPNSDFVLSASRD---------------KTIKMWEVATGYCVKTLT 229 (406)
Q Consensus 170 ~~i~vwd~~~~~~~~~-~~~----h~~~v~~~~~~p~~~~l~s~s~d---------------~~i~iwd~~~~~~~~~~~ 229 (406)
..|.+||.. ++.... ... ....+.++++.|+++++++...+ +.|..||.. +.... +.
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VD 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-ec
Confidence 478899988 664332 211 12357899999999887776655 567777765 54433 22
Q ss_pred cCCccEEEEEEC----CCCCEE-EEEeCCCeEEEEeCC-Ccc-----ceeEEecCC-ceEEEEEeCCCCCccccccccCC
Q psy226 230 GHREWVRQIKVS----PDGTLL-ASCSNDHTARVWSLA-TKE-----TKAELRGHD-HTVECVAWAPGVASESISEAAGR 297 (406)
Q Consensus 230 ~~~~~v~~l~~~----~~~~~l-~s~~~d~~v~vwd~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~ 297 (406)
.+......++++ |+++.+ ++...++.|.+||+. .+. ....+..+. ..+..+++.+
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~------------- 235 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE------------- 235 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT-------------
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC-------------
Confidence 333456789999 999655 444578999999976 222 111222232 4456666665
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEE-EEeCCCeEEEEeCCC
Q psy226 298 PPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV-SCGDDKTLRVWDTAN 365 (406)
Q Consensus 298 ~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~-sgs~d~~i~vwd~~~ 365 (406)
+|.++++...++.|.+||..+++.+..+..+...+.+++|+|+|+.|+ +...++.|..|+...
T Consensus 236 -----~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 236 -----DNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp -----TCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred -----CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 466777777888999999987776666666767899999999999555 455668999999864
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.70 E-value=1.3e-13 Score=123.73 Aligned_cols=239 Identities=9% Similarity=-0.007 Sum_probs=171.9
Q ss_pred cccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE-ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe
Q psy226 145 HGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM-QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223 (406)
Q Consensus 145 ~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~ 223 (406)
..+...+.+++++++|++.++...++.|.+||.. ++..... ..+...+.++++.+++.++++...++.|..||.....
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 89 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKKGII 89 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE
Confidence 3455678999999999988877668899999988 5433222 2345678999999999988877778899999976322
Q ss_pred EEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeE-EecCCceEEEEEeCCCCCccccccccCCCCCCC
Q psy226 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE-LRGHDHTVECVAWAPGVASESISEAAGRPPGQG 302 (406)
Q Consensus 224 ~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (406)
....+......+..++++++|.++++...++.|.+||. ++..... .......+..+++.+
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~------------------ 150 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGS------------------ 150 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECT------------------
T ss_pred EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcC------------------
Confidence 12222224557889999999998888878899999998 4333221 222334566777665
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEE-EeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccce-eeccccceEE
Q psy226 303 GGPYLATGSRDKTIKLWDVGSGSLLFT-LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK-TLEAHSHFVT 380 (406)
Q Consensus 303 ~~~~l~s~~~d~~i~lwd~~~~~~~~~-~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~-~l~~h~~~v~ 380 (406)
++.+.++...++.|..||. +++.... +..+...+.+++++++|+..++...++.|.+||. +++... .+..+...+.
T Consensus 151 ~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 228 (299)
T 2z2n_A 151 DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPH 228 (299)
T ss_dssp TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEE
T ss_pred CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCce
Confidence 3556666666789999999 6665432 3344567889999999998777777889999998 555322 1233445789
Q ss_pred EEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 381 SLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 381 ~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
++++++++.+.++...++.|..||.
T Consensus 229 ~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 229 AITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEECSTTCEEEEETTTTEEEEEET
T ss_pred eEEECCCCCEEEeccCCceEEEECC
Confidence 9999999998777767888988874
No 204
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=3.5e-14 Score=130.62 Aligned_cols=273 Identities=13% Similarity=0.103 Sum_probs=185.5
Q ss_pred EEcCCCCEEEEEeC-----CCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe----------CCCcEEEEeC
Q psy226 113 IFHPVFSLMASCSE-----DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS----------ADMSLKLWDM 177 (406)
Q Consensus 113 ~~~p~~~~latgs~-----dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs----------~d~~i~vwd~ 177 (406)
...|++..++.... ++.|.+.|..+++....+.....+ .++++|+|+++++++ .++.|.+||.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34577777776655 689999999999998888755455 499999999888775 3678999999
Q ss_pred CCCeEEEEEecCC-------cceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEE
Q psy226 178 STYQCLKTMQGHD-------HNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLA 248 (406)
Q Consensus 178 ~~~~~~~~~~~h~-------~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~ 248 (406)
.+++.+.++.... ..-..+.|+|+|++++++.. +++|.++|+.+++.+.++..... ...+....+.++
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc---ceeecCCCceeE
Confidence 9999888775321 23456899999999888764 68999999999998888753221 122333456777
Q ss_pred EEeCCCeEEEEeCCC-ccceeEEecCCceEEEEEeCCCCCccccccccCCCCC-CCCCCEEEEEeCCCcEEEEECCCCeE
Q psy226 249 SCSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAGRPPG-QGGGPYLATGSRDKTIKLWDVGSGSL 326 (406)
Q Consensus 249 s~~~d~~v~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~s~~~d~~i~lwd~~~~~~ 326 (406)
+.+.||.+.+.++.+ +........ .+.+.... + ...+.. ..+|.+++ .+.+|.|.+.|+.++..
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~--------~~~~~~~~--~---~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~ 259 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTE--------VFHPEDEF--L---INHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDA 259 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECC--------CCSCTTSC--B---CSCCEEETTTTEEEE-EBTTSEEEEEECTTSSC
T ss_pred EECCCCCEEEEECCCCCeEEEeecc--------eecccccc--c---cccceeEcCCCcEEE-EeCCCEEEEEECCCCcc
Confidence 888899999999876 332211100 11111000 0 000000 12354444 55689999999976542
Q ss_pred --EEEEe---------C-CCcCEEEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCccceeeccccceEEEEEE
Q psy226 327 --LFTLI---------G-HDNWVRGVTFHPGGKYLVSCGD----------DKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384 (406)
Q Consensus 327 --~~~~~---------~-h~~~v~~l~~s~~g~~l~sgs~----------d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 384 (406)
+..+. + .......++++|+++.++..-. .+.|.+.|..+++.++.+..- ..+..|++
T Consensus 260 ~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lav 338 (386)
T 3sjl_D 260 KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINV 338 (386)
T ss_dssp EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEE
T ss_pred eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEE
Confidence 22221 0 1122345778999988877542 257999999999999888643 36889999
Q ss_pred eCCCC-EEEE-eeCCCeEEEeec
Q psy226 385 HRAHP-YVVT-GSVDKTVKVWEC 405 (406)
Q Consensus 385 ~~~~~-~l~s-gs~Dg~v~iw~~ 405 (406)
+++++ +|.+ ...++.|.++|.
T Consensus 339 s~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 339 SQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp CSSSSCEEEEEETTTTEEEEEET
T ss_pred CCCCCeEEEEEcCCCCeEEEEEC
Confidence 99996 5555 566899999986
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=2e-13 Score=128.50 Aligned_cols=234 Identities=12% Similarity=0.148 Sum_probs=166.8
Q ss_pred CeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCC--cEEEEEcCCCeEEEE
Q psy226 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK--TIKMWEVATGYCVKT 227 (406)
Q Consensus 150 ~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~--~i~iwd~~~~~~~~~ 227 (406)
....|+|+++|+++++...++.|++||..+++......... ... ++|+|+++.|+++..++ .|.+++...+.....
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 56789999999988877778999999998877655544433 333 99999999998888766 788898877655444
Q ss_pred e----ecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeE----EecCCceE--EEEEeCCCCCccccccccCC
Q psy226 228 L----TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE----LRGHDHTV--ECVAWAPGVASESISEAAGR 297 (406)
Q Consensus 228 ~----~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~----~~~~~~~v--~~~~~~~~~~~~~~~~~~~~ 297 (406)
+ ......+..++++|++..|+.+..++.|+.||..+...... ..++.... ..++|+|.
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~------------ 277 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFV------------ 277 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETT------------
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCC------------
Confidence 4 22445678899999555555577789999999876543221 11111111 15666652
Q ss_pred CCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC---------------cCEEEEEEcCCCCEEEEEe-CCCeEEEE
Q psy226 298 PPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD---------------NWVRGVTFHPGGKYLVSCG-DDKTLRVW 361 (406)
Q Consensus 298 ~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~---------------~~v~~l~~s~~g~~l~sgs-~d~~i~vw 361 (406)
++.++++-..++.|+.|+.... +..+.++. .....++++|+|+++++-+ .+++|+.|
T Consensus 278 -----~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~ 350 (409)
T 3hrp_A 278 -----DSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKL 350 (409)
T ss_dssp -----TTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEE
T ss_pred -----CCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEE
Confidence 3556666667888999987543 33343332 4588999999999888887 89999999
Q ss_pred eCCCCccceeeccc---------------cceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 362 DTANKRNMKTLEAH---------------SHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 362 d~~~~~~~~~l~~h---------------~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
|..++. +.++.++ -.....|++++++.++++...+++|+.+++
T Consensus 351 ~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 351 DILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred ECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 977665 3344333 235789999999988899889999988765
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.66 E-value=1.5e-13 Score=129.44 Aligned_cols=234 Identities=12% Similarity=0.104 Sum_probs=167.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCC--cEEEEeCCCCeEEE
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADM--SLKLWDMSTYQCLK 184 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~--~i~vwd~~~~~~~~ 184 (406)
.....++++|+++++++...++.|++||..++......... .... ++|+++++.|+++..++ .|.+|+..++....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 35778999999998888888899999999988776655442 2333 99999999999988866 78888876544333
Q ss_pred EE----ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEE----eecCCccE--EEEEECCC-CCEEEEEeCC
Q psy226 185 TM----QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKT----LTGHREWV--RQIKVSPD-GTLLASCSND 253 (406)
Q Consensus 185 ~~----~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~----~~~~~~~v--~~l~~~~~-~~~l~s~~~d 253 (406)
.+ ......+.+++++|++..|+.+..++.|..||..++..... ..++.... ..++|+|+ +.++++-..+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 21345678899999656666677788999999987754332 22222222 28999995 6666777778
Q ss_pred CeEEEEeCCCccceeEEecCC---------------ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEE
Q psy226 254 HTARVWSLATKETKAELRGHD---------------HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIK 317 (406)
Q Consensus 254 ~~v~vwd~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~ 317 (406)
+.|+.|+.... ...+.++. .....+++.| +|.++++-+ .++.|+
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~------------------dG~lyvad~~~~~~I~ 348 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDE------------------DGNFYIVDGFKGYCLR 348 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECT------------------TCCEEEEETTTTCEEE
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeC------------------CCCEEEEeCCCCCEEE
Confidence 99999997643 22333321 2245566655 466677777 788999
Q ss_pred EEECCCCeEEEEEeCC---------------CcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy226 318 LWDVGSGSLLFTLIGH---------------DNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363 (406)
Q Consensus 318 lwd~~~~~~~~~~~~h---------------~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~ 363 (406)
.||+.++.. .++.++ -.....++++|+|.++++-..+++|+.+++
T Consensus 349 ~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 349 KLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999877764 444444 246899999999988888888899988765
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.63 E-value=1.5e-12 Score=117.21 Aligned_cols=226 Identities=16% Similarity=0.213 Sum_probs=155.9
Q ss_pred cccCeeeEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEE
Q psy226 147 HLDSVQDIAFDQSG-KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV 225 (406)
Q Consensus 147 h~~~V~~l~~~~~g-~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~ 225 (406)
+..-..+..|++++ .++++...++.|..||..+++. ..+ .....+.+++++|+++++++ . ++.|.+||..++...
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV 86 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE
Confidence 33445678899854 5566666788999999987764 233 24567999999999995554 4 567999999887654
Q ss_pred EEeec----CCccEEEEEECCCCCEEEEEeCC---------CeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccc
Q psy226 226 KTLTG----HREWVRQIKVSPDGTLLASCSND---------HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292 (406)
Q Consensus 226 ~~~~~----~~~~v~~l~~~~~~~~l~s~~~d---------~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 292 (406)
..... ....++.++++|+|+++++...+ ..-.+|.+........+..+......++|+|+
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spd------- 159 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLD------- 159 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTT-------
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCC-------
Confidence 33322 12357889999999977765322 23345554432222223333344567888873
Q ss_pred cccCCCCCCCCCCEE-EEEeCCCcEEEEEC--CCCeE-----EEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy226 293 EAAGRPPGQGGGPYL-ATGSRDKTIKLWDV--GSGSL-----LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 293 ~~~~~~~~~~~~~~l-~s~~~d~~i~lwd~--~~~~~-----~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~ 364 (406)
+..| ++.+.++.|..||+ .++.. ...+..+......++++++|++.++...++.|.+||..
T Consensus 160 -----------g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 160 -----------HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp -----------SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred -----------CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 4444 55566788999987 45543 22333344568899999999988888888999999999
Q ss_pred CCccceeeccccceEEEEEEe-CCCCEEEEe
Q psy226 365 NKRNMKTLEAHSHFVTSLDFH-RAHPYVVTG 394 (406)
Q Consensus 365 ~~~~~~~l~~h~~~v~~l~~~-~~~~~l~sg 394 (406)
+++.+..+..+...+++++|. |+++.|..+
T Consensus 229 tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 229 TGKRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp TCCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred CceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 899888888777789999998 887766443
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=5.7e-12 Score=112.88 Aligned_cols=236 Identities=11% Similarity=0.011 Sum_probs=169.0
Q ss_pred cccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEE
Q psy226 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK-TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV 225 (406)
Q Consensus 147 h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~ 225 (406)
....+.+++++++|++.++...++.|.+||.. ++... .+......+.++++.+++.++++...++.|..+|.. +...
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE
Confidence 44578899999999988877778999999987 55433 222234578899999999887777668899999987 5443
Q ss_pred E-EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCcccee-EEecCCceEEEEEeCCCCCccccccccCCCCCCCC
Q psy226 226 K-TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA-ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGG 303 (406)
Q Consensus 226 ~-~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (406)
. .+......+..++++++|+++++...++.|..+|.. ++... .+......+..+++.+ +
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~------------------~ 156 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGS------------------D 156 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT------------------T
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECC------------------C
Confidence 2 222234668899999999988888778899999986 43321 1222334566676665 3
Q ss_pred CCEEEEEeCCCcEEEEECCCCeEEE-EEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccce-eeccccceEEE
Q psy226 304 GPYLATGSRDKTIKLWDVGSGSLLF-TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK-TLEAHSHFVTS 381 (406)
Q Consensus 304 ~~~l~s~~~d~~i~lwd~~~~~~~~-~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~-~l~~h~~~v~~ 381 (406)
+.+.++...++.|..||. +++... ....+...+.+++++++|...++....+.|.+||. +++... .+..+...+.+
T Consensus 157 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 234 (300)
T 2qc5_A 157 NALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHA 234 (300)
T ss_dssp SSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred CCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceE
Confidence 555666656788999998 555443 22344567899999999988887777789999998 444322 22334456889
Q ss_pred EEEeCCCCEEEEeeCCCeEEEeec
Q psy226 382 LDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 382 l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+++++++.+.++...++.|..|+.
T Consensus 235 i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 235 ITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EEECSTTCEEEEETTTTEEEEECT
T ss_pred EEECCCCCEEEeccCCCeEEEECC
Confidence 999999998777767788888874
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.61 E-value=1.4e-12 Score=117.50 Aligned_cols=225 Identities=12% Similarity=0.070 Sum_probs=154.8
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 108 PVIKVIFHPV-FSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 108 ~V~~v~~~p~-~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
---+..|+|+ +.++++...++.|..||..+++... + .....+.+++++++|+++++ . +..|.+||..+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 3457889995 5577777788999999999887532 2 23467999999999995554 4 567999999887653322
Q ss_pred ec----CCcceEEEEEecCCCEEEEEeCC---------CcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE-EEEeC
Q psy226 187 QG----HDHNVTGVAFLPNSDFVLSASRD---------KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL-ASCSN 252 (406)
Q Consensus 187 ~~----h~~~v~~~~~~p~~~~l~s~s~d---------~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~ 252 (406)
.. ....+..+++.|+|+++++...+ ..-.+|.+........+..+....+.++|+|+++.+ ++.+.
T Consensus 90 ~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL 169 (297)
T ss_dssp ECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG
T ss_pred ecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCC
Confidence 21 12357889999999976654322 334566554322223333344556889999999866 55566
Q ss_pred CCeEEEEeCC--Cccce-----eEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe
Q psy226 253 DHTARVWSLA--TKETK-----AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS 325 (406)
Q Consensus 253 d~~v~vwd~~--~~~~~-----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~ 325 (406)
++.|.+|++. ++... ..+..+......+++.+ +|.+.++...++.|..||..+++
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~------------------~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA------------------EGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT------------------TSCEEEEEETTTEEEEECTTTCC
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC------------------CCCEEEEEcCCCEEEEEcCCCce
Confidence 8899999873 33221 11222234456666655 46677777778889999999899
Q ss_pred EEEEEeCCCcCEEEEEEc-CCCCEEEEEeC
Q psy226 326 LLFTLIGHDNWVRGVTFH-PGGKYLVSCGD 354 (406)
Q Consensus 326 ~~~~~~~h~~~v~~l~~s-~~g~~l~sgs~ 354 (406)
.+..+..+...+++++|. |+++.|+.++.
T Consensus 232 ~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 232 RLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 988888777789999998 88887765553
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.61 E-value=1.9e-13 Score=128.01 Aligned_cols=259 Identities=12% Similarity=0.087 Sum_probs=174.2
Q ss_pred CcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEecC-------C
Q psy226 128 ATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS----------ADMSLKLWDMSTYQCLKTMQGH-------D 190 (406)
Q Consensus 128 g~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs----------~d~~i~vwd~~~~~~~~~~~~h-------~ 190 (406)
++|.++|..+++.+..+.....+ .++++|||++|+++. .++.|.++|..+++.+.++.-. .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 79999999999999888755555 899999999888876 3678999999999988776532 1
Q ss_pred cceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEeCCCccce
Q psy226 191 HNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLATKETK 267 (406)
Q Consensus 191 ~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~ 267 (406)
.....+.|+|+|++++++.. +++|.+.|+.+++.+..+.-... ....|++ ..+++.+.||.+.+.++.+.+..
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~ 252 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETK 252 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCE
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEE
Confidence 23456899999999998874 57899999999998887764221 2233433 56677778888888887444332
Q ss_pred eEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEE--EEe--C-C-------Cc
Q psy226 268 AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF--TLI--G-H-------DN 335 (406)
Q Consensus 268 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~--~~~--~-h-------~~ 335 (406)
.... + .+...... ..........+..++..+..+.|.+.|...+.... .+. . . ..
T Consensus 253 ~~~~-~-------~~~v~~~p-----~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 253 VTNT-E-------VFHTEDEL-----LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp EEEC-C-------CCSCTTSC-----BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred EEee-e-------eeccCCCc-----eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 1110 0 00000000 00000001123444445667899999986554321 110 0 0 01
Q ss_pred CEEEEEEcCCCCEEEEEeC----------CCeEEEEeCCCCccceeeccccceEEEEEEeCCCC-EEEEee-CCCeEEEe
Q psy226 336 WVRGVTFHPGGKYLVSCGD----------DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP-YVVTGS-VDKTVKVW 403 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~----------d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~-~l~sgs-~Dg~v~iw 403 (406)
....++++|+++.++.... ++.|.++|..+.+.++++..- .....++|+|+++ ++++.. .++.|.++
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 1123689999887766532 357999999999999988643 3578999999999 887777 59999999
Q ss_pred ecC
Q psy226 404 ECR 406 (406)
Q Consensus 404 ~~~ 406 (406)
|..
T Consensus 399 D~~ 401 (426)
T 3c75_H 399 DAA 401 (426)
T ss_dssp ETT
T ss_pred ECC
Confidence 963
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=7.1e-12 Score=116.37 Aligned_cols=247 Identities=9% Similarity=-0.052 Sum_probs=161.7
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEEcCCCcEEEEeccc-------ccCeeeEEECCCCCEEEEEeC--CCc
Q psy226 111 KVIFHPVFSLMASCS----------EDATIRLWDYETGEYERALHGH-------LDSVQDIAFDQSGKLLVSCSA--DMS 171 (406)
Q Consensus 111 ~v~~~p~~~~latgs----------~dg~v~vwd~~~~~~~~~~~~h-------~~~V~~l~~~~~g~~l~sgs~--d~~ 171 (406)
.++|+|+++.++.+. .++.|.+||..+.+....+.-. ......++|+|+|++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998886 3688999999998877665421 123457999999999998874 478
Q ss_pred EEEEeCCCCeEEEE-EecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCCCeEEEEee-----cCCcc-EEEEEECCC
Q psy226 172 LKLWDMSTYQCLKT-MQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTLT-----GHREW-VRQIKVSPD 243 (406)
Q Consensus 172 i~vwd~~~~~~~~~-~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~-----~~~~~-v~~l~~~~~ 243 (406)
|.++| .+++.+.. +.... ++.+.|++. .+++.+.||.+.++|. ++....... ....+ .....+.++
T Consensus 150 v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 99988766 54221 245566653 5566778999999999 876653321 11111 122445666
Q ss_pred CCEEEEEeCCCeEEEEeCCCccce--eEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC---------
Q psy226 244 GTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR--------- 312 (406)
Q Consensus 244 ~~~l~s~~~d~~v~vwd~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~--------- 312 (406)
+..++..+.++.+.+.|+...... ..+...........|.|..... .. ...++..++++..
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~----~~----~s~d~~~lyV~~~~~~~~~~~~ 295 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQ----VA----YLKSSDGIYLLTSEQSAWKLHA 295 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEe----EE----ECCCCCEEEEEeccCCcccccC
Confidence 555444457889999998654321 1111111111112222221000 00 0113444555432
Q ss_pred -CCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCC-EEEEEe-CCCeEEEEeCCCCccceee
Q psy226 313 -DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK-YLVSCG-DDKTLRVWDTANKRNMKTL 372 (406)
Q Consensus 313 -d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~-~l~sgs-~d~~i~vwd~~~~~~~~~l 372 (406)
++.|.++|+.+++.+.++.. .....+++|+|||+ .++++. .++.|.|+|..+++.++++
T Consensus 296 ~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 296 AAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 35799999999999888753 33578999999999 777776 5899999999999888774
No 212
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.60 E-value=2.9e-14 Score=131.68 Aligned_cols=165 Identities=13% Similarity=0.086 Sum_probs=132.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc---------EEE-EecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGE---------YER-ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~---------~~~-~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
+++.+++++...++++|+.++ +++|++.+.+ +.. ....+.. |+.|+| ++..|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999985 5569865433 221 2223555 999999 89999998 8899999999
Q ss_pred CCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEE
Q psy226 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257 (406)
Q Consensus 178 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~ 257 (406)
.+.........|..++.++.+.+. .+++++.||+|.+||+.++.... +...|++++|+|+| ++.|..||+++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 877666677778888988887754 38889999999999999877653 44679999999999 78899999999
Q ss_pred EEeCCCccc--eeEE------e---cCCceEEEEEeCCC
Q psy226 258 VWSLATKET--KAEL------R---GHDHTVECVAWAPG 285 (406)
Q Consensus 258 vwd~~~~~~--~~~~------~---~~~~~v~~~~~~~~ 285 (406)
+|+...... ...+ . +|...|.++.|.+.
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred EEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 998876654 4444 2 47889999999974
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.60 E-value=4.7e-14 Score=130.30 Aligned_cols=171 Identities=11% Similarity=0.029 Sum_probs=136.0
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe----------EEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy226 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGY----------CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261 (406)
Q Consensus 192 ~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~----------~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~ 261 (406)
.+..+++++...++++|+.++ +.+|++.... .......+.. |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 688899999999999999985 5569875432 1112234566 999999 89999998 8899999999
Q ss_pred CCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEE
Q psy226 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341 (406)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~ 341 (406)
.+.........|...+.++.+.+. .+++++.||.|.+||+.++.... +...|++++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--------------------~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~ 169 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--------------------TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFD 169 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--------------------EEEEEETTSEEEEEETTTCCEEE----EEESEEEEE
T ss_pred hhhhccCccceeecceeeEEecCC--------------------CEEEEECCCCEEEEEccCCcccc----ccCCceEEE
Confidence 887766666777777777765541 28888999999999999887653 345799999
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCcc--ceee------c---cccceEEEEEEeCCCCEEEE
Q psy226 342 FHPGGKYLVSCGDDKTLRVWDTANKRN--MKTL------E---AHSHFVTSLDFHRAHPYVVT 393 (406)
Q Consensus 342 ~s~~g~~l~sgs~d~~i~vwd~~~~~~--~~~l------~---~h~~~v~~l~~~~~~~~l~s 393 (406)
|||+| ++.|..||+|++|+...++. .+++ . +|...|.+|.|.+++.++++
T Consensus 170 WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 170 VTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999 67899999999998877664 4555 2 36788999999999999886
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.59 E-value=4.5e-13 Score=123.29 Aligned_cols=253 Identities=14% Similarity=0.090 Sum_probs=166.9
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEEcCCCcEEEEeccc-------ccCeeeEEECCCCCEEEEEeC--CCc
Q psy226 111 KVIFHPVFSLMASCS----------EDATIRLWDYETGEYERALHGH-------LDSVQDIAFDQSGKLLVSCSA--DMS 171 (406)
Q Consensus 111 ~v~~~p~~~~latgs----------~dg~v~vwd~~~~~~~~~~~~h-------~~~V~~l~~~~~g~~l~sgs~--d~~ 171 (406)
.++++|+++.++.++ .++.|.+||..+++....+.-. ......++|+|||++|+++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999887765 3678999999999988776422 124667999999999988864 689
Q ss_pred EEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC-CeEEEEeecC----CccEE-EEEE-CCCC
Q psy226 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT-GYCVKTLTGH----REWVR-QIKV-SPDG 244 (406)
Q Consensus 172 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~~----~~~v~-~l~~-~~~~ 244 (406)
|.++|+.+++.+.++.... . ...+....+.+++.+.||++.+.++.+ +........+ ...+. ...| .++|
T Consensus 162 VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEETTTTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEEECCCCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 9999999999888875422 1 223333445677888899999999876 5543222111 11221 2345 4677
Q ss_pred CEEEEEeCCCeEEEEeCCCccce--eEEecC----------CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC
Q psy226 245 TLLASCSNDHTARVWSLATKETK--AELRGH----------DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR 312 (406)
Q Consensus 245 ~~l~s~~~d~~v~vwd~~~~~~~--~~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 312 (406)
++++ .+.+|.|.+.|+.+.... ..+.-. ......++++| .+..++....
T Consensus 239 ~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~------------------~~~~lyV~~~ 299 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR------------------ALDRIYLLVD 299 (386)
T ss_dssp EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEET------------------TTTEEEEEEE
T ss_pred cEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECC------------------CCCeEEEEec
Confidence 6554 556899999998765321 111100 00011122222 2334444332
Q ss_pred ----------CCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCC-EEEE-EeCCCeEEEEeCCCCccceeeccccceEE
Q psy226 313 ----------DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK-YLVS-CGDDKTLRVWDTANKRNMKTLEAHSHFVT 380 (406)
Q Consensus 313 ----------d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~-~l~s-gs~d~~i~vwd~~~~~~~~~l~~h~~~v~ 380 (406)
.+.|.+.|+.+++.+..+.- ...+.+|+++|+++ +|++ ...++.|.|+|..+++.++++..-.+ -+
T Consensus 300 ~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~-p~ 377 (386)
T 3sjl_D 300 QRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGH-GP 377 (386)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCS-SC
T ss_pred cccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCC-Cc
Confidence 25799999999999887653 23577999999997 6666 45689999999999999988864322 23
Q ss_pred EEEEeCC
Q psy226 381 SLDFHRA 387 (406)
Q Consensus 381 ~l~~~~~ 387 (406)
.|.+++|
T Consensus 378 ~l~~s~d 384 (386)
T 3sjl_D 378 QVITTAD 384 (386)
T ss_dssp CEEEECC
T ss_pred eeEECCc
Confidence 4455554
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=4.5e-14 Score=129.98 Aligned_cols=260 Identities=14% Similarity=0.105 Sum_probs=172.5
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCCcEEEEEcCCCcEEEEe-------cccccCeeeEEECCCCCEEEEEeC-----CCcE
Q psy226 107 SPVIKVIFHPVFSLMASCS--EDATIRLWDYETGEYERAL-------HGHLDSVQDIAFDQSGKLLVSCSA-----DMSL 172 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs--~dg~v~vwd~~~~~~~~~~-------~~h~~~V~~l~~~~~g~~l~sgs~-----d~~i 172 (406)
..+..|+++|+++++++.. .++.++||.+.+++.. .+ .+|...+.+++++++|++.++-.. +..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5788999999999999864 2343566655556533 22 234567999999999886665443 5789
Q ss_pred EEEeCCCCeEEEEEecC------CcceEEEEEecCCCEE-EEEe---CCCcEEEEEcCCCeEEEEeecCCccEE-EEEEC
Q psy226 173 KLWDMSTYQCLKTMQGH------DHNVTGVAFLPNSDFV-LSAS---RDKTIKMWEVATGYCVKTLTGHREWVR-QIKVS 241 (406)
Q Consensus 173 ~vwd~~~~~~~~~~~~h------~~~v~~~~~~p~~~~l-~s~s---~d~~i~iwd~~~~~~~~~~~~~~~~v~-~l~~~ 241 (406)
.+||+.+++.+..+... ...+..+++.|++..+ ++-+ .++.|.+||..++...+.+.+|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999998877766532 2346889999865554 4444 578999999998887777765432111 13344
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCC-cEEEEE
Q psy226 242 PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK-TIKLWD 320 (406)
Q Consensus 242 ~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-~i~lwd 320 (406)
++|..+.+.+.++.++.|.. .+..++++| ++..|+.+..++ .|..++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s~------------------dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHL--------------GVNGIVLDA------------------ENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp ETTEECBEECTTSCEECCCC--------------CEEEEEECT------------------TSCEEEEEESSCSEEEEEE
T ss_pred ECCEEEEeccCCCceeceec--------------ccceeEecc------------------CCCEEEEEeCCCCeEEEEE
Confidence 56777777778888766642 245688887 356677776665 444444
Q ss_pred CC---CCe-----EE--EEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeec-cccceEEEEEEeCCCC
Q psy226 321 VG---SGS-----LL--FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHP 389 (406)
Q Consensus 321 ~~---~~~-----~~--~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~-~h~~~v~~l~~~~~~~ 389 (406)
.. .+. .. ....++......++++++|.++++...++.|.+||..+++...... .+.....+++|.+++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC
T ss_pred HHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc
Confidence 21 110 00 0112333345679999999999999999999999985554322222 1245689999999998
Q ss_pred EEEEeeCCCe
Q psy226 390 YVVTGSVDKT 399 (406)
Q Consensus 390 ~l~sgs~Dg~ 399 (406)
++++.+..+.
T Consensus 304 l~v~~~~~~~ 313 (343)
T 2qe8_A 304 LYFDCNQLHH 313 (343)
T ss_dssp EEEEECCGGG
T ss_pred EEEEeCcccc
Confidence 8887764433
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.58 E-value=2.2e-13 Score=137.27 Aligned_cols=240 Identities=15% Similarity=0.097 Sum_probs=159.8
Q ss_pred cCCCCeEEEEEcCCCCEEEE-----EeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCc-------
Q psy226 104 GHRSPVIKVIFHPVFSLMAS-----CSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS------- 171 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~lat-----gs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~------- 171 (406)
+|...+..++||||+++||- |+...+|++||+.+++.... ..+.....+++|+ ||+.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 46667889999999998883 33446799999999986543 1111123678999 9999998888744
Q ss_pred ------EEEEeCCCCe----EEEEEec-CCcceEEEEEecCCCEEEEEeC----CCcEEEEEcCCCe-EEEEeecCCccE
Q psy226 172 ------LKLWDMSTYQ----CLKTMQG-HDHNVTGVAFLPNSDFVLSASR----DKTIKMWEVATGY-CVKTLTGHREWV 235 (406)
Q Consensus 172 ------i~vwd~~~~~----~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~----d~~i~iwd~~~~~-~~~~~~~~~~~v 235 (406)
|++|++.+.+ ++..... |...+.++.|+|+|++|+..+. +..|.++|+.++. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 9999997654 2333233 4445788999999998754332 3589999997763 445566665555
Q ss_pred EEEEECCCCCEEEEEe-CC---CeEEEEeCCCccc--eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE
Q psy226 236 RQIKVSPDGTLLASCS-ND---HTARVWSLATKET--KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT 309 (406)
Q Consensus 236 ~~l~~~~~~~~l~s~~-~d---~~v~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 309 (406)
... ++++|..|+..+ .+ +.|..+|+.++.. ...+..|...+. .|+| .+.+|+.
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~------------------~g~~lv~ 342 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHS------------------GSGYLFA 342 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEE------------------ETTEEEE
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEE------------------ECCEEEE
Confidence 444 566666655444 33 5799999987644 244555554443 5554 2445555
Q ss_pred EeC-CC--cEEEEECCCCeEEEEEe-CCCcCEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCc
Q psy226 310 GSR-DK--TIKLWDVGSGSLLFTLI-GHDNWVRGVTFHPGGKYLVSCGDD----KTLRVWDTANKR 367 (406)
Q Consensus 310 ~~~-d~--~i~lwd~~~~~~~~~~~-~h~~~v~~l~~s~~g~~l~sgs~d----~~i~vwd~~~~~ 367 (406)
... ++ .|++||+..+. ...+. .....+..+.++|+++.|+....+ ++|+.||+.+++
T Consensus 343 ~~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 343 EYMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 554 44 68999987544 34443 344567888888888876655444 789999987664
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.55 E-value=2.4e-11 Score=110.84 Aligned_cols=219 Identities=11% Similarity=0.110 Sum_probs=149.2
Q ss_pred eeeEEECCCC-CEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEee
Q psy226 151 VQDIAFDQSG-KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT 229 (406)
Q Consensus 151 V~~l~~~~~g-~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 229 (406)
..+..|++++ .++++...++.|..||..+++.. .+. ....+.+++|.|+++++++. .+ .|.+||..++.......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 4567899975 45666667889999999887643 332 34579999999998877654 44 49999998876543322
Q ss_pred c----CCccEEEEEECCCCCEEEEEeC------CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCC
Q psy226 230 G----HREWVRQIKVSPDGTLLASCSN------DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPP 299 (406)
Q Consensus 230 ~----~~~~v~~l~~~~~~~~l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 299 (406)
. ....++.++++|+|+++++... .+.|..++ +++ ...+..+......++|+|+
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~-~~~~~~~~~~~~~i~~s~d-------------- 189 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGK-VTKLFADISIPNSICFSPD-------------- 189 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTE-EEEEEEEESSEEEEEECTT--------------
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCc-EEEeeCCCcccCCeEEcCC--------------
Confidence 1 1235889999999997776542 24455555 332 2222222234567788773
Q ss_pred CCCCCCEE-EEEeCCCcEEEEECC--CC-e-----EEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccce
Q psy226 300 GQGGGPYL-ATGSRDKTIKLWDVG--SG-S-----LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370 (406)
Q Consensus 300 ~~~~~~~l-~s~~~d~~i~lwd~~--~~-~-----~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~ 370 (406)
+..+ ++.+.++.|.+||+. ++ . ....+......+.+++++++|.+.++...++.|.+||. +++.+.
T Consensus 190 ----g~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 190 ----GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp ----SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred ----CCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 5444 444567899999985 55 2 23333334456788999999998888777789999998 567777
Q ss_pred eeccccceEEEEEEe-CCCCEEEEee
Q psy226 371 TLEAHSHFVTSLDFH-RAHPYVVTGS 395 (406)
Q Consensus 371 ~l~~h~~~v~~l~~~-~~~~~l~sgs 395 (406)
.+..+...+++++|. +++..|..++
T Consensus 265 ~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 265 RYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEECCCCCcEEEEEecCCCCEEEEEe
Confidence 777666679999998 8887664443
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.55 E-value=6e-13 Score=134.11 Aligned_cols=237 Identities=18% Similarity=0.210 Sum_probs=157.2
Q ss_pred ccccCeeeEEECCCCCEEEEE-----eCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCc-------
Q psy226 146 GHLDSVQDIAFDQSGKLLVSC-----SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT------- 213 (406)
Q Consensus 146 ~h~~~V~~l~~~~~g~~l~sg-----s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~------- 213 (406)
+|...+..++|||||++|+-+ +.+.+|++||+.+++.+... .+.....+++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 355578889999999988843 33357999999998865431 111123578899 9999998888744
Q ss_pred ------EEEEEcCCCe----EEEEeec-CCccEEEEEECCCCCEEEEEeC----CCeEEEEeCCCcc-ceeEEecCCceE
Q psy226 214 ------IKMWEVATGY----CVKTLTG-HREWVRQIKVSPDGTLLASCSN----DHTARVWSLATKE-TKAELRGHDHTV 277 (406)
Q Consensus 214 ------i~iwd~~~~~----~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~----d~~v~vwd~~~~~-~~~~~~~~~~~v 277 (406)
|++|++.++. ++..... |..+...+.++|||++|+.... +..++++|+.++. ....+..+....
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 9999998764 2333333 5566788999999998754432 3589999987653 344455444443
Q ss_pred EEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC---CcEEEEECCCCeE--EEEEeCCCcCEEEEEEcCCCCEEEEE
Q psy226 278 ECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD---KTIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSC 352 (406)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~lwd~~~~~~--~~~~~~h~~~v~~l~~s~~g~~l~sg 352 (406)
... +.+. ++.+++....+ +.|..+|+.++.. ...+..|...+. .|++++++|+..
T Consensus 284 ~~~-~~~~-----------------g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 284 VSL-VDNK-----------------GSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp EEE-EEEE-----------------TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred EEE-Eecc-----------------CCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence 333 2221 23344444443 5799999987654 235666666555 889999988766
Q ss_pred eC-CC--eEEEEeCCCCccceeec-cccceEEEEEEeCCCCEEEEeeCC----CeEEEeec
Q psy226 353 GD-DK--TLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVD----KTVKVWEC 405 (406)
Q Consensus 353 s~-d~--~i~vwd~~~~~~~~~l~-~h~~~v~~l~~~~~~~~l~sgs~D----g~v~iw~~ 405 (406)
.. ++ .|++||+..+ ....+. .....+..+.+++++..|+....+ +++..||+
T Consensus 344 ~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 344 YMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp EEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 54 43 7899998754 334443 244567888888888876655444 67888775
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.54 E-value=2.4e-11 Score=110.82 Aligned_cols=220 Identities=14% Similarity=0.043 Sum_probs=148.3
Q ss_pred eEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy226 109 VIKVIFHPV-FSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 109 V~~v~~~p~-~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
..+.+|+|+ +.+++++..++.|..||..+++... +. ....+.+++++++|+++++. .+ .|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEee
Confidence 467889997 4566777788999999998876543 22 34579999999999877754 44 49999998776533222
Q ss_pred c----CCcceEEEEEecCCCEEEEEeC------CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEE-EeCCCeE
Q psy226 188 G----HDHNVTGVAFLPNSDFVLSASR------DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLAS-CSNDHTA 256 (406)
Q Consensus 188 ~----h~~~v~~~~~~p~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~~v 256 (406)
. ....+.+++++|+|+++++... .+.|..++ ++... .+..+......++|+|+|+.++. .+.++.|
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I 203 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRL 203 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEE
Confidence 1 1235889999999997665542 23455555 45433 33333345678999999987654 4567899
Q ss_pred EEEeCC--Cc-cce--eEE---ecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy226 257 RVWSLA--TK-ETK--AEL---RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF 328 (406)
Q Consensus 257 ~vwd~~--~~-~~~--~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~ 328 (406)
.+||+. ++ ... ..+ .........+.+.+ +|.+.++...++.|..||. +++.+.
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~------------------~G~lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA------------------EGHIWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT------------------TSCEEEEEETTTEEEEECT-TCCEEE
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECC------------------CCCEEEEEeCCCEEEEECC-CCCEEE
Confidence 999985 43 211 111 12233445555544 4566666666788999998 677777
Q ss_pred EEeCCCcCEEEEEEc-CCCCEEEEEeC
Q psy226 329 TLIGHDNWVRGVTFH-PGGKYLVSCGD 354 (406)
Q Consensus 329 ~~~~h~~~v~~l~~s-~~g~~l~sgs~ 354 (406)
.+..+...+++++|+ |+++.|+.++.
T Consensus 265 ~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 265 RYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred EEECCCCCcEEEEEecCCCCEEEEEec
Confidence 777777789999998 88887755443
No 220
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.53 E-value=1.1e-11 Score=112.00 Aligned_cols=229 Identities=13% Similarity=0.074 Sum_probs=151.9
Q ss_pred eccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCC
Q psy226 102 LSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180 (406)
Q Consensus 102 l~~h~~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~ 180 (406)
+..........+|+|+++ +++++..++.|..|+. +++. ..+..+...+.+++++++|+++++...++.|.+|+.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 334445567889999998 7778888999999998 4553 3444566778999999999977666666889999986 5
Q ss_pred eEEEEEecC-----CcceEEEEEecCCCEEEE----EeC-------------CCcEEEEEcCCCeEEEEeecCCccEEEE
Q psy226 181 QCLKTMQGH-----DHNVTGVAFLPNSDFVLS----ASR-------------DKTIKMWEVATGYCVKTLTGHREWVRQI 238 (406)
Q Consensus 181 ~~~~~~~~h-----~~~v~~~~~~p~~~~l~s----~s~-------------d~~i~iwd~~~~~~~~~~~~~~~~v~~l 238 (406)
+.. .+..+ ...+..+++.|+|++.++ |.. .+.|..+|..++...... .....+.+
T Consensus 117 ~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl 193 (305)
T 3dr2_A 117 QAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGL 193 (305)
T ss_dssp CEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEE
T ss_pred CEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcce
Confidence 432 22211 124667999999998886 332 245777777666544332 33456789
Q ss_pred EECCCCCEEEEEeCC------CeEEEEeCCCccceeE---Ee-cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEE
Q psy226 239 KVSPDGTLLASCSND------HTARVWSLATKETKAE---LR-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA 308 (406)
Q Consensus 239 ~~~~~~~~l~s~~~d------~~v~vwd~~~~~~~~~---~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 308 (406)
+|+|+++.|+.+... +.|.+|++.... +.. +. ........+.+. ..|. +.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d------------------~~G~-lw 253 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVD------------------RGGW-LW 253 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEEC------------------TTSC-EE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEEC------------------CCCC-EE
Confidence 999999987777665 789999986543 111 00 000111112222 2455 44
Q ss_pred EEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEE
Q psy226 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359 (406)
Q Consensus 309 s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~ 359 (406)
+++.+ .|.+||. .++.+..+..+. .+.+++|+|+++.|+.++.++..+
T Consensus 254 v~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 254 SSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp ECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEE
T ss_pred EecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 44444 4999998 577776666554 588999999999888888765433
No 221
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.51 E-value=4.2e-16 Score=144.99 Aligned_cols=225 Identities=16% Similarity=0.090 Sum_probs=128.2
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcc-eE-
Q psy226 117 VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN-VT- 194 (406)
Q Consensus 117 ~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~-v~- 194 (406)
++..+++++.||.|+.||..+|+....+.. +.+.+..+..++..+++++.|+.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 467899999999999999999998877765 56666666677878888889999999999888776555433211 10
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCC
Q psy226 195 GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274 (406)
Q Consensus 195 ~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~ 274 (406)
+..+ ..+..+++|+.|+.|..||..+|+.+..+..+. ...++|++..+++++.|+.|+.||..+++.+-.+..+.
T Consensus 86 sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 86 SPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred CceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 0011 134578888999999999999999887776553 23456788899999999999999999887654443211
Q ss_pred ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEE----E
Q psy226 275 HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYL----V 350 (406)
Q Consensus 275 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l----~ 350 (406)
+.+.. +. .... ....+++++.|+.|+.||..+|+.+..+.-....+....++++|... +
T Consensus 161 -------~~~~~----~~-----~~~~-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~~v~~~~ 223 (369)
T 2hz6_A 161 -------YAASL----PE-----DDVD-YKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLRKVMHIN 223 (369)
T ss_dssp -------ECCBC----CC-----CCTT-CCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCEEECCEE
T ss_pred -------ccCcc----cc-----CCcc-ccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceEecccee
Confidence 11100 00 0000 11357778999999999999999888776433333444556666432 1
Q ss_pred EEeCCCeEEEEeCCCCc
Q psy226 351 SCGDDKTLRVWDTANKR 367 (406)
Q Consensus 351 sgs~d~~i~vwd~~~~~ 367 (406)
.+ ++.++.+|..+++
T Consensus 224 ~~--~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 224 VA--VETLRYLTFMSGE 238 (369)
T ss_dssp EE--HHHHHHHHHHHHH
T ss_pred ec--ccceeeeehhcCC
Confidence 22 3456666665555
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=1.6e-11 Score=110.90 Aligned_cols=232 Identities=13% Similarity=0.090 Sum_probs=155.3
Q ss_pred ecccccCeeeEEECCCCC-EEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC
Q psy226 144 LHGHLDSVQDIAFDQSGK-LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222 (406)
Q Consensus 144 ~~~h~~~V~~l~~~~~g~-~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~ 222 (406)
+..+.....+..|+++|+ +++++..++.|..|+. +++ ...+..+...+.+++++|+|+++++...++.|.+||.. +
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 333445567899999998 6667777899999998 444 34555566778999999999976665566889999975 5
Q ss_pred eEEEEeecC----CccEEEEEECCCCCEEEE----EeC-------------CCeEEEEeCCCccceeEEecCCceEEEEE
Q psy226 223 YCVKTLTGH----REWVRQIKVSPDGTLLAS----CSN-------------DHTARVWSLATKETKAELRGHDHTVECVA 281 (406)
Q Consensus 223 ~~~~~~~~~----~~~v~~l~~~~~~~~l~s----~~~-------------d~~v~vwd~~~~~~~~~~~~~~~~v~~~~ 281 (406)
......... ...++.++++|+|+++++ |.. .+.|..+|..+++..... .......++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~ 194 (305)
T 3dr2_A 117 QAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLA 194 (305)
T ss_dssp CEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEE
T ss_pred CEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceE
Confidence 432222111 124667999999998886 332 256777777655543322 233456778
Q ss_pred eCCCCCccccccccCCCCCCCCCCEEEEEeCC------CcEEEEECCCCeEE--EEE-eCCCcCEEEEEEcCCCCEEEEE
Q psy226 282 WAPGVASESISEAAGRPPGQGGGPYLATGSRD------KTIKLWDVGSGSLL--FTL-IGHDNWVRGVTFHPGGKYLVSC 352 (406)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d------~~i~lwd~~~~~~~--~~~-~~h~~~v~~l~~s~~g~~l~sg 352 (406)
|+|+ +..|+.+... +.|.+||+..+... ..+ .........++++++|++.++.
T Consensus 195 ~spd------------------g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 195 FSPD------------------EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp ECTT------------------SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC
T ss_pred EcCC------------------CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec
Confidence 8873 5556666554 68999998755411 111 1123345678999999955544
Q ss_pred eCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEE
Q psy226 353 GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402 (406)
Q Consensus 353 s~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~i 402 (406)
.+ .|.+||. .++.+..+.... .+.+++|.++++.|..++.++..++
T Consensus 257 -~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 257 -GT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp -SS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred -CC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 44 4999997 566666666554 4889999999988887777655444
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.46 E-value=1.7e-11 Score=114.79 Aligned_cols=239 Identities=12% Similarity=0.064 Sum_probs=164.1
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEEcCCCcEEEEeccc-------ccCeeeEEECCCCCEEEEEeC--CCc
Q psy226 111 KVIFHPVFSLMASCS----------EDATIRLWDYETGEYERALHGH-------LDSVQDIAFDQSGKLLVSCSA--DMS 171 (406)
Q Consensus 111 ~v~~~p~~~~latgs----------~dg~v~vwd~~~~~~~~~~~~h-------~~~V~~l~~~~~g~~l~sgs~--d~~ 171 (406)
.++++|+++.|+.+. .++.|.++|..+++....+.-. ......+.|+|||++|+++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999888776 4789999999999988776421 234567999999999998874 578
Q ss_pred EEEEeCCCCeEEEEEecCCcceEEEEEecCC-CEEEEEeCCCcEEEEEcCCCeEEEE----eecCCccE-EEEEECCCCC
Q psy226 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS-DFVLSASRDKTIKMWEVATGYCVKT----LTGHREWV-RQIKVSPDGT 245 (406)
Q Consensus 172 i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~iwd~~~~~~~~~----~~~~~~~v-~~l~~~~~~~ 245 (406)
|.+.|+.+++.+.++..-.. ....|++ ..+++.+.||.+.+.+..++..... +.....++ ..+.+.+++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 99999999998887764221 2334443 4566677788888778755544322 11111111 2356789988
Q ss_pred EEEEEeCCCeEEEEeCCCcccee--EEec---CC-------ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC-
Q psy226 246 LLASCSNDHTARVWSLATKETKA--ELRG---HD-------HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR- 312 (406)
Q Consensus 246 ~l~s~~~d~~v~vwd~~~~~~~~--~~~~---~~-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~- 312 (406)
.++..+..+.+.+.|+....... .+.. .. .....++++| ++..+++...
T Consensus 278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~------------------dg~rlyVa~~~ 339 (426)
T 3c75_H 278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHR------------------QSDRIYLLVDQ 339 (426)
T ss_dssp EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEG------------------GGTEEEEEEEE
T ss_pred EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcC------------------CCCEEEEEecc
Confidence 88777888999999986543210 0000 00 0000123333 2334444321
Q ss_pred ---------CCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCC-EEEEEe-CCCeEEEEeCCCCccceee
Q psy226 313 ---------DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK-YLVSCG-DDKTLRVWDTANKRNMKTL 372 (406)
Q Consensus 313 ---------d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~-~l~sgs-~d~~i~vwd~~~~~~~~~l 372 (406)
++.|.++|+.+.+.+.++... ....++.|+|+|+ ++++.. .++.|.|+|..+++.++++
T Consensus 340 ~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 340 RDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 357999999999998887532 2477899999999 888877 5999999999999988886
No 224
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.45 E-value=3e-11 Score=121.20 Aligned_cols=273 Identities=13% Similarity=0.063 Sum_probs=167.8
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeccc--ccCeeeEEECC---CCCEEEEEe------CCCcEEEEeCCCCeEEEEE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGH--LDSVQDIAFDQ---SGKLLVSCS------ADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h--~~~V~~l~~~~---~g~~l~sgs------~d~~i~vwd~~~~~~~~~~ 186 (406)
+..|+.++.|+.|..+|..+|+........ ......+..+| ++. ++.++ .++.|..||..+++.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 467888999999999999999987665432 11111111122 444 44443 3689999999999988766
Q ss_pred ecC--C-----------------------------cceEEEEEecCCCEEEEEeCCCc-------------------EEE
Q psy226 187 QGH--D-----------------------------HNVTGVAFLPNSDFVLSASRDKT-------------------IKM 216 (406)
Q Consensus 187 ~~h--~-----------------------------~~v~~~~~~p~~~~l~s~s~d~~-------------------i~i 216 (406)
... . .....+++.|++++++.++.++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 421 0 01125788998899999888764 999
Q ss_pred EEcCCCeEEEEeec--CCc-------cEEEEEECCCCC---EEEEEeCCCeEEEEeCCCccceeEEecCC-ceEEEEE--
Q psy226 217 WEVATGYCVKTLTG--HRE-------WVRQIKVSPDGT---LLASCSNDHTARVWSLATKETKAELRGHD-HTVECVA-- 281 (406)
Q Consensus 217 wd~~~~~~~~~~~~--~~~-------~v~~l~~~~~~~---~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~~v~~~~-- 281 (406)
+|..+|+.+..++. |.. .........+|+ .++.++.+|.++++|..+++.+....... .....+.
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~ 359 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMK 359 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETT
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCcc
Confidence 99999998887764 321 111222223564 78899999999999999988764332111 0000000
Q ss_pred ---------------------eCCCCCccccccccCCCCCCCCCCEEEEEe-----------------------------
Q psy226 282 ---------------------WAPGVASESISEAAGRPPGQGGGPYLATGS----------------------------- 311 (406)
Q Consensus 282 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------------------------- 311 (406)
..|...... .......++...++++..
T Consensus 360 ~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~---~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 360 TGRPILDEENAAYWKNGKRNLVTPAFWGAH---DWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp TTEEEECHHHHCTTTSSSCEEESSCTTCSS---CSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CCCcccchhhccccCCCCeeEeCCCccccc---CCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 000000000 000000001112222221
Q ss_pred ----------------CCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc
Q psy226 312 ----------------RDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375 (406)
Q Consensus 312 ----------------~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h 375 (406)
.+|.|+.||+.+|+.+..+..+.... .-.+...+..|+.|+.||.++.||..+++.+-++...
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~-~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN-GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC-CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc-CccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 14789999999999988876654332 2355567889999999999999999999998777654
Q ss_pred cce-EEEEEEeCCCC-EEEEee
Q psy226 376 SHF-VTSLDFHRAHP-YVVTGS 395 (406)
Q Consensus 376 ~~~-v~~l~~~~~~~-~l~sgs 395 (406)
... -.-+.|..+|+ |+++.+
T Consensus 516 ~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 516 SGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp SCCCSCCEEEEETTEEEEEEEE
T ss_pred CCcccCceEEEECCEEEEEEEe
Confidence 322 23466777776 555443
No 225
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.44 E-value=8.3e-12 Score=114.93 Aligned_cols=245 Identities=10% Similarity=-0.029 Sum_probs=162.1
Q ss_pred cEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe----------CCCcEEEEeCCCCeEEEEEecCC-------c
Q psy226 129 TIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS----------ADMSLKLWDMSTYQCLKTMQGHD-------H 191 (406)
Q Consensus 129 ~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs----------~d~~i~vwd~~~~~~~~~~~~h~-------~ 191 (406)
+|.+.|..+++.+.++.....+ .+.++|+|++++++. .+++|.+||..+++.+.++.... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999888755555 799999999998886 36899999999999998886431 2
Q ss_pred ceEEEEEecCCCEEEEEeC--CCcEEE--EEcCCCeEEEEeecCCccEEEEEECCCC-CEEEEEeCCCeEEEEeCCC---
Q psy226 192 NVTGVAFLPNSDFVLSASR--DKTIKM--WEVATGYCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLAT--- 263 (406)
Q Consensus 192 ~v~~~~~~p~~~~l~s~s~--d~~i~i--wd~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~v~vwd~~~--- 263 (406)
....+.|+|+|++++++.. +..+.+ +|..+ +..+..... ..+.|+| ..+++.+.|+.+.+.|+.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 3457899999999988864 467888 99877 344421111 1123444 3455666788888888865
Q ss_pred --ccceeE----EecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCe--EEEEEeC---
Q psy226 264 --KETKAE----LRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS--LLFTLIG--- 332 (406)
Q Consensus 264 --~~~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~--~~~~~~~--- 332 (406)
++.... +.....+. . .+ .+..++..+. +.|.+.|+.++. .+..+.-
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~---~-~~------------------~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~ 254 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAA---Q-AN------------------YPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNES 254 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCE---E-ET------------------TTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCT
T ss_pred cCCeEEEEeeeeeeCCCCcc---c-cc------------------cCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccc
Confidence 221100 00000111 1 11 2233444444 889999986532 2222110
Q ss_pred ----CC---cCEEEEEEcCCCCEEEEEeC---------CCeEEEEeCCCCccceeeccccceEEEEEEeCCCC-EEEEee
Q psy226 333 ----HD---NWVRGVTFHPGGKYLVSCGD---------DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP-YVVTGS 395 (406)
Q Consensus 333 ----h~---~~v~~l~~s~~g~~l~sgs~---------d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~-~l~sgs 395 (406)
+. .....++|+|+|+.++.+.. ++.+.++|..+.+.+.++.... ....++|+|+++ ++++..
T Consensus 255 ~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 255 GRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEE
T ss_pred cccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEcc
Confidence 00 11122689999988876532 2356699999999988887544 578999999997 566666
Q ss_pred -CCCeEEEeecC
Q psy226 396 -VDKTVKVWECR 406 (406)
Q Consensus 396 -~Dg~v~iw~~~ 406 (406)
.++.|.++|..
T Consensus 334 ~~~~~VsVID~~ 345 (368)
T 1mda_H 334 AGTEVLDIYDAA 345 (368)
T ss_dssp TTTTEEEEEESS
T ss_pred CCCCeEEEEECC
Confidence 59999999963
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.44 E-value=2.9e-11 Score=121.28 Aligned_cols=277 Identities=14% Similarity=0.108 Sum_probs=179.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEecccccC----------e-eeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGHLDS----------V-QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~----------V-~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
+..|+.++.++.|.-+|..+|+.+-.+..+... + ..+++ .+..++.++.|+.+..+|..+++.+...
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 567778888999999999999988776543221 1 11222 3568888999999999999999988766
Q ss_pred ecC--CcceEEEEEec--CCCEEEEEe------CCCcEEEEEcCCCeEEEEeecCC------------------------
Q psy226 187 QGH--DHNVTGVAFLP--NSDFVLSAS------RDKTIKMWEVATGYCVKTLTGHR------------------------ 232 (406)
Q Consensus 187 ~~h--~~~v~~~~~~p--~~~~l~s~s------~d~~i~iwd~~~~~~~~~~~~~~------------------------ 232 (406)
... ......+...| .+..++.++ .++.|..||..+|+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 542 11111111111 134455543 37899999999999887764210
Q ss_pred -------ccEEEEEECCCCCEEEEEeCCCe-------------------EEEEeCCCccceeEEecCCceEEEEEeCCCC
Q psy226 233 -------EWVRQIKVSPDGTLLASCSNDHT-------------------ARVWSLATKETKAELRGHDHTVECVAWAPGV 286 (406)
Q Consensus 233 -------~~v~~l~~~~~~~~l~s~~~d~~-------------------v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 286 (406)
.....++++|++.+++.++.++. |..+|..+++.+-.+....+.. |..+.
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~----wd~~~ 303 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDA----WDYTA 303 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCC----SCCCC
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccc----ccccC
Confidence 00125788898899999888764 9999999988776554321110 00000
Q ss_pred CccccccccCCCCCCCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCC-CcCE-------------------------
Q psy226 287 ASESISEAAGRPPGQGGG---PYLATGSRDKTIKLWDVGSGSLLFTLIGH-DNWV------------------------- 337 (406)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~---~~l~s~~~d~~i~lwd~~~~~~~~~~~~h-~~~v------------------------- 337 (406)
....+... ...+| ..++.++.+|.++++|..+|+.+....-. ..+.
T Consensus 304 ~~~~~l~d-----~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~ 378 (689)
T 1yiq_A 304 TQHMILAE-----LPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKR 378 (689)
T ss_dssp CSCEEEEE-----EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSC
T ss_pred CCCcEEEe-----eccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCe
Confidence 00000000 00012 36888999999999999999987543211 1111
Q ss_pred -------------EEEEEcCCCCEEEEEeC---------------------------------------------CCeEE
Q psy226 338 -------------RGVTFHPGGKYLVSCGD---------------------------------------------DKTLR 359 (406)
Q Consensus 338 -------------~~l~~s~~g~~l~sgs~---------------------------------------------d~~i~ 359 (406)
..++|+|+...+++... +|.|+
T Consensus 379 ~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~ 458 (689)
T 1yiq_A 379 NLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLI 458 (689)
T ss_dssp EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEE
T ss_pred eEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEE
Confidence 12688998888776532 37899
Q ss_pred EEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 360 vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
.||..+++.+-++..+. .+..-.+...+.+++.|+.||.++.||.+
T Consensus 459 A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 459 AWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp EEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECC
Confidence 99999998776665443 23333566678899999999999999964
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.43 E-value=4.9e-11 Score=119.36 Aligned_cols=275 Identities=12% Similarity=0.094 Sum_probs=182.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEecccccC-----------eeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGHLDS-----------VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~-----------V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
+..|+.++.++.|.-+|..+|+.+-.+...... ...+++ .+..|+.++.|+.+..+|..+++.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 567777788999999999999988766533210 122333 4568888999999999999999988877
Q ss_pred ecC-C----cceEEEEEecCCCEEEEEeC------CCcEEEEEcCCCeEEEEeecCCcc---------------------
Q psy226 187 QGH-D----HNVTGVAFLPNSDFVLSASR------DKTIKMWEVATGYCVKTLTGHREW--------------------- 234 (406)
Q Consensus 187 ~~h-~----~~v~~~~~~p~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~~~~--------------------- 234 (406)
..+ . ..+.+.-.. .+..++.++. ++.|+.+|..+|+.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g 233 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred cCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccC
Confidence 654 2 122211111 2455665553 789999999999988776532211
Q ss_pred -----------EEEEEECCCCCEEEEEeCCC-------------------eEEEEeCCCccceeEEecCCceEEEEEeCC
Q psy226 235 -----------VRQIKVSPDGTLLASCSNDH-------------------TARVWSLATKETKAELRGHDHTVECVAWAP 284 (406)
Q Consensus 235 -----------v~~l~~~~~~~~l~s~~~d~-------------------~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 284 (406)
...++++|++.+++.++.++ .|..+|..+++.+-.+....+.. |.-
T Consensus 234 ~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~----wd~ 309 (677)
T 1kb0_A 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDN----WDY 309 (677)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC----SCC
T ss_pred ceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcc----ccc
Confidence 13578889988888887664 58899998887765544311100 000
Q ss_pred CC-CccccccccCCCCCCCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCE----------------------
Q psy226 285 GV-ASESISEAAGRPPGQGGG---PYLATGSRDKTIKLWDVGSGSLLFTLIGHD-NWV---------------------- 337 (406)
Q Consensus 285 ~~-~~~~~~~~~~~~~~~~~~---~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~-~~v---------------------- 337 (406)
+. ....+... ..+| ..++.++.+|.+.++|..+|+.+..+.-.. .+.
T Consensus 310 ~~~~~p~l~~~------~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~ 383 (677)
T 1kb0_A 310 TSTQPMILADI------KIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQ 383 (677)
T ss_dssp CCCSCCEEEEE------EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCE
T ss_pred ccCCCcEEEec------ccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCcc
Confidence 00 00000000 0023 578899999999999999999887654211 111
Q ss_pred ------------EEEEEcCCCCEEEEEeC-------------------------------------------CCeEEEEe
Q psy226 338 ------------RGVTFHPGGKYLVSCGD-------------------------------------------DKTLRVWD 362 (406)
Q Consensus 338 ------------~~l~~s~~g~~l~sgs~-------------------------------------------d~~i~vwd 362 (406)
..++|+|++..+++... .|.|..||
T Consensus 384 ~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D 463 (677)
T 1kb0_A 384 DAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWD 463 (677)
T ss_dssp ECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEE
T ss_pred EECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEe
Confidence 14688998888877543 27899999
Q ss_pred CCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 363 TANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 363 ~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
..+++.+-++.. ...+....+...+.+++.|+.||.+++||.+
T Consensus 464 ~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 464 PVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp TTTTEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCCcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 999987665542 2334445566778889999999999999963
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.42 E-value=3.1e-10 Score=105.47 Aligned_cols=258 Identities=9% Similarity=0.012 Sum_probs=168.7
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcce---
Q psy226 117 VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNV--- 193 (406)
Q Consensus 117 ~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v--- 193 (406)
++..++.++.++.|..+|..+|+.................. +..++.++.++.+..+|..+++.+..........
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 35677888899999999999998876655432222222222 4578888899999999999998877665432211
Q ss_pred --EEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCcc-------EEEEEECC--CCCEEEEEeCCCeEEEEeCC
Q psy226 194 --TGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW-------VRQIKVSP--DGTLLASCSNDHTARVWSLA 262 (406)
Q Consensus 194 --~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~-------v~~l~~~~--~~~~l~s~~~d~~v~vwd~~ 262 (406)
..... .+..++.++.++.+..+|..+|..+......... +..+...| .+..++.++.++.+..+|..
T Consensus 180 ~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~ 257 (376)
T 3q7m_A 180 GESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLR 257 (376)
T ss_dssp CCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETT
T ss_pred CCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECC
Confidence 11222 2457888888999999999999887665432110 00011111 24677788889999999998
Q ss_pred CccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCEEEEE
Q psy226 263 TKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVT 341 (406)
Q Consensus 263 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-h~~~v~~l~ 341 (406)
+++.+-..... ....... .+..++.++.++.|..+|..+|+.+..... ....+....
T Consensus 258 tG~~~w~~~~~--~~~~~~~--------------------~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~ 315 (376)
T 3q7m_A 258 SGQIMWKRELG--SVNDFIV--------------------DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPV 315 (376)
T ss_dssp TCCEEEEECCC--CEEEEEE--------------------ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCE
T ss_pred CCcEEeeccCC--CCCCceE--------------------ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCE
Confidence 88765443311 1122211 234677888899999999999998877652 222222223
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEE-EEEEeCCCCEEEEeeCCCeEEEee
Q psy226 342 FHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVT-SLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 342 ~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~-~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
. .+..|+.++.+|.|+++|..+++.+.........+. .... .+..|..++.||.|..|+
T Consensus 316 ~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 316 L--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp E--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred E--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 2 256788899999999999999987766554222222 1222 245677889999999987
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.40 E-value=7.1e-11 Score=118.20 Aligned_cols=270 Identities=9% Similarity=-0.017 Sum_probs=170.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeccc-c----cCeee-EEECCCCCEEEEEeC------CCcEEEEeCCCCeEEEE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGH-L----DSVQD-IAFDQSGKLLVSCSA------DMSLKLWDMSTYQCLKT 185 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h-~----~~V~~-l~~~~~g~~l~sgs~------d~~i~vwd~~~~~~~~~ 185 (406)
+..|+.++.|+.|..+|..+|+....+..+ . ..+.+ ... .+..++.++. ++.|..+|..+++.+..
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 567888899999999999999988776644 1 12221 111 1345555543 68999999999998877
Q ss_pred EecCCcc--------------------------------eEEEEEecCCCEEEEEeCCC-------------------cE
Q psy226 186 MQGHDHN--------------------------------VTGVAFLPNSDFVLSASRDK-------------------TI 214 (406)
Q Consensus 186 ~~~h~~~--------------------------------v~~~~~~p~~~~l~s~s~d~-------------------~i 214 (406)
+...... ...+++.|+++.++.++.++ +|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 6542211 12578899999888887664 59
Q ss_pred EEEEcCCCeEEEEeec--CCc-------cEEEEEECCCC---CEEEEEeCCCeEEEEeCCCccceeEEecCCce-EEEE-
Q psy226 215 KMWEVATGYCVKTLTG--HRE-------WVRQIKVSPDG---TLLASCSNDHTARVWSLATKETKAELRGHDHT-VECV- 280 (406)
Q Consensus 215 ~iwd~~~~~~~~~~~~--~~~-------~v~~l~~~~~~---~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~-v~~~- 280 (406)
..+|..+|+.+..++. |.. ....+....+| ..++.++.+|.++++|..+++.+........+ ...+
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 9999999998877653 321 12222333467 67899999999999999998876654422110 1000
Q ss_pred ------------------EeCCCCCccccccccCCCCCCCCCCEEEEEeC------------------------------
Q psy226 281 ------------------AWAPGVASESISEAAGRPPGQGGGPYLATGSR------------------------------ 312 (406)
Q Consensus 281 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~------------------------------ 312 (406)
...|...... .......++...++++...
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~---~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 442 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAH---NWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNT 442 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSS---CSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCC
T ss_pred CCCceeeccccCcCCCccEECcCccccc---CCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccc
Confidence 0011000000 0000000112233333322
Q ss_pred -------------CCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecccc-ce
Q psy226 313 -------------DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS-HF 378 (406)
Q Consensus 313 -------------d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~-~~ 378 (406)
.+.|..||+.+++.+..+... ..+.+..+...+..++.++.||.+++||..+++.+.++.... ..
T Consensus 443 g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~ 521 (677)
T 1kb0_A 443 AKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVV 521 (677)
T ss_dssp CEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC
T ss_pred ccccccccCCCCCccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcc
Confidence 278999999999988776533 233444566678889999999999999999999988886433 22
Q ss_pred EEEEEEeCCCC-EEEE
Q psy226 379 VTSLDFHRAHP-YVVT 393 (406)
Q Consensus 379 v~~l~~~~~~~-~l~s 393 (406)
-.-+.|.++|+ ++++
T Consensus 522 ~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 522 AAPSTYMVDGRQYVSV 537 (677)
T ss_dssp SCCEEEEETTEEEEEE
T ss_pred cCCEEEEeCCEEEEEE
Confidence 23455667776 4444
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.40 E-value=1.4e-09 Score=100.98 Aligned_cols=263 Identities=9% Similarity=0.039 Sum_probs=168.9
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeccc---------ccCeee-EEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGH---------LDSVQD-IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h---------~~~V~~-l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
+..++.++.++.|..+|..+|+........ ...+.+ +.. ++..++.++.++.|..+|..+++.+....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 567888888999999999999877655432 122222 222 45678888999999999999998876665
Q ss_pred cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccE-----EEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy226 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV-----RQIKVSPDGTLLASCSNDHTARVWSLA 262 (406)
Q Consensus 188 ~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v-----~~l~~~~~~~~l~s~~~d~~v~vwd~~ 262 (406)
........... .+..++.++.++.|..+|..+|+.+.......... ...... +..++.++.++.+..+|..
T Consensus 131 ~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 131 VAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp CSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred CCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 44322222222 24578888999999999999998877765432211 111121 4467778889999999998
Q ss_pred CccceeEEecCCce----EEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEE
Q psy226 263 TKETKAELRGHDHT----VECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR 338 (406)
Q Consensus 263 ~~~~~~~~~~~~~~----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~ 338 (406)
+++.+-........ +..+. .....+. ..+..++.++.++.+..+|..+|+.+..... ....
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~-----------~~~~~p~--~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~ 271 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLS-----------DVDTTPV--VVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVN 271 (376)
T ss_dssp TCCEEEEEECCC----------------------CCCCCCE--EETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEE
T ss_pred CCcEEEEEecccCCCCccccccc-----------ccCCCcE--EECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCC
Confidence 88765444321110 00000 0000000 0234677788899999999999998876543 2234
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc-ccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 339 GVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA-HSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 339 ~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~-h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.+.. ++..|+.++.++.|..+|..+++.+-.... ....+..... .+..|..++.+|.+..+|.
T Consensus 272 ~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 272 DFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp EEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEET
T ss_pred CceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEEC
Confidence 4443 366788888899999999999886644431 1122222222 2457888888999998885
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=4e-11 Score=110.18 Aligned_cols=227 Identities=12% Similarity=0.074 Sum_probs=150.0
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEEcCCCcEEEEeccc------ccCeeeEEECCCCCEE-EEEe---C
Q psy226 104 GHRSPVIKVIFHPVFSLMASCSE-----DATIRLWDYETGEYERALHGH------LDSVQDIAFDQSGKLL-VSCS---A 168 (406)
Q Consensus 104 ~h~~~V~~v~~~p~~~~latgs~-----dg~v~vwd~~~~~~~~~~~~h------~~~V~~l~~~~~g~~l-~sgs---~ 168 (406)
+|...+..++++|+++++++-.. ++.|.+||..+++....+... ...+.++++++++..+ ++.+ .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 46678999999999987776544 689999999999877665432 2356899999865444 5554 5
Q ss_pred CCcEEEEeCCCCeEEEEEecCCcceE-EEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE
Q psy226 169 DMSLKLWDMSTYQCLKTMQGHDHNVT-GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247 (406)
Q Consensus 169 d~~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 247 (406)
++.|.+||+.+++..+.+.+|..... ...+.+++..+.+.+.+++++.|.. .+..++++|+|+.|
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~--------------~~~gia~s~dg~~l 209 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHL--------------GVNGIVLDAENEWL 209 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCC--------------CEEEEEECTTSCEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceec--------------ccceeEeccCCCEE
Confidence 78999999998887766655432111 1345567777777788888766631 25679999999988
Q ss_pred EEEeCCC-eEEEEeCCC---ccc-----ee--EEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcE
Q psy226 248 ASCSNDH-TARVWSLAT---KET-----KA--ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTI 316 (406)
Q Consensus 248 ~s~~~d~-~v~vwd~~~---~~~-----~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 316 (406)
+.+..++ .+..++... ... .. ...++......+++.+ +|.++++...++.|
T Consensus 210 y~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~------------------~G~l~va~~~~~~V 271 (343)
T 2qe8_A 210 YLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK------------------DHNIYVGDLAHSAI 271 (343)
T ss_dssp EEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT------------------TCCEEEEEGGGTEE
T ss_pred EEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC------------------CCCEEEEccCCCeE
Confidence 8887665 444444311 000 00 0111111222344433 46788888888999
Q ss_pred EEEECCCCeEEEEEeC-CCcCEEEEEEcCCCCEEEEEeCCCeEEEEe
Q psy226 317 KLWDVGSGSLLFTLIG-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362 (406)
Q Consensus 317 ~lwd~~~~~~~~~~~~-h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd 362 (406)
.+||..+++....... +...+.+++|+++|+++++.+..+.+-+|.
T Consensus 272 ~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 272 GVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp EEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred EEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccccccc
Confidence 9999866664333322 245789999999998888877665554443
No 232
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.37 E-value=2e-13 Score=126.86 Aligned_cols=204 Identities=16% Similarity=0.058 Sum_probs=119.5
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCc-cEE-
Q psy226 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE-WVR- 236 (406)
Q Consensus 159 ~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~-~v~- 236 (406)
++..+++++.|+.|..||..+++.+..+.. ..+.+..+.+++..+++++.|+.|+.||..+|+.+.....+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 567899999999999999999999888776 4555555666777788888999999999999887666543321 110
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcE
Q psy226 237 QIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTI 316 (406)
Q Consensus 237 ~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 316 (406)
...+. ++..+++|+.|+.++.||..+++.+..+..+.. ..++| .+..+++++.|+.|
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p------------------~~~~v~~~~~dg~v 142 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSP------------------STSLLYLGRTEYTI 142 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC--------------------------------------------EEEEEEEEEE
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccc------------------cCCEEEEEecCCEE
Confidence 00111 345677888899999999998877655543321 11222 34578888999999
Q ss_pred EEEECCCCeEEEEEeCCCcCEEEEEEcCCC---CEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCC
Q psy226 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGG---KYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP 389 (406)
Q Consensus 317 ~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g---~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~ 389 (406)
+.||.++|+.+..+..+. ....+++++. ..+++++.||.|+.||..+++.+-+.......+....+++++.
T Consensus 143 ~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 143 TMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGL 216 (369)
T ss_dssp ECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSC
T ss_pred EEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCce
Confidence 999999998765543211 1223333332 5677789999999999999987666554333334444555553
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.35 E-value=4.5e-11 Score=110.08 Aligned_cols=244 Identities=12% Similarity=0.005 Sum_probs=158.1
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEEcCCCcEEEEeccc-------ccCeeeEEECCCCCEEEEEeC--CCc
Q psy226 111 KVIFHPVFSLMASCS----------EDATIRLWDYETGEYERALHGH-------LDSVQDIAFDQSGKLLVSCSA--DMS 171 (406)
Q Consensus 111 ~v~~~p~~~~latgs----------~dg~v~vwd~~~~~~~~~~~~h-------~~~V~~l~~~~~g~~l~sgs~--d~~ 171 (406)
.++|+|+++.++.+. .+++|.+||..+++....+..+ ......++++|||++|+++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999888886 3789999999999998887643 134678999999999998874 457
Q ss_pred EEE--EeCCCCeEEEEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcCC-----CeEEEE----eecCCccEEEEE
Q psy226 172 LKL--WDMSTYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVAT-----GYCVKT----LTGHREWVRQIK 239 (406)
Q Consensus 172 i~v--wd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~~-----~~~~~~----~~~~~~~v~~l~ 239 (406)
+.+ +|..+ +..+..- .. ..+.|+++ .+++.+.|+.+.+.|+.+ ++.... +.-...+. .
T Consensus 149 v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~ 218 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q 218 (368)
T ss_dssp EEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E
T ss_pred EEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c
Confidence 888 99876 3444321 11 12345443 455667788888888876 332211 11112222 3
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCccc--eeEEec-------CCc---eEEEEEeCCCCCccccccccCCCCCCCCCCEE
Q psy226 240 VSPDGTLLASCSNDHTARVWSLATKET--KAELRG-------HDH---TVECVAWAPGVASESISEAAGRPPGQGGGPYL 307 (406)
Q Consensus 240 ~~~~~~~l~s~~~d~~v~vwd~~~~~~--~~~~~~-------~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 307 (406)
.+++..++..+. +.+.+.|+.+... ...+.. +.. ....+.+.| ++..+
T Consensus 219 -~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~------------------dg~~l 278 (368)
T 1mda_H 219 -ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLK------------------NTDGI 278 (368)
T ss_dssp -ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEET------------------TTTEE
T ss_pred -cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcC------------------CCCEE
Confidence 555666655556 8999999865321 111100 000 001134444 34445
Q ss_pred EEEeC---------CCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCC-EEEEEe-CCCeEEEEeCCCCccceeecccc
Q psy226 308 ATGSR---------DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK-YLVSCG-DDKTLRVWDTANKRNMKTLEAHS 376 (406)
Q Consensus 308 ~s~~~---------d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~-~l~sgs-~d~~i~vwd~~~~~~~~~l~~h~ 376 (406)
+.+.. ++.+.++|+.+.+.+..+.... ...+++|+|+|+ .+++.. .++.|.|+|+.+.+.++++....
T Consensus 279 yV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 279 MILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred EEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 54322 2356699999999887765433 578999999998 456666 59999999999999998887554
Q ss_pred ceEEEEEEeC
Q psy226 377 HFVTSLDFHR 386 (406)
Q Consensus 377 ~~v~~l~~~~ 386 (406)
. ...+++++
T Consensus 358 ~-P~~i~~~~ 366 (368)
T 1mda_H 358 G-PESLSVQN 366 (368)
T ss_dssp C-CCEEECCC
T ss_pred C-CCEEEeec
Confidence 3 34555544
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.34 E-value=5.1e-11 Score=108.38 Aligned_cols=261 Identities=10% Similarity=0.008 Sum_probs=166.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
.+.++...+++.+.+ ++.+ |..+|. +++....+...........+. +..|..++.++.+..+|.. ++......
T Consensus 61 ~~~~~~~~~~g~l~v-~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~ 133 (330)
T 3hxj_A 61 IECRPSIGKDGTIYF-GSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFK 133 (330)
T ss_dssp EEECCEETTTTEECC-SSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEE
T ss_pred cccceEEecCCcEEE-ecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEc
Confidence 345666666665444 4444 888885 554332222222223333333 4567788889999999988 77666665
Q ss_pred cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccce
Q psy226 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267 (406)
Q Consensus 188 ~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 267 (406)
.....+.++...+++. +..++.++.|..+|.. +.....+......+.++...+++.++++. +.+..+| .++...
T Consensus 134 ~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~ 207 (330)
T 3hxj_A 134 TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEK 207 (330)
T ss_dssp CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEE
T ss_pred CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEE
Confidence 5555566666766665 6667788999999998 87777766666667778888888765544 8899999 555544
Q ss_pred eEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCC
Q psy226 268 AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK 347 (406)
Q Consensus 268 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~ 347 (406)
.........+.++...+ ++ .+..++.++.|..+|. ++..+..+......+..+.+.++|.
T Consensus 208 ~~~~~~~~~~~~~~~~~------------------~g-~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~ 267 (330)
T 3hxj_A 208 WNFYAGYWTVTRPAISE------------------DG-TIYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT 267 (330)
T ss_dssp EEECCSSCCCSCCEECT------------------TS-CEEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC
T ss_pred EEEccCCcceeceEECC------------------CC-eEEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe
Confidence 33332222222222221 23 4666777888888874 6666666655444455566666664
Q ss_pred EEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 348 YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 348 ~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
|..++.+|.|..+|. +++.+..+......+.++...+++.+. .|+.+|.+.+..
T Consensus 268 -l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~-~gt~~G~~~~~~ 321 (330)
T 3hxj_A 268 -IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIY-FGTRNGKFYALF 321 (330)
T ss_dssp -EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEE-EECTTSCEEEEE
T ss_pred -EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEE-EEcCCCeEEEEe
Confidence 566778888999996 666655555445567777787887654 488899988764
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.27 E-value=5.1e-11 Score=108.36 Aligned_cols=255 Identities=12% Similarity=0.053 Sum_probs=161.4
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcce
Q psy226 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNV 193 (406)
Q Consensus 114 ~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v 193 (406)
+.+++ .+..++.++.|..|| .+++.......+...+.++...++|. |..++.+ +..+|. +++.+..........
T Consensus 27 ~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~ 100 (330)
T 3hxj_A 27 LAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIV 100 (330)
T ss_dssp ECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----
T ss_pred EccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcc
Confidence 43444 456677888999999 88887666555555667788877775 4444444 888886 444322222112122
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecC
Q psy226 194 TGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273 (406)
Q Consensus 194 ~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 273 (406)
....+. +..+..++.++.|..+|.. +........+...+.++...+++. ++.++.++.+..+|.. +.........
T Consensus 101 ~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~ 175 (330)
T 3hxj_A 101 SDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTN 175 (330)
T ss_dssp CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECS
T ss_pred cCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecC
Confidence 223333 5677888889999999988 777766666656667777777777 5567788999999987 5544443322
Q ss_pred CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEe
Q psy226 274 DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG 353 (406)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs 353 (406)
...+.++... .++. +..++ +.|..+| .+++....+......+.++..+++|.. ..++
T Consensus 176 ~~~~~~~~~d------------------~~g~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t 232 (330)
T 3hxj_A 176 DAITSAASIG------------------KDGT-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTS 232 (330)
T ss_dssp SCCCSCCEEC------------------TTCC-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEE
T ss_pred CCceeeeEEc------------------CCCE-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEc
Confidence 2222211111 1344 44444 7899999 788877777666667888888888765 4566
Q ss_pred CCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 354 DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 354 ~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
.++.|..+|. +++.+..+......+.++.+.+++. |..++.+|.|..+|
T Consensus 233 ~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 233 LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAIN 281 (330)
T ss_dssp TTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEEC
T ss_pred CCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEEC
Confidence 6788888874 4555544444433344556665664 55577787787776
No 236
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.26 E-value=2.6e-08 Score=87.74 Aligned_cols=250 Identities=11% Similarity=0.009 Sum_probs=150.7
Q ss_pred EEEEEeCCCcEEEEEcCCCcE-----EEEecccccCeeeEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEecCCcce
Q psy226 120 LMASCSEDATIRLWDYETGEY-----ERALHGHLDSVQDIAFDQSGKLLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNV 193 (406)
Q Consensus 120 ~latgs~dg~v~vwd~~~~~~-----~~~~~~h~~~V~~l~~~~~g~~l~sg-s~d~~i~vwd~~~~~~~~~~~~h~~~v 193 (406)
+|..+.. +.|+.+++..... ...+......+.+++|++++..|+.+ ..++.|..++..+..............
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 3444332 4788888776532 11222223457789999976655544 456899999987654433333223467
Q ss_pred EEEEEecCCCEEEEE-eCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeC---CCeEEEEeCCCccceeE
Q psy226 194 TGVAFLPNSDFVLSA-SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN---DHTARVWSLATKETKAE 269 (406)
Q Consensus 194 ~~~~~~p~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~---d~~v~vwd~~~~~~~~~ 269 (406)
.++++.|++..|+.+ ...+.|.+++...................++++|++..+..+.. .+.|..+++........
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 899999976655544 45678999998644322222222245688999996555544443 46888888764332211
Q ss_pred EecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEE
Q psy226 270 LRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYL 349 (406)
Q Consensus 270 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l 349 (406)
..........+++.|+ ++.+.++-...+.|..+|.........+.+ ......++.. .+..+
T Consensus 162 ~~~~~~~P~gia~d~~-----------------~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~ly 222 (267)
T 1npe_A 162 AQDNLGLPNGLTFDAF-----------------SSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLY 222 (267)
T ss_dssp ECTTCSCEEEEEEETT-----------------TTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEE
T ss_pred EECCCCCCcEEEEcCC-----------------CCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEE
Confidence 2122234566777652 233445555667899999875443333332 2345677764 34444
Q ss_pred EEEeCCCeEEEEeCCCCccceeecccc-ceEEEEEEeCCCC
Q psy226 350 VSCGDDKTLRVWDTANKRNMKTLEAHS-HFVTSLDFHRAHP 389 (406)
Q Consensus 350 ~sgs~d~~i~vwd~~~~~~~~~l~~h~-~~v~~l~~~~~~~ 389 (406)
++...++.|.++|..+++.+.++.... .....+++.|+++
T Consensus 223 va~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 223 YTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 454566899999999988888876433 2356788888765
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.19 E-value=2.2e-09 Score=103.00 Aligned_cols=255 Identities=11% Similarity=0.069 Sum_probs=164.8
Q ss_pred EEEEEeCCCcEEEEEcCCCcEEEEecc---------------------------------cc------cCeeeEEECC--
Q psy226 120 LMASCSEDATIRLWDYETGEYERALHG---------------------------------HL------DSVQDIAFDQ-- 158 (406)
Q Consensus 120 ~latgs~dg~v~vwd~~~~~~~~~~~~---------------------------------h~------~~V~~l~~~~-- 158 (406)
.+.||+..|.|+|+-+.+++.++.+.- +. +.......|.
T Consensus 17 ~f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~ 96 (595)
T 1fwx_A 17 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 96 (595)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEET
T ss_pred EEeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCC
Confidence 466888999999999998887665421 00 1112244444
Q ss_pred ---CCCEEEEEeC-CCcEEEEeCCCCeEEEEEecC-CcceEEEEE-e-cCCCEEEEEe------------------CCCc
Q psy226 159 ---SGKLLVSCSA-DMSLKLWDMSTYQCLKTMQGH-DHNVTGVAF-L-PNSDFVLSAS------------------RDKT 213 (406)
Q Consensus 159 ---~g~~l~sgs~-d~~i~vwd~~~~~~~~~~~~h-~~~v~~~~~-~-p~~~~l~s~s------------------~d~~ 213 (406)
||++|..... +..|.+.|+.++++.+.+.-. ......+++ . |+++++++++ .++.
T Consensus 97 g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 97 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7787777665 457999999999988855432 245788888 4 9999998884 3467
Q ss_pred EEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCC---------------eEEEEe------------------
Q psy226 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH---------------TARVWS------------------ 260 (406)
Q Consensus 214 i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~---------------~v~vwd------------------ 260 (406)
+.+.|..+.+...++.-.. ....++++|+|+++++.+.+. .+.+.|
T Consensus 177 vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999999988877765322 345678999999998888553 344444
Q ss_pred -----CCC--ccc-eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEe-CCCcEEEEECCCCe------
Q psy226 261 -----LAT--KET-KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGS-RDKTIKLWDVGSGS------ 325 (406)
Q Consensus 261 -----~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~lwd~~~~~------ 325 (406)
..+ ... ...+.. .....++.++| +|+++++++ .+++|.++|+.+.+
T Consensus 256 V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sP------------------DGk~v~V~~~~s~~VsVid~~~~~~~~~~~ 316 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPI-ANNPHGCNMAP------------------DKKHLCVAGKLSPTVTVLDVTRFDAVFYEN 316 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEE-ESSCCCEEECT------------------TSSEEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred EEEEeCcccCCceeEEEEec-CCCceEEEEcC------------------CCCEEEEeCCCCCeEEEEECcccccccccc
Confidence 332 111 111110 01112233333 566655554 67899999998642
Q ss_pred ------EEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCC----------CccceeeccccceE-----EEEEE
Q psy226 326 ------LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN----------KRNMKTLEAHSHFV-----TSLDF 384 (406)
Q Consensus 326 ------~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~----------~~~~~~l~~h~~~v-----~~l~~ 384 (406)
.+..+. -......++|+|+|...++.--|+.|.+||+.. .+.+.++..|-.+- ..+.+
T Consensus 317 l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~ 395 (595)
T 1fwx_A 317 ADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETL 395 (595)
T ss_dssp CCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTST
T ss_pred cCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEe
Confidence 333332 234578899999994445667899999999876 45566666554321 12346
Q ss_pred eCCCCEEEEee
Q psy226 385 HRAHPYVVTGS 395 (406)
Q Consensus 385 ~~~~~~l~sgs 395 (406)
+|||++|++..
T Consensus 396 ~~DGk~l~~~N 406 (595)
T 1fwx_A 396 DATNDWLVCLS 406 (595)
T ss_dssp TCCSSEEEEEE
T ss_pred CCCCCEEEEcC
Confidence 89999998753
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.18 E-value=1.8e-08 Score=93.55 Aligned_cols=229 Identities=7% Similarity=0.074 Sum_probs=144.9
Q ss_pred CCCCEEE-EEeCCCcEEEEEcCCC----cEEEEec-------ccccCeeeEEECCCCCEEEEEeCC------CcEEEEeC
Q psy226 116 PVFSLMA-SCSEDATIRLWDYETG----EYERALH-------GHLDSVQDIAFDQSGKLLVSCSAD------MSLKLWDM 177 (406)
Q Consensus 116 p~~~~la-tgs~dg~v~vwd~~~~----~~~~~~~-------~h~~~V~~l~~~~~g~~l~sgs~d------~~i~vwd~ 177 (406)
++.++|+ +|..+++|.|+|+.+. +..+++. .....-..+...|+| +++++..+ +.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 6766555 6777899999999765 5666663 011234567888999 77776665 78999999
Q ss_pred CCCeEEEEEecCCcc---eEEEEEecCCCEEEEEe-------------------CCCcEEEEEcCCCeEEEEeecCC--c
Q psy226 178 STYQCLKTMQGHDHN---VTGVAFLPNSDFVLSAS-------------------RDKTIKMWEVATGYCVKTLTGHR--E 233 (406)
Q Consensus 178 ~~~~~~~~~~~h~~~---v~~~~~~p~~~~l~s~s-------------------~d~~i~iwd~~~~~~~~~~~~~~--~ 233 (406)
.+++.+.++.....+ -..+.|+|+++.+++.. .+.+|.+||+.+++.++++.... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 999998888632221 33578899999888874 37899999999988888776531 2
Q ss_pred cEEEEEE--CCCCCEEEEEe------CCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccc----------ccc
Q psy226 234 WVRQIKV--SPDGTLLASCS------NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS----------EAA 295 (406)
Q Consensus 234 ~v~~l~~--~~~~~~l~s~~------~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~ 295 (406)
....+.| +|+++++..++ .+++|.+|....+.- ... ..+...+......+. ...
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~-~~~-------~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW-NAE-------KVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE-EEE-------EEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCce-eEE-------EEEeCCCccccccccccccccccCCCce
Confidence 3345555 99999877665 567888876643211 000 001110000000000 000
Q ss_pred CCCCCCCCCCEEEEEeC-CCcEEEEECCC---CeEEEEEeCCC--------------cCEEEEEEcCCCCEEEEEe
Q psy226 296 GRPPGQGGGPYLATGSR-DKTIKLWDVGS---GSLLFTLIGHD--------------NWVRGVTFHPGGKYLVSCG 353 (406)
Q Consensus 296 ~~~~~~~~~~~l~s~~~-d~~i~lwd~~~---~~~~~~~~~h~--------------~~v~~l~~s~~g~~l~sgs 353 (406)
.......+|++|.++.. .+.|.+||+.. .+.+..+.-.. ..-..+.++|||++|+++.
T Consensus 324 a~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 324 TDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 11112336778877765 67899999852 34554443210 1357899999999998887
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.17 E-value=1.2e-07 Score=88.03 Aligned_cols=219 Identities=13% Similarity=0.082 Sum_probs=145.1
Q ss_pred CCCCEEEE-EeCCCcEEEEeCCCC----eEEEEEec-------CCcceEEEEEecCCCEEEEEeCC------CcEEEEEc
Q psy226 158 QSGKLLVS-CSADMSLKLWDMSTY----QCLKTMQG-------HDHNVTGVAFLPNSDFVLSASRD------KTIKMWEV 219 (406)
Q Consensus 158 ~~g~~l~s-gs~d~~i~vwd~~~~----~~~~~~~~-------h~~~v~~~~~~p~~~~l~s~s~d------~~i~iwd~ 219 (406)
.++++|+. |..++.|.++|+.+. +..+++.. -...-..+...|+| .++++..+ +.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 77777665 556789999999754 56666630 11134557788999 77776555 78999999
Q ss_pred CCCeEEEEeecCC---ccEEEEEECCCCCEEEEEe-------------------CCCeEEEEeCCCccceeEEecC-C-c
Q psy226 220 ATGYCVKTLTGHR---EWVRQIKVSPDGTLLASCS-------------------NDHTARVWSLATKETKAELRGH-D-H 275 (406)
Q Consensus 220 ~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~s~~-------------------~d~~v~vwd~~~~~~~~~~~~~-~-~ 275 (406)
.+++.+....... ..-..+.|+|+++.+++.. .+.+|.+||+.+.+....+..- . .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 9999888876322 2234578899999888874 4789999999987666665542 1 2
Q ss_pred eEEEEEe--CCCCCccccccccCCCCCCCCCCEEEEEe------CCCcEEEEECCCCeEE--EE--EeCC----------
Q psy226 276 TVECVAW--APGVASESISEAAGRPPGQGGGPYLATGS------RDKTIKLWDVGSGSLL--FT--LIGH---------- 333 (406)
Q Consensus 276 ~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~~------~d~~i~lwd~~~~~~~--~~--~~~h---------- 333 (406)
....+.| +| ++.++++++ .+++|.+|....+... .. +...
T Consensus 252 ~P~~i~f~~~P------------------dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~ 313 (462)
T 2ece_A 252 MALELRPLHDP------------------TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEIL 313 (462)
T ss_dssp EEEEEEECSST------------------TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGG
T ss_pred ccceeEeeECC------------------CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccc
Confidence 2334444 55 455666655 4567877655444311 11 1110
Q ss_pred ------CcCEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCC---ccceeecccc--------------ceEEEEEEeCCCC
Q psy226 334 ------DNWVRGVTFHPGGKYLVSCG-DDKTLRVWDTANK---RNMKTLEAHS--------------HFVTSLDFHRAHP 389 (406)
Q Consensus 334 ------~~~v~~l~~s~~g~~l~sgs-~d~~i~vwd~~~~---~~~~~l~~h~--------------~~v~~l~~~~~~~ 389 (406)
......+.+||||++|.++. ..+.|.++|+... +.+..+.... ..-..++++|+|+
T Consensus 314 ~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk 393 (462)
T 2ece_A 314 KPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGR 393 (462)
T ss_dssp GGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSS
T ss_pred cccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCC
Confidence 23478899999999987665 4789999998633 3344443221 0247889999999
Q ss_pred EEEEee
Q psy226 390 YVVTGS 395 (406)
Q Consensus 390 ~l~sgs 395 (406)
+|.++.
T Consensus 394 ~LyVaN 399 (462)
T 2ece_A 394 RVYVTN 399 (462)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 988776
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=7.6e-09 Score=103.41 Aligned_cols=275 Identities=13% Similarity=0.124 Sum_probs=173.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEecccccC----------e-eeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGHLDS----------V-QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~----------V-~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
+..|+.++.++.|.-+|..+|+.+-.+...... + ..+++ .+..++.++.|+.+..+|..+++.+...
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 567777888999999999999988776533211 1 12233 3567888899999999999999988776
Q ss_pred ecCC----cceEE-EEEecCCCEEEEEeC------CCcEEEEEcCCCeEEEEeecC---Cc-------------------
Q psy226 187 QGHD----HNVTG-VAFLPNSDFVLSASR------DKTIKMWEVATGYCVKTLTGH---RE------------------- 233 (406)
Q Consensus 187 ~~h~----~~v~~-~~~~p~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~---~~------------------- 233 (406)
.... ..+.+ ... .+..++.+.. ++.|..+|..+|+.+..+... ..
T Consensus 144 ~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 5421 11111 111 1345555543 589999999999988776521 00
Q ss_pred ---------cEEEEEECCCCCEEEEEeCCCe-------------------EEEEeCCCccceeEEecCCceEEEEEeCCC
Q psy226 234 ---------WVRQIKVSPDGTLLASCSNDHT-------------------ARVWSLATKETKAELRGHDHTVECVAWAPG 285 (406)
Q Consensus 234 ---------~v~~l~~~~~~~~l~s~~~d~~-------------------v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 285 (406)
....++++|++.+++.++.++. |..+|..+++.+-.+....+.. |..+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~----wd~~ 297 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS----WDFT 297 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC----SCCC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcc----cccc
Confidence 0124678888888888877663 8999999888765554311100 0000
Q ss_pred CCccccccccCCCCCCCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCE------------------------
Q psy226 286 VASESISEAAGRPPGQGGG---PYLATGSRDKTIKLWDVGSGSLLFTLIGHD-NWV------------------------ 337 (406)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~---~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~-~~v------------------------ 337 (406)
.....+... ...+| ..++.++.+|.+.++|..+|+.+....-.. .+.
T Consensus 298 ~~~~~~~~d-----~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~ 372 (668)
T 1kv9_A 298 ATQQITLAE-----LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIV 372 (668)
T ss_dssp CCSCEEEEE-----EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEE
T ss_pred CCCCcEEEE-----eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeE
Confidence 000000000 00012 268889999999999999999885433211 011
Q ss_pred -----------EEEEEcCCCCEEEEE------------------------------------eCCCeEEEEeCCCCccce
Q psy226 338 -----------RGVTFHPGGKYLVSC------------------------------------GDDKTLRVWDTANKRNMK 370 (406)
Q Consensus 338 -----------~~l~~s~~g~~l~sg------------------------------------s~d~~i~vwd~~~~~~~~ 370 (406)
..++++|+...++.. ..+|.|..||..+++.+-
T Consensus 373 ~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W 452 (668)
T 1kv9_A 373 MWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAW 452 (668)
T ss_dssp ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEE
T ss_pred ECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEE
Confidence 125778876665542 134889999999998765
Q ss_pred eeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 371 ~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
+...+. ......+...+.+|+.|+.||.++.||.+
T Consensus 453 ~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 453 KVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp EEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EccCCC-CCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 554322 22333455567889999999999999853
No 241
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.11 E-value=9.6e-09 Score=102.69 Aligned_cols=275 Identities=13% Similarity=0.084 Sum_probs=162.7
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEecccc----cCeee-EEECCCCCEEEEEeC------CCcEEEEeCCCCeEEEEE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGHL----DSVQD-IAFDQSGKLLVSCSA------DMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h~----~~V~~-l~~~~~g~~l~sgs~------d~~i~vwd~~~~~~~~~~ 186 (406)
+..++.++.|+.|..+|..+|+......... ..+.+ ..+ .+..++.+.. ++.|..+|..+++.+..+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 4578888899999999999999876654321 11111 111 1334555543 589999999999988776
Q ss_pred ecC--C-c----------------------------ceEEEEEecCCCEEEEEeCCC-------------------cEEE
Q psy226 187 QGH--D-H----------------------------NVTGVAFLPNSDFVLSASRDK-------------------TIKM 216 (406)
Q Consensus 187 ~~h--~-~----------------------------~v~~~~~~p~~~~l~s~s~d~-------------------~i~i 216 (406)
... . . ....+++.|..+.++.++.++ .|..
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~A 274 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILA 274 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 421 0 0 012468888888888887766 3999
Q ss_pred EEcCCCeEEEEeec--CC-------ccEEEEEECCCCC---EEEEEeCCCeEEEEeCCCccceeEEecCCce-EEE----
Q psy226 217 WEVATGYCVKTLTG--HR-------EWVRQIKVSPDGT---LLASCSNDHTARVWSLATKETKAELRGHDHT-VEC---- 279 (406)
Q Consensus 217 wd~~~~~~~~~~~~--~~-------~~v~~l~~~~~~~---~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~-v~~---- 279 (406)
+|..+|+.+..++. |. .+.....+..+|+ .++.++.+|.++++|..+++.+........+ ...
T Consensus 275 lD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~ 354 (668)
T 1kv9_A 275 IRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLA 354 (668)
T ss_dssp ECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTT
T ss_pred EcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccc
Confidence 99999998877764 32 1222222333565 6889999999999999998876443322100 000
Q ss_pred -------------------------------EEeCCCCCcccccc-----------ccCCC-CCCCCC-----CEEE-EE
Q psy226 280 -------------------------------VAWAPGVASESISE-----------AAGRP-PGQGGG-----PYLA-TG 310 (406)
Q Consensus 280 -------------------------------~~~~~~~~~~~~~~-----------~~~~~-~~~~~~-----~~l~-s~ 310 (406)
++++|......+.. ....+ .....+ ...+ ..
T Consensus 355 ~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~ 434 (668)
T 1kv9_A 355 TGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAA 434 (668)
T ss_dssp TCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGG
T ss_pred cCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCC
Confidence 11111100000000 00000 000000 0000 12
Q ss_pred eCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceE-EEEEEeCCCC
Q psy226 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV-TSLDFHRAHP 389 (406)
Q Consensus 311 ~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v-~~l~~~~~~~ 389 (406)
..+|.|.-||+.+|+.+-....+.. .....+...+..|+.|+.|+.+++||..+++.+..+....... .-+.+..+++
T Consensus 435 ~~~g~l~A~D~~tG~~~W~~~~~~~-~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~ 513 (668)
T 1kv9_A 435 VVSGALLAWDPVKQKAAWKVPYPTH-WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR 513 (668)
T ss_dssp GCEEEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CccceEEEEeCCCCcEEEEccCCCC-CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCE
Confidence 2458899999999998877654332 2223344567889999999999999999999887775443211 2233444555
Q ss_pred -EEEEee
Q psy226 390 -YVVTGS 395 (406)
Q Consensus 390 -~l~sgs 395 (406)
|++.++
T Consensus 514 ~yva~~~ 520 (668)
T 1kv9_A 514 QYVAIMA 520 (668)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 565554
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.07 E-value=1.6e-06 Score=88.60 Aligned_cols=269 Identities=10% Similarity=0.112 Sum_probs=173.9
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec-ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy226 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
|.++...+++.+.+ |..++.|..||..++++..... .+...|.++...++|.+.+ |+.++-+.+||..+.+......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeec
Confidence 78888887776655 5555568899988877654321 2345788888888777555 4444348889988765443222
Q ss_pred c-------CCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeec-------CCccEEEEEECCCCCEEEEEeCC
Q psy226 188 G-------HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG-------HREWVRQIKVSPDGTLLASCSND 253 (406)
Q Consensus 188 ~-------h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~l~~~~~~~~l~s~~~d 253 (406)
. ....|.++...++|.+.+ |+.+ -|.+||..++........ ....|.++..+++|. +..|+.+
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~ 329 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYF 329 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESS
T ss_pred CCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECC
Confidence 1 135689998888777554 4455 588999877754433211 235699999999887 5567777
Q ss_pred CeEEEEeCCCccceeEEec-------CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeE
Q psy226 254 HTARVWSLATKETKAELRG-------HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSL 326 (406)
Q Consensus 254 ~~v~vwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 326 (406)
+-|..++..+..... +.. ....|.++...+ .| .|..|+.++-|..||..++..
T Consensus 330 ~Gl~~~~~~~~~~~~-~~~~~~~~~l~~~~V~~i~~d~------------------~g-~lWiGt~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 330 GGLNYYHPIRNRFKN-IRNIPYKNSLSDNVVSCIVEDK------------------DK-NLWIGTNDGGLNLYNPITQRF 389 (795)
T ss_dssp SCEEEECGGGGSSEE-ECCCTTSSSCSCSSEEEEEECT------------------TS-CEEEEESSSCEEEECTTTCCE
T ss_pred CCeEEeCCCcccceE-EcCCCCCCCCCCCeeEEEEECC------------------CC-CEEEEECCCCeEEEcCCCCcE
Confidence 888899875543221 111 123455555443 23 366688887899999887765
Q ss_pred EEEEeC--------CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeec-----cccceEEEEEEeCCCCEEEE
Q psy226 327 LFTLIG--------HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE-----AHSHFVTSLDFHRAHPYVVT 393 (406)
Q Consensus 327 ~~~~~~--------h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~-----~h~~~v~~l~~~~~~~~l~s 393 (406)
...... ....|.++..+++|+.|..|+.++-|.+||..+++.. .+. .....|.++...+++.+.+.
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwig 468 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLG 468 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEE
Confidence 432211 2357999999999985666777777999998876532 221 13457999999998886664
Q ss_pred eeCCCeEEEeec
Q psy226 394 GSVDKTVKVWEC 405 (406)
Q Consensus 394 gs~Dg~v~iw~~ 405 (406)
. .+| +.+|+.
T Consensus 469 t-~~G-l~~~~~ 478 (795)
T 4a2l_A 469 T-LSA-LVRFNP 478 (795)
T ss_dssp E-SSC-EEEEET
T ss_pred e-cCc-eeEEeC
Confidence 4 344 666653
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.07 E-value=3e-07 Score=80.84 Aligned_cols=219 Identities=16% Similarity=0.095 Sum_probs=137.9
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEEE
Q psy226 108 PVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSC-SADMSLKLWDMSTYQCLKT 185 (406)
Q Consensus 108 ~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sg-s~d~~i~vwd~~~~~~~~~ 185 (406)
.+..++++|++. ++++-..++.|.++|..++.....+.........+++++++..|+.+ ...+.|.++++........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 467899999755 55555667899999998765444443333567899999976655544 4567899999864332222
Q ss_pred EecCCcceEEEEEecCCCEEEEEeC---CCcEEEEEcCCCeEEEEe-ecCCccEEEEEECCCCCEE-EEEeCCCeEEEEe
Q psy226 186 MQGHDHNVTGVAFLPNSDFVLSASR---DKTIKMWEVATGYCVKTL-TGHREWVRQIKVSPDGTLL-ASCSNDHTARVWS 260 (406)
Q Consensus 186 ~~~h~~~v~~~~~~p~~~~l~s~s~---d~~i~iwd~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l-~s~~~d~~v~vwd 260 (406)
..........++++|++..|+.+.. .+.|..+++.... ...+ ...-.....++++|++..| ++-...+.|.++|
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 2222245689999997666655543 3678888875432 2222 2333467889999987655 5555678999999
Q ss_pred CCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-cCEEE
Q psy226 261 LATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD-NWVRG 339 (406)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~-~~v~~ 339 (406)
+........+.....+ ..++.. .+..+++....+.|..+|..+++.+..+.... .....
T Consensus 196 ~~g~~~~~~~~~~~~P-~gi~~d-------------------~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~g 255 (267)
T 1npe_A 196 PAQPGRRKVLEGLQYP-FAVTSY-------------------GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYG 255 (267)
T ss_dssp TTEEEEEEEEECCCSE-EEEEEE-------------------TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCC
T ss_pred cCCCceEEEecCCCCc-eEEEEe-------------------CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccce
Confidence 8754332222211111 222221 23344444456899999999999888775432 24667
Q ss_pred EEEcCCCC
Q psy226 340 VTFHPGGK 347 (406)
Q Consensus 340 l~~s~~g~ 347 (406)
+++.|++.
T Consensus 256 i~~~~~~~ 263 (267)
T 1npe_A 256 ITIALSQC 263 (267)
T ss_dssp EEEECSCC
T ss_pred eeecCccC
Confidence 88888764
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.05 E-value=3e-06 Score=86.64 Aligned_cols=271 Identities=12% Similarity=0.116 Sum_probs=175.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc-------cccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHG-------HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~-------h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
...|.++...+++.+.+. ..++-+..||..+++....... ....|.++...++|.+.+ |+.+ -+.+||..
T Consensus 214 ~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCC
Confidence 456888888887776554 4444588999888776544322 135699999998887655 4445 58899988
Q ss_pred CCeEEEEEec-------CCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeec-------CCccEEEEEECCCC
Q psy226 179 TYQCLKTMQG-------HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG-------HREWVRQIKVSPDG 244 (406)
Q Consensus 179 ~~~~~~~~~~-------h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-------~~~~v~~l~~~~~~ 244 (406)
+++....... ....|.++...++|. |..|+.++-|..|+..++... .+.. ....|.++..+++|
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g 368 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDK 368 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTS
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCC
Confidence 7664432211 235689998888776 556777778899987655322 2211 23468999999888
Q ss_pred CEEEEEeCCCeEEEEeCCCccceeEEec--------CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcE
Q psy226 245 TLLASCSNDHTARVWSLATKETKAELRG--------HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTI 316 (406)
Q Consensus 245 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 316 (406)
. |..|+.++-|..||..+......... ....|.++...+ .+..|..|+.++-|
T Consensus 369 ~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~------------------~g~~lWigt~~~Gl 429 (795)
T 4a2l_A 369 N-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE------------------KKSLVYIGTHAGGL 429 (795)
T ss_dssp C-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET------------------TTTEEEEEETTTEE
T ss_pred C-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC------------------CCCEEEEEeCcCce
Confidence 7 55577887899999876543221111 123455555433 34436677887789
Q ss_pred EEEECCCCeEEEEEe----CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeec------cccceEEEEEEeC
Q psy226 317 KLWDVGSGSLLFTLI----GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE------AHSHFVTSLDFHR 386 (406)
Q Consensus 317 ~lwd~~~~~~~~~~~----~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~------~h~~~v~~l~~~~ 386 (406)
..||..+++...... .+...|.++...++|...+... + -+.+||..+++...... .....|.++...+
T Consensus 430 ~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 430 SILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT
T ss_pred eEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECC
Confidence 999998876543321 1345799999999888766544 4 48889987654322111 1235799999999
Q ss_pred CCCEEEEeeCCCeEEEee
Q psy226 387 AHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 387 ~~~~l~sgs~Dg~v~iw~ 404 (406)
++.+.+... +| +..|+
T Consensus 508 ~g~lWigt~-~G-l~~~~ 523 (795)
T 4a2l_A 508 HKRLWIGGE-EG-LSVFK 523 (795)
T ss_dssp TCCEEEEES-SC-EEEEE
T ss_pred CCCEEEEeC-Cc-eEEEe
Confidence 998766544 44 66665
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.05 E-value=4e-07 Score=82.48 Aligned_cols=241 Identities=9% Similarity=0.030 Sum_probs=147.9
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec-------------------ccccCeeeEEECC-CC
Q psy226 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-------------------GHLDSVQDIAFDQ-SG 160 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~-------------------~h~~~V~~l~~~~-~g 160 (406)
.+.+.-....++++.|+++++.++..++.|..||..+++...... .....+.++++.+ +|
T Consensus 13 ~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 13 LIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp EEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred ecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 344433345678899999988889899999999988765543211 0113578899997 55
Q ss_pred CEEEEEeCCCcEEEEeCCCCeEEEEEec-----CCcceEEEEEec-CCCEEEEEeC-----------------CCcEEEE
Q psy226 161 KLLVSCSADMSLKLWDMSTYQCLKTMQG-----HDHNVTGVAFLP-NSDFVLSASR-----------------DKTIKMW 217 (406)
Q Consensus 161 ~~l~sgs~d~~i~vwd~~~~~~~~~~~~-----h~~~v~~~~~~p-~~~~l~s~s~-----------------d~~i~iw 217 (406)
+ |+.+...+.|..+|..++.. ..+.. .......+++.| +|++.++-.. ++.|..+
T Consensus 93 ~-l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 93 Q-LYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp E-EEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred c-EEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 5 55555555588888776532 22211 112467899999 8887666432 3678888
Q ss_pred EcCCCeEEEEeecCCccEEEEEECCCCCEEEEE-eCCCeEEEEeCCCccc--eeEEecCCceEEEEEeCCCCCccccccc
Q psy226 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASC-SNDHTARVWSLATKET--KAELRGHDHTVECVAWAPGVASESISEA 294 (406)
Q Consensus 218 d~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~v~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 294 (406)
|..++....... .-.....++++|+|+.++.+ ...+.|.+|++..... ...+..... ...++..+
T Consensus 171 d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~---------- 238 (322)
T 2fp8_A 171 DPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA---------- 238 (322)
T ss_dssp ETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT----------
T ss_pred eCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC----------
Confidence 887765433222 22335679999999866544 5678999999875321 111111111 34444443
Q ss_pred cCCCCCCCCCCEEEEEeC----------CCcEEEEECCCCeEEEEEeCC----CcCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy226 295 AGRPPGQGGGPYLATGSR----------DKTIKLWDVGSGSLLFTLIGH----DNWVRGVTFHPGGKYLVSCGDDKTLRV 360 (406)
Q Consensus 295 ~~~~~~~~~~~~l~s~~~----------d~~i~lwd~~~~~~~~~~~~h----~~~v~~l~~s~~g~~l~sgs~d~~i~v 360 (406)
+|.+.++... .+.|..+|. .++.+..+... ...++++++ .+++.+++...++.|.+
T Consensus 239 --------~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 239 --------DGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGI 308 (322)
T ss_dssp --------TSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEE
T ss_pred --------CCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEE
Confidence 3555555433 456888886 46766666543 245677776 46666666667888999
Q ss_pred EeCCC
Q psy226 361 WDTAN 365 (406)
Q Consensus 361 wd~~~ 365 (406)
+++..
T Consensus 309 ~~~~~ 313 (322)
T 2fp8_A 309 LVYDK 313 (322)
T ss_dssp EEC--
T ss_pred Eeccc
Confidence 98753
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.04 E-value=2.1e-08 Score=96.18 Aligned_cols=231 Identities=11% Similarity=0.077 Sum_probs=155.3
Q ss_pred CCCCEEEEEeC-CCcEEEEEcCCCcEEEEeccc-ccCeeeEEE-C-CCCCEEEEEe------------------CCCcEE
Q psy226 116 PVFSLMASCSE-DATIRLWDYETGEYERALHGH-LDSVQDIAF-D-QSGKLLVSCS------------------ADMSLK 173 (406)
Q Consensus 116 p~~~~latgs~-dg~v~vwd~~~~~~~~~~~~h-~~~V~~l~~-~-~~g~~l~sgs------------------~d~~i~ 173 (406)
|||+++..+.. ++.|.+-|+.+.+..+.+.-- ......+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47777776555 557999999999987755322 245778888 5 8999998884 346799
Q ss_pred EEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCC--------------------------------------cEE
Q psy226 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK--------------------------------------TIK 215 (406)
Q Consensus 174 vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~--------------------------------------~i~ 215 (406)
+.|..+.+....+.--. .-..++++|+|+++++.+.+. .|.
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 99999988877765322 446678999999988887553 356
Q ss_pred EEEcCC--CeE-EEEeecCCccEEEEEECCCCCEEEEEe-CCCeEEEEeCCCccc------------eeEEecCCceEEE
Q psy226 216 MWEVAT--GYC-VKTLTGHREWVRQIKVSPDGTLLASCS-NDHTARVWSLATKET------------KAELRGHDHTVEC 279 (406)
Q Consensus 216 iwd~~~--~~~-~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~v~vwd~~~~~~------------~~~~~~~~~~v~~ 279 (406)
+.|.++ +.. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+. ..... -.....-
T Consensus 258 VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h 335 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLH 335 (595)
T ss_dssp EEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEE
T ss_pred EEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcce
Confidence 666665 333 333322 12345789999999876655 689999999986421 11111 1233456
Q ss_pred EEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC----------CeEEEEEeCCCcCE-----EEEEEcC
Q psy226 280 VAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS----------GSLLFTLIGHDNWV-----RGVTFHP 344 (406)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~----------~~~~~~~~~h~~~v-----~~l~~s~ 344 (406)
++|+| +|...++...|++|.+||+.+ .+.+..+.-|-.+- .++.++|
T Consensus 336 ~aF~~------------------dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~ 397 (595)
T 1fwx_A 336 TAFDG------------------RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA 397 (595)
T ss_dssp EEECT------------------TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC
T ss_pred EEECC------------------CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC
Confidence 67776 354455667799999999876 55666766554321 2235689
Q ss_pred CCCEEEEEe---CCCeE----------EEEeCCCCc
Q psy226 345 GGKYLVSCG---DDKTL----------RVWDTANKR 367 (406)
Q Consensus 345 ~g~~l~sgs---~d~~i----------~vwd~~~~~ 367 (406)
||++|++.. .|+.+ .++|+..++
T Consensus 398 DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 398 TNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred CCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 999999864 35431 788985544
No 247
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.04 E-value=9.3e-08 Score=83.34 Aligned_cols=193 Identities=10% Similarity=0.043 Sum_probs=136.2
Q ss_pred eEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCcEEEEeccc-ccCeeeEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEE
Q psy226 109 VIKVIFHPVFSLMASCSE--DATIRLWDYETGEYERALHGH-LDSVQDIAFDQSGKLLVSC-SADMSLKLWDMSTYQCLK 184 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~--dg~v~vwd~~~~~~~~~~~~h-~~~V~~l~~~~~g~~l~sg-s~d~~i~vwd~~~~~~~~ 184 (406)
...++|+|++.++++.+. ++.|++.|..+++....+.-. ......+++. |+.|..+ -.++.+.++|..+++.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998766666553 689999999999988876521 1223345554 4455544 467899999999999888
Q ss_pred EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCC-----ccEEEEEECCCCCEEEEEeCCCeEEEE
Q psy226 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHR-----EWVRQIKVSPDGTLLASCSNDHTARVW 259 (406)
Q Consensus 185 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~-----~~v~~l~~~~~~~~l~s~~~d~~v~vw 259 (406)
++..-... ...+.++++.++++..++.|.++|..+.+.+..+.-.. ...+.+.+. +|..++....++.|.+.
T Consensus 101 ~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 101 NFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 87532111 23356688877777778899999999988777765321 135677777 77666666678999999
Q ss_pred eCCCccceeEEecC-------------CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC
Q psy226 260 SLATKETKAELRGH-------------DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS 323 (406)
Q Consensus 260 d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~ 323 (406)
|..+++.+..+... ......++|.|+ ...+++++...+.|...++..
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~-----------------~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE-----------------NKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT-----------------TTEEEEEETTCSEEEEEEEEE
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC-----------------CCEEEEECCCCCeEEEEEEec
Confidence 99998877766531 124578888874 345677777788887777643
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=1.6e-07 Score=81.83 Aligned_cols=201 Identities=9% Similarity=0.060 Sum_probs=134.2
Q ss_pred eEEEEEecCCc--ceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEEeecC-CccEEEEEECCCCCEEEEEeCCCe
Q psy226 181 QCLKTMQGHDH--NVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKTLTGH-REWVRQIKVSPDGTLLASCSNDHT 255 (406)
Q Consensus 181 ~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~s~~~d~~ 255 (406)
+.+.++. |.. ...++.|+|++.+.++.+. ++.|.+.|..+++.+..+.-. ......+++.. +.+.++.-.++.
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCE
Confidence 4455553 443 3579999998644444433 579999999999988886532 22334555542 344455557899
Q ss_pred EEEEeCCCccceeEEecC-CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC
Q psy226 256 ARVWSLATKETKAELRGH-DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334 (406)
Q Consensus 256 v~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~ 334 (406)
+.++|..+.+.+..+... ... ..+++ ++..++++..++.|.++|..+.+.+..+.-..
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g-~glt~--------------------Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG-WGLAT--------------------DGKILYGSDGTSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC-CEEEE--------------------CSSSEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred EEEEECCCCcEEEEEECCCCCe-EEEEE--------------------CCCEEEEECCCCeEEEEECCCCcEEEEEEECC
Confidence 999999988777665422 111 11211 23445555578899999999988877765211
Q ss_pred -----cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecccc-------------ceEEEEEEeCCCC-EEEEee
Q psy226 335 -----NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS-------------HFVTSLDFHRAHP-YVVTGS 395 (406)
Q Consensus 335 -----~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~-------------~~v~~l~~~~~~~-~l~sgs 395 (406)
..+..+.|. +|+..+....++.|.+.|..+++.+..+.... ...+.++|+|+++ +++++.
T Consensus 147 ~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 147 NGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred CCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 136778888 67655566568899999999999888875321 3568999999986 556777
Q ss_pred CCCeEEEeec
Q psy226 396 VDKTVKVWEC 405 (406)
Q Consensus 396 ~Dg~v~iw~~ 405 (406)
..+.|..-++
T Consensus 226 ~~~~v~~i~l 235 (266)
T 2iwa_A 226 LWPKLFEIKL 235 (266)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 7777776554
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.97 E-value=4.4e-07 Score=88.96 Aligned_cols=277 Identities=14% Similarity=0.069 Sum_probs=166.1
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCcEEEEecccccC-----------eeeEEECCCCCE----EEEEeCCCcEEEEeCCCC
Q psy226 118 FSLMASCSE-DATIRLWDY-ETGEYERALHGHLDS-----------VQDIAFDQSGKL----LVSCSADMSLKLWDMSTY 180 (406)
Q Consensus 118 ~~~latgs~-dg~v~vwd~-~~~~~~~~~~~h~~~-----------V~~l~~~~~g~~----l~sgs~d~~i~vwd~~~~ 180 (406)
+..|+.++. ++.|.-+|. .+|+.+-........ ...++++|.+.. ++.++.|+.+.-+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456666777 899999999 899987665432210 123555433334 888899999999999999
Q ss_pred eEEEEEecCCc----ceEE-EEEecCCCEEEEEe------CCCcEEEEEcCCCeEEEEeecCCccE--------------
Q psy226 181 QCLKTMQGHDH----NVTG-VAFLPNSDFVLSAS------RDKTIKMWEVATGYCVKTLTGHREWV-------------- 235 (406)
Q Consensus 181 ~~~~~~~~h~~----~v~~-~~~~p~~~~l~s~s------~d~~i~iwd~~~~~~~~~~~~~~~~v-------------- 235 (406)
+.+........ .+.+ ... .+ ..+++++ .++.|+-+|..+|+.+..+.......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VK-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ET-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEE-EC-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 98766543221 1221 111 13 4555555 38999999999999887765332110
Q ss_pred ------------------------EEEEECCCCCEEEEEeCC----------------CeEEEEeCCCccceeEEecCCc
Q psy226 236 ------------------------RQIKVSPDGTLLASCSND----------------HTARVWSLATKETKAELRGHDH 275 (406)
Q Consensus 236 ------------------------~~l~~~~~~~~l~s~~~d----------------~~v~vwd~~~~~~~~~~~~~~~ 275 (406)
..++++++..+++.++.+ +.|..+|..+++.+-.++...+
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 134566777777777655 3788899988877655443211
Q ss_pred eEEEEEeCCCCC-ccccccccCCCCCCCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCCC-------------cCE-
Q psy226 276 TVECVAWAPGVA-SESISEAAGRPPGQGGG---PYLATGSRDKTIKLWDVGSGSLLFTLIGHD-------------NWV- 337 (406)
Q Consensus 276 ~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~-------------~~v- 337 (406)
.. |.-+.. ...+.... ..+| ..++.++.+|.+.++|..+|+.+....-.. .++
T Consensus 300 d~----wd~d~~~~p~l~d~~-----~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~ 370 (599)
T 1w6s_A 300 DE----WDYAGVNVMMLSEQK-----DKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVR 370 (599)
T ss_dssp CS----SCCCCCCCCEEEEEE-----CTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEE
T ss_pred cc----ccccCCCccEEEecc-----ccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceee
Confidence 00 000000 00000000 0124 467788999999999999999887654211 011
Q ss_pred -------------------------EEEEEcCCCCEEEEEe---------------------------------------
Q psy226 338 -------------------------RGVTFHPGGKYLVSCG--------------------------------------- 353 (406)
Q Consensus 338 -------------------------~~l~~s~~g~~l~sgs--------------------------------------- 353 (406)
..++++|+...+++..
T Consensus 371 ~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~ 450 (599)
T 1w6s_A 371 DPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYE 450 (599)
T ss_dssp CGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTB
T ss_pred ccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCC
Confidence 1356777766655431
Q ss_pred CCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 354 DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 354 ~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
.+|.|..||..+++.+-+.... ..+..-.....+.++..|+.||.++.||.+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~ 502 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSD 502 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECC
Confidence 3478888998888765444211 111111122345677779999999999853
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.96 E-value=6.2e-07 Score=87.81 Aligned_cols=274 Identities=16% Similarity=0.100 Sum_probs=166.5
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCcEEEEeccccc-C---------e-eeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEE
Q psy226 118 FSLMASCSE-DATIRLWDY-ETGEYERALHGHLD-S---------V-QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184 (406)
Q Consensus 118 ~~~latgs~-dg~v~vwd~-~~~~~~~~~~~h~~-~---------V-~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~ 184 (406)
+..++.++. ++.|.-+|. .+|+.+-....... . + ..+++ .+..++.++.|+.+..+|..+++.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 456666676 899999999 89998766542211 0 0 12233 35678888899999999999998876
Q ss_pred EEecCCc----ceEE-EEEecCCCEEEEEeC------CCcEEEEEcCCCeEEEEeecCCcc-------------------
Q psy226 185 TMQGHDH----NVTG-VAFLPNSDFVLSASR------DKTIKMWEVATGYCVKTLTGHREW------------------- 234 (406)
Q Consensus 185 ~~~~h~~----~v~~-~~~~p~~~~l~s~s~------d~~i~iwd~~~~~~~~~~~~~~~~------------------- 234 (406)
....... .+.+ ... .+..++.++. ++.|..+|..+|+.+..+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 6543221 1211 111 2345666654 799999999999988776532211
Q ss_pred -------------------EEEEEECCCCCEEEEEeCC----------------CeEEEEeCCCccceeEEecCCceEEE
Q psy226 235 -------------------VRQIKVSPDGTLLASCSND----------------HTARVWSLATKETKAELRGHDHTVEC 279 (406)
Q Consensus 235 -------------------v~~l~~~~~~~~l~s~~~d----------------~~v~vwd~~~~~~~~~~~~~~~~v~~ 279 (406)
...++++++...+..++.+ +.|..+|..+++.+-.++...+..
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~-- 295 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDE-- 295 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCS--
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcc--
Confidence 0135566766666665532 358889988887665443211000
Q ss_pred EEeCCCC-CccccccccCCCCCCCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCCC--c-----------CE-----
Q psy226 280 VAWAPGV-ASESISEAAGRPPGQGGG---PYLATGSRDKTIKLWDVGSGSLLFTLIGHD--N-----------WV----- 337 (406)
Q Consensus 280 ~~~~~~~-~~~~~~~~~~~~~~~~~~---~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~--~-----------~v----- 337 (406)
|.-+. ....+.. ...+| ..++.++.+|.+.++|..+|+.+..+.-.. . ++
T Consensus 296 --~d~~~~~~p~l~~------~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~ 367 (571)
T 2ad6_A 296 --WDFAGVNQMVLTD------QPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEF 367 (571)
T ss_dssp --SCCCCCCCCEEEE------EEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGG
T ss_pred --cccccCCCCEEEe------cccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceeccccc
Confidence 00000 0000000 00023 357778899999999999999887654211 1 11
Q ss_pred ---------------------EEEEEcCCCCEEEEEe-------------------------------------CCCeEE
Q psy226 338 ---------------------RGVTFHPGGKYLVSCG-------------------------------------DDKTLR 359 (406)
Q Consensus 338 ---------------------~~l~~s~~g~~l~sgs-------------------------------------~d~~i~ 359 (406)
..++++|+...|+..+ .+|.|.
T Consensus 368 ~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~ 447 (571)
T 2ad6_A 368 ATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIR 447 (571)
T ss_dssp CCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEE
T ss_pred CCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEE
Confidence 2357888877776653 357899
Q ss_pred EEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 360 vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
.||..+++.+-++... ..+....+...+..+..++.||.|..||.+
T Consensus 448 a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 448 AFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp EECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred EEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECC
Confidence 9999998876555422 122222233345677779999999999863
No 251
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.95 E-value=1.1e-06 Score=79.65 Aligned_cols=232 Identities=10% Similarity=0.092 Sum_probs=145.0
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEec--------------------CCcceEEEEEecCCCEEEEE
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG--------------------HDHNVTGVAFLPNSDFVLSA 208 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~--------------------h~~~v~~~~~~p~~~~l~s~ 208 (406)
....+++++++|+++.++..++.|..||..+++.. .+.. ......++++.+++..|+.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~ 97 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIV 97 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEE
Confidence 45678999999987888888999999998765432 2221 01247889999843455555
Q ss_pred eCCCcEEEEEcCCCeEEEEeec-----CCccEEEEEECC-CCCEEEEEeC-----------------CCeEEEEeCCCcc
Q psy226 209 SRDKTIKMWEVATGYCVKTLTG-----HREWVRQIKVSP-DGTLLASCSN-----------------DHTARVWSLATKE 265 (406)
Q Consensus 209 s~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~~-~~~~l~s~~~-----------------d~~v~vwd~~~~~ 265 (406)
...+.|..+|..++.. ..+.. .......+++++ +|++.++-.. ++.|..+|..++.
T Consensus 98 d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp ETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred ECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 5556688888765532 22211 113467899999 9987776532 3678888876544
Q ss_pred ceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEE-eCCCcEEEEECCCC---eEEEEEeCCCcCEEEEE
Q psy226 266 TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATG-SRDKTIKLWDVGSG---SLLFTLIGHDNWVRGVT 341 (406)
Q Consensus 266 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~lwd~~~~---~~~~~~~~h~~~v~~l~ 341 (406)
....... ......++++| ++.+|+.+ +..+.|..|++... .. ..+..... ...++
T Consensus 177 ~~~~~~~-~~~p~gia~~~------------------dg~~lyv~d~~~~~I~~~~~~~~~~~~~-~~~~~~~g-P~gi~ 235 (322)
T 2fp8_A 177 TTLLLKE-LHVPGGAEVSA------------------DSSFVLVAEFLSHQIVKYWLEGPKKGTA-EVLVKIPN-PGNIK 235 (322)
T ss_dssp EEEEEEE-ESCCCEEEECT------------------TSSEEEEEEGGGTEEEEEESSSTTTTCE-EEEEECSS-EEEEE
T ss_pred EEEeccC-CccCcceEECC------------------CCCEEEEEeCCCCeEEEEECCCCcCCcc-ceEEeCCC-CCCeE
Confidence 3221111 11223456655 35545444 55688999998642 21 11111223 78899
Q ss_pred EcCCCCEEEEEeC----------CCeEEEEeCCCCccceeeccc----cceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 342 FHPGGKYLVSCGD----------DKTLRVWDTANKRNMKTLEAH----SHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 342 ~s~~g~~l~sgs~----------d~~i~vwd~~~~~~~~~l~~h----~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
++++|++.++... .+.|..+|.. ++.+..+... -..++++++ .++.+.++....+.|..+++
T Consensus 236 ~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 236 RNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp ECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC
T ss_pred ECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEec
Confidence 9999987776654 4678888864 6666655432 234666766 36666677667888888875
No 252
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.94 E-value=4.5e-07 Score=78.12 Aligned_cols=180 Identities=12% Similarity=0.144 Sum_probs=123.2
Q ss_pred eeeEEECCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEE-eCCCcEEEEEcCCCeEEEE
Q psy226 151 VQDIAFDQSGKLLVSCSADM--SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA-SRDKTIKMWEVATGYCVKT 227 (406)
Q Consensus 151 V~~l~~~~~g~~l~sgs~d~--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~i~iwd~~~~~~~~~ 227 (406)
...|.|+ ++.+..+.+.+| .|+++|+.+++.+..+.... .....-..++++.|... -.++.+.++|..+.+.+.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 5788998 666667777766 89999999999988876543 33333233345555544 4588999999999999988
Q ss_pred eecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecC--Cce---EEEEEeCCCCCccccccccCCCCCCC
Q psy226 228 LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH--DHT---VECVAWAPGVASESISEAAGRPPGQG 302 (406)
Q Consensus 228 ~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~--~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (406)
+.-... ...+++++..|+....++.|.++|..+.+....+... ..+ +..+.|.
T Consensus 123 i~~~~e---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~------------------- 180 (262)
T 3nol_A 123 FNYDGE---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV------------------- 180 (262)
T ss_dssp EECSSC---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-------------------
T ss_pred EECCCC---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-------------------
Confidence 874332 1233356776666666888999999887766554431 112 2223332
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeEEEEEeCC------------CcCEEEEEEcCCCCEEEEEeC
Q psy226 303 GGPYLATGSRDKTIKLWDVGSGSLLFTLIGH------------DNWVRGVTFHPGGKYLVSCGD 354 (406)
Q Consensus 303 ~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h------------~~~v~~l~~s~~g~~l~sgs~ 354 (406)
+|...+..-.++.|.+.|..+|+.+..+.-. .+-.+.|+|+|+++.|+..+.
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 2445555556889999999999998876532 134689999999888777764
No 253
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.93 E-value=3.1e-06 Score=77.51 Aligned_cols=247 Identities=11% Similarity=0.007 Sum_probs=151.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEE
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSC-SADMSLKLWDMSTYQCLK 184 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sg-s~d~~i~vwd~~~~~~~~ 184 (406)
.+..+|.+..++..++++ ....|+..+.........+.+ ...+..++|++.+..|+.. ...+.|..+++.......
T Consensus 33 ~d~~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 33 PDRRSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp TTSSCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CCCCcccccccCceeEee--cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 344567777774434433 335688888877766555543 3457899999766655544 456889999987654333
Q ss_pred EEecCCcceEEEEEecCCCEE-EEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCC-EEEEEeCC-CeEEEEeC
Q psy226 185 TMQGHDHNVTGVAFLPNSDFV-LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSND-HTARVWSL 261 (406)
Q Consensus 185 ~~~~h~~~v~~~~~~p~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d-~~v~vwd~ 261 (406)
.+........++++.+.+..| ++-...+.|.+.++........+...-.....++++|.+. ++++-... +.|..+++
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 333223445789998865554 4555567899999865443333334445678899998555 44554455 78888887
Q ss_pred CCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEE
Q psy226 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341 (406)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~ 341 (406)
..................+++.|. .+.+.++-+..+.|..+|+........+........+++
T Consensus 190 dG~~~~~~~~~~~~~PnGla~d~~-----------------~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gia 252 (349)
T 3v64_C 190 DGSGRRIIADTHLFWPNGLTIDYA-----------------GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAIT 252 (349)
T ss_dssp TSCSCEESCCSSCSCEEEEEEETT-----------------TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEE
T ss_pred CCCCcEEEEECCCCCcceEEEeCC-----------------CCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEE
Confidence 654332222222334567777763 244445555567899999864332222333345677888
Q ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCccceeec
Q psy226 342 FHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373 (406)
Q Consensus 342 ~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~ 373 (406)
+. .+..+++-...+.|..+|..+++....+.
T Consensus 253 v~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 253 VF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 83 45555666677889999876776665554
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.92 E-value=3.4e-07 Score=89.64 Aligned_cols=267 Identities=12% Similarity=0.071 Sum_probs=155.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEecc--ccc--Ceee-EEECCCCCEEEEEeC------CCcEEEEeCCCCeEEEEE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHG--HLD--SVQD-IAFDQSGKLLVSCSA------DMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~--h~~--~V~~-l~~~~~g~~l~sgs~------d~~i~vwd~~~~~~~~~~ 186 (406)
+..++.++.|+.|..+|..+|+....... +.. .+.+ .... + ..++.++. ++.|..+|..+++.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 45778888899999999999988765442 111 2221 1111 3 45555554 789999999999988766
Q ss_pred ecCCcc-------------------------------------e-EEEEEecCCCEEEEEeCC----------------C
Q psy226 187 QGHDHN-------------------------------------V-TGVAFLPNSDFVLSASRD----------------K 212 (406)
Q Consensus 187 ~~h~~~-------------------------------------v-~~~~~~p~~~~l~s~s~d----------------~ 212 (406)
...... + ..+++.+....++.++.+ +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 532211 0 135677777777766532 3
Q ss_pred cEEEEEcCCCeEEEEeec--CC--------ccEEEEEECCCCC---EEEEEeCCCeEEEEeCCCccceeEEecCC-----
Q psy226 213 TIKMWEVATGYCVKTLTG--HR--------EWVRQIKVSPDGT---LLASCSNDHTARVWSLATKETKAELRGHD----- 274 (406)
Q Consensus 213 ~i~iwd~~~~~~~~~~~~--~~--------~~v~~l~~~~~~~---~l~s~~~d~~v~vwd~~~~~~~~~~~~~~----- 274 (406)
.|..+|..+|+.+..++. |. .++. +...++|+ .++.++.+|.+.++|..+++.+.......
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 599999999998877653 21 1121 22224674 57788899999999999887765543221
Q ss_pred --------ceEE-----------EEEeCCCCCccccccccCCCCCCCCCCEEEEE-------------------------
Q psy226 275 --------HTVE-----------CVAWAPGVASESISEAAGRPPGQGGGPYLATG------------------------- 310 (406)
Q Consensus 275 --------~~v~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~------------------------- 310 (406)
.++. .....|....... ......++....+++.
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~---w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~ 428 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHN---QGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGAT 428 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSC---SCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccC---CCCceECCCCCEEEEEchhccccccccccccccCCcccccc
Confidence 1111 0001111000000 0000000011222222
Q ss_pred ------------eCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccce
Q psy226 311 ------------SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378 (406)
Q Consensus 311 ------------~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~ 378 (406)
..++.|..||+.+++.+-++.... .+.+..+...+..++.++.|+.|+.||..+++.+-++......
T Consensus 429 ~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~ 507 (571)
T 2ad6_A 429 LAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGG 507 (571)
T ss_dssp EEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC
T ss_pred ceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCc
Confidence 135789999999999887765322 1222222234667788999999999999999988777543221
Q ss_pred -EEEEEEeCCCCEE
Q psy226 379 -VTSLDFHRAHPYV 391 (406)
Q Consensus 379 -v~~l~~~~~~~~l 391 (406)
-.-+.+..+++.+
T Consensus 508 ~~~p~~~~~~G~~y 521 (571)
T 2ad6_A 508 IGSPMTYSFKGKQY 521 (571)
T ss_dssp CSCCEEEEETTEEE
T ss_pred EeeeEEEEECCEEE
Confidence 1123355666543
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.90 E-value=3.3e-06 Score=75.80 Aligned_cols=223 Identities=11% Similarity=0.042 Sum_probs=133.4
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCC--cEEEEEcCCCeEEE
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK--TIKMWEVATGYCVK 226 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~--~i~iwd~~~~~~~~ 226 (406)
....+++|+++|+++++-..++.|..||..+. ....+. ......++++.++++++++..... .|..+|..++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 34668999999987777667889999998753 333332 234688999999999666544332 46667777776543
Q ss_pred Eee-cCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc-eeEEec---------CCceEEEEEeCCCCCcccccccc
Q psy226 227 TLT-GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET-KAELRG---------HDHTVECVAWAPGVASESISEAA 295 (406)
Q Consensus 227 ~~~-~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~-~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~ 295 (406)
... ........++..+++..+++-..++.|.++|..+... +..... .......+ +|
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~----------- 176 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR----------- 176 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE-----------
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc-----------
Confidence 322 1223345566666665556555688888888764321 110000 00001111 11
Q ss_pred CCCCCCCCCC-EEEEEeCCCcEEEEECCC-CeE--EEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc--c
Q psy226 296 GRPPGQGGGP-YLATGSRDKTIKLWDVGS-GSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN--M 369 (406)
Q Consensus 296 ~~~~~~~~~~-~l~s~~~d~~i~lwd~~~-~~~--~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~--~ 369 (406)
++. +.++-...+.|..||+.. +.. ...+.. ......++++++|++.++....+.|.++|.. ++. +
T Consensus 177 -------dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 177 -------FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTII 247 (306)
T ss_dssp -------ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEE
T ss_pred -------CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEE
Confidence 233 445555677899999864 321 111111 1235678999999988877778899999975 544 2
Q ss_pred eeeccccceEEEEEEe---CCCCEEEEee
Q psy226 370 KTLEAHSHFVTSLDFH---RAHPYVVTGS 395 (406)
Q Consensus 370 ~~l~~h~~~v~~l~~~---~~~~~l~sgs 395 (406)
..+.......++++|. |++..|...+
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred eecccccCCceEEEEecccCCCCEEEEEC
Confidence 2333333458899998 8877665544
No 256
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.89 E-value=8.8e-08 Score=95.72 Aligned_cols=269 Identities=11% Similarity=0.030 Sum_probs=150.8
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEEcCCCcEEE--Eec-ccccCeeeEEECCCCCEEEEEeC-CCcEEE
Q psy226 111 KVIFHP-VFSLMASCSEDA-----------TIRLWDYETGEYER--ALH-GHLDSVQDIAFDQSGKLLVSCSA-DMSLKL 174 (406)
Q Consensus 111 ~v~~~p-~~~~latgs~dg-----------~v~vwd~~~~~~~~--~~~-~h~~~V~~l~~~~~g~~l~sgs~-d~~i~v 174 (406)
.+++.| ++.+++.|+.++ .+.+||..+++... .+. .+.....++++..+|++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456667 888999887653 58899998876432 222 22333445778889999999884 468999
Q ss_pred EeCCCCeEEEEEecCCc-ceEEEEEecCCCEEEEEe-CC-----CcEEEEEcCCCeEEEEe----ecCCccEEEEEECCC
Q psy226 175 WDMSTYQCLKTMQGHDH-NVTGVAFLPNSDFVLSAS-RD-----KTIKMWEVATGYCVKTL----TGHREWVRQIKVSPD 243 (406)
Q Consensus 175 wd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s-~d-----~~i~iwd~~~~~~~~~~----~~~~~~v~~l~~~~~ 243 (406)
||..+.+....-..+.. .-.+++..++++.++.|+ .+ ..+.+||..+..-...- ......-....+..+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 99887654322111111 123456667899888888 44 56899999876543320 000000000112345
Q ss_pred CCEEEEEeCCC---------eEEEEeCCCccceeEEecCCc---------eEEEEEeCCCCCccccccccCCCCCCCCCC
Q psy226 244 GTLLASCSNDH---------TARVWSLATKETKAELRGHDH---------TVECVAWAPGVASESISEAAGRPPGQGGGP 305 (406)
Q Consensus 244 ~~~l~s~~~d~---------~v~vwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
+..++.|+.+| .+..||..+..-......+.. .-.++.+.. .++.
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~-----------------~~~~ 412 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDA-----------------VKGK 412 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEET-----------------TTTE
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccC-----------------CCCe
Confidence 55556665554 456777765432221111100 001111110 1456
Q ss_pred EEEEEeCCC-----------cEEEEECCCCeEEEEE--eCCCcC-EEEEEEcCCCCEEEEEeCC-----------CeEEE
Q psy226 306 YLATGSRDK-----------TIKLWDVGSGSLLFTL--IGHDNW-VRGVTFHPGGKYLVSCGDD-----------KTLRV 360 (406)
Q Consensus 306 ~l~s~~~d~-----------~i~lwd~~~~~~~~~~--~~h~~~-v~~l~~s~~g~~l~sgs~d-----------~~i~v 360 (406)
+++.|+.++ .|.+||..+..-.... .-+... -.+.+..|+|+.++.|+.+ ..+.+
T Consensus 413 i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ 492 (656)
T 1k3i_A 413 ILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEI 492 (656)
T ss_dssp EEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEE
T ss_pred EEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEE
Confidence 777777532 6778888776543322 112222 2344566899999998854 46889
Q ss_pred EeCCCCcc--ceeeccccceEEEEEEeCCCCEEEEeeC
Q psy226 361 WDTANKRN--MKTLEAHSHFVTSLDFHRAHPYVVTGSV 396 (406)
Q Consensus 361 wd~~~~~~--~~~l~~h~~~v~~l~~~~~~~~l~sgs~ 396 (406)
||..+.+- +..+......-.+..+.|++++++.||.
T Consensus 493 ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 493 YVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 99876542 2212111111123446789999999985
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.88 E-value=4.9e-06 Score=81.57 Aligned_cols=277 Identities=13% Similarity=0.097 Sum_probs=162.9
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEecccccC---------eeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEec
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGHLDS---------VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG 188 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~---------V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~ 188 (406)
+..++.++.++.|.-+|..+|+.+-.+...... -..+++ .+..++.++.|+.+.-+|..+++.+.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 345555555445999999999987666533221 012233 356788889999999999999998776654
Q ss_pred CCc----ceE-EEEEecC---CC-EEEEEe------CCCcEEEEEcCCCeEEEEeecCCccE------------------
Q psy226 189 HDH----NVT-GVAFLPN---SD-FVLSAS------RDKTIKMWEVATGYCVKTLTGHREWV------------------ 235 (406)
Q Consensus 189 h~~----~v~-~~~~~p~---~~-~l~s~s------~d~~i~iwd~~~~~~~~~~~~~~~~v------------------ 235 (406)
... .+. +.....+ ++ .+++++ .++.|.-+|..+|+.+.........+
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 321 111 1111111 22 566655 37899999999998776543210000
Q ss_pred -----------------------EEEEECCCCCEEEEEeC--------------------C----CeEEEEeCCCcccee
Q psy226 236 -----------------------RQIKVSPDGTLLASCSN--------------------D----HTARVWSLATKETKA 268 (406)
Q Consensus 236 -----------------------~~l~~~~~~~~l~s~~~--------------------d----~~v~vwd~~~~~~~~ 268 (406)
..++++|+..+++.+.. | +.|..+|..+++.+-
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 13466677777766653 2 578999998887765
Q ss_pred EEecCCceEEEEEeCCCC-CccccccccCCCCCCCCC---CEEEEEeCCCcEEEEECCCCeEEEEEeCCC--cCE-----
Q psy226 269 ELRGHDHTVECVAWAPGV-ASESISEAAGRPPGQGGG---PYLATGSRDKTIKLWDVGSGSLLFTLIGHD--NWV----- 337 (406)
Q Consensus 269 ~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~--~~v----- 337 (406)
.++...+.. |.-+. ....+.... ..+| ..++.++.+|.++++|..+|+.+..+.... ++.
T Consensus 306 ~~q~~~~d~----wd~~~~~~p~l~~~~-----~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~ 376 (582)
T 1flg_A 306 FYQHTPNDA----WDFSGNNELVLFDYK-----AKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDL 376 (582)
T ss_dssp EEESSTTCC----SCCCCCCCCEEEEEE-----CSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECT
T ss_pred EEeCCCCCc----ccccCCCCcEEEeee-----cCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccc
Confidence 543211100 00000 000000000 0123 378889999999999999999887654331 111
Q ss_pred --------------------------------------EEEEEcCCCCEEEEEe--------------------------
Q psy226 338 --------------------------------------RGVTFHPGGKYLVSCG-------------------------- 353 (406)
Q Consensus 338 --------------------------------------~~l~~s~~g~~l~sgs-------------------------- 353 (406)
..++++|+...+++..
T Consensus 377 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 456 (582)
T 1flg_A 377 KTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFR 456 (582)
T ss_dssp TTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceecccee
Confidence 1346666655554432
Q ss_pred -------CCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeecC
Q psy226 354 -------DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406 (406)
Q Consensus 354 -------~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~~ 406 (406)
.+|.|..||..+++.+-+..... .+..-.....+.+++.|+.||.++.||.+
T Consensus 457 ~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~ 515 (582)
T 1flg_A 457 IKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAK 515 (582)
T ss_dssp EEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETT
T ss_pred ecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECC
Confidence 36889999999988764443221 11111122246678889999999999863
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.87 E-value=1.5e-06 Score=85.27 Aligned_cols=275 Identities=12% Similarity=0.095 Sum_probs=158.9
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeccccc----Ceee--EEECC--CCC-EEEEEeC------CCcEEEEeCCCCeE
Q psy226 118 FSLMASCSEDATIRLWDYETGEYERALHGHLD----SVQD--IAFDQ--SGK-LLVSCSA------DMSLKLWDMSTYQC 182 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~----~V~~--l~~~~--~g~-~l~sgs~------d~~i~vwd~~~~~~ 182 (406)
+..++.++.|+.|.-+|..+|+..-....... .+.+ +.... +|+ .+++++. ++.|.-+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 45678888999999999999998765543210 1111 11111 233 5666553 78999999999988
Q ss_pred EEEEecCCcce-----------------------------------------EEEEEecCCCEEEEEeC-----------
Q psy226 183 LKTMQGHDHNV-----------------------------------------TGVAFLPNSDFVLSASR----------- 210 (406)
Q Consensus 183 ~~~~~~h~~~v-----------------------------------------~~~~~~p~~~~l~s~s~----------- 210 (406)
+.........+ ..+++.|..++++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 76543211000 13566777777776653
Q ss_pred ---------C----CcEEEEEcCCCeEEEEeec--CCc--------cEEEEEEC-CCCC---EEEEEeCCCeEEEEeCCC
Q psy226 211 ---------D----KTIKMWEVATGYCVKTLTG--HRE--------WVRQIKVS-PDGT---LLASCSNDHTARVWSLAT 263 (406)
Q Consensus 211 ---------d----~~i~iwd~~~~~~~~~~~~--~~~--------~v~~l~~~-~~~~---~l~s~~~d~~v~vwd~~~ 263 (406)
| +.|..+|..+|+.+..++. |.. ++. +... .+|+ .++.++.+|.++++|..+
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 5899999999998887753 321 121 1221 4674 788899999999999999
Q ss_pred ccceeEEecCCc--eEEEEE-----------eCCCCC---ccccccccCCCC-----------CCCCCCEEEEE------
Q psy226 264 KETKAELRGHDH--TVECVA-----------WAPGVA---SESISEAAGRPP-----------GQGGGPYLATG------ 310 (406)
Q Consensus 264 ~~~~~~~~~~~~--~v~~~~-----------~~~~~~---~~~~~~~~~~~~-----------~~~~~~~l~s~------ 310 (406)
++.+-....... ....+. +.|... ..........|. .++....+++.
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 887765543320 011110 111000 000000000000 00011112221
Q ss_pred ---------------------------eCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy226 311 ---------------------------SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363 (406)
Q Consensus 311 ---------------------------~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~ 363 (406)
..+|.|.-||+.+|+.+-....... +..-.....+..++.|+.|+.++.||.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP-LWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC-CCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC-CcccceEeCCCEEEEECCCCcEEEEEC
Confidence 1367899999999998876653321 111111124667888999999999999
Q ss_pred CCCccceeeccccceE-EEEEEeCCCC-EEEEe
Q psy226 364 ANKRNMKTLEAHSHFV-TSLDFHRAHP-YVVTG 394 (406)
Q Consensus 364 ~~~~~~~~l~~h~~~v-~~l~~~~~~~-~l~sg 394 (406)
.+++.+-+++.....+ .-+.|..+|+ |+++.
T Consensus 515 ~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 515 KSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 9999887776543321 2255666775 55543
No 259
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=1.7e-06 Score=74.60 Aligned_cols=190 Identities=11% Similarity=0.155 Sum_probs=127.1
Q ss_pred eEEEEEecCCcc--eEEEEEecCCCEEEEEeCCC--cEEEEEcCCCeEEEEeecCCcc-EEEEEECCCCCEEE-EEeCCC
Q psy226 181 QCLKTMQGHDHN--VTGVAFLPNSDFVLSASRDK--TIKMWEVATGYCVKTLTGHREW-VRQIKVSPDGTLLA-SCSNDH 254 (406)
Q Consensus 181 ~~~~~~~~h~~~--v~~~~~~p~~~~l~s~s~d~--~i~iwd~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~-s~~~d~ 254 (406)
+.++++ .|... ..++.|+ ++.+..+.+.+| .|+.+|+.+++.+..+...... -..+++ ++..+. ..-.++
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSS
T ss_pred EEEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCC
Confidence 345555 35433 4788998 666666777766 8999999999988887654332 233444 344444 444689
Q ss_pred eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC-
Q psy226 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH- 333 (406)
Q Consensus 255 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h- 333 (406)
.+.++|..+.+.+..+...... ..+++ ++..|+.+..++.|.++|..+.+.+.++.-.
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~eG-~glt~--------------------dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~ 166 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDGEG-WGLTH--------------------NDQYLIMSDGTPVLRFLDPESLTPVRTITVTA 166 (262)
T ss_dssp EEEEEETTTCCEEEEEECSSCC-CCEEE--------------------CSSCEEECCSSSEEEEECTTTCSEEEEEECEE
T ss_pred EEEEEECccCcEEEEEECCCCc-eEEec--------------------CCCEEEEECCCCeEEEEcCCCCeEEEEEEecc
Confidence 9999999998877766532211 11111 2344555555788999999999888776432
Q ss_pred -C---cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc------------cceEEEEEEeCCCCEEEEeeC
Q psy226 334 -D---NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH------------SHFVTSLDFHRAHPYVVTGSV 396 (406)
Q Consensus 334 -~---~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h------------~~~v~~l~~~~~~~~l~sgs~ 396 (406)
. ..++.+.|. +|+..+..-.+..|.+.|..+++.+..+... ....+.+||+|+++.|...+.
T Consensus 167 ~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 167 HGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 1 335567776 6766665657889999999999988777531 235789999998876655543
No 260
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.87 E-value=3.7e-06 Score=78.20 Aligned_cols=255 Identities=11% Similarity=0.019 Sum_probs=154.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEe
Q psy226 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV-SCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~-sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
-+|.+..+. .+|+.+ ....|+..++.++.....+.+ ...+..++|++.+..|+ +-...+.|..+++........+.
T Consensus 79 ~~C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 79 RSCKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEECSSC-CEEEEE-CBSCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CeECCcccc-ceeEee-cCccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 446666663 333333 346788889887766555543 34578999997665555 44466889999987654333333
Q ss_pred cCCcceEEEEEecCCCEE-EEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE-EEEeCC-CeEEEEeCCCc
Q psy226 188 GHDHNVTGVAFLPNSDFV-LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL-ASCSND-HTARVWSLATK 264 (406)
Q Consensus 188 ~h~~~v~~~~~~p~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~d-~~v~vwd~~~~ 264 (406)
.......++++.+.+..| ++-...+.|.+.++........+.........++++|.+..| ++-... +.|..+++...
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~ 235 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 235 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC
Confidence 223345678898865555 444556788888876544333344444567899999866554 444444 78888888654
Q ss_pred cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcC
Q psy226 265 ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344 (406)
Q Consensus 265 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~ 344 (406)
...............++++|. .+.+.++-+..+.|..+|+........+........++++ .
T Consensus 236 ~~~~~~~~~~~~PnGlavd~~-----------------~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~ 297 (386)
T 3v65_B 236 GRRIIADTHLFWPNGLTIDYA-----------------GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-F 297 (386)
T ss_dssp SCEEEECSSCSCEEEEEEEGG-----------------GTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-E
T ss_pred CcEEEEECCCCCeeeEEEeCC-----------------CCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-E
Confidence 333333223334567777753 2344455556678999988643332233333445778888 3
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEE
Q psy226 345 GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384 (406)
Q Consensus 345 ~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 384 (406)
.+..+++-...+.|..+|..+++.+..+.........|++
T Consensus 298 ~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 298 EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 4555666667889999997777766666433223334443
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.86 E-value=7.5e-07 Score=87.31 Aligned_cols=270 Identities=14% Similarity=0.084 Sum_probs=155.8
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEecccc----cCeee-EEECCCCCEEEEEe------CCCcEEEEeCCCCeEEEEEecC
Q psy226 121 MASCSEDATIRLWDYETGEYERALHGHL----DSVQD-IAFDQSGKLLVSCS------ADMSLKLWDMSTYQCLKTMQGH 189 (406)
Q Consensus 121 latgs~dg~v~vwd~~~~~~~~~~~~h~----~~V~~-l~~~~~g~~l~sgs------~d~~i~vwd~~~~~~~~~~~~h 189 (406)
|+.++.|+.|.-+|..+|+..-...... ..+.+ -.+. ++ .++.++ .++.|.-+|..+++.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 8888899999999999999876543211 02221 1111 34 455554 3899999999999987766532
Q ss_pred Ccc-------------------------------------e-EEEEEecCCCEEEEEeCC----------------CcEE
Q psy226 190 DHN-------------------------------------V-TGVAFLPNSDFVLSASRD----------------KTIK 215 (406)
Q Consensus 190 ~~~-------------------------------------v-~~~~~~p~~~~l~s~s~d----------------~~i~ 215 (406)
... + ..+++.+..++++.++.+ ++|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 211 0 135667777888877665 3799
Q ss_pred EEEcCCCeEEEEeecCC--c--------cEEEEEEC-CCC---CEEEEEeCCCeEEEEeCCCccceeEEecCC-------
Q psy226 216 MWEVATGYCVKTLTGHR--E--------WVRQIKVS-PDG---TLLASCSNDHTARVWSLATKETKAELRGHD------- 274 (406)
Q Consensus 216 iwd~~~~~~~~~~~~~~--~--------~v~~l~~~-~~~---~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~------- 274 (406)
.+|..+|+.+..++... . ++. +... .+| ..++.++.+|.+.++|..+++.+-......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 99999999887765422 1 121 2222 567 467788999999999999888765443211
Q ss_pred ------ceEE--------------------------EEEeCCCCCcccccc------c-cCCCCCCCCCCEE------EE
Q psy226 275 ------HTVE--------------------------CVAWAPGVASESISE------A-AGRPPGQGGGPYL------AT 309 (406)
Q Consensus 275 ------~~v~--------------------------~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~l------~s 309 (406)
.++. .++++|......+.. . ...........++ ..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 1111 111111110000000 0 0000000011111 11
Q ss_pred --Ee------CCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceE-E
Q psy226 310 --GS------RDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV-T 380 (406)
Q Consensus 310 --~~------~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v-~ 380 (406)
.+ .+|.|.-||+.+++.+-........... .+...+..|+.++.|+.++.||..+++.+-+++.....+ .
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g-~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGG-TMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSB-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCc-ceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 01 4578999999999988766421111111 112246778889999999999999999887765432211 2
Q ss_pred EEEEeCCCC-EEEEe
Q psy226 381 SLDFHRAHP-YVVTG 394 (406)
Q Consensus 381 ~l~~~~~~~-~l~sg 394 (406)
-+.+..+|+ |+++.
T Consensus 520 P~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 520 PMTYTHKGTQYVAIY 534 (599)
T ss_dssp CEEEEETTEEEEEEE
T ss_pred cEEEEeCCEEEEEEE
Confidence 244556665 55543
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.85 E-value=3e-06 Score=72.36 Aligned_cols=180 Identities=16% Similarity=0.156 Sum_probs=120.9
Q ss_pred CeeeEEECCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEecCCcce-EEEEEecCCCEE-EEEeCCCcEEEEEcCCCeEE
Q psy226 150 SVQDIAFDQSGKLLVSCSADM--SLKLWDMSTYQCLKTMQGHDHNV-TGVAFLPNSDFV-LSASRDKTIKMWEVATGYCV 225 (406)
Q Consensus 150 ~V~~l~~~~~g~~l~sgs~d~--~i~vwd~~~~~~~~~~~~h~~~v-~~~~~~p~~~~l-~s~s~d~~i~iwd~~~~~~~ 225 (406)
-...|.|++ +.+..+.+.+| .|+.+|+.+++.+.......... .++++. ++.| ...-.++.+.++|..+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 466899986 55566666654 89999999999988776543322 234443 4444 44556899999999999999
Q ss_pred EEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCC--c---eEEEEEeCCCCCccccccccCCCCC
Q psy226 226 KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD--H---TVECVAWAPGVASESISEAAGRPPG 300 (406)
Q Consensus 226 ~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~--~---~v~~~~~~~~~~~~~~~~~~~~~~~ 300 (406)
.++...... ..++ +++..|+.+..++.|.++|..+.+....+.-.. . .+..+.|.
T Consensus 99 ~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~----------------- 158 (243)
T 3mbr_X 99 ARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV----------------- 158 (243)
T ss_dssp EEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-----------------
T ss_pred EEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-----------------
Confidence 888743322 2333 566666666678999999998877665554211 1 12223332
Q ss_pred CCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC-------------CcCEEEEEEcCCCCEEEEEeC
Q psy226 301 QGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH-------------DNWVRGVTFHPGGKYLVSCGD 354 (406)
Q Consensus 301 ~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h-------------~~~v~~l~~s~~g~~l~sgs~ 354 (406)
+|...+..-.++.|.+.|..+|+.+..+.-. .+-.+.|+++|+++.|+..+.
T Consensus 159 --~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 159 --NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp --TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred --CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 3444544446789999999999998876521 135689999998877766663
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=2.5e-05 Score=79.67 Aligned_cols=273 Identities=10% Similarity=0.012 Sum_probs=167.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec--------------ccccCeeeEEECCCCCEEEEEeCCCc
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--------------GHLDSVQDIAFDQSGKLLVSCSADMS 171 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~--------------~h~~~V~~l~~~~~g~~l~sgs~d~~ 171 (406)
...|.++...+++.+.+ |...+-|.++|..++.+..... .....|.++...++|.+ -.|+.++-
T Consensus 257 ~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~l-Wigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWI-ATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNI-WIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSEEEE-EESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCE-EEEEBSSC
T ss_pred CceEEEEEECCCCCEEE-EeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCE-EEEecCCe
Confidence 35688888888776544 5554668889988776433221 12356899999988874 45666667
Q ss_pred EEEEeCCCCeEEEEEe---------cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEe---ecCCccEEEEE
Q psy226 172 LKLWDMSTYQCLKTMQ---------GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL---TGHREWVRQIK 239 (406)
Q Consensus 172 i~vwd~~~~~~~~~~~---------~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~---~~~~~~v~~l~ 239 (406)
|..++..+........ .....|.++...+++. |..|+.++-|..||..++...... ......|.++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence 8888876543322110 0234688888877766 556666667888998765332111 12345788999
Q ss_pred ECCCCCEEEEEeCCCeEEEEeCCCccceeEEe--cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEE
Q psy226 240 VSPDGTLLASCSNDHTARVWSLATKETKAELR--GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIK 317 (406)
Q Consensus 240 ~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 317 (406)
..++|.+.+ |+.++.+..+|..++....... .....|.++...+ .+ .+..|+. +-|.
T Consensus 414 ~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~------------------~g-~lwigt~-~Gl~ 472 (781)
T 3v9f_A 414 KDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK------------------NK-KIWIGTH-AGVF 472 (781)
T ss_dssp ECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT------------------TS-EEEEEET-TEEE
T ss_pred ECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC------------------CC-CEEEEEC-CceE
Confidence 888887554 6777778889876553221111 1224455555443 23 3555565 5588
Q ss_pred EEECCCCeEEEEEeCC-----CcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc----ccceEEEEEEeCCC
Q psy226 318 LWDVGSGSLLFTLIGH-----DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA----HSHFVTSLDFHRAH 388 (406)
Q Consensus 318 lwd~~~~~~~~~~~~h-----~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~----h~~~v~~l~~~~~~ 388 (406)
.||..+++........ ...|.++...++|...+....+| |..||..+++. ..+.. ....|.++...+++
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g 550 (781)
T 3v9f_A 473 VIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKG 550 (781)
T ss_dssp EEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTS
T ss_pred EEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCC
Confidence 8998776543322222 46799999999998766544344 77788766542 22221 23568999999998
Q ss_pred CEEEEeeCCCeEEEeec
Q psy226 389 PYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 389 ~~l~sgs~Dg~v~iw~~ 405 (406)
.+.++.. +|.|..||.
T Consensus 551 ~lWi~T~-~Glv~~~d~ 566 (781)
T 3v9f_A 551 QMWLATG-EGLVCFPSA 566 (781)
T ss_dssp CEEEEET-TEEEEESCT
T ss_pred CEEEEEC-CCceEEECC
Confidence 8666543 666466653
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=3e-05 Score=79.01 Aligned_cols=271 Identities=12% Similarity=0.045 Sum_probs=165.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecc-------cccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHG-------HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~-------h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
..|.++...+++.+.+.. .+ -+.+||..++++...... ....|.++...++|.+. .|+..+-|.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLW-IATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEE-EEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEE-EEeCCCCeEEECCCC
Confidence 468889888888766654 34 588999887765432221 23569999998887655 455545588888876
Q ss_pred CeEEEEEe--------------cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEee---------cCCccEE
Q psy226 180 YQCLKTMQ--------------GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT---------GHREWVR 236 (406)
Q Consensus 180 ~~~~~~~~--------------~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---------~~~~~v~ 236 (406)
.+...... .....|.++...++|. |..|+.++-|..++..++....... .....|.
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 366 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS 366 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE
Confidence 54322111 1235688988887776 5567777778889876553222110 1235689
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEeCCCccceeEE---ecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC
Q psy226 237 QIKVSPDGTLLASCSNDHTARVWSLATKETKAEL---RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD 313 (406)
Q Consensus 237 ~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d 313 (406)
++..+++|. |..|+.++-|..+|..+....... ......|.++...+ .+. |..|+.+
T Consensus 367 ~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~------------------~g~-lWigt~~ 426 (781)
T 3v9f_A 367 SVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDS------------------EGN-LWFGTYL 426 (781)
T ss_dssp EEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECT------------------TSC-EEEEETT
T ss_pred EEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECC------------------CCC-EEEEecc
Confidence 999988887 455666677888887643221110 11223455554432 233 5557777
Q ss_pred CcEEEEECCCCeEEEEEe--CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc-----cceEEEEEEeC
Q psy226 314 KTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH-----SHFVTSLDFHR 386 (406)
Q Consensus 314 ~~i~lwd~~~~~~~~~~~--~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h-----~~~v~~l~~~~ 386 (406)
+-|..+|..+++...... .....|.++...++|...+. .. +-|.++|..+++........ ...|.++...+
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS 504 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcC
Confidence 778999987776433221 13467999999988876554 44 45888998765543222111 35799999999
Q ss_pred CCCEEEEeeCCCeEEEee
Q psy226 387 AHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 387 ~~~~l~sgs~Dg~v~iw~ 404 (406)
++.+.+....+| +..||
T Consensus 505 ~g~lWigt~~~G-l~~~~ 521 (781)
T 3v9f_A 505 EGRFWIGTFGGG-VGIYT 521 (781)
T ss_dssp TCCEEEEESSSC-EEEEC
T ss_pred CCCEEEEEcCCC-EEEEe
Confidence 988766443345 44454
No 265
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.79 E-value=9.7e-07 Score=76.07 Aligned_cols=169 Identities=14% Similarity=0.138 Sum_probs=120.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCe--eeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV--QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V--~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
...+.|+. +.+..+.+.+|.|+++|+.+++....+ -. ... ..+++..+ ++.+..-.++.+.++|..+++.+.++
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEE
Confidence 45788874 678888899999999999999987776 22 222 33555432 33444456889999999999999888
Q ss_pred ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecC--C---ccEEEEEECCCCCEEEEEeCCCeEEEEeC
Q psy226 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH--R---EWVRQIKVSPDGTLLASCSNDHTARVWSL 261 (406)
Q Consensus 187 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~--~---~~v~~l~~~~~~~~l~s~~~d~~v~vwd~ 261 (406)
.... .-.+++ ++++.|+.+..++.|.++|..+.+.+.++.-. . ..++.+.|. +|++++..-.+..|.+.|.
T Consensus 133 ~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 133 RYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp ECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred eCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 7432 223444 56788877777899999999999888776532 2 234667776 7776666667889999999
Q ss_pred CCccceeEEecC-------------CceEEEEEeCCC
Q psy226 262 ATKETKAELRGH-------------DHTVECVAWAPG 285 (406)
Q Consensus 262 ~~~~~~~~~~~~-------------~~~v~~~~~~~~ 285 (406)
.+++.+..+... ......++|.|.
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 998876655421 135577888774
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=8e-06 Score=69.74 Aligned_cols=190 Identities=14% Similarity=0.162 Sum_probs=125.4
Q ss_pred eEEEEEecCCc--ceEEEEEecCCCEEEEEeCC--CcEEEEEcCCCeEEEEeecCCc-cEEEEEECCCCCEEEEEeCCCe
Q psy226 181 QCLKTMQGHDH--NVTGVAFLPNSDFVLSASRD--KTIKMWEVATGYCVKTLTGHRE-WVRQIKVSPDGTLLASCSNDHT 255 (406)
Q Consensus 181 ~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s~d--~~i~iwd~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~s~~~d~~ 255 (406)
+.+.++ .|+. -..++.|++ +.+..+.+.+ ..|+.+|+.+++.+..+..... .-..+++. .+++....-.++.
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred EEEEEc-CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 445555 4553 356899986 5555666664 4899999999998887764432 22334443 2344455557899
Q ss_pred EEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC-
Q psy226 256 ARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD- 334 (406)
Q Consensus 256 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~- 334 (406)
+.++|..+.+.+..+...... ..+++ ++..|+.+..++.|.++|..+.+.+.++.-..
T Consensus 87 v~v~D~~tl~~~~ti~~~~~G-wglt~--------------------dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~ 145 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGEG-WALTS--------------------DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAG 145 (243)
T ss_dssp EEEEETTTTEEEEEEECSSCC-CEEEE--------------------CSSCEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEEEECCcCcEEEEEeCCCCc-eEEee--------------------CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccC
Confidence 999999998887776543221 12221 23345555568899999999998887765321
Q ss_pred ----cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc-------------cceEEEEEEeCCCCEEEEee
Q psy226 335 ----NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH-------------SHFVTSLDFHRAHPYVVTGS 395 (406)
Q Consensus 335 ----~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h-------------~~~v~~l~~~~~~~~l~sgs 395 (406)
..++.+.+. +|+..+..-.+..|.+.|..+++.+..+... ....+.+|++|++..|...+
T Consensus 146 g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 146 GRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 245666765 6765555556789999999999987776521 23678999999876654444
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.77 E-value=9.8e-06 Score=72.67 Aligned_cols=226 Identities=10% Similarity=0.011 Sum_probs=133.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCC-C-cEEEEeCCCCeEEE
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD-M-SLKLWDMSTYQCLK 184 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d-~-~i~vwd~~~~~~~~ 184 (406)
.....++++|+++++++-..++.|..||..++ ....+. -...+..+++.++|+++++.... + .|..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 45678999999998888778899999998764 333332 23468899999999966655432 2 46667777776533
Q ss_pred EEec-CCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe-EEEEee---------cCCccEEEEEECCCCCEE-EEEeC
Q psy226 185 TMQG-HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY-CVKTLT---------GHREWVRQIKVSPDGTLL-ASCSN 252 (406)
Q Consensus 185 ~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~---------~~~~~v~~l~~~~~~~~l-~s~~~ 252 (406)
.... .......++..+++..+++-..++.|..+|..++. .+.... +.-...+.+ +|++..+ ++-..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 2221 11223455555554445554468888888876542 121111 111234455 7787655 55556
Q ss_pred CCeEEEEeCCC-ccc--eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEE-
Q psy226 253 DHTARVWSLAT-KET--KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF- 328 (406)
Q Consensus 253 d~~v~vwd~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~- 328 (406)
.+.|..+++.. +.. ...+... .....+++.+ +|.+.++....+.|.++|.. ++...
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~vd~------------------dG~l~va~~~~~~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAFDV------------------EGNLYGATHIYNSVVRIAPD-RSTTII 247 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEEBT------------------TCCEEEECBTTCCEEEECTT-CCEEEE
T ss_pred CCEEEEEEeCCCCCCCccEEEecc-CCCCCeEECC------------------CCCEEEEeCCCCeEEEECCC-CCEEEE
Confidence 78999999864 211 1111000 0111122222 46666666667889999975 65532
Q ss_pred -EEeCCCcCEEEEEEc---CCCCEEEEEeCCC
Q psy226 329 -TLIGHDNWVRGVTFH---PGGKYLVSCGDDK 356 (406)
Q Consensus 329 -~~~~h~~~v~~l~~s---~~g~~l~sgs~d~ 356 (406)
.+.......++++|. |+++.|+.++..+
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred eecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 233233568999998 8888777666543
No 268
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.76 E-value=4.5e-06 Score=71.95 Aligned_cols=188 Identities=11% Similarity=0.105 Sum_probs=126.1
Q ss_pred EEEEEecCCcc--eEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Q psy226 182 CLKTMQGHDHN--VTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259 (406)
Q Consensus 182 ~~~~~~~h~~~--v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vw 259 (406)
.+.++ .|... ..++.|+ ++.+..+.+.+|.|+.+|+.+++.+..+......-..+++.. +++.+..-.++.+.+|
T Consensus 45 Vv~~~-phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEE
T ss_pred EEEEE-cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEE
Confidence 34444 34432 3688887 456677788888999999999988777622222334466543 3445555578999999
Q ss_pred eCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC--CC---
Q psy226 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG--HD--- 334 (406)
Q Consensus 260 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~--h~--- 334 (406)
|..+.+.+.++...... ..+++ ++..|+.+..++.|.++|..+.+.+.++.- +.
T Consensus 122 D~~Tl~~~~ti~~~~eG-wGLt~--------------------Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v 180 (268)
T 3nok_A 122 SGMPPQRERTTRYSGEG-WGLCY--------------------WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPV 180 (268)
T ss_dssp ETTTTEEEEEEECSSCC-CCEEE--------------------ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred ECCcCcEEEEEeCCCce-eEEec--------------------CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCccc
Confidence 99998877766532111 11111 245566666788999999999988877653 21
Q ss_pred cCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccc-------------cceEEEEEEeCCCC-EEEEe
Q psy226 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH-------------SHFVTSLDFHRAHP-YVVTG 394 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h-------------~~~v~~l~~~~~~~-~l~sg 394 (406)
..++.+.|. +|+..+....+..|.+.|..+++.+..+... ....+.+||+|++. +++||
T Consensus 181 ~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 181 ELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 245677776 7765555556889999999999988776532 13678999999765 45555
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.72 E-value=0.00012 Score=65.86 Aligned_cols=226 Identities=10% Similarity=0.005 Sum_probs=136.8
Q ss_pred CcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEE-eCCCcEEEEeCCC----CeEEEEEecCCcceEEEEEecCC
Q psy226 128 ATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSC-SADMSLKLWDMST----YQCLKTMQGHDHNVTGVAFLPNS 202 (406)
Q Consensus 128 g~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sg-s~d~~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~p~~ 202 (406)
..|+..|+.+.+....+. ....+.+++|++.+..|+.+ ..++.|..+++.+ ......+...-....++++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 568888988877665554 34567899999876555544 4568899999875 22122222222355789998765
Q ss_pred CEE-EEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEe-CC-CeEEEEeCCCccceeEEecCCceEEE
Q psy226 203 DFV-LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS-ND-HTARVWSLATKETKAELRGHDHTVEC 279 (406)
Q Consensus 203 ~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d-~~v~vwd~~~~~~~~~~~~~~~~v~~ 279 (406)
..| ++-...+.|.+.+.........+.........++++|.+..++.+. .. +.|...++............-.....
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~g 168 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 168 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceE
Confidence 555 4445678899999875444333333445678999998655544443 33 68888887543322222222334567
Q ss_pred EEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeE--EEEEeCCCcCEEEEEEcCCCCEEEEEeCCCe
Q psy226 280 VAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357 (406)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~--~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~ 357 (406)
+++.|. .+.+.++-+..+.|..+|+..... +...........++++. .+..+++-...+.
T Consensus 169 la~d~~-----------------~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 169 ITLDLL-----------------SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 230 (316)
T ss_dssp EEEETT-----------------TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE
T ss_pred EEEecc-----------------CCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe
Confidence 777763 234445555667899999864322 21211223456788885 3555666667789
Q ss_pred EEEEeCCCCccceee
Q psy226 358 LRVWDTANKRNMKTL 372 (406)
Q Consensus 358 i~vwd~~~~~~~~~l 372 (406)
|..+|..+++.+..+
T Consensus 231 V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 231 IFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTTCCCCEEE
T ss_pred EEEEeCCCCcceEEE
Confidence 999998777655554
No 270
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.72 E-value=8.4e-05 Score=67.28 Aligned_cols=267 Identities=11% Similarity=0.073 Sum_probs=145.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-EEEE-ec--ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE-YERA-LH--GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ 181 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~-~~~~-~~--~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~ 181 (406)
...+.+|.|.+.+..+++ +..|.|. .....|+ .... .. .....+.+|.|.+ +..++ ++.++.|.. ....++
T Consensus 35 ~~~~~~v~~~~~~~~~~~-G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLV-GVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEEE-ETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEEE-cCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEEE-ECCCCC
Confidence 457999999888888885 4567553 3333332 1221 11 1234688899976 44444 455665443 222233
Q ss_pred EEEEEe---cCCcceEEEEEecCCCEEEEEeCCCcEEE-EEcCCCeEE-EEeecCCccEEEEEECCCCCEEEEEeCCCeE
Q psy226 182 CLKTMQ---GHDHNVTGVAFLPNSDFVLSASRDKTIKM-WEVATGYCV-KTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256 (406)
Q Consensus 182 ~~~~~~---~h~~~v~~~~~~p~~~~l~s~s~d~~i~i-wd~~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v 256 (406)
.-..+. .+...+..+.+.+++..++++ .++.|.. .| .|..- ....+....+..+.+.|++.+++.+...+..
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~D--gG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~ 186 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKD--SGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFY 186 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESS--TTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEE
T ss_pred CceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcC--CCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEE
Confidence 222221 223457788887776655554 4555432 22 23221 2223455678889999999888776555444
Q ss_pred EEEeC--CCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe-C-
Q psy226 257 RVWSL--ATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI-G- 332 (406)
Q Consensus 257 ~vwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~-~- 332 (406)
+-+|- .+-+.. -......+..+.+.| ++. ++.++.+|.+++.+...|+.-..+. .
T Consensus 187 ~S~d~gG~tW~~~--~~~~~~~~~~~~~~~------------------~g~-~~~~~~~G~~~~s~~D~G~tW~~~~~~~ 245 (327)
T 2xbg_A 187 STWEPGQTAWEPH--NRTTSRRLHNMGFTP------------------DGR-LWMIVNGGKIAFSDPDNSENWGELLSPL 245 (327)
T ss_dssp EEECTTCSSCEEE--ECCSSSCEEEEEECT------------------TSC-EEEEETTTEEEEEETTEEEEECCCBCTT
T ss_pred EEeCCCCCceeEC--CCCCCCccceeEECC------------------CCC-EEEEeCCceEEEecCCCCCeeEeccCCc
Confidence 44553 222222 122334556666654 233 4455567777776422233222221 1
Q ss_pred --CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeecc---ccceEEEEEEeCCCCEEEEeeCCCeEEEee
Q psy226 333 --HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA---HSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 333 --h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~---h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~ 404 (406)
+...+.++.+.+++..++++. ++.| .+....++.-..+.. ....+.++.|.+++. ++.++.+|.|.-++
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred ccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 223588999998887777655 6766 344555554444432 234567888876555 55566789887654
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=1.1e-05 Score=76.07 Aligned_cols=153 Identities=14% Similarity=0.248 Sum_probs=98.5
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCC-C----cEEEEeCCC-C
Q psy226 108 PVIKVIFHP-VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD-M----SLKLWDMST-Y 180 (406)
Q Consensus 108 ~V~~v~~~p-~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d-~----~i~vwd~~~-~ 180 (406)
....++++| +...|..+...+.|+.+|..++....... .......|+|+++|++|+.+... + .+.+.+... .
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 356889998 45555555555889999998876554443 44567899999999966665542 2 233344321 1
Q ss_pred eEEEEEecCCcceEEEEEec-CCCEEEEEeCCCcEEEEEcCCCeEEEEee-cCCccEEEEEECCCCCE-EEEEeCCCeEE
Q psy226 181 QCLKTMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATGYCVKTLT-GHREWVRQIKVSPDGTL-LASCSNDHTAR 257 (406)
Q Consensus 181 ~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-~~~~~v~~l~~~~~~~~-l~s~~~d~~v~ 257 (406)
.....+.. .....+++++| ++.++++-..++.|..++..++....... +...+...++++|+|++ +++-...+.|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 11122222 23356788999 66666666677889999988765422222 22245678999999994 55556788999
Q ss_pred EEeCC
Q psy226 258 VWSLA 262 (406)
Q Consensus 258 vwd~~ 262 (406)
.++..
T Consensus 296 ~~~~d 300 (430)
T 3tc9_A 296 RSDYD 300 (430)
T ss_dssp EEEEE
T ss_pred EEeCC
Confidence 98865
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.70 E-value=1.1e-06 Score=89.04 Aligned_cols=238 Identities=11% Similarity=0.062 Sum_probs=131.2
Q ss_pred CeEEEEEc-CCCCEEEEEe-CCC----cEEEEEcCCC-cEEE-EecccccCeeeEEECCCCCEEEEEeCC-----CcEEE
Q psy226 108 PVIKVIFH-PVFSLMASCS-EDA----TIRLWDYETG-EYER-ALHGHLDSVQDIAFDQSGKLLVSCSAD-----MSLKL 174 (406)
Q Consensus 108 ~V~~v~~~-p~~~~latgs-~dg----~v~vwd~~~~-~~~~-~~~~h~~~V~~l~~~~~g~~l~sgs~d-----~~i~v 174 (406)
.+...+|| |||++||-+. .+| +|+++|+.++ +... .+. ....+++|+|||+.|+....| ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 67789999 9999888443 333 4999999998 6321 111 124578999999888777665 25778
Q ss_pred EeCCCCeE--EEEEe-cCCcceEEEEEecCCCEEEEEeC---CCcEEEEEcCCCe-EE--EEee-cCCccEEEEEECCCC
Q psy226 175 WDMSTYQC--LKTMQ-GHDHNVTGVAFLPNSDFVLSASR---DKTIKMWEVATGY-CV--KTLT-GHREWVRQIKVSPDG 244 (406)
Q Consensus 175 wd~~~~~~--~~~~~-~h~~~v~~~~~~p~~~~l~s~s~---d~~i~iwd~~~~~-~~--~~~~-~~~~~v~~l~~~~~~ 244 (406)
+++.+++. ...+. .......++.|+|+|++|+..+. ...|.++|+.++. .. ..+. ........+.|+.++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88876531 22222 22234567899999998876553 3468888987752 12 3332 233344445544333
Q ss_pred CEEEEEeCC----CeEEEEeCCCccceeE-EecCCc--eEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCc--
Q psy226 245 TLLASCSND----HTARVWSLATKETKAE-LRGHDH--TVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKT-- 315 (406)
Q Consensus 245 ~~l~s~~~d----~~v~vwd~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~-- 315 (406)
.+++....+ ..|..+|+.+...... +..+.. .+..+.+. ++.++++...++.
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-------------------~~~lv~~~~~~g~~~ 392 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-------------------SNYLVVAGRRAGLTR 392 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-------------------SSEEEEEEEETTEEE
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-------------------CCEEEEEEEeCCEEE
Confidence 344444433 2566667654222222 333332 34444432 2345667777775
Q ss_pred EEEEEC-------CCCeEEEEEeC-CCcCEEEEEE----cCCCC-EEEEEeCC---CeEEEEeCCCCc
Q psy226 316 IKLWDV-------GSGSLLFTLIG-HDNWVRGVTF----HPGGK-YLVSCGDD---KTLRVWDTANKR 367 (406)
Q Consensus 316 i~lwd~-------~~~~~~~~~~~-h~~~v~~l~~----s~~g~-~l~sgs~d---~~i~vwd~~~~~ 367 (406)
|.++|+ ..+.....+.- ....+..+.+ ++++. ++++.+.. ..++.+|+.+++
T Consensus 393 l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 393 IWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp EEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred EEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 555665 33331223221 1122333432 34554 44444432 457777776554
No 273
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.70 E-value=5.7e-05 Score=69.06 Aligned_cols=235 Identities=11% Similarity=0.043 Sum_probs=138.7
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEE-eCCCcEEEEEcCCCeEEEE
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA-SRDKTIKMWEVATGYCVKT 227 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~i~iwd~~~~~~~~~ 227 (406)
+..+|.+..+++ +|+.+ ....|+..++........+.+ .....+++|++.++.|+.. ...+.|..++...+.....
T Consensus 34 d~~~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~ 110 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV 110 (349)
T ss_dssp TSSCEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred CCCcccccccCc-eeEee-cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEE
Confidence 334555655543 44433 334588888876554333333 3457899999876666554 4567899999876654333
Q ss_pred eecCCccEEEEEECCC-CCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCE
Q psy226 228 LTGHREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPY 306 (406)
Q Consensus 228 ~~~~~~~v~~l~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (406)
+.........+++++. ++++++-...+.|.+.++........+.........+++.|. .+.+
T Consensus 111 ~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~-----------------~g~l 173 (349)
T 3v64_C 111 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPM-----------------EGTI 173 (349)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETT-----------------TTEE
T ss_pred EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecC-----------------cCeE
Confidence 3333344578899875 455566667789999998755433333333344566777663 2344
Q ss_pred EEEEeCC-CcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCccceeeccccceEEEEEE
Q psy226 307 LATGSRD-KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC-GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384 (406)
Q Consensus 307 l~s~~~d-~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sg-s~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~ 384 (406)
+++-... +.|..+++........+...-.+...|+++|++..|+.+ +..+.|..+|+........+...-.....|++
T Consensus 174 y~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav 253 (349)
T 3v64_C 174 YWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 253 (349)
T ss_dssp EEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred EEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE
Confidence 4444444 678888875432222222234567899999876666544 45678999998643322222222334567777
Q ss_pred eCCCCEEEEeeCCCeEEEee
Q psy226 385 HRAHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 385 ~~~~~~l~sgs~Dg~v~iw~ 404 (406)
. .+.+..+-...+.|..++
T Consensus 254 ~-~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 254 F-EDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp E-TTEEEEEETTTTEEEEEE
T ss_pred E-CCEEEEecCCCCeEEEEE
Confidence 3 444555555566666554
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.64 E-value=0.00026 Score=65.95 Aligned_cols=238 Identities=10% Similarity=-0.005 Sum_probs=145.0
Q ss_pred CCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe-CCCcEEEEeCCCC----eEEEEEecCCcceEEEEEecC
Q psy226 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS-ADMSLKLWDMSTY----QCLKTMQGHDHNVTGVAFLPN 201 (406)
Q Consensus 127 dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs-~d~~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~ 201 (406)
...|+..|+.+......+. ....+..|+|++.+..|+.+. ..+.|..+++... .....+........++++.+.
T Consensus 91 ~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 4678888888776555443 345678999998666665554 5678888888652 222223323456788999985
Q ss_pred CCEE-EEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEe-C-CCeEEEEeCCCccceeEEecCCceEE
Q psy226 202 SDFV-LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS-N-DHTARVWSLATKETKAELRGHDHTVE 278 (406)
Q Consensus 202 ~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~-d~~v~vwd~~~~~~~~~~~~~~~~v~ 278 (406)
+..| ++-...+.|.+.++........+...-.....|+++|.+..|+... . .+.|...++............-....
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceE
Confidence 5544 4555678899999876554444444445678999999655554443 2 37888888865443333333334456
Q ss_pred EEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCEEEEEEcCCCCEEEEEeCCC
Q psy226 279 CVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGKYLVSCGDDK 356 (406)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~--~h~~~v~~l~~s~~g~~l~sgs~d~ 356 (406)
.+++.|. .+.+.++-...+.|..+|+.......... +.-....++++. .+..+.+-...+
T Consensus 250 glavd~~-----------------~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~ 311 (400)
T 3p5b_L 250 GITLDLL-----------------SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 311 (400)
T ss_dssp EEEEETT-----------------TTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSC
T ss_pred EEEEEeC-----------------CCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCC
Confidence 7777763 23344444556789999986433222222 223456677773 344555666778
Q ss_pred eEEEEeCCCCccceeeccccceEEEEE
Q psy226 357 TLRVWDTANKRNMKTLEAHSHFVTSLD 383 (406)
Q Consensus 357 ~i~vwd~~~~~~~~~l~~h~~~v~~l~ 383 (406)
.|..+|..+++.+..+........++.
T Consensus 312 ~V~~~~~~~G~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 312 AIFSANRLTGSDVNLLAENLLSPEDMV 338 (400)
T ss_dssp SEEEEESSSCCCCEEEECSCSCEEEEE
T ss_pred eEEEEEcCCCCceEEEecCCCCCceEE
Confidence 899999878877666653333334443
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.63 E-value=5.8e-05 Score=65.24 Aligned_cols=201 Identities=9% Similarity=0.144 Sum_probs=130.0
Q ss_pred EecccccCeeeEEECCCCCEEE-EEeCCCcEEEEeCCCCeEEEEEec-CCcceEEEEEecCCCEEEEEeCCCcEEEEEcC
Q psy226 143 ALHGHLDSVQDIAFDQSGKLLV-SCSADMSLKLWDMSTYQCLKTMQG-HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220 (406)
Q Consensus 143 ~~~~h~~~V~~l~~~~~g~~l~-sgs~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~ 220 (406)
.+.+-.+.+..++|+|++..|+ +...++.|...|.. ++.++.+.- -.....++++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4555556799999999876555 46678889999987 777777642 23567889999888777776677889898876
Q ss_pred CCeE---EEEee------cCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCC---ccceeEEe-------cCCceEEEEE
Q psy226 221 TGYC---VKTLT------GHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT---KETKAELR-------GHDHTVECVA 281 (406)
Q Consensus 221 ~~~~---~~~~~------~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~---~~~~~~~~-------~~~~~v~~~~ 281 (406)
.... +.... ..+.....++++|.++.|+++.......+|.+.. ......+. .+......++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 22221 1233457999999997777776655555555531 11111111 1122345566
Q ss_pred eCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC---------CcCEEEEEEcCCCCEEEEE
Q psy226 282 WAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH---------DNWVRGVTFHPGGKYLVSC 352 (406)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h---------~~~v~~l~~s~~g~~l~sg 352 (406)
+.|. .+.+++.....+.|..+|.. |+.+..+.-. -...-.|+|+++|+..+ .
T Consensus 180 ~dp~-----------------tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-v 240 (255)
T 3qqz_A 180 FNQQ-----------------KNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-V 240 (255)
T ss_dssp EETT-----------------TTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-E
T ss_pred EcCC-----------------CCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-E
Confidence 6653 46677777788889999975 5554433211 12568999999998544 4
Q ss_pred eCCCeEEEEeC
Q psy226 353 GDDKTLRVWDT 363 (406)
Q Consensus 353 s~d~~i~vwd~ 363 (406)
++-+.++++..
T Consensus 241 sE~n~~y~f~~ 251 (255)
T 3qqz_A 241 SEPNRFYRFTP 251 (255)
T ss_dssp ETTTEEEEEEC
T ss_pred cCCceEEEEEe
Confidence 77777877754
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.62 E-value=3.6e-05 Score=72.51 Aligned_cols=244 Identities=12% Similarity=0.146 Sum_probs=135.9
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCC---Cc-EEEEeCCCC-
Q psy226 108 PVIKVIFHPV--FSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD---MS-LKLWDMSTY- 180 (406)
Q Consensus 108 ~V~~v~~~p~--~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d---~~-i~vwd~~~~- 180 (406)
....++++|+ ...|..+...+.|+.+|..++...... .......+++++++|+++++.... .. +...+....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568999995 344444444489999999888765543 344568899999999944443321 11 333332211
Q ss_pred eEEEEEecCCcceEEEEEec-CCCEEEEEeCCCcEEEEEcCCCeEEEEe-e-cCCccEEEEEECCCCCE-EEEEeCCCeE
Q psy226 181 QCLKTMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATGYCVKTL-T-GHREWVRQIKVSPDGTL-LASCSNDHTA 256 (406)
Q Consensus 181 ~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~-~~~~~v~~l~~~~~~~~-l~s~~~d~~v 256 (406)
.....+. .-.....++++| ++.+.++-..++.|+.+|..++.....+ . +....-..++++|+|+. +++-...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1011111 123345688999 6666556556788999998877652222 2 12233446999999984 4555567899
Q ss_pred EEEeCCC--ccc--eeEEecC---------------CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEE
Q psy226 257 RVWSLAT--KET--KAELRGH---------------DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIK 317 (406)
Q Consensus 257 ~vwd~~~--~~~--~~~~~~~---------------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 317 (406)
+.+++.. ... ...+.+. -.....+++.+... . ......+.+.++-...+.|+
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~------y---~~dd~~g~lyvaD~~n~~I~ 368 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEA------Y---AGEEDEYDFYFCDRDSHTVR 368 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGG------G---TTSSCCEEEEEEETTTTEEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcccc------c---cccCCCCcEEEEECCCCEEE
Confidence 9988652 211 1111111 00122233310000 0 00012345555555667888
Q ss_pred EEECCCCeEEEEEeCC------------------CcCEEEEEEc-CCCCEEEEEeCCCeEEEEeCC
Q psy226 318 LWDVGSGSLLFTLIGH------------------DNWVRGVTFH-PGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 318 lwd~~~~~~~~~~~~h------------------~~~v~~l~~s-~~g~~l~sgs~d~~i~vwd~~ 364 (406)
.++. +|. +.++.+. -.....|+++ ++|.++++=..+++|+.++.+
T Consensus 369 ~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 369 VLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 8884 554 3343332 1246788888 566666666667788877653
No 277
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.56 E-value=0.00013 Score=67.75 Aligned_cols=233 Identities=11% Similarity=0.039 Sum_probs=138.7
Q ss_pred eeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEE-eCCCcEEEEEcCCCeEEEEee
Q psy226 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA-SRDKTIKMWEVATGYCVKTLT 229 (406)
Q Consensus 151 V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~ 229 (406)
-.|.+..+. .+|+.+ ....|+..++.+......+. ......+++|.+.++.|+.. ...+.|..++...+.....+.
T Consensus 79 ~~C~~~~~~-~~l~~~-~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 79 RSCKALGPE-PVLLFA-NRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEECSSC-CEEEEE-CBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CeECCcccc-ceeEee-cCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 345555553 344443 34568888887655433333 33457899999876655544 456789999987665444333
Q ss_pred cCCccEEEEEECCC-CCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEE
Q psy226 230 GHREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA 308 (406)
Q Consensus 230 ~~~~~v~~l~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 308 (406)
........+++++. +.++++-...+.|.+.++........+.........++..|. .+.+++
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~-----------------~g~ly~ 218 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPM-----------------EGTIYW 218 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETT-----------------TTEEEE
T ss_pred CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcC-----------------CCeEEE
Confidence 33334567888875 455566666788999888654433333333344566776663 233444
Q ss_pred EEeCC-CcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCccceeeccccceEEEEEEeC
Q psy226 309 TGSRD-KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC-GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR 386 (406)
Q Consensus 309 s~~~d-~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sg-s~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~ 386 (406)
+-... +.|..+++............-.+...|+|+|++..|+.+ +..+.|..+|+........+.........|++.
T Consensus 219 td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~- 297 (386)
T 3v65_B 219 TDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF- 297 (386)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-
T ss_pred eccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-
Confidence 44444 678888875433322233334568899999876666544 556889999986433322233223345677773
Q ss_pred CCCEEEEeeCCCeEEEee
Q psy226 387 AHPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 387 ~~~~l~sgs~Dg~v~iw~ 404 (406)
.+.+..+....+.|..++
T Consensus 298 ~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 298 EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp TTEEEEEETTTTEEEEEE
T ss_pred CCEEEEeeCCCCeEEEEE
Confidence 445556666667776665
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=6.2e-05 Score=70.91 Aligned_cols=234 Identities=12% Similarity=0.152 Sum_probs=138.1
Q ss_pred CeeeEEECC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCC-C----cEEEEEcCCCe
Q psy226 150 SVQDIAFDQ-SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD-K----TIKMWEVATGY 223 (406)
Q Consensus 150 ~V~~l~~~~-~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-~----~i~iwd~~~~~ 223 (406)
....|+++| ++..|+.+...+.|+.+|+.++... .+.........++|++++++|+.+... + .+.+.+.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 356789998 4556666655588999999876543 333345567899999999966665542 2 23334432221
Q ss_pred E-EEEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEeCCCccceeEEec-CCceEEEEEeCCCCCccccccccCCCCC
Q psy226 224 C-VKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRG-HDHTVECVAWAPGVASESISEAAGRPPG 300 (406)
Q Consensus 224 ~-~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 300 (406)
. ...+.. ......++++| +|.++++-..++.|..++............ .......++++|
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~p---------------- 279 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHP---------------- 279 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECT----------------
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcC----------------
Confidence 1 122221 22346788999 777777777788999999876543222111 112345677776
Q ss_pred CCCCC-EEEEEeCCCcEEEEECCC--CeE--EEEEeCC---------------CcCEE-EEEEc--------CCCCEEEE
Q psy226 301 QGGGP-YLATGSRDKTIKLWDVGS--GSL--LFTLIGH---------------DNWVR-GVTFH--------PGGKYLVS 351 (406)
Q Consensus 301 ~~~~~-~l~s~~~d~~i~lwd~~~--~~~--~~~~~~h---------------~~~v~-~l~~s--------~~g~~l~s 351 (406)
.+. ++++-...+.|..++... +.. +..+.+. -.... .++.. ++|.+.++
T Consensus 280 --dG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyva 357 (430)
T 3tc9_A 280 --SGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFC 357 (430)
T ss_dssp --TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEE
T ss_pred --CCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEE
Confidence 355 444445667888877542 222 1122211 11233 55553 44666666
Q ss_pred EeCCCeEEEEeCCCCccceeeccc------------------cceEEEEEEeC-CCCEEEEeeCCCeEEEeec
Q psy226 352 CGDDKTLRVWDTANKRNMKTLEAH------------------SHFVTSLDFHR-AHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 352 gs~d~~i~vwd~~~~~~~~~l~~h------------------~~~v~~l~~~~-~~~~l~sgs~Dg~v~iw~~ 405 (406)
=...+.|+.++. ++.. .++.+. -.....|+++| ++.++++-.....|+.++.
T Consensus 358 D~~n~~I~~i~~-~G~v-~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 358 DRENHCIRILTP-QGRV-TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EGGGTEEEEECT-TSEE-EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ECCCcEEEEECC-CCcE-EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 667788999883 4432 222211 11478999999 5667777777788887764
No 279
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.50 E-value=1.9e-05 Score=78.83 Aligned_cols=239 Identities=13% Similarity=0.116 Sum_probs=132.5
Q ss_pred eEEECC-CCCEEEEEeCCC-----------cEEEEeCCCCeE--EEEEec-CCcceEEEEEecCCCEEEEEeC-CCcEEE
Q psy226 153 DIAFDQ-SGKLLVSCSADM-----------SLKLWDMSTYQC--LKTMQG-HDHNVTGVAFLPNSDFVLSASR-DKTIKM 216 (406)
Q Consensus 153 ~l~~~~-~g~~l~sgs~d~-----------~i~vwd~~~~~~--~~~~~~-h~~~v~~~~~~p~~~~l~s~s~-d~~i~i 216 (406)
++++.+ +|++++.|+.+. .+.+||..+++. +..+.. +.....++++.+++.+++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556666 888888887543 588999876542 223322 2233445777889999999884 568999
Q ss_pred EEcCCCeEEEEeecC-CccEEEEEECCCCCEEEEEe-CC-----CeEEEEeCCCccceeEEecCCceEEEEEeCCCCCcc
Q psy226 217 WEVATGYCVKTLTGH-REWVRQIKVSPDGTLLASCS-ND-----HTARVWSLATKETKAELRGHDHTVECVAWAPGVASE 289 (406)
Q Consensus 217 wd~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~s~~-~d-----~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 289 (406)
||..+..-...-..+ ..+-.+++..++|++++.|+ .+ ..+.+||..+..-. .+.... ..|.....
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~-~~~~~~-------~~p~~~~~ 341 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT-SLPNAK-------VNPMLTAD 341 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE-EETTSC-------SGGGCCCC
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce-eCCCcc-------cccccccc
Confidence 999877543322111 12223456667999999988 44 56888998654311 110000 00000000
Q ss_pred ccccccCCCCCCCCCCEEEEEeCC---------CcEEEEECCCCeEEEEEeCCC---------cCEEEEEEcC-CCCEEE
Q psy226 290 SISEAAGRPPGQGGGPYLATGSRD---------KTIKLWDVGSGSLLFTLIGHD---------NWVRGVTFHP-GGKYLV 350 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s~~~d---------~~i~lwd~~~~~~~~~~~~h~---------~~v~~l~~s~-~g~~l~ 350 (406)
.. . ....++..++.|+.+ ..+..||..+..-......+. ..-.++.|.. +++.++
T Consensus 342 ~~-~-----~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 342 KQ-G-----LYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT 415 (656)
T ss_dssp TT-G-----GGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred cc-c-----eeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence 00 0 000123334444433 356788887765433222121 1234555543 677888
Q ss_pred EEeCCC-----------eEEEEeCCCCccceee--ccccc-eEEEEEEeCCCCEEEEeeCC-----------CeEEEeec
Q psy226 351 SCGDDK-----------TLRVWDTANKRNMKTL--EAHSH-FVTSLDFHRAHPYVVTGSVD-----------KTVKVWEC 405 (406)
Q Consensus 351 sgs~d~-----------~i~vwd~~~~~~~~~l--~~h~~-~v~~l~~~~~~~~l~sgs~D-----------g~v~iw~~ 405 (406)
.|+.++ .|.+||..+..-.... ..... .-.+++..|++++++.||.+ ..+.+||.
T Consensus 416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp 495 (656)
T 1k3i_A 416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVP 495 (656)
T ss_dssp ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEG
T ss_pred EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcC
Confidence 887543 6888887765432221 11111 12244566899999999865 45788874
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.48 E-value=0.00018 Score=64.67 Aligned_cols=228 Identities=9% Similarity=0.019 Sum_probs=135.4
Q ss_pred CCcEEEEEcCCCc--EEEEecccccCeeeEEECCCCCEEE-EEeCCCcEEEEeCCCCeEE-EEEecCCcceEEEEEecCC
Q psy226 127 DATIRLWDYETGE--YERALHGHLDSVQDIAFDQSGKLLV-SCSADMSLKLWDMSTYQCL-KTMQGHDHNVTGVAFLPNS 202 (406)
Q Consensus 127 dg~v~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~g~~l~-sgs~d~~i~vwd~~~~~~~-~~~~~h~~~v~~~~~~p~~ 202 (406)
...|+..|+.+.. ....+. ....+.+++|++.+..|+ +-...+.|..+++...... ..+...-....++++.+.+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 3567888887653 222222 223566899998655554 4455678999988765311 1222222346678998755
Q ss_pred CEE-EEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEe--CCCeEEEEeCCCccceeEEecCCceEEE
Q psy226 203 DFV-LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS--NDHTARVWSLATKETKAELRGHDHTVEC 279 (406)
Q Consensus 203 ~~l-~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~v~~ 279 (406)
..| ++-...+.|.++++........+.........++++|.+..|+.+. ..+.|...++............-.....
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Png 170 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNG 170 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccE
Confidence 544 4545667899999865433333334445678999998655554444 3578888887643322222222234567
Q ss_pred EEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEE
Q psy226 280 VAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359 (406)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~ 359 (406)
++++|. ++.+.++-+..+.|..+|+........+.+......++++.. +..+.+-...+.|.
T Consensus 171 lavd~~-----------------~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~ 232 (318)
T 3sov_A 171 LTLDYE-----------------EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSIL 232 (318)
T ss_dssp EEEETT-----------------TTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred EEEecc-----------------CCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEE
Confidence 777763 234444555667899998864332222233345567788763 34555666778999
Q ss_pred EEeCCCCccceeec
Q psy226 360 VWDTANKRNMKTLE 373 (406)
Q Consensus 360 vwd~~~~~~~~~l~ 373 (406)
.+|..+++....+.
T Consensus 233 ~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 233 ACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTTCCSCEEEE
T ss_pred EEECCCCCceEEEe
Confidence 99987776655543
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.48 E-value=0.0002 Score=67.89 Aligned_cols=254 Identities=13% Similarity=0.156 Sum_probs=143.1
Q ss_pred CeEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCcEEEEeccc---ccCeeeEEE-------CCCCCEEEEEeCCC-----
Q psy226 108 PVIKVIFHPV--FSLMASCSEDATIRLWDYETGEYERALHGH---LDSVQDIAF-------DQSGKLLVSCSADM----- 170 (406)
Q Consensus 108 ~V~~v~~~p~--~~~latgs~dg~v~vwd~~~~~~~~~~~~h---~~~V~~l~~-------~~~g~~l~sgs~d~----- 170 (406)
....|+|.|. +.++++-...+.|++.|..++.+...+... ......|+| +++|+.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4568999984 455555555578999999988776655432 235788999 99999776665543
Q ss_pred --cEEEEeCCC-CeEE-----EEEecCCcceEEEEEecCCC-EEEEEeCCCcEEEEEcC-------CCeE----------
Q psy226 171 --SLKLWDMST-YQCL-----KTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVA-------TGYC---------- 224 (406)
Q Consensus 171 --~i~vwd~~~-~~~~-----~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~iwd~~-------~~~~---------- 224 (406)
.|.+.+... +... ..+.... ...+++++|++. ++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 255665333 1111 1222222 334678899554 55556677889999987 5543
Q ss_pred -EEE-e-ecCCccEEEEEECCCCCE-EEEEeCCCeEEEEeCCCcc--c--eeEEecCCceEEEEEeCCCCCccccccccC
Q psy226 225 -VKT-L-TGHREWVRQIKVSPDGTL-LASCSNDHTARVWSLATKE--T--KAELRGHDHTVECVAWAPGVASESISEAAG 296 (406)
Q Consensus 225 -~~~-~-~~~~~~v~~l~~~~~~~~-l~s~~~d~~v~vwd~~~~~--~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 296 (406)
... + .+...+...++|+|+|+. .++=+..+.|+.++..... . ...+.+.... -.+..+ ........
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~---~G~~DG---~~~~a~f~ 372 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ---SGYRDD---VGTEARMN 372 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB---CCCBCC---BGGGCBCS
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC---CcccCC---cccccccC
Confidence 112 1 123345678999999995 4555567889887654321 1 0112111000 000000 00000000
Q ss_pred CCC----C-------CCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCC------------------------CcCEEEEE
Q psy226 297 RPP----G-------QGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH------------------------DNWVRGVT 341 (406)
Q Consensus 297 ~~~----~-------~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h------------------------~~~v~~l~ 341 (406)
.|. . ...+.+.++=.....||.++ .+|. +.++.+. -.....|+
T Consensus 373 ~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIa 450 (496)
T 3kya_A 373 NPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLV 450 (496)
T ss_dssp SEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEE
T ss_pred CCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEE
Confidence 000 0 02345555556677888888 4564 3344322 12467899
Q ss_pred EcCC-CCEEEEEeCCCeEEEEeCCCCccce
Q psy226 342 FHPG-GKYLVSCGDDKTLRVWDTANKRNMK 370 (406)
Q Consensus 342 ~s~~-g~~l~sgs~d~~i~vwd~~~~~~~~ 370 (406)
++++ |.++++=..+.+||.+++.....+.
T Consensus 451 vd~~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 451 YDDVKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCCC---
T ss_pred EECCCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 9996 7776766678899999887655443
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.47 E-value=0.00035 Score=60.37 Aligned_cols=182 Identities=12% Similarity=0.174 Sum_probs=117.5
Q ss_pred EeccCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEec-ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC
Q psy226 101 ALSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178 (406)
Q Consensus 101 ~l~~h~~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~ 178 (406)
.+.|-...+..++++|++. ++++...++.|...|.. ++..+.+. +-......|++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 3567777899999999866 55567788999999998 88777764 222567788999888877776677888888876
Q ss_pred CCe---EEEEEe------cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcC---CCeEEEEee-------cCCccEEEEE
Q psy226 179 TYQ---CLKTMQ------GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA---TGYCVKTLT-------GHREWVRQIK 239 (406)
Q Consensus 179 ~~~---~~~~~~------~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~-------~~~~~v~~l~ 239 (406)
... .+.... ..+....+++|+|.++.|+++.......+|.+. ....+..+. .+...+..++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 433 122221 134457899999999877776665555555553 111122221 1223467899
Q ss_pred ECCCCCEE-EEEeCCCeEEEEeCCCccceeEEecC---------CceEEEEEeCC
Q psy226 240 VSPDGTLL-ASCSNDHTARVWSLATKETKAELRGH---------DHTVECVAWAP 284 (406)
Q Consensus 240 ~~~~~~~l-~s~~~d~~v~vwd~~~~~~~~~~~~~---------~~~v~~~~~~~ 284 (406)
++|....+ +....++.+.++|.... .+..+.-. -...+.+++.|
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~ 233 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDA 233 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECC
Confidence 99965554 55556778888887543 44333221 12457777776
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.47 E-value=0.00019 Score=67.62 Aligned_cols=234 Identities=16% Similarity=0.185 Sum_probs=139.9
Q ss_pred CeeeEEECCC--CCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCC---Cc-EEEEEcCCCe
Q psy226 150 SVQDIAFDQS--GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD---KT-IKMWEVATGY 223 (406)
Q Consensus 150 ~V~~l~~~~~--g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~-i~iwd~~~~~ 223 (406)
....|+|+|+ +..|+.+...+.|+.+|..+++.. .+........+++++++++++++.... .. +...+...+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~-~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD-IKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE-EECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE-EeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCe
Confidence 3568999984 445555554488999999877654 444445568899999999944443311 11 3333332221
Q ss_pred EE-EEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEeCCCccceeEE-ecC-CceEEEEEeCCCCCccccccccCCCC
Q psy226 224 CV-KTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAEL-RGH-DHTVECVAWAPGVASESISEAAGRPP 299 (406)
Q Consensus 224 ~~-~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~v~vwd~~~~~~~~~~-~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~ 299 (406)
.. ..+. .-.....++++| +|.++++-..++.|+.+|..++.....+ ... ......++++|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dp--------------- 282 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHP--------------- 282 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECT---------------
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeC---------------
Confidence 10 1111 123345688999 7777777667889999998755442222 111 11123466666
Q ss_pred CCCCCC-EEEEEeCCCcEEEEECC--CCeE--EEEEeCC---------------CcCEEEEEE---------cCCCCEEE
Q psy226 300 GQGGGP-YLATGSRDKTIKLWDVG--SGSL--LFTLIGH---------------DNWVRGVTF---------HPGGKYLV 350 (406)
Q Consensus 300 ~~~~~~-~l~s~~~d~~i~lwd~~--~~~~--~~~~~~h---------------~~~v~~l~~---------s~~g~~l~ 350 (406)
.+. +.++-...+.|+.++.. ++.. ...+.+. -.....+++ .++|.+.+
T Consensus 283 ---dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyv 359 (433)
T 4hw6_A 283 ---TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYF 359 (433)
T ss_dssp ---TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEE
T ss_pred ---CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEE
Confidence 355 44444556788887754 2321 1122221 124677999 78888878
Q ss_pred EEeCCCeEEEEeCCCCccceeeccc------------------cceEEEEEEe-CCCCEEEEeeCCCeEEEeec
Q psy226 351 SCGDDKTLRVWDTANKRNMKTLEAH------------------SHFVTSLDFH-RAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 351 sgs~d~~i~vwd~~~~~~~~~l~~h------------------~~~v~~l~~~-~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+-...+.|+.++. ++. +.++.+. -.....|+++ +++.++++-...+.|+.++.
T Consensus 360 aD~~n~~I~~~~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 360 CDRDSHTVRVLTP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EETTTTEEEEECT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EECCCCEEEEECC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 7778889999985 443 2222211 1236789999 67777777777888888764
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.45 E-value=0.00082 Score=62.53 Aligned_cols=216 Identities=12% Similarity=0.004 Sum_probs=130.4
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC----cEEEEecccccCeeeEEECCCCCEE-EEEeCCCcEEEEeCCC
Q psy226 106 RSPVIKVIFHPVFS-LMASCSEDATIRLWDYETG----EYERALHGHLDSVQDIAFDQSGKLL-VSCSADMSLKLWDMST 179 (406)
Q Consensus 106 ~~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~----~~~~~~~~h~~~V~~l~~~~~g~~l-~sgs~d~~i~vwd~~~ 179 (406)
...+..++|++... ++.+-...+.|+.++.... .....+.........|++.+.+..| ++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 45678899998655 4445556788888887652 2333343344567889998754444 4545678899999876
Q ss_pred CeEEEEEecCCcceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEE-eCCCeE
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASC-SNDHTA 256 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~v 256 (406)
......+...-....++++.|.+..|+.... .+.|...++............-.+.+.|++++++..|..+ ...+.|
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I 270 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 270 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEE
Confidence 5443333334445789999997776665543 3678888876443333333444678899999876666554 456889
Q ss_pred EEEeCCCccceeEEec--CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCC
Q psy226 257 RVWSLATKETKAELRG--HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334 (406)
Q Consensus 257 ~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~ 334 (406)
..+|+........... .......++.. .+.++++-...+.|..+|..+|+.+..+....
T Consensus 271 ~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-------------------~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 271 SSIDVNGGNRKTILEDEKRLAHPFSLAVF-------------------EDKVFWTDIINEAIFSANRLTGSDVNLLAENL 331 (400)
T ss_dssp EEEETTSCCCEEEEECSSTTSSEEEEEEE-------------------TTEEEEEESSSCSEEEEESSSCCCCEEEECSC
T ss_pred EEEeCCCCccEEEEeCCCCCCCCEEEEEe-------------------CCEEEEecCCCCeEEEEEcCCCCceEEEecCC
Confidence 9999865433322221 11112233321 23455555666778888877776655554433
Q ss_pred cCEEEE
Q psy226 335 NWVRGV 340 (406)
Q Consensus 335 ~~v~~l 340 (406)
....++
T Consensus 332 ~~p~~i 337 (400)
T 3p5b_L 332 LSPEDM 337 (400)
T ss_dssp SCEEEE
T ss_pred CCCceE
Confidence 334444
No 285
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.44 E-value=0.00082 Score=60.36 Aligned_cols=220 Identities=13% Similarity=0.048 Sum_probs=129.7
Q ss_pred EEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEE-eCCCcEEEEEcCC----CeEEEEeecCCccEEE
Q psy226 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA-SRDKTIKMWEVAT----GYCVKTLTGHREWVRQ 237 (406)
Q Consensus 163 l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~-s~d~~i~iwd~~~----~~~~~~~~~~~~~v~~ 237 (406)
|+.+. ...|+..|+.+.+....+. ......+++|++.++.|+.+ ...+.|..+++.. ......+...-.....
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEEC-CCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 44433 3568889988765544443 34567899999876655554 4568899999875 2222223222234578
Q ss_pred EEECCCC-CEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC-Cc
Q psy226 238 IKVSPDG-TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD-KT 315 (406)
Q Consensus 238 l~~~~~~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-~~ 315 (406)
+++++.+ ++.++-...+.|.++++........+.........++..|. ++.++++.... +.
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~-----------------~g~ly~~d~~~~~~ 144 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPV-----------------HGFMYWTDWGTPAK 144 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETT-----------------TTEEEEEECSSSCE
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCC-----------------CCEEEEEccCCCCe
Confidence 8998754 55566667889999998754333333322334566666652 23334443333 67
Q ss_pred EEEEECCCCeEEEEE-eCCCcCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCccceeecc---ccceEEEEEEeCCCCE
Q psy226 316 IKLWDVGSGSLLFTL-IGHDNWVRGVTFHPGGKYLVSC-GDDKTLRVWDTANKRNMKTLEA---HSHFVTSLDFHRAHPY 390 (406)
Q Consensus 316 i~lwd~~~~~~~~~~-~~h~~~v~~l~~s~~g~~l~sg-s~d~~i~vwd~~~~~~~~~l~~---h~~~v~~l~~~~~~~~ 390 (406)
|...++.. .....+ ...-.+...++++|++..|+.+ +..+.|..+|+.. ...+.+.. .-.....|++.. +.+
T Consensus 145 I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~~-~~l 221 (316)
T 1ijq_A 145 IKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVFE-DKV 221 (316)
T ss_dssp EEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEET-TEE
T ss_pred EEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEEC-CEE
Confidence 88888743 322333 2334578899999987666554 4567999999864 33333321 122356777753 555
Q ss_pred EEEeeCCCeEEEee
Q psy226 391 VVTGSVDKTVKVWE 404 (406)
Q Consensus 391 l~sgs~Dg~v~iw~ 404 (406)
.++-...+.|..++
T Consensus 222 y~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 222 FWTDIINEAIFSAN 235 (316)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCeEEEEe
Confidence 56666667777665
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.42 E-value=1.3e-05 Score=81.22 Aligned_cols=190 Identities=17% Similarity=0.215 Sum_probs=111.8
Q ss_pred ceEEEEEe-cCCCEEEEEeC-CC----cEEEEEcCCC-eEEE-EeecCCccEEEEEECCCCCEEEEEeCC-----CeEEE
Q psy226 192 NVTGVAFL-PNSDFVLSASR-DK----TIKMWEVATG-YCVK-TLTGHREWVRQIKVSPDGTLLASCSND-----HTARV 258 (406)
Q Consensus 192 ~v~~~~~~-p~~~~l~s~s~-d~----~i~iwd~~~~-~~~~-~~~~~~~~v~~l~~~~~~~~l~s~~~d-----~~v~v 258 (406)
.+...+|+ |||++|+.+.. +| +|+++|+.++ ..+. .+. .....++|+|||+.|+....| ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 99998775433 32 5999999988 5321 111 113467899999888777665 35788
Q ss_pred EeCCCccce--eEEe-cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC---CCcEEEEECCCC--eE-EEE
Q psy226 259 WSLATKETK--AELR-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR---DKTIKLWDVGSG--SL-LFT 329 (406)
Q Consensus 259 wd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~lwd~~~~--~~-~~~ 329 (406)
+++.+.... ..+. ........+.|+| +|.+|+..+. ...|.++|+.++ .. +..
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp------------------Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 313 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAA------------------DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEI 313 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECT------------------TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEE
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECC------------------CCCEEEEEecCCCCceEEEEECCCCCCCceeEE
Confidence 888765422 2222 2223345677877 3666665542 346888998775 22 133
Q ss_pred Ee-CCCcCEEEEEEcCCCCEEEEEeCC----CeEEEEeCCCCcccee-eccccc--eEEEEEEeCCCCEEEEeeCCCeEE
Q psy226 330 LI-GHDNWVRGVTFHPGGKYLVSCGDD----KTLRVWDTANKRNMKT-LEAHSH--FVTSLDFHRAHPYVVTGSVDKTVK 401 (406)
Q Consensus 330 ~~-~h~~~v~~l~~s~~g~~l~sgs~d----~~i~vwd~~~~~~~~~-l~~h~~--~v~~l~~~~~~~~l~sgs~Dg~v~ 401 (406)
+. .......++.|+.++.+++....+ ..|..+|+.++..... +-.+.. .+..+++. .+.++++...||..+
T Consensus 314 l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~ 392 (751)
T 2xe4_A 314 VRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTR 392 (751)
T ss_dssp SSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEE
T ss_pred eecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEE
Confidence 32 334455566655544455554443 3677778765323333 333332 45666665 334567777888765
Q ss_pred Ee
Q psy226 402 VW 403 (406)
Q Consensus 402 iw 403 (406)
+|
T Consensus 393 l~ 394 (751)
T 2xe4_A 393 IW 394 (751)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.38 E-value=0.00031 Score=63.20 Aligned_cols=204 Identities=13% Similarity=0.033 Sum_probs=121.8
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEEcCCCcE-EEEecccccCeeeEEECCCCCEE-EEEeCCCcEEEEeCCCCeEEE
Q psy226 108 PVIKVIFHPV-FSLMASCSEDATIRLWDYETGEY-ERALHGHLDSVQDIAFDQSGKLL-VSCSADMSLKLWDMSTYQCLK 184 (406)
Q Consensus 108 ~V~~v~~~p~-~~~latgs~dg~v~vwd~~~~~~-~~~~~~h~~~V~~l~~~~~g~~l-~sgs~d~~i~vwd~~~~~~~~ 184 (406)
.+.+++|++. +.++.+-...+.|..++..++.. ...+.........+++.+.+..| ++-...+.|.++++.......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 115 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKV 115 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEE
Confidence 4668899985 45556666778899999877632 22222233456789998755544 454566789999987543222
Q ss_pred EEecCCcceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEE-EEEeCCCeEEEEeC
Q psy226 185 TMQGHDHNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL-ASCSNDHTARVWSL 261 (406)
Q Consensus 185 ~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~d~~v~vwd~ 261 (406)
.+........++++.|.+..|+.+.. .+.|...+.............-...+.|+++|++..| ++=+..+.|..+|+
T Consensus 116 l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 116 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp EECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 22233455789999997776666553 4678877775332222223334567899999866555 45456788999998
Q ss_pred CCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEE
Q psy226 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTL 330 (406)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~ 330 (406)
..........+.......++.. .+.++.+-...+.|..+|..+|+....+
T Consensus 196 dG~~~~~~~~~~~~~P~glav~-------------------~~~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 196 DGTNRQAVVKGSLPHPFALTLF-------------------EDILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TSCSCEEEECSCCSCEEEEEEE-------------------TTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCceEEEecCCCCCceEEEEe-------------------CCEEEEEecCCCeEEEEECCCCCceEEE
Confidence 6533322222122222333332 1334455555667777787666544443
No 288
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.33 E-value=0.0012 Score=66.86 Aligned_cols=228 Identities=11% Similarity=0.008 Sum_probs=136.0
Q ss_pred CCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEE-EEeCCCcEEEEeCCCC----eEEEEEecCCcceEEEEEecC
Q psy226 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV-SCSADMSLKLWDMSTY----QCLKTMQGHDHNVTGVAFLPN 201 (406)
Q Consensus 127 dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~-sgs~d~~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~ 201 (406)
...|+..++....+...+. ....+.+|+|++.+..|+ +-...+.|+.+++... .....+........+|++.+.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 4567777777666554444 345677899998655554 4445678888888642 122223323445678999987
Q ss_pred CCEEE-EEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEe-CC-CeEEEEeCCCccceeEEecCCceEE
Q psy226 202 SDFVL-SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS-ND-HTARVWSLATKETKAELRGHDHTVE 278 (406)
Q Consensus 202 ~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d-~~v~vwd~~~~~~~~~~~~~~~~v~ 278 (406)
++.|+ +-...+.|.+.++........+.........|+++|.+..|+... .. +.|.+.++........+........
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~ 561 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 561 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCce
Confidence 76555 445578899999876554444444445678999999755544443 33 7888888865444333333334456
Q ss_pred EEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC--CCcCEEEEEEcCCCCEEEEEeCCC
Q psy226 279 CVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG--HDNWVRGVTFHPGGKYLVSCGDDK 356 (406)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~--h~~~v~~l~~s~~g~~l~sgs~d~ 356 (406)
.+++.+. .+.+.++-...+.|...++........+.. .-....+|++.. +..+++-...+
T Consensus 562 GLavD~~-----------------~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~ 623 (791)
T 3m0c_C 562 GITLDLL-----------------SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINE 623 (791)
T ss_dssp EEEEETT-----------------TTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTT
T ss_pred EEEEecC-----------------CCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCC
Confidence 6666652 233444444556788888854433323332 223455677643 33444555678
Q ss_pred eEEEEeCCCCccceeec
Q psy226 357 TLRVWDTANKRNMKTLE 373 (406)
Q Consensus 357 ~i~vwd~~~~~~~~~l~ 373 (406)
.|...|..+++.+..+.
T Consensus 624 ~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 624 AIFSANRLTGSDVNLLA 640 (791)
T ss_dssp EEEEEETTTCCCCEEEE
T ss_pred EEEEEeCCCCcceEEee
Confidence 88888887776665553
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.27 E-value=0.0038 Score=61.46 Aligned_cols=297 Identities=11% Similarity=0.039 Sum_probs=161.9
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeC--CCcEEEEeCCCCeEE
Q psy226 107 SPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSA--DMSLKLWDMSTYQCL 183 (406)
Q Consensus 107 ~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~--d~~i~vwd~~~~~~~ 183 (406)
.....+++.+.+. ++++-...+.|.+.+.........+........+|+++|.+..|+.... .+.|...++......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 4577899998654 5556667889999998765544444345566789999997666655543 356666676543222
Q ss_pred EEEecCCcceEEEEEecCCCEEEEEe-CCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCC
Q psy226 184 KTMQGHDHNVTGVAFLPNSDFVLSAS-RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262 (406)
Q Consensus 184 ~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~ 262 (406)
......-....++++.++++.|+.+. ..+.|...|+..........+.......+++..+ .++++-...+.|...|..
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~ 242 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKY 242 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESS
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECC
Confidence 22222334568999999777666554 4567888888654332222212222345677655 555565567889999987
Q ss_pred CccceeEEecCCceEEEEE-eCCC----CCcc---------ccccccC--------CCCC-----------CCCCCEEEE
Q psy226 263 TKETKAELRGHDHTVECVA-WAPG----VASE---------SISEAAG--------RPPG-----------QGGGPYLAT 309 (406)
Q Consensus 263 ~~~~~~~~~~~~~~v~~~~-~~~~----~~~~---------~~~~~~~--------~~~~-----------~~~~~~l~s 309 (406)
+++....+.........++ ++|. .... .++.... .+.+ .....+|+.
T Consensus 243 tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~ 322 (619)
T 3s94_A 243 TGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLL 322 (619)
T ss_dssp SCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEE
T ss_pred CCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEE
Confidence 7655444332221112222 2221 0000 0000000 0000 011234554
Q ss_pred EeCCCcEEEEECCCCeEE-EEEe-CCCcCEEEEEEcCCCCEEEEE-eCCCeEEEEeCCCCccceeeccccceEEEEEEeC
Q psy226 310 GSRDKTIKLWDVGSGSLL-FTLI-GHDNWVRGVTFHPGGKYLVSC-GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR 386 (406)
Q Consensus 310 ~~~d~~i~lwd~~~~~~~-~~~~-~h~~~v~~l~~s~~g~~l~sg-s~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~ 386 (406)
+. .+.|+..++...... ..+. ..-..+.+++|++.+..|+.+ ...+.|+.++.........+...-.....|++++
T Consensus 323 ~~-~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~ 401 (619)
T 3s94_A 323 AR-RTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDW 401 (619)
T ss_dssp EE-SSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET
T ss_pred Ec-ccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEec
Confidence 44 456777777654211 1111 122457889999866555544 4578999999875433222332223466888886
Q ss_pred CCC-EEEEeeCCCeEEEeec
Q psy226 387 AHP-YVVTGSVDKTVKVWEC 405 (406)
Q Consensus 387 ~~~-~l~sgs~Dg~v~iw~~ 405 (406)
.+. +..+-+..+.|.+.++
T Consensus 402 ~~~~lY~tD~~~~~I~v~~~ 421 (619)
T 3s94_A 402 VARNLYWTDTGTDRIEVTRL 421 (619)
T ss_dssp TTTEEEEEETTTTEEEEEET
T ss_pred ccCcEEEEeCCCCcEEEEeC
Confidence 444 4455556667776653
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.20 E-value=0.002 Score=65.14 Aligned_cols=163 Identities=12% Similarity=0.043 Sum_probs=104.7
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCC----cEEEEecccccCeeeEEECCCCCEEEE-EeCCCcEEEEeCCC
Q psy226 106 RSPVIKVIFHPVFS-LMASCSEDATIRLWDYETG----EYERALHGHLDSVQDIAFDQSGKLLVS-CSADMSLKLWDMST 179 (406)
Q Consensus 106 ~~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~----~~~~~~~~h~~~V~~l~~~~~g~~l~s-gs~d~~i~vwd~~~ 179 (406)
...+..++|++... ++++-...+.|+.+++... .....+.........|++.+.+..|+. -...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 34567889988544 5556566778888887753 223334434556778999887765554 45568899999875
Q ss_pred CeEEEEEecCCcceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEE-eCCCeE
Q psy226 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASC-SNDHTA 256 (406)
Q Consensus 180 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~v 256 (406)
......+...-....+|++.|.+.+|+.... .+.|...++........+...-.+.+.|++++.+..|+.+ ...+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 5433333334456789999998776666543 2678888876544433444444678899999766555444 456789
Q ss_pred EEEeCCCcccee
Q psy226 257 RVWSLATKETKA 268 (406)
Q Consensus 257 ~vwd~~~~~~~~ 268 (406)
..+++.......
T Consensus 583 ~~~d~dG~~~~~ 594 (791)
T 3m0c_C 583 SSIDVNGGNRKT 594 (791)
T ss_dssp EEEETTSCSCEE
T ss_pred EEEecCCCceEE
Confidence 999986544433
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.16 E-value=0.0057 Score=60.33 Aligned_cols=227 Identities=9% Similarity=-0.038 Sum_probs=136.8
Q ss_pred CCCcEEEEEcCCCcEEEEec-ccccCeeeEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCC
Q psy226 126 EDATIRLWDYETGEYERALH-GHLDSVQDIAFDQSGKLLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203 (406)
Q Consensus 126 ~dg~v~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~g~~l~sg-s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 203 (406)
....|+..|+.+......+. .....+..|+|++.+..|+.+ ..++.|..+++........+........++++.+.++
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 44677888887665444333 233567899999876666554 4578899998875433333332224567899987766
Q ss_pred EEEE-EeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEe--CCCeEEEEeCCCccceeEEecCCceEEEE
Q psy226 204 FVLS-ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS--NDHTARVWSLATKETKAELRGHDHTVECV 280 (406)
Q Consensus 204 ~l~s-~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~v~~~ 280 (406)
.|+. -...+.|.+.++........+...-...+.|+++|....|.-.. ..+.|...++......... ........+
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceE
Confidence 5544 44567889998865443333334445578999998544444433 3567877877654433222 223344566
Q ss_pred EeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy226 281 AWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRV 360 (406)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~v 360 (406)
++.+. .+.+.++-...+.|..+|+..... ..+........++++.. +..+++-...+.|..
T Consensus 172 alD~~-----------------~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 172 TIDYA-----------------KRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIER 232 (628)
T ss_dssp EEETT-----------------TTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEccc-----------------cCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEE
Confidence 66652 233444445567888888865433 22333334466788765 444455556789999
Q ss_pred EeCCCCccceee
Q psy226 361 WDTANKRNMKTL 372 (406)
Q Consensus 361 wd~~~~~~~~~l 372 (406)
.|..+++....+
T Consensus 233 ~dk~tg~~~~~l 244 (628)
T 4a0p_A 233 ANKTSGQNRTII 244 (628)
T ss_dssp EETTTCCSCEEE
T ss_pred EECCCCCceEEE
Confidence 998777655444
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.12 E-value=0.00087 Score=60.21 Aligned_cols=193 Identities=11% Similarity=0.242 Sum_probs=121.9
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECC----CCCE--EEEEe--C--CCcEEEEeC--CCCeEEE
Q psy226 117 VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ----SGKL--LVSCS--A--DMSLKLWDM--STYQCLK 184 (406)
Q Consensus 117 ~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~----~g~~--l~sgs--~--d~~i~vwd~--~~~~~~~ 184 (406)
..+++++....+-+.+||+ +|+.+..+.. +.++.+..-| .|+. ++.++ . +.+|.+|++ .+.+ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456777778889999999 7888877764 4566665544 2322 33333 3 578999966 3433 44
Q ss_pred EEec------CC-cceEEEEE--ecC-CC-EEEEEeCCCcEEEEEcC-------CCeEEEEeecCCccEEEEEECCCCCE
Q psy226 185 TMQG------HD-HNVTGVAF--LPN-SD-FVLSASRDKTIKMWEVA-------TGYCVKTLTGHREWVRQIKVSPDGTL 246 (406)
Q Consensus 185 ~~~~------h~-~~v~~~~~--~p~-~~-~l~s~s~d~~i~iwd~~-------~~~~~~~~~~~~~~v~~l~~~~~~~~ 246 (406)
.+.. .. ..+..+++ +|. +. ++++...+|.+..|++. +++.++++... ..+..+..++....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCe
Confidence 4421 11 45667777 664 43 68888889999999982 33556676654 45778888998889
Q ss_pred EEEEeCCCeEEEEeCCC-----ccceeEEe-cC-CceEEEEEeCCCCCccccccccCCCCCCCCCC-EEEEEe-CCCcEE
Q psy226 247 LASCSNDHTARVWSLAT-----KETKAELR-GH-DHTVECVAWAPGVASESISEAAGRPPGQGGGP-YLATGS-RDKTIK 317 (406)
Q Consensus 247 l~s~~~d~~v~vwd~~~-----~~~~~~~~-~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~-~d~~i~ 317 (406)
|+.+-.|..|..++.+. ...+..+. ++ ...++.++..+.. ++. ||++++ .+++..
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~----------------~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA----------------DGKGYLMASSQGNSSYA 257 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG----------------GGCEEEEEEEGGGTEEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC----------------CCCEEEEEEcCCCCEEE
Confidence 99999997766666442 22222221 11 1356666654321 122 455555 677999
Q ss_pred EEECC-CCeEEEEE
Q psy226 318 LWDVG-SGSLLFTL 330 (406)
Q Consensus 318 lwd~~-~~~~~~~~ 330 (406)
+||.. +.+.+..|
T Consensus 258 Vydr~~~~~~vg~f 271 (355)
T 3amr_A 258 IYDRQGKNKYVADF 271 (355)
T ss_dssp EEESSTTCCEEEEE
T ss_pred EEECCCCCcEEEEE
Confidence 99996 56666665
No 293
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.10 E-value=0.0021 Score=57.77 Aligned_cols=190 Identities=14% Similarity=0.258 Sum_probs=119.0
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecC----CC---EEEEEeC---CCcEEEEEc--CCCeEEEE
Q psy226 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN----SD---FVLSASR---DKTIKMWEV--ATGYCVKT 227 (406)
Q Consensus 160 g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~----~~---~l~s~s~---d~~i~iwd~--~~~~~~~~ 227 (406)
..+++.....+-+.+||+ +++.++.+.. ..+..+..-|+ ++ ++++..+ +++|.+|++ .++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345666667788999999 7888888754 45666666663 22 2333333 578999977 3433 444
Q ss_pred eec------CC-ccEEEEEE--CCC-CC-EEEEEeCCCeEEEEeCCC-------ccceeEEecCCceEEEEEeCCCCCcc
Q psy226 228 LTG------HR-EWVRQIKV--SPD-GT-LLASCSNDHTARVWSLAT-------KETKAELRGHDHTVECVAWAPGVASE 289 (406)
Q Consensus 228 ~~~------~~-~~v~~l~~--~~~-~~-~l~s~~~d~~v~vwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~ 289 (406)
+.. .. ..+..+++ +|. +. +++....+|.+..|++.. .+.+..+... ..++.++..+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd----- 189 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADD----- 189 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEET-----
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcC-----
Confidence 421 11 45566777 774 43 577788889999998832 2233444332 3455555544
Q ss_pred ccccccCCCCCCCCCCEEEEEeCCCcEEEEECC-----CCeEEEEEe-CC-CcCEEEEEE--cCCCC-EEEEEe-CCCeE
Q psy226 290 SISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG-----SGSLLFTLI-GH-DNWVRGVTF--HPGGK-YLVSCG-DDKTL 358 (406)
Q Consensus 290 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~-----~~~~~~~~~-~h-~~~v~~l~~--s~~g~-~l~sgs-~d~~i 358 (406)
....|+.+-++.-|..+|.. +++.+..+. ++ ...+..|++ .++|+ ||++.+ .+.+.
T Consensus 190 -------------~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 190 -------------EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp -------------TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred -------------CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 24578888888777777754 345555542 22 235888888 55555 666655 67799
Q ss_pred EEEeCC-CCccceee
Q psy226 359 RVWDTA-NKRNMKTL 372 (406)
Q Consensus 359 ~vwd~~-~~~~~~~l 372 (406)
.|||.. +.+.+..+
T Consensus 257 ~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 257 AIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEESSTTCCEEEEE
T ss_pred EEEECCCCCcEEEEE
Confidence 999996 55555555
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.09 E-value=1.1e-05 Score=80.98 Aligned_cols=228 Identities=10% Similarity=-0.003 Sum_probs=128.6
Q ss_pred CCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe-CCCcEEEEeCCC----CeEEEEEecCCcceEEEEEecC
Q psy226 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS-ADMSLKLWDMST----YQCLKTMQGHDHNVTGVAFLPN 201 (406)
Q Consensus 127 dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs-~d~~i~vwd~~~----~~~~~~~~~h~~~v~~~~~~p~ 201 (406)
.+.|++.++.+.++...+.. ...+..|+|++.+..|+.+. ..+.|+.+++.+ ......+........++++.+.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred ccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 45788888887766544433 34567899998776666554 457899998875 1111111111123456788755
Q ss_pred CC-EEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCE-EEEEeCC-CeEEEEeCCCccceeEEecCCceEE
Q psy226 202 SD-FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL-LASCSND-HTARVWSLATKETKAELRGHDHTVE 278 (406)
Q Consensus 202 ~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~s~~~d-~~v~vwd~~~~~~~~~~~~~~~~v~ 278 (406)
+. ++++-...+.|.+.++........+.........++++|.+.+ +++-... +.|.++++........+........
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 44 4444455678999998765444333333344677899986544 4443222 6787777754322211111112233
Q ss_pred EEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe--CCCcCEEEEEEcCCCCEEEEEeCCC
Q psy226 279 CVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGKYLVSCGDDK 356 (406)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~--~h~~~v~~l~~s~~g~~l~sgs~d~ 356 (406)
.+++.|. .+.+.++-+..+.|..+|+........+. .......+|++..+ ..+++....+
T Consensus 544 Glavd~~-----------------~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~ 605 (699)
T 1n7d_A 544 GITLDLL-----------------SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 605 (699)
T ss_dssp CEEECTT-----------------TCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTT
T ss_pred EEEEecc-----------------CCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCC
Confidence 4566552 34455555667789999985432222221 11233445666554 4445556678
Q ss_pred eEEEEeCCCCccceeec
Q psy226 357 TLRVWDTANKRNMKTLE 373 (406)
Q Consensus 357 ~i~vwd~~~~~~~~~l~ 373 (406)
.|..+|..+++.+..+.
T Consensus 606 ~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 606 AIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CEEEEETTTEEEEECCC
T ss_pred eEEEEEccCCCceEEee
Confidence 99999988777666664
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.0056 Score=58.04 Aligned_cols=234 Identities=13% Similarity=0.154 Sum_probs=137.6
Q ss_pred eeeEEECC-CCCEEEEEeC-CCcEEEEeCCCCeEEEEEecC---CcceEEEEE-------ecCCCEEEEEeCCC------
Q psy226 151 VQDIAFDQ-SGKLLVSCSA-DMSLKLWDMSTYQCLKTMQGH---DHNVTGVAF-------LPNSDFVLSASRDK------ 212 (406)
Q Consensus 151 V~~l~~~~-~g~~l~sgs~-d~~i~vwd~~~~~~~~~~~~h---~~~v~~~~~-------~p~~~~l~s~s~d~------ 212 (406)
...|+|+| ++..|+.+.. .+.|++.|+.++........- ......++| +++++.|+++...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 44789998 3444554443 467889998876654433321 224789999 99999777666554
Q ss_pred -cEEEEEcCC-CeEE-----EEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEeCC-------Cccc-----------
Q psy226 213 -TIKMWEVAT-GYCV-----KTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLA-------TKET----------- 266 (406)
Q Consensus 213 -~i~iwd~~~-~~~~-----~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~v~vwd~~-------~~~~----------- 266 (406)
.|.+.+... +... ..+... .....++++| ++.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 255665333 1211 122211 2345678899 55666667788899999987 3332
Q ss_pred eeEE-e-cCCceEEEEEeCCCCCccccccccCCCCCCCCCCEE-EEEeCCCcEEEEEC--CCCeE--EEEEeCC---C--
Q psy226 267 KAEL-R-GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYL-ATGSRDKTIKLWDV--GSGSL--LFTLIGH---D-- 334 (406)
Q Consensus 267 ~~~~-~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~lwd~--~~~~~--~~~~~~h---~-- 334 (406)
...+ . +.......++|+| .|.+| ++-+....|+.++. ..+.. ...+.+. .
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p------------------~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~ 361 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHP------------------TGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGY 361 (496)
T ss_dssp EEEEEECSSSSCCEEEEECT------------------TSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCC
T ss_pred cceeEecCCCCCceEEEEcC------------------CCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcc
Confidence 1111 1 1122345677777 35543 44445667888554 33322 0222221 1
Q ss_pred ----------cCEE-EEEEc-------CCCCEEEEEeCCCeEEEEeCCCCccceeeccc---------------------
Q psy226 335 ----------NWVR-GVTFH-------PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH--------------------- 375 (406)
Q Consensus 335 ----------~~v~-~l~~s-------~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h--------------------- 375 (406)
.... .++.. ++|.++++=..+++|+.++ .++ .+.++-+.
T Consensus 362 ~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~ 439 (496)
T 3kya_A 362 RDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLRE 439 (496)
T ss_dssp BCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTT
T ss_pred cCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchh
Confidence 1244 45554 5677777777788999998 345 33344221
Q ss_pred ---cceEEEEEEeCC-CCEEEEeeCCCeEEEeec
Q psy226 376 ---SHFVTSLDFHRA-HPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 376 ---~~~v~~l~~~~~-~~~l~sgs~Dg~v~iw~~ 405 (406)
-.....|+++++ +.+.++-+....|+.+++
T Consensus 440 ~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 440 VARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp TCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred hhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence 113678999997 777777777888988875
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.07 E-value=0.0062 Score=55.50 Aligned_cols=98 Identities=13% Similarity=0.151 Sum_probs=60.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE--ec---ccccCeeeEEECCC---CCEEEEEeC-C-----CcEE
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA--LH---GHLDSVQDIAFDQS---GKLLVSCSA-D-----MSLK 173 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~--~~---~h~~~V~~l~~~~~---g~~l~sgs~-d-----~~i~ 173 (406)
.-..++|.|+++++++ ..+|.|++++ +++.... +. ........|+|+|+ +..|+.+.. . ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4568999999996665 5669999998 4543211 11 12346789999998 555554433 2 5677
Q ss_pred EEeCCCCe-----E-EEEEe---cCCcceEEEEEecCCCEEEEE
Q psy226 174 LWDMSTYQ-----C-LKTMQ---GHDHNVTGVAFLPNSDFVLSA 208 (406)
Q Consensus 174 vwd~~~~~-----~-~~~~~---~h~~~v~~~~~~p~~~~l~s~ 208 (406)
.++..... . +..+. +..+....++|.|+|.+.++.
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 78776431 1 12232 112344689999999766664
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.03 E-value=0.0071 Score=54.43 Aligned_cols=228 Identities=14% Similarity=0.059 Sum_probs=120.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec---ccccCeeeEEECCCCCEEEEEeCCCcE-EEEeC-CCC
Q psy226 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH---GHLDSVQDIAFDQSGKLLVSCSADMSL-KLWDM-STY 180 (406)
Q Consensus 106 ~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~---~h~~~V~~l~~~~~g~~l~sgs~d~~i-~vwd~-~~~ 180 (406)
..++.+|.|+| +..++. +.+|.|.. ....|+-=..+. .+...+..+.+.+++..++.+ .++.| +-.|- .+.
T Consensus 79 ~~~~~~i~~~~-~~~~~~-g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW 154 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIV-GEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNW 154 (327)
T ss_dssp CCEEEEEEEET-TEEEEE-EETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESSTTSSE
T ss_pred CccEEEEEecC-CeEEEE-ECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcCCCCCC
Confidence 34688899987 444444 45664443 222233211111 233457778877777666655 45544 33331 122
Q ss_pred eEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEc--CCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Q psy226 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV--ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258 (406)
Q Consensus 181 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~v 258 (406)
+. ...++...+.++.+.|++.+++.+...+..+-+|- .+-..+ -......+..+.+.+++.++ .++.+|.+++
T Consensus 155 ~~--~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~ 229 (327)
T 2xbg_A 155 QA--LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAF 229 (327)
T ss_dssp EE--EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEE
T ss_pred EE--eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEE
Confidence 22 22345567899999998887766644333333442 111222 12345678889999998765 4556788777
Q ss_pred EeCCCccceeEEe-c---CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEe---
Q psy226 259 WSLATKETKAELR-G---HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI--- 331 (406)
Q Consensus 259 wd~~~~~~~~~~~-~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~--- 331 (406)
.+...+..-..+. . ....+..+.+.| .+.++++ +.++.| ++....|+.-..+.
T Consensus 230 s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~------------------~~~~~~~-g~~g~i-~~S~DgG~tW~~~~~~~ 289 (327)
T 2xbg_A 230 SDPDNSENWGELLSPLRRNSVGFLDLAYRT------------------PNEVWLA-GGAGAL-LCSQDGGQTWQQDVDVK 289 (327)
T ss_dssp EETTEEEEECCCBCTTSSCCSCEEEEEESS------------------SSCEEEE-ESTTCE-EEESSTTSSCEECGGGT
T ss_pred ecCCCCCeeEeccCCcccCCcceEEEEecC------------------CCEEEEE-eCCCeE-EEeCCCCcccEEcCccC
Confidence 6422121111111 1 122466666654 2334444 446666 33333343222222
Q ss_pred CCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeC
Q psy226 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363 (406)
Q Consensus 332 ~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~ 363 (406)
.....+.++.|.+++. ++.++.+|.|.-++-
T Consensus 290 ~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 290 KVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp TSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred CCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 2234577888876554 566777898877653
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.02 E-value=0.0032 Score=62.04 Aligned_cols=228 Identities=9% Similarity=0.010 Sum_probs=124.8
Q ss_pred CCcEEEEEcCCCcE-EEEecccccCeeeEEECCCCCEEEEEe-CCCcEEEEeCCCCeE-EEEEecCCcceEEEEEecCCC
Q psy226 127 DATIRLWDYETGEY-ERALHGHLDSVQDIAFDQSGKLLVSCS-ADMSLKLWDMSTYQC-LKTMQGHDHNVTGVAFLPNSD 203 (406)
Q Consensus 127 dg~v~vwd~~~~~~-~~~~~~h~~~V~~l~~~~~g~~l~sgs-~d~~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~p~~~ 203 (406)
...|+.-|+..... ...+......+..|+|++.+..|+.+. ..+.|..+++..... ...+...-....++++.+.++
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 45677777765431 122223345577899998777666554 457788888875432 222332235678999999666
Q ss_pred EEEE-EeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeC--CCeEEEEeCCCccceeEEecCCceEEEE
Q psy226 204 FVLS-ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN--DHTARVWSLATKETKAELRGHDHTVECV 280 (406)
Q Consensus 204 ~l~s-~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~~v~~~ 280 (406)
.|+. -...+.|.+.++........+...-.....|+++|.+..|..... .+.|...++..................+
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred EEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 5554 455788999998755433333344445678999997554444332 4567777765433332222223345566
Q ss_pred EeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy226 281 AWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRV 360 (406)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~v 360 (406)
++.+. .+.+.++-...+.|...|+..........+......+|++.++ ...++-...+.|..
T Consensus 177 ald~~-----------------~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~ 238 (619)
T 3s94_A 177 TLDYE-----------------EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILA 238 (619)
T ss_dssp EEETT-----------------TTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEE
T ss_pred EEEcc-----------------CCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEE
Confidence 66653 2344444455677888887543322222212222346777655 44445456788999
Q ss_pred EeCCCCccceee
Q psy226 361 WDTANKRNMKTL 372 (406)
Q Consensus 361 wd~~~~~~~~~l 372 (406)
.|..+++....+
T Consensus 239 ~d~~tg~~~~~i 250 (619)
T 3s94_A 239 CNKYTGEGLREI 250 (619)
T ss_dssp EESSSCCCCEEC
T ss_pred EECCCCcccEEE
Confidence 998777654444
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.98 E-value=0.0095 Score=54.24 Aligned_cols=100 Identities=15% Similarity=0.237 Sum_probs=60.8
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeE--EEEEe---cCCcceEEEEEecC---CCEEEEEeC-C-----CcE
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQ---GHDHNVTGVAFLPN---SDFVLSASR-D-----KTI 214 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~--~~~~~---~h~~~v~~~~~~p~---~~~l~s~s~-d-----~~i 214 (406)
.....++|.|+|+++++ ..++.|.+++ +++. +..+. ........++|+|+ +..|+.+.. . ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34678999999985554 5679999998 3332 11111 11346789999998 555544433 2 567
Q ss_pred EEEEcCCCe-----EE-EEee---cCCccEEEEEECCCCCEEEEEe
Q psy226 215 KMWEVATGY-----CV-KTLT---GHREWVRQIKVSPDGTLLASCS 251 (406)
Q Consensus 215 ~iwd~~~~~-----~~-~~~~---~~~~~v~~l~~~~~~~~l~s~~ 251 (406)
..++...+. .+ ..+. +.......++|.|+|.+.++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 777776431 11 1132 1112346799999998777654
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.97 E-value=0.00094 Score=59.48 Aligned_cols=164 Identities=10% Similarity=0.137 Sum_probs=110.0
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCcEEEE-ecc----cc--cCeeeEEE---CCCCCEEEEEe
Q psy226 99 KFALSGHRSPVIKVIFHPVFSLMASCS-EDATIRLWDYETGEYERA-LHG----HL--DSVQDIAF---DQSGKLLVSCS 167 (406)
Q Consensus 99 ~~~l~~h~~~V~~v~~~p~~~~latgs-~dg~v~vwd~~~~~~~~~-~~~----h~--~~V~~l~~---~~~g~~l~sgs 167 (406)
.+.+.+...--.+++|++....+..++ ..|+|..||..++..... +.+ .. ..+..|.| .|+++++++..
T Consensus 5 ~i~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~ 84 (334)
T 2p9w_A 5 QIDVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMK 84 (334)
T ss_dssp EEEECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEE
T ss_pred eEEecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEc
Confidence 344444444455789998666665555 799999999986654433 222 11 13578999 68877777543
Q ss_pred -------------CCCcEEEEeCC---CCeEEEEEe--cCC-----------cceEEEEEecCCCEEEEEeCC-CcEEEE
Q psy226 168 -------------ADMSLKLWDMS---TYQCLKTMQ--GHD-----------HNVTGVAFLPNSDFVLSASRD-KTIKMW 217 (406)
Q Consensus 168 -------------~d~~i~vwd~~---~~~~~~~~~--~h~-----------~~v~~~~~~p~~~~l~s~s~d-~~i~iw 217 (406)
.+..+..+|+. +++.+.... ... .....++..++|+..++++.- +.|...
T Consensus 85 ~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV 164 (334)
T 2p9w_A 85 NAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARV 164 (334)
T ss_dssp ETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEE
T ss_pred ccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEE
Confidence 26779999998 676554433 111 247889999999998888887 776666
Q ss_pred EcCCCeEEEEee--c----CCccEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Q psy226 218 EVATGYCVKTLT--G----HREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263 (406)
Q Consensus 218 d~~~~~~~~~~~--~----~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~ 263 (406)
+.... .+..+. . .....+.|++.|+|++|++...+|.+..+|+..
T Consensus 165 ~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 165 SADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 65432 222221 1 112256899999999888887799999999874
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.94 E-value=4e-05 Score=76.81 Aligned_cols=216 Identities=12% Similarity=0.023 Sum_probs=120.3
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCcEEEEEcCC----CcEEEEecccccCeeeEEECCCCC-EEEEEeCCCcEEEEeCCCCe
Q psy226 108 PVIKVIFHPVFSLMA-SCSEDATIRLWDYET----GEYERALHGHLDSVQDIAFDQSGK-LLVSCSADMSLKLWDMSTYQ 181 (406)
Q Consensus 108 ~V~~v~~~p~~~~la-tgs~dg~v~vwd~~~----~~~~~~~~~h~~~V~~l~~~~~g~-~l~sgs~d~~i~vwd~~~~~ 181 (406)
.+..++|++....|+ +-...+.|+.+++.+ ......+.........|++.+.+. +.++-...+.|.+.++....
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCc
Confidence 456788998766555 445567899998875 222222222223456788886544 44444556889999987544
Q ss_pred EEEEEecCCcceEEEEEecCCCEEEEEeC-C-CcEEEEEcCCCeEEEEeecCCccEEEEEECCCC-CEEEEEeCCCeEEE
Q psy226 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASR-D-KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARV 258 (406)
Q Consensus 182 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-d-~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~v~v 258 (406)
....+.........+++.|.+.+|+.+.. . +.|...++........+...-.+.+.|+++|++ .++++-+..+.|.+
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 33222222344577889987665555432 2 677777764322222222233456789999875 45556566788999
Q ss_pred EeCCCccceeEEecCC--ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCcC
Q psy226 259 WSLATKETKAELRGHD--HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336 (406)
Q Consensus 259 wd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~~ 336 (406)
+++........+.... .....+++. .+.++++....+.|..+|..+|+.+..+......
T Consensus 567 ~d~dG~~~~~~~~~~~~~~~P~glavd-------------------~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~ 627 (699)
T 1n7d_A 567 IDVNGGNRKTILEDEKRLAHPFSLAVF-------------------EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLS 627 (699)
T ss_dssp ECSSSSCCEEECCCSSSCSSCCCCEEE-------------------TTEEEEECSTTTCEEEEETTTEEEEECCCTTCSS
T ss_pred EccCCCceEEEEecCCcCCCceEeEEE-------------------CCEEEEEeCCCCeEEEEEccCCCceEEeecCCCC
Confidence 9986433222111100 000011111 1345555566788999998888877666433323
Q ss_pred EEEEEE
Q psy226 337 VRGVTF 342 (406)
Q Consensus 337 v~~l~~ 342 (406)
...|++
T Consensus 628 P~~i~v 633 (699)
T 1n7d_A 628 PEDMVL 633 (699)
T ss_dssp CCCCCB
T ss_pred CcEEEE
Confidence 344433
No 302
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.92 E-value=0.0085 Score=53.36 Aligned_cols=196 Identities=9% Similarity=0.080 Sum_probs=116.6
Q ss_pred CcceEEEEEecCCCEEEEEe-CCCcEEEEEcCCCeEEEEeecC-------CccEEEEEE---CCCCCEEEEEe-------
Q psy226 190 DHNVTGVAFLPNSDFVLSAS-RDKTIKMWEVATGYCVKTLTGH-------REWVRQIKV---SPDGTLLASCS------- 251 (406)
Q Consensus 190 ~~~v~~~~~~p~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~~-------~~~v~~l~~---~~~~~~l~s~~------- 251 (406)
...-.+++|++....+..++ ..++|..||...+......... ...+..|.+ .|+++++++..
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 33445788988767666666 7899999998765433332221 113578999 68887777543
Q ss_pred ------CCCeEEEEeCC---CccceeEEe--cC-----------CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE
Q psy226 252 ------NDHTARVWSLA---TKETKAELR--GH-----------DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT 309 (406)
Q Consensus 252 ------~d~~v~vwd~~---~~~~~~~~~--~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 309 (406)
.+..|..+|+. +++.+.... .. ......++..+ .|...++
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~------------------~GnaYVt 153 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR------------------DGNSYVA 153 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT------------------TSCEEEE
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC------------------CCCEEEe
Confidence 26789999998 665543322 11 12355566554 4666677
Q ss_pred EeCC-CcEEEEECCCCeEEEEEeC-----CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcc--ceee-ccc---cc
Q psy226 310 GSRD-KTIKLWDVGSGSLLFTLIG-----HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN--MKTL-EAH---SH 377 (406)
Q Consensus 310 ~~~d-~~i~lwd~~~~~~~~~~~~-----h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~--~~~l-~~h---~~ 377 (406)
++.- +.|...+........-+.. .....+.++++|+|+.|++...+|.+..+|+.+... +..- .+. -.
T Consensus 154 ~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~ 233 (334)
T 2p9w_A 154 FALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLS 233 (334)
T ss_dssp EEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCT
T ss_pred CCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCccccc
Confidence 7766 7766666543322211111 112356899999999988887799999999875433 2110 011 11
Q ss_pred eEEE-EEEeCCCCE-EEEeeCCCeEEEe
Q psy226 378 FVTS-LDFHRAHPY-VVTGSVDKTVKVW 403 (406)
Q Consensus 378 ~v~~-l~~~~~~~~-l~sgs~Dg~v~iw 403 (406)
.... +.--.+|+. |++.+..+.+.+.
T Consensus 234 ~~dgilp~~~~G~vllV~~~~~~~~~l~ 261 (334)
T 2p9w_A 234 GTEKIVTVPVGNESVLVGARAPYAISFR 261 (334)
T ss_dssp TEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CcccccccccCCEEEEEEcCCCCEEEEE
Confidence 1233 344456766 5555556655543
No 303
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.83 E-value=0.017 Score=56.89 Aligned_cols=159 Identities=11% Similarity=-0.007 Sum_probs=104.5
Q ss_pred CCeEEEEEcCCCCE-EEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEE-eCCCcEEEEeCCCCeEEE
Q psy226 107 SPVIKVIFHPVFSL-MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSC-SADMSLKLWDMSTYQCLK 184 (406)
Q Consensus 107 ~~V~~v~~~p~~~~-latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sg-s~d~~i~vwd~~~~~~~~ 184 (406)
..+..++|++.... +++-..++.|..++.........+.........|++++.+..|+.+ ...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 45778999987555 4565667899999987765555454334567789998766655544 456789999986543222
Q ss_pred EEecCCcceEEEEEecCCCEEEEEeC--CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEE-EEeCCCeEEEEeC
Q psy226 185 TMQGHDHNVTGVAFLPNSDFVLSASR--DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLA-SCSNDHTARVWSL 261 (406)
Q Consensus 185 ~~~~h~~~v~~~~~~p~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~v~vwd~ 261 (406)
.+...-....++++.|....|+.... .+.|...++.... ...+...-.+...|++++++..|. +=...+.|..+|+
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 22233345689999997666666553 4567777765433 333333456778999999766554 4456788999998
Q ss_pred CCccc
Q psy226 262 ATKET 266 (406)
Q Consensus 262 ~~~~~ 266 (406)
.....
T Consensus 196 dG~~~ 200 (628)
T 4a0p_A 196 LGLNR 200 (628)
T ss_dssp TSCSC
T ss_pred CCCce
Confidence 65433
No 304
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.62 E-value=0.0045 Score=54.81 Aligned_cols=213 Identities=12% Similarity=0.151 Sum_probs=103.2
Q ss_pred CcEEEEEcCCCcEEEEec--ccccCeeeEEECCCCCEEEEEeCC-----CcEEEEeCCCCe-----EEEEEecCCcceEE
Q psy226 128 ATIRLWDYETGEYERALH--GHLDSVQDIAFDQSGKLLVSCSAD-----MSLKLWDMSTYQ-----CLKTMQGHDHNVTG 195 (406)
Q Consensus 128 g~v~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~g~~l~sgs~d-----~~i~vwd~~~~~-----~~~~~~~h~~~v~~ 195 (406)
..+.+||..+++....-. .....-..+. .++.+++.|+.+ ..+.+||..+.+ .+..+.........
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~ 108 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGA 108 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeE
Confidence 468889988876544221 1111111222 256677777754 468899987654 22222211122222
Q ss_pred EEEecCCCEEEEEeCC-----CcEEEEEcCCCeEEEE--eecCCccEEEEEECCCCCEEEEEeCC-----CeEEEEeCCC
Q psy226 196 VAFLPNSDFVLSASRD-----KTIKMWEVATGYCVKT--LTGHREWVRQIKVSPDGTLLASCSND-----HTARVWSLAT 263 (406)
Q Consensus 196 ~~~~p~~~~l~s~s~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~d-----~~v~vwd~~~ 263 (406)
+.+ ++..++.|+.+ ..+.+||..+..-... +.........+.+ ++++++.|+.+ ..+.+||+.+
T Consensus 109 ~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 109 TTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp EEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCC
Confidence 222 56666666654 3578889877653322 2111111122222 56677777654 3477777765
Q ss_pred ccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcC
Q psy226 264 KETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD-----KTIKLWDVGSGSLLFT--LIGHDNW 336 (406)
Q Consensus 264 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~~--~~~h~~~ 336 (406)
..=. .+.. .|...... .. ...++.+++.|+.+ ..+.+||+.+.+-... +......
T Consensus 185 ~~W~-~~~~----------~p~~r~~~-~~------~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~ 246 (301)
T 2vpj_A 185 GHWT-NVTP----------MATKRSGA-GV------ALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCY 246 (301)
T ss_dssp TEEE-EECC----------CSSCCBSC-EE------EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS
T ss_pred CcEE-eCCC----------CCcccccc-eE------EEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccc
Confidence 3211 1100 00000000 00 00134566666654 4689999987653221 1111111
Q ss_pred EEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCC
Q psy226 337 VRGVTFHPGGKYLVSCGDD-----KTLRVWDTANK 366 (406)
Q Consensus 337 v~~l~~s~~g~~l~sgs~d-----~~i~vwd~~~~ 366 (406)
...+.+ +++.++.|+.+ ..|.+||..+.
T Consensus 247 ~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 247 VGATVL--RGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp CEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred eeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 222332 56677777654 45778887654
No 305
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.60 E-value=0.04 Score=50.11 Aligned_cols=227 Identities=14% Similarity=0.136 Sum_probs=118.5
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe-EEEEEe---cCCcceEEEEEecC---CCEEEEEeC----C----Cc
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ-CLKTMQ---GHDHNVTGVAFLPN---SDFVLSASR----D----KT 213 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~-~~~~~~---~h~~~v~~~~~~p~---~~~l~s~s~----d----~~ 213 (406)
.....++|.|+|++++ +..++.|+++|. +++ .+..+. ........++++|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4567899999997554 566699999974 444 222211 12345789999997 455544332 3 56
Q ss_pred EEEEEcCCC-------eEE-EEeec-CCccEEEEEECCCCCEEEEEeCC-------------CeEEEEeCCCc-------
Q psy226 214 IKMWEVATG-------YCV-KTLTG-HREWVRQIKVSPDGTLLASCSND-------------HTARVWSLATK------- 264 (406)
Q Consensus 214 i~iwd~~~~-------~~~-~~~~~-~~~~v~~l~~~~~~~~l~s~~~d-------------~~v~vwd~~~~------- 264 (406)
|..|+...+ +.+ ..+.. .......++|.|||.+.++.+.. |.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777776543 111 11221 11234679999999877775432 34555544321
Q ss_pred -cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC-CC--cEEEEEC--------CC--------C
Q psy226 265 -ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR-DK--TIKLWDV--------GS--------G 324 (406)
Q Consensus 265 -~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~-d~--~i~lwd~--------~~--------~ 324 (406)
.......++. ....++|.|. .+.++++-.. ++ .|.+... .. .
T Consensus 187 ~~~~i~a~G~r-np~Gla~d~~-----------------~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~ 248 (354)
T 3a9g_A 187 PNSPIWSYGHR-NPQGIDWHRA-----------------SGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFV 248 (354)
T ss_dssp TTCCEEEECCS-CCCEEEECTT-----------------TCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSC
T ss_pred CCCcEEEEccC-CcceEEEeCC-----------------CCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCc
Confidence 0011111222 1234555552 1222222111 11 1221110 00 0
Q ss_pred eEEEEEeCCCcCEEEEEEc-------CCCCEEEEEeCCCeEEEEeCCCC-ccc--eee-ccccceEEEEEEeCCCCEEEE
Q psy226 325 SLLFTLIGHDNWVRGVTFH-------PGGKYLVSCGDDKTLRVWDTANK-RNM--KTL-EAHSHFVTSLDFHRAHPYVVT 393 (406)
Q Consensus 325 ~~~~~~~~h~~~v~~l~~s-------~~g~~l~sgs~d~~i~vwd~~~~-~~~--~~l-~~h~~~v~~l~~~~~~~~l~s 393 (406)
.++..+.........++|. .+|.++++.-..+.|...++... +.. ..+ ......+..+++.|+|.+.++
T Consensus 249 ~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~ 328 (354)
T 3a9g_A 249 DPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIS 328 (354)
T ss_dssp CCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEE
T ss_pred CCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEE
Confidence 1222221112357788883 56777777777788888887743 221 222 222346899999999987776
Q ss_pred ee
Q psy226 394 GS 395 (406)
Q Consensus 394 gs 395 (406)
..
T Consensus 329 ~~ 330 (354)
T 3a9g_A 329 TS 330 (354)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 306
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.54 E-value=0.049 Score=49.53 Aligned_cols=232 Identities=11% Similarity=0.073 Sum_probs=120.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCc-EEEEec---ccccCeeeEEECCC---CCEEEEEeC----C----Cc
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGE-YERALH---GHLDSVQDIAFDQS---GKLLVSCSA----D----MS 171 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~-~~~~~~---~h~~~V~~l~~~~~---g~~l~sgs~----d----~~ 171 (406)
.....++|.|+++++++ ..+|.|+++| .+++ ....+. ........|+++|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 44678999999986655 5569999997 4554 111111 12345789999997 455544433 3 56
Q ss_pred EEEEeCCCC-------eEE-EEEe-cCCcceEEEEEecCCCEEEEEeC-------------CCcEEEEEcCCC-------
Q psy226 172 LKLWDMSTY-------QCL-KTMQ-GHDHNVTGVAFLPNSDFVLSASR-------------DKTIKMWEVATG------- 222 (406)
Q Consensus 172 i~vwd~~~~-------~~~-~~~~-~h~~~v~~~~~~p~~~~l~s~s~-------------d~~i~iwd~~~~------- 222 (406)
|..|+.... +.+ ..+. +..+....++|.|+|.+.++-+. .+.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf 186 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPF 186 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCC
Confidence 777776543 111 1122 12234567999999987666432 134444444321
Q ss_pred --eEEEEeecCCccEEEEEECC-CCCEEEEEeCCCe---EEEEeCCC--------c--------cceeEEecCCceEEEE
Q psy226 223 --YCVKTLTGHREWVRQIKVSP-DGTLLASCSNDHT---ARVWSLAT--------K--------ETKAELRGHDHTVECV 280 (406)
Q Consensus 223 --~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~---v~vwd~~~--------~--------~~~~~~~~~~~~v~~~ 280 (406)
..+. ..++.. ...++|+| +|.++++-...+. |.+..-.. . .+...+.........+
T Consensus 187 ~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~ 264 (354)
T 3a9g_A 187 PNSPIW-SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGA 264 (354)
T ss_dssp TTCCEE-EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEE
T ss_pred CCCcEE-EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcce
Confidence 0111 123432 45789999 6766655433221 33222100 0 0111110001123333
Q ss_pred EeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCC-eEE--EEEe-CCCcCEEEEEEcCCCCEEEEEe
Q psy226 281 AWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG-SLL--FTLI-GHDNWVRGVTFHPGGKYLVSCG 353 (406)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~-~~~--~~~~-~h~~~v~~l~~s~~g~~l~sgs 353 (406)
++..+... ....|.++++....+.|...++... ... ..+. +-...+..+++.|+|...++..
T Consensus 265 ~~y~g~~f-----------p~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 265 SFVHGDMF-----------PGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EECCSSSC-----------GGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEECCCCC-----------cccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 43322110 1124566666666777888887643 322 2332 2245688999999997666654
No 307
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=97.49 E-value=0.0003 Score=48.87 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHhcChHHHHHHHHhhcCCChh
Q psy226 8 REELNKAVADYLLSNGYLSALEGFKKDADLPAE 40 (406)
Q Consensus 8 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 40 (406)
.+|+|.+|+|||+|+||.+++.+|+.|+.+++.
T Consensus 5 sdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~ 37 (90)
T 2xtc_A 5 SDEVNFLVYRYLQESGFSHSAFTFGIESHISQS 37 (90)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGS
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCcc
Confidence 689999999999999999999999999887654
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.44 E-value=0.015 Score=51.37 Aligned_cols=212 Identities=13% Similarity=0.183 Sum_probs=100.7
Q ss_pred CcEEEEEcCCCcEEEEe--cccccCeeeEEECCCCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EecCCcceEEEEE
Q psy226 128 ATIRLWDYETGEYERAL--HGHLDSVQDIAFDQSGKLLVSCSAD-----MSLKLWDMSTYQCLKT--MQGHDHNVTGVAF 198 (406)
Q Consensus 128 g~v~vwd~~~~~~~~~~--~~h~~~V~~l~~~~~g~~l~sgs~d-----~~i~vwd~~~~~~~~~--~~~h~~~v~~~~~ 198 (406)
..+..||..+.+....- ......-..+.+ ++.+++.|+.+ ..+.+||..+.+.... +.........+.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEE--CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE
Confidence 35788898887654431 111111112222 56677777654 3588899877653221 1111111222222
Q ss_pred ecCCCEEEEEeCCC-----cEEEEEcCCCeEEEE--eecCCccEEEEEECCCCCEEEEEeCC-------CeEEEEeCCCc
Q psy226 199 LPNSDFVLSASRDK-----TIKMWEVATGYCVKT--LTGHREWVRQIKVSPDGTLLASCSND-------HTARVWSLATK 264 (406)
Q Consensus 199 ~p~~~~l~s~s~d~-----~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~d-------~~v~vwd~~~~ 264 (406)
++..++.|+.++ .+.+||..+..-... +.........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 108 --~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 108 --NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp --TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred --CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 566667776553 477888877643322 1111111122222 55666666542 34677777653
Q ss_pred ccee--EEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCc
Q psy226 265 ETKA--ELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD-----KTIKLWDVGSGSLLFT--LIGHDN 335 (406)
Q Consensus 265 ~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~~--~~~h~~ 335 (406)
.=.. .+.........+. .++.+++.|+.+ +.+.+||+.+.+=... +.....
T Consensus 184 ~W~~~~~~p~~r~~~~~~~--------------------~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 184 EWTYIAEMSTRRSGAGVGV--------------------LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR 243 (302)
T ss_dssp EEEEECCCSSCCBSCEEEE--------------------ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred cEEECCCCccccccccEEE--------------------ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc
Confidence 2111 0000000000000 134566666654 3688999877643221 111111
Q ss_pred CEEEEEEcCCCCEEEEEeCCC-----eEEEEeCCCCc
Q psy226 336 WVRGVTFHPGGKYLVSCGDDK-----TLRVWDTANKR 367 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d~-----~i~vwd~~~~~ 367 (406)
....+.+ +++.++.|+.++ .+.+||..+.+
T Consensus 244 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 244 NAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred cCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 1122222 567777777553 47888887643
No 309
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.43 E-value=0.067 Score=48.55 Aligned_cols=237 Identities=11% Similarity=0.103 Sum_probs=118.3
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCcEEEEec-------ccccCeeeEEECCC---CCEEEEEe-C------
Q psy226 107 SPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALH-------GHLDSVQDIAFDQS---GKLLVSCS-A------ 168 (406)
Q Consensus 107 ~~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~~~~~~~-------~h~~~V~~l~~~~~---g~~l~sgs-~------ 168 (406)
.....++|.|+++ +++ +...|.|++++. ++.....+. ........|+|+|+ +..|..+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3457899999999 555 456799999985 333221111 11235678999996 44454442 2
Q ss_pred -CCcEEEEeCCCC--e--EEEE-Eec------CCcceEEEEEecCCCEEEEEeC-------------CCcEEEEEcCCCe
Q psy226 169 -DMSLKLWDMSTY--Q--CLKT-MQG------HDHNVTGVAFLPNSDFVLSASR-------------DKTIKMWEVATGY 223 (406)
Q Consensus 169 -d~~i~vwd~~~~--~--~~~~-~~~------h~~~v~~~~~~p~~~~l~s~s~-------------d~~i~iwd~~~~~ 223 (406)
...|..|++... . .... +.+ ..+.-..+.|.|+|.+.++-+. .+.|.-+|.....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 224666665432 1 1111 111 1233467999999965555332 1345555543210
Q ss_pred ------------EEEEe-ecCCccEEEEEECC-CCCEEEEEeC-CCeEEEEeCCCccc----------------------
Q psy226 224 ------------CVKTL-TGHREWVRQIKVSP-DGTLLASCSN-DHTARVWSLATKET---------------------- 266 (406)
Q Consensus 224 ------------~~~~~-~~~~~~v~~l~~~~-~~~~l~s~~~-d~~v~vwd~~~~~~---------------------- 266 (406)
....+ .+++ ....++|+| +|.++++-.. ++.=.|.-+..+..
T Consensus 176 p~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 11111 2333 356789999 5655554322 22122222211100
Q ss_pred ---------eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEE--Ee-CCC
Q psy226 267 ---------KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFT--LI-GHD 334 (406)
Q Consensus 267 ---------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~--~~-~h~ 334 (406)
...+..| .....+.+..+.. .....+.++++....+.|...++..++.+.. +. +..
T Consensus 255 ~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~-----------fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 322 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDS-PAVSGMAFYNSDK-----------FPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRG 322 (353)
T ss_dssp SSCTTSCCCSEEESSC-CCEEEEEEECCSS-----------SGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGC
T ss_pred CCCCCccCCeEEeCCC-cCcceeEEECCcc-----------CcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCC
Confidence 0000001 1122222222110 0012466777666777777777766544322 22 223
Q ss_pred cCEEEEEEcCCCCEEEEEe-CCCeE
Q psy226 335 NWVRGVTFHPGGKYLVSCG-DDKTL 358 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs-~d~~i 358 (406)
..+..+++.|+|...++.. .+|.|
T Consensus 323 ~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 323 QRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CCEEEEEECTTSCEEEEECSTTEEE
T ss_pred CceeEEEECCCCcEEEEEeCCCCEE
Confidence 4689999999998666533 34544
No 310
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.36 E-value=0.024 Score=50.12 Aligned_cols=219 Identities=10% Similarity=0.104 Sum_probs=107.5
Q ss_pred EEEEEeC--CCcEEEEEcCCCcEEEEec--ccccCeeeEEECCCCCEEEEEeCC----CcEEEEeCCCCeEEEE--EecC
Q psy226 120 LMASCSE--DATIRLWDYETGEYERALH--GHLDSVQDIAFDQSGKLLVSCSAD----MSLKLWDMSTYQCLKT--MQGH 189 (406)
Q Consensus 120 ~latgs~--dg~v~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~g~~l~sgs~d----~~i~vwd~~~~~~~~~--~~~h 189 (406)
+++.|+. ...+.+||..+++....-. .....-..+.+ ++.+++.|+.+ ..+.+||..+.+.... +...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4445544 3578899988877553311 11111122222 56677777754 5688899887653322 2111
Q ss_pred CcceEEEEEecCCCEEEEEeCC------CcEEEEEcCCCeEEEE--eecCCccEEEEEECCCCCEEEEEeC---------
Q psy226 190 DHNVTGVAFLPNSDFVLSASRD------KTIKMWEVATGYCVKT--LTGHREWVRQIKVSPDGTLLASCSN--------- 252 (406)
Q Consensus 190 ~~~v~~~~~~p~~~~l~s~s~d------~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~--------- 252 (406)
......+.+ ++.+++.|+.+ ..+.+||..+..-... +.........+.+ ++++++.|+.
T Consensus 92 r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 92 RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEE
T ss_pred ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccc
Confidence 111222222 56667777765 4588899887653322 1111111122222 5566666653
Q ss_pred CCeEEEEeCCCccceeEEecCC---ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC-----CcEEEEECCCC
Q psy226 253 DHTARVWSLATKETKAELRGHD---HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD-----KTIKLWDVGSG 324 (406)
Q Consensus 253 d~~v~vwd~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~lwd~~~~ 324 (406)
-..+.+||+.+..=. .+.... ..-..+. .++.+++.|+.+ ..+.+||+.+.
T Consensus 168 ~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~--------------------~~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 168 LNSCEVYDPATETWT-ELCPMIEARKNHGLVF--------------------VKDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp CCCEEEEETTTTEEE-EECCCSSCCBSCEEEE--------------------ETTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred cceEEEeCCCCCeEE-ECCCccchhhcceEEE--------------------ECCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 234777777654211 111000 0000000 024456665543 35888998775
Q ss_pred eEEE--EEeCCCcCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCc
Q psy226 325 SLLF--TLIGHDNWVRGVTFHPGGKYLVSCGDD-----KTLRVWDTANKR 367 (406)
Q Consensus 325 ~~~~--~~~~h~~~v~~l~~s~~g~~l~sgs~d-----~~i~vwd~~~~~ 367 (406)
+=.. .+.........+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 227 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 227 EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 4221 11111112223333 56777778744 568888887643
No 311
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.33 E-value=0.11 Score=48.90 Aligned_cols=103 Identities=10% Similarity=0.158 Sum_probs=62.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE--ecc------cccCeeeEEECCC---CCEEEEEeC-------
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA--LHG------HLDSVQDIAFDQS---GKLLVSCSA------- 168 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~--~~~------h~~~V~~l~~~~~---g~~l~sgs~------- 168 (406)
.....++|.|+++++++-...+.|++++..++..... +.. .......|+|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3456999999999888765556798888766654322 211 2345679999995 555544432
Q ss_pred ------CCcEEEEeCCCC-------eEE-EEEe-cCCcceEEEEEecCCCEEEEEe
Q psy226 169 ------DMSLKLWDMSTY-------QCL-KTMQ-GHDHNVTGVAFLPNSDFVLSAS 209 (406)
Q Consensus 169 ------d~~i~vwd~~~~-------~~~-~~~~-~h~~~v~~~~~~p~~~~l~s~s 209 (406)
...|.-++.... +.+ ..+. ...+....|+|.|+|.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 124555554321 111 1122 1235678999999998766644
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.29 E-value=0.013 Score=51.88 Aligned_cols=220 Identities=10% Similarity=0.103 Sum_probs=102.9
Q ss_pred CCEEEEEe-CC-----CcEEEEeCCCCeEEEE--EecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEEcCCCe---
Q psy226 160 GKLLVSCS-AD-----MSLKLWDMSTYQCLKT--MQGHDHNVTGVAFLPNSDFVLSASRD-----KTIKMWEVATGY--- 223 (406)
Q Consensus 160 g~~l~sgs-~d-----~~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~iwd~~~~~--- 223 (406)
+.+++.|+ .+ ..+.+||..+.+.... +........ ++. .++..++.|+.+ ..+.+||..+..
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~-~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVA-SVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCE-EEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcccc-EEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 34555555 22 3688888877653221 111111112 222 256667777754 468899987765
Q ss_pred EEEE--eecCCccEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccC
Q psy226 224 CVKT--LTGHREWVRQIKVSPDGTLLASCSND-----HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAG 296 (406)
Q Consensus 224 ~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 296 (406)
-... +.........+.+ ++.+++.|+.+ ..+.+||+.+..=.. + .-.|...... ...
T Consensus 93 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~----------~~~p~~r~~~-~~~-- 156 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM-L----------GDMQTAREGA-GLV-- 156 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEE-E----------EECSSCCBSC-EEE--
T ss_pred eEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEE-C----------CCCCCCcccc-eEE--
Confidence 2222 1111111122222 56677777644 356777775532111 1 0011000000 000
Q ss_pred CCCCCCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCC
Q psy226 297 RPPGQGGGPYLATGSRD-----KTIKLWDVGSGSLLFT--LIGHDNWVRGVTFHPGGKYLVSCGDD-----KTLRVWDTA 364 (406)
Q Consensus 297 ~~~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~~--~~~h~~~v~~l~~s~~g~~l~sgs~d-----~~i~vwd~~ 364 (406)
..++.+++.|+.+ ..+.+||+.+..=... +.........+.+ +++.++.|+.+ ..+.+||..
T Consensus 157 ----~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 157 ----VASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp ----EETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred ----EECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCC
Confidence 0024556666544 4588899877643221 1111111222232 56677777654 468899987
Q ss_pred CCcc--ceeeccccceEEEEEEeCCCCEEEEeeCCC-----eEEEeec
Q psy226 365 NKRN--MKTLEAHSHFVTSLDFHRAHPYVVTGSVDK-----TVKVWEC 405 (406)
Q Consensus 365 ~~~~--~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg-----~v~iw~~ 405 (406)
+.+- +..+.........+.+ ++.+++.|+.++ .|.+||.
T Consensus 231 ~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 231 TDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEET
T ss_pred CCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcC
Confidence 6532 2222111111112222 667778887663 4666664
No 313
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.15 E-value=0.05 Score=50.00 Aligned_cols=144 Identities=17% Similarity=0.183 Sum_probs=91.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeEEEEeecC----CccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc----------
Q psy226 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGH----REWVRQIKVSPDGTLLASCSNDHTARVWSLATKET---------- 266 (406)
Q Consensus 201 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~---------- 266 (406)
+|..++.+ .++.||.-++..+...+.+... -..+..+..+|+|.+||..+ +..|.|..+..+..
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 44444443 3466776666533333444332 12478899999999998875 56899988873210
Q ss_pred ee--EEec------CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCC--eEE--------E
Q psy226 267 KA--ELRG------HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG--SLL--------F 328 (406)
Q Consensus 267 ~~--~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~--~~~--------~ 328 (406)
.. .+.- ...+|..+.|+|-.. .+..|++-..|++||+||+... .+. +
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~---------------~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~f 173 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSY---------------RDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSF 173 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBG---------------GGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccC---------------CCCeEEEEecCCEEEEEEcccCCCCCcchhcccccc
Confidence 11 1111 245689999998532 3557899999999999999752 122 1
Q ss_pred EEeCCCcCEEEEEEcCCCCEEEEEe--CCCeEEEE
Q psy226 329 TLIGHDNWVRGVTFHPGGKYLVSCG--DDKTLRVW 361 (406)
Q Consensus 329 ~~~~h~~~v~~l~~s~~g~~l~sgs--~d~~i~vw 361 (406)
.+......|.+++|.++|-.|...+ .+|-|+-.
T Consensus 174 g~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 174 GLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 1122335689999999887666644 78888754
No 314
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.09 E-value=0.16 Score=46.04 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=43.0
Q ss_pred cCEEEEEEcC-------CCCEEEEEeCCCeEEEEeCCCCcccee---eccccceEEEEEEeCCCCEEEEe-eCCCeE
Q psy226 335 NWVRGVTFHP-------GGKYLVSCGDDKTLRVWDTANKRNMKT---LEAHSHFVTSLDFHRAHPYVVTG-SVDKTV 400 (406)
Q Consensus 335 ~~v~~l~~s~-------~g~~l~sgs~d~~i~vwd~~~~~~~~~---l~~h~~~v~~l~~~~~~~~l~sg-s~Dg~v 400 (406)
..+..++|.. +|.++++.-..+.|...++..++.... +......+..+++.|+|.+.++. ..+|.|
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 3577888864 477777776778888887765433222 22223468999999999876643 345544
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.03 E-value=0.055 Score=47.69 Aligned_cols=219 Identities=13% Similarity=0.186 Sum_probs=100.1
Q ss_pred CEEEEEeCC----CcEEEEeCCCCeEEEE--EecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEEcCCCeEEEE--
Q psy226 161 KLLVSCSAD----MSLKLWDMSTYQCLKT--MQGHDHNVTGVAFLPNSDFVLSASRD-----KTIKMWEVATGYCVKT-- 227 (406)
Q Consensus 161 ~~l~sgs~d----~~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~iwd~~~~~~~~~-- 227 (406)
.+++.|+.+ ..+..+|+.+.+.... +......- +++.. ++..++.|+.+ ..+.+||..+..-...
T Consensus 17 ~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 17 LMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 344445432 3577888877653221 11111111 22222 56666777654 3588899877653322
Q ss_pred eecCCccEEEEEECCCCCEEEEEeCCC-----eEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCC
Q psy226 228 LTGHREWVRQIKVSPDGTLLASCSNDH-----TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQG 302 (406)
Q Consensus 228 ~~~~~~~v~~l~~~~~~~~l~s~~~d~-----~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (406)
+.........+.+ ++.+++.|+.++ .+.+||+.+..=.. +.. .|..... ... ...
T Consensus 95 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~----------~p~~r~~-~~~------~~~ 154 (302)
T 2xn4_A 95 MRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH-VAP----------MNTRRSS-VGV------GVV 154 (302)
T ss_dssp CSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEE-ECC----------CSSCCBS-CEE------EEE
T ss_pred CCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEee-cCC----------CCCcccC-ceE------EEE
Confidence 1111111122222 566777777553 46667765432111 100 0000000 000 000
Q ss_pred CCCEEEEEeCC-------CcEEEEECCCCeEEEE--EeCCCcCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCcc
Q psy226 303 GGPYLATGSRD-------KTIKLWDVGSGSLLFT--LIGHDNWVRGVTFHPGGKYLVSCGDD-----KTLRVWDTANKRN 368 (406)
Q Consensus 303 ~~~~l~s~~~d-------~~i~lwd~~~~~~~~~--~~~h~~~v~~l~~s~~g~~l~sgs~d-----~~i~vwd~~~~~~ 368 (406)
++.+++.|+.+ ..+.+||+.+.+=... +.........+.+ +++.++.|+.+ ..+.+||..+.+-
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 232 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAW 232 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCE
Confidence 24455555432 3588899877643221 1111111222222 56777777654 3688999876532
Q ss_pred --ceeeccccceEEEEEEeCCCCEEEEeeCCC-----eEEEeec
Q psy226 369 --MKTLEAHSHFVTSLDFHRAHPYVVTGSVDK-----TVKVWEC 405 (406)
Q Consensus 369 --~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg-----~v~iw~~ 405 (406)
+..+......-..+. .++.+++.|+.++ .|.+||.
T Consensus 233 ~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~ 274 (302)
T 2xn4_A 233 RQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNP 274 (302)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEET
T ss_pred eeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcC
Confidence 222211111111122 2667778887664 3777775
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.01 E-value=0.02 Score=47.68 Aligned_cols=142 Identities=15% Similarity=0.056 Sum_probs=82.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcE------EEEec-ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEY------ERALH-GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~------~~~~~-~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~ 179 (406)
..+..++|||++.+.+. .+|.+.-.+..+... ...+- +--..-.++.|.++|.+-++ .||.|.-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 46779999999987777 677666555544211 11121 00112478999999987777 569888777633
Q ss_pred CeE-------EEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCe------EEEEee-cCCccEEEEEECCCCC
Q psy226 180 YQC-------LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY------CVKTLT-GHREWVRQIKVSPDGT 245 (406)
Q Consensus 180 ~~~-------~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~------~~~~~~-~~~~~v~~l~~~~~~~ 245 (406)
... ...-.+--..+..+.|.|+|.+.+.. |+.+.-+.-.++. ....+. +.-..-+-+.|.++|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 110 11111122568899999999877666 7765433222111 011111 2223345577899998
Q ss_pred EEEEEeCCCeE
Q psy226 246 LLASCSNDHTA 256 (406)
Q Consensus 246 ~l~s~~~d~~v 256 (406)
+.+.. ++.+
T Consensus 195 l~~v~--~g~~ 203 (236)
T 1tl2_A 195 LFGVQ--GGKF 203 (236)
T ss_dssp EEEEE--TTEE
T ss_pred EEEEe--CCeE
Confidence 77766 6643
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.98 E-value=0.055 Score=47.95 Aligned_cols=143 Identities=11% Similarity=0.051 Sum_probs=71.1
Q ss_pred CCCEEEEEeC----CCcEEEEEcCCCcEEEEecccccCe-eeEEECCCCCEEEEEeC----C-----CcEEEEeCCCCeE
Q psy226 117 VFSLMASCSE----DATIRLWDYETGEYERALHGHLDSV-QDIAFDQSGKLLVSCSA----D-----MSLKLWDMSTYQC 182 (406)
Q Consensus 117 ~~~~latgs~----dg~v~vwd~~~~~~~~~~~~h~~~V-~~l~~~~~g~~l~sgs~----d-----~~i~vwd~~~~~~ 182 (406)
++.+++.|+. -..+.+||..+++....-....... .+++. .++.+++.|+. + ..+.+||..+.+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 3456666653 2468899988877554311111111 12222 25666666665 2 3588889877643
Q ss_pred EEE--EecCCcceEEEEEecCCCEEEEEeCC-----CcEEEEEcCCCeEEEE--eecCCccEEEEEECCCCCEEEEEeCC
Q psy226 183 LKT--MQGHDHNVTGVAFLPNSDFVLSASRD-----KTIKMWEVATGYCVKT--LTGHREWVRQIKVSPDGTLLASCSND 253 (406)
Q Consensus 183 ~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~d 253 (406)
... +.........+.+ ++..++.|+.+ ..+.+||..+..-... +.........+.+ ++.+++.|+.+
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 178 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFD 178 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCC
Confidence 221 1111112222222 56666666543 3578888877643221 1111111122222 56667777654
Q ss_pred -----CeEEEEeCCCc
Q psy226 254 -----HTARVWSLATK 264 (406)
Q Consensus 254 -----~~v~vwd~~~~ 264 (406)
..+.+||+.+.
T Consensus 179 ~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 179 GTNRLNSAECYYPERN 194 (308)
T ss_dssp SSCBCCCEEEEETTTT
T ss_pred CCCcCceEEEEeCCCC
Confidence 34777776543
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.97 E-value=0.14 Score=45.39 Aligned_cols=139 Identities=8% Similarity=0.023 Sum_probs=69.3
Q ss_pred EEEEEeCCCcEEEEEcCCCcEEE-EecccccCeeeEEECCCCCEEEEEeC-----C------CcEEEEeCCCCeEEEEEe
Q psy226 120 LMASCSEDATIRLWDYETGEYER-ALHGHLDSVQDIAFDQSGKLLVSCSA-----D------MSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 120 ~latgs~dg~v~vwd~~~~~~~~-~~~~h~~~V~~l~~~~~g~~l~sgs~-----d------~~i~vwd~~~~~~~~~~~ 187 (406)
+++.|+ ..+.+||..+++... .+..............++.+++.|+. . ..+.+||..+.+-. .+.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECC
Confidence 344455 578999999887643 11111122222233456777777773 1 12778888776532 221
Q ss_pred cCCcc--eEEEEEecCCCEEEEEeCC--------CcEEEEEcCCCeEEEE--eecCCccEEEEEECCCCCEEEEEeC-C-
Q psy226 188 GHDHN--VTGVAFLPNSDFVLSASRD--------KTIKMWEVATGYCVKT--LTGHREWVRQIKVSPDGTLLASCSN-D- 253 (406)
Q Consensus 188 ~h~~~--v~~~~~~p~~~~l~s~s~d--------~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~-d- 253 (406)
....+ -.+++.. ++..++.|+.+ ..+.+||..+..-... +.........+. .++++++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 160 (315)
T 4asc_A 84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSD 160 (315)
T ss_dssp CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTT
T ss_pred CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCC
Confidence 11111 0112222 55566666632 4588899887643221 111111111222 35566677765 2
Q ss_pred ----CeEEEEeCCCc
Q psy226 254 ----HTARVWSLATK 264 (406)
Q Consensus 254 ----~~v~vwd~~~~ 264 (406)
..+.+||+.+.
T Consensus 161 ~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 161 RKCLNKMCVYDPKKF 175 (315)
T ss_dssp SCBCCCEEEEETTTT
T ss_pred CcccceEEEEeCCCC
Confidence 35777777653
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.97 E-value=0.097 Score=46.18 Aligned_cols=217 Identities=10% Similarity=0.096 Sum_probs=103.2
Q ss_pred CEEEEEeC--CCcEEEEeCCCCeEEEE--EecCCcceEEEEEecCCCEEEEEeCC----CcEEEEEcCCCeEEEEe--ec
Q psy226 161 KLLVSCSA--DMSLKLWDMSTYQCLKT--MQGHDHNVTGVAFLPNSDFVLSASRD----KTIKMWEVATGYCVKTL--TG 230 (406)
Q Consensus 161 ~~l~sgs~--d~~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d----~~i~iwd~~~~~~~~~~--~~ 230 (406)
.+++.|+. ...+.+||..+.+-... +.........+. -++..++.|+.+ ..+.+||..+..-...- ..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 34555654 35788899887653221 111111122222 256666777755 56888998876533221 11
Q ss_pred CCccEEEEEECCCCCEEEEEeCC------CeEEEEeCCCccceeE--EecCCceEEEEEeCCCCCccccccccCCCCCCC
Q psy226 231 HREWVRQIKVSPDGTLLASCSND------HTARVWSLATKETKAE--LRGHDHTVECVAWAPGVASESISEAAGRPPGQG 302 (406)
Q Consensus 231 ~~~~v~~l~~~~~~~~l~s~~~d------~~v~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (406)
.......+.+ ++.+++.|+.+ ..+.+||+.+..=... +......-..+. .
T Consensus 91 ~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--------------------~ 148 (306)
T 3ii7_A 91 PRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--------------------A 148 (306)
T ss_dssp CCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--------------------E
T ss_pred cccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--------------------E
Confidence 1111122222 56677777755 4577788765421110 000000000000 0
Q ss_pred CCCEEEEEeC---------CCcEEEEECCCCeEEEE--EeCCCcCEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCC
Q psy226 303 GGPYLATGSR---------DKTIKLWDVGSGSLLFT--LIGHDNWVRGVTFHPGGKYLVSCGDD-----KTLRVWDTANK 366 (406)
Q Consensus 303 ~~~~l~s~~~---------d~~i~lwd~~~~~~~~~--~~~h~~~v~~l~~s~~g~~l~sgs~d-----~~i~vwd~~~~ 366 (406)
++.+++.|+. -..+.+||..+.+=... +......-..+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 2445555543 34588899877643221 1111111122222 56666776643 45788998765
Q ss_pred c--cceeeccccceEEEEEEeCCCCEEEEeeCC-----CeEEEeec
Q psy226 367 R--NMKTLEAHSHFVTSLDFHRAHPYVVTGSVD-----KTVKVWEC 405 (406)
Q Consensus 367 ~--~~~~l~~h~~~v~~l~~~~~~~~l~sgs~D-----g~v~iw~~ 405 (406)
+ .+..+........++.+ ++.+++.|+.+ ..+.+||.
T Consensus 227 ~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~ 270 (306)
T 3ii7_A 227 EWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNT 270 (306)
T ss_dssp EEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEET
T ss_pred cEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcC
Confidence 3 22222211111122223 66778888855 35677764
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.92 E-value=0.22 Score=44.86 Aligned_cols=144 Identities=19% Similarity=0.156 Sum_probs=84.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEE--e----cccccCeeeEEECCC---CCEEEEE---eCCCcE
Q psy226 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA--L----HGHLDSVQDIAFDQS---GKLLVSC---SADMSL 172 (406)
Q Consensus 105 h~~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~--~----~~h~~~V~~l~~~~~---g~~l~sg---s~d~~i 172 (406)
--..-..++|.|++.++++--..|.|++++..+++.... + .........|+|+|+ +..|... ..+..|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 344567999999999888876689999998766654221 1 122456789999995 3444432 234455
Q ss_pred EEEeCCC----------CeEE-EEEe-cCCcceEEEEEecCCCEEEEEeC-------------CCcEEEEEcCCC-----
Q psy226 173 KLWDMST----------YQCL-KTMQ-GHDHNVTGVAFLPNSDFVLSASR-------------DKTIKMWEVATG----- 222 (406)
Q Consensus 173 ~vwd~~~----------~~~~-~~~~-~h~~~v~~~~~~p~~~~l~s~s~-------------d~~i~iwd~~~~----- 222 (406)
.-|.+.. .+.+ ..+. +..+.-..|.|.|+|.+.++.+. -+.|.-.+....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 5565543 1221 1222 22345567999999987776432 234433343221
Q ss_pred ----eEEEEeecCCccEEEEEECCCCCEEEEE
Q psy226 223 ----YCVKTLTGHREWVRQIKVSPDGTLLASC 250 (406)
Q Consensus 223 ----~~~~~~~~~~~~v~~l~~~~~~~~l~s~ 250 (406)
..+. -.+|+. ...++|+|+|.++++=
T Consensus 190 Pf~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 190 PFPGSPVY-SYGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp SSTTCCEE-EBCCSB-CCEEEECTTCCEEEEE
T ss_pred CCCCCeEE-eeCCCC-cceEEECCCCCEEEEe
Confidence 1111 124543 4568999988766553
No 321
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.87 E-value=0.21 Score=45.19 Aligned_cols=62 Identities=15% Similarity=0.318 Sum_probs=42.8
Q ss_pred cCEEEEEEcCCCCEEEEEe-CCCeEEEEeCCC-Ccc--ceeeccccceEEEEEEeC-CCCEEEEeeCC
Q psy226 335 NWVRGVTFHPGGKYLVSCG-DDKTLRVWDTAN-KRN--MKTLEAHSHFVTSLDFHR-AHPYVVTGSVD 397 (406)
Q Consensus 335 ~~v~~l~~s~~g~~l~sgs-~d~~i~vwd~~~-~~~--~~~l~~h~~~v~~l~~~~-~~~~l~sgs~D 397 (406)
...+.++||||+++|+.+. ..+.|+.|++.. +.. .+.+. .......++.++ +|.+.+++..+
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCC
Confidence 3578999999998876654 578999999853 221 22332 245678889999 58887766544
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.35 Score=43.34 Aligned_cols=197 Identities=10% Similarity=0.062 Sum_probs=107.7
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeccc-ccCeeeEEE---CCCCCEEEEE-eCCCcEEEEeCCCCeEEEEEec----C
Q psy226 119 SLMASCSEDATIRLWDYETGEYERALHGH-LDSVQDIAF---DQSGKLLVSC-SADMSLKLWDMSTYQCLKTMQG----H 189 (406)
Q Consensus 119 ~~latgs~dg~v~vwd~~~~~~~~~~~~h-~~~V~~l~~---~~~g~~l~sg-s~d~~i~vwd~~~~~~~~~~~~----h 189 (406)
.+++.++.||.|.-.|..+|+..-.+... ..++....- ..++..++.. +.||.+..++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47889999999999999999988887653 122221110 0123334343 5899999999988754433321 1
Q ss_pred CcceEE---EEE-e----cCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCc--c-----EEEEEEC-----CCCCEEEE
Q psy226 190 DHNVTG---VAF-L----PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE--W-----VRQIKVS-----PDGTLLAS 249 (406)
Q Consensus 190 ~~~v~~---~~~-~----p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~--~-----v~~l~~~-----~~~~~l~s 249 (406)
..++.. ... . ..+..+++|+.++.+...|..+|+.+..+..... . ..|.... ..+..++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 112221 000 0 1456889999999999999999999988864321 0 0011110 12346666
Q ss_pred EeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEE
Q psy226 250 CSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF 328 (406)
Q Consensus 250 ~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~ 328 (406)
+..+..+.+.+ ++++ +- ....-.|.+......+ .+ ......++.+ +.++.||.|.-+|..+|..+.
T Consensus 171 g~~~y~v~~~~-~sG~-~W-------~~~~s~~~~~~~~~~~--~~-~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SY-------NVTYSTWQQNVLDVPL--AL-QNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CC-------CCEEEEEECCTTTHHH--HT-TCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eE-------EEeccccccccccccc--cc-ccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 66666666665 2322 10 1111123222111000 00 0000112444 457889999999988888765
No 323
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.63 E-value=0.33 Score=42.98 Aligned_cols=244 Identities=12% Similarity=0.140 Sum_probs=139.5
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEecCC
Q psy226 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST-YQCLKTMQGHD 190 (406)
Q Consensus 112 v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~-~~~~~~~~~h~ 190 (406)
...||..+.+|-=. ..++.|+|+++.+.++...- ...|.--.|-.+.. |+-.. +..|.-|++.. ..+.+.+..|.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~ 147 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHS 147 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCG
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecch
Confidence 44688888777665 68899999999877666553 35666667755443 43333 45799999974 34555555543
Q ss_pred ----cceEEEEEecCCCEEEEEe-------CCCcEEEEEcCCCeEEEEeecCCccEEEEEECCC---CCEEEEEeC---C
Q psy226 191 ----HNVTGVAFLPNSDFVLSAS-------RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD---GTLLASCSN---D 253 (406)
Q Consensus 191 ----~~v~~~~~~p~~~~l~s~s-------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~s~~~---d 253 (406)
..|..-..+++.+.++..+ -.|.+.+|..+.+ ..+.+.||......+.+..+ .++|+-+.. .
T Consensus 148 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 226 (365)
T 2xzh_A 148 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 226 (365)
T ss_dssp GGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTE
T ss_pred hcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 3566666677777544322 1367788887665 44667788654433332211 123443332 2
Q ss_pred CeEEEEeCCCc-cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy226 254 HTARVWSLATK-ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332 (406)
Q Consensus 254 ~~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 332 (406)
+.+++.++... ... .........+-|.|+...+..-.... ...-..+..-+.-|.|.+||+.++.+++.-+=
T Consensus 227 ~kLhIiEi~~~~~~~---~~f~kk~vdi~fppea~~DFPVamqv----s~kygviyviTK~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 227 GKLHIIEVGTPPTGN---QPFPKKAVDVFFPPEAQNDFPVAMQI----SEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp EEEEEEECSSCCTTC---CCCCCEEEEECCCTTCTTCCEEEEEE----ETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEEcCCCCCCC---CCcccccceeeCCccccCCceEEEEe----cccCCEEEEEeCCcEEEEEEcccCcEEEEecc
Confidence 58888888543 111 11122233344444322211000000 01123566667889999999999999987665
Q ss_pred CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy226 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 333 h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~ 367 (406)
....|..-+-+....-++.....|.|.--.++...
T Consensus 300 S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 300 SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred CCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 55666555554444445555567766655555443
No 324
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.62 E-value=0.32 Score=44.79 Aligned_cols=141 Identities=17% Similarity=0.196 Sum_probs=92.6
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEeccc----ccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCe-----------
Q psy226 117 VFSLMASCSEDATIRLWDYETGEYERALHGH----LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQ----------- 181 (406)
Q Consensus 117 ~~~~latgs~dg~v~vwd~~~~~~~~~~~~h----~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~----------- 181 (406)
++.-++.+ .++.||.-++..+..-+.++-. -+.|..+..+|+|++||..+ +..|.|-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 44444443 2467777776643322233321 23688899999999999875 4578888776211
Q ss_pred -EEEEEec------CCcceEEEEEecC---CCEEEEEeCCCcEEEEEcCCCe--EEEEee---------cCCccEEEEEE
Q psy226 182 -CLKTMQG------HDHNVTGVAFLPN---SDFVLSASRDKTIKMWEVATGY--CVKTLT---------GHREWVRQIKV 240 (406)
Q Consensus 182 -~~~~~~~------h~~~v~~~~~~p~---~~~l~s~s~d~~i~iwd~~~~~--~~~~~~---------~~~~~v~~l~~ 240 (406)
..+.+.- ...+|..+.|+|- +..|++-..|++|++||+.... .. .+. .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1223322 2467999999995 4689999999999999997532 11 222 12256889999
Q ss_pred CCCCCEEEEEe--CCCeEEEEe
Q psy226 241 SPDGTLLASCS--NDHTARVWS 260 (406)
Q Consensus 241 ~~~~~~l~s~~--~d~~v~vwd 260 (406)
.+++-.|...+ .+|.|+-..
T Consensus 188 g~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp CTTSSCEEEEECTTSCEEEEES
T ss_pred cCCCcEEEEEecCCCCCEEEEC
Confidence 99888777755 778887653
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.52 E-value=0.38 Score=42.55 Aligned_cols=133 Identities=8% Similarity=0.065 Sum_probs=64.6
Q ss_pred cEEEEEcCCCcEEEE-ecccccCeeeEEECCCCCEEEEEeC----CC-------cEEEEeCCCCeEEEE--EecCCcceE
Q psy226 129 TIRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSA----DM-------SLKLWDMSTYQCLKT--MQGHDHNVT 194 (406)
Q Consensus 129 ~v~vwd~~~~~~~~~-~~~h~~~V~~l~~~~~g~~l~sgs~----d~-------~i~vwd~~~~~~~~~--~~~h~~~v~ 194 (406)
.+..||..+++.... +..............++.+++.|+. ++ .+.++|..+.+-... +.......
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~- 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF- 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC-
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc-
Confidence 378899888876542 1111112222233456777777773 12 177788876553221 11111111
Q ss_pred EEEEecCCCEEEEEeCC-------CcEEEEEcCCCeEEEEeecCCcc-EEEEEECCCCCEEEEEeC------CCeEEEEe
Q psy226 195 GVAFLPNSDFVLSASRD-------KTIKMWEVATGYCVKTLTGHREW-VRQIKVSPDGTLLASCSN------DHTARVWS 260 (406)
Q Consensus 195 ~~~~~p~~~~l~s~s~d-------~~i~iwd~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~s~~~------d~~v~vwd 260 (406)
+++.. ++..++.|+.+ ..+.+||..+..-...-...... -.+++. .++.+++.|+. -..+.+||
T Consensus 104 ~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 104 GLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp EEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEE
T ss_pred ceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEc
Confidence 22222 56666667654 24778888776433221111000 011222 35666666653 23477888
Q ss_pred CCCc
Q psy226 261 LATK 264 (406)
Q Consensus 261 ~~~~ 264 (406)
+.+.
T Consensus 182 ~~~~ 185 (318)
T 2woz_A 182 PKKG 185 (318)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7654
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.51 E-value=1.1 Score=47.41 Aligned_cols=288 Identities=13% Similarity=0.110 Sum_probs=144.0
Q ss_pred CCCeEEEEEcCC------CCEEEEEeC-CCcEEEEEcCCCcEEEEec-ccccCeeeEEEC--CCCCEEEEEeCCCcEEEE
Q psy226 106 RSPVIKVIFHPV------FSLMASCSE-DATIRLWDYETGEYERALH-GHLDSVQDIAFD--QSGKLLVSCSADMSLKLW 175 (406)
Q Consensus 106 ~~~V~~v~~~p~------~~~latgs~-dg~v~vwd~~~~~~~~~~~-~h~~~V~~l~~~--~~g~~l~sgs~d~~i~vw 175 (406)
...|.|+++.|. ..++|.|.+ |++|+|+++.+.+...... +-.....++.+. ....+|..|-.||.+.-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457999999864 369999997 9999999998765443221 111233444332 234578899999987655
Q ss_pred eC--CCCeEEE---EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccE-EEEEECCCC--CEE
Q psy226 176 DM--STYQCLK---TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV-RQIKVSPDG--TLL 247 (406)
Q Consensus 176 d~--~~~~~~~---~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v-~~l~~~~~~--~~l 247 (406)
.+ .+++... ...| ..++.=..+...+..-+-+..+....++--........+. -..+ ....|+... .-+
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~~~l~~s~l~--~~~v~~~~~F~se~~~~g~ 709 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLVFSNVN--LKEVNYMCPLNSDGYPDSL 709 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESSSSEEEEEBS--SSCCCEEEEECCSSSTTEE
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcCCceEEeccC--hHHhceEeccCcccCCCcE
Confidence 44 4554322 2233 3355444444344433333335555555433222211111 1122 223353321 234
Q ss_pred EEEeCCCeEEEEeCCCccceeE-EecCCceEEEEEeCCCCCcccccccc-------C--CC-------------------
Q psy226 248 ASCSNDHTARVWSLATKETKAE-LRGHDHTVECVAWAPGVASESISEAA-------G--RP------------------- 298 (406)
Q Consensus 248 ~s~~~d~~v~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~-------~--~~------------------- 298 (406)
+. ..++.++|..+........ -..-...+..++++|....-.+.... . .+
T Consensus 710 v~-~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 788 (1158)
T 3ei3_A 710 AL-ANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKL 788 (1158)
T ss_dssp EE-ECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCC
T ss_pred EE-EcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccccc
Confidence 43 3355688887754322111 11122345566666532210000000 0 00
Q ss_pred -------CCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC-CCcCEEEEE---EcCC-CCEEEEEe----------CCC
Q psy226 299 -------PGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVT---FHPG-GKYLVSCG----------DDK 356 (406)
Q Consensus 299 -------~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~-h~~~v~~l~---~s~~-g~~l~sgs----------~d~ 356 (406)
....-|... .-+.|++.|-.+.+.+..+.- ....+.+++ |..+ ..+|+.|. ..|
T Consensus 789 ~~~~~~~~~~~~g~~~----~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~G 864 (1158)
T 3ei3_A 789 FSSSTAPHETSFGEEV----EVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQG 864 (1158)
T ss_dssp C----------CCCEE----EEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCE
T ss_pred ccccccCchhhcCCce----eeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCce
Confidence 000001111 124589999888776655432 122344443 4332 46888775 358
Q ss_pred eEEEEeCCCCccceee--ccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 357 TLRVWDTANKRNMKTL--EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 357 ~i~vwd~~~~~~~~~l--~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
.|+++++..++ ++.+ ....+.|++|+-- .|.+|| | ...+|++|++
T Consensus 865 ri~vf~v~~~k-L~lv~~~~v~g~v~al~~~-~g~Lla-~-ig~~l~vy~l 911 (1158)
T 3ei3_A 865 RIVVFQYSDGK-LQTVAEKEVKGAVYSMVEF-NGKLLA-S-INSTVRLYEW 911 (1158)
T ss_dssp EEEEEEEETTE-EEEEEEEEESSCEEEEEEE-TTEEEE-E-ETTEEEEEEE
T ss_pred EEEEEEEECCE-EEEEEEEEcCCcCEEEeee-CCEEEE-E-cCCEEEEEEC
Confidence 99999986432 2222 1235678887743 344444 3 3478999986
No 327
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.43 E-value=1.2 Score=47.06 Aligned_cols=149 Identities=12% Similarity=0.104 Sum_probs=84.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEec-ccccCeeeEEECCC------CCEEEEEeC-CCcEEEEeCCC
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFDQS------GKLLVSCSA-DMSLKLWDMST 179 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~-~h~~~V~~l~~~~~------g~~l~sgs~-d~~i~vwd~~~ 179 (406)
.|.+.+.+. .+++.++ ++.+.++++.++++....+ .-...|.|+++.+. +.+++.|.. |++++|+++.+
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 455555543 3555554 5778888877665432211 12457999999763 469999996 99999999988
Q ss_pred CeEEEEEecC-CcceEEEEEec--CCCEEEEEeCCCcEEEEEc--CCCeEEEE---eecCCccEEEEEECCCCCEEEEEe
Q psy226 180 YQCLKTMQGH-DHNVTGVAFLP--NSDFVLSASRDKTIKMWEV--ATGYCVKT---LTGHREWVRQIKVSPDGTLLASCS 251 (406)
Q Consensus 180 ~~~~~~~~~h-~~~v~~~~~~p--~~~~l~s~s~d~~i~iwd~--~~~~~~~~---~~~~~~~v~~l~~~~~~~~l~s~~ 251 (406)
.+.+....-. .....++.+.. ...+|..|-.||.+.-+.+ .+|..... +-| ..++.-..+...|..-+-+.
T Consensus 592 l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~ 670 (1158)
T 3ei3_A 592 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFAC 670 (1158)
T ss_dssp CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEE
T ss_pred CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEE
Confidence 7665433221 22344454432 2347888999998765544 44543221 223 33444444444443322333
Q ss_pred CCCeEEEEe
Q psy226 252 NDHTARVWS 260 (406)
Q Consensus 252 ~d~~v~vwd 260 (406)
.+....++.
T Consensus 671 s~rp~liy~ 679 (1158)
T 3ei3_A 671 SDRPTVIYS 679 (1158)
T ss_dssp SSSCEEEEE
T ss_pred CCCCEEEEE
Confidence 344444443
No 328
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.42 E-value=0.46 Score=42.10 Aligned_cols=252 Identities=11% Similarity=0.135 Sum_probs=150.3
Q ss_pred CCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEE
Q psy226 126 EDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205 (406)
Q Consensus 126 ~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 205 (406)
.+..|.|-|+.++....+-. -...+.-.+|..+.||.-. ..++.++|+++.+.++...-.+ .|.-=+|-... .|
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~-~L 120 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TV 120 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSS-EE
T ss_pred CCCEEEEEECCCCCCccccc---cccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCC-eE
Confidence 34478888988765332211 1122344578888777655 6789999999988887776544 55555665443 33
Q ss_pred EEEeCCCcEEEEEcCC-CeEEEEeecCC----ccEEEEEECCCCCEEEEEeC-------CCeEEEEeCCCccceeEEecC
Q psy226 206 LSASRDKTIKMWEVAT-GYCVKTLTGHR----EWVRQIKVSPDGTLLASCSN-------DHTARVWSLATKETKAELRGH 273 (406)
Q Consensus 206 ~s~s~d~~i~iwd~~~-~~~~~~~~~~~----~~v~~l~~~~~~~~l~s~~~-------d~~v~vwd~~~~~~~~~~~~~ 273 (406)
+-.+ +..|.-|++.. ..+.+.+.-|. ..|..-..+++.++++..+- .|.+.+|..+.. ..+.+.+|
T Consensus 121 ~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh 198 (365)
T 2xzh_A 121 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 198 (365)
T ss_dssp EEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCS
T ss_pred EEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeee
Confidence 3332 45799999864 34566665553 45667778899998766542 366778887643 44567777
Q ss_pred CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC---CCcEEEEECCCC---eE------EEE-Ee--CCCcCEE
Q psy226 274 DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR---DKTIKLWDVGSG---SL------LFT-LI--GHDNWVR 338 (406)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~lwd~~~~---~~------~~~-~~--~h~~~v~ 338 (406)
...-..+....... ....+.-+.. .+.+.+-++... .. +-. +. ...+..-
T Consensus 199 aa~F~~~~~~g~~~---------------~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPV 263 (365)
T 2xzh_A 199 AASFAQFKMEGNAE---------------ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 263 (365)
T ss_dssp EEEEEEECCTTCSS---------------CEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEE
T ss_pred eeeeEEEecCCCCC---------------CceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceE
Confidence 65443332211100 1112333322 247888887432 11 111 11 1244566
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeE
Q psy226 339 GVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTV 400 (406)
Q Consensus 339 ~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v 400 (406)
++..|+.-..++.-..-|.|++||+.++.++..-.--...|..-+.+....-++.-...|.|
T Consensus 264 amqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 264 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 78888877788888899999999999999876554444445444444443334444455554
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.26 E-value=0.71 Score=42.63 Aligned_cols=253 Identities=11% Similarity=0.131 Sum_probs=153.8
Q ss_pred CCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEE
Q psy226 126 EDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205 (406)
Q Consensus 126 ~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 205 (406)
.+..|.|-|+.++....+-. -..-+.-.+|..+.||-=. ..++.|+|+++.+.++...-.+ .|.-=.|-.+. .|
T Consensus 46 ~~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~-~l 119 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLN-TV 119 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETT-EE
T ss_pred CCCeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCC-eE
Confidence 34478888988765332111 1122445577777776654 6799999999988887776555 44444555443 33
Q ss_pred EEEeCCCcEEEEEcCC-CeEEEEeecCC----ccEEEEEECCCCCEEEEEeC-------CCeEEEEeCCCccceeEEecC
Q psy226 206 LSASRDKTIKMWEVAT-GYCVKTLTGHR----EWVRQIKVSPDGTLLASCSN-------DHTARVWSLATKETKAELRGH 273 (406)
Q Consensus 206 ~s~s~d~~i~iwd~~~-~~~~~~~~~~~----~~v~~l~~~~~~~~l~s~~~-------d~~v~vwd~~~~~~~~~~~~~ 273 (406)
+-. .+..|.-|++.. ..+.+.+.-|. ..|..-..+++.++++..+- .|.+.+|..+.. ..+.+.+|
T Consensus 120 ~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGh 197 (494)
T 1bpo_A 120 ALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 197 (494)
T ss_dssp EEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCS
T ss_pred EEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheee
Confidence 332 356799999864 34566665553 45777778899998875542 367788887643 45567788
Q ss_pred CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCC---CcEEEEECCCC---e-----EEEE--Ee--CCCcCEE
Q psy226 274 DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD---KTIKLWDVGSG---S-----LLFT--LI--GHDNWVR 338 (406)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~lwd~~~~---~-----~~~~--~~--~h~~~v~ 338 (406)
...-..+....... ....+.-+... +.+.|-++... . .... +. ...+...
T Consensus 198 aa~F~~~~~~g~~~---------------~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPv 262 (494)
T 1bpo_A 198 AASFAQFKMEGNAE---------------ESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 262 (494)
T ss_dssp EEEEEEEECTTCSS---------------EEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEE
T ss_pred eeeeEEEecCCCCC---------------CceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCcee
Confidence 76554444321110 01123333332 57888887432 1 1111 11 1244567
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEEEeeCCCeEE
Q psy226 339 GVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVK 401 (406)
Q Consensus 339 ~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~ 401 (406)
++..|+.-..++.-..-|.|+++|+.++.++..-.--...|..-+.+....-++.-...|.|.
T Consensus 263 amqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl 325 (494)
T 1bpo_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVL 325 (494)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEE
T ss_pred EEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEE
Confidence 788888888888889999999999999998765544444555555555444444444666543
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.23 E-value=0.22 Score=43.97 Aligned_cols=219 Identities=11% Similarity=0.084 Sum_probs=100.4
Q ss_pred CCCEEEEEeCC----CcEEEEeCCCCeEEEE--EecCCcceEEEEEecCCCEEEEEeC----C-----CcEEEEEcCCCe
Q psy226 159 SGKLLVSCSAD----MSLKLWDMSTYQCLKT--MQGHDHNVTGVAFLPNSDFVLSASR----D-----KTIKMWEVATGY 223 (406)
Q Consensus 159 ~g~~l~sgs~d----~~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~----d-----~~i~iwd~~~~~ 223 (406)
++.+++.|+.+ ..+.+||..+.+.... +....... +++.. ++.+++.|+. + ..+.+||..+..
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 34555555531 3578888876553221 11111111 22222 5566666665 2 467888887764
Q ss_pred EEEE--eecCCccEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCcccee--EEecCCceEEEEEeCCCCCccccccc
Q psy226 224 CVKT--LTGHREWVRQIKVSPDGTLLASCSND-----HTARVWSLATKETKA--ELRGHDHTVECVAWAPGVASESISEA 294 (406)
Q Consensus 224 ~~~~--~~~~~~~v~~l~~~~~~~~l~s~~~d-----~~v~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~ 294 (406)
-... +.........+.+ ++++++.|+.+ ..+.+||+.+..=.. .+......-..+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~------------ 167 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL------------ 167 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE------------
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE------------
Confidence 3221 1111111122222 56666666643 346677765432110 00000000000000
Q ss_pred cCCCCCCCCCCEEEEEeCC-----CcEEEEECCCCeEEEE--EeCCCcCEEEEEEcCCCCEEEEEeCC-----CeEEEEe
Q psy226 295 AGRPPGQGGGPYLATGSRD-----KTIKLWDVGSGSLLFT--LIGHDNWVRGVTFHPGGKYLVSCGDD-----KTLRVWD 362 (406)
Q Consensus 295 ~~~~~~~~~~~~l~s~~~d-----~~i~lwd~~~~~~~~~--~~~h~~~v~~l~~s~~g~~l~sgs~d-----~~i~vwd 362 (406)
++.+++.|+.+ ..+.+||+.+.+=... +.........+.+ +++.++.|+.+ ..+.+||
T Consensus 168 --------~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 237 (308)
T 1zgk_A 168 --------NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYD 237 (308)
T ss_dssp --------TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEE
T ss_pred --------CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEe
Confidence 24455666544 4588889876542211 1111111222333 56677777654 5688999
Q ss_pred CCCCcc--ceeeccccceEEEEEEeCCCCEEEEeeCCC-----eEEEeec
Q psy226 363 TANKRN--MKTLEAHSHFVTSLDFHRAHPYVVTGSVDK-----TVKVWEC 405 (406)
Q Consensus 363 ~~~~~~--~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg-----~v~iw~~ 405 (406)
+.+.+- +..+.........+.+ ++.+++.|+.++ .+.+||.
T Consensus 238 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 238 VETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp TTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEET
T ss_pred CCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcC
Confidence 876532 2222111111112222 567778887653 4666664
No 331
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.20 E-value=0.68 Score=41.82 Aligned_cols=192 Identities=16% Similarity=0.249 Sum_probs=108.2
Q ss_pred CeeeEEECCCCCEEEEE------------eCCCcEEEEeCCC--CeEE-EEEec-----CCcceEEEEEec--CCC-EEE
Q psy226 150 SVQDIAFDQSGKLLVSC------------SADMSLKLWDMST--YQCL-KTMQG-----HDHNVTGVAFLP--NSD-FVL 206 (406)
Q Consensus 150 ~V~~l~~~~~g~~l~sg------------s~d~~i~vwd~~~--~~~~-~~~~~-----h~~~v~~~~~~p--~~~-~l~ 206 (406)
...+++..++|..++++ ..+|.|.++|..+ .+.. -.+.+ ..-....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34466667766554444 2689999999873 2221 12222 123567787766 343 454
Q ss_pred EEe-C--CCcEEEEEcCCC--e--EEEEeecC-CccEEEEEECCCCCEEEEEeC-----------------CCeEEEEeC
Q psy226 207 SAS-R--DKTIKMWEVATG--Y--CVKTLTGH-REWVRQIKVSPDGTLLASCSN-----------------DHTARVWSL 261 (406)
Q Consensus 207 s~s-~--d~~i~iwd~~~~--~--~~~~~~~~-~~~v~~l~~~~~~~~l~s~~~-----------------d~~v~vwd~ 261 (406)
++. . +.+|.+|++..+ . .+..+.+. -...+.+.+.++|.+.++... .|.|..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 442 2 467888877543 1 23334332 235788999999987777541 244555554
Q ss_pred CCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEE-eCCCcEEEEECCC-CeE--EEEEeCCCcCE
Q psy226 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATG-SRDKTIKLWDVGS-GSL--LFTLIGHDNWV 337 (406)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~lwd~~~-~~~--~~~~~~h~~~v 337 (406)
.+ ...+...-.....++|+|+ +..|+.+ +..+.|..|++.. +.. ...+ ......
T Consensus 211 --~~-~~~~~~~l~~pNGia~spD------------------g~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~P 268 (355)
T 3sre_A 211 --ND-VRVVAEGFDFANGINISPD------------------GKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLV 268 (355)
T ss_dssp --TC-CEEEEEEESSEEEEEECTT------------------SSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEE
T ss_pred --Ce-EEEeecCCcccCcceECCC------------------CCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCC
Confidence 22 2222222334577888884 4445444 4577899999853 332 1223 234567
Q ss_pred EEEEEcC-CCCEEEEEeCC-CeEEEEeC
Q psy226 338 RGVTFHP-GGKYLVSCGDD-KTLRVWDT 363 (406)
Q Consensus 338 ~~l~~s~-~g~~l~sgs~d-~~i~vwd~ 363 (406)
-.+++++ +|++.+++..+ +.|..||.
T Consensus 269 DGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 269 DNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred ceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 7899999 59988766544 34444443
No 332
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.17 E-value=0.69 Score=41.63 Aligned_cols=104 Identities=22% Similarity=0.241 Sum_probs=62.9
Q ss_pred ccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEE--EEE----ecCCcceEEEEEecC---CCEEEEE-e--CCCcEE
Q psy226 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCL--KTM----QGHDHNVTGVAFLPN---SDFVLSA-S--RDKTIK 215 (406)
Q Consensus 148 ~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~--~~~----~~h~~~v~~~~~~p~---~~~l~s~-s--~d~~i~ 215 (406)
......|+|.|+|.++++--..|.|++++..+++.. ..+ .........|+|+|+ +..|... + .++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345678999999997777655899999987655432 111 122456789999995 3444332 2 344555
Q ss_pred EEEcCCC----------eEE-EEee-cCCccEEEEEECCCCCEEEEEe
Q psy226 216 MWEVATG----------YCV-KTLT-GHREWVRQIKVSPDGTLLASCS 251 (406)
Q Consensus 216 iwd~~~~----------~~~-~~~~-~~~~~v~~l~~~~~~~~l~s~~ 251 (406)
-|....+ +.+ ..+. +....-..|.|.|||.+.++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 5555431 111 1121 1122346799999998888765
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.12 E-value=0.66 Score=44.21 Aligned_cols=262 Identities=12% Similarity=0.146 Sum_probs=135.7
Q ss_pred EEEEEeCCCcEEEEEcCCCcEEEEeccccc-------------Ce------------e--eEEEC---CCCCEEEEEe-C
Q psy226 120 LMASCSEDATIRLWDYETGEYERALHGHLD-------------SV------------Q--DIAFD---QSGKLLVSCS-A 168 (406)
Q Consensus 120 ~latgs~dg~v~vwd~~~~~~~~~~~~h~~-------------~V------------~--~l~~~---~~g~~l~sgs-~ 168 (406)
.+.||+..|.|+|+-+.+++.++.+.-.+. .| . .+.+. .||++|..-. .
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 467899999999999999998877632110 01 1 12222 2567777765 3
Q ss_pred CCcEEEEeCCCCeEEEEEec-CCcceEEEEEe--cCCCEEEEEeC-------CCcEEEEEcCCCeEEEE---eecCCccE
Q psy226 169 DMSLKLWDMSTYQCLKTMQG-HDHNVTGVAFL--PNSDFVLSASR-------DKTIKMWEVATGYCVKT---LTGHREWV 235 (406)
Q Consensus 169 d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--p~~~~l~s~s~-------d~~i~iwd~~~~~~~~~---~~~~~~~v 235 (406)
...|-..++...++-+.+.- ....+.+++|. |+..|++.++. ||.. .++........ +.+.+-.|
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~--~~~~~~~~y~~f~~iD~~tm~v 229 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKV--FDLQDENSYTMYNAIDAETMEM 229 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSC--CCTTSTTEEEEEEEEETTTCSE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcc--cccCChhhceEEEEEcCCccEE
Confidence 45677778888888766654 34578888886 78889888775 3331 10011101011 11111111
Q ss_pred -E---------EEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCC
Q psy226 236 -R---------QIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGP 305 (406)
Q Consensus 236 -~---------~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (406)
. .+..+++|.+.++.+... +....+..+... ..=..+.|.-. .+.... ..|+
T Consensus 230 ~~Qv~v~gnld~~~~~~~g~~af~t~yNs-------E~~~~l~em~~~-e~D~~~vfn~~----~ie~~v------k~G~ 291 (638)
T 3sbq_A 230 AFQVIVDGNLDNTDADYTGRFAAATCYNS-------EKAFDLGGMMRN-ERDWVVVFDIH----AVEAAV------KAGD 291 (638)
T ss_dssp EEEEEESSCCCCEEECSSSSEEEEEESCT-------TCCSSHHHHTCS-SCEEEEEEEHH----HHHHHH------HTTC
T ss_pred EEEEEcCCChhhcCCCCCCCEEEEeeecc-------ccCcChhhcCcc-cccEEEEecHH----HHHHHH------hcCC
Confidence 1 122234444444333211 110001011000 00011111100 000000 0122
Q ss_pred EEEEEeCCC-cEEEEECCC----CeEEEEEeCCCcCEEEEEEcCCCCEEEEEe-CCCeEEEEeCCCCcc-----------
Q psy226 306 YLATGSRDK-TIKLWDVGS----GSLLFTLIGHDNWVRGVTFHPGGKYLVSCG-DDKTLRVWDTANKRN----------- 368 (406)
Q Consensus 306 ~l~s~~~d~-~i~lwd~~~----~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs-~d~~i~vwd~~~~~~----------- 368 (406)
+-. -.+ .|.+.|.+. +..+..+..-......+.++|||++++.++ .+.++.|+|+.....
T Consensus 292 ~~~---~~g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~ 368 (638)
T 3sbq_A 292 FIT---LGDSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRD 368 (638)
T ss_dssp CBC---CTTCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGG
T ss_pred eEE---ECCCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCccc
Confidence 111 121 367778765 333323333334456789999999987665 578999999864211
Q ss_pred --ceeeccccceEEEEEEeCCCCEEEEeeCCCeEEEeec
Q psy226 369 --MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405 (406)
Q Consensus 369 --~~~l~~h~~~v~~l~~~~~~~~l~sgs~Dg~v~iw~~ 405 (406)
+...+. .-.....+|+++|.-..|--.|..|.-|++
T Consensus 369 ~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSqvvkWni 406 (638)
T 3sbq_A 369 VIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQVVKWNM 406 (638)
T ss_dssp GEEECCBC-CSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred ceEeeccC-CCcccEEEECCCCceEeeeeecceEEEEec
Confidence 111221 223577899999955566679999999985
No 334
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.07 E-value=0.17 Score=45.77 Aligned_cols=91 Identities=10% Similarity=0.031 Sum_probs=45.5
Q ss_pred CCCEEEEEeC-CCcEEEEEcCC--CcEEEEeccc---ccCeeeEEECCCCCEEEEEeC-C---------CcEEEEeCCCC
Q psy226 117 VFSLMASCSE-DATIRLWDYET--GEYERALHGH---LDSVQDIAFDQSGKLLVSCSA-D---------MSLKLWDMSTY 180 (406)
Q Consensus 117 ~~~~latgs~-dg~v~vwd~~~--~~~~~~~~~h---~~~V~~l~~~~~g~~l~sgs~-d---------~~i~vwd~~~~ 180 (406)
++.+++.|+. ...+.+||..+ .+....-... ...-.++.+ ++.+++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5566666654 35688889874 4443221111 111122222 4666666665 2 46888998876
Q ss_pred eEEEEEecC--Cc-ceEEEEEecCCCEEEEEeCC
Q psy226 181 QCLKTMQGH--DH-NVTGVAFLPNSDFVLSASRD 211 (406)
Q Consensus 181 ~~~~~~~~h--~~-~v~~~~~~p~~~~l~s~s~d 211 (406)
+-.. +... .. .-.+++. .++.+++.|+.+
T Consensus 97 ~W~~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVK-LMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp EEEE-CSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred cEEE-CCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 5322 2111 11 1112222 466777777754
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.94 E-value=1 Score=41.61 Aligned_cols=244 Identities=12% Similarity=0.136 Sum_probs=140.7
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEecCC
Q psy226 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST-YQCLKTMQGHD 190 (406)
Q Consensus 112 v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~-~~~~~~~~~h~ 190 (406)
...||..+.+|-=. ..++.|+|+++....+...- ...|.--.|-.+. .|+-.+ +..|.-|++.. ..+.+.+..|.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~ 146 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCG
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecch
Confidence 45688888777655 68999999999877666553 3456666665443 344332 46799999964 34555555543
Q ss_pred ----cceEEEEEecCCCEEEEEe-------CCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCC---CEEEEEeC---C
Q psy226 191 ----HNVTGVAFLPNSDFVLSAS-------RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG---TLLASCSN---D 253 (406)
Q Consensus 191 ----~~v~~~~~~p~~~~l~s~s-------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~s~~~---d 253 (406)
..|..-..+++.+.++..+ -.|.+.+|..+.+ ..+.+.||......+.+..+. .+|+-+.. .
T Consensus 147 ~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g 225 (494)
T 1bpo_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (494)
T ss_dssp GGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTC
T ss_pred hcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCCC
Confidence 3566666677777544322 2367788887665 346677886655444433211 24444444 3
Q ss_pred CeEEEEeCCCc-cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy226 254 HTARVWSLATK-ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332 (406)
Q Consensus 254 ~~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 332 (406)
+.++|.++... .... ........+-|.|+...+....... ...-..+..-+.-|.|.+||+.++.+++.-.=
T Consensus 226 ~kLhi~Ei~~~~~~~~---~f~kk~vdv~fppe~~~DFPvamqv----s~kygviyviTK~G~i~lyDleTgt~i~~nrI 298 (494)
T 1bpo_A 226 GKLHIIEVGTPPTGNQ---PFPKKAVDVFFPPEAQNDFPVAMQI----SEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (494)
T ss_dssp CEEEEEECSCCCTTCC---CCCCEEEECCCCTTSTTCCEEEEEE----ETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred cEEEEEEcCCCccCCC---CccceeeeeeCCcccccCceeEEEe----cccCCEEEEEecCceEEEEecccceeeeeecc
Confidence 78888888543 1111 1111222333333222111000000 01123566667889999999999999987665
Q ss_pred CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Q psy226 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367 (406)
Q Consensus 333 h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~ 367 (406)
....|..-+-+....-++.....|.|.--.++...
T Consensus 299 s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 299 SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 55666655555554455555577766655554433
No 336
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.87 E-value=0.86 Score=40.15 Aligned_cols=208 Identities=6% Similarity=0.066 Sum_probs=95.1
Q ss_pred EEEEEeCCCcEEEEeCCCCeEEE-EEecCCcceEEEEEecCCCEEEEEeC-----C------CcEEEEEcCCCeEEEE--
Q psy226 162 LLVSCSADMSLKLWDMSTYQCLK-TMQGHDHNVTGVAFLPNSDFVLSASR-----D------KTIKMWEVATGYCVKT-- 227 (406)
Q Consensus 162 ~l~sgs~d~~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~s~-----d------~~i~iwd~~~~~~~~~-- 227 (406)
+++.|+ ..+..||..+.+-.. .+..............++..++.|+. . ..+..||..+..-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 568899998876432 11111122222233346777777773 1 1267788877653221
Q ss_pred eecCCccEEEEEECCCCCEEEEEeCC--------CeEEEEeCCCccc--eeEEecCCceEEEEEeCCCCCccccccccCC
Q psy226 228 LTGHREWVRQIKVSPDGTLLASCSND--------HTARVWSLATKET--KAELRGHDHTVECVAWAPGVASESISEAAGR 297 (406)
Q Consensus 228 ~~~~~~~v~~l~~~~~~~~l~s~~~d--------~~v~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 297 (406)
+.........+.+ ++.+++.|+.+ ..+.+||+.+.+= ...+......-..+.
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~---------------- 146 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS---------------- 146 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE----------------
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE----------------
Confidence 1111111111222 55666666632 3477777765321 100000000000000
Q ss_pred CCCCCCCCEEEEEeC-C-----CcEEEEECCCCeEEE--EEeCCCcCEEEEEEcCCCCEEEEEeCCC-----eEEEEeCC
Q psy226 298 PPGQGGGPYLATGSR-D-----KTIKLWDVGSGSLLF--TLIGHDNWVRGVTFHPGGKYLVSCGDDK-----TLRVWDTA 364 (406)
Q Consensus 298 ~~~~~~~~~l~s~~~-d-----~~i~lwd~~~~~~~~--~~~~h~~~v~~l~~s~~g~~l~sgs~d~-----~i~vwd~~ 364 (406)
.++.+++.|+. + ..+.+||..+.+=.. .+......-..+.+ +++.++.|+.++ .+.+||..
T Consensus 147 ----~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 220 (315)
T 4asc_A 147 ----HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSIT 220 (315)
T ss_dssp ----ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETT
T ss_pred ----ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECC
Confidence 13445666665 2 368889987754221 11111111122222 567777777554 57888987
Q ss_pred CCcc--ceeeccccceEEEEEEeCCCCEEEEeeCC
Q psy226 365 NKRN--MKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397 (406)
Q Consensus 365 ~~~~--~~~l~~h~~~v~~l~~~~~~~~l~sgs~D 397 (406)
+.+- +..+.........+.+ ++.+++.|+.+
T Consensus 221 ~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~ 253 (315)
T 4asc_A 221 DNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFA 253 (315)
T ss_dssp TTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEE
T ss_pred CCeEEECCCCCCcccceeEEEE--CCEEEEECCcc
Confidence 6532 2222111111112222 56777777764
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.74 E-value=0.75 Score=48.96 Aligned_cols=224 Identities=12% Similarity=0.158 Sum_probs=125.6
Q ss_pred CCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEE
Q psy226 126 EDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205 (406)
Q Consensus 126 ~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 205 (406)
...+|.|-|+.++....+-. -..-+.-.+|..+.++.=. ..++.|+|+++.+.++...-.+ +|.-=.|..... |
T Consensus 46 ~~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~-l 119 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNT-V 119 (1630)
T ss_pred CCceEEEEECCCCCCccccc---ccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCe-e
Confidence 34478888988765332111 1112334567777666553 6789999998876666555433 454445553333 3
Q ss_pred EEEeCCCcEEEEEcCC-CeEEEEeecC----CccEEEEEECCCCCEEEEEe-------CCCeEEEEeCCCccceeEEecC
Q psy226 206 LSASRDKTIKMWEVAT-GYCVKTLTGH----REWVRQIKVSPDGTLLASCS-------NDHTARVWSLATKETKAELRGH 273 (406)
Q Consensus 206 ~s~s~d~~i~iwd~~~-~~~~~~~~~~----~~~v~~l~~~~~~~~l~s~~-------~d~~v~vwd~~~~~~~~~~~~~ 273 (406)
+-. .+..|.-|++.. ..+.+.+.-| ...|..-..+++.++++..| ..|.+.+|..... ..+.+.||
T Consensus 120 ~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegh 197 (1630)
T 1xi4_A 120 ALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGH 197 (1630)
T ss_pred EEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHh
Confidence 322 245799999963 2333444333 34566677788888876544 3477888887543 23345566
Q ss_pred CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeC---CCcEEEEECCCC---eEEE-------EEe--CCCcCEE
Q psy226 274 DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR---DKTIKLWDVGSG---SLLF-------TLI--GHDNWVR 338 (406)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~i~lwd~~~~---~~~~-------~~~--~h~~~v~ 338 (406)
...-..+...... .....+..+.. .+.+.|-++... ...+ .+. ...+...
T Consensus 198 a~~F~~~~~~~~~---------------~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv 262 (1630)
T 1xi4_A 198 AASFAQFKMEGNA---------------EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV 262 (1630)
T ss_pred HhhhheeccCCCC---------------CCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcce
Confidence 5433222211100 01112222222 256777777432 1111 111 1133455
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee
Q psy226 339 GVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372 (406)
Q Consensus 339 ~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l 372 (406)
++..|+.-..+..-..-|.|+++|+.++.++..-
T Consensus 263 ~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEEeccccCEEEEEecCceEEEEecccchhhhhc
Confidence 6777777777888888999999999999876543
No 338
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.74 E-value=0.86 Score=39.70 Aligned_cols=243 Identities=12% Similarity=0.037 Sum_probs=116.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~-~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
.|..|+......+++ . ||.|..|-... +++-. -......|..++....- .++. . ||.|..|-......+..-
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~-p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTM-PAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSC-CGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCC-CccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 456666554333333 4 89999997543 22211 11123367777765432 2333 4 899999965432111000
Q ss_pred ecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccc
Q psy226 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET 266 (406)
Q Consensus 187 ~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 266 (406)
..-...|..++.... +.+.-. ||.|..|-....-.+.........|..++...+. .+.-. ||.|..|-......
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTST
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCC
Confidence 011235666666533 333334 8999999654321111111122346666654333 33333 78998886543222
Q ss_pred eeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC-CeEEEEEeCCCcCEEEEEEcCC
Q psy226 267 KAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS-GSLLFTLIGHDNWVRGVTFHPG 345 (406)
Q Consensus 267 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~-~~~~~~~~~h~~~v~~l~~s~~ 345 (406)
+..-......|..++-.. ...++. .||.|..|-... +++- ........|..|+-...
T Consensus 172 lg~p~~~~~~v~~i~~G~-------------------~hs~al--~~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~ 229 (282)
T 3qhy_B 172 TTVPAEAQSGVDDVAGGI-------------------FHSLAL--KDGKVIAWGDNRYKQTT-VPTEALSGVSAIASGEW 229 (282)
T ss_dssp TSCCGGGGSSEEEEEECS-------------------SEEEEE--ETTEEEEEECCTTSTTC-CCGGGGSSCCEEEECSS
T ss_pred CCCceecCCCeEEEEecC-------------------CEEEEE--ECCeEEEEECCCCCCCC-CCcccCCCceEEEcCCC
Confidence 110000112344443221 122333 589999997543 2211 00111234666665443
Q ss_pred CCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCCCCEEE
Q psy226 346 GKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVV 392 (406)
Q Consensus 346 g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~~~~l~ 392 (406)
-. ++. . ||.|+.|-.....++... ..|.+++-.....+.+
T Consensus 230 h~-~al-~-~g~v~~wG~n~~gq~~v~----~~v~~iaaG~~h~~al 269 (282)
T 3qhy_B 230 YS-LAL-K-NGKVIAWGSSRTAPSSVQ----SGVSSIEAGPNAAYAL 269 (282)
T ss_dssp CE-EEE-E-TTEEEEESTTCCCCGGGS----SCEEEEEECSSCEEEE
T ss_pred EE-EEE-E-CCEEEEecCCCCccccCC----CCcEEEEECcCeEEEE
Confidence 33 333 3 999999976554333321 2466666655544433
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.54 E-value=1.1 Score=39.40 Aligned_cols=144 Identities=10% Similarity=0.014 Sum_probs=71.4
Q ss_pred cCCCCEEEEEeC----CC-------cEEEEEcCCCcEEEEec--ccccCeeeEEECCCCCEEEEEeCC-------CcEEE
Q psy226 115 HPVFSLMASCSE----DA-------TIRLWDYETGEYERALH--GHLDSVQDIAFDQSGKLLVSCSAD-------MSLKL 174 (406)
Q Consensus 115 ~p~~~~latgs~----dg-------~v~vwd~~~~~~~~~~~--~h~~~V~~l~~~~~g~~l~sgs~d-------~~i~v 174 (406)
..++.+++.|+. ++ .+.+||..+.+....-. .....-..+.+ ++.+.+.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 345677777773 12 17788888876544311 11111112222 56677777653 35778
Q ss_pred EeCCCCeEEEE--EecCCcceEEEEEecCCCEEEEEeC------CCcEEEEEcCCCeEEEE--eecCCccEEEEEECCCC
Q psy226 175 WDMSTYQCLKT--MQGHDHNVTGVAFLPNSDFVLSASR------DKTIKMWEVATGYCVKT--LTGHREWVRQIKVSPDG 244 (406)
Q Consensus 175 wd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~------d~~i~iwd~~~~~~~~~--~~~~~~~v~~l~~~~~~ 244 (406)
||..+.+-... +......- +++. .++.+++.|+. -..+.+||..+..-... +.........+.+ ++
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~ 207 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KG 207 (318)
T ss_dssp EETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred EeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CC
Confidence 88877553321 11111111 1222 35666666653 23588999887653322 1111111122222 56
Q ss_pred CEEEEEeCC-----CeEEEEeCCCc
Q psy226 245 TLLASCSND-----HTARVWSLATK 264 (406)
Q Consensus 245 ~~l~s~~~d-----~~v~vwd~~~~ 264 (406)
++++.|+.+ ..+.+||+.+.
T Consensus 208 ~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 208 KIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp EEEEEEEEETTEEEEEEEEEETTTC
T ss_pred EEEEEcCcCCCCccceEEEEECCCC
Confidence 677777643 24567776553
No 340
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.46 E-value=1.7 Score=40.74 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=59.2
Q ss_pred CccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccce--eEEec------CCceEEEEEeCCCCCccccccccCCCCCCCC
Q psy226 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRG------HDHTVECVAWAPGVASESISEAAGRPPGQGG 303 (406)
Q Consensus 232 ~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~--~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (406)
-.....|+|.|+|+++++-...+.|++++..++... ..+.. .......++++|+... +
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~--------------~ 91 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKN--------------N 91 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTT--------------S
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCc--------------C
Confidence 345678999999997777655557888876443321 11111 2344567888875321 2
Q ss_pred CCEEEEEeC------------CCcEEEEECCCC-------eEEEE-EeC-CCcCEEEEEEcCCCCEEEEEeC
Q psy226 304 GPYLATGSR------------DKTIKLWDVGSG-------SLLFT-LIG-HDNWVRGVTFHPGGKYLVSCGD 354 (406)
Q Consensus 304 ~~~l~s~~~------------d~~i~lwd~~~~-------~~~~~-~~~-h~~~v~~l~~s~~g~~l~sgs~ 354 (406)
+.+.++-+. ...|.-|+...+ +.+.. +.. .......|+|.|+|.+.++.++
T Consensus 92 g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 92 PYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 322333221 123444443221 12222 221 1235789999999988777553
No 341
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.37 E-value=1 Score=37.53 Aligned_cols=136 Identities=13% Similarity=0.095 Sum_probs=77.7
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCc---E--EEEeccc--ccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeE------
Q psy226 116 PVFSLMASCSEDATIRLWDYETGE---Y--ERALHGH--LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC------ 182 (406)
Q Consensus 116 p~~~~latgs~dg~v~vwd~~~~~---~--~~~~~~h--~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~------ 182 (406)
|...+|++...| +|++=-...+. . ..+..++ -..+.+++|+|+|.+-++ .+|.+.-.+..+.+.
T Consensus 2 ~~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s 78 (236)
T 1tl2_A 2 GGESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR 78 (236)
T ss_dssp CCCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH
T ss_pred CcceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc
Confidence 345667777777 55543333332 1 0011122 347889999999886555 667665555543110
Q ss_pred EEEE-e-cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeE-------EEEeecCCccEEEEEECCCCCEEEEEeCC
Q psy226 183 LKTM-Q-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC-------VKTLTGHREWVRQIKVSPDGTLLASCSND 253 (406)
Q Consensus 183 ~~~~-~-~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~-------~~~~~~~~~~v~~l~~~~~~~~l~s~~~d 253 (406)
-..+ . +.. ...++.|.|+|.+.++ .||.|.-++-.+... ...-.+-=..+..|.+.|+|.+.+.. |
T Consensus 79 ~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 79 AKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp CEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--T
T ss_pred ccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--C
Confidence 1111 0 112 2578899999987777 568887776533111 11111111356899999999988777 7
Q ss_pred CeEEEE
Q psy226 254 HTARVW 259 (406)
Q Consensus 254 ~~v~vw 259 (406)
+.++-.
T Consensus 154 g~lyr~ 159 (236)
T 1tl2_A 154 QQFYKA 159 (236)
T ss_dssp TEEEEE
T ss_pred CcEEec
Confidence 775443
No 342
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.18 E-value=3 Score=41.87 Aligned_cols=260 Identities=10% Similarity=0.115 Sum_probs=143.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEE
Q psy226 107 SPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~ 186 (406)
..|.++...+++. |..|..+| +..||..+.++..........|.++.. .+| .|..|+.+ -+..+|..+.+.. .+
T Consensus 63 ~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~ 136 (758)
T 3ott_A 63 TRIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SF 136 (758)
T ss_dssp SCEEEEEEETTTE-EEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EE
T ss_pred ceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-Ee
Confidence 4688888777664 44555555 788998887654311112234766654 345 45556665 5778888765533 22
Q ss_pred e-----cCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEeec-----CCccEEEEEECCCCCEEEEEeCCCeE
Q psy226 187 Q-----GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG-----HREWVRQIKVSPDGTLLASCSNDHTA 256 (406)
Q Consensus 187 ~-----~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~s~~~d~~v 256 (406)
. .....|.++...+++.+.+ |+.+ -+..+|..++........ ....|.++...+++..|..|+. +.+
T Consensus 137 ~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl 213 (758)
T 3ott_A 137 DTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYL 213 (758)
T ss_dssp CHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEE
T ss_pred ccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCC
Confidence 1 1134578887777776554 4544 477788776643221111 1224788888877776655664 467
Q ss_pred EEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC----
Q psy226 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG---- 332 (406)
Q Consensus 257 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~---- 332 (406)
..+|..+.............|.++...+ .|. |..|+.+ -+.+++..++........
T Consensus 214 ~~~~~~~~~~~~~~~l~~~~i~~i~~d~------------------~g~-lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~ 273 (758)
T 3ott_A 214 FQYFPSTGQIKQTEAFHNNSIKSLALDG------------------NGD-LLAGTDN-GLYVYHNDTTPLQHIIHDSRNI 273 (758)
T ss_dssp EEEETTTTEEEEEEEEEEEEEEEEEECT------------------TCC-EEEEETT-EEEEECCTTSCCEEECCCTTCT
T ss_pred eEEcCCCCeEEeccCCCCCeEEEEEEcC------------------CCC-EEEEeCC-ceeEEecCCCcEEEEEcCCCCc
Confidence 8888765432211111122355554332 233 4455544 578888776543221110
Q ss_pred ---CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeec-------cccceEEEEEEeCCCCEEEEeeCCCeE
Q psy226 333 ---HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE-------AHSHFVTSLDFHRAHPYVVTGSVDKTV 400 (406)
Q Consensus 333 ---h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~-------~h~~~v~~l~~~~~~~~l~sgs~Dg~v 400 (406)
..+.|.++..+.+|..-+ |...| +.+..... ....+. .....|.++.-.+++.+-+ |+.+|..
T Consensus 274 ~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~Gl~ 346 (758)
T 3ott_A 274 QSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANGLI 346 (758)
T ss_dssp TSCSCSCEEEEEECTTCCEEE-EESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTEEE
T ss_pred CcCCcCeEEEEEEcCCCCEEE-EeCCc-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCcce
Confidence 134589999888887655 44556 54443321 111111 1234688888888877555 3445533
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.03 E-value=1.5 Score=43.67 Aligned_cols=149 Identities=8% Similarity=0.072 Sum_probs=82.3
Q ss_pred CCCCEEEEEeCC----CcEEEEEcCCCcEEEEe-c-----cccc-CeeeEEECC-CCCEEEEEeCC------CcEEEEeC
Q psy226 116 PVFSLMASCSED----ATIRLWDYETGEYERAL-H-----GHLD-SVQDIAFDQ-SGKLLVSCSAD------MSLKLWDM 177 (406)
Q Consensus 116 p~~~~latgs~d----g~v~vwd~~~~~~~~~~-~-----~h~~-~V~~l~~~~-~g~~l~sgs~d------~~i~vwd~ 177 (406)
.++.+++.|+.+ ..+.+||..+++....- . .... .-.+++..+ ++.+++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777777754 46889998888765433 2 0111 112233333 67777777754 35788898
Q ss_pred CCCeEEEE--EecCCcceEEEEEecCCCEEEEEeCCC--cEEEEEcCCCeEEEEe-----ecCCccEEEEEECCC-CCEE
Q psy226 178 STYQCLKT--MQGHDHNVTGVAFLPNSDFVLSASRDK--TIKMWEVATGYCVKTL-----TGHREWVRQIKVSPD-GTLL 247 (406)
Q Consensus 178 ~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d~--~i~iwd~~~~~~~~~~-----~~~~~~v~~l~~~~~-~~~l 247 (406)
.+.+.... +...... .+++...++..++.|+.++ .+.+||..+..-...- .........+.+..+ +.++
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 87543221 1111111 2233324777888887655 6899998876532221 111122233555554 6677
Q ss_pred EEEeC--C-----CeEEEEeCCCcc
Q psy226 248 ASCSN--D-----HTARVWSLATKE 265 (406)
Q Consensus 248 ~s~~~--d-----~~v~vwd~~~~~ 265 (406)
+.|+. + ..+.+||+.+..
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EECCcCCCCCeeeCcEEEEEccCCc
Confidence 77765 2 357788887654
No 344
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.99 E-value=0.2 Score=44.91 Aligned_cols=150 Identities=11% Similarity=-0.010 Sum_probs=83.0
Q ss_pred CEEEEEeCCCcEEEEEcCCCeEEEEeecC-CccEEEEEE--CC-CCCEEEEE-eCCCeEEEEeCCCccceeEEec----C
Q psy226 203 DFVLSASRDKTIKMWEVATGYCVKTLTGH-REWVRQIKV--SP-DGTLLASC-SNDHTARVWSLATKETKAELRG----H 273 (406)
Q Consensus 203 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-~~~v~~l~~--~~-~~~~l~s~-~~d~~v~vwd~~~~~~~~~~~~----~ 273 (406)
+.++.++.||.|.-.|..+|+....+... ..++....- .+ ++..++.. +.||.+..++..++.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47889999999999999999998888654 112211110 01 22333333 5899999999876633322211 0
Q ss_pred CceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeCCCc-C------EEEEE---Ec
Q psy226 274 DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDN-W------VRGVT---FH 343 (406)
Q Consensus 274 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~h~~-~------v~~l~---~s 343 (406)
..++.. .-.|-.. .+.....+..+++|+.++.+.-.|+++|+.+..+..... . ..|-. +.
T Consensus 91 ~SP~~~-~~~pvv~---------~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~ 160 (339)
T 2be1_A 91 TSPLHL-KTNIVVN---------DSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIK 160 (339)
T ss_dssp TCSEEE-ECC-------------------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC----------------
T ss_pred cccccc-CCCceee---------cccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccc
Confidence 011110 0000000 000000245788999999999999999999988864311 0 00111 10
Q ss_pred --CCCCEEEEEeCCCeEEEEe
Q psy226 344 --PGGKYLVSCGDDKTLRVWD 362 (406)
Q Consensus 344 --~~g~~l~sgs~d~~i~vwd 362 (406)
..+..|+.|..+..+.+.+
T Consensus 161 ~d~~~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 161 LQECENMIVIGKTIFELGIHS 181 (339)
T ss_dssp ----CCEEEEEEEEEECEECC
T ss_pred cccCCCeEEEecceEEEEEEC
Confidence 1245677777777777766
No 345
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.98 E-value=1 Score=39.22 Aligned_cols=219 Identities=12% Similarity=0.032 Sum_probs=103.0
Q ss_pred cCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEe
Q psy226 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228 (406)
Q Consensus 149 ~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 228 (406)
..|..++.... ..++. . ||.|..|-......+..-......|..++.... ..++. . ||.|..|-....-.+..-
T Consensus 24 ~~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~-hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 24 SGVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY-HSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SSCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS-EEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC-EEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 35777776543 22333 4 899999965432111000011234656655432 23333 4 899998865432111100
Q ss_pred ecCCccEEEEEECCCCCEEEEEeCCCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEE
Q psy226 229 TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA 308 (406)
Q Consensus 229 ~~~~~~v~~l~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 308 (406)
..-...|..++...+ +.+.-. ||.|..|-......+.........|..++-. ..+.+
T Consensus 98 ~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G--------------------~~~~~ 154 (282)
T 3qhy_B 98 AEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGG--------------------VYTAL 154 (282)
T ss_dssp GGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEEC--------------------SSEEE
T ss_pred cccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcc--------------------cCEEE
Confidence 011235666665443 344445 8999999654322211111112234444322 11222
Q ss_pred EEeCCCcEEEEECCC-CeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEeCC
Q psy226 309 TGSRDKTIKLWDVGS-GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRA 387 (406)
Q Consensus 309 s~~~d~~i~lwd~~~-~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~~~ 387 (406)
.-. ||.|..|-... +++- ....-...|..++-...- .++. .||.|+.|-....-.+..-......|..++-...
T Consensus 155 ~l~-~G~v~~wG~n~~gqlg-~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~ 229 (282)
T 3qhy_B 155 AVK-NGGVIAWGDNYFGQTT-VPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW 229 (282)
T ss_dssp EEE-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS
T ss_pred EEE-CCEEEEecCCCCCCCC-CceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC
Confidence 233 78899987543 2211 001112457777654332 2333 5999999976542221110011123556665544
Q ss_pred CCEEEEeeCCCeEEEee
Q psy226 388 HPYVVTGSVDKTVKVWE 404 (406)
Q Consensus 388 ~~~l~sgs~Dg~v~iw~ 404 (406)
..+.++ ||.|..|-
T Consensus 230 h~~al~---~g~v~~wG 243 (282)
T 3qhy_B 230 YSLALK---NGKVIAWG 243 (282)
T ss_dssp CEEEEE---TTEEEEES
T ss_pred EEEEEE---CCEEEEec
Confidence 433333 88888874
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.66 E-value=1.4 Score=47.02 Aligned_cols=218 Identities=13% Similarity=0.155 Sum_probs=114.5
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCC-eEEEEEecC-
Q psy226 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY-QCLKTMQGH- 189 (406)
Q Consensus 112 v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~-~~~~~~~~h- 189 (406)
...||..+.+|-=. ..++.|+|+++....+...- ..+|.--.|-.... |+-.+ +..|.-|++... .+.+.+..|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 34677777777654 68999999998765554443 34566666654433 33222 457999999632 233333323
Q ss_pred ---CcceEEEEEecCCCEEEE-Ee------CCCcEEEEEcCCCeEEEEeecCCccEEEEEEC--CC-CCEEEEEeC---C
Q psy226 190 ---DHNVTGVAFLPNSDFVLS-AS------RDKTIKMWEVATGYCVKTLTGHREWVRQIKVS--PD-GTLLASCSN---D 253 (406)
Q Consensus 190 ---~~~v~~~~~~p~~~~l~s-~s------~d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~--~~-~~~l~s~~~---d 253 (406)
...|..-..+++.+.++. |- -.|.+.+|....+ ..+.+.||......+.+. +. ..+|+.+.. .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 345666666777775443 32 3477888887654 234556665443333332 11 223333322 3
Q ss_pred CeEEEEeCCCc-cceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeEEEEEeC
Q psy226 254 HTARVWSLATK-ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332 (406)
Q Consensus 254 ~~v~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~~~~~~~ 332 (406)
+.++|.++... .... ........+-|.|....+...... ....-..+..-+.-|.|.+||+.+|.+++.-.-
T Consensus 226 ~kLhi~Ei~~~~~~~~---~f~kk~~~~~~~~~~~~Dfpv~~~----vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQ---PFPKKAVDVFFPPEAQNDFPVAMQ----ISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (1630)
T ss_pred ceEEEEecCCCccCCC---CCccccccccCCcccccCcceEEE----eccccCEEEEEecCceEEEEecccchhhhhccc
Confidence 68888888543 1111 111112233343322111100000 011223455667789999999999988765443
Q ss_pred CCcCEEEEE
Q psy226 333 HDNWVRGVT 341 (406)
Q Consensus 333 h~~~v~~l~ 341 (406)
....|...+
T Consensus 299 s~~~iF~~~ 307 (1630)
T 1xi4_A 299 SGETIFVTA 307 (1630)
T ss_pred cCCceEEec
Confidence 333343333
No 347
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.16 E-value=5.2 Score=40.06 Aligned_cols=268 Identities=11% Similarity=0.091 Sum_probs=147.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy226 108 PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 108 ~V~~v~~~p~~~~latgs~dg~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
.|.++...+++..|..|.. +-+..+|..++++..........|.++....+|.+.+. +.+ -+.+++..+.+......
T Consensus 192 ~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~~~~~~~~ 268 (758)
T 3ott_A 192 FVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTTPLQHIIH 268 (758)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTSCCEEECC
T ss_pred eeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCCcEEEEEc
Confidence 4888888877765554553 45888898877654322222346888988888876654 444 47788877654322111
Q ss_pred c-------CCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEee-----cCCccEEEEEECCCCCEEEEEeCCCe
Q psy226 188 G-------HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT-----GHREWVRQIKVSPDGTLLASCSNDHT 255 (406)
Q Consensus 188 ~-------h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----~~~~~v~~l~~~~~~~~l~s~~~d~~ 255 (406)
. ....|.++....+|.+ -.|+..| +.+............. .....|.++..+++|.+.+. +.+ -
T Consensus 269 ~~~~~~~l~~~~i~~i~~D~~g~l-WiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~-G 344 (758)
T 3ott_A 269 DSRNIQSLTNNIIWNIFADQEHNI-WLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GAN-G 344 (758)
T ss_dssp CTTCTTSCSCSCEEEEEECTTCCE-EEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETT-E
T ss_pred CCCCcCcCCcCeEEEEEEcCCCCE-EEEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCC-c
Confidence 0 1235888877766664 4455556 5444332211111111 11346888888888876554 455 4
Q ss_pred EEEEeCCCcc--ceeEEec-------CCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCCCeE
Q psy226 256 ARVWSLATKE--TKAELRG-------HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSL 326 (406)
Q Consensus 256 v~vwd~~~~~--~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~~~~ 326 (406)
+..++..++. ....+.. ....|.++.-.. .|. |-.|+ ++-|..||..+++.
T Consensus 345 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~------------------~g~-lWigt-~~GL~~~~~~~~~~ 404 (758)
T 3ott_A 345 LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDK------------------EQQ-LWIAT-DGSINRYDYATRQF 404 (758)
T ss_dssp EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECT------------------TSC-EEEEE-TTEEEEEETTTTEE
T ss_pred ceeecccccccceeEEeccCCcCCCCCCCceEEEEECC------------------CCC-EEEEe-CCcHhhcCcCCCcE
Confidence 6666654321 1111110 012244443222 233 44455 45689999888765
Q ss_pred EEEE-eC-----CCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC-----ccc---eeec---c-ccceEEEEEEeCCC
Q psy226 327 LFTL-IG-----HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK-----RNM---KTLE---A-HSHFVTSLDFHRAH 388 (406)
Q Consensus 327 ~~~~-~~-----h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~-----~~~---~~l~---~-h~~~v~~l~~~~~~ 388 (406)
.... .. ....|.++...++|...+ |+..+-|.++|..+. ... ..+. + ....|.++...+++
T Consensus 405 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g 483 (758)
T 3ott_A 405 IHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEG 483 (758)
T ss_dssp EEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTS
T ss_pred EEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCC
Confidence 4321 11 234688888888876555 555555778875421 111 1111 1 12358999999998
Q ss_pred CEEE-EeeCCCeEEEee
Q psy226 389 PYVV-TGSVDKTVKVWE 404 (406)
Q Consensus 389 ~~l~-sgs~Dg~v~iw~ 404 (406)
.+-+ .|+..| +..+|
T Consensus 484 ~lWi~~~t~~G-l~~~d 499 (758)
T 3ott_A 484 NVWVLLYNNKG-IDKIN 499 (758)
T ss_dssp CEEEEETTCSS-EEEEE
T ss_pred CEEEEccCCCC-cEEEe
Confidence 8766 344444 55555
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.16 E-value=2.5 Score=37.85 Aligned_cols=52 Identities=10% Similarity=0.093 Sum_probs=29.3
Q ss_pred CCCEEEEEeC-C---------CcEEEEEcCCCcEEEEeccc-ccCee-eEEECCCCCEEEEEeCC
Q psy226 117 VFSLMASCSE-D---------ATIRLWDYETGEYERALHGH-LDSVQ-DIAFDQSGKLLVSCSAD 169 (406)
Q Consensus 117 ~~~~latgs~-d---------g~v~vwd~~~~~~~~~~~~h-~~~V~-~l~~~~~g~~l~sgs~d 169 (406)
++.+++.|+. + ..+.+||..+.+....-... ..... +++. .++++++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 128 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVN 128 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCC
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcC
Confidence 4566776765 2 46899999888755432211 11111 1222 467777888754
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.51 E-value=4.1 Score=40.48 Aligned_cols=147 Identities=12% Similarity=0.100 Sum_probs=76.1
Q ss_pred CCCEEEEEeCCC------cEEEEEcCCCcEEEEeccccc-CeeeEEECCCCCEEEEEeCCC--cEEEEeCCCCeEEEEEe
Q psy226 117 VFSLMASCSEDA------TIRLWDYETGEYERALHGHLD-SVQDIAFDQSGKLLVSCSADM--SLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 117 ~~~~latgs~dg------~v~vwd~~~~~~~~~~~~h~~-~V~~l~~~~~g~~l~sgs~d~--~i~vwd~~~~~~~~~~~ 187 (406)
++.+++.|+.++ .+.+||..+.+....-..... .-.+++.-.++.+++.|+.++ .+.+||..+.+-. .+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~-~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK-DVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE-ECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE-Ecc
Confidence 455666665432 467788777655433111111 112233324778888887654 6899999876532 222
Q ss_pred c------CCcceEEEEEecC-CCEEEEEeC--C-----CcEEEEEcCCCeE-----EEEeec---CCccEEEEEECCCCC
Q psy226 188 G------HDHNVTGVAFLPN-SDFVLSASR--D-----KTIKMWEVATGYC-----VKTLTG---HREWVRQIKVSPDGT 245 (406)
Q Consensus 188 ~------h~~~v~~~~~~p~-~~~l~s~s~--d-----~~i~iwd~~~~~~-----~~~~~~---~~~~v~~l~~~~~~~ 245 (406)
. ......++.+..+ +..++.|+. + ..+.+||+.+... -..+.. ....-.+++...++.
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~ 609 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRK 609 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCE
Confidence 1 1122233555555 556666765 2 3588899887651 111211 111111222333366
Q ss_pred EEEEEeCC--------CeEEEEeCCCc
Q psy226 246 LLASCSND--------HTARVWSLATK 264 (406)
Q Consensus 246 ~l~s~~~d--------~~v~vwd~~~~ 264 (406)
+++.|+.+ ..+.+||+.+.
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCC
Confidence 77777643 34677776553
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.41 E-value=6.9 Score=34.26 Aligned_cols=194 Identities=9% Similarity=0.043 Sum_probs=96.3
Q ss_pred CCCCEEEEEe--CCCcEEEEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeCC--------------CcEEEEEcCC
Q psy226 158 QSGKLLVSCS--ADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD--------------KTIKMWEVAT 221 (406)
Q Consensus 158 ~~g~~l~sgs--~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d--------------~~i~iwd~~~ 221 (406)
.+|..|+-.. .++.|...+..... ...+... .+--++++++.|+-++.. ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 3555555443 24455555554332 2222221 134567888887766543 3566677765
Q ss_pred CeEEEEeecCCccEEEEEECCCCCEEEEEe--C--CCeEEEEeCCCccceeEEecCCceEEEEEeCCCCCccccccccCC
Q psy226 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCS--N--DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGR 297 (406)
Q Consensus 222 ~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~--~--d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 297 (406)
+.... +.... ...++++++.|+-.. . ...|..-++.... ...+..+.. ..+.|
T Consensus 98 ~~~~~-l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~------------- 154 (302)
T 3s25_A 98 HGSTV-LDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNT------------- 154 (302)
T ss_dssp CCCEE-EECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEE-------------
T ss_pred CcceE-eecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeE-------------
Confidence 54322 22211 235677888887665 2 3445555555333 233333221 11111
Q ss_pred CCCCCCCCEEEEEe-CCCcEEEEECCCCeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCC--CeEEEEeCCCCccceeecc
Q psy226 298 PPGQGGGPYLATGS-RDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDD--KTLRVWDTANKRNMKTLEA 374 (406)
Q Consensus 298 ~~~~~~~~~l~s~~-~d~~i~lwd~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d--~~i~vwd~~~~~~~~~l~~ 374 (406)
.+..|+-.+ ...+|..-++..+.....+.+ .. ...++|++.+|+-...+ ..|..-++.... ...|..
T Consensus 155 -----~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~ 224 (302)
T 3s25_A 155 -----SDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE 224 (302)
T ss_dssp -----ETTEEEEECTTTCCEEEEETTTTEEEEEECS---CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC
T ss_pred -----ECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC
Confidence 233444333 356788888876654433332 12 23456999988765543 356666665433 333432
Q ss_pred ccceEEEEEEeCCCCEEEE
Q psy226 375 HSHFVTSLDFHRAHPYVVT 393 (406)
Q Consensus 375 h~~~v~~l~~~~~~~~l~s 393 (406)
. .+. .|+|++..|.-
T Consensus 225 ~--~~~--~~~~~g~~Iy~ 239 (302)
T 3s25_A 225 A--NIE--HYNVYGSLIFY 239 (302)
T ss_dssp S--CEE--EEEEETTEEEE
T ss_pred C--Ccc--eEEECCCEEEE
Confidence 1 222 25566665543
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=90.70 E-value=9.4 Score=34.60 Aligned_cols=47 Identities=4% Similarity=-0.017 Sum_probs=27.7
Q ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEeCCCCccceeeccccceEEEEEEe
Q psy226 338 RGVTFHPG-GKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385 (406)
Q Consensus 338 ~~l~~s~~-g~~l~sgs~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~~ 385 (406)
..++++|. ...|+.++.++.|..- ...++.-..+..+-..+.+|+|.
T Consensus 344 ~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp BSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEEEEe
Confidence 35788874 3456667666665533 23455555555444457788775
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.68 E-value=3.8 Score=39.12 Aligned_cols=100 Identities=12% Similarity=0.138 Sum_probs=64.9
Q ss_pred eeeEEECCCCCEEEEEe-CCCcEEEEeCCCC------eE-------EEEEecCCcceEEEEEecCCCEEEEEeCCCcEEE
Q psy226 151 VQDIAFDQSGKLLVSCS-ADMSLKLWDMSTY------QC-------LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216 (406)
Q Consensus 151 V~~l~~~~~g~~l~sgs-~d~~i~vwd~~~~------~~-------~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~i 216 (406)
...+.++|||++++.++ .+.++.++|+.+. +. ..... -.-.-...+|.++|+...+..-|..|.-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 45688999999887766 4789999998642 11 11111 1223456889999966666778999999
Q ss_pred EEcCCC----------eEEEEeecCCccEEEE-----EECCCCCEEEEEe
Q psy226 217 WEVATG----------YCVKTLTGHREWVRQI-----KVSPDGTLLASCS 251 (406)
Q Consensus 217 wd~~~~----------~~~~~~~~~~~~v~~l-----~~~~~~~~l~s~~ 251 (406)
|++... ..+..+.-|-.+-... .-.|+|++|++..
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 998653 3444554443322211 1257899999875
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=86.76 E-value=20 Score=33.43 Aligned_cols=103 Identities=15% Similarity=0.177 Sum_probs=58.7
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCc---EEEEec-----c----cccCeeeEEECCC----CCEEEEEeC--
Q psy226 108 PVIKVIFHPVFS-LMASCSEDATIRLWDYETGE---YERALH-----G----HLDSVQDIAFDQS----GKLLVSCSA-- 168 (406)
Q Consensus 108 ~V~~v~~~p~~~-~latgs~dg~v~vwd~~~~~---~~~~~~-----~----h~~~V~~l~~~~~----g~~l~sgs~-- 168 (406)
.-..|+|.|++. .|+.+...|.|++++..... ....+. + .......|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 346889999996 45555678999999754321 111111 1 1346778999996 433333221
Q ss_pred C----------CcEEEEeCCC----------CeEEEEEe--cCCcceEEEEEecCCCEEEEEeC
Q psy226 169 D----------MSLKLWDMST----------YQCLKTMQ--GHDHNVTGVAFLPNSDFVLSASR 210 (406)
Q Consensus 169 d----------~~i~vwd~~~----------~~~~~~~~--~h~~~v~~~~~~p~~~~l~s~s~ 210 (406)
+ ..|.-|.+.. .+.+..+. ...+....|+|.|||.+.++.+.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 1 1343455431 22333332 23456789999999987666544
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.07 E-value=25 Score=32.85 Aligned_cols=106 Identities=14% Similarity=0.196 Sum_probs=61.2
Q ss_pred cCeeeEEECCCCC-EEEEEeCCCcEEEEeCCCC---eEEEEEe-----c----CCcceEEEEEecC----CCEEEEEeC-
Q psy226 149 DSVQDIAFDQSGK-LLVSCSADMSLKLWDMSTY---QCLKTMQ-----G----HDHNVTGVAFLPN----SDFVLSASR- 210 (406)
Q Consensus 149 ~~V~~l~~~~~g~-~l~sgs~d~~i~vwd~~~~---~~~~~~~-----~----h~~~v~~~~~~p~----~~~l~s~s~- 210 (406)
..-..|+|.|+|. +|+++...|.|++++.... ..+..+. + .......|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4456899999996 5556678899999975422 1112221 1 1356789999996 333333332
Q ss_pred -C----------CcEEEEEcCC----------CeEEEEee--cCCccEEEEEECCCCCEEEEEeCCC
Q psy226 211 -D----------KTIKMWEVAT----------GYCVKTLT--GHREWVRQIKVSPDGTLLASCSNDH 254 (406)
Q Consensus 211 -d----------~~i~iwd~~~----------~~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~d~ 254 (406)
+ ..|.-|.+.. .+.+..+. .....-..|+|.|||.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1333355432 12232322 1223467899999998888776543
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.23 E-value=10 Score=39.14 Aligned_cols=38 Identities=34% Similarity=0.538 Sum_probs=32.5
Q ss_pred CeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy226 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 150 ~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46677777888899999999999999999999987653
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.71 E-value=9.1 Score=39.55 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=32.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceee
Q psy226 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l 372 (406)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677788888899999999999999999998877654
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=77.05 E-value=61 Score=32.13 Aligned_cols=232 Identities=9% Similarity=0.053 Sum_probs=116.9
Q ss_pred EEEE-EcCCCCEEEEE-eC----CCcEEEEEcCCCcEEE-Eec-cccc------CeeeEEECCCCCEEEEE---------
Q psy226 110 IKVI-FHPVFSLMASC-SE----DATIRLWDYETGEYER-ALH-GHLD------SVQDIAFDQSGKLLVSC--------- 166 (406)
Q Consensus 110 ~~v~-~~p~~~~latg-s~----dg~v~vwd~~~~~~~~-~~~-~h~~------~V~~l~~~~~g~~l~sg--------- 166 (406)
..+. ++|++++++.+ |. -..++++|+.+++++. .+. .-.. ....++|..++.++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 3445 89999877754 32 3369999999998652 111 0000 11334776444444431
Q ss_pred -eCCCcEEEEeCCCCe--EEEEEecCCcce-EEEEEecCCC-----EEEEEeCC---CcEEEEEcCC--CeEEEEeecCC
Q psy226 167 -SADMSLKLWDMSTYQ--CLKTMQGHDHNV-TGVAFLPNSD-----FVLSASRD---KTIKMWEVAT--GYCVKTLTGHR 232 (406)
Q Consensus 167 -s~d~~i~vwd~~~~~--~~~~~~~h~~~v-~~~~~~p~~~-----~l~s~s~d---~~i~iwd~~~--~~~~~~~~~~~ 232 (406)
+.-..|+.|.+.+.. -...+.+....+ .+...++++. .+++.+.+ ..+.+.|... +.. ..+....
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCC
Confidence 112468888876532 222333333333 2344455655 24444423 3455556542 332 2222222
Q ss_pred ccEEEEEECCCCCEEEEE----------eCCCeEEEEeCCCcc-------ceeE-Ee-cCCceEEEEEeCCCCCcccccc
Q psy226 233 EWVRQIKVSPDGTLLASC----------SNDHTARVWSLATKE-------TKAE-LR-GHDHTVECVAWAPGVASESISE 293 (406)
Q Consensus 233 ~~v~~l~~~~~~~~l~s~----------~~d~~v~vwd~~~~~-------~~~~-~~-~~~~~v~~~~~~~~~~~~~~~~ 293 (406)
.. .+....++.+++.. ...+.|.+.|+.+.. .... +. .....+..+.|..
T Consensus 291 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------- 359 (711)
T 4hvt_A 291 DA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK--------- 359 (711)
T ss_dssp TC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS---------
T ss_pred cc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC---------
Confidence 21 12223355444422 245678888886632 1222 22 2234566777664
Q ss_pred ccCCCCCCCCCCEEEEEeCCCc--EEEEECCCCe-EEEE---EeCCCcCEEEEEEcCCCC-EEEEEeC---CCeEEEEeC
Q psy226 294 AAGRPPGQGGGPYLATGSRDKT--IKLWDVGSGS-LLFT---LIGHDNWVRGVTFHPGGK-YLVSCGD---DKTLRVWDT 363 (406)
Q Consensus 294 ~~~~~~~~~~~~~l~s~~~d~~--i~lwd~~~~~-~~~~---~~~h~~~v~~l~~s~~g~-~l~sgs~---d~~i~vwd~ 363 (406)
+.++++...++. |.++|+.++. .... +.. ...+..+.+++++. ++++.+. -+.+..+|.
T Consensus 360 ----------~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~ 428 (711)
T 4hvt_A 360 ----------DRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVK 428 (711)
T ss_dssp ----------SCEEEEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred ----------CEEEEEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeC
Confidence 345666667764 6777776664 1222 222 24566677777765 4444443 256777776
Q ss_pred C
Q psy226 364 A 364 (406)
Q Consensus 364 ~ 364 (406)
.
T Consensus 429 ~ 429 (711)
T 4hvt_A 429 T 429 (711)
T ss_dssp T
T ss_pred C
Confidence 5
No 358
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=73.25 E-value=46 Score=28.89 Aligned_cols=140 Identities=7% Similarity=-0.033 Sum_probs=81.0
Q ss_pred EEEcCCCCEEEEEeCC--------------CcEEEEEcCCCcEEEEecccccCeeeEEECCCCCEEEEEe--C--CCcEE
Q psy226 112 VIFHPVFSLMASCSED--------------ATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCS--A--DMSLK 173 (406)
Q Consensus 112 v~~~p~~~~latgs~d--------------g~v~vwd~~~~~~~~~~~~h~~~V~~l~~~~~g~~l~sgs--~--d~~i~ 173 (406)
--+++++..|+-+... ..|+..++..++....... .+..|+++++.|+-.. . +..|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD-----PCIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS-----CEEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC-----CccEEEEeCCEEEEEeecCCCCceEE
Confidence 4468888877766543 3567777776654333221 1236677888888665 2 34555
Q ss_pred EEeCCCCeEEEEEecCCcceEEEEEecCCCEEEEEeC-CCcEEEEEcCCCeEEEEeecCCccEEEEEECCCCCEEEEEeC
Q psy226 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR-DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN 252 (406)
Q Consensus 174 vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~ 252 (406)
..++.... ...+..+.. ..|+|+++.|+-.+. ...|..-++..+.....+.+. .. ..+.|++.+|+-...
T Consensus 133 ~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~---~~-~~~~P~g~~iy~t~~ 203 (302)
T 3s25_A 133 RIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDCN---CY-KPVVLDDTNVYYMDV 203 (302)
T ss_dssp EEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECSC---EE-EEEEEETTEEEEEEG
T ss_pred EEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCCC---cc-ceeeecCCEEEEEEc
Confidence 55665433 334433322 456788888776555 578888888766544433321 11 235588887765553
Q ss_pred C--CeEEEEeCCCcc
Q psy226 253 D--HTARVWSLATKE 265 (406)
Q Consensus 253 d--~~v~vwd~~~~~ 265 (406)
+ ..|..-++....
T Consensus 204 ~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 204 NRDNAIVHVNINNPN 218 (302)
T ss_dssp GGTTEEEEECSSSCC
T ss_pred CCCcEEEEEECCCCC
Confidence 3 356566665443
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.83 E-value=11 Score=39.81 Aligned_cols=38 Identities=34% Similarity=0.538 Sum_probs=31.8
Q ss_pred CeeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEe
Q psy226 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187 (406)
Q Consensus 150 ~V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~ 187 (406)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556666788899999999999999999999987753
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=63.31 E-value=86 Score=28.28 Aligned_cols=156 Identities=10% Similarity=0.074 Sum_probs=94.0
Q ss_pred CCeEEEEEcCCCCEEE--EEeC-------------CCcEEEEEcCCC--cEEEEeccc------ccCeeeEEEC---CC-
Q psy226 107 SPVIKVIFHPVFSLMA--SCSE-------------DATIRLWDYETG--EYERALHGH------LDSVQDIAFD---QS- 159 (406)
Q Consensus 107 ~~V~~v~~~p~~~~la--tgs~-------------dg~v~vwd~~~~--~~~~~~~~h------~~~V~~l~~~---~~- 159 (406)
-.|..+...+.+++=+ +|-. -..|.+||+.+. +.++++.-. .....++.+. +.
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 4577888877666433 3321 225889999999 888776532 2356777776 22
Q ss_pred ---CCEEEEEe-CCCcEEEEeCCCCeEEEEEecC------------------CcceEEEEEecC----CCEEEEEeCCCc
Q psy226 160 ---GKLLVSCS-ADMSLKLWDMSTYQCLKTMQGH------------------DHNVTGVAFLPN----SDFVLSASRDKT 213 (406)
Q Consensus 160 ---g~~l~sgs-~d~~i~vwd~~~~~~~~~~~~h------------------~~~v~~~~~~p~----~~~l~s~s~d~~ 213 (406)
+.+...+. ....|.|+|+.+++..+.+..+ ...+..++++|+ ++.|.-....+.
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~ 246 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI 246 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC
Confidence 34444443 4678999999988766554210 136778888887 566665544432
Q ss_pred EEEEEcCC-----C---eEEEEeecC--CccEEEEEEC-CCCCEEEEEeCCCeEEEEeCCC
Q psy226 214 IKMWEVAT-----G---YCVKTLTGH--REWVRQIKVS-PDGTLLASCSNDHTARVWSLAT 263 (406)
Q Consensus 214 i~iwd~~~-----~---~~~~~~~~~--~~~v~~l~~~-~~~~~l~s~~~d~~v~vwd~~~ 263 (406)
++|-+.+ . ..++.+... ...-..++++ .+|.++++--....|..|+..+
T Consensus 247 -~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 247 -KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred -cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 3343321 1 112222111 1233456675 6788888888889999998764
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=62.62 E-value=26 Score=33.89 Aligned_cols=58 Identities=24% Similarity=0.185 Sum_probs=42.7
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEEcCCCcEEEEecccc-cCeeeEEECCCCCEEEEE
Q psy226 109 VIKVIFHPVFSLMASCSED------------ATIRLWDYETGEYERALHGHL-DSVQDIAFDQSGKLLVSC 166 (406)
Q Consensus 109 V~~v~~~p~~~~latgs~d------------g~v~vwd~~~~~~~~~~~~h~-~~V~~l~~~~~g~~l~sg 166 (406)
.--|+|+|.|.++++-..+ ..+.+.+..+++..+.+.++. ..++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3458899999977765432 235566777788877777664 479999999999887765
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=62.44 E-value=22 Score=37.63 Aligned_cols=38 Identities=24% Similarity=0.485 Sum_probs=31.6
Q ss_pred ceEEEEEecCCCEEEEEeCCCcEEEEEcCCCeEEEEee
Q psy226 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT 229 (406)
Q Consensus 192 ~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 229 (406)
.+.+++..++..++++-+.|+++|+|++.++.++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34456667778899999999999999999999988753
No 363
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.37 E-value=14 Score=36.41 Aligned_cols=36 Identities=17% Similarity=0.401 Sum_probs=28.5
Q ss_pred CEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCccceeec
Q psy226 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d~~i~vwd~~~~~~~~~l~ 373 (406)
.|.++.+ +..++++-+.|+++|+||+.+++++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4555554 36799999999999999999998766553
No 364
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=56.91 E-value=42 Score=32.37 Aligned_cols=57 Identities=25% Similarity=0.428 Sum_probs=40.4
Q ss_pred eeEEECCCCCEEEEEeCC------------CcEEEEeCCCCeEEEEEecC-CcceEEEEEecCCCEEEEE
Q psy226 152 QDIAFDQSGKLLVSCSAD------------MSLKLWDMSTYQCLKTMQGH-DHNVTGVAFLPNSDFVLSA 208 (406)
Q Consensus 152 ~~l~~~~~g~~l~sgs~d------------~~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~ 208 (406)
-.|+|++.|.+++.-..+ ..+.+.+..+++..+.+.++ ..+++.++|+||++.|++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 458999999977654322 23455566677777666665 3679999999999877664
No 365
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=53.89 E-value=1e+02 Score=26.21 Aligned_cols=152 Identities=8% Similarity=0.029 Sum_probs=88.1
Q ss_pred CCCeEEEEEcC--CCCEEEEEeCCCcEEEEEcCCCc------EEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC
Q psy226 106 RSPVIKVIFHP--VFSLMASCSEDATIRLWDYETGE------YERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177 (406)
Q Consensus 106 ~~~V~~v~~~p--~~~~latgs~dg~v~vwd~~~~~------~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~ 177 (406)
...|..+.. + +...++..+.+|.++-.....-. ....++ -.+.+..+........++..+..|.+..++.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk-egD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT-EGDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC-TTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC-CCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 445666544 4 46789999999999998765421 111122 2345666665555667888889998888875
Q ss_pred CC---------CeEEEEEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCCC-------eEEEEeecCCccEEEEEEC
Q psy226 178 ST---------YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG-------YCVKTLTGHREWVRQIKVS 241 (406)
Q Consensus 178 ~~---------~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~l~~~ 241 (406)
.. |...-.+. ..+.|.++...+++..++..+..|.++...+... .-+..+ ...+.+..+...
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~ 222 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPI 222 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEE
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEe
Confidence 32 11111222 2355666666666778889999999998876432 122222 222334333322
Q ss_pred CCCCEEEEEeCCCeEEE--EeC
Q psy226 242 PDGTLLASCSNDHTARV--WSL 261 (406)
Q Consensus 242 ~~~~~l~s~~~d~~v~v--wd~ 261 (406)
.+...++..+.+|.+.. ++.
T Consensus 223 ~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 223 KEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp SSEEEEEEEETTSCEEEEEEEG
T ss_pred CCCCEEEEEcCCCeEEEeeeCH
Confidence 23334555566666665 654
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=52.76 E-value=60 Score=31.18 Aligned_cols=61 Identities=21% Similarity=0.121 Sum_probs=44.1
Q ss_pred CCeEEEEEcCCCCEEEEEeC------------CCcEEEEEcCCCcEEEEeccc-ccCeeeEEECCCCCEEEEEe
Q psy226 107 SPVIKVIFHPVFSLMASCSE------------DATIRLWDYETGEYERALHGH-LDSVQDIAFDQSGKLLVSCS 167 (406)
Q Consensus 107 ~~V~~v~~~p~~~~latgs~------------dg~v~vwd~~~~~~~~~~~~h-~~~V~~l~~~~~g~~l~sgs 167 (406)
.....|.|.++|.+.++... ...|..++..++++...+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34567999999998884322 125667777788877766543 35689999999999887764
No 367
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=52.30 E-value=30 Score=27.36 Aligned_cols=19 Identities=26% Similarity=0.385 Sum_probs=17.4
Q ss_pred CChhhHHHHHHHHHHHHHh
Q psy226 3 LSQRQREELNKAVADYLLS 21 (406)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~ 21 (406)
||+.|+++++.+.-+|..+
T Consensus 68 LT~EQq~ql~~I~~e~r~~ 86 (175)
T 3lay_A 68 LTTEQQATAQKIYDDYYTQ 86 (175)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 8999999999999998765
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.25 E-value=27 Score=34.48 Aligned_cols=36 Identities=17% Similarity=0.485 Sum_probs=29.2
Q ss_pred eeeEEECCCCCEEEEEeCCCcEEEEeCCCCeEEEEEec
Q psy226 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG 188 (406)
Q Consensus 151 V~~l~~~~~g~~l~sgs~d~~i~vwd~~~~~~~~~~~~ 188 (406)
|.++.+ +..++++-+.|.++|+||+.+++++.+..-
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555555 367999999999999999999998877654
No 369
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=49.98 E-value=21 Score=24.15 Aligned_cols=35 Identities=14% Similarity=0.131 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCh
Q psy226 5 QRQREELNKAVADYLLSNGYLSALEGFKKDADLPA 39 (406)
Q Consensus 5 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 39 (406)
.+..--++.+|.+||+=.++..++..|..|+.++.
T Consensus 15 s~~GrLi~~LVrEyLef~~l~~TlsVf~pEs~l~~ 49 (82)
T 2d68_A 15 TKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQ 49 (82)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCC-
T ss_pred CcccHHHHHHHHHHHHHcCCcchHHhhhhccCCCC
Confidence 34556688999999999999999999999999874
No 370
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=49.81 E-value=1.3e+02 Score=26.30 Aligned_cols=112 Identities=11% Similarity=0.099 Sum_probs=69.8
Q ss_pred CCeEEEEEcC---CCCEEEEEeCCCcEEEEEcCCC-------cEEEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEe
Q psy226 107 SPVIKVIFHP---VFSLMASCSEDATIRLWDYETG-------EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176 (406)
Q Consensus 107 ~~V~~v~~~p---~~~~latgs~dg~v~vwd~~~~-------~~~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd 176 (406)
..|.++..-+ +...++..+.+|.++--.+..- .....++. .+.+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 4455544333 4789999999999998875431 11112222 34555555545556777788889888777
Q ss_pred CC--CCeE-------EE--EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcC
Q psy226 177 MS--TYQC-------LK--TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220 (406)
Q Consensus 177 ~~--~~~~-------~~--~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~ 220 (406)
.. .-.. .. .+. ....|.++...+.+.+++..+..|.++.-.+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CcccccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 65 2111 11 121 23457777666666789999999999888764
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=49.57 E-value=88 Score=30.02 Aligned_cols=60 Identities=23% Similarity=0.385 Sum_probs=41.7
Q ss_pred CeeeEEECCCCCEEEEEeC------------CCcEEEEeCCCCeEEEEEecC-CcceEEEEEecCCCEEEEEe
Q psy226 150 SVQDIAFDQSGKLLVSCSA------------DMSLKLWDMSTYQCLKTMQGH-DHNVTGVAFLPNSDFVLSAS 209 (406)
Q Consensus 150 ~V~~l~~~~~g~~l~sgs~------------d~~i~vwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s 209 (406)
....|.|.++|.+.++... ...+..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4567999999987774321 114666677677766655543 35789999999999887653
No 372
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=35.16 E-value=2.2e+02 Score=24.60 Aligned_cols=146 Identities=10% Similarity=0.100 Sum_probs=80.4
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCcE-------EEEec-ccccCeeeEEECCCCCEEEEEeCCCcEEEEeCC---CCeEE-
Q psy226 116 PVFSLMASCSEDATIRLWDYETGEY-------ERALH-GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS---TYQCL- 183 (406)
Q Consensus 116 p~~~~latgs~dg~v~vwd~~~~~~-------~~~~~-~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~~---~~~~~- 183 (406)
|+..++++.+.+|.|+--....-+. ...+. .-.+.+..+........++..+..|.++-.... .....
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 4667788889999998775432211 11111 112344444444445567777788876666542 11000
Q ss_pred --------EEEecCCcceEEEEEec---CCCEEEEEeCCCcEEEEEcCC-------CeEEEEeecCCccEEEEEECCCCC
Q psy226 184 --------KTMQGHDHNVTGVAFLP---NSDFVLSASRDKTIKMWEVAT-------GYCVKTLTGHREWVRQIKVSPDGT 245 (406)
Q Consensus 184 --------~~~~~h~~~v~~~~~~p---~~~~l~s~s~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~~~~~ 245 (406)
-.+. ....|.++...+ +..+++..+..|.++...+.. |.....+.. .+.+..+....++.
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 0011 123455554333 456788889999999887743 222222333 34455444444556
Q ss_pred EEEEEeCCCeEEEEeCCC
Q psy226 246 LLASCSNDHTARVWSLAT 263 (406)
Q Consensus 246 ~l~s~~~d~~v~vwd~~~ 263 (406)
.++..+.+|.+..+....
T Consensus 164 ~i~l~T~~G~~~r~~~~e 181 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRD 181 (312)
T ss_dssp EEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHH
Confidence 788888999998887643
No 373
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=34.71 E-value=2.3e+02 Score=24.72 Aligned_cols=236 Identities=10% Similarity=0.059 Sum_probs=113.8
Q ss_pred CCEEEEEeCCCcEEEEEcCC-------CcEEEEec-ccccCeeeEEECCCCCEEEEEeCCCcEEEE---eCCC------C
Q psy226 118 FSLMASCSEDATIRLWDYET-------GEYERALH-GHLDSVQDIAFDQSGKLLVSCSADMSLKLW---DMST------Y 180 (406)
Q Consensus 118 ~~~latgs~dg~v~vwd~~~-------~~~~~~~~-~h~~~V~~l~~~~~g~~l~sgs~d~~i~vw---d~~~------~ 180 (406)
.+.+++-+.+|.|+=-.+.+ ++-...+. ...+.+..+........|+.-++.|.+.-. ++.. |
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 34667778888887544221 00001111 123445544444444555555666655444 3332 2
Q ss_pred eEEEEEe--cCCcceEEEEEec---CCCEEEEEeCCCcEEEEEcCCC-------eEEEEeecCCccEEEEEECCCCCEEE
Q psy226 181 QCLKTMQ--GHDHNVTGVAFLP---NSDFVLSASRDKTIKMWEVATG-------YCVKTLTGHREWVRQIKVSPDGTLLA 248 (406)
Q Consensus 181 ~~~~~~~--~h~~~v~~~~~~p---~~~~l~s~s~d~~i~iwd~~~~-------~~~~~~~~~~~~v~~l~~~~~~~~l~ 248 (406)
..+..+. .....|.++...+ +..+++..+.+|.|+--.+... .....+.. .+.+..+........++
T Consensus 83 ~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 83 QHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEE
T ss_pred EEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEE
Confidence 2211110 1234455554443 4679999999999998876542 22222333 34444444444556788
Q ss_pred EEeCCCeEEEEeCC--CccceeEEecCCceEEEEEeCCCCCccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC---
Q psy226 249 SCSNDHTARVWSLA--TKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS--- 323 (406)
Q Consensus 249 s~~~d~~v~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~--- 323 (406)
..+..|.+..+... .-.. +......+..+...++.. +...... ..+.+++..+..|.++.-.+..
T Consensus 162 l~T~~G~~~rf~~~~~eip~---~gr~a~Gv~~i~L~~~d~---Vv~~~~~----~~~~~ll~~T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRP---MGRATSGVQGMRFNIDDR---LLSLNVV----REGTYLLVATSGGYAKRTAIEEYPV 231 (327)
T ss_dssp EEETTSEEEEEECCTTTSCC---CCTTSBCEESSCCCTTCC---EEEEEEC----CTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred EEECCCeEEEEECcccccCc---CCcCCCCeeeecCCCCCE---EEEEEEE----CCCCEEEEEeCCCcEEEEEHHHccc
Confidence 88888988888765 2111 000001111111111100 0000000 0234788889999988876421
Q ss_pred ----CeEEE--EEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Q psy226 324 ----GSLLF--TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364 (406)
Q Consensus 324 ----~~~~~--~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~vwd~~ 364 (406)
++-+. .+..-.+.+..+....+...++..+.+|.+.-++..
T Consensus 232 ~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 232 QGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp CCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 12222 222212334444433344566666777777777654
No 374
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=34.44 E-value=3.5e+02 Score=26.68 Aligned_cols=216 Identities=8% Similarity=0.088 Sum_probs=103.9
Q ss_pred eeEE-ECCCCCEEEEEe----CC-CcEEEEeCCCCeEEEE-EecCCc--------ceEEEEEecCCCEEEEE--------
Q psy226 152 QDIA-FDQSGKLLVSCS----AD-MSLKLWDMSTYQCLKT-MQGHDH--------NVTGVAFLPNSDFVLSA-------- 208 (406)
Q Consensus 152 ~~l~-~~~~g~~l~sgs----~d-~~i~vwd~~~~~~~~~-~~~h~~--------~v~~~~~~p~~~~l~s~-------- 208 (406)
..+. ++|++++++.+- +| ..++++|+.+++.+.. +. ... ....++|..++.++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcC
Confidence 3444 889998776542 22 4799999999876521 11 000 11345787444443331
Q ss_pred --eCCCcEEEEEcCCCe--EEEEeecCCcc-EEEEEECCCCC-----EEEEEeCC---CeEEEEeCCCccc-eeEEecCC
Q psy226 209 --SRDKTIKMWEVATGY--CVKTLTGHREW-VRQIKVSPDGT-----LLASCSND---HTARVWSLATKET-KAELRGHD 274 (406)
Q Consensus 209 --s~d~~i~iwd~~~~~--~~~~~~~~~~~-v~~l~~~~~~~-----~l~s~~~d---~~v~vwd~~~~~~-~~~~~~~~ 274 (406)
+....|+.|.+.+.. -...+.+.... -.....++++. .+++.+.+ ..+.+.+...... ...+....
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 123568888876642 22333333222 23345566665 34544423 3344555432111 11111111
Q ss_pred ceEEEEEeCCCCCccccccccCCCCCCCCCCEEEE----------EeCCCcEEEEECCCCe-------EEEE-E-eCCCc
Q psy226 275 HTVECVAWAPGVASESISEAAGRPPGQGGGPYLAT----------GSRDKTIKLWDVGSGS-------LLFT-L-IGHDN 335 (406)
Q Consensus 275 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s----------~~~d~~i~lwd~~~~~-------~~~~-~-~~h~~ 335 (406)
... +...+ ++.+++. ....+.|...|+.++. .... + .....
T Consensus 291 ~~~--~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (711)
T 4hvt_A 291 DAT--LQGSF------------------KEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANE 350 (711)
T ss_dssp TCE--EEEEE------------------TTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTE
T ss_pred cce--EeeeE------------------CCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCC
Confidence 000 00111 1222221 1245678888876531 1122 2 22344
Q ss_pred CEEEEEEcCCCCEEEEEeCCCe--EEEEeCCCCc-ccee-eccc-cceEEEEEEeCCCC
Q psy226 336 WVRGVTFHPGGKYLVSCGDDKT--LRVWDTANKR-NMKT-LEAH-SHFVTSLDFHRAHP 389 (406)
Q Consensus 336 ~v~~l~~s~~g~~l~sgs~d~~--i~vwd~~~~~-~~~~-l~~h-~~~v~~l~~~~~~~ 389 (406)
.+..+.+..+ ..+++...++. |.++|..++. .... +..- .+.+......+++.
T Consensus 351 ~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~ 408 (711)
T 4hvt_A 351 VFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEE 408 (711)
T ss_dssp EEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCS
T ss_pred eEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCC
Confidence 6778888875 56677777764 6677765553 2333 2211 23466666666664
No 375
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=31.05 E-value=2.8e+02 Score=24.53 Aligned_cols=50 Identities=14% Similarity=0.055 Sum_probs=27.0
Q ss_pred CEEEEEEcCC-CCEEEEEeCCCeEEEEeCCCCccceeecc--cc---ceEEEEEEeCC
Q psy226 336 WVRGVTFHPG-GKYLVSCGDDKTLRVWDTANKRNMKTLEA--HS---HFVTSLDFHRA 387 (406)
Q Consensus 336 ~v~~l~~s~~-g~~l~sgs~d~~i~vwd~~~~~~~~~l~~--h~---~~v~~l~~~~~ 387 (406)
.+.++.++|. ...|..+...+ |...+ ..++....+.. .. ..+.+++++|.
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~ 288 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQR 288 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSS
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCCCCCCCCccceEEEEECCC
Confidence 4889999986 35666666554 44443 22322222211 11 34678888763
No 376
>3eyi_A Z-DNA-binding protein 1; alternative splicing, DNA-binding, polymorphism, DNA binding protein/Z-DNA complex, DNA binding protein/DNA complex; 1.45A {Homo sapiens} PDB: 2l4m_A
Probab=29.37 E-value=31 Score=22.36 Aligned_cols=25 Identities=28% Similarity=0.308 Sum_probs=17.4
Q ss_pred CChhhHHHHHHHHHHHHHhcChHHHHHHH
Q psy226 3 LSQRQREELNKAVADYLLSNGYLSALEGF 31 (406)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 31 (406)
||+++ ...|++||..+|...++...
T Consensus 7 ls~~~----ee~I~~fL~~~Gp~~AL~IA 31 (72)
T 3eyi_A 7 FSQQR----EEDIYRFLKDNGPQRALVIA 31 (72)
T ss_dssp CSSHH----HHHHHHHHHHHCSEEHHHHH
T ss_pred hhhhh----HHHHHHHHHHcCCchHHHHH
Confidence 55554 44799999999876665533
No 377
>4gfq_A Ribosome-recycling factor; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Bacillus anthracis}
Probab=27.24 E-value=1.8e+02 Score=23.60 Aligned_cols=40 Identities=20% Similarity=0.290 Sum_probs=26.2
Q ss_pred CChhhHHHHHHHHHHHHHhcC---------hHHHHHHHHhhcCCChhhh
Q psy226 3 LSQRQREELNKAVADYLLSNG---------YLSALEGFKKDADLPAEVE 42 (406)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 42 (406)
||+.+|.||-+.+-++..+.. ....+..++++-.+.++..
T Consensus 129 LTeErRkelvK~ak~~~E~aKvaIRniRrda~~~lKk~~K~~~isEDe~ 177 (209)
T 4gfq_A 129 LTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDL 177 (209)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHH
Confidence 899999999999999886432 1122444444555655544
No 378
>2xz2_A CSTF-50, isoform B; RNA-binding protein, 3' END mRNA maturation, transcription; 1.40A {Drosophila melanogaster}
Probab=26.22 E-value=1.2e+02 Score=19.32 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=29.0
Q ss_pred hhhHHHHHHHHHHHHHhcChHHHHHHHHhhcCCC
Q psy226 5 QRQREELNKAVADYLLSNGYLSALEGFKKDADLP 38 (406)
Q Consensus 5 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 38 (406)
-|.|+.|-++|+-=|.=.||.+.+..+.......
T Consensus 13 iK~Re~LYrLIISQL~YDG~~~iA~~L~~~v~~~ 46 (66)
T 2xz2_A 13 VKNREILYRLMISQLMYDGLEKFAMELSMLVKAD 46 (66)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHHHHHHhhHHHHHHHHHhhcCCC
Confidence 4789999999999999999999988888766643
No 379
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=23.95 E-value=3.5e+02 Score=23.30 Aligned_cols=185 Identities=11% Similarity=0.095 Sum_probs=101.4
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEE-------E--EEecCCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC---C---
Q psy226 158 QSGKLLVSCSADMSLKLWDMSTYQCL-------K--TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT---G--- 222 (406)
Q Consensus 158 ~~g~~l~sgs~d~~i~vwd~~~~~~~-------~--~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~---~--- 222 (406)
++...+++.+.+|.|+--.+..++.. . .++. .+.+..+......+.++..+..|.++-..... .
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 45667888999999998876544221 1 1122 23444554445566777778888876665421 1
Q ss_pred ---eE---EEEeecCCccEEEE-EECC--CCCEEEEEeCCCeEEEEeCCCccce-------eEEecCCceEEEEEeCCCC
Q psy226 223 ---YC---VKTLTGHREWVRQI-KVSP--DGTLLASCSNDHTARVWSLATKETK-------AELRGHDHTVECVAWAPGV 286 (406)
Q Consensus 223 ---~~---~~~~~~~~~~v~~l-~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~-------~~~~~~~~~v~~~~~~~~~ 286 (406)
.. .-.+.. .+.|..+ .... +..+++..+..|.++...+..-... ..+.. ...+-.+....
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~-- 160 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF-- 160 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEEC--
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC--
Confidence 00 001111 2234333 3321 4567888899999998877432211 01111 11222211111
Q ss_pred CccccccccCCCCCCCCCCEEEEEeCCCcEEEEECCC---------CeEEEEEeCCCcCEEEEEEcCCCCEEEEEeCCCe
Q psy226 287 ASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGS---------GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357 (406)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~lwd~~~---------~~~~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~ 357 (406)
....++..+.+|.+..++... |.....+.. ...|.++..-+++..|++.+..|.
T Consensus 161 ----------------~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~ 223 (312)
T 1suu_A 161 ----------------KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGY 223 (312)
T ss_dssp ----------------TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSE
T ss_pred ----------------CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCc
Confidence 234577888888888776532 222333333 345666655555677888999999
Q ss_pred EEEEeCC
Q psy226 358 LRVWDTA 364 (406)
Q Consensus 358 i~vwd~~ 364 (406)
.+..++.
T Consensus 224 ~kr~~~~ 230 (312)
T 1suu_A 224 GKRLNMS 230 (312)
T ss_dssp EEEEEGG
T ss_pred eEEEEHH
Confidence 9988764
No 380
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=23.42 E-value=3.2e+02 Score=22.74 Aligned_cols=140 Identities=14% Similarity=0.026 Sum_probs=70.7
Q ss_pred EEEEEeCCCcEEEEEcCCCcE-EEEecccccCeeeEEECCCCCEEEEEeCCCcEEEEeC---CC----CeEEE---EEec
Q psy226 120 LMASCSEDATIRLWDYETGEY-ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM---ST----YQCLK---TMQG 188 (406)
Q Consensus 120 ~latgs~dg~v~vwd~~~~~~-~~~~~~h~~~V~~l~~~~~g~~l~sgs~d~~i~vwd~---~~----~~~~~---~~~~ 188 (406)
.+++.+.+|.|+--....-.. ...++ -.+.+..+........|+..+..|.+.-... .. +..+. .+.
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lk-e~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~- 81 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYK-AGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP- 81 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCC-TTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-
Confidence 455566666665433221100 00011 1233333333333344555567776555543 21 21110 111
Q ss_pred CCcceEEEEEecCCCEEEEEeCCCcEEEEEcCC-------CeEEEEeecCCccEEEEEEC-CCCCEEEEEeCCCeEEEEe
Q psy226 189 HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT-------GYCVKTLTGHREWVRQIKVS-PDGTLLASCSNDHTARVWS 260 (406)
Q Consensus 189 h~~~v~~~~~~p~~~~l~s~s~d~~i~iwd~~~-------~~~~~~~~~~~~~v~~l~~~-~~~~~l~s~~~d~~v~vwd 260 (406)
....|.++....++.+|+.++..|.++...+.. |.....+.. .+.+..+... .++..++..+.+|.+..+.
T Consensus 82 ~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~ 160 (256)
T 1zvt_A 82 PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAGRMLMFP 160 (256)
T ss_dssp TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTSEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCCeEEEEE
Confidence 234566664434566788899999999888743 222333332 2344444444 3455788888888888887
Q ss_pred CC
Q psy226 261 LA 262 (406)
Q Consensus 261 ~~ 262 (406)
..
T Consensus 161 ~~ 162 (256)
T 1zvt_A 161 VS 162 (256)
T ss_dssp GG
T ss_pred HH
Confidence 64
No 381
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=21.20 E-value=73 Score=18.24 Aligned_cols=17 Identities=47% Similarity=0.464 Sum_probs=14.1
Q ss_pred CChhhHHHHHHHHHHHH
Q psy226 3 LSQRQREELNKAVADYL 19 (406)
Q Consensus 3 ~~~~~~~~l~~~~~~~~ 19 (406)
||+.|.+|+|....+-.
T Consensus 3 LT~~EA~EfH~~~~~~~ 19 (41)
T 1nkz_B 3 LTAEQSEELHKYVIDGT 19 (41)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 89999999998876644
No 382
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.48 E-value=2.4e+02 Score=26.44 Aligned_cols=55 Identities=7% Similarity=-0.016 Sum_probs=0.0
Q ss_pred EEEEEeCCCcEEEEECCCCeE----------EEEEeCCCcCEEEEEEcCCCCEEEEEeCCCeEEE
Q psy226 306 YLATGSRDKTIKLWDVGSGSL----------LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRV 360 (406)
Q Consensus 306 ~l~s~~~d~~i~lwd~~~~~~----------~~~~~~h~~~v~~l~~s~~g~~l~sgs~d~~i~v 360 (406)
.+..|+.+|.|.-.-+..... ...+.....+|..+.++++..+|+.++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Done!