Your job contains 1 sequence.
>psy226
MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPAEVEKKYSGLLEKKWTSVIRLQ
KKVIELESKLSEAEKEYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSL
MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY
QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV
SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPG
QGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRV
WDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy226
(406 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015754 - symbol:Lis-1 "Lissencephaly-1" species:7... 1512 4.4e-155 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 1500 8.2e-154 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 1496 2.2e-153 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 1496 2.2e-153 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 1496 2.2e-153 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 1496 2.2e-153 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 1496 2.2e-153 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 1496 2.2e-153 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 1496 2.2e-153 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 1494 3.6e-153 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 1493 4.5e-153 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 1489 1.2e-152 1
ZFIN|ZDB-GENE-040116-2 - symbol:pafah1b1a "platelet-activ... 1461 1.1e-149 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 1460 1.4e-149 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 1276 4.5e-130 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 1226 8.9e-125 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 1107 3.6e-112 1
ASPGD|ASPL0000005121 - symbol:nudF species:162425 "Emeric... 793 6.8e-79 1
UNIPROTKB|Q00664 - symbol:nudF "Nuclear distribution prot... 793 6.8e-79 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 395 1.4e-55 2
UNIPROTKB|I3L3N5 - symbol:PAFAH1B1 "Platelet-activating f... 568 4.8e-55 1
UNIPROTKB|B4DF38 - symbol:PAFAH1B1 "Platelet-activating f... 554 1.5e-53 1
CGD|CAL0005179 - symbol:orf19.5410 species:5476 "Candida ... 344 8.6e-47 3
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 354 1.5e-45 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 362 3.1e-42 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 423 1.1e-39 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 420 2.3e-39 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 417 4.8e-39 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 417 4.8e-39 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 417 4.8e-39 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 417 4.8e-39 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 414 9.9e-39 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 244 1.7e-38 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 407 5.5e-38 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 401 2.4e-37 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 398 4.9e-37 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 296 6.1e-37 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 392 2.1e-36 1
MGI|MGI:1913972 - symbol:Spag16 "sperm associated antigen... 300 7.2e-36 3
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 253 2.7e-35 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 277 8.6e-35 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 284 2.3e-34 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 246 4.8e-34 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 282 7.8e-34 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 365 1.5e-33 1
UNIPROTKB|Q229Z6 - symbol:TTHERM_01308010 "POC1 centriola... 367 3.9e-33 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 303 5.9e-33 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 303 6.6e-33 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 289 8.0e-33 2
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 357 1.1e-32 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 256 1.3e-32 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 275 3.9e-32 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 303 7.9e-32 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 275 1.4e-31 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 348 1.5e-31 1
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 287 2.6e-31 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 275 3.0e-31 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 245 4.4e-31 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 341 5.4e-31 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 242 5.5e-31 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 340 6.9e-31 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 340 6.9e-31 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 340 6.9e-31 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 294 7.4e-31 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 246 7.5e-31 2
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 294 1.0e-30 3
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 254 1.1e-30 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 309 8.6e-30 2
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 334 1.4e-29 1
ASPGD|ASPL0000031743 - symbol:AN8505 species:162425 "Emer... 337 2.1e-29 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 318 2.6e-29 2
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 255 4.6e-29 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 252 1.2e-28 2
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 318 1.5e-28 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 318 1.5e-28 1
UNIPROTKB|J9JHP3 - symbol:APAF1 "Apoptotic protease-activ... 298 1.6e-28 2
FB|FBgn0010356 - symbol:Taf5 "TBP-associated factor 5" sp... 326 1.7e-28 1
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 317 1.9e-28 1
UNIPROTKB|E1BVN5 - symbol:PLRG1 "Uncharacterized protein"... 320 2.2e-28 1
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 322 2.4e-28 1
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 242 2.4e-28 2
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 316 2.4e-28 1
MGI|MGI:1858197 - symbol:Plrg1 "pleiotropic regulator 1, ... 319 2.8e-28 1
ZFIN|ZDB-GENE-040426-2787 - symbol:plrg1 "pleiotropic reg... 319 3.0e-28 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 257 3.3e-28 2
RGD|621047 - symbol:Plrg1 "pleiotropic regulator 1" speci... 318 3.6e-28 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 285 4.5e-28 2
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 283 5.0e-28 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 313 5.0e-28 1
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 283 5.0e-28 2
TAIR|locus:2050064 - symbol:AT2G21390 species:3702 "Arabi... 314 5.2e-28 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 315 5.4e-28 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 315 5.5e-28 1
ASPGD|ASPL0000005389 - symbol:sconB species:162425 "Emeri... 273 7.0e-28 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 283 7.1e-28 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 283 7.2e-28 2
UNIPROTKB|F1NNQ9 - symbol:PRPF4 "Uncharacterized protein"... 295 9.7e-28 2
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 310 1.0e-27 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 318 1.1e-27 1
DICTYBASE|DDB_G0275045 - symbol:gpbB "Guanine nucleotide-... 267 1.1e-27 2
WARNING: Descriptions of 1780 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 1512 (537.3 bits), Expect = 4.4e-155, P = 4.4e-155
Identities = 273/409 (66%), Positives = 327/409 (79%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPAEVEKKYSGLLEKKWTSVIRLQ 60
MVLSQRQREELN+A+ADYL SNGY +LE F+K+ADL EVEKK+ GLLEKKWTSVIRLQ
Sbjct: 3 MVLSQRQREELNQAIADYLGSNGYADSLETFRKEADLSTEVEKKFGGLLEKKWTSVIRLQ 62
Query: 61 KKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSL 120
KKV+ +EGAPT+ KR+P EWIPR PEKF+L+GHR+ + +VIFHP+F+L
Sbjct: 63 KKVMELEAKLTEAEKEVIEGAPTKNKRTPGEWIPRPPEKFSLTGHRASITRVIFHPIFAL 122
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS-T 179
M S SEDATIR+WD+ETGEYER+L GH DSVQD+AFD GKLL SCSAD+S+KLWD +
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
Y+C+KTM GHDHNV+ VAF+P D+VLSASRD+TIKMWEVATGYCVKT TGHREWVR ++
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
V +G++ A+CSND T RVW +K+ K ELR H+HTVEC+AWAP A+ +I+EAA
Sbjct: 243 VHIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADN 302
Query: 300 XXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
+LA+GSRDKTI++WDV G L TL GHDNWVRG+ FHPGGKYLVS DDKT
Sbjct: 303 KKGHHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKT 362
Query: 358 LRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+RVWD NKR MKTL AH HF TS+DFH+AHPYV++GSVD+TVKVWECR
Sbjct: 363 IRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 1500 (533.1 bits), Expect = 8.2e-154, P = 8.2e-154
Identities = 273/410 (66%), Positives = 322/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPA--EVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A+L E++KK++GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDVNDELDKKFAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEITLGGPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SLM S SEDATI++WDYE G++ER L GH DSVQDI+FDQ+GKLL SCSADM++KLWD
Sbjct: 121 SLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKT+KMWEVATGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTLLASCSND T RVW +ATKE KAELR H+H VEC++WAP A +ISEA
Sbjct: 241 RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WD+ +G L TL+GHDNWVRGV FHPGG+++VSC DDK
Sbjct: 301 NKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLR+WD NKR MKTL AH HFVTSLDFH+A PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 273/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 273/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 273/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPA--EVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A+L E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 273/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 273/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 273/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 1496 (531.7 bits), Expect = 2.2e-153, P = 2.2e-153
Identities = 273/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 1494 (531.0 bits), Expect = 3.6e-153, P = 3.6e-153
Identities = 272/410 (66%), Positives = 321/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY +A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEAAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSV+DI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 1493 (530.6 bits), Expect = 4.5e-153, P = 4.5e-153
Identities = 272/410 (66%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SA+RDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 1489 (529.2 bits), Expect = 1.2e-152, P = 1.2e-152
Identities = 270/410 (65%), Positives = 320/410 (78%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPA--EVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A+L E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDVNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S+M S SEDATI++WDYETG++ER L GH DSVQDI+FD +GKLL SCSADM++KLWD
Sbjct: 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + +ISEA
Sbjct: 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WD+ +G L TL+GHDNWVRGV FH GGK+++SC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLRVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 1461 (519.4 bits), Expect = 1.1e-149, P = 1.1e-149
Identities = 269/410 (65%), Positives = 316/410 (77%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIR 58
MVLSQRQR+ELN+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIR
Sbjct: 1 MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR 60
Query: 59 LQKKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
LQKKV+ G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVF
Sbjct: 61 LQKKVMELESKLNEAKEEINIGGPIGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF 120
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S++ S SEDATI++WD+ETG++ER L GH DSVQDI+FD +GKLL SCSADM++KLWD
Sbjct: 121 SVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQ 180
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEVATGYCVKT TGHREWVR +
Sbjct: 181 GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV 240
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+ + DGTL+AS SND T RVW +ATKE KAELR H+H VEC++WAP A +I EA
Sbjct: 241 RPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSE 300
Query: 299 XXXXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
+L +GSRDKTIK+WDV G L TL+GHDNWVRGV HPGGKY+VSC DDK
Sbjct: 301 TKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDK 360
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLR+WD NKR KTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 361 TLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 1460 (519.0 bits), Expect = 1.4e-149, P = 1.4e-149
Identities = 266/408 (65%), Positives = 315/408 (77%)
Query: 3 LSQRQREELNKAVADYLLSNGYLSALEGFKKDA--DLPAEVEKKYSGLLEKKWTSVIRLQ 60
LSQ+ ++N+A+ADYL SNGY A FKK+A D+ E++KKY+GLLEKKWTSVIRLQ
Sbjct: 3 LSQQFSVQINRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRLQ 62
Query: 61 KKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSL 120
KKV+ + G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVFS+
Sbjct: 63 KKVMELESKLNEAKEEFTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSV 122
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
M S SEDATI++WDYETG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD +
Sbjct: 123 MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 182
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR ++
Sbjct: 183 ECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 242
Query: 241 SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXX 300
+ DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP + SISEA
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETK 302
Query: 301 XXXXX--YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
+L +GSRDKTIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDKTL
Sbjct: 303 KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362
Query: 359 RVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
RVWD NKR MKTL AH HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 1276 (454.2 bits), Expect = 4.5e-130, P = 4.5e-130
Identities = 226/332 (68%), Positives = 264/332 (79%)
Query: 77 YVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE 136
+ G P KR P EWIPR PEK+ALSGHRSPV +VIFHPVFS+M S SEDATI++WDYE
Sbjct: 14 FTSGGPLGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 73
Query: 137 TGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV 196
TG++ER L GH DSVQDI+FD SGKLL SCSADM++KLWD ++C++TM GHDHNV+ V
Sbjct: 74 TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSV 133
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
A +PN D ++SASRDKTIKMWEV TGYCVKT TGHREWVR ++ + DGTL+ASCSND T
Sbjct: 134 AIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTV 193
Query: 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXX--YLATGSRDK 314
RVW +ATKE KAELR H+H VEC++WAP + SISEA +L +GSRDK
Sbjct: 194 RVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 253
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
TIK+WDV +G L TL+GHDNWVRGV FH GGK+++SC DDKTLRVWD NKR MKTL A
Sbjct: 254 TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 313
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
H HFVTSLDFH+ PYVVTGSVD+TVKVWECR
Sbjct: 314 HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 1226 (436.6 bits), Expect = 8.9e-125, P = 8.9e-125
Identities = 220/407 (54%), Positives = 288/407 (70%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPAEVEKKYSGLLEKKWTSVIRLQ 60
M LS+RQ+EE+N+A+A+Y+ +NGY + F K++ L K G+LEKKWT+V+RLQ
Sbjct: 1 MSLSERQKEEINRAIAEYMQNNGYSESFSVFLKESSLSENDIKPLGGILEKKWTTVLRLQ 60
Query: 61 KKVIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSL 120
+KV GAPTR KR +WIPR PE L+GHR P+ +VIFHP++++
Sbjct: 61 RKVNDLESKLQESQREINHGAPTRDKRQAADWIPRPPETQKLTGHRLPITRVIFHPLWTI 120
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS-T 179
MASCSEDATI++WDYETG+ ER L GH D+V DIA D +GK LVSCS+D+S+KLWD T
Sbjct: 121 MASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQT 180
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
Y CLK+++GH+H V+ V FLP DFVLSASRD TIK W+++TGYCV T GH +WVR I+
Sbjct: 181 YDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIR 240
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
+S DGTL AS S D T VWS ATK K LR H+H VECV WAP A +++
Sbjct: 241 ISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVT---GQQP 297
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
L +GSRD++IK W++ +G +LFTL+ H+NWVRG+ FHP GKYL+S DDKTLR
Sbjct: 298 EGNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLR 357
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
VW+ + +R MK +EAH HFV+++ FH+ P+V+TGSVD + KVWECR
Sbjct: 358 VWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 1107 (394.7 bits), Expect = 3.6e-112, P = 3.6e-112
Identities = 215/419 (51%), Positives = 281/419 (67%)
Query: 1 MVLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPAEVEKKYSGLLEKKWTSVIRLQ 60
MVL+ +Q+EELN ++ DY S+ Y S+ E FKK+ +V+KK GLLEKKWTSVIRLQ
Sbjct: 1 MVLTSKQKEELNGSILDYFESSQYKSSFEEFKKETGTELDVKKK--GLLEKKWTSVIRLQ 58
Query: 61 KKVIXXXXXXXXXXXXYVEGAPTRAKRS--PTEWIPRAPEKFALSGHRSPVIKVIFHPVF 118
KKV+ G R + +PR PEK L+GHR+ + V FHP F
Sbjct: 59 KKVLDLEAKVAQLEEELNSGGGRGGGRGRGKEDALPRPPEKHILTGHRNCINSVKFHPSF 118
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SLM S SEDATI++WD+E+GE+ER L GH ++VQDI FD++G LL SCSAD+++KLWD
Sbjct: 119 SLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQ 178
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
TY C+KT+ GHDHNV+ V F P+ D ++S+SRDKTIK+WE ATGYC+KTL GH +WVR+I
Sbjct: 179 TYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKI 238
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA-------PGVA---- 287
VS DG+ +ASCSND T + W++ E A R H H VEC+A++ PG
Sbjct: 239 TVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTP 298
Query: 288 -SESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG 346
+S + YLATGSRDKTIK+W++ +G L T IGHDNWVR V FHP G
Sbjct: 299 EGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCG 358
Query: 347 KYLVSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
K+L+S GDDKT+RVWD A R +KT+ EAH+HF++ LDF +P++ TG VD +KVW+
Sbjct: 359 KFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWK 417
Score = 155 (59.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 29/100 (29%), Positives = 58/100 (58%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+A+ S D TI++W+ TG GH + V+ + F GK L+S D ++++WD++
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQG 378
Query: 181 QCLKTM-QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
+C+KT+ + H H ++ + F ++ + + D IK+W++
Sbjct: 379 RCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 169/398 (42%), Positives = 240/398 (60%)
Query: 2 VLSQRQREELNKAVADYL-LSNGYLSA---LEGFKKDADLPAEVEKKYSGLLEKKWTSVI 57
+L+ Q E L+KA+ YL + N +A E D KK+ G+LEKKWT +
Sbjct: 4 ILTAPQAEALHKAMLAYLSVINAPQTAETLREELHFDESYNEATCKKFEGVLEKKWTGIA 63
Query: 58 RLQKKVIXXXXXXXXXXXXYVEGAPT--RAK-RSPTEWIPRAPEKFALSGHRSPVIKVIF 114
RLQ++ I +E +P+ RAK + PT W+P+ L+ HR V V F
Sbjct: 64 RLQRR-INDLEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAF 122
Query: 115 HPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD-QSGK-LLVSCSADMSL 172
HPVF+ +AS SED TI++WD+E GE ER L GH+ V + + Q G LL SCS+D+++
Sbjct: 123 HPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 173 KLWDMST-YQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTLTG 230
KLWD S Y ++T+ GHDH+V+ V FL ++D ++SASRD T+++W+V+TG+CVK +
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKS 242
Query: 231 HRE-WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE 289
E W+R + S DG L S D VW +++ E KA L GH++ +EC +AP + E
Sbjct: 243 ATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYE 302
Query: 290 SISEAAXXXX---XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG 346
++ A ++ATG+RDKTIKLW+ G L+ TL GHDNWVRG+ FHPGG
Sbjct: 303 HLATLAGLKKPPPATSSCEFVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGG 361
Query: 347 KYLVSCGDDKTLRVWDTANK-RNMKTLE-AHSHFVTSL 382
KYL S DDKT+R WD + + R +KT+ AH HFV+ +
Sbjct: 362 KYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCI 399
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 48/149 (32%), Positives = 76/149 (51%)
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
++Y+ L T+ G + + +FV + +RDKTIK+WE A G +KTL GH WVR
Sbjct: 299 ASYEHLATLAGLKKPPPATS---SCEFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRG 354
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAE-LRG-HDHTVECVAWAPGVASESISEAA 295
+ P G L S S+D T R W L+ + + + G H+H V C+ WAP +++ A
Sbjct: 355 LVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAPSPNTDNPDPAG 414
Query: 296 XXXXXXXXX--XY---LATGSRDKTIKLW 319
Y +ATG D +++++
Sbjct: 415 EKAGKKDAVKPSYRCVIATGCADNSVRVF 443
Score = 178 (67.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 48/161 (29%), Positives = 76/161 (47%)
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE----SISEAAXXXXXXXXXXYL 307
ND A V SL + + + W P +S S +A L
Sbjct: 70 NDLEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSL 129
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF--HPGGKYLVSCGDDKTLRVWDTAN 365
A+GS D TIK+WD G + TL GH V G+ + G L SC D T+++WD +
Sbjct: 130 ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSK 189
Query: 366 K-RNMKTLEAHSHFVTSLDFHRAHP-YVVTGSVDKTVKVWE 404
N++TL H H V+S+ F ++ ++++ S D T+++W+
Sbjct: 190 DYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Score = 171 (65.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 55/181 (30%), Positives = 84/181 (46%)
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGV 286
TLT HR+ V + P T LAS S D T ++W E + L+GH V + + G
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG-GQ 167
Query: 287 ASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG-SLLFTLIGHDNWVRGVTFHPG 345
++ LA+ S D TIKLWD + + TL GHD+ V V F
Sbjct: 168 KGNTL---------------LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTS 212
Query: 346 G-KYLVSCGDDKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+L+S D TLR+WD + +K ++ A ++ + ++V+G D+ + VW
Sbjct: 213 NDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVW 272
Query: 404 E 404
E
Sbjct: 273 E 273
Score = 62 (26.9 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 390 YVVTGSVDKTVKVWECR 406
+V TG+ DKT+K+WE R
Sbjct: 322 FVATGARDKTIKLWEAR 338
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
Identities = 169/398 (42%), Positives = 240/398 (60%)
Query: 2 VLSQRQREELNKAVADYL-LSNGYLSA---LEGFKKDADLPAEVEKKYSGLLEKKWTSVI 57
+L+ Q E L+KA+ YL + N +A E D KK+ G+LEKKWT +
Sbjct: 4 ILTAPQAEALHKAMLAYLSVINAPQTAETLREELHFDESYNEATCKKFEGVLEKKWTGIA 63
Query: 58 RLQKKVIXXXXXXXXXXXXYVEGAPT--RAK-RSPTEWIPRAPEKFALSGHRSPVIKVIF 114
RLQ++ I +E +P+ RAK + PT W+P+ L+ HR V V F
Sbjct: 64 RLQRR-INDLEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAF 122
Query: 115 HPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD-QSGK-LLVSCSADMSL 172
HPVF+ +AS SED TI++WD+E GE ER L GH+ V + + Q G LL SCS+D+++
Sbjct: 123 HPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTI 182
Query: 173 KLWDMST-YQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTLTG 230
KLWD S Y ++T+ GHDH+V+ V FL ++D ++SASRD T+++W+V+TG+CVK +
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKS 242
Query: 231 HRE-WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE 289
E W+R + S DG L S D VW +++ E KA L GH++ +EC +AP + E
Sbjct: 243 ATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYE 302
Query: 290 SISEAAXXXX---XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG 346
++ A ++ATG+RDKTIKLW+ G L+ TL GHDNWVRG+ FHPGG
Sbjct: 303 HLATLAGLKKPPPATSSCEFVATGARDKTIKLWEA-RGRLIKTLHGHDNWVRGLVFHPGG 361
Query: 347 KYLVSCGDDKTLRVWDTANK-RNMKTLE-AHSHFVTSL 382
KYL S DDKT+R WD + + R +KT+ AH HFV+ +
Sbjct: 362 KYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCI 399
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 48/149 (32%), Positives = 76/149 (51%)
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
++Y+ L T+ G + + +FV + +RDKTIK+WE A G +KTL GH WVR
Sbjct: 299 ASYEHLATLAGLKKPPPATS---SCEFVATGARDKTIKLWE-ARGRLIKTLHGHDNWVRG 354
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAE-LRG-HDHTVECVAWAPGVASESISEAA 295
+ P G L S S+D T R W L+ + + + G H+H V C+ WAP +++ A
Sbjct: 355 LVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISGAHEHFVSCIRWAPSPNTDNPDPAG 414
Query: 296 XXXXXXXXX--XY---LATGSRDKTIKLW 319
Y +ATG D +++++
Sbjct: 415 EKAGKKDAVKPSYRCVIATGCADNSVRVF 443
Score = 178 (67.7 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 48/161 (29%), Positives = 76/161 (47%)
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE----SISEAAXXXXXXXXXXYL 307
ND A V SL + + + W P +S S +A L
Sbjct: 70 NDLEAEVRSLQAELEASPSAARAKNQDPTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSL 129
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF--HPGGKYLVSCGDDKTLRVWDTAN 365
A+GS D TIK+WD G + TL GH V G+ + G L SC D T+++WD +
Sbjct: 130 ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSK 189
Query: 366 K-RNMKTLEAHSHFVTSLDFHRAHP-YVVTGSVDKTVKVWE 404
N++TL H H V+S+ F ++ ++++ S D T+++W+
Sbjct: 190 DYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Score = 171 (65.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 55/181 (30%), Positives = 84/181 (46%)
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGV 286
TLT HR+ V + P T LAS S D T ++W E + L+GH V + + G
Sbjct: 109 TLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG-GQ 167
Query: 287 ASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG-SLLFTLIGHDNWVRGVTFHPG 345
++ LA+ S D TIKLWD + + TL GHD+ V V F
Sbjct: 168 KGNTL---------------LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTS 212
Query: 346 G-KYLVSCGDDKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+L+S D TLR+WD + +K ++ A ++ + ++V+G D+ + VW
Sbjct: 213 NDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVW 272
Query: 404 E 404
E
Sbjct: 273 E 273
Score = 62 (26.9 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 390 YVVTGSVDKTVKVWECR 406
+V TG+ DKT+K+WE R
Sbjct: 322 FVATGARDKTIKLWEAR 338
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 395 (144.1 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 81/187 (43%), Positives = 113/187 (60%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E+ L H PV V+F P + S S D T+++WD TGE + L GH +V+ +AF
Sbjct: 742 EQQTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFS 801
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
GKLL S S D ++ LWD +T + L+T +GH H++ VAF P+ + SAS D TIK+W
Sbjct: 802 PDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIW 861
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
++ATG +TL H + VR + SPDG LLAS S D T +VW+ AT E + L G V
Sbjct: 862 DLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWV 921
Query: 278 ECVAWAP 284
+ VA++P
Sbjct: 922 KSVAFSP 928
Score = 372 (136.0 bits), Expect = 3.4e-50, Sum P(2) = 3.4e-50
Identities = 81/228 (35%), Positives = 125/228 (54%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H V V F P L+AS S D+TI++W+ TGE +++L G V+ +AF GK
Sbjct: 872 LDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK 931
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S S ++KLW+ +T + L+T++GH +V VAF P+ + S+S D TIK+W T
Sbjct: 932 KLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTT 991
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G +T GH W+R + SPDG L S S+D+T ++W LAT E + L H +V VA
Sbjct: 992 GELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVA 1051
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT 329
++P + ++ ++ ATG +T++ G S+ F+
Sbjct: 1052 FSPD--DKQLASSSLDSTIKLWDS--ATGELQRTLEGHSQGVRSVTFS 1095
Score = 371 (135.7 bits), Expect = 5.0e-53, Sum P(2) = 5.0e-53
Identities = 78/194 (40%), Positives = 107/194 (55%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P E L GH V + F P L+AS S D TI LWD TGE + GH S
Sbjct: 777 WDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHS 836
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ +AF GK L S S D ++K+WD++T + +T+ H +V VAF P+ + S+S
Sbjct: 837 IWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSL 896
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D TIK+W ATG ++L G WV+ + SPDG LAS S +T ++W+ AT E L
Sbjct: 897 DSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTL 956
Query: 271 RGHDHTVECVAWAP 284
GH +V VA++P
Sbjct: 957 EGHSQSVRSVAFSP 970
Score = 369 (135.0 bits), Expect = 7.1e-50, Sum P(2) = 7.1e-50
Identities = 79/194 (40%), Positives = 112/194 (57%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P E L GH V V F P +AS S D TI+LW+ TGE ++ GH
Sbjct: 945 WNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLW 1004
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
++ +AF GK LVS S D ++KLWD++T + ++++ H +V VAF P+ + S+S
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D TIK+W+ ATG +TL GH + VR + SPDG LLAS S D T ++W+ T E + L
Sbjct: 1065 DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTL 1124
Query: 271 RGHDHTVECVAWAP 284
G V+ VA++P
Sbjct: 1125 TGRSDWVDSVAFSP 1138
Score = 365 (133.5 bits), Expect = 1.7e-50, Sum P(2) = 1.7e-50
Identities = 71/181 (39%), Positives = 108/181 (59%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + V F P +AS S+D+TI++WD TGE ++ L H SV+ +AF GKLL
Sbjct: 832 GHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLL 891
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++K+W+ +T + ++++G V VAF P+ + S S T+K+W ATG
Sbjct: 892 ASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGE 951
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
++TL GH + VR + SPDG LAS S+D T ++W+ T E + +GHD + VA++
Sbjct: 952 LLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFS 1011
Query: 284 P 284
P
Sbjct: 1012 P 1012
Score = 364 (133.2 bits), Expect = 5.2e-32, P = 5.2e-32
Identities = 82/196 (41%), Positives = 110/196 (56%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L H V V F P +AS S D+TI+LWD TGE +R L GH V+ + F G
Sbjct: 1039 SLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDG 1098
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
KLL S S D ++KLW+ T + +T+ G V VAF P+ + S D TIK+W+ A
Sbjct: 1099 KLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSA 1158
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
TG ++TL GH + ++ + SPDG LLAS S D TA++W AT E GH VE V
Sbjct: 1159 TGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESV 1218
Query: 281 AWAPG---VASESISE 293
A++P +AS S E
Sbjct: 1219 AFSPDGKLLASSSYGE 1234
Score = 354 (129.7 bits), Expect = 6.0e-31, P = 6.0e-31
Identities = 73/183 (39%), Positives = 101/183 (55%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V V F P L+AS S D TI+LW+ TGE ++ L G D V +AF GK
Sbjct: 1082 LEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGK 1141
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S D ++KLWD +T + L+T++GH + V F P+ + S S D+T K+W+ AT
Sbjct: 1142 QLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPAT 1201
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G ++ GH +WV + SPDG LLAS S T ++W T E L D + VA
Sbjct: 1202 GELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVA 1261
Query: 282 WAP 284
++P
Sbjct: 1262 FSP 1264
Score = 344 (126.2 bits), Expect = 3.3e-47, Sum P(2) = 3.3e-47
Identities = 75/194 (38%), Positives = 107/194 (55%)
Query: 92 WIPRAPE-KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P E + +L G V V F P +AS SE T++LW+ TGE + L GH S
Sbjct: 903 WNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQS 962
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ +AF GK L S S+D ++KLW+ +T + +T +GHD + VAF P+ ++S S
Sbjct: 963 VRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSD 1022
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D TIK+W++AT ++L H V + SPD LAS S D T ++W AT E + L
Sbjct: 1023 DNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTL 1082
Query: 271 RGHDHTVECVAWAP 284
GH V V ++P
Sbjct: 1083 EGHSQGVRSVTFSP 1096
Score = 344 (126.2 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 75/195 (38%), Positives = 104/195 (53%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + V F P + S S+D TI+LWD T E +++L H SV +AF K L
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQL 1059
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++KLWD +T + +T++GH V V F P+ + S S D TIK+W TG
Sbjct: 1060 ASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGE 1119
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+TLTG +WV + SPDG LAS D T ++W AT E L GH ++ V ++
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 284 PG---VASESISEAA 295
P +AS S + A
Sbjct: 1180 PDGKLLASGSYDQTA 1194
Score = 312 (114.9 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 73/187 (39%), Positives = 98/187 (52%)
Query: 92 WIPRAPE-KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P E + L+G V V F P +AS D+TI+LWD TGE + L GH D
Sbjct: 1113 WNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDR 1172
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+Q + F GKLL S S D + KLWD +T + L+ +GH V VAF P+ + S+S
Sbjct: 1173 IQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSY 1232
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
+TIK+W+ TG ++TL E + SPDG LAS T ++W AT E L
Sbjct: 1233 GETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWDPATGELLQAL 1291
Query: 271 RGHDHTV 277
+GH V
Sbjct: 1292 KGHSKWV 1298
Score = 222 (83.2 bits), Expect = 1.4e-55, Sum P(2) = 1.4e-55
Identities = 42/98 (42%), Positives = 60/98 (61%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S D TIKLW+ +G L T GHD W+R V F P GK+LVS DD T+++WD A
Sbjct: 975 LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS 1034
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++LE HS V ++ F + + S+D T+K+W+
Sbjct: 1035 ELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWD 1072
Score = 212 (79.7 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 42/97 (43%), Positives = 57/97 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS D TI LWD +G LL T GH + + V F P GK L S DD T+++WD A
Sbjct: 807 LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATG 866
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+TL++HS V S+ F + + S+D T+KVW
Sbjct: 867 ELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Score = 207 (77.9 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 52/168 (30%), Positives = 80/168 (47%)
Query: 241 SPDGTLLASCSNDHTARVWSLATKETKAELRG--HDHTVECVAWAPGVASESI---SEAA 295
S G LL + H +WS+A EL D T++ A G +++ S++
Sbjct: 821 SATGELLQTFEG-HPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSV 879
Query: 296 XXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDD 355
LA+ S D TIK+W+ +G L +L G WV+ V F P GK L S +
Sbjct: 880 RSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEK 939
Query: 356 KTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
T+++W+ A ++TLE HS V S+ F + + S D T+K+W
Sbjct: 940 NTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Score = 204 (76.9 bits), Expect = 1.1e-53, Sum P(2) = 1.1e-53
Identities = 51/157 (32%), Positives = 77/157 (49%)
Query: 253 DHTARVWSLATKETKAELRGH--DHTVECVAWAPGVASESI---SEAAXXXXXXXXXXYL 307
DH+ V ++A +L D T++ A G ++ S+ L
Sbjct: 1042 DHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLL 1101
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
A+ S D TIKLW+ +G L TL G +WV V F P GK L S D T+++WD+A
Sbjct: 1102 ASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGE 1161
Query: 368 NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++TLE HS + S+ F + +GS D+T K+W+
Sbjct: 1162 LLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWD 1198
Score = 199 (75.1 bits), Expect = 3.6e-53, Sum P(2) = 3.6e-53
Identities = 37/98 (37%), Positives = 58/98 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS T+KLW+ +G LL TL GH VR V F P GK L S D T+++W++
Sbjct: 933 LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTG 992
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+T + H ++ ++ F ++V+GS D T+K+W+
Sbjct: 993 ELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Score = 198 (74.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 38/98 (38%), Positives = 55/98 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS D T+K+WD +G LL TL GH V + F P GK L S D T+ +WD+A
Sbjct: 765 LVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATG 824
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++T E H H + S+ F + + S D T+K+W+
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWD 862
Score = 194 (73.4 bits), Expect = 1.2e-52, Sum P(2) = 1.2e-52
Identities = 39/98 (39%), Positives = 57/98 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+G D TIKLWD +G LL TL GH + ++ V F P GK L S D+T ++WD A
Sbjct: 1143 LASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATG 1202
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ E HS +V S+ F + + S +T+K+W+
Sbjct: 1203 ELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Score = 184 (69.8 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 38/98 (38%), Positives = 53/98 (54%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+L +GS D TIKLWD+ + L +L H V V F P K L S D T+++WD+A
Sbjct: 1016 HLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSAT 1075
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+TLE HS V S+ F + + S D T+K+W
Sbjct: 1076 GELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLW 1113
Score = 156 (60.0 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS D+T KLWD +G LL GH WV V F P GK L S +T+++WD
Sbjct: 1185 LASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWDPVTG 1244
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++TL S+ F + + + T K+W+
Sbjct: 1245 ELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIWD 1281
Score = 138 (53.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
TL H V V F P GK LVS D T+++WD A ++TL+ HS V SL F
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDG 804
Query: 389 PYVVTGSVDKTVKVWE 404
+ +GS D T+ +W+
Sbjct: 805 KLLASGSYDNTIDLWD 820
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 55/187 (29%), Positives = 80/187 (42%)
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
SD+V S + K ++A+GY T+ + W S G LL + H+ R+ S+
Sbjct: 1128 SDWVDSVAFSPDGK--QLASGYYDSTI---KLWD-----SATGELLQTLEG-HSDRIQSV 1176
Query: 262 A-TKETKAELRG-HDHTVECVAWAPGVAS-----ESISEAAXXXXXXXXXXYLATGSRDK 314
+ + K G +D T + W P E S+ LA+ S +
Sbjct: 1177 VFSPDGKLLASGSYDQTAKL--WDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGE 1234
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
TIKLWD +G LL TL D V F P G L S D ++WD A ++ L+
Sbjct: 1235 TIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASV-DIFDTKIWDPATGELLQALKG 1293
Query: 375 HSHFVTS 381
HS +V S
Sbjct: 1294 HSKWVWS 1300
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 103/206 (50%), Positives = 141/206 (68%)
Query: 167 SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK 226
SADM++KLWD ++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVK
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGV 286
T TGHREWVR ++ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPES 120
Query: 287 ASESISEAAXXXXXX----------XXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336
+ SISEA ++ + + DKT+++WD + + TL H+++
Sbjct: 121 SYSSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 180
Query: 337 VRGVTFHPGGKYLVSCGDDKTLRVWD 362
V + FH Y+V+ D+T++VW+
Sbjct: 181 VTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 60/76 (78%), Positives = 66/76 (86%)
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
+GHDNWVRGV FH GGK+++SC DDKTLRVWD NKR MKTL AH HFVTSLDFH+ PY
Sbjct: 133 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 192
Query: 391 VVTGSVDKTVKVWECR 406
VVTGSVD+TVKVWECR
Sbjct: 193 VVTGSVDQTVKVWECR 208
Score = 239 (89.2 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 59/195 (30%), Positives = 95/195 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
+ GH V V P + S S D TI++W+ +TG + GH + V+ + +Q G
Sbjct: 20 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 79
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L+ SCS D ++++W ++T +C ++ H+H V +++ P S + S S AT
Sbjct: 80 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS-SISE---------AT 129
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G V GH WVR + G + SC++D T RVW K L H+H V +
Sbjct: 130 GSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 185
Query: 282 W---APGVASESISE 293
+ AP V + S+ +
Sbjct: 186 FHKTAPYVVTGSVDQ 200
Score = 217 (81.4 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 63/209 (30%), Positives = 98/209 (46%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184
S D TI+LWD++ E R +HGH +V +A +G +VS S D ++K+W++ T C+K
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 185 TMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
T GH V V PN D + S S D+T+++W VAT C L H V I +P
Sbjct: 61 TFTGHREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 118
Query: 243 DGTLLASCSNDHTARV----WS---LATKETKAELR-GHDHTVECVAWAPGVASESIS-- 292
+ + +S S + V W L K L D T+ + ++++
Sbjct: 119 ESSY-SSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 177
Query: 293 -EAAXXXXXXXXXXYLATGSRDKTIKLWD 320
Y+ TGS D+T+K+W+
Sbjct: 178 EHFVTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++ + SRDKTIK+W+V +G + T GH WVR V + G + SC +D+T+RVW A
Sbjct: 38 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 97
Query: 366 KRNMKTLEAHSHFVTSLDF 384
K L H H V + +
Sbjct: 98 KECKAELREHEHVVECISW 116
Score = 155 (59.6 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 32/93 (34%), Positives = 50/93 (53%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S D TIKLWD + T+ GHD+ V V P G ++VS DKT+++W+ +K
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
T H +V + ++ + + S D+TV+VW
Sbjct: 61 TFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 93
Score = 125 (49.1 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + V V+FH + SC++D T+R+WDY+ + L+ H V + F ++ +
Sbjct: 134 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 193
Query: 164 VSCSADMSLKLWD 176
V+ S D ++K+W+
Sbjct: 194 VTGSVDQTVKVWE 206
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 100/203 (49%), Positives = 138/203 (67%)
Query: 170 MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT 229
M++KLWD ++C++TM GHDHNV+ VA +PN D ++SASRDKTIKMWEV TGYCVKT T
Sbjct: 1 MTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT 60
Query: 230 GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE 289
GHREWVR ++ + DGTL+ASCSND T RVW +ATKE KAELR H+H VEC++WAP +
Sbjct: 61 GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS 120
Query: 290 SISEAAXXXXXX----------XXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339
SISEA ++ + + DKT+++WD + + TL H+++V
Sbjct: 121 SISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 180
Query: 340 VTFHPGGKYLVSCGDDKTLRVWD 362
+ FH Y+V+ D+T++VW+
Sbjct: 181 LDFHKTAPYVVTGSVDQTVKVWE 203
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 60/76 (78%), Positives = 66/76 (86%)
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
+GHDNWVRGV FH GGK+++SC DDKTLRVWD NKR MKTL AH HFVTSLDFH+ PY
Sbjct: 130 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 189
Query: 391 VVTGSVDKTVKVWECR 406
VVTGSVD+TVKVWECR
Sbjct: 190 VVTGSVDQTVKVWECR 205
Score = 239 (89.2 bits), Expect = 6.3e-20, P = 6.3e-20
Identities = 59/195 (30%), Positives = 95/195 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
+ GH V V P + S S D TI++W+ +TG + GH + V+ + +Q G
Sbjct: 17 MHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 76
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L+ SCS D ++++W ++T +C ++ H+H V +++ P S + S S AT
Sbjct: 77 LIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYS-SISE---------AT 126
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G V GH WVR + G + SC++D T RVW K L H+H V +
Sbjct: 127 GSEV----GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLD 182
Query: 282 W---APGVASESISE 293
+ AP V + S+ +
Sbjct: 183 FHKTAPYVVTGSVDQ 197
Score = 209 (78.6 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 61/205 (29%), Positives = 96/205 (46%)
Query: 129 TIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG 188
TI+LWD++ E R +HGH +V +A +G +VS S D ++K+W++ T C+KT G
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 189 HDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL 246
H V V PN D + S S D+T+++W VAT C L H V I +P+ +
Sbjct: 62 HREWVRMVR--PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 119
Query: 247 LASCSNDHTARV----WS---LATKETKAELR-GHDHTVECVAWAPGVASESIS---EAA 295
+S S + V W L K L D T+ + ++++
Sbjct: 120 -SSISEATGSEVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFV 178
Query: 296 XXXXXXXXXXYLATGSRDKTIKLWD 320
Y+ TGS D+T+K+W+
Sbjct: 179 TSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++ + SRDKTIK+W+V +G + T GH WVR V + G + SC +D+T+RVW A
Sbjct: 35 HIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 94
Query: 366 KRNMKTLEAHSHFVTSLDF 384
K L H H V + +
Sbjct: 95 KECKAELREHEHVVECISW 113
Score = 147 (56.8 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
TIKLWD + T+ GHD+ V V P G ++VS DKT+++W+ +KT
Sbjct: 2 TIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG 61
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H +V + ++ + + S D+TV+VW
Sbjct: 62 HREWVRMVRPNQDGTLIASCSNDQTVRVW 90
Score = 125 (49.1 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 23/73 (31%), Positives = 42/73 (57%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + V V+FH + SC++D T+R+WDY+ + L+ H V + F ++ +
Sbjct: 131 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 190
Query: 164 VSCSADMSLKLWD 176
V+ S D ++K+W+
Sbjct: 191 VTGSVDQTVKVWE 203
>CGD|CAL0005179 [details] [associations]
symbol:orf19.5410 species:5476 "Candida albicans" [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005179 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000922 GO:GO:0005874 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K01062 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 RefSeq:XP_717688.1
RefSeq:XP_717782.1 ProteinModelPortal:Q5A7Q6 STRING:Q5A7Q6
GeneID:3640588 GeneID:3640622 KEGG:cal:CaO19.12865
KEGG:cal:CaO19.5410 Uniprot:Q5A7Q6
Length = 486
Score = 344 (126.2 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 89/311 (28%), Positives = 147/311 (47%)
Query: 2 VLSQRQREELNKAVADYLL-----SN----GYLSALEGFKKDADLPAEVEKKYSGLLEKK 52
+L++RQ+ ELN A+ YL N LS L + VEK LEK+
Sbjct: 6 ILTERQQTELNHAIIQYLQPLCQQDNHVLLDQLSKLLNIDQSTQESNNVEK-VDNYLEKR 64
Query: 53 WTSVIRLQKKVIXXXXXXXXXX----XXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSP 108
W++V+RLQKK+I + + WIP+ K +
Sbjct: 65 WSTVLRLQKKIIDLENEISNLNNIINSTNSDNNGIILSKDKINWIPKGAVKQSYQCENI- 123
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEY---ERALHGHLDSVQDIAFD-QSGKLLV 164
V V HP L+ + D + +W+ + E+ + H ++ I F + L
Sbjct: 124 VTTVKLHPNLPLVLNGCNDGNLYIWNISNDDNTIPEKMIKAHTRAINKICFTYKKPYYLA 183
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDKTIKMWEVATGY 223
+CS+D+++K+WD + ++T+ GH+H V+ + F P + +L S SRDK I++W++ G
Sbjct: 184 TCSSDLTIKIWD-EKFNHIRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWDIFQGI 242
Query: 224 CVKTLTGHREWVRQIKV-SPD--GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
+K+ GH EW R + + S D G + +CSND +AR+ + A + GH H VE V
Sbjct: 243 SLKSFVGHSEWCRDLDIISSDTYGDFVLTCSNDQSARLSHANSGAGVAMIVGHSHVVETV 302
Query: 281 AWAPGVASESI 291
+ P + + I
Sbjct: 303 KFLPSLQANKI 313
Score = 166 (63.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 62/248 (25%), Positives = 107/248 (43%)
Query: 162 LLVSCSADMSLKLWDMSTYQCL---KTMQGHDHNVTGVAFLPNSDFVLSA-SRDKTIKMW 217
+L C+ D +L +W++S K ++ H + + F + L+ S D TIK+W
Sbjct: 136 VLNGCN-DGNLYIWNISNDDNTIPEKMIKAHTRAINKICFTYKKPYYLATCSSDLTIKIW 194
Query: 218 EVATGYCVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
+ + ++TL GH V I+ SP D ++L S S D RVW + + GH
Sbjct: 195 DEKFNH-IRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWDIFQGISLKSFVGHSE- 252
Query: 277 VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336
W + + IS ++ T S D++ +L SG+ + ++GH +
Sbjct: 253 -----WCRDL--DIISS-------DTYGDFVLTCSNDQSARLSHANSGAGVAMIVGHSHV 298
Query: 337 VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR-AHPYVVTGS 395
V V K+L S +K L + T N T+ + +++ Y +T S
Sbjct: 299 VETV------KFLPSLQANKILDEYITKNTEQFPTIPLE--LLKDKTYNQLGFKYCITAS 350
Query: 396 VDKTVKVW 403
D T+K+W
Sbjct: 351 RDNTIKLW 358
Score = 166 (63.5 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 73/263 (27%), Positives = 116/263 (44%)
Query: 98 EKF----ALSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDYETGEYERALHGHLDSVQ 152
EKF L+GH V + F PV S++ S S D IR+WD G ++ GH + +
Sbjct: 196 EKFNHIRTLNGHEHTVSSIQFSPVDNSILYSVSRDKNIRVWDIFQGISLKSFVGHSEWCR 255
Query: 153 D---IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
D I+ D G +++CS D S +L ++ + + GH H V V FLP+ L A+
Sbjct: 256 DLDIISSDTYGDFVLTCSNDQSARLSHANSGAGVAMIVGHSHVVETVKFLPS----LQAN 311
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLATKETKA 268
K + E T + T E ++ + G + S D+T ++W L T A
Sbjct: 312 --KILD--EYITKNTEQFPTIPLELLKDKTYNQLGFKYCITASRDNTIKLW-LIPPPTIA 366
Query: 269 ELRGH--DHTVECVAWAPGVAS-ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV---- 321
R +W +A + S ++ +GS DKTIK WD+
Sbjct: 367 PHRPPLPSKYNNSQSWL--IAELKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWDLSGLL 424
Query: 322 --GSGSLLFTLIGHDNWVRGVTF 342
G +++ T+IGHD ++ + F
Sbjct: 425 ETGYVNVVKTIIGHDGFINDIDF 447
Score = 133 (51.9 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD------TANKRNMKTLEAHSHFV 379
L+ L GH +WV+ + HP GK+++S DDKT++ WD T +KT+ H F+
Sbjct: 383 LIAELKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWDLSGLLETGYVNVVKTIIGHDGFI 442
Query: 380 TSLDFHR 386
+DF R
Sbjct: 443 NDIDFAR 449
Score = 78 (32.5 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 372 LEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
L+ HS +V SL H ++++GS DKT+K W+
Sbjct: 387 LKGHSSWVKSLCVHPNGKFIISGSDDKTIKFWD 419
Score = 41 (19.5 bits), Expect = 8.6e-47, Sum P(3) = 8.6e-47
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 392 VTGSVDKTVKVW 403
++GS D ++K+W
Sbjct: 474 ISGSADNSIKLW 485
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 354 (129.7 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 79/228 (34%), Positives = 117/228 (51%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V V+F L+AS S D T+R+W+ TG H DSV ++F +
Sbjct: 343 LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSR 402
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S S ++K+WD T ++GHD V V+F P+S + SAS D+T+K+W AT
Sbjct: 403 RLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAAT 462
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G +TL GH +WVR + S D L+AS S+D T ++W AT + L HD+ V V
Sbjct: 463 GSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVV 522
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT 329
++ S ++ A+ ATGS + T++ D S+ F+
Sbjct: 523 FSHD--SRLLASASDDMTVKIWDT--ATGSLENTLEGHDDRVNSVSFS 566
Score = 338 (124.0 bits), Expect = 7.3e-31, Sum P(2) = 7.3e-31
Identities = 66/162 (40%), Positives = 93/162 (57%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V V F P L+AS S+D T+++W TG +R L GH D V+ + F +
Sbjct: 427 LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSR 486
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L+ S S DM++K+WD +T ++ HD+ V V F +S + SAS D T+K+W+ AT
Sbjct: 487 LIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTAT 546
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
G TL GH + V + SPD LLAS S+D T ++W AT
Sbjct: 547 GSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAAT 588
Score = 336 (123.3 bits), Expect = 7.8e-29, P = 7.8e-29
Identities = 77/226 (34%), Positives = 114/226 (50%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V+ V F +AS S+ +++WD TG + L GH D V ++F +LL
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA 447
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
S S D ++K+W +T +T++GH+ V V F +S + SAS D T+K+W+ AT
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPL 507
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
L H WVR + S D LLAS S+D T ++W AT + L GHD V V+++P
Sbjct: 508 QNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP 567
Query: 285 GVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
+S A+ Y ATG+ T +D GSG + +L
Sbjct: 568 ----DSRLLASASDDGTVKIWYAATGTVQHT---FD-GSGRVAISL 605
Score = 329 (120.9 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 65/182 (35%), Positives = 100/182 (54%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V V+F L+AS S+D T+++WD TG +R L GH DSV+ + F +
Sbjct: 301 LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSR 360
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L+ S S D ++++W+ +T T + H+ +V V+F +S + SAS +K+W+ T
Sbjct: 361 LIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRT 420
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G L GH + V + SPD LLAS S+D T ++W AT + L GH+ V V
Sbjct: 421 GSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVV 480
Query: 282 WA 283
++
Sbjct: 481 FS 482
Score = 284 (105.0 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 61/187 (32%), Positives = 95/187 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V V+F L+AS S+D T+++WD T + L H + V+ + F +
Sbjct: 469 LEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSR 528
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
LL S S DM++K+WD +T T++GHD V V+F P+S + SAS D T+K+W AT
Sbjct: 529 LLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAAT 588
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G T G + S LLAS +D T ++W + + DH ++ +
Sbjct: 589 GTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYSLRHTF-DLDHEIQRIQ 647
Query: 282 WAPGVAS 288
+ ++S
Sbjct: 648 FDKSMSS 654
Score = 212 (79.7 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 39/98 (39%), Positives = 59/98 (60%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S D+T+K+W +GSL TL GH++WVR V F + + S DD T+++WDTA
Sbjct: 446 LASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATV 505
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
LE+H ++V S+ F + + S D TVK+W+
Sbjct: 506 PLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWD 543
Score = 210 (79.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 40/97 (41%), Positives = 59/97 (60%)
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL 246
+GHD V V+F +S + SAS D T+K+W+ AT + TL GH EWV+ + S D L
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRL 319
Query: 247 LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
LAS S+D T ++W AT + L+GH+ +V V ++
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS 356
Score = 209 (78.6 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 58/209 (27%), Positives = 98/209 (46%)
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKT---LTGHREWVRQI-KVSPDGTLLASCSNDHT 255
P+ ++ + +TI W A G +T L+ + R I K S D LL + +
Sbjct: 172 PDDGKLVGSFLRRTILYWLGALGLIQETASALSSMQRLERFIRKRSSDIDLLDVVEDSYR 231
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKT 315
+W+++ + A L+ + + ++P + A LA+ S D T
Sbjct: 232 FALWNISGIKC-APLQVY---ASALLFSPA-QFKGHDRAVGSVSFSHDSRLLASASGDGT 286
Query: 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+K+WD + L TL GH+ WV+ V F + L S DD T+++WDTA + L+ H
Sbjct: 287 VKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGH 346
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ V S+ F + +GS D+TV++WE
Sbjct: 347 NDSVRSVVFSHDSRLIASGSNDRTVRIWE 375
Score = 197 (74.4 bits), Expect = 1.5e-45, Sum P(2) = 1.5e-45
Identities = 39/97 (40%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S D T+K+WD + L L HDNWVR V F + L S DD T+++WDTA
Sbjct: 488 IASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATG 547
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
TLE H V S+ F + + S D TVK+W
Sbjct: 548 SLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
Score = 194 (73.4 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 37/98 (37%), Positives = 56/98 (57%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S +K+WD +GSL L GHD+ V V+F P + L S DD+T+++W A
Sbjct: 404 LASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATG 463
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+TLE H+ +V S+ F + + S D TVK+W+
Sbjct: 464 SLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWD 501
Score = 179 (68.1 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 36/98 (36%), Positives = 51/98 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S D T+K+WD +GSL TL GHD+ V V+F P + L S DD T+++W A
Sbjct: 530 LASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATG 589
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
T + SL F + + D TVK+W+
Sbjct: 590 TVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Score = 163 (62.4 bits), Expect = 1.8e-25, Sum P(2) = 1.8e-25
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+GS D+T+++W+ +G L T H++ V V+F + L S D +++WDT
Sbjct: 362 IASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTG 421
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
LE H V S+ F + + S D+TVK+W
Sbjct: 422 SLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIW 458
Score = 162 (62.1 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S D T+K+WD +G+L L GH++ VR V F + + S +D+T+R+W+T
Sbjct: 320 LASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG 379
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
T E H V ++ F + + S VK+W+ R
Sbjct: 380 LLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTR 419
Score = 48 (22.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTL-IGHD 334
LA+ D T+K+WD+ SL T + H+
Sbjct: 614 LASAMDDGTVKIWDMEIYSLRHTFDLDHE 642
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 362 (132.5 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 72/183 (39%), Positives = 102/183 (55%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
AL GH + V+ V + L+AS S+D T+++WD ETG + L GH D V+ + F
Sbjct: 291 ALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDS 350
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+LL S S D ++K+WD T T++GH V V F +S + SAS D T+K+W+
Sbjct: 351 RLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 409
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
TG TL GHR+WVR + S D LLAS S+D T ++W T + L GH V V
Sbjct: 410 TGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSV 469
Query: 281 AWA 283
++
Sbjct: 470 IFS 472
Score = 351 (128.6 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 73/182 (40%), Positives = 99/182 (54%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V VIF L+AS S D+T+++WD TG + L GH D V+ + F +
Sbjct: 334 LEGHSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 392
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
LL S S D ++K+WD T T++GH V V F +S + SAS D T+K+W+ T
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGT 452
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G TL GHR+WVR + S D LLAS S+D T R+W K L GH V V+
Sbjct: 453 GSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
Query: 282 WA 283
++
Sbjct: 513 FS 514
Score = 322 (118.4 bits), Expect = 2.3e-28, P = 2.3e-28
Identities = 67/179 (37%), Positives = 96/179 (53%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GHR V VIF L+AS S+D+T+++WD TG + L GH D V+ + F +
Sbjct: 375 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 434
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
LL S S D ++K+WD T T++GH V V F +S + SAS D+T+++W+
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEK 494
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
G TL GH V + S D LLAS SND T R+W + + + D T+E +
Sbjct: 495 GSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTF-DLDATIEAM 552
Score = 265 (98.3 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 54/142 (38%), Positives = 78/142 (54%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
+AL GH +V +++ +LL S S D ++K+WD T T++GH V V F +
Sbjct: 290 QALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD 349
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
S + SAS D T+K+W+ TG TL GHR+WVR + S D LLAS S+D T ++W
Sbjct: 350 SRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDT 408
Query: 262 ATKETKAELRGHDHTVECVAWA 283
T + L GH V V ++
Sbjct: 409 GTGSLQHTLEGHRDWVRSVIFS 430
Score = 240 (89.5 bits), Expect = 3.1e-42, Sum P(2) = 3.1e-42
Identities = 44/98 (44%), Positives = 61/98 (62%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S D T+K+WD G+GSL TL GH +WVR V F + L S DD+T+R+WDT
Sbjct: 436 LASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKG 495
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TLE HS VTS+ F + + S D+TV++W+
Sbjct: 496 SHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD 533
Score = 220 (82.5 bits), Expect = 4.0e-30, Sum P(2) = 4.0e-30
Identities = 41/98 (41%), Positives = 58/98 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S D T+K+WD G+GSL TL GH +WVR V F + L S DD T+++WDT
Sbjct: 394 LASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG 453
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TLE H +V S+ F + + S D+TV++W+
Sbjct: 454 SLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWD 491
Score = 215 (80.7 bits), Expect = 9.6e-15, P = 9.6e-15
Identities = 42/98 (42%), Positives = 57/98 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ S D T+K+WD G+GSL TL GH +WVR V F + L S DD T+++WDT
Sbjct: 353 LASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTG 411
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TLE H +V S+ F + + S D TVK+W+
Sbjct: 412 SLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Score = 200 (75.5 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 48/141 (34%), Positives = 68/141 (48%)
Query: 265 ETKAELRGHDHTVECVAWAPGV-ASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGS 323
ETK ++ H W+P + A E A LA+ S D+T+K+WD +
Sbjct: 276 ETKPDVANH--------WSPCLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTET 327
Query: 324 GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLD 383
GSL TL GH + VR V F + L S D T+++WDT TLE H +V S+
Sbjct: 328 GSLQHTLEGHSDLVRSVIFSHDSRLLASASDS-TVKIWDTGTGSLQHTLEGHRDWVRSVI 386
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
F + + S D TVK+W+
Sbjct: 387 FSHDSQLLASASDDSTVKIWD 407
Score = 182 (69.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 38/102 (37%), Positives = 57/102 (55%)
Query: 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241
CL+ ++GH+ V V++ +S + SAS D+T+K+W+ TG TL GH + VR + S
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 242 PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
D LLAS S D T ++W T + L GH V V ++
Sbjct: 348 HDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS 388
Score = 59 (25.8 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFT 329
LA+ S D+T+++WD+ + SL T
Sbjct: 520 LASASNDQTVRIWDIEARSLQHT 542
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 115/334 (34%), Positives = 157/334 (47%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
PE L GH + V F P L+AS S D TI+LWD +G ++ L GH SVQ +AF
Sbjct: 32 PELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAF 91
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+G+LL S S+D ++KLW+ ++ TM+GH V VAF PN ++
Sbjct: 92 SPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNG------------QL 139
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
W A G T+ GH +WV + SPDG LLAS S + T ++W AT K L GH +
Sbjct: 140 WNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNW 199
Query: 277 V---------ECVA----------WAPGVAS-----ESISEAAXXXXXXXXXXYLATGSR 312
V +A W P S E S LA+GS
Sbjct: 200 VLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSS 259
Query: 313 DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN---KRNM 369
D TIKLWD +GS TL GH + V V F P + L S D T+++WD A K +M
Sbjct: 260 DATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSM 319
Query: 370 KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+T V S++F P ++T +++ W
Sbjct: 320 RT----PGIVRSIEFSIELPQLITNLGTFSIQAW 349
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 93/275 (33%), Positives = 133/275 (48%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
+ L GH D ++ + F G+LL S S D ++KLWD ++ +T++GH +V VAF PN
Sbjct: 35 QTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPN 94
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL--ASCSNDHTARV- 258
+ S S D TIK+W A+ T+ GH + V + SP+G L A S HT
Sbjct: 95 GQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGH 154
Query: 259 --WSLATK-ETKAELRGHDHTVECVA-WAPGVAS--ESI---SEAAXXXXXXXXXXYLAT 309
W L+ +L + + W ++ S LA+
Sbjct: 155 SDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLLAS 214
Query: 310 GSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM 369
GS D TIKLWD SGSL TL GH N + + F P G+ L S D T+++WDTA
Sbjct: 215 GSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFR 274
Query: 370 KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL+ HS V S+ F + +GS D T+K+W+
Sbjct: 275 HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 70/181 (38%), Positives = 96/181 (53%)
Query: 92 WIPRAPE-KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P K + GH V+ V F P L+AS S + TI+LWD T + L GH +
Sbjct: 140 WNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNW 199
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V + F G+LL S S D ++KLWD + T++GH + + +AF PN + S S
Sbjct: 200 VLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSS 259
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D TIK+W+ ATG TL GH + V + SPD LL S S D+T ++W AT K +
Sbjct: 260 DATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWDPATGILKHSM 319
Query: 271 R 271
R
Sbjct: 320 R 320
Score = 164 (62.8 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 33/80 (41%), Positives = 47/80 (58%)
Query: 324 GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLD 383
G L TL GH +W+ VTF P G+ L S +D T+++WD A+ +TLE HS V S+
Sbjct: 31 GPELQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA 90
Query: 384 FHRAHPYVVTGSVDKTVKVW 403
F + +GS D T+K+W
Sbjct: 91 FSPNGQLLASGSSDTTIKLW 110
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 103/327 (31%), Positives = 172/327 (52%)
Query: 81 APTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEY 140
A T++K +P + P KF L+GH V V F P +AS S D I++W G++
Sbjct: 22 AATQSKPTPVK--PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
E+ + GH + D+A+ LLVS S D +LK+WD+S+ +CLKT++GH + V F P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
S+ ++S S D+++++W+V TG C+KTL H + V + + DG+L+ S S D R+W
Sbjct: 140 QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Query: 261 LATKETKAELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW 319
A+ + L D+ V V ++P + I AA Y S+ K +K +
Sbjct: 200 TASGQCLKTLIDDDNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTY 252
Query: 320 DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV 379
G + + + N+ VT GGK++VS +D + +W+ K ++ L+ H+ V
Sbjct: 253 -TGHKNEKYCIFA--NF--SVT---GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 304
Query: 380 TSLDFHRAHPYVVTGSV--DKTVKVWE 404
S H + + ++ DKT+K+W+
Sbjct: 305 ISTACHPTENIIASAALENDKTIKLWK 331
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + LVS DDKTL++WD ++
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS++V +F+ +V+GS D++V++W+ +
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/325 (31%), Positives = 171/325 (52%)
Query: 83 TRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER 142
T++K +P + P KF L+GH V V F P +AS S D I++W G++E+
Sbjct: 24 TQSKPTPVK--PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH + D+A+ LLVS S D +LK+WD+S+ +CLKT++GH + V F P S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ ++S S D+++++W+V TG C+KTL H + V + + DG+L+ S S D R+W A
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 263 TKETKAELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+ + L D+ V V ++P + I AA Y S+ K +K +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTY-T 253
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTS 381
G + + + N+ VT GGK++VS +D + +W+ K ++ L+ H+ V S
Sbjct: 254 GHKNEKYCIFA--NF--SVT---GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIS 306
Query: 382 LDFHRAHPYVVTGSV--DKTVKVWE 404
H + + ++ DKT+K+W+
Sbjct: 307 TACHPTENIIASAALENDKTIKLWK 331
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + LVS DDKTL++WD ++
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS++V +F+ +V+GS D++V++W+ +
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
S SA S Y T+ GH V+ V F PN +++ S+S DK IK+W G
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
KT++GH+ + + S D LL S S+D T ++W +++ + L+GH + V C + P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/325 (31%), Positives = 171/325 (52%)
Query: 83 TRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER 142
T++K +P + P KF L+GH V V F P +AS S D I++W G++E+
Sbjct: 24 TQSKPTPVK--PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH + D+A+ LLVS S D +LK+WD+S+ +CLKT++GH + V F P S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ ++S S D+++++W+V TG C+KTL H + V + + DG+L+ S S D R+W A
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 263 TKETKAELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+ + L D+ V V ++P + I AA Y S+ K +K +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTY-T 253
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTS 381
G + + + N+ VT GGK++VS +D + +W+ K ++ L+ H+ V S
Sbjct: 254 GHKNEKYCIFA--NF--SVT---GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIS 306
Query: 382 LDFHRAHPYVVTGSV--DKTVKVWE 404
H + + ++ DKT+K+W+
Sbjct: 307 TACHPTENIIASAALENDKTIKLWK 331
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + LVS DDKTL++WD ++
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS++V +F+ +V+GS D++V++W+ +
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
S SA S Y T+ GH V+ V F PN +++ S+S DK IK+W G
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
KT++GH+ + + S D LL S S+D T ++W +++ + L+GH + V C + P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/325 (31%), Positives = 171/325 (52%)
Query: 83 TRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER 142
T++K +P + P KF L+GH V V F P +AS S D I++W G++E+
Sbjct: 24 TQSKPTPVK--PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH + D+A+ LLVS S D +LK+WD+S+ +CLKT++GH + V F P S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ ++S S D+++++W+V TG C+KTL H + V + + DG+L+ S S D R+W A
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 263 TKETKAELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+ + L D+ V V ++P + I AA Y S+ K +K +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTY-T 253
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTS 381
G + + + N+ VT GGK++VS +D + +W+ K ++ L+ H+ V S
Sbjct: 254 GHKNEKYCIFA--NF--SVT---GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIS 306
Query: 382 LDFHRAHPYVVTGSV--DKTVKVWE 404
H + + ++ DKT+K+W+
Sbjct: 307 TACHPTENIIASAALENDKTIKLWK 331
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + LVS DDKTL++WD ++
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS++V +F+ +V+GS D++V++W+ +
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
S SA S Y T+ GH V+ V F PN +++ S+S DK IK+W G
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
KT++GH+ + + S D LL S S+D T ++W +++ + L+GH + V C + P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 102/325 (31%), Positives = 171/325 (52%)
Query: 83 TRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER 142
T++K +P + P KF L+GH V V F P +AS S D I++W G++E+
Sbjct: 24 TQSKPTPVK--PNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK 81
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH + D+A+ LLVS S D +LK+WD+S+ +CLKT++GH + V F P S
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS 141
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ ++S S D+++++W+V TG C+KTL H + V + + DG+L+ S S D R+W A
Sbjct: 142 NLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 201
Query: 263 TKETKAELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+ + L D+ V V ++P + I AA Y S+ K +K +
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTY-T 253
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTS 381
G + + + N+ VT GGK++VS +D + +W+ K ++ L+ H+ V S
Sbjct: 254 GHKNEKYCIFA--NF--SVT---GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVIS 306
Query: 382 LDFHRAHPYVVTGSV--DKTVKVWE 404
H + + ++ DKT+K+W+
Sbjct: 307 TACHPTENIIASAALENDKTIKLWK 331
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + LVS DDKTL++WD ++
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS++V +F+ +V+GS D++V++W+ +
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
S SA S Y T+ GH V+ V F PN +++ S+S DK IK+W G
Sbjct: 20 SSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF 79
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
KT++GH+ + + S D LL S S+D T ++W +++ + L+GH + V C + P
Sbjct: 80 EKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP 139
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 101/319 (31%), Positives = 166/319 (52%)
Query: 89 PTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHL 148
PT P KF L+GH V V F P +AS S D I++W G++E+ + GH
Sbjct: 2 PTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 61
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
+ D+A+ LLVS S D +LK+WD+S+ +CLKT++GH + V F P S+ ++S
Sbjct: 62 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 121
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
S D+++++W+V TG C+KTL H + V + + DG+L+ S S D R+W A+ +
Sbjct: 122 SFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLK 181
Query: 269 ELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLL 327
L D+ V V ++P + I AA Y S+ K +K + G +
Sbjct: 182 TLIDDDNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTY-TGHKNEK 233
Query: 328 FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRA 387
+ + N+ VT GGK++VS +D + +W+ K ++ L+ H+ V S H
Sbjct: 234 YCIFA--NF--SVT---GGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT 286
Query: 388 HPYVVTGSV--DKTVKVWE 404
+ + ++ DKT+K+W+
Sbjct: 287 ENIIASAALENDKTIKLWK 305
Score = 198 (74.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + LVS DDKTL++WD ++
Sbjct: 33 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 92
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS++V +F+ +V+GS D++V++W+ +
Sbjct: 93 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 133
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 244 (91.0 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 53/193 (27%), Positives = 89/193 (46%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H + V V F + + S+D TI++W ++ +L H++
Sbjct: 89 WVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINW 148
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+ S S D ++KLWD ++ +C+ + H V F P+ + +A
Sbjct: 149 VRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGT 208
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
DKT+K+W+V ++ H V + P G L + SND T ++ L L
Sbjct: 209 DKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTL 268
Query: 271 RGHDHTVECVAWA 283
GH CVA++
Sbjct: 269 HGHQGPATCVAFS 281
Score = 243 (90.6 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 51/185 (27%), Positives = 88/185 (47%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ L GH+ V+ V F P L+AS S D T+ LW H +V+ + F
Sbjct: 56 YCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSD 115
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ LV+ S D ++K+W + + L ++ H + V F P+ + SAS DKT+K+W+
Sbjct: 116 GQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDK 175
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ C+ + H + ++ P GT +A+ D T +VW + + H V
Sbjct: 176 TSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNS 235
Query: 280 VAWAP 284
+++ P
Sbjct: 236 LSFHP 240
Score = 238 (88.8 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 55/162 (33%), Positives = 83/162 (51%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GHR + V F +AS S D+ +++W + L GH D+V + F SG L+
Sbjct: 18 GHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLV 77
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++ LW S + H V V F + +++AS DKTIK+W V
Sbjct: 78 ASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQK 137
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ +L+ H WVR + SPDG L+AS S+D T ++W ++E
Sbjct: 138 FLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRE 179
Score = 226 (84.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 50/138 (36%), Positives = 67/138 (48%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXX-----XXXXXYLATGSRDKTIKLWDVGSGSLLF 328
D TV C+ W P V ES A L T S DKTIK+W V LF
Sbjct: 83 DKTV-CL-WVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLF 140
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ + S DDKT+++WD ++ + + H F ++FH +
Sbjct: 141 SLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSG 200
Query: 389 PYVVTGSVDKTVKVWECR 406
+ DKTVKVW+ R
Sbjct: 201 TCIAAAGTDKTVKVWDVR 218
Score = 211 (79.3 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W + R F+LS H + V F P L+AS S+D T++LWD + E + H
Sbjct: 131 WTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGF 190
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ F SG + + D ++K+WD+ + L+ Q H V ++F P+ +++++AS
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASN 250
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
D T+K+ ++ G + TL GH+ + S G AS +D VW
Sbjct: 251 DSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 203 (76.5 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 47/149 (31%), Positives = 68/149 (45%)
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG 195
E ER GH D++ + F + K L S S D LK+W M + GH V
Sbjct: 8 EDPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMC 67
Query: 196 VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
V F P+ V S SRDKT+ +W + H VR + S DG L + S+D T
Sbjct: 68 VQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKT 127
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAP 284
+VW++ ++ L H + V C ++P
Sbjct: 128 IKVWTVHRQKFLFSLSQHINWVRCARFSP 156
Score = 195 (73.7 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DKT+KLWD S + + H + V FHP G + + G DKT++VWD
Sbjct: 161 IASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMN 220
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + H+ V SL FH + Y++T S D T+K+
Sbjct: 221 RLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKI 256
Score = 169 (64.5 bits), Expect = 9.1e-36, Sum P(2) = 9.1e-36
Identities = 34/98 (34%), Positives = 50/98 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A DKT+K+WDV LL H V ++FHP G YL++ +D TL++ D
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG 262
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T + F R + +G D+ V VW+
Sbjct: 263 RLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 162 (62.1 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V FHP + +A+ D T+++WD + H +V ++F SG L++ S D +
Sbjct: 194 VEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDST 253
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
LK+ D+ + L T+ GH T VAF DF S D+ + +W+
Sbjct: 254 LKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 159 (61.0 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS D +K+W + + L+GH + V V F P G + S DKT+ +W + K
Sbjct: 35 LASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVK 94
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+AH+ V S+ F +VT S DKT+KVW
Sbjct: 95 GESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Score = 158 (60.7 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 37/100 (37%), Positives = 55/100 (55%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
+A+GSRDKT+ LW V S +F H VR V F G+ LV+ DDKT++VW
Sbjct: 77 VASGSRDKTVCLWVPSVKGESTVFK--AHTATVRSVHFSSDGQSLVTASDDKTIKVWTVH 134
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ + +L H ++V F + + S DKTVK+W+
Sbjct: 135 RQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWD 174
Score = 113 (44.8 bits), Expect = 1.6e-30, Sum P(2) = 1.6e-30
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363
YL T S D T+K+ D+ G LL+TL GH V F G + S G D+ + VW T
Sbjct: 244 YLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKT 301
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 100/324 (30%), Positives = 168/324 (51%)
Query: 84 RAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA 143
++K +P + P KF L+GH V V F P +AS S D I++W G++E+
Sbjct: 25 QSKPAPVK--PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 82
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
+ GH + D+A+ LLVS S D +LK+WD+S+ +CLKT++GH + V F P S+
Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN 142
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
++S S D+++++W+V TG C+KTL H + V + + DG+L+ S S D R+W A+
Sbjct: 143 LIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS 202
Query: 264 KETKAELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVG 322
+ L D+ V V ++P + I AA Y S+ K +K +
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTYTCH 255
Query: 323 SGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSL 382
+ + N+ VT GGK++VS +D + +W+ K ++ L+ H+ V S
Sbjct: 256 KNEK-YCIFA--NF--SVT---GGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVIST 307
Query: 383 DFHRAHPYVVTGSV--DKTVKVWE 404
H + + ++ DKT+K+W+
Sbjct: 308 ACHPTENIIASAALENDKTIKLWK 331
Score = 198 (74.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 36/101 (35%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + LVS DDKTL++WD ++
Sbjct: 59 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 118
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS++V +F+ +V+GS D++V++W+ +
Sbjct: 119 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 97/324 (29%), Positives = 163/324 (50%)
Query: 90 TEWIPRAPE---KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHG 146
TE IP+ P K+ L GH + V F P +AS S D TI++W G++ER L G
Sbjct: 27 TESIPQTPNYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEG 86
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
H + + DIA+ Q KL+ S S D ++K+WD+ + + +KT++GH V GV+F P S+ ++
Sbjct: 87 HKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIV 146
Query: 207 SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET 266
S S D+ +++W+V TG C K ++ H + V + + DGTL+ S S D T R+W T +
Sbjct: 147 SGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQL 206
Query: 267 KAELRGHD-HTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
+ D V V ++P + A Y + K +K
Sbjct: 207 LNTISTEDGKEVSFVKFSP---NGKFVLAGTLDNTLRLWSY---NNNKKCLK-------- 252
Query: 326 LLFTLIGHDNWVRGV--TFHPG-GKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSL 382
T GH N + TF GK++V+ +D + +++ + ++TL H V ++
Sbjct: 253 ---TYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTV 309
Query: 383 DFHRAHPYVVTGSV--DKTVKVWE 404
H + +G++ D++VK+W+
Sbjct: 310 ACHPTENIIASGALEKDRSVKIWK 333
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 95/311 (30%), Positives = 153/311 (49%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-----GEYERALHGHLDSVQDIAF 156
L+ H V V F L+AS S D TIR + T E + GH + + D+AF
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ +VS S D +LKLWD+ T +KT+ GH + V F P S+ ++S S D+T+++
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE-TKAELRGHDH 275
W+V TG C+K L H + V + + DG+L+ S S D R+W T K + +
Sbjct: 140 WDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENP 199
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
V V ++P ++ G+ D T++LW++ S L T GH N
Sbjct: 200 PVSFVRFSPN------------------GKFILVGTLDNTLRLWNISSAKFLKTYTGHVN 241
Query: 336 --WVRGVTFH-PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
+ F GK +VS +D + +W+ +K+ ++ LE H+ V ++ H +
Sbjct: 242 AQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIA 301
Query: 393 TGSVDKTVKVW 403
+GS+DKTV++W
Sbjct: 302 SGSLDKTVRIW 312
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 79/274 (28%), Positives = 136/274 (49%)
Query: 140 YERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY-----QCLKTMQGHDHNVT 194
+ + L H +V + F G+LL S SAD +++ + ++T + ++ GH++ ++
Sbjct: 16 HSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGIS 75
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254
VAF ++ F++SAS DKT+K+W+V TG +KTL GH + + +P ++ S S D
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDK 314
T R+W + T + L H V V + + + S D
Sbjct: 136 TVRIWDVTTGKCLKVLPAHSDPVTAVDF------------------NRDGSLIVSSSYDG 177
Query: 315 TIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
++WD G+G + TLI +N V V F P GK+++ D TLR+W+ ++ + +KT
Sbjct: 178 LCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYT 237
Query: 374 AH--SHFVTSLDFHRAH-PYVVTGSVDKTVKVWE 404
H + + S F + +V+GS D V +WE
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWE 271
Score = 220 (82.5 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 52/163 (31%), Positives = 82/163 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL-HGHLDSVQDIAFDQSG 160
L H PV V F+ SL+ S S D R+WD TG + L V + F +G
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGH---DHNVTGVAFLPNSDFVLSASRDKTIKMW 217
K ++ + D +L+LW++S+ + LKT GH + ++ + N ++S S D + MW
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
E+ + ++ L GH E V + P L+AS S D T R+W+
Sbjct: 271 ELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313
Score = 160 (61.4 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDI--AF 156
K + PV V F P + + D T+RLW+ + ++ + GH+++ I AF
Sbjct: 191 KTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAF 250
Query: 157 D-QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
+GK +VS S D + +W++++ + L+ ++GH V VA P + + S S DKT++
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVR 310
Query: 216 MW 217
+W
Sbjct: 311 IW 312
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 296 (109.3 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 60/191 (31%), Positives = 95/191 (49%)
Query: 94 PRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQD 153
P+A F GH+ + V F P+ +L+AS S D TIRLW + H V+
Sbjct: 49 PQA-RAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRS 107
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+ F G+ L S S D S+K+W+M + L ++ H H V F P+ ++S S DKT
Sbjct: 108 VDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
IK+W+ CV + + + +P+GT +AS +DHT ++W + + + H
Sbjct: 168 IKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 227
Query: 274 DHTVECVAWAP 284
V CV++ P
Sbjct: 228 SGGVNCVSFHP 238
Score = 253 (94.1 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 58/195 (29%), Positives = 92/195 (47%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
WIP K + H +PV V F +AS SED +I++W+ + +L+ H
Sbjct: 87 WIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHW 146
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VSCS D ++K+WD + QC+ VAF PN + SA
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGS 206
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W++ ++ H V + P G L + S+D T ++ L L
Sbjct: 207 DHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTL 266
Query: 271 RGHDHTVECVAWAPG 285
+GH V V+++ G
Sbjct: 267 QGHTGPVFTVSFSKG 281
Score = 246 (91.7 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 56/174 (32%), Positives = 81/174 (46%)
Query: 94 PRAP--EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
P P E++ GH++ + V F P +A+ S D + LW GH D +
Sbjct: 5 PEDPVLERY-FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVI 63
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
+ F G LL S S D +++LW + H V V F + F+ SAS D
Sbjct: 64 TSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASED 123
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
K+IK+W + + +L H WVR K SPDG L+ SCS D T ++W K+
Sbjct: 124 KSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 208 (78.3 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 44/138 (31%), Positives = 70/138 (50%)
Query: 274 DHTVECVAWAP---GVASESISEAA--XXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLF 328
D T+ W P G +SE + A +LA+ S DK+IK+W++ L+
Sbjct: 81 DRTIRL--WIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLY 138
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H +WVR F P G+ +VSC +DKT+++WDT NK+ + F + F+
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNG 198
Query: 389 PYVVTGSVDKTVKVWECR 406
+ + D TVK+W+ R
Sbjct: 199 TCIASAGSDHTVKIWDIR 216
Score = 206 (77.6 bits), Expect = 6.7e-14, P = 6.7e-14
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
++L H V F P L+ SCSED TI++WD + + +AF+ +
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPN 197
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + S +D ++K+WD+ + L+ Q H V V+F P+ +++++AS D T+K+ ++
Sbjct: 198 GTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDL 257
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH V + S G L S D +W
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 199 (75.1 bits), Expect = 7.3e-22, Sum P(2) = 7.3e-22
Identities = 50/154 (32%), Positives = 70/154 (45%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
ER GH ++ + F +GK L + S D L LW + GH +T V F P
Sbjct: 11 ERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSP 70
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + SASRD+TI++W H VR + S DG LAS S D + +VW+
Sbjct: 71 LGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 261 LATKETKAELRGHDHTVECVAWAP-GVASESISE 293
+ + L H H V C ++P G S SE
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ SRD+TI+LW H VR V F G++L S +DK+++VW+ +
Sbjct: 75 LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQ 134
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + +L H+H+V F +V+ S DKT+K+W+
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 33/97 (34%), Positives = 51/97 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATGS D + LW + + F +GH + + V F P G L S D+T+R+W +
Sbjct: 33 LATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKR 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+AH+ V S+DF ++ + S DK++KVW
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVW 129
Score = 156 (60.0 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D T+K+WD+ LL H V V+FHP G YL++ D TL++ D
Sbjct: 201 IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL+ H+ V ++ F + +G D V +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 151 (58.2 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S DKTIK+WD + + + V F+P G + S G D T+++WD + ++
Sbjct: 163 SEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQ 222
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ HS V + FH + Y++T S D T+K+
Sbjct: 223 HYQVHSGGVNCVSFHPSGNYLITASSDGTLKI 254
Score = 124 (48.7 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 38/108 (35%), Positives = 54/108 (50%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-- 363
YL T S D T+K+ D+ G L++TL GH V V+F GG+ S G D + +W T
Sbjct: 242 YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLWRTNF 301
Query: 364 -------ANKRNMKTLEAHS--HFVTSLDFHRAHPYVVTGSVDKTVKV 402
+KRN+K L S H LD + P+ G +D TV++
Sbjct: 302 DELNYKDVSKRNLKRLHFDSPPHL---LDIYPRTPHPHEGRID-TVEI 345
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 97/314 (30%), Positives = 164/314 (52%)
Query: 94 PRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQD 153
P KF L+GH V V F P +AS S D I++W G++E+ + GH + D
Sbjct: 60 PNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISD 119
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+A+ +LLVS S D +LK+W++ST + LKT++GH + V F P S+ ++S S D++
Sbjct: 120 VAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDES 179
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+++W+V TG C+KTL H + V + + DG+L+ S S D R+W A+ + L
Sbjct: 180 VRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD 239
Query: 274 DHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
D+ V V ++P + I AA Y S+ K +K + G + + +
Sbjct: 240 DNPPVSFVKFSPN--GKYIL-AATLDNTLKLWDY----SKGKCLKTY-TGHKNEKYCIFA 291
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
N+ VT GGK++VS +D + +W+ +K ++ L+ H+ V H +
Sbjct: 292 --NF--SVT---GGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIA 344
Query: 393 TGSV--DKTVKVWE 404
+ ++ DKT+K+W+
Sbjct: 345 SAALENDKTIKLWK 358
Score = 201 (75.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 50/168 (29%), Positives = 81/168 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL-HGHLDSVQDIAFDQSG 160
L H PV V F+ SL+ S S D R+WD +G+ + L V + F +G
Sbjct: 194 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNG 253
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN---VTGVAFLPNSDFVLSASRDKTIKMW 217
K +++ + D +LKLWD S +CLKT GH + + + +++S S D + +W
Sbjct: 254 KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIW 313
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS--NDHTARVWSLAT 263
+ + V+ L GH + V P ++AS + ND T ++W T
Sbjct: 314 NLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKSDT 361
Score = 199 (75.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 37/101 (36%), Positives = 62/101 (61%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ S DK IK+W G T+ GH + V + + LVS DDKTL+VW+ +
Sbjct: 86 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELST 145
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+++KTL+ HS++V +F+ +V+GS D++V++W+ R
Sbjct: 146 GKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 39/128 (30%), Positives = 64/128 (50%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K + PV V F P + + + D T++LWDY G+ + GH + I +
Sbjct: 234 KTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANF 293
Query: 159 S---GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS--RDKT 213
S GK +VS S D + +W++ + + ++ +QGH V A P + + SA+ DKT
Sbjct: 294 SVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKT 353
Query: 214 IKMWEVAT 221
IK+W+ T
Sbjct: 354 IKLWKSDT 361
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 300 (110.7 bits), Expect = 7.2e-36, Sum P(3) = 7.2e-36
Identities = 57/157 (36%), Positives = 87/157 (55%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
SGH + FHP S +A+ S D+TI+LWD GE L GH +V + G
Sbjct: 399 SGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDF 458
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+ S S DM+ K+WD+++ +C T+ GH +V + F P S+ +L+AS DKT+ +W+ TG
Sbjct: 459 VASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTG 518
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
C ++L GH V +P G ++ASC ++W
Sbjct: 519 KCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLW 555
Score = 292 (107.8 bits), Expect = 5.6e-35, Sum P(3) = 5.6e-35
Identities = 62/180 (34%), Positives = 89/180 (49%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H PV ++ HP + SCSED ++ G GH D + F SG L
Sbjct: 359 HELPVSCIVMHPCRDYLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLA 418
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ S D ++KLWD++ +C T++GH+H V + DFV SAS D T K+W+V + C
Sbjct: 419 TSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERC 478
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
TL GH + V I+ P +L + S D T VW T + + L GH H+V + P
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 538
Score = 208 (78.3 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 48/182 (26%), Positives = 81/182 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V +H +AS S D T ++WD + L+GH DSV I F
Sbjct: 440 LEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSN 499
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+L++ SAD +L +WD T +C +++ GH H+V F P + S K+W+
Sbjct: 500 ILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTPRGHIIASCDARGVTKLWDFRK 559
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
+ ++ ++ G +LA S + + L + + +L GH+ V V
Sbjct: 560 LIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLDLKSGQIH-KLVGHESEVHSVV 618
Query: 282 WA 283
++
Sbjct: 619 FS 620
Score = 201 (75.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 48/161 (29%), Positives = 78/161 (48%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
++ L GH V + F P +++ + S D T+ +WD TG+ E++L+GH+ SV D F
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 538
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
G ++ SC A KLWD + ++ + V F + + AS + I + +
Sbjct: 539 RGHIIASCDARGVTKLWDFRKLIPIVSIDVGPSSGNEVNFDQSGRVLAQASANGIIHLLD 598
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+ +G K L GH V + S G L S +D T R+W
Sbjct: 599 LKSGQIHK-LVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 200 (75.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 40/100 (40%), Positives = 57/100 (57%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LAT S D TIKLWD+ G TL GH++ V T+H G ++ S D T ++WD ++
Sbjct: 417 LATSSGDSTIKLWDLNKGECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWDVNSE 476
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R TL H+ V S++F ++T S DKT+ VW+ R
Sbjct: 477 RCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDAR 516
Score = 188 (71.2 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL + S D+ K+ + G++L T GH +W+ G FHP G L + D T+++WD
Sbjct: 374 YLISCSEDRLWKMVGLPQGNVLLTGSGHTDWLSGCCFHPSGSKLATSSGDSTIKLWDLNK 433
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TLE H+H V S +H +V + S+D T K+W+
Sbjct: 434 GECTLTLEGHNHAVWSCTWHSCGDFVASASLDMTSKIWD 472
Score = 155 (59.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+ S D T K+WDV S +TL GH + V + F P L++ DKTL VWD
Sbjct: 458 FVASASLDMTSKIWDVNSERCRYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDART 517
Query: 366 KRNMKTLEAHSHFVTSLDFH-RAHPYVVTGSVDKTVKVWECR 406
+ ++L H H V F R H + + K+W+ R
Sbjct: 518 GKCEQSLYGHMHSVNDATFTPRGH-IIASCDARGVTKLWDFR 558
Score = 90 (36.7 bits), Expect = 7.2e-36, Sum P(3) = 7.2e-36
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
LA S + I L D+ SG + L+GH++ V V F G+ L S G D T+R+W
Sbjct: 585 LAQASANGIIHLLDLKSGQI-HKLVGHESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 55 (24.4 bits), Expect = 3.1e-32, Sum P(3) = 3.1e-32
Identities = 20/88 (22%), Positives = 37/88 (42%)
Query: 317 KLWDVGSGSLLFTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
KLWD + ++ +G + V F G+ L + + + D + + K L H
Sbjct: 553 KLWDFRKLIPIVSIDVGPSSG-NEVNFDQSGRVLAQASANGIIHLLDLKSGQIHK-LVGH 610
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
V S+ F + +G D T+++W
Sbjct: 611 ESEVHSVVFSHLGENLYSGGSDGTIRLW 638
Score = 47 (21.6 bits), Expect = 7.2e-36, Sum P(3) = 7.2e-36
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 23 GYLSALEGFKKDADLPAEVE 42
GY S L+ KKD++ P +++
Sbjct: 312 GYKSKLKNEKKDSEFPVDMQ 331
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 253 (94.1 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 54/185 (29%), Positives = 90/185 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+R+W H +V+ + F
Sbjct: 55 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+LLV+ S D ++K+W + L ++ H + V F P+ ++SAS DKT+K+W+
Sbjct: 115 GQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ CV + H +V + P GT +A+ D+T +VW T + H V
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNA 234
Query: 280 VAWAP 284
+++ P
Sbjct: 235 LSFHP 239
Score = 240 (89.5 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 58/181 (32%), Positives = 86/181 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GHR V V F +AS S D+T+ +W + GH D+V + F SG LL
Sbjct: 17 GHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++++W + + H V V F + +++AS DKT+K+W
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQR 136
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+ +LT H WVR K SPDG L+ S S+D T ++W ++E H V V +
Sbjct: 137 FLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH 196
Query: 284 P 284
P
Sbjct: 197 P 197
Score = 235 (87.8 bits), Expect = 9.0e-19, P = 9.0e-19
Identities = 54/193 (27%), Positives = 90/193 (46%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H + V V F L+ + S+D T+++W + +L H++
Sbjct: 88 WVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINW 147
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD ++ +C+ + H VT V F P+ + +A
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W+ T V+ H V + P G L + S+D T ++ L L
Sbjct: 208 DNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 271 RGHDHTVECVAWA 283
GH VA++
Sbjct: 268 HGHQGPATTVAFS 280
Score = 229 (85.7 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 50/138 (36%), Positives = 67/138 (48%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXX-----YLATGSRDKTIKLWDVGSGSLLF 328
D TV W P V ES A L T S DKT+K+W LF
Sbjct: 82 DKTVRI--WVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLF 139
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ +VS DDKT+++WD ++ + + H FVT +DFH +
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 389 PYVVTGSVDKTVKVWECR 406
+ +D TVKVW+ R
Sbjct: 200 TCIAAAGMDNTVKVWDTR 217
Score = 206 (77.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 47/160 (29%), Positives = 82/160 (51%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+L+ H + V F P L+ S S+D T++LWD + E + H V + F S
Sbjct: 139 FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + D ++K+WD T++ ++ Q H V ++F P+ +++++AS D T+K+ ++
Sbjct: 199 GTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 198 (74.8 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 48/149 (32%), Positives = 66/149 (44%)
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG 195
E ER GH D+V + F + K L S S D +L +W M GH VT
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 196 VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
V F P+ + S SRDKT+++W H VR + DG LL + S+D T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKT 126
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAP 284
+VWS + L H + V C ++P
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Score = 189 (71.6 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+KLWD S + + H +V V FHP G + + G D T++VWDT
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTH 219
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + HS V +L FH + Y++T S D T+K+
Sbjct: 220 RLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 176 (67.0 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+GSRDKT+++W +V S +F H VR V F G+ LV+ DDKT++VW T
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQLLVTASDDKTVKVWSTH 133
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+R + +L H ++V F +V+ S DKTVK+W+
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 167 (63.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 38/98 (38%), Positives = 50/98 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+GS D T+ +W + S + GH + V V F P G L S DKT+R+W
Sbjct: 33 HLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV 92
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
K AH+ V S+ F +VT S DKTVKVW
Sbjct: 93 KGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVW 130
Score = 162 (62.1 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 32/98 (32%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A D T+K+WD + L+ H V ++FHP G YL++ D TL++ D
Sbjct: 202 IAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T++ F R Y +G D+ V VW+
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 161 (61.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V FHP + +A+ D T+++WD T + H +V ++F SG L+
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ S+D +LK+ D+ + L T+ GH T VAF ++ S D+ + +W+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 120 (47.3 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW---- 361
YL T S D T+K+ D+ G LL+TL GH V F G+Y S G D+ + VW
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNF 302
Query: 362 DTANKRNMK 370
DT + +MK
Sbjct: 303 DTVDYGDMK 311
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 277 (102.6 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 52/151 (34%), Positives = 89/151 (58%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+AS D +IR+W + + +GH SV + F++ G +LVS S D + +WD+
Sbjct: 72 ALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDII 131
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T L ++GH +T V L S+ ++++S+D IK+W+ T +C++T+ GHR + I
Sbjct: 132 TESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGI 191
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAE 269
V+PD T L SC++D+ R W + + E + E
Sbjct: 192 DVNPDETRLCSCTSDNQIRFWRIPSNERQRE 222
Score = 189 (71.6 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 55/259 (21%), Positives = 115/259 (44%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH ++ ++ + ++LVS S++ S+K+W+M + C++++ D+ + V F P + V
Sbjct: 394 GHRSDIRSLSLSSNDQMLVSTSSE-SVKVWNMKSLSCIRSI-ACDYGLCTV-FAPGNLHV 450
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ ++ TI+++E+A+ V ++ H V + ++PD + S D + W E
Sbjct: 451 IVGTKTGTIEVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDF---E 507
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A H V ++ + ES +LA D T+K++ +
Sbjct: 508 LIASQENSKHKVLNLSLTKTLKVES---DVLALKYSADNKFLAVSLLDNTVKIFYTDTVK 564
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
+L GH V + +++ DK +++W K+ AH + + F
Sbjct: 565 FHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFI 624
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + ++ S DK +K W+
Sbjct: 625 PSTHHFISASKDKRIKYWD 643
Score = 185 (70.2 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 36/134 (26%), Positives = 73/134 (54%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D T++++ +T ++ +L+GH V + L+++ SAD ++K+W + C K+
Sbjct: 552 DNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSF 611
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL 246
HD ++ V+F+P++ +SAS+DK IK W+ ++T+ H V + + G
Sbjct: 612 FAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDF 671
Query: 247 LASCSNDHTARVWS 260
S S+D + R+++
Sbjct: 672 FISGSHDRSIRIFN 685
Score = 176 (67.0 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGH--LDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+ C E I +WD ++L+ V ++ + G LL S +D S+++W MS
Sbjct: 32 ITGCGE--RISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSMS 89
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
YQ GH +VT + F + ++S S+D + +W++ T + L GHR+ + +
Sbjct: 90 DYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSV 149
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
K+ L + S D ++W T+ + GH + +
Sbjct: 150 KLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPI 188
Score = 171 (65.3 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 32/117 (27%), Positives = 60/117 (51%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GHR V + F+ + +++ S S+D + +WD T L GH D + + +
Sbjct: 98 NGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNH 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
L++ S D +K+WD T C++T+ GH + + G+ P+ + S + D I+ W +
Sbjct: 158 LITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRI 214
Score = 167 (63.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 35/121 (28%), Positives = 65/121 (53%)
Query: 99 KFALS--GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
KF LS GH+ PV+ + +L+ + S D I++W + G+ ++ H DS+ ++F
Sbjct: 564 KFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSF 623
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
S +S S D +K WD ++ ++T++ H V +A DF +S S D++I++
Sbjct: 624 IPSTHHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRI 683
Query: 217 W 217
+
Sbjct: 684 F 684
Score = 156 (60.0 bits), Expect = 8.6e-35, Sum P(2) = 8.6e-35
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS DK IK+W + G + HD+ + V+F P + +S DK ++ WD
Sbjct: 588 IITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADKF 647
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+++T+EAH V SL + ++GS D++++++
Sbjct: 648 EHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIF 684
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+G D +I++W + L GH V +TF+ G LVS D + VWD +
Sbjct: 74 LASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L H +TS+ +++T S D +K+W+
Sbjct: 134 SGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWD 171
Score = 128 (50.1 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 41/193 (21%), Positives = 74/193 (38%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERALHGHLD---------- 149
++ H V ++ P + S D ++ WD+E E + H L+
Sbjct: 472 SIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQENSKHKVLNLSLTKTLKVE 531
Query: 150 -SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
V + + K L D ++K++ T + ++ GH V + +S +++
Sbjct: 532 SDVLALKYSADNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITG 591
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
S DK IK+W + G C K+ H + + Q+ P S S D + W E
Sbjct: 592 SADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWDADKFEHIQ 651
Query: 269 ELRGHDHTVECVA 281
+ H V +A
Sbjct: 652 TIEAHHGEVWSLA 664
Score = 123 (48.4 bits), Expect = 0.00034, P = 0.00034
Identities = 23/97 (23%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS+D + +WD+ + S LF L GH + + V +L++ D +++WDT +
Sbjct: 116 LVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQ 175
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++T+ H + + +D + + + + D ++ W
Sbjct: 176 HCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFW 212
Score = 119 (46.9 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 148 LDSVQDIAFDQSGKLLVS-CSADMSLKLWDMSTYQCLKTMQGHD--HNVTGVAFLPNSDF 204
L S + D SGKL ++ C +S+ WD+ +++ D VT V +
Sbjct: 16 LISTSNSILDGSGKLAITGCGERISI--WDLRKQVLNQSLYEEDIKAEVTNVCLSKDGAL 73
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
+ S D +I++W ++ GHR V + + G +L S S D VW + T+
Sbjct: 74 LASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
Query: 265 ETKAELRGHDHTVECV 280
LRGH + V
Sbjct: 134 SGLFRLRGHRDQITSV 149
Score = 110 (43.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-A 364
+L T S+D IK+WD + + T++GH N + G+ +P L SC D +R W +
Sbjct: 157 HLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPS 216
Query: 365 NKR 367
N+R
Sbjct: 217 NER 219
Score = 99 (39.9 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F L GHR + V + + + S+D I++WD ET + + GH + + I +
Sbjct: 137 FRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQTIVGHRNPIWGIDVNPD 196
Query: 160 GKLLVSCSADMSLKLW 175
L SC++D ++ W
Sbjct: 197 ETRLCSCTSDNQIRFW 212
Score = 71 (30.1 bits), Expect = 6.8e-26, Sum P(2) = 6.8e-26
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S+DK IK WD + T+ H V + G + +S D+++R+++
Sbjct: 629 HFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 71 (30.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYER 142
GHR+P+ + +P + + SC+ D IR W + E +R
Sbjct: 183 GHRNPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQR 221
Score = 49 (22.3 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184
E +Y ++ +SV + FD + K+L S + L+ ++ Y +K
Sbjct: 275 EFAKYYGSITVKAESVSGVRFDPTNKILAVQSTGKFVDLFKITHYDTMK 323
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 284 (105.0 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 56/181 (30%), Positives = 89/181 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH+ V + F P +L+AS S D T+RLW + H V+ + F G+ L
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFL 117
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
V+ S D S+K+W M + L ++ H H V F P+ ++S S DKTIK+W+ +
Sbjct: 118 VTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQ 177
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV + + + SP+GT +AS +DH R+W + + H V C+++
Sbjct: 178 CVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFH 237
Query: 284 P 284
P
Sbjct: 238 P 238
Score = 252 (93.8 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 55/174 (31%), Positives = 84/174 (48%)
Query: 94 PRAP--EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
P P E++ GH++ + F P +A+ S D + LW + GH D V
Sbjct: 5 PEDPILERY-FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVV 63
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
+ F G LL S S D +++LW + + H V V F + F+++AS D
Sbjct: 64 TSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASED 123
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
K+IK+W + + +L H WVR K SPDG L+ SCS D T ++W +K+
Sbjct: 124 KSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQ 177
Score = 220 (82.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 50/193 (25%), Positives = 87/193 (45%)
Query: 92 WI-PRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+ R + H +PV V F + + SED +I++W + +L+ H
Sbjct: 87 WVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHW 146
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VSCS D ++K+WD ++ QC+ V F PN + SA
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGS 206
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D +++W++ ++ H V + P G L + S+D T ++ L L
Sbjct: 207 DHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTL 266
Query: 271 RGHDHTVECVAWA 283
+GH V V+++
Sbjct: 267 QGHTGPVFTVSFS 279
Score = 198 (74.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 34/101 (33%), Positives = 56/101 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+L T S DK+IK+W + L++L H +WVR F P G+ +VSC +DKT+++WDT +
Sbjct: 116 FLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTS 175
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K+ + F +DF + + D V++W+ R
Sbjct: 176 KQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIR 216
Score = 198 (74.8 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
++L H V F P L+ SCSED TI++WD + + + + F +
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPN 197
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + S +D ++++WD+ + L+ Q H V ++F P+ + +++AS D T+K+ ++
Sbjct: 198 GTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDL 257
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH V + S DG L S D VW
Sbjct: 258 VEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 195 (73.7 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 47/154 (30%), Positives = 69/154 (44%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
ER GH ++ F + K + + S D L LW + + GH VT + F P
Sbjct: 11 ERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + SASRDKT+++W + H VR + S DG L + S D + +VWS
Sbjct: 71 QGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWS 130
Query: 261 LATKETKAELRGHDHTVECVAWAP-GVASESISE 293
+ + L H H V C ++P G S SE
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Score = 169 (64.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 34/98 (34%), Positives = 55/98 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ SRDKT++LW + H VR V F G++LV+ +DK+++VW +
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQ 134
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + +L H+H+V F +V+ S DKT+K+W+
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 164 (62.8 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 34/97 (35%), Positives = 51/97 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D + LW + + + +GH + V + F P G L S DKT+R+W K
Sbjct: 33 IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRK 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+AH+ V S+DF ++VT S DK++KVW
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVW 129
Score = 150 (57.9 bits), Expect = 2.4e-31, Sum P(2) = 2.4e-31
Identities = 33/92 (35%), Positives = 45/92 (48%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S DKTIK+WD S + + V F P G + S G D +R+WD R ++
Sbjct: 163 SEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQ 222
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ HS V L FH + +VT S D TVK+
Sbjct: 223 HYQVHSCGVNCLSFHPSGNSLVTASSDGTVKI 254
Score = 133 (51.9 bits), Expect = 1.4e-29, Sum P(2) = 1.4e-29
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D +++WD+ LL H V ++FHP G LV+ D T+++ D
Sbjct: 201 IASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL+ H+ V ++ F + +G D V VW
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 30/109 (27%), Positives = 52/109 (47%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P + +AS D +R+WD + H V ++F SG LV+ S+D +
Sbjct: 192 VDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGT 251
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+K+ D+ + + T+QGH V V+F + + S D + +W +
Sbjct: 252 VKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTS 300
Score = 113 (44.8 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 38/109 (34%), Positives = 54/109 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
L T S D T+K+ D+ G L++TL GH V V+F G+ S G D + VW T+
Sbjct: 243 LVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVWRTSFN 302
Query: 365 -------NKRNMKTL--EAHSHFVTSLDFHRAHPYVVTGSVDK--TVKV 402
+KRN+K L EA H LD + P+ G DK T+++
Sbjct: 303 QVHYRDPSKRNLKRLHLEASPHL---LDIYPRTPH---GHEDKRETIEI 345
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 246 (91.7 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+R+W H +V+ + F
Sbjct: 55 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ LV+ S D ++K+W + L ++ H + V F P+ ++SAS DKT+K+W+
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ C+ + H +V + P GT +A+ D+T +VW T + H V
Sbjct: 175 TSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNA 234
Query: 280 VAWAP 284
+++ P
Sbjct: 235 LSFHP 239
Score = 240 (89.5 bits), Expect = 4.8e-34, Sum P(2) = 4.8e-34
Identities = 57/178 (32%), Positives = 87/178 (48%)
Query: 88 SPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGH 147
+P++ P F GHR V V F +AS S D+T+ +W + GH
Sbjct: 3 APSQEDPSLERHF--KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGH 60
Query: 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
D+V + F SG LL S S D ++++W + + H V V F + +++
Sbjct: 61 KDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVT 120
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
AS DKT+K+W + +LT H WVR K SPDG L+ S S+D T ++W ++E
Sbjct: 121 ASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRE 178
Score = 229 (85.7 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 50/138 (36%), Positives = 67/138 (48%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXXY-----LATGSRDKTIKLWDVGSGSLLF 328
D TV W P V ES A L T S DKT+K+W LF
Sbjct: 82 DKTVRI--WVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLF 139
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ +VS DDKT+++WD ++ + + H FVT +DFH +
Sbjct: 140 SLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSG 199
Query: 389 PYVVTGSVDKTVKVWECR 406
+ +D TVKVW+ R
Sbjct: 200 TCIAAAGMDNTVKVWDAR 217
Score = 227 (85.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 52/193 (26%), Positives = 89/193 (46%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H + V V F + + S+D T+++W + +L H++
Sbjct: 88 WVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINW 147
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD ++ +C+ + H VT V F P+ + +A
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W+ T ++ H V + P G L + S+D T ++ L L
Sbjct: 208 DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 271 RGHDHTVECVAWA 283
GH VA++
Sbjct: 268 HGHQGPATTVAFS 280
Score = 208 (78.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 48/160 (30%), Positives = 82/160 (51%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+L+ H + V F P L+ S S+D T++LWD + E + H V + F S
Sbjct: 139 FSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPS 198
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + D ++K+WD T++ L+ Q H V ++F P+ +++++AS D T+K+ ++
Sbjct: 199 GTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDL 258
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 192 (72.6 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
Identities = 47/149 (31%), Positives = 65/149 (43%)
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG 195
E ER GH D+V + F + K L S S D +L +W M GH VT
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTC 66
Query: 196 VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
V F P+ + S SRDKT+++W H VR + DG L + S+D T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAP 284
+VWS + L H + V C ++P
Sbjct: 127 VKVWSTHRQRFLFSLTQHINWVRCAKFSP 155
Score = 186 (70.5 bits), Expect = 4.8e-34, Sum P(2) = 4.8e-34
Identities = 35/96 (36%), Positives = 54/96 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+KLWD S + + H +V V FHP G + + G D T++VWD
Sbjct: 160 IVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTH 219
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + HS V +L FH + Y++T S D T+K+
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKI 255
Score = 175 (66.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/100 (40%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+GSRDKT+++W +V S +F H VR V F G+ LV+ DDKT++VW T
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+R + +L H ++V F +V+ S DKTVK+W+
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 38/98 (38%), Positives = 50/98 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+GS D T+ +W + S + GH + V V F P G L S DKT+R+W
Sbjct: 33 HLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV 92
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
K AH+ V S+ F +VT S DKTVKVW
Sbjct: 93 KGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Score = 165 (63.1 bits), Expect = 7.6e-32, Sum P(2) = 7.6e-32
Identities = 33/98 (33%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A D T+K+WD + LL H V ++FHP G YL++ D TL++ D
Sbjct: 202 IAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T++ F R Y +G D+ V VW+
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 160 (61.4 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V FHP + +A+ D T+++WD T + H +V ++F SG L+
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ S+D +LK+ D+ + L T+ GH T VAF ++ S D+ + +W+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 116 (45.9 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
YL T S D T+K+ D+ G LL+TL GH V F G+Y S G D+ + VW
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 282 (104.3 bits), Expect = 7.8e-34, Sum P(2) = 7.8e-34
Identities = 55/181 (30%), Positives = 90/181 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH+ V + F P +L+AS S D T+RLW + H V+ + F G+LL
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLL 117
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
V+ S D S+K+W M + L ++ H H V F P+ ++S S DKTIK+W+
Sbjct: 118 VTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV + + + +P+GT +AS +DH ++W + + + H V C+++
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFH 237
Query: 284 P 284
P
Sbjct: 238 P 238
Score = 244 (91.0 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 51/165 (30%), Positives = 78/165 (47%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+ GH++ + F P +A+ S D + LW + GH D V + F G
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQG 72
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
LL S S D +++LW + + H V V F + +++AS DK+IK+W +
Sbjct: 73 NLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMF 132
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ +L H WVR K SPDG L+ SCS D T ++W K+
Sbjct: 133 RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 217 (81.4 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 52/193 (26%), Positives = 87/193 (45%)
Query: 92 WI-PRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+ R + H +PV V F L+ + SED +I++W + +L+ H
Sbjct: 87 WVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHW 146
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VSCS D ++K+WD + QC+ V F PN + SA
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGS 206
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D +K+W++ ++ H V + P G L + S+D T ++ L L
Sbjct: 207 DHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTL 266
Query: 271 RGHDHTVECVAWA 283
+GH V V+++
Sbjct: 267 QGHTGPVFTVSFS 279
Score = 205 (77.2 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 36/100 (36%), Positives = 56/100 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S DK+IK+W + L++L H +WVR F P G+ +VSC +DKT+++WDT NK
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ + F +DF+ + + D VK+W+ R
Sbjct: 177 QCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIR 216
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
++L H V F P L+ SCSED TI++WD + + + F+ +
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPN 197
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + S +D ++K+WD+ + L+ Q H V ++F P + +++AS D T+KM ++
Sbjct: 198 GTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDL 257
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH V + S DG LL S D +W
Sbjct: 258 IEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 199 (75.1 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 47/154 (30%), Positives = 71/154 (46%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
ER+ GH ++ F + K + + S D L LW + + GH VT + F P
Sbjct: 11 ERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSP 70
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + SASRD+T+++W + H VR + S DG LL + S D + +VWS
Sbjct: 71 QGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWS 130
Query: 261 LATKETKAELRGHDHTVECVAWAP-GVASESISE 293
+ + L H H V C ++P G S SE
Sbjct: 131 MFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Score = 162 (62.1 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ SRD+T++LW + H VR V F G+ LV+ +DK+++VW +
Sbjct: 75 LASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQ 134
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + +L H+H+V F +V+ S DKT+K+W+
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D + LW + + + +GH + V + F P G L S D+T+R+W K
Sbjct: 33 IATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRK 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+AH+ V S+DF +VT S DK++KVW
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVW 129
Score = 139 (54.0 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 30/92 (32%), Positives = 45/92 (48%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S DKTIK+WD + + + V F+P G + S G D +++WD + ++
Sbjct: 163 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQ 222
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ HS V L FH +VT S D TVK+
Sbjct: 223 HYQVHSCGVNCLSFHPLGNSLVTASSDGTVKM 254
Score = 131 (51.2 bits), Expect = 2.9e-28, Sum P(2) = 2.9e-28
Identities = 28/97 (28%), Positives = 48/97 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D +K+WD+ LL H V ++FHP G LV+ D T+++ D
Sbjct: 201 IASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL+ H+ V ++ F + + +G D V +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 110 (43.8 bits), Expect = 7.8e-34, Sum P(2) = 7.8e-34
Identities = 34/94 (36%), Positives = 46/94 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
L T S D T+K+ D+ G L++TL GH V V+F G+ L S G D + +W T
Sbjct: 243 LVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRTNFI 302
Query: 365 ------NKRNMKTL--EAHSHFVTSLDFHRAHPY 390
KRN+K L EA H LD + P+
Sbjct: 303 HLHCKDPKRNLKRLHFEASPHL---LDIYPRSPH 333
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 97/326 (29%), Positives = 162/326 (49%)
Query: 81 APTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEY 140
AP R + P + P + L+GH + + V F P +AS + DA I +W G
Sbjct: 17 APRR-EEEPQK--PNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNC 73
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
++ L+GH + D+A+ LVS S D +LK+WDM + +CLKT++GH V F P
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP 133
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
S+ ++S S D+++K+WEV TG C+KTL+ H + + + + +G+L+ S S D R+W
Sbjct: 134 PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Query: 261 LATKETKAELRGHDHT-VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW 319
A+ + L + V V ++P + I A L SR + +K +
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPN--GKYILTATLDNTLK-----LWDYSRGRCLKTY 246
Query: 320 DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV 379
G + + L + VT G K++VS +D + +W+ K ++ L+ H+ V
Sbjct: 247 -TGHKNEKYCLFASFS----VT---GRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVV 298
Query: 380 TSLDFHRAHPYVVTGSV--DKTVKVW 403
S H + + ++ DKT+KVW
Sbjct: 299 ISAACHPTKNIIASAALENDKTIKVW 324
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 75/268 (27%), Positives = 132/268 (49%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K L GH + V + S + S S+D T+++WD +G+ + L GH D V F+
Sbjct: 74 KKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP 133
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
L+VS S D S+K+W++ T +CLKT+ H ++ V F N ++S S D ++W+
Sbjct: 134 PSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Query: 219 VATGYCVKTLTGH-REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
A+G C++TL V +K SP+G + + + D+T ++W + GH +
Sbjct: 194 AASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEK 253
Query: 278 ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
C+ AS S++ ++ +GS D + +W++ + ++ L GH + V
Sbjct: 254 YCL-----FASFSVT----------GRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVV 298
Query: 338 RGVTFHPGGKYLVSCG--DDKTLRVWDT 363
HP + S +DKT++VW +
Sbjct: 299 ISAACHPTKNIIASAALENDKTIKVWSS 326
Score = 194 (73.4 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 39/101 (38%), Positives = 58/101 (57%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA+ + D I +W G+ TL GH + V + LVS DDKTL+VWD +
Sbjct: 53 WLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRS 112
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL+ HS FV DF+ +V+GS D++VK+WE +
Sbjct: 113 GKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
Score = 182 (69.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/98 (34%), Positives = 61/98 (62%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L + S DKT+K+WD+ SG L TL GH ++V F+P +VS D+++++W+
Sbjct: 96 LVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTG 155
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ +KTL AHS +++++F+ +V+GS D ++W+
Sbjct: 156 KCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWD 193
Score = 157 (60.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 31/99 (31%), Positives = 58/99 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +GS D+++K+W+V +G L TL H + + V F+ G +VS D R+WD A+
Sbjct: 138 IVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASG 197
Query: 367 RNMKTLEAHSHF-VTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ ++TL + V+ + F Y++T ++D T+K+W+
Sbjct: 198 QCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWD 236
Score = 124 (48.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384
+L TL GH + V F P G++L S D + +W + KTL HS ++ + +
Sbjct: 30 ALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAW 89
Query: 385 HRAHPYVVTGSVDKTVKVWECR 406
+V+ S DKT+KVW+ R
Sbjct: 90 SSDSSRLVSASDDKTLKVWDMR 111
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 367 (134.2 bits), Expect = 3.9e-33, P = 3.9e-33
Identities = 77/301 (25%), Positives = 143/301 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + F P +ASCS+D+ + +W+++ + GH +V + + G+ +
Sbjct: 45 GHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETI 104
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
SC D ++LW + ++ H + ++F + ++LS+S DKT+K+W +
Sbjct: 105 ASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRLQDKK 164
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+ + GH+ WVR +SPD L+AS S+D T +W L ++ ++ D V+ ++
Sbjct: 165 FMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVK-ISQI 223
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFH 343
+ + L + S D IK+ D+ S L+ HD V ++ H
Sbjct: 224 NSYSDHM--DTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIH 281
Query: 344 PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
P G +L S G D +++WD R + TL ++ +T++ F+++ Y TG VW
Sbjct: 282 PTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVW 341
Query: 404 E 404
+
Sbjct: 342 K 342
Score = 280 (103.6 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 76/292 (26%), Positives = 125/292 (42%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P KF GH+ V V + P +ASC +D IRLW + H +++ ++F
Sbjct: 82 PFKFV--GHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSF 139
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
G L+S S D +LKLW + + + + GH + V P+ V S S DKT+ +
Sbjct: 140 SADGGYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVML 199
Query: 217 WE-----VATGYC----------VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
W+ + + Y + + + H + V Q+ PDGT L S S DH ++ +
Sbjct: 200 WDLNFQKIVSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDI 259
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+ + HD V ++ P +LA+ D IK+WD+
Sbjct: 260 RSNKLIQHYNAHDAQVNSISIHP------------------TGYFLASAGSDSKIKIWDL 301
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
G ++TL +D + V F+ G Y + G VW T +N++ +E
Sbjct: 302 RQGRQIYTLYSNDKDITTVQFNQSGDYFATGGSQNLCMVWKTNFDQNIQNIE 353
Score = 250 (93.1 bits), Expect = 9.5e-19, P = 9.5e-19
Identities = 66/268 (24%), Positives = 112/268 (41%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
R+ GH D + FD + + SCS D + +W+ Q GH V V + P+
Sbjct: 41 RSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPD 100
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+ + S +D+ I++W+ + H +R + S DG L S S+D T ++W L
Sbjct: 101 GETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLLSSSDDKTLKLWRL 160
Query: 262 ATKETKAELRGHDHTVECVAWAPG---VASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
K+ GH + V +P VAS S + + D +K+
Sbjct: 161 QDKKFMCSFAGHKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKI 220
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
+ S S H + V V FHP G L+S D +++ D + + ++ AH
Sbjct: 221 SQINSYS------DHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQ 274
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVWECR 406
V S+ H ++ + D +K+W+ R
Sbjct: 275 VNSISIHPTGYFLASAGSDSKIKIWDLR 302
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 59/181 (32%), Positives = 104/181 (57%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + ++ + F+P +L+A+ S D T +LWD ++GE L GH + ++F+ SG +
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRI 234
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++ S D ++ +W+ T + + T+ GH ++ F + +L+ S DKT K+W+ G
Sbjct: 235 ITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGK 294
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV TLTGH + + G L+A+ S D TAR++S AT+E +L GH+ + +++
Sbjct: 295 CVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFN 354
Query: 284 P 284
P
Sbjct: 355 P 355
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 53/171 (30%), Positives = 96/171 (56%)
Query: 90 TEWIPRAPEK-FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHL 148
T W K + L GH + + +F+ SL+ + S D T +LWD G+ L GH
Sbjct: 244 TVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD 303
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
D + D FD +GKL+ + SAD + +++ +T +C+ ++GH+ ++ ++F P + +L+
Sbjct: 304 DEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTG 363
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
S DKT ++W+ TG C++ L GH + + + G ++ + S D+T R+W
Sbjct: 364 SSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 272 (100.8 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 59/190 (31%), Positives = 93/190 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W I E F L+GH + +I + F+ + + + S D T+ +W+ +TG L GH
Sbjct: 204 WDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAE 263
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ F+ L+++ S D + KLWD +C+ T+ GHD + F + +AS
Sbjct: 264 ISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASA 323
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T +++ AT CV L GH + +I +P G L + S+D TAR+W T + L
Sbjct: 324 DGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVL 383
Query: 271 RGH-DHTVEC 279
GH D C
Sbjct: 384 EGHTDEIFSC 393
Score = 253 (94.1 bits), Expect = 5.9e-33, Sum P(2) = 5.9e-33
Identities = 58/173 (33%), Positives = 84/173 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS-G 160
L H P+ V + S + S D T +LWD +GE L GH + V IAF+ G
Sbjct: 88 LRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S D + KLW + T +C T +GH + ++F P S V + S D T K+W++
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+G V TLTGH + + + G + + S DHT VW T L GH
Sbjct: 208 SGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGH 260
Score = 248 (92.4 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 54/181 (29%), Positives = 92/181 (50%)
Query: 98 EKFALSGHRSPVIKVIFH-PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
E L GHR+ V + F+ P +A+ S D T +LW ETG+ GH + ++F
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSF 185
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ L+ + S D + KLWD+ + + + T+ GH + ++F + + +++ S D T+ +
Sbjct: 186 NPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTV 245
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
WE TG V TL GH + + D +L+ + S D T ++W + A L GHD
Sbjct: 246 WEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE 305
Query: 277 V 277
+
Sbjct: 306 I 306
Score = 225 (84.3 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
Identities = 46/133 (34%), Positives = 75/133 (56%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL-P 200
+ L H+ + ++A ++SG ++ S D + KLWD ++ + L T++GH + V +AF P
Sbjct: 86 KVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
D + + S DKT K+W V TG C T GH + + +P TL+A+ S D TA++W
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 261 LATKETKAELRGH 273
+ + E L GH
Sbjct: 206 IQSGEEVFTLTGH 218
Score = 188 (71.2 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 37/98 (37%), Positives = 58/98 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D T KLWD+ SG +FTL GH + ++F+ G +++ D T+ VW+
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTG 251
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H ++S F+ ++TGS+DKT K+W+
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWD 289
Score = 179 (68.1 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
Identities = 46/160 (28%), Positives = 72/160 (45%)
Query: 254 HTARVWSLA--TKETKAELRGHDHTVECVAWAPGVASES---ISEAAXXXXXXXXX--XY 306
H+A + SL+ T + DHTV W + I A
Sbjct: 218 HSAEIISLSFNTSGNRIITGSFDHTV--TVWEADTGRKVYTLIGHCAEISSAVFNWDCSL 275
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS DKT KLWD +G + TL GHD+ + F GK + + D T R++ A +
Sbjct: 276 ILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ LE H ++ + F+ ++TGS DKT ++W+ +
Sbjct: 336 ECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Score = 178 (67.7 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 40/99 (40%), Positives = 56/99 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDTAN 365
+ATGS DKT KLW V +G T GH + ++F+P LV+ G D T ++WD +
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQS 208
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL HS + SL F+ + ++TGS D TV VWE
Sbjct: 209 GEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWE 247
Score = 177 (67.4 bits), Expect = 9.8e-11, P = 9.8e-11
Identities = 37/97 (38%), Positives = 51/97 (52%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFH-PGGKYLVSCGDDKTLRVWDTANKR 367
TGS D+T KLWD SG L TL GH N V + F+ P G + + DKT ++W +
Sbjct: 109 TGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK 168
Query: 368 NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
T H+ + L F+ V TGS+D T K+W+
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Score = 159 (61.0 bits), Expect = 5.9e-33, Sum P(2) = 5.9e-33
Identities = 29/97 (29%), Positives = 53/97 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D T +++ + + L GH+ + ++F+P G L++ DKT R+WD
Sbjct: 318 IATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTG 377
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ ++ LE H+ + S F+ ++TGS D T ++W
Sbjct: 378 QCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 152 (58.6 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 44/155 (28%), Positives = 73/155 (47%)
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ K ++ H +T VA + ++ S D+T K+W+ A+G + TL GHR V I
Sbjct: 82 FYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIA 141
Query: 240 VS-PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAA 295
+ P G +A+ S D T ++WS+ T + RGH + C+++ P VA+ S+ A
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTA 201
Query: 296 XX-XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT 329
+ TG + I L SG+ + T
Sbjct: 202 KLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIIT 236
Score = 119 (46.9 bits), Expect = 0.00030, P = 0.00030
Identities = 27/81 (33%), Positives = 45/81 (55%)
Query: 327 LFTLI-GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
LF ++ H + V + G ++ D+T ++WDTA+ + TLE H + V ++ F+
Sbjct: 84 LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 386 RAHPY---VVTGSVDKTVKVW 403
+PY + TGS DKT K+W
Sbjct: 144 --NPYGDKIATGSFDKTCKLW 162
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 59/181 (32%), Positives = 104/181 (57%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + ++ + F+P +L+A+ S D T +LWD + GE L GH + ++F+ SG +
Sbjct: 175 GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRI 234
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++ S D ++ +WD T + + + GH ++ +F + +L+ S DKT K+W+ G
Sbjct: 235 ITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGK 294
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV TLTGH + + G L+A+ S D TAR++S AT++ A+L GH+ + +++
Sbjct: 295 CVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFN 354
Query: 284 P 284
P
Sbjct: 355 P 355
Score = 275 (101.9 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 50/158 (31%), Positives = 91/158 (57%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + + F+ SL+ + S D T +LWD G+ L GH D + D FD +GK
Sbjct: 257 LIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGK 316
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L+ + SAD + +++ +T +C+ ++GH+ ++ ++F P + +L+ S DKT ++W+ T
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G C++ L GH + + + G ++ + S D+T R+W
Sbjct: 377 GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 272 (100.8 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 58/190 (30%), Positives = 93/190 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W I E + L GH + +I + F+ + + S D T+ +WD +TG L GH
Sbjct: 204 WDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAE 263
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ +F+ L+++ S D + KLWD + +C+ T+ GHD + F + +AS
Sbjct: 264 ISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASA 323
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T +++ AT C+ L GH + +I +P G L + S+D TAR+W T + L
Sbjct: 324 DGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVL 383
Query: 271 RGH-DHTVEC 279
GH D C
Sbjct: 384 EGHTDEIFSC 393
Score = 249 (92.7 bits), Expect = 6.6e-33, Sum P(2) = 6.6e-33
Identities = 54/188 (28%), Positives = 94/188 (50%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFH-PVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W + E+ L GHR+ V + F+ P +A+ S D T +LW ETG+ GH
Sbjct: 119 WDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTA 178
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+ ++F+ L+ + S D + KLWD+ + + T++GH + ++F + D +++ S
Sbjct: 179 EIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGS 238
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
D T+ +W+ TG V L GH + + D +L+ + S D T ++W + A
Sbjct: 239 FDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVAT 298
Query: 270 LRGHDHTV 277
L GHD +
Sbjct: 299 LTGHDDEI 306
Score = 243 (90.6 bits), Expect = 4.7e-32, Sum P(2) = 4.7e-32
Identities = 57/173 (32%), Positives = 82/173 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS-G 160
L H P+ V + S + S D T +LWD +GE L GH + V IAF+ G
Sbjct: 88 LKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYG 147
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S D + KLW + T +C T +GH + ++F P S V + S D T K+W++
Sbjct: 148 DKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
G V TL GH + + + G + + S DHT VW T L GH
Sbjct: 208 NGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGH 260
Score = 230 (86.0 bits), Expect = 6.7e-33, Sum P(2) = 6.7e-33
Identities = 47/133 (35%), Positives = 75/133 (56%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL-P 200
+ L H+ + ++A ++SG ++ S D + KLWD ++ + L T++GH + V +AF P
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
D + + S DKT K+W V TG C T GH + + +P TL+A+ S D TA++W
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 261 LATKETKAELRGH 273
+ E LRGH
Sbjct: 206 IQNGEEVYTLRGH 218
Score = 189 (71.6 bits), Expect = 6.7e-33, Sum P(2) = 6.7e-33
Identities = 47/160 (29%), Positives = 75/160 (46%)
Query: 254 HTARVWSLA--TKETKAELRGHDHTVECVAWAPGVASES---ISEAAXXXXXXXXX--XY 306
H+A + SL+ T + DHTV V W + I A
Sbjct: 218 HSAEIISLSFNTSGDRIITGSFDHTV--VVWDADTGRKVNILIGHCAEISSASFNWDCSL 275
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS DKT KLWD +G + TL GHD+ + F GK + + D T R++ A +
Sbjct: 276 ILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATR 335
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ + LE H ++ + F+ +++TGS DKT ++W+ +
Sbjct: 336 KCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQ 375
Score = 182 (69.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 40/99 (40%), Positives = 56/99 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDTAN 365
+ATGS DKT KLW V +G T GH + ++F+P LV+ G D T ++WD N
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQST-LVATGSMDTTAKLWDIQN 208
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL HS + SL F+ + ++TGS D TV VW+
Sbjct: 209 GEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWD 247
Score = 180 (68.4 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 35/98 (35%), Positives = 57/98 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D T KLWD+ +G ++TL GH + ++F+ G +++ D T+ VWD
Sbjct: 192 VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTG 251
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + L H ++S F+ ++TGS+DKT K+W+
Sbjct: 252 RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWD 289
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 37/97 (38%), Positives = 51/97 (52%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFH-PGGKYLVSCGDDKTLRVWDTANKR 367
TGS D+T KLWD SG L TL GH N V + F+ P G + + DKT ++W +
Sbjct: 109 TGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGK 168
Query: 368 NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
T H+ + L F+ V TGS+D T K+W+
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Score = 164 (62.8 bits), Expect = 6.6e-33, Sum P(2) = 6.6e-33
Identities = 30/97 (30%), Positives = 54/97 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D T +++ + + L GH+ + ++F+P G +L++ DKT R+WD
Sbjct: 318 IATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTG 377
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ ++ LE H+ + S F+ V+TGS D T ++W
Sbjct: 378 QCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 155 (59.6 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 34/107 (31%), Positives = 57/107 (53%)
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T+ K ++ H +T VA + ++ S D+T K+W+ A+G + TL GHR V I
Sbjct: 81 TFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAI 140
Query: 239 KVS-PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+ P G +A+ S D T ++WS+ T + RGH + C+++ P
Sbjct: 141 AFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNP 187
Score = 123 (48.4 bits), Expect = 0.00011, P = 0.00011
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXX 302
D +L SC D+T ++ + A+ + A + T +C+A G E IS+ +
Sbjct: 303 DDEILDSCF-DYTGKLIATASADGTARIFSAA-TRKCIAKLEGHEGE-ISKISFNPQGN- 358
Query: 303 XXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
+L TGS DKT ++WD +G L L GH + + F+ G +++ D T R+W
Sbjct: 359 ---HLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 307 LATGSRDKTIKLW------DVGSGS----LLFTLI-GHDNWVRGVTFHPGGKYLVSCGDD 355
L T SR + +KL +G S LF ++ H + V + G ++ D
Sbjct: 54 LLTASRTEQVKLLIQRLQEKLGQNSNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYD 113
Query: 356 KTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY---VVTGSVDKTVKVW 403
+T ++WDTA+ + TLE H + V ++ F+ +PY + TGS DKT K+W
Sbjct: 114 RTCKLWDTASGEELNTLEGHRNVVYAIAFN--NPYGDKIATGSFDKTCKLW 162
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 59/169 (34%), Positives = 97/169 (57%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W +P + LSGHR + V F+ SL+A+ S D + ++WD E G+ L GH D
Sbjct: 246 WDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE 305
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V D+ F+ +G+L+ + SAD + +++ T+QCL ++GH ++ V F VL+AS
Sbjct: 306 VLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASV 365
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
DKT ++W V TG C++ L GH + + + +G + + S D+T R+W
Sbjct: 366 DKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 280 (103.6 bits), Expect = 6.6e-24, P = 6.6e-24
Identities = 62/199 (31%), Positives = 108/199 (54%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ GH + ++ + F+P +L+A+ S D T +LWD E+GE L GH + + F+ +
Sbjct: 171 YTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTT 230
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G LV+ S D + LWD+ + + + + GH ++ V F + + +AS DK+ K+W+
Sbjct: 231 GDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDA 290
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G C+ TL GH + V + + G L+A+ S D T+RV+S T + +L GH +
Sbjct: 291 EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISK 350
Query: 280 VAW-APG--VASESISEAA 295
V + A G V + S+ + +
Sbjct: 351 VCFNAQGSRVLTASVDKTS 369
Score = 268 (99.4 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 71/234 (30%), Positives = 108/234 (46%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS- 159
AL H P+ V F+ S + S D T ++WD +GE L GH + V IAF+
Sbjct: 87 ALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPY 146
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + S D + KLW T +C T +GH + +AF P S V + S D T K+W+V
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDV 206
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+G V TL GH + + + G L + S DHTA +W + + L GH + C
Sbjct: 207 ESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISC 266
Query: 280 VA--WAPGVASESISEAAXXXXXXXXXXYLAT--GSRDKTIKLWDVGSGSLLFT 329
V W + + + + + LAT G D+ + + +G L+ T
Sbjct: 267 VQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIAT 320
Score = 248 (92.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 56/181 (30%), Positives = 94/181 (51%)
Query: 98 EKFALSGHRSPVIKVIFH-PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
E L GHR+ V + F+ P +A+ S D T +LW ETG+ GH + +AF
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAF 185
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ L+ + S D + KLWD+ + + + T+ GH + + F D +++ S D T +
Sbjct: 186 NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAIL 245
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
W+V +G V L+GHR + ++ + D +L+A+ S D + +VW + A L GH+
Sbjct: 246 WDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE 305
Query: 277 V 277
V
Sbjct: 306 V 306
Score = 247 (92.0 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 56/190 (29%), Positives = 89/190 (46%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W + E L+GH + +I + F+ + + S D T LWD +G L GH
Sbjct: 204 WDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGE 263
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ + F+ L+ + S D S K+WD QCL T+ GH+ V V F + +AS
Sbjct: 264 ISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASA 323
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T +++ T C+ L GH+ + ++ + G+ + + S D T+RVW + T L
Sbjct: 324 DGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVL 383
Query: 271 RGH-DHTVEC 279
GH D C
Sbjct: 384 EGHSDEIFSC 393
Score = 233 (87.1 bits), Expect = 8.8e-31, Sum P(2) = 8.8e-31
Identities = 48/133 (36%), Positives = 77/133 (57%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL-P 200
RAL H+ + ++AF++SG ++ S D + K+WD ++ + L T++GH + V +AF P
Sbjct: 86 RALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
D V + S DKT K+W TG C T GH + + +P TL+A+ S D TA++W
Sbjct: 146 YGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 261 LATKETKAELRGH 273
+ + E + L GH
Sbjct: 206 VESGEEVSTLAGH 218
Score = 172 (65.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 36/97 (37%), Positives = 51/97 (52%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFH-PGGKYLVSCGDDKTLRVWDTANKR 367
TGS D+T K+WD SG L TL GH N V + F+ P G + + DKT ++W +
Sbjct: 109 TGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGK 168
Query: 368 NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
T H+ + L F+ V TGS+D T K+W+
Sbjct: 169 CFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Score = 166 (63.5 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D T KLWDV SG + TL GH + + F+ G LV+ D T +WD +
Sbjct: 192 VATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSG 251
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + L H ++ + F+ + T S+DK+ KVW+
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWD 289
Score = 165 (63.1 bits), Expect = 8.8e-31, Sum P(2) = 8.8e-31
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S DK+ K+WD G L TL+GH++ V V F+ G+ + + D T RV+ T
Sbjct: 276 IATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTF 335
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + LE H ++ + F+ V+T SVDKT +VW
Sbjct: 336 QCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVW 372
Score = 163 (62.4 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
KLL+ C + D + + +Q H +T VAF + ++ S D+T K+W+ A
Sbjct: 64 KLLI-CKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTA 122
Query: 221 TGYCVKTLTGHREWVRQIKVS-PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+G + TL GHR V I + P G +A+ S D T ++WS T + RGH + C
Sbjct: 123 SGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVC 182
Query: 280 VAWAP 284
+A+ P
Sbjct: 183 LAFNP 187
Score = 159 (61.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/99 (36%), Positives = 52/99 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDTAN 365
+ATGS DKT KLW +G +T GH + + F+P LV+ G D T ++WD +
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQST-LVATGSMDTTAKLWDVES 208
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H + SL F+ +VTGS D T +W+
Sbjct: 209 GEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWD 247
Score = 134 (52.2 bits), Expect = 8.0e-33, Sum P(2) = 8.0e-33
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D T +++ + L L GH + V F+ G +++ DKT RVW
Sbjct: 318 IATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTG 377
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ LE HS + S F+ ++TGS D T ++W
Sbjct: 378 ACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 131 (51.2 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L TGS D T LWDV SG + L GH + V F+ + + DK+ +VWD
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGG 293
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + TL H+ V + F+ + T S D T +V+
Sbjct: 294 QCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVF 330
Score = 127 (49.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY---VVTGSV 396
V F+ G ++ D+T ++WDTA+ + TLE H + V ++ F+ +PY V TGS
Sbjct: 98 VAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFN--NPYGDKVATGSF 155
Query: 397 DKTVKVW 403
DKT K+W
Sbjct: 156 DKTCKLW 162
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 95/328 (28%), Positives = 162/328 (49%)
Query: 81 APTRAKRSPTEWIPRAPEKF--ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG 138
APT ++ S IP A K + GH + V F P + + S D T+++W+
Sbjct: 55 APTTSQEST---IPGAGYKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDL 111
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
ER L GH V D A+ K +V+ S D +LK++++ T + KT++GH + V F
Sbjct: 112 SCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNF 171
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P S V+S S D+++++W+V TG CVKTL H + V + + DG+L+ S S D R+
Sbjct: 172 NPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRI 231
Query: 259 WSLATKE-TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W A + K + + V V ++P + I + L + KT+K
Sbjct: 232 WDTANGQCVKTLVDDENPPVAFVKFSPN--GKYILSSNLDNTLK-----LWDFGKGKTLK 284
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ G + + + N+ VT GGK+++S +D + VW+ K +++LE H+
Sbjct: 285 QYQ-GHENNKYCIFA--NF--SVT---GGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQ 336
Query: 378 FVTSLDFHRAHPYVVTGSV--DKTVKVW 403
V + D H + +G++ D T+++W
Sbjct: 337 AVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 186 (70.5 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 35/101 (34%), Positives = 60/101 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+L T S DKT+K+W++ S TL GH V + K +V+ DDKTL++++
Sbjct: 93 FLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPT 152
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ KTL+ H+++V +F+ VV+GS D++V++W+ R
Sbjct: 153 VKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVR 193
Score = 177 (67.4 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 35/98 (35%), Positives = 59/98 (60%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ T S DKT+K+++V + + TL GH N+V F+P +VS D+++R+WD
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTG 195
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+KTL AHS V+++ F+R + +GS D V++W+
Sbjct: 196 MCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWD 233
Score = 160 (61.4 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 32/99 (32%), Positives = 60/99 (60%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +GS D+++++WDV +G + TL H + V V+F+ G + S D +R+WDTAN
Sbjct: 178 VVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANG 237
Query: 367 RNMKTL-EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ +KTL + + V + F Y+++ ++D T+K+W+
Sbjct: 238 QCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 133 (51.9 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 42/137 (30%), Positives = 67/137 (48%)
Query: 269 ELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG-SLL 327
E +G +++ E A AP S S+S A T S++ TI G+G L+
Sbjct: 20 EAQGVNNS-EAEAPAPAALS-SVSPANPPITAVPEAT-APTTSQESTIP----GAGYKLI 72
Query: 328 FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRA 387
T+ GH + V F P GK+L + DKT+++W+ ++ +TL H V +
Sbjct: 73 STIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSAD 132
Query: 388 HPYVVTGSVDKTVKVWE 404
+VT S DKT+K++E
Sbjct: 133 SKSIVTASDDKTLKIYE 149
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 256 (95.2 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 52/185 (28%), Positives = 91/185 (49%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+RLW H SV+ + F
Sbjct: 54 YRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSAD 113
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ L++ S D S+KLW + + + T++ H++ V F P+ ++S S D+T+K+W+
Sbjct: 114 GQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDA 173
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
++ + T + + P T +A+ S+D+T RVW + T + H V
Sbjct: 174 SSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNA 233
Query: 280 VAWAP 284
+++ P
Sbjct: 234 LSFHP 238
Score = 250 (93.1 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 53/162 (32%), Positives = 84/162 (51%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GHR + + F P +AS S DA++ +W+ + GH D+V + F S LL
Sbjct: 16 GHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLL 75
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D +++LW S + H +V V F + +L+AS D++IK+W V
Sbjct: 76 ASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQK 135
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ TL H WVR + SPDG L+ S S+D T ++W ++++
Sbjct: 136 IICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQ 177
Score = 223 (83.6 bits), Expect = 6.0e-29, Sum P(2) = 6.0e-29
Identities = 51/155 (32%), Positives = 81/155 (52%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
ER GH D++ + F SGK + S S D S+ +W+M GH VT V F P
Sbjct: 11 ERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSP 70
Query: 201 NSDFVLSASRDKTIKMWEVAT-GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
++ + S+SRDKT+++W + G V H VR + S DG L + S+D + ++W
Sbjct: 71 SAHLLASSSRDKTVRLWVPSVKGESV-LFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 260 SLATKETKAELRGHDHTVECVAWAP-GVASESISE 293
S+ ++ LR H++ V C ++P G S+S+
Sbjct: 130 SVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSD 164
Score = 219 (82.2 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 53/193 (27%), Positives = 88/193 (45%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H V V F + + S+D +I+LW + L H +
Sbjct: 87 WVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNW 146
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD S+ Q + T + V F P+S + +AS
Sbjct: 147 VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASS 206
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+++W++ T ++ H V + P G L + S+D T ++ L L
Sbjct: 207 DNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTL 266
Query: 271 RGHDHTVECVAWA 283
GH + CV+++
Sbjct: 267 HGHQGSASCVSFS 279
Score = 214 (80.4 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 47/138 (34%), Positives = 71/138 (51%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXX-----XXXXXYLATGSRDKTIKLWDVGSGSLLF 328
D TV W P V ES+ A L T S D++IKLW V ++
Sbjct: 81 DKTVRL--WVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
TL H+NWVR F P G+ +VS DD+T+++WD ++++ + T + + +DFH +
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSS 198
Query: 389 PYVVTGSVDKTVKVWECR 406
+ T S D TV+VW+ R
Sbjct: 199 TCIATASSDNTVRVWDIR 216
Score = 193 (73.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 48/160 (30%), Positives = 78/160 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL--HGHLDSVQDIAFDQS 159
L H + V F P LM S S+D T++LWD + + G S D F S
Sbjct: 140 LREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVD--FHPS 197
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
+ + S+D ++++WD+ T+ L+ Q H V ++F P+ + +L+AS D T+K+ ++
Sbjct: 198 STCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDL 257
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 258 LEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 160 (61.4 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 31/92 (33%), Positives = 48/92 (52%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S D+T+KLWD S L+ T + V FHP + + D T+RVWD ++
Sbjct: 163 SDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQ 222
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ HS V +L FH + +++T S D T+K+
Sbjct: 223 HYQVHSAAVNALSFHPSGNHLLTASSDSTLKI 254
Score = 157 (60.3 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 35/100 (35%), Positives = 58/100 (58%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+ SRDKT++LW V S+LF H VR V F G+ L++ DD+++++W
Sbjct: 75 LASSSRDKTVRLWVPSVKGESVLFR--AHTGSVRSVCFSADGQSLLTASDDQSIKLWSVH 132
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ + TL H+++V F +V+ S D+TVK+W+
Sbjct: 133 RQKIICTLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWD 172
Score = 154 (59.3 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D T+++WD+ + +LL H V ++FHP G +L++ D TL++ D
Sbjct: 201 IATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL H + + F R+ + D+ V VW
Sbjct: 261 RLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVW 297
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+GS D ++ +W++ S + GH + V V F P L S DKT+R+W + K
Sbjct: 33 IASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVK 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH+ V S+ F ++T S D+++K+W
Sbjct: 93 GESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Score = 109 (43.4 bits), Expect = 3.4e-28, Sum P(2) = 3.4e-28
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363
+L T S D T+K+ D+ G LL+TL GH V+F G S G D+ + VW T
Sbjct: 242 HLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVMVWRT 299
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 275 (101.9 bits), Expect = 3.9e-32, Sum P(2) = 3.9e-32
Identities = 56/182 (30%), Positives = 90/182 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLW-DYETGEYERALHGHLDSVQDIAFDQSGKL 162
GH+ V V F P +L+AS S D T+RLW + G++ H V+ + F G+
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQF 116
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + S D S+K+W M + L ++ H H V F P+ ++S S DKTIK+W+
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
CV + + + +P GT +AS +D T +VW + + + H V C+++
Sbjct: 177 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 236
Query: 283 AP 284
P
Sbjct: 237 HP 238
Score = 246 (91.7 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 52/168 (30%), Positives = 81/168 (48%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E++ GH++ + + P +A+ S D + LW+++ GH D V + F
Sbjct: 11 ERY-FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
G LL S S D +++LW + H V V F + F+ +AS DK+IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ + +L H WVR K SPDG L+ SCS D T ++W K+
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 244 (91.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 57/195 (29%), Positives = 91/195 (46%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
WIP KF+ H +PV V F +A+ SED +I++W + +L+ H
Sbjct: 87 WIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW 146
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VSCS D ++K+WD + QC+ V F P+ + SA
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 206
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D+T+K+W+V ++ H V I P L + S+D T ++ L L
Sbjct: 207 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTL 266
Query: 271 RGHDHTVECVAWAPG 285
+GH V V+++ G
Sbjct: 267 QGHTGPVFTVSFSKG 281
Score = 223 (83.6 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LAT S DK+IK+W + L++L H +WVR F P G+ +VSC +DKT+++WDT N
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K+ + F +DF+ + + + D+TVKVW+ R
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Score = 206 (77.6 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
++L H V F P L+ SCSED TI++WD + + + F+ S
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPS 197
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + S +D ++K+WD+ + L+ Q H V ++F P+ +++++AS D T+K+ ++
Sbjct: 198 GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDL 257
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH V + S G L AS D +W
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 204 (76.9 bits), Expect = 4.9e-26, Sum P(2) = 4.9e-26
Identities = 49/154 (31%), Positives = 71/154 (46%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
ER GH ++ + +GK L + S D L LW+ + GH VT V F P
Sbjct: 11 ERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP 70
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + + SASRD+T+++W H VR + S DG LA+ S D + +VWS
Sbjct: 71 HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWS 130
Query: 261 LATKETKAELRGHDHTVECVAWAP-GVASESISE 293
+ + L H H V C ++P G S SE
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Score = 162 (62.1 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ SRD+T++LW H VR V F G++L + +DK+++VW +
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ 134
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + +L H+H+V F +V+ S DKT+K+W+
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LAT S D + LW+ + + +GH + V V F P G L S D+T+R+W +
Sbjct: 33 LATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+AH+ V S+DF ++ T S DK++KVW
Sbjct: 93 GKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Score = 157 (60.3 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 31/92 (33%), Positives = 49/92 (53%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S DKTIK+WD + + + V F+P G + S G D+T++VWD + ++
Sbjct: 163 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 222
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ HS V + FH + Y+VT S D T+K+
Sbjct: 223 HYQVHSGGVNCISFHPSDNYLVTASSDGTLKI 254
Score = 151 (58.2 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D+T+K+WDV LL H V ++FHP YLV+ D TL++ D
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL+ H+ V ++ F + +G D V +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 119 (46.9 bits), Expect = 3.9e-32, Sum P(2) = 3.9e-32
Identities = 39/110 (35%), Positives = 53/110 (48%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-- 363
YL T S D T+K+ D+ G L++TL GH V V+F GG+ S G D + +W T
Sbjct: 242 YLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF 301
Query: 364 -------ANKRNMKTLEAHS--HFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
NKRN+K L S H LD + P+ V+ TV+ E
Sbjct: 302 DELHCKGLNKRNLKRLHFDSPPHL---LDIYPRTPHPHEEKVE-TVETTE 347
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 59/181 (32%), Positives = 105/181 (58%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + ++ + F+P +++A+ S D T +LWD ++GE L GHL + ++FD SG +
Sbjct: 175 GHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI 234
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++ S D ++ +WD ST + + T+ GH ++ F + +L+ S DKT +W+ +G
Sbjct: 235 ITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGK 294
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV TLTGH + + G L+A+ S D TARV++ T++ +L GH+ + +++
Sbjct: 295 CVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFN 354
Query: 284 P 284
P
Sbjct: 355 P 355
Score = 274 (101.5 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 50/158 (31%), Positives = 93/158 (58%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + + +F SL+ + S D T LWD +G+ L GH D + D FD +GK
Sbjct: 257 LIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGK 316
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L+ + SAD + ++++ +T +C+ ++GH+ ++ ++F P + +L+ S DKT ++W+V T
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G C++ L GH + + + G ++ + S D++ R+W
Sbjct: 377 GQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 257 (95.5 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 56/190 (29%), Positives = 89/190 (46%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W I E L+GH + +I + F + + S D T+ +WD TG L GH
Sbjct: 204 WDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAE 263
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ F L+++ S D + LWD ++ +C+ T+ GHD + F + +AS
Sbjct: 264 ISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASA 323
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T +++ T C+ L GH + +I +P G L + S+D TAR+W + T + L
Sbjct: 324 DGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVL 383
Query: 271 RGH-DHTVEC 279
GH D C
Sbjct: 384 EGHTDEIFSC 393
Score = 248 (92.4 bits), Expect = 7.9e-32, Sum P(2) = 7.9e-32
Identities = 57/173 (32%), Positives = 83/173 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS-G 160
L H P+ V + S + S D T ++WD +GE L GH + V IAF+ G
Sbjct: 88 LRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S D + KLW T +C T +GH + ++F P S V + S D T K+W++
Sbjct: 148 DKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQ 207
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+G V TLTGH + + G + + S DHT VW +T L GH
Sbjct: 208 SGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGH 260
Score = 246 (91.7 bits), Expect = 1.6e-31, Sum P(2) = 1.6e-31
Identities = 54/181 (29%), Positives = 93/181 (51%)
Query: 98 EKFALSGHRSPVIKVIFH-PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
E L GHR+ V + F+ P +A+ S D T +LW ETG+ GH + ++F
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSF 185
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ ++ + S D + KLWD+ + + + T+ GH + ++F + D +++ S D T+ +
Sbjct: 186 NPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVV 245
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
W+ +TG V TL GH + S D +L+ + S D T +W + + A L GHD
Sbjct: 246 WDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDE 305
Query: 277 V 277
+
Sbjct: 306 I 306
Score = 214 (80.4 bits), Expect = 8.5e-30, Sum P(2) = 8.5e-30
Identities = 42/133 (31%), Positives = 74/133 (55%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL-P 200
+ L H+ + ++A +++G ++ S D + K+WD ++ + L T++GH + V +AF P
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNP 145
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
D + + S DKT K+W TG C T GH + + +P T++A+ S D TA++W
Sbjct: 146 YGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Query: 261 LATKETKAELRGH 273
+ + E L GH
Sbjct: 206 IQSGEEVVTLTGH 218
Score = 179 (68.1 bits), Expect = 8.5e-30, Sum P(2) = 8.5e-30
Identities = 47/158 (29%), Positives = 71/158 (44%)
Query: 254 HTARVWSLA--TKETKAELRGHDHTVECVAWAPGVASES---ISEAAXXXXXXXXX--XY 306
H A + SL+ T + DHTV V W + I A
Sbjct: 218 HLAEIISLSFDTSGDRIITGSFDHTV--VVWDASTGRKVHTLIGHCAEISSALFSWDCSL 275
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS DKT LWD SG + TL GHD+ + F GK + + D T RV++ +
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTR 335
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ + LE H ++ + F+ ++TGS DKT ++W+
Sbjct: 336 KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWD 373
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 57/197 (28%), Positives = 84/197 (42%)
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
+ K+I + E++ V TL G + KV P L + S R L + + +
Sbjct: 26 KTKSIDLLELSPSTDVNTLVGEIQ-----KVEP----LITASRTKQVR---LLVQRLQEK 73
Query: 270 LRGH-DHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLF 328
LR H DH V I ++ TGS D+T K+WD SG L
Sbjct: 74 LRQHCDHNFYLFK----VLRAHILPLTNVALNKAGSCFI-TGSYDRTCKVWDTASGEELH 128
Query: 329 TLIGHDNWVRGVTFH-PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRA 387
TL GH N V + F+ P G + + DKT ++W + T H+ + L F+
Sbjct: 129 TLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQ 188
Query: 388 HPYVVTGSVDKTVKVWE 404
V TGS+D T K+W+
Sbjct: 189 STVVATGSMDTTAKLWD 205
Score = 171 (65.3 bits), Expect = 8.7e-21, Sum P(2) = 8.7e-21
Identities = 36/98 (36%), Positives = 55/98 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D T KLWD+ SG + TL GH + ++F G +++ D T+ VWD +
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG 251
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H ++S F ++TGS+DKT +W+
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWD 289
Score = 163 (62.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 34/98 (34%), Positives = 51/98 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS DKT KLW +G T GH + ++F+P + + D T ++WD +
Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG 209
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H + SL F + ++TGS D TV VW+
Sbjct: 210 EEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWD 247
Score = 155 (59.6 bits), Expect = 7.9e-32, Sum P(2) = 7.9e-32
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D T ++++ + + L GH+ + ++F+P G L++ DKT R+WD
Sbjct: 318 IATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTG 377
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ ++ LE H+ + S F+ V+TGS D + ++W
Sbjct: 378 QCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 143 (55.4 bits), Expect = 8.7e-21, Sum P(2) = 8.7e-21
Identities = 33/106 (31%), Positives = 54/106 (50%)
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ K ++ H +T VA ++ S D+T K+W+ A+G + TL GHR V I
Sbjct: 82 FYLFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIA 141
Query: 240 VS-PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+ P G +A+ S D T ++WS T + RGH + C+++ P
Sbjct: 142 FNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNP 187
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 275 (101.9 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 56/182 (30%), Positives = 90/182 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLW-DYETGEYERALHGHLDSVQDIAFDQSGKL 162
GH+ V V F P +L+AS S D T+RLW + G++ H V+ + F G+
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQF 74
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + S D S+K+W M + L ++ H H V F P+ ++S S DKTIK+W+
Sbjct: 75 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 134
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
CV + + + +P GT +AS +D T +VW + + + H V C+++
Sbjct: 135 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 194
Query: 283 AP 284
P
Sbjct: 195 HP 196
Score = 250 (93.1 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 58/195 (29%), Positives = 92/195 (47%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
WIP KF+ H +PV V F +A+ SED +I++W + +L+ H
Sbjct: 45 WIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW 104
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VSCS D ++K+WD + QC+ V F P+ + SA
Sbjct: 105 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 164
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D+T+K+W+V ++ H V I P G L + S+D T ++ L L
Sbjct: 165 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL 224
Query: 271 RGHDHTVECVAWAPG 285
+GH V V+++ G
Sbjct: 225 QGHTGPVFTVSFSKG 239
Score = 223 (83.6 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LAT S DK+IK+W + L++L H +WVR F P G+ +VSC +DKT+++WDT N
Sbjct: 74 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 133
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K+ + F +DF+ + + + D+TVKVW+ R
Sbjct: 134 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 174
Score = 218 (81.8 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
Identities = 45/134 (33%), Positives = 65/134 (48%)
Query: 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
LW+++ GH D V + F G LL S S D +++LW + H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V V F + F+ +AS DK+IK+W + + +L H WVR K SPDG L+ SCS
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 252 NDHTARVWSLATKE 265
D T ++W K+
Sbjct: 122 EDKTIKIWDTTNKQ 135
Score = 207 (77.9 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
++L H V F P L+ SCSED TI++WD + + + F+ S
Sbjct: 96 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPS 155
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + S +D ++K+WD+ + L+ Q H V ++F P+ +++++AS D T+K+ ++
Sbjct: 156 GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 215
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH V + S G L AS D +W
Sbjct: 216 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 163 (62.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 39/121 (32%), Positives = 56/121 (46%)
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
LW+ + GH VT V F P+ + + SASRD+T+++W H
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESIS 292
VR + S DG LA+ S D + +VWS+ + L H H V C ++P G S S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 293 E 293
E
Sbjct: 122 E 122
Score = 162 (62.1 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ SRD+T++LW H VR V F G++L + +DK+++VW +
Sbjct: 33 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + +L H+H+V F +V+ S DKT+K+W+
Sbjct: 93 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 130
Score = 157 (60.3 bits), Expect = 7.4e-28, Sum P(2) = 7.4e-28
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D+T+K+WDV LL H V ++FHP G YL++ D TL++ D
Sbjct: 159 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG 218
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL+ H+ V ++ F + +G D V +W
Sbjct: 219 RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 155 (59.6 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S DKTIK+WD + + + V F+P G + S G D+T++VWD + ++
Sbjct: 121 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 180
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ HS V + FH + Y++T S D T+K+
Sbjct: 181 HYQVHSGGVNCISFHPSGNYLITASSDGTLKI 212
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
LW+ + + +GH + V V F P G L S D+T+R+W + +AH+
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 378 FVTSLDFHRAHPYVVTGSVDKTVKVW 403
V S+DF ++ T S DK++KVW
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVW 87
Score = 112 (44.5 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 37/108 (34%), Positives = 52/108 (48%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-- 363
YL T S D T+K+ D+ G L++TL GH V V+F GG+ S G D + +W T
Sbjct: 200 YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF 259
Query: 364 -------ANKRNMKTLEAHS--HFVTSLDFHRAHPYVVTGSVDKTVKV 402
KRN+K L S H LD + P+ V+ TV++
Sbjct: 260 DELHCKGLTKRNLKRLHFDSPPHL---LDIYPRTPHPHEEKVE-TVEI 303
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 348 (127.6 bits), Expect = 1.5e-31, P = 1.5e-31
Identities = 104/351 (29%), Positives = 159/351 (45%)
Query: 79 EGAP-TRAKRSPTEWIPRAP---------EKFALSGHRSPVIKVIFHPVFSLMASCSEDA 128
E P T RSPT P P +KF L GH V V F P S++AS D
Sbjct: 139 ENEPETDPDRSPTPVPPPPPPKPESVNYRQKFLLRGHLRGVSAVRFSPDASMIASGGADG 198
Query: 129 TIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKT-MQ 187
+++W TG+ GHL + I++ G + S S D +++LW++ T + T
Sbjct: 199 AVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFI 258
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247
GH + V +AF P + ++S S D+ + +W+V + +K+L H + V I V DGTL+
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLI 318
Query: 248 ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYL 307
ASC+ D R+W +T + L D+ P V+S S Y+
Sbjct: 319 ASCATDGLVRIWDTSTGQCLRTLVHEDN--------PPVSSVKFSPNGK---------YV 361
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDN---------WVRGVTFH---PGGKYLVSCGDD 355
+ D ++LWD G L T GH N V G + PG + VS +D
Sbjct: 362 LAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSED 421
Query: 356 KTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP--YVVTGSVDKTVKVWE 404
+ WD K+ ++ +EAH V +D ++V+ +D TV+VWE
Sbjct: 422 GAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 209 (78.6 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 59/197 (29%), Positives = 92/197 (46%)
Query: 101 ALSGHRSPV--IKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL-HGHLDSVQDIAFD 157
+L H PV I V++ +L+ASC+ D +R+WD TG+ R L H V + F
Sbjct: 298 SLPAHSDPVSGIDVVWDG--TLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFS 355
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHD---HNVTGVAF----------LPNSDF 204
+GK +++ + D ++LWD +CLKT QGH ++++G AF P F
Sbjct: 356 PNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSG-AFGVYGQSIPGRTPGYAF 414
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV--SPDGTLLASCSNDHTARVWSLA 262
+S S D I W+V T ++ + H V + + +G + SC D T RVW
Sbjct: 415 AVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWEEV 474
Query: 263 TKETKAELRGHDHTVEC 279
E + E +C
Sbjct: 475 GPEREPEPEPEPEPGQC 491
Score = 157 (60.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 30/101 (29%), Positives = 55/101 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-AN 365
+A+G D +K+W +G L++T GH + +++ P G + S DDKT+R+W+
Sbjct: 191 IASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTG 250
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K + H ++V ++ F +V+GS D+ V +W+ R
Sbjct: 251 KAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVR 291
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 287 (106.1 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 61/170 (35%), Positives = 94/170 (55%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH V+ + F+ + L+ + S D+TI +WD TG+ R L GH D V+ + FD + L
Sbjct: 300 GHMDGVLTLQFN--YRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD--RKL 355
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++ S D ++++W+ T +C+ T +GH +V V ++S S DKT+K+W V +
Sbjct: 356 ITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQK--VIVSGSADKTVKVWHVESRT 413
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
C TL GH EWV +K+ P SCS+D T R+W + T RGH
Sbjct: 414 CY-TLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGH 462
Score = 254 (94.5 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 80/251 (31%), Positives = 122/251 (48%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184
S D TIR+W+Y TGE GH DSV ++ D K++VS SAD ++K+W + + C
Sbjct: 359 SLDKTIRVWNYITGECISTYRGHSDSV--LSVDSYQKVIVSGSADKTVKVWHVESRTCY- 415
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI-KVSPD 243
T++GH V V P S S S D TI+MW++ T C+K GH V Q+ K+ P
Sbjct: 416 TLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGH---VGQVQKIIPL 472
Query: 244 GTL--LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXX 301
T+ + + + D+T+ S T + G D + P E++ +
Sbjct: 473 -TIKDVENLATDNTSDGSSPQDDPTMTD--GADESD-----TPSNEQETVLDE-----NI 519
Query: 302 XXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY-LVSCGDDKTLRV 360
+L + D TIKLWDV +G + T GH V GV + ++S D +++V
Sbjct: 520 PYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGH---VEGVWDIAADNFRIISGSHDGSIKV 576
Query: 361 WDTANKRNMKT 371
WD + + M T
Sbjct: 577 WDLQSGKCMHT 587
Score = 181 (68.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 59/186 (31%), Positives = 85/186 (45%)
Query: 85 AKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL 144
A ++ W + + L GH V V HP SCS+D TIR+WD T +
Sbjct: 400 ADKTVKVWHVESRTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVF 459
Query: 145 HGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM-QGHDHNVTGV------- 196
GH+ VQ I + K + + + D + D S+ Q TM G D + T
Sbjct: 460 RGHVGQVQKI-IPLTIKDVENLATDNTS---DGSSPQDDPTMTDGADESDTPSNEQETVL 515
Query: 197 -AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
+P +LS D TIK+W+V TG C++T GH E V I + D + S S+D +
Sbjct: 516 DENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDI--AADNFRIISGSHDGS 573
Query: 256 ARVWSL 261
+VW L
Sbjct: 574 IKVWDL 579
Score = 171 (65.3 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 39/97 (40%), Positives = 57/97 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L TGS D TI +WD+ +G L+ L GH + V+ + F + L++ DKT+RVW+
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD--RKLITGSLDKTIRVWNYITG 372
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ T HS V S+D ++ +V+GS DKTVKVW
Sbjct: 373 ECISTYRGHSDSVLSVDSYQK--VIVSGSADKTVKVW 407
Score = 148 (57.2 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +GS DKT+K+W V S + +TL GH WV V HP SC DD T+R+WD
Sbjct: 395 IVSGSADKTVKVWHVESRTC-YTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTN 453
Query: 367 RNMKTLEAH 375
+K H
Sbjct: 454 SCLKVFRGH 462
Score = 145 (56.1 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDF-VLSASRDKTIKMWEVAT 221
L+SC D ++KLWD+ T +C++T GH V GV + +F ++S S D +IK+W++ +
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQFGH---VEGVWDIAADNFRIISGSHDGSIKVWDLQS 581
Query: 222 GYCVKTLTGHR 232
G C+ T G R
Sbjct: 582 GKCMHTFNGRR 592
Score = 143 (55.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 34/100 (34%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L TGS DKTI++W+ +G + T GH + V V + K +VS DKT++VW +
Sbjct: 355 LITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQ--KVIVSGSADKTVKVWHVES- 411
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R TL H+ +V + H + S D T+++W+ R
Sbjct: 412 RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIR 451
Score = 122 (48.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
++ +GH V + F N + + S D TI +W++ TG ++ L+GH + V+ +
Sbjct: 295 IQEFKGHMDGVLTLQF--NYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF-- 350
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
D L + S D T RVW+ T E + RGH +V
Sbjct: 351 DDRKLITGSLDKTIRVWNYITGECISTYRGHSDSV 385
Score = 89 (36.4 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 344 PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
P +L+SCG D T+++WD + ++T H V D + +++GS D ++KVW
Sbjct: 520 PYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVW--DIAADNFRIISGSHDGSIKVW 577
Query: 404 E 404
+
Sbjct: 578 D 578
Score = 63 (27.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 21/75 (28%), Positives = 33/75 (44%)
Query: 205 VLSASRDKTIKMWEVATGYC-VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
V+ R K W G+C ++ GH + V ++ + LL + S D T +W L T
Sbjct: 276 VIYRERFKVESNWR--KGHCRIQEFKGHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFT 331
Query: 264 KETKAELRGHDHTVE 278
+ L GH V+
Sbjct: 332 GKLIRRLSGHSDGVK 346
Score = 61 (26.5 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIG 332
+ +GS D +IK+WD+ SG + T G
Sbjct: 565 IISGSHDGSIKVWDLQSGKCMHTFNG 590
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 275 (101.9 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 56/182 (30%), Positives = 90/182 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLW-DYETGEYERALHGHLDSVQDIAFDQSGKL 162
GH+ V V F P +L+AS S D T+RLW + G++ H V+ + F G+
Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSE-FKAHTAPVRSVDFSADGQF 116
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + S D S+K+W M + L ++ H H V F P+ ++S S DKTIK+W+
Sbjct: 117 LATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
CV + + + +P GT +AS +D T +VW + + + H V C+++
Sbjct: 177 QCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 236
Query: 283 AP 284
P
Sbjct: 237 HP 238
Score = 250 (93.1 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 58/195 (29%), Positives = 92/195 (47%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
WIP KF+ H +PV V F +A+ SED +I++W + +L+ H
Sbjct: 87 WIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW 146
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VSCS D ++K+WD + QC+ V F P+ + SA
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGS 206
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D+T+K+W+V ++ H V I P G L + S+D T ++ L L
Sbjct: 207 DQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTL 266
Query: 271 RGHDHTVECVAWAPG 285
+GH V V+++ G
Sbjct: 267 QGHTGPVFTVSFSKG 281
Score = 246 (91.7 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 52/168 (30%), Positives = 81/168 (48%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E++ GH++ + + P +A+ S D + LW+++ GH D V + F
Sbjct: 11 ERY-FKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
G LL S S D +++LW + H V V F + F+ +AS DK+IK+W
Sbjct: 70 PHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ + +L H WVR K SPDG L+ SCS D T ++W K+
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 223 (83.6 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 39/101 (38%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LAT S DK+IK+W + L++L H +WVR F P G+ +VSC +DKT+++WDT N
Sbjct: 116 FLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN 175
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K+ + F +DF+ + + + D+TVKVW+ R
Sbjct: 176 KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216
Score = 207 (77.9 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 47/160 (29%), Positives = 79/160 (49%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
++L H V F P L+ SCSED TI++WD + + + F+ S
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPS 197
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + S +D ++K+WD+ + L+ Q H V ++F P+ +++++AS D T+K+ ++
Sbjct: 198 GTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDL 257
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH V + S G L AS D +W
Sbjct: 258 LEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 204 (76.9 bits), Expect = 6.5e-26, Sum P(2) = 6.5e-26
Identities = 49/154 (31%), Positives = 71/154 (46%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
ER GH ++ + +GK L + S D L LW+ + GH VT V F P
Sbjct: 11 ERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP 70
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + + SASRD+T+++W H VR + S DG LA+ S D + +VWS
Sbjct: 71 HGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWS 130
Query: 261 LATKETKAELRGHDHTVECVAWAP-GVASESISE 293
+ + L H H V C ++P G S SE
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Score = 162 (62.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 32/98 (32%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ SRD+T++LW H VR V F G++L + +DK+++VW +
Sbjct: 75 LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQ 134
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + +L H+H+V F +V+ S DKT+K+W+
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LAT S D + LW+ + + +GH + V V F P G L S D+T+R+W +
Sbjct: 33 LATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKR 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+AH+ V S+DF ++ T S DK++KVW
Sbjct: 93 GKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Score = 157 (60.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D+T+K+WDV LL H V ++FHP G YL++ D TL++ D
Sbjct: 201 IASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL+ H+ V ++ F + +G D V +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 155 (59.6 bits), Expect = 4.9e-31, Sum P(2) = 4.9e-31
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
S DKTIK+WD + + + V F+P G + S G D+T++VWD + ++
Sbjct: 163 SEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQ 222
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ HS V + FH + Y++T S D T+K+
Sbjct: 223 HYQVHSGGVNCISFHPSGNYLITASSDGTLKI 254
Score = 112 (44.5 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 37/108 (34%), Positives = 52/108 (48%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-- 363
YL T S D T+K+ D+ G L++TL GH V V+F GG+ S G D + +W T
Sbjct: 242 YLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLWRTNF 301
Query: 364 -------ANKRNMKTLEAHS--HFVTSLDFHRAHPYVVTGSVDKTVKV 402
KRN+K L S H LD + P+ V+ TV++
Sbjct: 302 DELHCKGLTKRNLKRLHFDSPPHL---LDIYPRTPHPHEEKVE-TVEI 345
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 245 (91.3 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+R+W H +V+ + F
Sbjct: 86 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSD 145
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ V+ S D ++K+W + L ++ H + V F P+ ++SAS DKT+K+W+
Sbjct: 146 GQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 205
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ CV + H +V + P GT +A+ D+T +VW + T + H V
Sbjct: 206 TSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 265
Query: 280 VAWAP 284
+++ P
Sbjct: 266 LSFHP 270
Score = 232 (86.7 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 55/193 (28%), Positives = 90/193 (46%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H + V V F + S+D TI++W ++ +L H++
Sbjct: 119 WVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINW 178
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD ++ +C+ + H VT V F P+ V +A
Sbjct: 179 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGM 238
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W+V T ++ H V + P G L + S+D T ++ L L
Sbjct: 239 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 298
Query: 271 RGHDHTVECVAWA 283
GH VA++
Sbjct: 299 HGHQGPATTVAFS 311
Score = 228 (85.3 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 62/205 (30%), Positives = 91/205 (44%)
Query: 82 PTRAKRSPTEWIPRAPEKFA--LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE 139
P RA T +P+ GHR V V F +AS S D+ + +W +
Sbjct: 24 PYRAFTHLTMALPQEDPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQS 83
Query: 140 YERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL 199
GH D+V + F SG LL S S D ++++W + + H V V F
Sbjct: 84 RAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFC 143
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+ ++AS DKTIK+W + +L+ H WVR K SPDG L+ S S+D T ++W
Sbjct: 144 SDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 203
Query: 260 SLATKETKAELRGHDHTVECVAWAP 284
++E H V V + P
Sbjct: 204 DKTSRECVHSYCEHGGFVTYVDFHP 228
Score = 225 (84.3 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 50/138 (36%), Positives = 66/138 (47%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXXY-----LATGSRDKTIKLWDVGSGSLLF 328
D TV W P + ES A T S DKTIK+W LF
Sbjct: 113 DKTVRI--WVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLF 170
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ +VS DDKT+++WD ++ + + H FVT +DFH +
Sbjct: 171 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 230
Query: 389 PYVVTGSVDKTVKVWECR 406
V +D TVKVW+ R
Sbjct: 231 TCVAAAGMDNTVKVWDVR 248
Score = 212 (79.7 bits), Expect = 5.7e-15, P = 5.7e-15
Identities = 49/160 (30%), Positives = 83/160 (51%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+LS H + V F P L+ S S+D T++LWD + E + H V + F S
Sbjct: 170 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 229
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + D ++K+WD+ T++ L+ Q H V ++F P+ +++++AS D T+K+ ++
Sbjct: 230 GTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 289
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 290 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 185 (70.2 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 36/96 (37%), Positives = 54/96 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+KLWD S + + H +V V FHP G + + G D T++VWD
Sbjct: 191 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTH 250
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + HS V +L FH + Y+VT S D T+K+
Sbjct: 251 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 286
Score = 169 (64.5 bits), Expect = 4.4e-31, Sum P(2) = 4.4e-31
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A D T+K+WDV + LL H V ++FHP G YLV+ D TL++ D
Sbjct: 233 VAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 292
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T++ F R Y +G D+ V VW+
Sbjct: 293 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 169 (64.5 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/100 (37%), Positives = 58/100 (58%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+GSRDKT+++W ++ S +F H VR V F G+ V+ DDKT++VW T
Sbjct: 107 LASGSRDKTVRIWVPNIKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH 164
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ + +L H ++V F +V+ S DKTVK+W+
Sbjct: 165 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 204
Score = 162 (62.1 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V FHP + +A+ D T+++WD T + H +V ++F SG LV
Sbjct: 217 HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ S+D +LK+ D+ + L T+ GH T VAF ++ S D+ + +W+
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 154 (59.3 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 36/97 (37%), Positives = 47/97 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS D + +W + S + GH + V V F P G L S DKT+R+W K
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIK 124
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH+ V S+ F VT S DKT+KVW
Sbjct: 125 GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW 161
Score = 117 (46.2 bits), Expect = 3.5e-28, Sum P(2) = 3.5e-28
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
YL T S D T+K+ D+ G LL+TL GH V F G+Y S G D+ + VW
Sbjct: 274 YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 91/295 (30%), Positives = 138/295 (46%)
Query: 91 EWIP---RAPEKFALS-----G-HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE 141
EW P RAP + A+ G H V F P + + S+D + +W ++G
Sbjct: 2 EWAPMNIRAPTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLL 61
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
L GH V+ F G+L+ S S+D S++LWD++ +CL ++GH +V V+F P+
Sbjct: 62 WRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPD 121
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
S + S DK +WEV +G V L GH + ++ SP LA+ S D T +W L
Sbjct: 122 SKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDL 181
Query: 262 ATKETKAE---LRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
L GH + C+ ++ AS LA+GS DKTI +
Sbjct: 182 RASTPVVSYHNLEGHTGNISCLCYS---AS----------------GLLASGSWDKTICV 222
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
W + +L L GH WV + F P L S G +T++VWD + ++TL+
Sbjct: 223 WKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLK 277
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 77/264 (29%), Positives = 125/264 (47%)
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
H V AF G+ L++ S D + +W + + L + GH V F P+ +
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 207 SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET 266
S+S D +I++W+VA C+ L GH+ V + SPD LAS D A VW + +
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 267 KAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL 326
L GH +++ ++P S+S LATGS D T+ +WD+ + +
Sbjct: 145 VHLLVGHCDSIQSSDFSP--TSDS----------------LATGSWDSTVHIWDLRASTP 186
Query: 327 LFT---LIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWD-TANKRNMKTLEAHSHFVTS 381
+ + L GH + + + G L++ G DKT+ VW T N ++ L+ H+ +V S
Sbjct: 187 VVSYHNLEGHTGNISCLCYSASG--LLASGSWDKTICVWKPTTNNLPLQ-LKGHTIWVNS 243
Query: 382 LDFHRAHPYVVTGSVDKTVKVWEC 405
L F + + +TVKVW+C
Sbjct: 244 LAFSPDELKLASAGYSRTVKVWDC 267
Score = 219 (82.2 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 57/185 (30%), Positives = 85/185 (45%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W + R+ L GH+ V V F P +AS D +W+ ++G L GH DS
Sbjct: 95 WDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDS 154
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDM--ST-YQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+Q F + L + S D ++ +WD+ ST ++GH N++ + + S + S
Sbjct: 155 IQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA-SGLLAS 213
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
S DKTI +W+ T L GH WV + SPD LAS T +VW T +
Sbjct: 214 GSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCL 273
Query: 268 AELRG 272
L+G
Sbjct: 274 ETLKG 278
Score = 200 (75.5 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 73/255 (28%), Positives = 108/255 (42%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L+GHR PV F P L+AS S D +IRLWD + L GH SV+ ++F K
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK 123
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S D +W++ + + + + GH ++ F P SD + + S D T+ +W++
Sbjct: 124 QLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRA 183
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT---KET--KAELRGHDHT 276
V ++ H +S L S S + W K T L+ HT
Sbjct: 184 STPV--VSYHNLEGHTGNIS---CLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHT 238
Query: 277 VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336
+ W +A S E LA+ +T+K+WD +G L TL G +
Sbjct: 239 I----WVNSLAF-SPDELK-----------LASAGYSRTVKVWDCLTGKCLETLKGMLDV 282
Query: 337 VRGVTFHPGGKYLVS 351
F P GK LVS
Sbjct: 283 AHACIFTPDGKLLVS 297
Score = 176 (67.0 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 38/100 (38%), Positives = 50/100 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S D +I+LWDV L L GH V V+F P K L S G DK VW+ +
Sbjct: 83 IASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSG 142
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R + L H + S DF + TGS D TV +W+ R
Sbjct: 143 RRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLR 182
Score = 120 (47.3 bits), Expect = 0.00013, P = 0.00013
Identities = 32/108 (29%), Positives = 48/108 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH I + + L+AS S D TI +W T L GH V +AF
Sbjct: 193 LEGHTGN-ISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDEL 251
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
L S ++K+WD T +CL+T++G F P+ ++S +
Sbjct: 252 KLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLVSGA 299
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 242 (90.2 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 52/185 (28%), Positives = 90/185 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+R+W H +V+ + F
Sbjct: 55 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ V+ S D ++K+W + L ++ H + V F P+ ++SAS DKT+K+W+
Sbjct: 115 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
++ CV + H +V + P GT +A+ D+T +VW + T + H V
Sbjct: 175 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG 234
Query: 280 VAWAP 284
+++ P
Sbjct: 235 LSFHP 239
Score = 230 (86.0 bits), Expect = 6.4e-17, P = 6.4e-17
Identities = 54/193 (27%), Positives = 90/193 (46%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H + V V F + S+D T+++W ++ +L H++
Sbjct: 88 WVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW 147
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD S+ +C+ + H VT V F P+ + +A
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W+V T ++ H V + P G L + S+D T ++ L L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 271 RGHDHTVECVAWA 283
GH VA++
Sbjct: 268 HGHQGPATTVAFS 280
Score = 226 (84.6 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 56/181 (30%), Positives = 85/181 (46%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GHR V V F +AS S D+ + +W + GH D+V + F SG LL
Sbjct: 17 GHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++++W + + H V V F + ++AS DKT+K+W
Sbjct: 77 ASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQK 136
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+ +L+ H WVR K SPDG L+ S S+D T ++W +++E H V V +
Sbjct: 137 FLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFH 196
Query: 284 P 284
P
Sbjct: 197 P 197
Score = 223 (83.6 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 49/138 (35%), Positives = 67/138 (48%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXXY-----LATGSRDKTIKLWDVGSGSLLF 328
D TV W P V ES A T S DKT+K+W LF
Sbjct: 82 DKTVRI--WVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF 139
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ +VS DDKT+++WD +++ + + H FVT +DFH +
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 389 PYVVTGSVDKTVKVWECR 406
+ +D TVKVW+ R
Sbjct: 200 TCIAAAGMDNTVKVWDVR 217
Score = 221 (82.9 bits), Expect = 7.6e-16, P = 7.6e-16
Identities = 50/160 (31%), Positives = 84/160 (52%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+LS H + V F P L+ S S+D T++LWD + E + H V + F S
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS 198
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + D ++K+WD+ T++ L+ Q H V G++F P+ +++++AS D T+K+ ++
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 258
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 186 (70.5 bits), Expect = 8.3e-27, Sum P(2) = 8.3e-27
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+KLWD S + + H +V V FHP G + + G D T++VWD
Sbjct: 160 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + HS V L FH + Y++T S D T+K+
Sbjct: 220 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 255
Score = 183 (69.5 bits), Expect = 8.3e-27, Sum P(2) = 8.3e-27
Identities = 45/149 (30%), Positives = 64/149 (42%)
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG 195
E ER GH D+V + F + K L S S D L +W M GH VT
Sbjct: 7 EDPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTC 66
Query: 196 VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
V F P+ + S SRDKT+++W H VR + DG + S+D T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAP 284
+VW+ ++ L H + V C ++P
Sbjct: 127 VKVWATHRQKFLFSLSQHINWVRCAKFSP 155
Score = 175 (66.7 bits), Expect = 5.5e-31, Sum P(2) = 5.5e-31
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A D T+K+WDV + LL H V G++FHP G YL++ D TL++ D
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG 261
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T++ F R Y +G D+ V VW+
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 38/100 (38%), Positives = 58/100 (58%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+GSRDKT+++W +V S +F H VR V F G+ V+ DDKT++VW T
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 133
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ + +L H ++V F +V+ S DKTVK+W+
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 164 (62.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 42/148 (28%), Positives = 72/148 (48%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V FHP + +A+ D T+++WD T + H +V ++F SG L+
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 245
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ S+D +LK+ D+ + L T+ GH T VAF ++ S D+ + +W+ + +
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK--SNF- 302
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSN 252
+ H E V ++ P TL +S N
Sbjct: 303 --DIVDHGE-VTKVP-RPPATLASSMGN 326
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 37/97 (38%), Positives = 47/97 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS D + +W + S + GH + V V F P G L S DKT+R+W K
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH+ V S+ F VT S DKTVKVW
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Score = 116 (45.9 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
YL T S D T+K+ D+ G LL+TL GH V F G+Y S G D+ + VW
Sbjct: 243 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 86/305 (28%), Positives = 154/305 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + F P + + S D T+++W+ + ER L GH V DIA+ +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS S D +LK++++ T + KT++GH++ V F P S V+S S D+++++W+V T
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET-KAELRGHDHTVECV 280
G C+KTL H + V + + DG+L+AS S D R+W A + K + + V V
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFV 262
Query: 281 AWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGV 340
++P + I A+ + S+ KT+K + G + + + N+ V
Sbjct: 263 KFSPN--GKYIL-ASNLDSTLKLWDF----SKGKTLKQY-TGHENSKYCIFA--NF--SV 310
Query: 341 TFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV--DK 398
T GGK+++S +D + +W+ + ++ LE H+ V + D H + +G++ D
Sbjct: 311 T---GGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDN 367
Query: 399 TVKVW 403
+ +W
Sbjct: 368 KIHIW 372
Score = 187 (70.9 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 35/101 (34%), Positives = 60/101 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL T S DKT+K+W++ TL GH V + + + +VS DDKTL++++
Sbjct: 101 YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVT 160
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R KTL+ H+++V +F+ VV+GS D++V++W+ +
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Score = 180 (68.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
+ Y+ + T++GH +++ F P ++ ++S DKT+K+W + C +TLTGH+ V
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEA 294
I S D + S S+D T +++ + T L+GH++ V C + P V S S E+
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 33/98 (33%), Positives = 60/98 (61%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+K++++ + + TL GH+N+V F+P +VS D+++R+WD
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG 203
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+KTL AHS V+++ F+R + +GS D V++W+
Sbjct: 204 MCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 160 (61.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 32/99 (32%), Positives = 59/99 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +GS D+++++WDV +G + TL H + V V+F+ G + S D +R+WDTAN
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG 245
Query: 367 RNMKTL-EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ +KTL + + V + F Y++ ++D T+K+W+
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K + PV V F P + + + D+T++LWD+ G+ + GH +S I +
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANF 308
Query: 159 S---GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR--DKT 213
S GK ++S S D + +W++ T + ++ ++GH V P + + S + D
Sbjct: 309 SVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNK 368
Query: 214 IKMW 217
I +W
Sbjct: 369 IHIW 372
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
L+ TL GH + F P GKYL + DKT+++W+ + +TL H V + +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 386 RAHPYVVTGSVDKTVKVWE 404
VV+ S DKT+K++E
Sbjct: 139 SDSRCVVSASDDKTLKIFE 157
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 86/305 (28%), Positives = 154/305 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + F P + + S D T+++W+ + ER L GH V DIA+ +
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS S D +LK++++ T + KT++GH++ V F P S V+S S D+++++W+V T
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET-KAELRGHDHTVECV 280
G C+KTL H + V + + DG+L+AS S D R+W A + K + + V V
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFV 262
Query: 281 AWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGV 340
++P + I A+ + S+ KT+K + G + + + N+ V
Sbjct: 263 KFSPN--GKYIL-ASNLDSTLKLWDF----SKGKTLKQY-TGHENSKYCIFA--NF--SV 310
Query: 341 TFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV--DK 398
T GGK+++S +D + +W+ + ++ LE H+ V + D H + +G++ D
Sbjct: 311 T---GGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDN 367
Query: 399 TVKVW 403
+ +W
Sbjct: 368 KIHIW 372
Score = 187 (70.9 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 35/101 (34%), Positives = 60/101 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL T S DKT+K+W++ TL GH V + + + +VS DDKTL++++
Sbjct: 101 YLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVT 160
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R KTL+ H+++V +F+ VV+GS D++V++W+ +
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVK 201
Score = 180 (68.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 37/120 (30%), Positives = 65/120 (54%)
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
+ Y+ + T++GH +++ F P ++ ++S DKT+K+W + C +TLTGH+ V
Sbjct: 75 ANYKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVND 134
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEA 294
I S D + S S+D T +++ + T L+GH++ V C + P V S S E+
Sbjct: 135 IAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDES 194
Score = 173 (66.0 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 33/98 (33%), Positives = 60/98 (61%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+K++++ + + TL GH+N+V F+P +VS D+++R+WD
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG 203
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+KTL AHS V+++ F+R + +GS D V++W+
Sbjct: 204 MCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
Score = 160 (61.4 bits), Expect = 7.5e-24, Sum P(2) = 7.5e-24
Identities = 32/99 (32%), Positives = 59/99 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +GS D+++++WDV +G + TL H + V V+F+ G + S D +R+WDTAN
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANG 245
Query: 367 RNMKTL-EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ +KTL + + V + F Y++ ++D T+K+W+
Sbjct: 246 QCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K + PV V F P + + + D+T++LWD+ G+ + GH +S I +
Sbjct: 249 KTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANF 308
Query: 159 S---GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR--DKT 213
S GK ++S S D + +W++ T + ++ ++GH V P + + S + D
Sbjct: 309 SVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNK 368
Query: 214 IKMW 217
I +W
Sbjct: 369 IHIW 372
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 27/79 (34%), Positives = 42/79 (53%)
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
L+ TL GH + F P GKYL + DKT+++W+ + +TL H V + +
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 386 RAHPYVVTGSVDKTVKVWE 404
VV+ S DKT+K++E
Sbjct: 139 SDSRCVVSASDDKTLKIFE 157
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 89/306 (29%), Positives = 146/306 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + + V F +L+AS S D T+ LW GH + D+A+
Sbjct: 39 LEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSH 98
Query: 162 LLVSCSADMSLKLWDM-STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
S S D +L++WD S Y+CLK ++GH + V V F P S+ ++S S D+TI++WEV
Sbjct: 99 YTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK 158
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
TG CV+ + H + + + DG+L+ S S+D + ++W KE D V
Sbjct: 159 TGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWD--AKEGTCLKTLIDDKSPAV 216
Query: 281 AWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGV 340
++A + A Y ATG K +K++ G + +F + V
Sbjct: 217 SFAKFSPNGKFILVATLDSTLKLSNY-ATG---KFLKVY-TGHTNKVFCITS----AFSV 267
Query: 341 TFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS--VDK 398
T GKY+VS +D + +WD + ++ LE H+ V S+ H + + +DK
Sbjct: 268 T---NGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDK 324
Query: 399 TVKVWE 404
T+++W+
Sbjct: 325 TIRIWK 330
Score = 247 (92.0 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 70/274 (25%), Positives = 125/274 (45%)
Query: 135 YETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVT 194
Y+ + + L GH ++ + F G LL S S D ++ LW + Y + +GH ++
Sbjct: 30 YKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGIS 89
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGY-CVKTLTGHREWVRQIKVSPDGTLLASCSND 253
+A+ +S + SAS D T+++W+ + Y C+K L GH +V + +P L+ S S D
Sbjct: 90 DLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFD 149
Query: 254 HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRD 313
T R+W + T + ++ H + V + S+ +A G+
Sbjct: 150 ETIRIWEVKTGKCVRMIKAHSMPISSVHFN---RDGSLIVSASHDGSCKIWD-AKEGTCL 205
Query: 314 KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
KT L D S ++ F F P GK+++ D TL++ + A + +K
Sbjct: 206 KT--LIDDKSPAVSFA-----------KFSPNGKFILVATLDSTLKLSNYATGKFLKVYT 252
Query: 374 AHSH--FVTSLDFHRAH-PYVVTGSVDKTVKVWE 404
H++ F + F + Y+V+GS D V +W+
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD 286
Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 33/102 (32%), Positives = 59/102 (57%)
Query: 306 YLATGSRDKTIKLWDVGSG-SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
Y + S D T+++WD S L L GH N+V V F+P +VS D+T+R+W+
Sbjct: 99 YTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVK 158
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++ ++AHS ++S+ F+R +V+ S D + K+W+ +
Sbjct: 159 TGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 294 (108.6 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 85/315 (26%), Positives = 135/315 (42%)
Query: 94 PRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQD 153
P+A F GH+ V V F P+ +L+AS S D T+RLW + H V+
Sbjct: 49 PQA-RAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRS 107
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+ F G+ L + S D S+K+W+M + L ++ H H V F P+ ++S S DKT
Sbjct: 108 VDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKT 167
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
IK+W+ CV + + + +P+GT +AS +DHT ++W + + + H
Sbjct: 168 IKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVH 227
Query: 274 DHTVECVAWAPG----VASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT 329
V CV++ P + + S Y G + G LF+
Sbjct: 228 SGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTV-SFSKGGELFS 286
Query: 330 LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS--HFVTSLDFHRA 387
G D V + + YL +C D KRN+K L S H V D +
Sbjct: 287 SGGADTQV--LLWRTNFDYL-NCKD---------MIKRNLKRLHFDSSPHLV---DIYPR 331
Query: 388 HPYVVTGSVDKTVKV 402
P+ G ++ TV++
Sbjct: 332 TPHPHEGKIE-TVEI 345
Score = 247 (92.0 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 54/168 (32%), Positives = 81/168 (48%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E++ GH++ + V F P +A+ S D + LW+ + GH D V + F
Sbjct: 11 ERY-FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
G LL S S D +++LW + H V V F + F+ +AS DK+IK+W
Sbjct: 70 PLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ + +L H WVR K SPDG L+ SCS D T ++W K+
Sbjct: 130 NMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 221 (82.9 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 47/138 (34%), Positives = 71/138 (51%)
Query: 274 DHTVECVAWAP---GVASESISEAA--XXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLF 328
D TV W P G +SE + A +LAT S DK+IK+W++ L+
Sbjct: 81 DRTVRL--WIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLY 138
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H +WVR F P G+ +VSC +DKT+++WDT NK+ + F +DF+
Sbjct: 139 SLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNG 198
Query: 389 PYVVTGSVDKTVKVWECR 406
+ + D TVK+W+ R
Sbjct: 199 TCIASAGSDHTVKIWDIR 216
Score = 201 (75.8 bits), Expect = 5.0e-25, Sum P(2) = 5.0e-25
Identities = 50/154 (32%), Positives = 70/154 (45%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
ER GH ++ + F SGK L + S D L LW+ GH VT V F P
Sbjct: 11 ERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSP 70
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + SASRD+T+++W H VR + S DG LA+ S D + +VW+
Sbjct: 71 LGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Query: 261 LATKETKAELRGHDHTVECVAWAP-GVASESISE 293
+ + L H H V C ++P G S SE
Sbjct: 131 MYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 32/98 (32%), Positives = 54/98 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+ SRD+T++LW H VR V F G++L + +DK+++VW+ +
Sbjct: 75 LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQ 134
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + +L H+H+V F +V+ S DKT+K+W+
Sbjct: 135 RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD 172
Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LAT S D + LW+ + F +GH + V V F P G L S D+T+R+W +
Sbjct: 33 LATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKR 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+AH+ V S+DF ++ T S DK++KVW
Sbjct: 93 GKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVW 129
Score = 152 (58.6 bits), Expect = 7.4e-31, Sum P(2) = 7.4e-31
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D T+K+WD+ LL H V V+FHP G Y+++ D TL++ D
Sbjct: 201 IASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R + TL+ H+ V ++ F + +G D V +W
Sbjct: 261 RLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 246 (91.7 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 52/185 (28%), Positives = 89/185 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+R+W H +V+ + F
Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 114
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ V+ S D ++K+W + L ++ H + V F P+ ++SAS DKT+K+W+
Sbjct: 115 GQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 174
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ CV + H +V + P GT +A+ D+T +VW + T + H V
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 280 VAWAP 284
+++ P
Sbjct: 235 LSFHP 239
Score = 231 (86.4 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 53/193 (27%), Positives = 90/193 (46%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H + V V F + S+D T+++W ++ +L H++
Sbjct: 88 WVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINW 147
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD ++ +C+ + H VT V F P+ + +A
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W+V T ++ H V + P G L + S+D T ++ L L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 267
Query: 271 RGHDHTVECVAWA 283
GH VA++
Sbjct: 268 HGHQGPATTVAFS 280
Score = 229 (85.7 bits), Expect = 7.5e-31, Sum P(2) = 7.5e-31
Identities = 59/183 (32%), Positives = 87/183 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGK 161
GHR V V F +AS S D+ + +W +T Y A GH D+V + F SG
Sbjct: 17 GHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFA--GHKDAVTCVNFSPSGH 74
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
LL S S D ++++W + + H V V F + ++AS DKT+K+W
Sbjct: 75 LLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHR 134
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
+ +L+ H WVR K SPDG L+ S S+D T ++W ++E H V V
Sbjct: 135 QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVD 194
Query: 282 WAP 284
+ P
Sbjct: 195 FHP 197
Score = 224 (83.9 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 49/138 (35%), Positives = 66/138 (47%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXXY-----LATGSRDKTIKLWDVGSGSLLF 328
D TV W P V ES A T S DKT+K+W LF
Sbjct: 82 DKTVRI--WVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLF 139
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ +VS DDKT+++WD ++ + + H FVT +DFH +
Sbjct: 140 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 389 PYVVTGSVDKTVKVWECR 406
+ +D TVKVW+ R
Sbjct: 200 TCIAAAGMDNTVKVWDVR 217
Score = 213 (80.0 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 49/160 (30%), Positives = 83/160 (51%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+LS H + V F P L+ S S+D T++LWD + E + H V + F S
Sbjct: 139 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + D ++K+WD+ T++ L+ Q H V ++F P+ +++++AS D T+K+ ++
Sbjct: 199 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDL 258
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 189 (71.6 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 46/149 (30%), Positives = 64/149 (42%)
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG 195
E ER GH D+V + F + K L S S D L +W M GH VT
Sbjct: 7 EDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTC 66
Query: 196 VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
V F P+ + S SRDKT+++W H VR + DG + S+D T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKT 126
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAP 284
+VWS ++ L H + V C ++P
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCAKFSP 155
Score = 186 (70.5 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 36/96 (37%), Positives = 54/96 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+KLWD S + + H +V V FHP G + + G D T++VWD
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 219
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + HS V +L FH + Y+VT S D T+K+
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKI 255
Score = 170 (64.9 bits), Expect = 7.5e-31, Sum P(2) = 7.5e-31
Identities = 35/98 (35%), Positives = 50/98 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A D T+K+WDV + LL H V ++FHP G YLV+ D TL++ D
Sbjct: 202 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 261
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T++ F R Y +G D+ V VW+
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 169 (64.5 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 38/100 (38%), Positives = 58/100 (58%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+GSRDKT+++W +V S +F H VR V F G+ V+ DDKT++VW T
Sbjct: 76 LASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTH 133
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ + +L H ++V F +V+ S DKTVK+W+
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 173
Score = 162 (62.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 35/114 (30%), Positives = 58/114 (50%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V FHP + +A+ D T+++WD T + H +V ++F SG LV
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ S+D +LK+ D+ + L T+ GH T VAF ++ S D+ + +W+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 152 (58.6 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 36/97 (37%), Positives = 47/97 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS D + +W + + + GH + V V F P G L S DKT+R+W K
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK 93
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH+ V S+ F VT S DKTVKVW
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW 130
Score = 117 (46.2 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
YL T S D T+K+ D+ G LL+TL GH V F G+Y S G D+ + VW
Sbjct: 243 YLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 294 (108.6 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 60/172 (34%), Positives = 86/172 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H PV F P + SCSEDA+ RLW +T A GH V D+AF G
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ S D + +LW L+ GH +V V F PNS +VL+ S DKT ++W+V
Sbjct: 435 YFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHR 494
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
G+ V+ GH + V + ++PDG +AS ++ +W + T +RGH
Sbjct: 495 GHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGH 546
Score = 245 (91.3 bits), Expect = 2.3e-20, Sum P(3) = 2.3e-20
Identities = 51/161 (31%), Positives = 79/161 (49%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
A GH PV V F P A+ S D T +LW + R GHL V + F +
Sbjct: 416 AYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNS 475
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+++ S+D + +LWD+ ++ GH VT VA P+ + SA + I +W++
Sbjct: 476 AYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIG 535
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
TG +KT+ GHR + + S + T+L S +D T R W +
Sbjct: 536 TGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576
Score = 194 (73.4 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 60/236 (25%), Positives = 96/236 (40%)
Query: 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT-------GYCVKTLTG---- 230
C+ T ++N+ F P+S + ++ I++W + V+ G
Sbjct: 316 CMYTFHHTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRL 375
Query: 231 --HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288
H V SPD L SCS D +AR+WS+ TK +GH V VA+ P
Sbjct: 376 LSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGP---- 431
Query: 289 ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY 348
Y AT S D+T +LW L GH + V VTFHP Y
Sbjct: 432 --------------FGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAY 477
Query: 349 LVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++ DKT R+WD +++ H+ VT++ + + + + +W+
Sbjct: 478 VLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWD 533
Score = 193 (73.0 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 58/217 (26%), Positives = 90/217 (41%)
Query: 114 FHPVFSLMASCSEDATIRLWDY-------------ETGEYERALHGHLDSVQDIAFDQSG 160
F P +++A +++ IRLW E + L H V F
Sbjct: 332 FSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDN 391
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
K L+SCS D S +LW + T L +GH V VAF P + +AS D+T ++W
Sbjct: 392 KYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCD 451
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
Y ++ GH V + P+ + + S+D T R+W + + GH V V
Sbjct: 452 HIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAV 511
Query: 281 AWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
A AP + + A+ + TG R KT++
Sbjct: 512 AIAP----DGHTMASADSEGLIHLWDIGTGRRIKTMR 544
Score = 174 (66.3 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 35/99 (35%), Positives = 49/99 (49%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ TGS DKT +LWDV G + GH V V P G + S + + +WD
Sbjct: 477 YVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGT 536
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R +KT+ H + SL F R +V+G D TV+ W+
Sbjct: 537 GRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWD 575
Score = 134 (52.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 330 LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP 389
L+ H V G TF P KYL+SC +D + R+W K + + H+ V + F
Sbjct: 375 LLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGH 434
Query: 390 YVVTGSVDKTVKVWEC 405
Y T S D+T ++W C
Sbjct: 435 YFATASHDQTAQLWSC 450
Score = 51 (23.0 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 7 QREELNKAVADYLLSNGYLSALEGFKKDAD-LPAEVEKKYSGLLE 50
Q ++LN+ V DYL GY + +A VE+K + E
Sbjct: 8 QPQDLNRIVLDYLAKKGYSRTEAMLRLEASGSGVSVEEKLKSIEE 52
Score = 43 (20.2 bits), Expect = 1.0e-30, Sum P(3) = 1.0e-30
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 307 LATGSRDKTIKLWDV 321
L +G D T++ WDV
Sbjct: 562 LVSGGSDCTVRAWDV 576
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 254 (94.5 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+R+W H +V+ + F
Sbjct: 55 YRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSD 114
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ LV+ S D ++K+W + L ++ H + V F P+ ++SAS DKT+K+W+
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDK 174
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ CV + H +V + P GT +A+ S D+T +VW + T + H V
Sbjct: 175 TSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNA 234
Query: 280 VAWAP 284
+++ P
Sbjct: 235 LSFHP 239
Score = 237 (88.5 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 55/193 (28%), Positives = 92/193 (47%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
WIP E H + V V F + + S+D T+++W ++ +L H++
Sbjct: 88 WIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINW 147
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD ++ +C+ + H VT V F P+ + +AS
Sbjct: 148 VRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASM 207
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W+V T ++ H V + P G L + S+D T ++ L L
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTL 267
Query: 271 RGHDHTVECVAWA 283
GH VA++
Sbjct: 268 HGHQGPATTVAFS 280
Score = 231 (86.4 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 51/138 (36%), Positives = 68/138 (49%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXXY-----LATGSRDKTIKLWDVGSGSLLF 328
D TV W P V ES A L T S DKT+K+W LF
Sbjct: 82 DKTVRI--WIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLF 139
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ +VS DDKT+++WD ++ + + H FVT +DFH +
Sbjct: 140 SLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSG 199
Query: 389 PYVVTGSVDKTVKVWECR 406
+ S+D TVKVW+ R
Sbjct: 200 TCIAAASMDNTVKVWDVR 217
Score = 227 (85.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 54/181 (29%), Positives = 85/181 (46%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GHR + V F +AS S D+ + +W + GH D+V + F SG LL
Sbjct: 17 GHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++++W + + H V V F + +++AS DKT+K+W
Sbjct: 77 ASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQK 136
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+ +L+ H WVR + SPDG L+ S S+D T ++W ++E H V V +
Sbjct: 137 FLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFH 196
Query: 284 P 284
P
Sbjct: 197 P 197
Score = 220 (82.5 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 51/160 (31%), Positives = 84/160 (52%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+LS H + V F P L+ S S+D T++LWD + E + H V + F S
Sbjct: 139 FSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPS 198
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + S D ++K+WD+ T++ L+ Q H V ++F P+ +++L+AS D T+K+ ++
Sbjct: 199 GTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDL 258
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 259 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 192 (72.6 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 46/149 (30%), Positives = 65/149 (43%)
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG 195
E ER GH D++ + F + K L S S D L +W M GH VT
Sbjct: 7 EDPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTC 66
Query: 196 VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
V F P+ + S SRDKT+++W H VR + DG L + S+D T
Sbjct: 67 VNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKT 126
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAP 284
+VWS ++ L H + V C ++P
Sbjct: 127 VKVWSTHRQKFLFSLSQHINWVRCARFSP 155
Score = 177 (67.4 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 34/96 (35%), Positives = 53/96 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+KLWD S + + H +V V FHP G + + D T++VWD
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTH 219
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + HS V +L FH + Y++T S D T+K+
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKI 255
Score = 172 (65.6 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 39/100 (39%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+GSRDKT+++W +V S +F H VR V F G+ LV+ DDKT++VW T
Sbjct: 76 LASGSRDKTVRIWIPNVKGESTVFR--AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTH 133
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ + +L H ++V F +V+ S DKTVK+W+
Sbjct: 134 RQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD 173
Score = 171 (65.3 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A S D T+K+WDV + LL H V ++FHP G YL++ D TL++ D
Sbjct: 202 IAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEG 261
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T++ F R Y +G D+ V VW+
Sbjct: 262 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 163 (62.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 35/114 (30%), Positives = 59/114 (51%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V FHP + +A+ S D T+++WD T + H +V ++F SG L+
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ S+D +LK+ D+ + L T+ GH T VAF ++ S D+ + +W+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 37/97 (38%), Positives = 48/97 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS D + +W + S + GH + V V F P G L S DKT+R+W K
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVK 93
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH+ V S+ F +VT S DKTVKVW
Sbjct: 94 GESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW 130
Score = 116 (45.9 bits), Expect = 9.6e-29, Sum P(2) = 9.6e-29
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
YL T S D T+K+ D+ G LL+TL GH V F G+Y S G D+ + VW
Sbjct: 243 YLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 309 (113.8 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 73/197 (37%), Positives = 100/197 (50%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E L GH PV V F P + + S SED TIRLW +T GH V D F
Sbjct: 491 ESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFS 550
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
G VS D +LW YQ L+ GH +VT F PNS++V + S D+T+++W
Sbjct: 551 PFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLW 610
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+V G CV+ TGH+ + + SP+G LAS S D +W + AEL+GH T+
Sbjct: 611 DVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTI 670
Query: 278 ECVAWA-PG--VASESI 291
+ ++ G +AS SI
Sbjct: 671 YALKFSRDGEIIASGSI 687
Score = 236 (88.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 51/160 (31%), Positives = 77/160 (48%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V F +
Sbjct: 539 GHNYPVWDTQFSPFGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVTCTRFHPNSN 596
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + S+D +++LWD+ C++ GH + +AF PN F+ S S D + +W++
Sbjct: 597 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGH 656
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
G + L GH + +K S DG ++AS S D+T R+W +
Sbjct: 657 GLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 230 (86.0 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 73/276 (26%), Positives = 119/276 (43%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+ F L+ AD ++++W ++ + K D N+ SD VL D+
Sbjct: 432 VDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLID----KESDDVLERIMDEK 487
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
T K L GH V + SPD L S S D T R+WSL T +GH
Sbjct: 488 -------TSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGH 540
Query: 274 DHTV-----------------ECVA--WAPG------VASESISEAAXXXXXXXXXXYLA 308
++ V + VA WA + + +++ Y+A
Sbjct: 541 NYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN-YVA 599
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368
TGS D+T++LWDV +G+ + GH + + F P GK+L S D + +WD +
Sbjct: 600 TGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLM 659
Query: 369 MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ + +L F R + +GS+D TV++W+
Sbjct: 660 IAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWD 695
Score = 209 (78.6 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 42/160 (26%), Positives = 75/160 (46%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184
S+D R+ D +T + LHGH V ++F L+S S D +++LW + T+ CL
Sbjct: 476 SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLV 535
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244
+GH++ V F P + +S D+ ++W ++ GH V + P+
Sbjct: 536 GYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNS 595
Query: 245 TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+A+ S+D T R+W + GH + +A++P
Sbjct: 596 NYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 635
Score = 194 (73.4 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 38/117 (32%), Positives = 61/117 (52%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V FHP + +A+ S D T+RLWD G R GH + +AF +GK
Sbjct: 580 AGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKF 639
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
L S S D + LWD+ + ++GH + + F + + + S S D T+++W+V
Sbjct: 640 LASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDV 696
Score = 191 (72.3 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 58/207 (28%), Positives = 90/207 (43%)
Query: 212 KTIKMW-EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--- 267
K I++ E C T + + + + D +L+A D T RVWS+ K+ +
Sbjct: 405 KRIRLGPETLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVK 464
Query: 268 --AEL----RGHDHTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIK 317
A+L + D +E + + I S YL + S D TI+
Sbjct: 465 SAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIR 524
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
LW + + + L GH+ V F P G Y VS G D+ R+W T + + ++ H
Sbjct: 525 LWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA 584
Query: 378 FVTSLDFHRAHPYVVTGSVDKTVKVWE 404
VT FH YV TGS D+TV++W+
Sbjct: 585 DVTCTRFHPNSNYVATGSSDRTVRLWD 611
Score = 143 (55.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 57/247 (23%), Positives = 90/247 (36%)
Query: 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241
C T +T V F +S + D T+++W V K L R++K +
Sbjct: 418 CFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVWSVTP----KKL-------RKVKSA 466
Query: 242 PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG-----VASE------- 289
D L+ S+D R+ T L GH V V+++P +SE
Sbjct: 467 ADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLW 526
Query: 290 SISE------------AAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
S+ Y +G D+ +LW L GH V
Sbjct: 527 SLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV 586
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397
FHP Y+ + D+T+R+WD N ++ H + SL F ++ +GS D
Sbjct: 587 TCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTD 646
Query: 398 KTVKVWE 404
V +W+
Sbjct: 647 GRVLLWD 653
Score = 55 (24.4 bits), Expect = 8.6e-30, Sum P(2) = 8.6e-30
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 307 LATGSRDKTIKLWDV 321
+A+GS D T++LWDV
Sbjct: 682 IASGSIDNTVRLWDV 696
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 334 (122.6 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 79/251 (31%), Positives = 123/251 (49%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
+ F P + + +ED I+LWD T + GH + + F +G+ +VS S D +
Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+LWD+ T QC+ ++ ++ VT +A PN F+ S D+ I++W V+ G V+ L GH
Sbjct: 426 ARLWDVETGQCILKLE-IENGVTAIAISPNDQFIAVGSLDQIIRVWSVS-GTLVERLEGH 483
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTVECVAWAPGVASES 290
+E V I SPD ++L S S D T +VW L AT+ + C A G
Sbjct: 484 KESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGI--CKATYTGHTDFV 541
Query: 291 ISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV 350
+S A + +GS+D++++ WD+ +G T GH N V V F P G+
Sbjct: 542 LSVAVSPDSR-----WGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFA 596
Query: 351 SCGDDKTLRVW 361
S D R+W
Sbjct: 597 SGSGDLRARIW 607
Score = 291 (107.5 bits), Expect = 7.1e-25, P = 7.1e-25
Identities = 82/291 (28%), Positives = 133/291 (45%)
Query: 120 LMASCSEDATIRLWDYETGEYERALHGHLDS------VQDIAFDQSGKLLVSCSADMSLK 173
L C++ A + +D +TG+ LH V+ IAF GK LV+ + D +K
Sbjct: 328 LATGCNQAANV--FDVQTGKKLFTLHEESPDPSRDLYVRTIAFSPDGKYLVTGTEDRQIK 385
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
LWD+ST + GH+ ++ + F N F++S S D+T ++W+V TG C+ L
Sbjct: 386 LWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLE-IEN 444
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISE 293
V I +SP+ +A S D RVWS++ + L GH +V +A++P SI
Sbjct: 445 GVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVE-RLEGHKESVYSIAFSP---DSSILL 500
Query: 294 AAXXXXXXXXXXYLATGSRD-KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC 352
+ AT S IK G T GH ++V V P ++ +S
Sbjct: 501 SGSLDKTIKVWELQATRSVGLSAIK----PEGICKATYTGHTDFVLSVAVSPDSRWGLSG 556
Query: 353 GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
D++++ WD ++ T + H + V S+ F +GS D ++W
Sbjct: 557 SKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 256 (95.2 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 64/198 (32%), Positives = 100/198 (50%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
++ SGH + + F + S S D T RLWD ETG+ L + V IA
Sbjct: 395 RYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIE-NGVTAIAISP 453
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ + + S D +++W +S ++ ++GH +V +AF P+S +LS S DKTIK+WE
Sbjct: 454 NDQFIAVGSLDQIIRVWSVSG-TLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWE 512
Query: 219 V-AT-----------GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET 266
+ AT G C T TGH ++V + VSPD S S D + + W L T ++
Sbjct: 513 LQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQS 572
Query: 267 KAELRGHDHTVECVAWAP 284
+GH ++V V ++P
Sbjct: 573 YLTCQGHKNSVISVCFSP 590
Score = 225 (84.3 bits), Expect = 7.8e-16, P = 7.8e-16
Identities = 71/276 (25%), Positives = 130/276 (47%)
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ------GHDHNVTGVAFLP 200
H V + F +GK L + + + ++D+ T + L T+ D V +AF P
Sbjct: 312 HPSVVCCVKFSNNGKYLAT-GCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIAFSP 370
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ ++++ + D+ IK+W+++T +GH + + + S +G + S S D TAR+W
Sbjct: 371 DGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWD 430
Query: 261 LATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWD 320
+ T + +L +E GV + +IS ++A GS D+ I++W
Sbjct: 431 VETGQCILKLE-----IE-----NGVTAIAISP---------NDQFIAVGSLDQIIRVWS 471
Query: 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM----------- 369
V SG+L+ L GH V + F P L+S DKT++VW+ R++
Sbjct: 472 V-SGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGIC 530
Query: 370 -KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
T H+ FV S+ + ++GS D++++ W+
Sbjct: 531 KATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWD 566
Score = 222 (83.2 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 56/165 (33%), Positives = 81/165 (49%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSA 168
V + P +A S D IR+W ER L GH +SV IAF +L+S S
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVER-LEGHKESVYSIAFSPDSSILLSGSL 504
Query: 169 DMSLKLWDMSTYQ------------CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
D ++K+W++ + C T GH V VA P+S + LS S+D++++
Sbjct: 505 DKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQF 564
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
W++ TG T GH+ V + SPDG AS S D AR+WS+
Sbjct: 565 WDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSGDLRARIWSI 609
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 337 (123.7 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 70/172 (40%), Positives = 103/172 (59%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
WI + P+ G ++ + V++++AS S+D T+RLWD TG ++ L GH V
Sbjct: 681 WICQLPKVNEKWGAELQTLEGHSNSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWV 740
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
+AF G+LL S S D +++LWD +T +T++GH + V VAF P+ + S S D
Sbjct: 741 LSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFD 800
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
KT+++W+ ATG +TL GH + VR + SPDG LLAS S D T R+W AT
Sbjct: 801 KTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPAT 852
Score = 281 (104.0 bits), Expect = 6.4e-23, P = 6.4e-23
Identities = 65/174 (37%), Positives = 97/174 (55%)
Query: 112 VIFHPVFSLMAS-CSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADM 170
++F P +L+ S SED + W + + L +++ + + +L S S D
Sbjct: 661 LVFAPQTALIRSNFSED--LPSWICQLPKVNEKWGAELQTLEGHS-NSVWAVLASGSDDE 717
Query: 171 SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG 230
+++LWD +T +T++GH V VAF P+ + S S DKT+++W+ ATG +TL G
Sbjct: 718 TVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRG 777
Query: 231 HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
H WVR + SPDG LLAS S D T R+W AT + LRGH TV VA++P
Sbjct: 778 HSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSP 831
Score = 279 (103.3 bits), Expect = 1.7e-22, P = 1.7e-22
Identities = 60/159 (37%), Positives = 92/159 (57%)
Query: 92 WIPRAPE-KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P + L GH V+ V F P L+AS S D T+RLWD TG ++ L GH +
Sbjct: 722 WDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNW 781
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ +AF G+LL S S D +++LWD +T +T++GH V VAF P+ + S S
Sbjct: 782 VRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSF 841
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLAS 249
DKT+++W+ ATG +TL + V +++ S DG+ +++
Sbjct: 842 DKTVRLWDPATGTLQQTLI-IKGTVTELQFSQDGSYIST 879
Score = 245 (91.3 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 65/178 (36%), Positives = 87/178 (48%)
Query: 234 WVRQI-KVSPD-GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS--- 288
W+ Q+ KV+ G L + H+ VW++ + D TV W P S
Sbjct: 681 WICQLPKVNEKWGAELQTLEG-HSNSVWAVLASGSD------DETVRL--WDPATGSLQQ 731
Query: 289 --ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG 346
E S LA+GS DKT++LWD +GSL TL GH NWVR V F P G
Sbjct: 732 TLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDG 791
Query: 347 KYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L S DKT+R+WD A +TL HS V S+ F + +GS DKTV++W+
Sbjct: 792 RLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 177 (67.4 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 42/93 (45%), Positives = 55/93 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS DKT++LWD +GSL TL GH + VR V F P G+ L S DKT+R+WD A
Sbjct: 794 LASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWDPATG 853
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVT--GSVD 397
+TL VT L F + Y+ T GS++
Sbjct: 854 TLQQTLIIKGT-VTELQFSQDGSYISTNLGSLN 885
Score = 46 (21.3 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 152 QDIAFDQSGKLLVSCS---ADMSLKLWDMSTYQCLKTMQGH 189
QD F SG L+ S + D K D++ CLKTMQ H
Sbjct: 490 QDSTFIISGFLVQSRTKFLVDAPKKHKDIAKC-CLKTMQSH 529
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 318 (117.0 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 70/196 (35%), Positives = 97/196 (49%)
Query: 78 VEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET 137
++G P ++ P+ + L GH PV V F P + SCSED T+RLW +T
Sbjct: 490 LDGKPLKSVLKRDRHKPQENTR-KLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDT 548
Query: 138 GEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVA 197
+ GH V D+ F G V+ S D + +LW L+ GH ++V V
Sbjct: 549 YTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVE 608
Query: 198 FLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257
F PNS++V + S DKT +MW+V TG CV+ GH V + VSPDG LAS D
Sbjct: 609 FHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIIC 668
Query: 258 VWSLATKETKAELRGH 273
VW + + +RGH
Sbjct: 669 VWDIGSGRRLKSMRGH 684
Score = 318 (117.0 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 71/220 (32%), Positives = 115/220 (52%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247
GH V GV+F P++ ++LS S DKT+++W + T + + GH + V +K SP G
Sbjct: 515 GHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYF 574
Query: 248 ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYL 307
+ S+D TAR+W+ GH + V+CV + P Y+
Sbjct: 575 VTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPN------------------SNYV 616
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
TGS DKT ++WDV +G+ + +GH N V + P G++L S G+D + VWD + R
Sbjct: 617 FTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGR 676
Query: 368 NMKTLEAHSHF-VTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+K++ H+ + SL F R +V+G D +V+VW+ +
Sbjct: 677 RLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVK 716
Score = 284 (105.0 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 70/231 (30%), Positives = 109/231 (47%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
E R L GH V ++F K L+SCS D +++LW + TY L + +GH V V F
Sbjct: 508 ENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKF 567
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P + ++AS D+T ++W Y ++ GH V ++ P+ + + S+D T R+
Sbjct: 568 SPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 259 WSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
W + T GH ++V C+A +P +LA+G D I +
Sbjct: 628 WDVHTGNCVRVFLGHTNSVNCLAVSPD------------------GRWLASGGEDGIICV 669
Query: 319 WDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368
WD+GSG L ++ GH + + F G LVS D ++RVWD N
Sbjct: 670 WDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTN 720
Score = 230 (86.0 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 48/159 (30%), Positives = 83/159 (52%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV V F P+ + S D T RLW + R GH++ V + F + +
Sbjct: 557 GHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYV 616
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S+D + ++WD+ T C++ GH ++V +A P+ ++ S D I +W++ +G
Sbjct: 617 FTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGR 676
Query: 224 CVKTLTGH-REWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+K++ GH R + + S DGT+L S D++ RVW +
Sbjct: 677 RLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 198 (74.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 60/204 (29%), Positives = 94/204 (46%)
Query: 209 SRDKTIKMWEVATGY---CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
SR K IK+ + C+ T + I+ + D TL+A+ D ++WSL K
Sbjct: 436 SRSK-IKLGAIQASLPSVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKP 494
Query: 266 TKAELRGHDH-----TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWD 320
K+ L+ H T + + + V S S YL + S DKT++LW
Sbjct: 495 LKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSP---------DNKYLLSCSEDKTVRLWS 545
Query: 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVT 380
+ + + L + GH V V F P G Y V+ D+T R+W T + ++ H + V
Sbjct: 546 LDTYTALVSYKGHTQPVWDVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVD 605
Query: 381 SLDFHRAHPYVVTGSVDKTVKVWE 404
++FH YV TGS DKT ++W+
Sbjct: 606 CVEFHPNSNYVFTGSSDKTCRMWD 629
Score = 150 (57.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 52/228 (22%), Positives = 95/228 (41%)
Query: 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241
C+ T ++N+T + F +S V + +D IK+W + G +K++ +++ +
Sbjct: 453 CMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSL-DGKPLKSV------LKRDRHK 505
Query: 242 PDGTLLASCSNDHTARVWSLA-TKETKAELR-GHDHTVECVA---WAPGVASESISEAAX 296
P H+ V+ ++ + + K L D TV + + V+ + ++
Sbjct: 506 PQENTRKLIG--HSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVW 563
Query: 297 XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
Y T S D+T +LW L GH N V V FHP Y+ + DK
Sbjct: 564 DVKFSPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDK 623
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
T R+WD ++ H++ V L ++ +G D + VW+
Sbjct: 624 TCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWD 671
Score = 42 (19.8 bits), Expect = 2.6e-29, Sum P(2) = 2.6e-29
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 5 QRQREELNKAVADYLLSNGY 24
Q + +LN+ V +YL GY
Sbjct: 74 QYSQADLNRIVLEYLNKKGY 93
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 255 (94.8 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 69/218 (31%), Positives = 113/218 (51%)
Query: 188 GHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL 246
GH + AF P+ S +++ + D T ++W+ T + TL GH WV + SPDG +
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 247 LASCSNDHTARVWSLATKETKAE-LRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXX 305
+A+ S D+T R+W + + + LRGH + ++W P + S+
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPR---------- 250
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDTA 364
LA+ S+D TIK+WD S +T+ GH N V V + GG+ L+ G D+T+RVWD
Sbjct: 251 -LASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKW--GGQGLLYSGSHDRTVRVWDIN 307
Query: 365 NK-RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVK 401
++ R + L++H+H+V L + + G+ D T K
Sbjct: 308 SQGRCINILKSHAHWVNHLSLSTDYALRI-GAFDHTGK 344
Score = 234 (87.4 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 58/187 (31%), Positives = 99/187 (52%)
Query: 101 ALSGHRSPVIKVIFHP-VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
A++GH S ++ F P S M + + D T R+WD +T L GH + V +++
Sbjct: 138 AIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPD 197
Query: 160 GKLLVSCSADMSLKLWDMSTYQCL-KTMQGHDHNVTGVAFLP-------NSDFVLSASRD 211
G+++ + S D +++LWD + QCL ++GH +T +++ P + + S+S+D
Sbjct: 198 GEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKD 257
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE-L 270
TIK+W+ + C T++GH V +K G LL S S+D T RVW + ++ L
Sbjct: 258 GTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINIL 316
Query: 271 RGHDHTV 277
+ H H V
Sbjct: 317 KSHAHWV 323
Score = 219 (82.2 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 55/169 (32%), Positives = 89/169 (52%)
Query: 123 SCSEDATIRLWDYE-TGEY----ERALHGHLDSVQDIAFDQ--SGKLLVSCSADMSLKLW 175
S S D +R+ ++ TG+ E A L++ + I S +++V+ S D ++ LW
Sbjct: 327 SLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLW 386
Query: 176 D-MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234
+ + + + + M GH V VAF P+ +++SAS D +IK+W+ G + T GH
Sbjct: 387 NPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVAS 446
Query: 235 VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
V Q+ S D LL SCS D T +VW + T++ +L GH V V W+
Sbjct: 447 VYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWS 495
Score = 206 (77.6 bits), Expect = 8.0e-14, P = 8.0e-14
Identities = 48/143 (33%), Positives = 76/143 (53%)
Query: 120 LMASCSEDATIRLWD--YETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177
+M + S+D T+ LW+ T R + GH V +AF G+ +VS S D S+KLWD
Sbjct: 373 MMVTASDDYTMFLWNPLKSTKPIAR-MTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDG 431
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
+ + T +GH +V VA+ + ++S S+D T+K+W+V T L GH++ V
Sbjct: 432 RDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYT 491
Query: 238 IKVSPDGTLLASCSNDHTARVWS 260
+ S DG + S D R+W+
Sbjct: 492 VDWSVDGKRVCSGGKDKMVRLWT 514
Score = 204 (76.9 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 56/186 (30%), Positives = 92/186 (49%)
Query: 228 LTGHREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGV 286
+ GH + +P + + + + D+TAR+W T+ L+GH + V CV+W+P
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPD- 197
Query: 287 ASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLF-TLIGHDNWVRGVTF--- 342
E +ATGS D TI+LWD SG L L GH W+ +++
Sbjct: 198 -----GEV------------IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPI 240
Query: 343 H---PGGK-YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDK 398
H PG K L S D T+++WDT ++ T+ H++ V+ + + + +GS D+
Sbjct: 241 HLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDR 299
Query: 399 TVKVWE 404
TV+VW+
Sbjct: 300 TVRVWD 305
Score = 197 (74.4 bits), Expect = 8.4e-13, P = 8.4e-13
Identities = 43/128 (33%), Positives = 69/128 (53%)
Query: 92 WIP-RAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P ++ + A ++GH+ V V F P + S S D +I+LWD G++ GH+
Sbjct: 386 WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVA 445
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
SV +A+ +LLVSCS D +LK+WD+ T + + GH V V + + V S
Sbjct: 446 SVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGG 505
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 506 KDKMVRLW 513
Score = 168 (64.2 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 53/206 (25%), Positives = 102/206 (49%)
Query: 92 WIPRAPEKF--ALSGHRSPVIKVIFHPVFSL-------MASCSEDATIRLWDYETGEYER 142
W P++ + AL GH + + + P+ + +AS S+D TI++WD + +
Sbjct: 213 WDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQY 272
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY-QCLKTMQGHDHNVTGVAFLPN 201
+ GH +SV + + G LL S S D ++++WD+++ +C+ ++ H H V ++ +
Sbjct: 273 TMSGHTNSVSCVKWGGQG-LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSL--S 329
Query: 202 SDFVLSASR-DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+D+ L D T K K L + + ++ S + ++ + S+D+T +W+
Sbjct: 330 TDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEE--MMVTASDDYTMFLWN 387
Query: 261 LATKETK--AELRGHDHTVECVAWAP 284
K TK A + GH V VA++P
Sbjct: 388 -PLKSTKPIARMTGHQKLVNHVAFSP 412
Score = 153 (58.9 bits), Expect = 4.6e-29, Sum P(2) = 4.6e-29
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ + S D +IKLWD G + T GH V V + + LVSC D TL+VWD
Sbjct: 416 YIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRT 475
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ L H V ++D+ V +G DK V++W
Sbjct: 476 RKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 138 (53.6 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 31/101 (30%), Positives = 52/101 (51%)
Query: 307 LATGSRDKTIKLWD-VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ T S D T+ LW+ + S + + GH V V F P G+Y+VS D ++++WD +
Sbjct: 374 MVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD 433
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ + T H V + + +V+ S D T+KVW+ R
Sbjct: 434 GKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVR 474
Score = 52 (23.4 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 263 TKETKAELRGHDHTVECVAWAPGVASESISEA 294
T+ + A + GH T+ C A+AP +S ++ A
Sbjct: 133 TRSSSA-IAGHGSTILCSAFAPHTSSRMVTGA 163
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 252 (93.8 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 53/191 (27%), Positives = 92/191 (48%)
Query: 94 PRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQD 153
P+A F GH + V F P SL+AS S D T+RLW H SV+
Sbjct: 49 PKA-RAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRS 107
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+ F + G+ LV+ S D S+K+W + + L ++ H + V F P+ + S D+T
Sbjct: 108 VHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRT 167
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+++W+ ++ C+ T + + + GT +AS D+T ++W + T + + H
Sbjct: 168 VRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVH 227
Query: 274 DHTVECVAWAP 284
+ V C ++ P
Sbjct: 228 NAGVNCFSFHP 238
Score = 231 (86.4 bits), Expect = 9.1e-17, P = 9.1e-17
Identities = 53/174 (30%), Positives = 90/174 (51%)
Query: 87 RSPTEW-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
+S W + R ++L+ H + V F P L+ASC +D T+RLWD + +
Sbjct: 124 KSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFT 183
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
+ S + F+ SG + S AD ++K+WD+ T + ++ + H+ V +F P+ +++
Sbjct: 184 DYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYL 243
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+S S D TIK+ ++ G + TL GH+ V + S DG L AS D +W
Sbjct: 244 ISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMW 297
Score = 230 (86.0 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 49/162 (30%), Positives = 82/162 (50%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH+ + F+P +A+ S D ++ +W+ GH D + + F SG L+
Sbjct: 16 GHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLV 75
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D +++LW S + H +V V F + +++AS DK++K+W V
Sbjct: 76 ASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKK 135
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ +L H WVR + SPDG L+ASC +D T R+W ++ +
Sbjct: 136 FLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQ 177
Score = 226 (84.6 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P E H + V V F + + S+D ++++W E ++ +L+ H +
Sbjct: 87 WTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNW 146
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+ SC D +++LWD S++QC+ + + T V F + + S+
Sbjct: 147 VRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGA 206
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D TIK+W++ T ++ H V P G L S S+D T ++ L L
Sbjct: 207 DNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTL 266
Query: 271 RGHDHTVECVAWA 283
GH V V ++
Sbjct: 267 HGHKGPVLTVTFS 279
Score = 219 (82.2 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 52/194 (26%), Positives = 86/194 (44%)
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
++ATG C K+L W ++P + + A + D TV
Sbjct: 32 QLATGSCDKSLM---IW----NLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTV 84
Query: 278 ECVAWAPGVASESI-----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
W P + ES + + L T S DK++K+W V L++L
Sbjct: 85 RL--WTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNR 142
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
H NWVR F P G+ + SCGDD+T+R+WDT++ + + + T +DF+ + +
Sbjct: 143 HTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIA 202
Query: 393 TGSVDKTVKVWECR 406
+ D T+K+W+ R
Sbjct: 203 SSGADNTIKIWDIR 216
Score = 206 (77.6 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 50/164 (30%), Positives = 77/164 (46%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
MAS ED T+ ER GH D + F+ + K L + S D SL +W+++
Sbjct: 1 MASVMEDPTL----------ERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPK 50
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
GH +TGV F P+ V S+SRD+T+++W + H VR +
Sbjct: 51 ARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHF 110
Query: 241 SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
S DG L + S+D + +VW + K+ L H + V C ++P
Sbjct: 111 SRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSP 154
Score = 153 (58.9 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D TIK+WD+ + L+ H+ V +FHP G YL+S D T+++ D
Sbjct: 201 IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEG 260
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H V ++ F R +G D V +W+
Sbjct: 261 RLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 143 (55.4 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D+T++LWD S + + V F+ G + S G D T+++WD
Sbjct: 159 IASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTN 218
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ ++ + H+ V FH + Y+++GS D T+K+
Sbjct: 219 KLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKI 254
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 32/107 (29%), Positives = 52/107 (48%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F+ + +AS D TI++WD T + + H V +F SG L+S S+D +
Sbjct: 192 VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDST 251
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+K+ D+ + + T+ GH V V F + D S D + MW+
Sbjct: 252 IKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWK 298
Score = 119 (46.9 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 32/79 (40%), Positives = 41/79 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW---- 361
YL +GS D TIK+ D+ G L++TL GH V VTF G S G D + +W
Sbjct: 242 YLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTNF 301
Query: 362 DTANKRNMKTLEAHSHFVT 380
D+ N R + L HS VT
Sbjct: 302 DSLNYREL--LSKHSKRVT 318
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 90/284 (31%), Positives = 133/284 (46%)
Query: 99 KFALS-GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIA 155
K LS GH+ V KV + P + +AS S DAT +W ++E L GH + V+ +A
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112
Query: 156 FDQSGKLLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK 212
+ SG LL +CS D S+ +W++ Y+C+ + H +V V + P+ + + SAS D
Sbjct: 113 WAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172
Query: 213 TIKMW--EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS--LATKETKA 268
T+K++ E C TL GH V I P G LASCS+D T R+W L E
Sbjct: 173 TVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 269 ELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS--- 325
G D + +CV G + +I + A LAT D I++++ GS
Sbjct: 233 ACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGA----LATACGDDAIRVFEEDPGSDPQ 288
Query: 326 -LLFTLIGH-----DNWVRGVTFHPG-GKYLVSCGDDKTLRVWD 362
F+L H V V ++P L SC DD + W+
Sbjct: 289 QPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDGEVAFWE 332
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 70/218 (32%), Positives = 111/218 (50%)
Query: 154 IAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTM-QGHDHNVTGVAFLPNSDFVLSASR 210
+A++ +G LL SC D +++W + ++ C + +GH V VA+ P +++ SAS
Sbjct: 22 LAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 211 DKTIKMWEVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK---E 265
D T +W+ CV TL GH V+ + +P G LLA+CS D + VW + + E
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW-DVGSG 324
+ L H V+ V W P S+ + LA+ S D T+KL+ + G
Sbjct: 142 CVSVLNSHTQDVKHVVWHP---SQEL---------------LASASYDDTVKLYQEEGDD 183
Query: 325 SLLF-TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
+ TL GH++ V + F P G+ L SC DD+T+R+W
Sbjct: 184 WVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 74/261 (28%), Positives = 126/261 (48%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEY--ERAL-HGHLDSVQDIAFDQSGKLLVSCSADM 170
++P +L+ASC D IR+W E + + L GH +V+ +A+ G L S S D
Sbjct: 24 WNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 171 SLKLW--DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV--ATGY-CV 225
+ +W + ++C+ T++GH++ V VA+ P+ + + + SRDK++ +WEV Y CV
Sbjct: 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143
Query: 226 KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWA 283
L H + V+ + P LLAS S D T +++ + A L GH+ TV +A+
Sbjct: 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFD 203
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTF 342
P + + ++ + YL + D S + TL G H + V +
Sbjct: 204 P--SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP-SWKCVCTLSGFHTRTIYDVAW 260
Query: 343 -HPGGKYLVSCGDDKTLRVWD 362
G +CGDD +RV++
Sbjct: 261 CQLTGALATACGDD-AIRVFE 280
Score = 202 (76.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 65/218 (29%), Positives = 102/218 (46%)
Query: 196 VAFLPNSDFVLSASRDKTIKMW--EVATGYCVKTLT-GHREWVRQIKVSPDGTLLASCSN 252
+A+ P + S D+ I++W E + C L+ GH+ VR++ SP G LAS S
Sbjct: 22 LAWNPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 253 DHTARVWSLATK--ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATG 310
D T +W E L GH++ V+ VAWAP S ++ LAT
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP---SGNL---------------LATC 123
Query: 311 SRDKTIKLWDVGSGS---LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
SRDK++ +W+V + L H V+ V +HP + L S D T++++
Sbjct: 124 SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDD 183
Query: 368 NM--KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ TLE H V S+ F + + + S D+TV++W
Sbjct: 184 WVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 184 (69.8 bits), Expect = 8.4e-12, P = 8.4e-12
Identities = 52/172 (30%), Positives = 78/172 (45%)
Query: 241 SPDGTLLASCSNDHTARVWSLATKE--TKAEL-RGHDHTVECVAWAPGVASESISEAAXX 297
+P GTLLASC D R+W K+ L GH TV VAW+P
Sbjct: 25 NPTGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP------------- 71
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDD 355
YLA+ S D T +W + TL GH+N V+ V + P G L +C D
Sbjct: 72 -----CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD 126
Query: 356 KTLRVWDTANKRN---MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
K++ VW+ + + L +H+ V + +H + + + S D TVK+++
Sbjct: 127 KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYQ 178
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 90/294 (30%), Positives = 135/294 (45%)
Query: 87 RSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RAL 144
R WI ++ GH+ V KV + P + +AS S DAT +W ++E L
Sbjct: 45 REGDSWICKS---VLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNEDDFECVTTL 101
Query: 145 HGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPN 201
GH + V+ +A+ SG LL +CS D S+ +W++ Y+C+ + H +V V + P+
Sbjct: 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161
Query: 202 SDFVLSASRDKTIKMW--EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+ + SAS D T+K++ E C TL GH V + P G LASCS+D T R+W
Sbjct: 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Query: 260 S--LATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
L E G + + +CV G S +I + A LAT D I+
Sbjct: 222 RQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGT----LATACGDDAIR 277
Query: 318 LWDVGSGS----LLFTLIGH-----DNWVRGVTFHPGGK-YLVSCGDDKTLRVW 361
+++ GS F+L H V V ++P + L SC DD L W
Sbjct: 278 VFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDDGELAFW 331
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 70/218 (32%), Positives = 110/218 (50%)
Query: 154 IAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTM-QGHDHNVTGVAFLPNSDFVLSASR 210
+A++ +G LL SC D S+++W + ++ C + +GH V VA+ P +++ SAS
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 211 DKTIKMWEVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK---E 265
D T +W+ CV TL GH V+ + +P G LLA+CS D + VW + + E
Sbjct: 82 DATTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW--DVGS 323
+ L H V+ V W P S+ + LA+ S D T+KL+ +
Sbjct: 142 CVSVLNSHTQDVKHVVWHP---SQEL---------------LASASYDDTVKLYREEEDD 183
Query: 324 GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
TL GH++ V + F P G+ L SC DD+T+R+W
Sbjct: 184 WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 73/261 (27%), Positives = 127/261 (48%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEY--ERAL-HGHLDSVQDIAFDQSGKLLVSCSADM 170
++P +L+ASC D ++R+W E + + L GH +V+ +A+ G L S S D
Sbjct: 24 WNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 171 SLKLWDMST--YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV--ATGY-CV 225
+ +W + ++C+ T++GH++ V VA+ P+ + + + SRDK++ +WEV Y CV
Sbjct: 84 TTCIWKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143
Query: 226 KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWA 283
L H + V+ + P LLAS S D T +++ + A L GH+ TV +A+
Sbjct: 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD 203
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTF 342
P + + ++ + YL G+ S + TL G H + V +
Sbjct: 204 P--SGQRLASCSDDRTVRIWRQYLP-GNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAW 260
Query: 343 -HPGGKYLVSCGDDKTLRVWD 362
G +CGDD +RV++
Sbjct: 261 CQLTGTLATACGDD-AIRVFE 280
Score = 199 (75.1 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 65/218 (29%), Positives = 102/218 (46%)
Query: 196 VAFLPNSDFVLSASRDKTIKMW--EVATGYCVKTLT-GHREWVRQIKVSPDGTLLASCSN 252
+A+ P + S D+++++W E + C L GH+ VR++ SP G LAS S
Sbjct: 22 LAWNPAGTLLASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASF 81
Query: 253 DHTARVWSLATK--ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATG 310
D T +W E L GH++ V+ VAWAP S ++ LAT
Sbjct: 82 DATTCIWKKNEDDFECVTTLEGHENEVKSVAWAP---SGNL---------------LATC 123
Query: 311 SRDKTIKLWDVGSGS---LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
SRDK++ +W+V + L H V+ V +HP + L S D T++++
Sbjct: 124 SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD 183
Query: 368 NM--KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ TLE H V SL F + + + S D+TV++W
Sbjct: 184 WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLI---GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363
LA+ D+++++W S + + GH VR V + P G YL S D T +W
Sbjct: 31 LASCGGDRSVRIWGREGDSWICKSVLCEGHQRTVRKVAWSPCGNYLASASFDATTCIWKK 90
Query: 364 ANKRNMK---TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
N+ + + TLE H + V S+ + + + T S DK+V VWE
Sbjct: 91 -NEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 298 (110.0 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 78/279 (27%), Positives = 126/279 (45%)
Query: 91 EWIPRAPEKFALSGHRSPVIKVIFHPVFS----LMASCSEDATIRLWDYETGEYERALHG 146
EWI + K P ++H FS +ASC D T++++ ETGE +
Sbjct: 604 EWINKKNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKA 663
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
H D V AF + + +CS D +K+W+ T + H V F NS ++L
Sbjct: 664 HEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLL 723
Query: 207 --SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
+AS D +K+W++ C T+ GH V + SPD LLASCS D T ++W + +
Sbjct: 724 LATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSA 783
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG 324
+ + + + P E I + + +++K I LW++ S
Sbjct: 784 NERKSINVKQFFLN--SEEPQEDMEVIVKCCSWSADGTR---IMVAAKNK-IFLWNMDSC 837
Query: 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363
+ GH +WV V F P G ++ DD+T+R+W+T
Sbjct: 838 LKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWET 876
Score = 221 (82.9 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 53/165 (32%), Positives = 80/165 (48%)
Query: 116 PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW 175
P +A ED + + + ++ GH +V+ I F GK L+S S D S+++W
Sbjct: 936 PHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVW 995
Query: 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK-MWEVATGYCVKTLTGHREW 234
+ + + + +Q H V L NS +LS S D T+K +W + TG K H++
Sbjct: 996 NWQSEEYV-FLQAHQETVKDFKLLKNSK-LLSWSFDGTVKKIWSIITGRIEKDFVCHQDT 1053
Query: 235 VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
V +SPD T +S S D TA++WS ELRGH V C
Sbjct: 1054 VLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRC 1098
Score = 187 (70.9 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 69/275 (25%), Positives = 120/275 (43%)
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
H D+V F + G+ + SC D +L+++ T + L ++ H+ V AF + F+
Sbjct: 622 HTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 681
Query: 207 SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG--TLLASCSNDHTARVWSLATK 264
+ S DK +K+W TG V H E V + + LLA+ S+D ++W L K
Sbjct: 682 TCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATASSDCFLKLWDLNQK 741
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG 324
E + + GH ++V ++P + + LA+ S D T+KLWDV S
Sbjct: 742 ECRNTMFGHTNSVNHCRFSP---DDKL---------------LASCSADGTLKLWDVKSA 783
Query: 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSC---GDDKTLRVWDTANKR----NM----KTLE 373
+ ++ ++ + +V C D T R+ A + NM K +
Sbjct: 784 NERKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGT-RIMVAAKNKIFLWNMDSCLKVAD 842
Query: 374 AHSH--FVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
H +V + F +T S D+T+++WE +
Sbjct: 843 CRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETK 877
Score = 184 (69.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 49/163 (30%), Positives = 83/163 (50%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH+ V + F + S S+D++I++W++++ EY L H ++V+D ++ KLL
Sbjct: 966 GHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV-FLQAHQETVKDFKLLKNSKLL 1024
Query: 164 VSCSADMSLK-LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
S S D ++K +W + T + K H V P++ S S DKT K+W
Sbjct: 1025 -SWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELL 1083
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ L GH+ VR S D TLLA+ ++ R+W+++ E
Sbjct: 1084 SPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1126
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/187 (25%), Positives = 77/187 (41%)
Query: 92 WIPRAPEKFALSGHRSPV--IKVIFHPVFSLMASCSEDATIR-LWDYETGEYERALHGHL 148
W ++ E L H+ V K++ + S + S S D T++ +W TG E+ H
Sbjct: 995 WNWQSEEYVFLQAHQETVKDFKLLKN---SKLLSWSFDGTVKKIWSIITGRIEKDFVCHQ 1051
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
D+V S SAD + K+W L ++GH V F +S + +
Sbjct: 1052 DTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATG 1111
Query: 209 SRDKTIKMWEVATG----YCVKTLT--G---HREWVRQIKVSPDGTLLASCSNDHTARVW 259
+ I++W V+ G C L G H WV + SPD +L S + W
Sbjct: 1112 DDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGG--YLKWW 1169
Query: 260 SLATKET 266
++ T E+
Sbjct: 1170 NVVTGES 1176
Score = 121 (47.7 bits), Expect = 0.00077, P = 0.00077
Identities = 38/148 (25%), Positives = 66/148 (44%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H+ V+ P + +S S D T ++W +E L GH V+ F LL
Sbjct: 1050 HQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLA 1109
Query: 165 SCSADMSLKLWDMST----YQCLKTM--QG---HDHNVTGVAFLPNSDFVLSASRDKTIK 215
+ + +++W++S + C + +G H VT + F P+S ++SA +K
Sbjct: 1110 TGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGG--YLK 1167
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPD 243
W V TG +T + +++I VS D
Sbjct: 1168 WWNVVTGESSQTFYTNGTCLKKIHVSSD 1195
Score = 101 (40.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/127 (24%), Positives = 60/127 (47%)
Query: 169 DMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
D ++++ ++ + ++ GH V + F + ++S+S D +I++W + V L
Sbjct: 947 DGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYV-FL 1005
Query: 229 TGHREWVRQIKVSPDGTLLASCSNDHTAR-VWSLATKETKAELRGHDHTVECVAWAPGVA 287
H+E V+ K+ + LL S S D T + +WS+ T + + H TV +P
Sbjct: 1006 QAHQETVKDFKLLKNSKLL-SWSFDGTVKKIWSIITGRIEKDFVCHQDTVLSCDISPDAT 1064
Query: 288 SESISEA 294
S + A
Sbjct: 1065 KFSSTSA 1071
Score = 84 (34.6 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFT----LI--G---HDNWVRGVTFHPGGKYLVSCGDDKT 357
LATG + I++W+V +G LL L+ G H WV + F P K LVS G
Sbjct: 1108 LATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSKMLVSAGG--Y 1165
Query: 358 LRVWDTANKRNMKT 371
L+ W+ + +T
Sbjct: 1166 LKWWNVVTGESSQT 1179
Score = 80 (33.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 19/55 (34%), Positives = 26/55 (47%)
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
S DKT K+W S L L GH VR F L + D+ +R+W+ +N
Sbjct: 1070 SADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSN 1124
Score = 61 (26.5 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 13/60 (21%), Positives = 28/60 (46%)
Query: 344 PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
P +Y+ G+D + + + N R ++ H V + F +++ S D +++VW
Sbjct: 936 PHLQYIAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVW 995
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 326 (119.8 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 68/183 (37%), Positives = 97/183 (53%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH PV + F P +L+ SCSED+TIRLW T GH+ V D+ F G
Sbjct: 445 SLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHG 504
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
VSCS D + +LW + Q L+ GH +V V F PNS++V + S D+T+++W+
Sbjct: 505 YYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNM 564
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
TG V+ +TGH+ V + S G LAS S DH +W L+ L H TV +
Sbjct: 565 TGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTI 624
Query: 281 AWA 283
++
Sbjct: 625 TFS 627
Score = 257 (95.5 bits), Expect = 1.6e-19, P = 1.6e-19
Identities = 51/159 (32%), Positives = 86/159 (54%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184
S D +R+ D +GE R+L GH V AF LL+SCS D +++LW + T+ C+
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244
T +GH + V V F P+ + +S S DKT ++W + ++ GH V ++ P+
Sbjct: 487 TYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNS 546
Query: 245 TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+A+ S+D T R+W T ++ + GH +V +A++
Sbjct: 547 NYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFS 585
Score = 246 (91.7 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 57/170 (33%), Positives = 85/170 (50%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV V F P SCS D T RLW ++ + R GHL V + F + +
Sbjct: 490 GHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYV 549
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S+D +++LWD T Q ++ M GH +V+ +AF ++ S S D I +W+++ G
Sbjct: 550 ATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGS 609
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
V TL H V I S DGT+LA+ D+ +W K T+ + H
Sbjct: 610 LVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFH-KVTEDYISNH 658
Score = 208 (78.3 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 51/167 (30%), Positives = 86/167 (51%)
Query: 119 SLMASCS-EDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177
S M +C D+++R+W + R L DS++++ D+ SAD+++++ D
Sbjct: 389 STMLACGFGDSSVRIWSLTPAKL-RTLKD-ADSLREL--DKE-------SADINVRMLDD 437
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
+ + +++ GH V AF P + +LS S D TI++W + T CV T GH V
Sbjct: 438 RSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWD 497
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
++ +P G SCS D TAR+W+ + + GH V+CV + P
Sbjct: 498 VRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHP 544
Score = 198 (74.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 57/191 (29%), Positives = 85/191 (44%)
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA-----ELR-----GHDHT 276
T+ + V ++S D T+LA D + R+WSL + + LR D
Sbjct: 372 TVLNSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADIN 431
Query: 277 VECVAWAPGVASESI---SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
V + G + S+ + L + S D TI+LW + + S + T GH
Sbjct: 432 VRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGH 491
Query: 334 DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVT 393
V V F P G Y VSC DKT R+W T + + ++ H V + FH YV T
Sbjct: 492 VYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVAT 551
Query: 394 GSVDKTVKVWE 404
GS D+TV++W+
Sbjct: 552 GSSDRTVRLWD 562
Score = 177 (67.4 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 33/99 (33%), Positives = 53/99 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y + S DKT +LW S L +GH + V V FHP Y+ + D+T+R+WD
Sbjct: 506 YFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMT 565
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++++ + H V+SL F Y+ +GSVD + +W+
Sbjct: 566 GQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWD 604
Score = 166 (63.5 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWD +G + + GH V + F G+YL S D + +WD +N
Sbjct: 548 YVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSN 607
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H+ VT++ F R + +D + +W+
Sbjct: 608 GSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 105/412 (25%), Positives = 188/412 (45%)
Query: 3 LSQRQREELNKAVADYLLSNGYLSALEGFKKDADLPAEVEKKYSGLLEKKWTSVIRLQKK 62
L++RQR + + L + L +G ++ + V+ + L+ +K ++ L+K
Sbjct: 72 LARRQRLQ-QLMIEKSLEGDNPLDVDQGASENIEKETYVQGSHELLVARKKIALYSLEKA 130
Query: 63 VIXXXXXXXXXXXXYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMA 122
+ E + +S E + +A + G P+ V F + A
Sbjct: 131 KLRLKKEREISEIPVPE--IVLSGKSSIEHLQKAELMGSQIGGERPIAIVRFSNNGNHFA 188
Query: 123 SCSEDATIRLWDYETGEYERALHGHLDSVQDI-------AFD-QSGKL-LVSCSADMSLK 173
S S +++W+ + + GH D V + A+D S +L L + +AD ++
Sbjct: 189 SGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVC 248
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
LW S L ++GH V VAF P+ D+++SAS D T ++W+V TG + GH E
Sbjct: 249 LWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSE 308
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISE 293
+ I PDG+L++S ND R+W L + ++ L H + +AW+P
Sbjct: 309 GIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPN-------- 360
Query: 294 AAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG--KYLVS 351
LAT S D T+K+WD+ SL T+ H + V V + G +++ +
Sbjct: 361 ----------GYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIAT 410
Query: 352 CGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
G D +++W+ N +K++ H V S+D + ++ +G D+T+K+W
Sbjct: 411 SGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGY-GDRFISSG-YDRTIKLW 460
Score = 171 (65.3 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 52/170 (30%), Positives = 71/170 (41%)
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGV-ASESISEAAX 296
++ S +G AS S +VW+ RGH V + W P A ++ SE
Sbjct: 178 VRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLT 237
Query: 297 XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
LATG+ D T+ LW + L L GH V V FHP G YLVS D
Sbjct: 238 ----------LATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDT 287
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
T R+WD + E HS + S+ V +G D ++W+ R
Sbjct: 288 TWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLR 337
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 320 (117.7 bits), Expect = 2.2e-28, P = 2.2e-28
Identities = 94/335 (28%), Positives = 149/335 (44%)
Query: 82 PTRAKRSPT-EWIPRAPEKF--ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG 138
P +A P +W P P K +SGH V + P + S D TI++WD +G
Sbjct: 181 PKKAPTMPKPQWHP--PWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASG 238
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ + +L GH+ +V+ + L SC D +K WD+ + ++ GH V G+
Sbjct: 239 KLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDL 298
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P D +++ SRD T ++W+V T V TL+GH V +K + + S+D T R+
Sbjct: 299 HPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRL 358
Query: 259 WSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
W L +T+ L H +V V P A+GS D IK
Sbjct: 359 WDLVAGKTRVTLTNHKKSVRAVILHP------------------RHYTFASGSPDN-IKQ 399
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
W G+ + L GH+ + +T + G LVS D+ T+ +WD N + + A
Sbjct: 400 WKFPDGNFIQNLSGHNAIINTLTVNSDG-VLVSGADNGTMHLWDWRTGYNFQRVHAAVQ- 457
Query: 379 VTSLD---------FHRAHPYVVTGSVDKTVKVWE 404
SLD F ++ ++T DKT+KV++
Sbjct: 458 PGSLDSESGIFACVFDQSESRLLTAEADKTIKVYK 492
Score = 246 (91.7 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 75/287 (26%), Positives = 122/287 (42%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
R + GHL V+ IA + + V+ SAD ++K+WD+++ + ++ GH V GV
Sbjct: 200 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSAR 259
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
S ++ S DK +K W++ ++ GH V + + P +L +CS D TAR+W +
Sbjct: 260 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 319
Query: 262 ATKETKAELRGHDH---TVECVAWAPGVASESIS--------------------EAAXXX 298
TK + L GH + TV+C A P V + S + +
Sbjct: 320 RTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 379
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y IK W G+ + L GH+ + +T + G LVS D+ T+
Sbjct: 380 VILHPRHYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINTLTVNSDG-VLVSGADNGTM 438
Query: 359 RVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+WD + T +F R H V GS+D ++ C
Sbjct: 439 HLWD---------------WRTGYNFQRVHAAVQPGSLDSESGIFAC 470
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ TGS D+TIK+WD+ SG L +L GH + VRGV YL SCG+DK ++ WD
Sbjct: 220 WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSCGEDKQVKCWDLEY 279
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++ H V LD H +VT S D T ++W+ R
Sbjct: 280 NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 320
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 322 (118.4 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 93/317 (29%), Positives = 150/317 (47%)
Query: 105 HRSPVIKVIFHPVFSLMAS-CSEDATIRLWDYETGEYERAL--HGHLDS---VQDIAFDQ 158
H S V V F +A+ C+ A I +D +TG+ A D ++ + F
Sbjct: 280 HNSVVCCVNFSNDGKYLATGCNRSAQI--YDVDTGKKVHAFVDESEKDGDLYIRSVCFSP 337
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
G L + + D ++K+WD+ T + T GH+ ++ + + + F++S S DK K+W+
Sbjct: 338 DGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWD 397
Query: 219 VATGYCVKTL----TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
+ G C TL G + V + +SPDG L+A+ S D+ R+W T GH
Sbjct: 398 IEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHL 457
Query: 275 HTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV-GSGS---LLFTL 330
+V VA++P S LA+GS DK++KLWD+ GS S T
Sbjct: 458 DSVYSVAFSPDGKS------------------LASGSLDKSLKLWDLSGSRSRSRCRATF 499
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF---HRA 387
GH ++V V F P G +L+S D++++ WD N L+ H + V S+ + +
Sbjct: 500 NGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNS 559
Query: 388 HPYVVTGSVDKTVKVWE 404
H TGS D ++W+
Sbjct: 560 HGVFATGSGDFRSRLWK 576
Score = 269 (99.8 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 60/163 (36%), Positives = 87/163 (53%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
G ++ V V P L+A+ S D +RLWD +TG + GHLDSV +AF GK L
Sbjct: 413 GPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL 472
Query: 164 VSCSADMSLKLWDMS----TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
S S D SLKLWD+S +C T GH V VAF P+ +++S S+D++++ W+
Sbjct: 473 ASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDP 532
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGT---LLASCSNDHTARVW 259
G L GH+ V + +SP + A+ S D +R+W
Sbjct: 533 RNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 266 (98.7 bits), Expect = 7.2e-21, P = 7.2e-21
Identities = 76/274 (27%), Positives = 129/274 (47%)
Query: 144 LHG--HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCL-----KTMQGHDHNVTGV 196
LH H V + F GK L + + S +++D+ T + + ++ + D + V
Sbjct: 275 LHNLQHNSVVCCVNFSNDGKYLAT-GCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSV 333
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
F P+ +++ + + DKT+K+W++ T T GH + + S DG + S S D A
Sbjct: 334 CFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKA 393
Query: 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTI 316
++W + + L G++ V GV S ++S +A GS D +
Sbjct: 394 KIWDIEKGKCAFTL-GNEE----VGPKNGVTSVAMSPDGRL---------VAAGSLDNIV 439
Query: 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK----TL 372
+LWD +G L GH + V V F P GK L S DK+L++WD + R+ T
Sbjct: 440 RLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATF 499
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
H FV S+ F ++++GS D++V+ W+ R
Sbjct: 500 NGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPR 533
Score = 240 (89.5 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 57/189 (30%), Positives = 93/189 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH----GHLDSVQDIAFDQS 159
GH + + + + S S D ++WD E G+ L G + V +A
Sbjct: 367 GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+L+ + S D ++LWD T L+ +GH +V VAF P+ + S S DK++K+W++
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDL 486
Query: 220 A----TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+ C T GH+++V + SPDG+ L S S D + + W T L+GH +
Sbjct: 487 SGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKN 546
Query: 276 TVECVAWAP 284
+V VA +P
Sbjct: 547 SVISVALSP 555
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 242 (90.2 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 52/185 (28%), Positives = 90/185 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ +GH+ V V F P L+AS S D T+R+W H +V+ + F
Sbjct: 17 YRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSD 76
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ V+ S D ++K+W + L ++ H + V F P+ ++SAS DKT+K+W+
Sbjct: 77 GQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDK 136
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
++ CV + H +V + P GT +A+ D+T +VW + T + H V
Sbjct: 137 SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNG 196
Query: 280 VAWAP 284
+++ P
Sbjct: 197 LSFHP 201
Score = 230 (86.0 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 54/193 (27%), Positives = 90/193 (46%)
Query: 92 WIPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W+P E H + V V F + S+D T+++W ++ +L H++
Sbjct: 50 WVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW 109
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ F G+L+VS S D ++KLWD S+ +C+ + H VT V F P+ + +A
Sbjct: 110 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 169
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W+V T ++ H V + P G L + S+D T ++ L L
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 229
Query: 271 RGHDHTVECVAWA 283
GH VA++
Sbjct: 230 HGHQGPATTVAFS 242
Score = 223 (83.6 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 49/138 (35%), Positives = 67/138 (48%)
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXXY-----LATGSRDKTIKLWDVGSGSLLF 328
D TV W P V ES A T S DKT+K+W LF
Sbjct: 44 DKTVRI--WVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLF 101
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
+L H NWVR F P G+ +VS DDKT+++WD +++ + + H FVT +DFH +
Sbjct: 102 SLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSG 161
Query: 389 PYVVTGSVDKTVKVWECR 406
+ +D TVKVW+ R
Sbjct: 162 TCIAAAGMDNTVKVWDVR 179
Score = 221 (82.9 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 50/160 (31%), Positives = 84/160 (52%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+LS H + V F P L+ S S+D T++LWD + E + H V + F S
Sbjct: 101 FSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPS 160
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G + + D ++K+WD+ T++ L+ Q H V G++F P+ +++++AS D T+K+ ++
Sbjct: 161 GTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDL 220
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G + TL GH+ + S G AS +D VW
Sbjct: 221 MEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 203 (76.5 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 47/158 (29%), Positives = 75/158 (47%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D+ + +W + GH D+V + F SG LL S S D ++++W +
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL 246
+ H V V F + ++AS DKT+K+W + +L+ H WVR K SPDG L
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 247 LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+ S S+D T ++W +++E H V V + P
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHP 159
Score = 186 (70.5 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 35/96 (36%), Positives = 53/96 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ + S DKT+KLWD S + + H +V V FHP G + + G D T++VWD
Sbjct: 122 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTH 181
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
R ++ + HS V L FH + Y++T S D T+K+
Sbjct: 182 RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKI 217
Score = 175 (66.7 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A D T+K+WDV + LL H V G++FHP G YL++ D TL++ D
Sbjct: 164 IAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG 223
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + TL H T++ F R Y +G D+ V VW+
Sbjct: 224 RLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 261
Score = 167 (63.8 bits), Expect = 9.9e-10, P = 9.9e-10
Identities = 38/100 (38%), Positives = 58/100 (58%)
Query: 307 LATGSRDKTIKLW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
LA+GSRDKT+++W +V S +F H VR V F G+ V+ DDKT++VW T
Sbjct: 38 LASGSRDKTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSFVTASDDKTVKVWATH 95
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ + +L H ++V F +V+ S DKTVK+W+
Sbjct: 96 RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD 135
Score = 164 (62.8 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 42/148 (28%), Positives = 72/148 (48%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V FHP + +A+ D T+++WD T + H +V ++F SG L+
Sbjct: 148 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 207
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ S+D +LK+ D+ + L T+ GH T VAF ++ S D+ + +W+ + +
Sbjct: 208 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWK--SNF- 264
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSN 252
+ H E V ++ P TL +S N
Sbjct: 265 --DIVDHGE-VTKVP-RPPATLASSMGN 288
Score = 137 (53.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 33/91 (36%), Positives = 42/91 (46%)
Query: 313 DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
D + +W + S + GH + V V F P G L S DKT+R+W K
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH+ V S+ F VT S DKTVKVW
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVW 92
Score = 116 (45.9 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 24/56 (42%), Positives = 31/56 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
YL T S D T+K+ D+ G LL+TL GH V F G+Y S G D+ + VW
Sbjct: 205 YLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 89/284 (31%), Positives = 133/284 (46%)
Query: 99 KFALS-GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIA 155
K LS GH+ V KV + P + +AS S DAT +W ++E L GH + V+ +A
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112
Query: 156 FDQSGKLLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK 212
+ SG LL +CS D S+ +W++ Y+C+ + H +V V + P+ + + SAS D
Sbjct: 113 WAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLSSHTQDVKHVVWHPSQELLASASYDD 172
Query: 213 TIKMW--EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS--LATKETKA 268
T+K++ E C TL GH V I P G LASCS+D T R+W L E
Sbjct: 173 TVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 269 ELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS--- 325
G D + +C+ G + +I + A LAT D I++++ GS
Sbjct: 233 ACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGA----LATACGDDAIRVFEEDPGSDPQ 288
Query: 326 -LLFTLIGH-----DNWVRGVTFHPGGK-YLVSCGDDKTLRVWD 362
F+L H V V ++P L SC DD + W+
Sbjct: 289 QPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWE 332
Score = 273 (101.2 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 71/218 (32%), Positives = 111/218 (50%)
Query: 154 IAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTM-QGHDHNVTGVAFLPNSDFVLSASR 210
+A++ SG LL SC D +++W + ++ C + +GH V VA+ P +++ SAS
Sbjct: 22 LAWNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 211 DKTIKMWEVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK---E 265
D T +W+ CV TL GH V+ + +P G LLA+CS D + VW + + E
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW-DVGSG 324
+ L H V+ V W P S+ + LA+ S D T+KL+ + G
Sbjct: 142 CVSVLSSHTQDVKHVVWHP---SQEL---------------LASASYDDTVKLYQEEGDD 183
Query: 325 SLLF-TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
+ TL GH++ V + F P G+ L SC DD+T+R+W
Sbjct: 184 WVCCATLEGHESTVWSIAFDPSGQRLASCSDDRTVRIW 221
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 86/313 (27%), Positives = 145/313 (46%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEY--ERAL-HGHLDSVQDIAFDQSGKLLVSCSADM 170
++P +L+ASC D IR+W E + + L GH +V+ +A+ G L S S D
Sbjct: 24 WNPSGTLLASCGGDRKIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 171 SLKLW--DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV--ATGY-CV 225
+ +W + ++C+ T++GH++ V VA+ P+ + + + SRDK++ +WEV Y CV
Sbjct: 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143
Query: 226 KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWA 283
L+ H + V+ + P LLAS S D T +++ + A L GH+ TV +A+
Sbjct: 144 SVLSSHTQDVKHVVWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFD 203
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTF 342
P + + ++ + YL + D S + TL G H + V +
Sbjct: 204 P--SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP-SWKCICTLSGFHTRTIYDVAW 260
Query: 343 -HPGGKYLVSCGDDKTLRVW--DTANKRNMKTL-------EAHSHFVTSLDFHRAHPYVV 392
G +CGDD +RV+ D + T +AHS V + ++ P ++
Sbjct: 261 CQLTGALATACGDD-AIRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLL 319
Query: 393 TG-SVDKTVKVWE 404
S D V WE
Sbjct: 320 ASCSDDGEVAFWE 332
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 319 (117.4 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 94/334 (28%), Positives = 150/334 (44%)
Query: 85 AKRSPT----EWIPRAPEKF--ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG 138
AK++PT +W P P K +SGH V + P + S D TI++WD +G
Sbjct: 178 AKKAPTMPKPQWHP--PWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASG 235
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ + +L GH+ +V+ + L SC D +K WD+ + ++ GH V G+
Sbjct: 236 KLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDL 295
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P D +++ SRD T ++W+V T V TL+GH V ++ + + S+D T R+
Sbjct: 296 HPTLDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 355
Query: 259 WSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
W L +T+ L H +V V P + + A+GS D IK
Sbjct: 356 WDLVAGKTRVTLTNHKKSVRAVVLHPLLYT------------------FASGSPDN-IKQ 396
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
W G + L GH+ + + + G LVS D+ T+ +WD N + + A
Sbjct: 397 WKFPDGGFIQNLSGHNAIINTLAVNADG-VLVSGADNGTMHLWDWRTGYNFQRVHAAVQ- 454
Query: 379 VTSLD---------FHRAHPYVVTGSVDKTVKVW 403
SLD F R+ ++T DKT+KV+
Sbjct: 455 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 488
Score = 237 (88.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 73/287 (25%), Positives = 119/287 (41%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
R + GHL V+ IA + + V+ SAD ++K+WD+++ + ++ GH V GV
Sbjct: 197 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 256
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
S ++ S DK +K W++ ++ GH V + + P +L +CS D TAR+W +
Sbjct: 257 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDV 316
Query: 262 ATKETKAELRGHDH---TVECVAWAPGVASESIS--------------------EAAXXX 298
TK + L GH + TV C A P + + S + +
Sbjct: 317 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 376
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y IK W G + L GH+ + + + G LVS D+ T+
Sbjct: 377 VVLHPLLYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNADG-VLVSGADNGTM 435
Query: 359 RVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+WD + T +F R H V GS+D ++ C
Sbjct: 436 HLWD---------------WRTGYNFQRVHAAVQPGSLDSESGIFAC 467
Score = 208 (78.3 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ TGS D+TIK+WD+ SG L +L GH + VRGV YL SCG+DK ++ WD
Sbjct: 217 WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEY 276
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++ H V LD H +VT S D T ++W+ R
Sbjct: 277 NKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDSTARIWDVR 317
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 327 LFTLI-GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
L+ +I GH WVR + PG ++ V+ D+T+++WD A+ + +L H V +
Sbjct: 195 LYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 254
Query: 386 RAHPYVVTGSVDKTVKVWE 404
PY+ + DK VK W+
Sbjct: 255 TRSPYLFSCGEDKQVKCWD 273
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 319 (117.4 bits), Expect = 3.0e-28, P = 3.0e-28
Identities = 91/335 (27%), Positives = 151/335 (45%)
Query: 82 PTRAKRSPT-EWIPRAPEKF--ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG 138
P +A P +W P P K +SGH V + P + S D TI++WD +G
Sbjct: 183 PRKAPTMPKPQWHP--PWKLYRVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASG 240
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ + +L GH+ +V+ +A L SC D +K WD+ + ++ GH V +
Sbjct: 241 KLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDL 300
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV-SPDGTLLASCSNDHTAR 257
P D +++ SRD T ++W++ T V TL+GH V +K S + ++ S+D T R
Sbjct: 301 HPTIDVLVTCSRDATARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIR 360
Query: 258 VWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
+W L +T+A L H +V + P + A+GS D IK
Sbjct: 361 LWDLVAGKTRATLTNHKKSVRALVLHPRQYT------------------FASGSPDN-IK 401
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA--- 374
W G+ + L GH+ + + + G LVS D+ T+ +WD N + + A
Sbjct: 402 QWKFPDGNFIQNLSGHNAIINTLAVNSDG-VLVSGADNGTIHMWDWRTGYNFQRIHAAVQ 460
Query: 375 -----HSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ S F ++ ++T DKT+KV++
Sbjct: 461 PGSLDSESGIFSCVFDQSESRLITAEADKTIKVYK 495
Score = 238 (88.8 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 69/274 (25%), Positives = 118/274 (43%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
R + GHL V+ IA + + V+ SAD ++K+WD+++ + ++ GH V GVA
Sbjct: 202 RVISGHLGWVRSIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNR 261
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
S ++ S DK +K W++ ++ GH V + + P +L +CS D TARVW +
Sbjct: 262 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDI 321
Query: 262 ATKETKAELRGHDHTV---ECVAWAPGVASESISEAAXXXXXXXXXXYLAT-GSRDKTIK 317
TK L GH +TV +C + P V + + AT + K+++
Sbjct: 322 RTKANVHTLSGHTNTVATVKCQSAEPQVVTVGSHDTTIRLWDLVAGKTRATLTNHKKSVR 381
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ F DN ++ F P G ++ + + N + A +
Sbjct: 382 ALVLHPRQYTFASGSPDN-IKQWKF-PDGNFIQNLSGHNAIINTLAVNSDGVLVSGADNG 439
Query: 378 FV------TSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T +F R H V GS+D ++ C
Sbjct: 440 TIHMWDWRTGYNFQRIHAAVQPGSLDSESGIFSC 473
Score = 208 (78.3 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 41/101 (40%), Positives = 56/101 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ TGS D+TIK+WD+ SG L +L GH + VRGV YL SCG+DK ++ WD
Sbjct: 222 WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVAVSNRSPYLFSCGEDKQVKCWDLEY 281
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++ H V LD H +VT S D T +VW+ R
Sbjct: 282 NKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDATARVWDIR 322
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 257 (95.5 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 70/268 (26%), Positives = 130/268 (48%)
Query: 145 HGHLDSVQDIAFDQSG----KLLVSCSADMSLKLWDMST--YQCLKTMQGHDHNVTGVAF 198
H H D++ + + ++ +L++S S D +K+W S + T++GH V V
Sbjct: 13 HAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDV 72
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P+ + + S+S D I++W++ +G ++ + + SPD LA+ S+ +
Sbjct: 73 SPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNI 132
Query: 259 WSLAT--KETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTI 316
+ + T KE + RG + +A++P YLA+G+ D I
Sbjct: 133 FGVETGKKEYSLDTRGK--FILSIAYSPD------------------GKYLASGAIDGII 172
Query: 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS 376
++D+ +G LL TL GH +R +TF P + LV+ DD +++++ + TL H
Sbjct: 173 NIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHG 232
Query: 377 HFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+V ++ F + V+ S DK+VKVW+
Sbjct: 233 SWVLNVAFSPDDTHFVSSSSDKSVKVWD 260
Score = 225 (84.3 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 56/184 (30%), Positives = 97/184 (52%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFDQSG 160
L GH+ V+ V P ++MAS S DA IRLWD E+G+ RA+ G +D+ +AF
Sbjct: 60 LEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDA-WSVAFSPDS 118
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ L + S + ++ + T + ++ + +A+ P+ ++ S + D I ++++A
Sbjct: 119 QHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIA 178
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
TG + TL GH +R + SPD LL + S+D +++ + A L GH V V
Sbjct: 179 TGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNV 238
Query: 281 AWAP 284
A++P
Sbjct: 239 AFSP 242
Score = 223 (83.6 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 48/153 (31%), Positives = 82/153 (53%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P +A+ S + ++ ETG+ E +L + IA+ GK L S + D
Sbjct: 112 VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+ ++D++T + L T++GH + + F P+S +++AS D IK++EV TL+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + SPD T S S+D + +VW ++ +
Sbjct: 232 GSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSAR 264
Score = 220 (82.5 bits), Expect = 5.5e-17, P = 5.5e-17
Identities = 44/162 (27%), Positives = 86/162 (53%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++++ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 200 PDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVW 259
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V+ CV T H++ V +K + +G+ + S ++D V+
Sbjct: 260 DVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
Score = 177 (67.4 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 44/167 (26%), Positives = 81/167 (48%)
Query: 120 LMASCSEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177
L+ S S D +++W + E E + L GH V + SG ++ S S D ++LWD+
Sbjct: 34 LVISGSLDDLVKVWKWSDERLELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDL 93
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
+ + ++ + + VAF P+S + + S + ++ V TG +L +++
Sbjct: 94 ESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILS 153
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
I SPDG LAS + D ++ +AT + L GH + + ++P
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Score = 174 (66.3 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 35/117 (29%), Positives = 60/117 (51%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I++++ + L GH V ++AF
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDT 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+S C+ T H V GV + N ++S + D+ I +++
Sbjct: 246 HFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
Score = 156 (60.0 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 32/99 (32%), Positives = 54/99 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK+++V SL TL GH +WV V F P + VS DK+++VWD + +
Sbjct: 205 LVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSAR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + +++ +V+ + D+ + V++C
Sbjct: 265 TCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYDC 303
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 57/234 (24%), Positives = 102/234 (43%)
Query: 177 MST-YQCL-KTMQGHDHNVTGVAFLPNS----DFVLSASRDKTIKMWEVATGYCVKTLTG 230
MST Y L K H+ + V + NS + V+S S D +K+W+ + + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWK----WSDERL-- 54
Query: 231 HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASES 290
+++ + +G L S D + +A+ A +R D +E + +
Sbjct: 55 ------ELQSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWD--LESGKQIRAIDAGP 106
Query: 291 ISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV 350
+ A +LATGS + ++ V +G ++L ++ + + P GKYL
Sbjct: 107 VD--AWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 351 SCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
S D + ++D A + + TLE H+ + SL F +VT S D +K++E
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYE 218
Score = 112 (44.5 bits), Expect = 3.3e-28, Sum P(2) = 3.3e-28
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDV + + + T + H + V GV ++ G +VS DD+ + V+D
Sbjct: 246 HFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 318 (117.0 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 94/334 (28%), Positives = 148/334 (44%)
Query: 85 AKRSPT----EWIPRAPEKF--ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG 138
AK++PT +W P P K +SGH V + P + S D TI++WD +G
Sbjct: 179 AKKAPTMPKPQWHP--PWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASG 236
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ + +L GH+ +V+ + L SC D +K WD+ + ++ GH V G+
Sbjct: 237 KLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDL 296
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P D +++ SRD T ++W+V T V TL+GH V ++ + + S+D T R+
Sbjct: 297 HPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRL 356
Query: 259 WSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
W L +T+ L H +V V P A+GS D IK
Sbjct: 357 WDLVAGKTRVTLTNHKKSVRAVVLHP------------------LHYTFASGSPDN-IKQ 397
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
W G + L GH+ + + + G LVS D+ T+ +WD N + + A
Sbjct: 398 WKFPDGGFIQNLSGHNAIINTLAVNTDG-VLVSGADNGTMHLWDWRTGYNFQRVHAAVQ- 455
Query: 379 VTSLD---------FHRAHPYVVTGSVDKTVKVW 403
SLD F R+ ++T DKT+KV+
Sbjct: 456 PGSLDSESGIFACAFDRSESRLLTAEADKTIKVY 489
Score = 237 (88.5 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 73/287 (25%), Positives = 119/287 (41%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
R + GHL V+ IA + + V+ SAD ++K+WD+++ + ++ GH V GV
Sbjct: 198 RVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTR 257
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
S ++ S DK +K W++ ++ GH V + + P +L +CS D TAR+W +
Sbjct: 258 SPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDV 317
Query: 262 ATKETKAELRGHDH---TVECVAWAPGVASESIS--------------------EAAXXX 298
TK + L GH + TV C A P + + S + +
Sbjct: 318 RTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRA 377
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y IK W G + L GH+ + + + G LVS D+ T+
Sbjct: 378 VVLHPLHYTFASGSPDNIKQWKFPDGGFIQNLSGHNAIINTLAVNTDG-VLVSGADNGTM 436
Query: 359 RVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+WD + T +F R H V GS+D ++ C
Sbjct: 437 HLWD---------------WRTGYNFQRVHAAVQPGSLDSESGIFAC 468
Score = 208 (78.3 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 40/101 (39%), Positives = 56/101 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ TGS D+TIK+WD+ SG L +L GH + VRGV YL SCG+DK ++ WD
Sbjct: 218 WFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEY 277
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++ H V LD H +VT S D T ++W+ R
Sbjct: 278 NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVR 318
Score = 126 (49.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 327 LFTLI-GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
L+ +I GH WVR + PG ++ V+ D+T+++WD A+ + +L H V +
Sbjct: 196 LYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS 255
Query: 386 RAHPYVVTGSVDKTVKVWE 404
PY+ + DK VK W+
Sbjct: 256 TRSPYLFSCGEDKQVKCWD 274
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 285 (105.4 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 57/181 (31%), Positives = 94/181 (51%)
Query: 105 HRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
H S V ++ L+A+ +D + LW +L GH V+ + + +L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
V+ S S+++WD+ + L+T+ GH N+ + F P +FV S S+D IK+W++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV GH + VR ++ SPDG LAS ++DHT ++W L + +E GH V V +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 284 P 284
P
Sbjct: 199 P 199
Score = 268 (99.4 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 58/188 (30%), Positives = 97/188 (51%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L+GH SPV V + L+ + S+ +IR+WD E + R L GH ++ + F G
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S S D ++KLWD+ C+ +GH V + F P+ ++ SA+ D T+K+W++
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
G + GH V ++ P+ LLAS S+D T R W L + + + G V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYA 237
Query: 281 -AWAPGVA 287
+W G++
Sbjct: 238 GSWVVGLS 245
Score = 192 (72.6 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 35/99 (35%), Positives = 56/99 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+GS+D IKLWD+ +F GH VR + F P GK+L S DD T+++WD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ M H+ V ++FH + +GS D+T++ W+
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 166 (63.5 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATG D + LW + + + +L GH + V V + + +V+ ++RVWD
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL H + SLDFH +V +GS D +K+W+ R
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Score = 154 (59.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ GS+ +I++WD+ + +L TL+GH + + FHP G+++ S D +++WD K
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ HS V L F ++ + + D TVK+W+
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/89 (30%), Positives = 45/89 (50%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F GH V + F P +AS ++D T++LWD G+ GH V + F +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQG 188
LL S S+D +++ WD+ +Q + ++G
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEG 229
Score = 58 (25.5 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR 338
LA+GS D+TI+ WD+ ++ + G VR
Sbjct: 204 LASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 283 (104.7 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 64/182 (35%), Positives = 102/182 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH S V + H + S S DAT+R+WD ETG+ L GH+ +V+ + +D G+
Sbjct: 337 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GR 392
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS + D +K+WD T CL T+QGH + V + F + V+S S D +I++W+V T
Sbjct: 393 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 450
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG---HDHTVE 278
G C+ TLTGH+ +++ + +L S + D T ++W + T + L+G H V
Sbjct: 451 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 508
Query: 279 CV 280
C+
Sbjct: 509 CL 510
Score = 219 (82.2 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 53/155 (34%), Positives = 84/155 (54%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+++ S S D T+++W+ ETGE L+GH +V+ + + K +VS S D +L++WD+
Sbjct: 312 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 369
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QCL + GH V V + + V+S + D +K+W+ T C+ TL GH V +
Sbjct: 370 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 427
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ DG + S S D + RVW + T L GH
Sbjct: 428 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 460
Score = 219 (82.2 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 175 WDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + K ++GHD H +T + F N ++S S D T+K+W TG C++TL GH
Sbjct: 245 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 302
Query: 234 --WVRQ------IKVSPDGTL------LASCSND---HTARVWSLATKETKAELRGHDHT 276
W Q I S D TL C + HT+ V + E + D T
Sbjct: 303 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 362
Query: 277 VECVAWAPGVASESI-SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ G + A + +G+ D +K+WD + + L TL GH N
Sbjct: 363 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 422
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V + F G ++VS D ++RVWD + TL H + ++ +V+G+
Sbjct: 423 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 478
Query: 396 VDKTVKVWECR 406
D TVK+W+ +
Sbjct: 479 ADSTVKIWDIK 489
Score = 216 (81.1 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 47/148 (31%), Positives = 82/148 (55%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S + D +++WD ET L GH + V + FD G +VS S D S+++WD+ T
Sbjct: 394 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETG 451
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG---HREWVRQ 237
C+ T+ GH +G+ N ++S + D T+K+W++ TG C++TL G H+ V
Sbjct: 452 NCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 509
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKE 265
++ + + + + S+D T ++W L T E
Sbjct: 510 LQFNKN--FVITSSDDGTVKLWDLKTGE 535
Score = 212 (79.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 49/139 (35%), Positives = 78/139 (56%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P L GH + V + F + + S S D +IR+WD ETG L GH S
Sbjct: 406 WDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGH-QS 462
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDFVLSAS 209
+ + +LVS +AD ++K+WD+ T QCL+T+QG + + + V L N +FV+++S
Sbjct: 463 LTS-GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 521
Query: 210 RDKTIKMWEVATGYCVKTL 228
D T+K+W++ TG ++ L
Sbjct: 522 DDGTVKLWDLKTGEFIRNL 540
Score = 207 (77.9 bits), Expect = 8.1e-14, P = 8.1e-14
Identities = 76/260 (29%), Positives = 113/260 (43%)
Query: 134 DYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
++ GE + + L GH D V G +VS S D +LK+W T +CL+T+ GH
Sbjct: 244 NWRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 302
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V N ++S S D+T+K+W TG C+ TL GH VR + + + S S
Sbjct: 303 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGS 358
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT-- 309
D T RVW + T + L GH V CV + + L T
Sbjct: 359 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 418
Query: 310 GSRDKTIKL-WD---VGSGSLLFTLIGHD----NWVRGVTFHPG---G-----KYLVSCG 353
G ++ L +D V SGSL ++ D N + +T H G LVS
Sbjct: 419 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 478
Query: 354 DDKTLRVWDTANKRNMKTLE 373
D T+++WD + ++TL+
Sbjct: 479 ADSTVKIWDIKTGQCLQTLQ 498
Score = 60 (26.2 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLI 331
++ T S D T+KLWD+ +G + L+
Sbjct: 516 FVITSSDDGTVKLWDLKTGEFIRNLV 541
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 82/268 (30%), Positives = 132/268 (49%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
A+SGH V++ F P S + +CS D T+ WD TG+ +R GH + V + + G
Sbjct: 93 AMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRG 152
Query: 161 K-LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
+ LL S S D ++K+WD T++ VT V F + V+S D +K+W++
Sbjct: 153 QQLLCSGSDDRTIKIWDARKKHAAHTLES-PFQVTAVCFGDTGEQVISGGIDNEVKIWDI 211
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-RGHDH 275
+ L GH + + + +SP+G + + + D+T RVW + A E ++ +GH H
Sbjct: 212 RKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQH 271
Query: 276 TVE-----CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
E C AW+PG S+ I+ +GS D+ + +WDV + +L+ L
Sbjct: 272 NFEKNLLRC-AWSPG--SDKIT----------------SGSADRHVYIWDVNTRRILYKL 312
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
GH+ V V F P ++S DKTL
Sbjct: 313 PGHNGSVNAVDFSPKEPLILSGSSDKTL 340
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 79/305 (25%), Positives = 132/305 (43%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAFDQSG 160
L GH + FHP L+ S D I +W YE E A+ GH +V + F G
Sbjct: 51 LEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDG 110
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDKTIKMWEV 219
+ +CS D +L WD++T Q + +GH + V V +L S S D+TIK+W+
Sbjct: 111 SHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDA 170
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ TL + V + G + S D+ ++W + + LRGH T+
Sbjct: 171 RKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITG 229
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339
++ +P ++ A A G R +K++ + N +R
Sbjct: 230 MSLSPE-GDFILTNAMDNTLRVWDVRPYAPGER--CVKVFQGHQHNF------EKNLLR- 279
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ PG + S D+ + +WD +R + L H+ V ++DF P +++GS DKT
Sbjct: 280 CAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKT 339
Query: 400 VKVWE 404
+ + E
Sbjct: 340 LYLGE 344
Score = 167 (63.8 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 35/102 (34%), Positives = 55/102 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG-DDKTLRVWDTA 364
++ T S DKT+ WD+ +G GH N+V V G+ L+ G DD+T+++WD
Sbjct: 112 HIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR 171
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K TLE+ VT++ F V++G +D VK+W+ R
Sbjct: 172 KKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIR 212
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 32/102 (31%), Positives = 52/102 (50%)
Query: 307 LATGSRDKTIKLWDVGSG-SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
L++G D+ I +W V + + GH V F P G ++ +C DKTL WD A
Sbjct: 71 LSSGF-DRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIAT 129
Query: 366 KRNMKTLEAHSHFVTSLD-FHRAHPYVVTGSVDKTVKVWECR 406
+ + + H +FV S+ R + +GS D+T+K+W+ R
Sbjct: 130 GQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDAR 171
Score = 146 (56.5 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS D+TIK+WD TL V V F G+ ++S G D +++WD +
Sbjct: 156 LCSGSDDRTIKIWDARKKHAAHTLESPFQ-VTAVCFGDTGEQVISGGIDNEVKIWDIRKQ 214
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ L HS +T + +++T ++D T++VW+ R
Sbjct: 215 AVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVR 254
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 36/126 (28%), Positives = 60/126 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWD---YETGEY-ERALHGHLDSVQD---- 153
L GH + + P + + + D T+R+WD Y GE + GH + +
Sbjct: 220 LRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLR 279
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
A+ + S SAD + +WD++T + L + GH+ +V V F P +LS S DKT
Sbjct: 280 CAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKT 339
Query: 214 IKMWEV 219
+ + E+
Sbjct: 340 LYLGEI 345
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 283 (104.7 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 64/182 (35%), Positives = 102/182 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH S V + H + S S DAT+R+WD ETG+ L GH+ +V+ + +D G+
Sbjct: 379 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GR 434
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS + D +K+WD T CL T+QGH + V + F + V+S S D +I++W+V T
Sbjct: 435 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 492
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG---HDHTVE 278
G C+ TLTGH+ +++ + +L S + D T ++W + T + L+G H V
Sbjct: 493 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT 550
Query: 279 CV 280
C+
Sbjct: 551 CL 552
Score = 219 (82.2 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 53/155 (34%), Positives = 84/155 (54%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+++ S S D T+++W+ ETGE L+GH +V+ + + K +VS S D +L++WD+
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 411
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QCL + GH V V + + V+S + D +K+W+ T C+ TL GH V +
Sbjct: 412 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ DG + S S D + RVW + T L GH
Sbjct: 470 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
Score = 219 (82.2 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 175 WDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + K ++GHD H +T + F N ++S S D T+K+W TG C++TL GH
Sbjct: 287 WRRGELRSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 234 --WVRQ------IKVSPDGTL------LASCSND---HTARVWSLATKETKAELRGHDHT 276
W Q I S D TL C + HT+ V + E + D T
Sbjct: 345 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 404
Query: 277 VECVAWAPGVASESI-SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ G + A + +G+ D +K+WD + + L TL GH N
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 464
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V + F G ++VS D ++RVWD + TL H + ++ +V+G+
Sbjct: 465 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 520
Query: 396 VDKTVKVWECR 406
D TVK+W+ +
Sbjct: 521 ADSTVKIWDIK 531
Score = 216 (81.1 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 47/148 (31%), Positives = 82/148 (55%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S + D +++WD ET L GH + V + FD G +VS S D S+++WD+ T
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETG 493
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG---HREWVRQ 237
C+ T+ GH +G+ N ++S + D T+K+W++ TG C++TL G H+ V
Sbjct: 494 NCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTC 551
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKE 265
++ + + + + S+D T ++W L T E
Sbjct: 552 LQFNKN--FVITSSDDGTVKLWDLKTGE 577
Score = 211 (79.3 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 49/139 (35%), Positives = 77/139 (55%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P L GH + V + F + + S S D +IR+WD ETG L GH S
Sbjct: 448 WDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGH-QS 504
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDFVLSAS 209
+ + +LVS +AD ++K+WD+ T QCL+T+QG + + V L N +FV+++S
Sbjct: 505 LTS-GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSS 563
Query: 210 RDKTIKMWEVATGYCVKTL 228
D T+K+W++ TG ++ L
Sbjct: 564 DDGTVKLWDLKTGEFIRNL 582
Score = 208 (78.3 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 77/263 (29%), Positives = 113/263 (42%)
Query: 134 DYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
++ GE + L GH D V G +VS S D +LK+W T +CL+T+ GH
Sbjct: 286 NWRRGELRSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V N ++S S D+T+K+W TG C+ TL GH VR + + + S S
Sbjct: 345 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGS 400
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT-- 309
D T RVW + T + L GH V CV + + L T
Sbjct: 401 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Query: 310 GSRDKTIKL-WD---VGSGSLLFTLIGHD----NWVRGVTFHPG---G-----KYLVSCG 353
G ++ L +D V SGSL ++ D N + +T H G LVS
Sbjct: 461 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 520
Query: 354 DDKTLRVWDTANKRNMKTLEAHS 376
D T+++WD + ++TL+ S
Sbjct: 521 ADSTVKIWDIKTGQCLQTLQGPS 543
Score = 60 (26.2 bits), Expect = 5.0e-28, Sum P(2) = 5.0e-28
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLI 331
++ T S D T+KLWD+ +G + L+
Sbjct: 558 FVITSSDDGTVKLWDLKTGEFIRNLV 583
>TAIR|locus:2050064 [details] [associations]
symbol:AT2G21390 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0006886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC006841 GO:GO:0030126 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 ProtClustDB:CLSN2914500
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AK228692 IPI:IPI00534598
PIR:F84600 RefSeq:NP_179734.1 UniGene:At.28070
ProteinModelPortal:Q9SJT9 SMR:Q9SJT9 STRING:Q9SJT9 PaxDb:Q9SJT9
PRIDE:Q9SJT9 EnsemblPlants:AT2G21390.1 GeneID:816678
KEGG:ath:AT2G21390 GeneFarm:3755 TAIR:At2g21390 InParanoid:Q9SJT9
OMA:GMENTDI PhylomeDB:Q9SJT9 Genevestigator:Q9SJT9 Uniprot:Q9SJT9
Length = 1218
Score = 314 (115.6 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 83/292 (28%), Positives = 127/292 (43%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
KF +R V + FHP + + I+LWDY G H V+ + F
Sbjct: 4 KFETKSNR--VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHN 61
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
S L VS D +K+W+ T++CL T+ GH + V F + +++SAS D+TI++W
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAE-----LRG 272
+ C+ LTGH +V P L+ S S D T RVW + A K+ A +R
Sbjct: 122 WQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMRF 181
Query: 273 HDHTVECVAWAPGVAS---ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL--L 327
+ + E + +G+ D+ +KLW + +
Sbjct: 182 SQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
Query: 328 FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA-HSHF 378
TL GH N V V FH +VS +DK++RVWD + ++T H F
Sbjct: 242 DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRF 293
Score = 271 (100.5 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 66/245 (26%), Positives = 116/245 (47%)
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
++LWD + H+ V GV F + +S D IK+W T C+ TL GH
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGH 92
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VAS 288
+++R ++ + + S S+D T R+W+ ++ + L GH+H V C ++ P V S
Sbjct: 93 LDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVS 152
Query: 289 ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGS---GSL----LFTLIGHDNWVRGVT 341
S+ + A+ + D ++ + S G + + L GHD V +
Sbjct: 153 ASLDQTVRVWDIGALKKKSASPA-DDLMRFSQMNSDLFGGVDAIVKYVLEGHDRGVNWAS 211
Query: 342 FHPGGKYLVSCGDDKTLRVWDTANKR--NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
FHP +VS DD+ +++W + + TL H + V+S+ FH +V+ S DK+
Sbjct: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKS 271
Query: 400 VKVWE 404
++VW+
Sbjct: 272 IRVWD 276
Score = 143 (55.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V +F + L+VS + D +KLW M+ + + T++GH +NV+ V F
Sbjct: 200 LEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTG-H-REWVRQIKVSPDGTLLASCSNDHTARVW 259
D ++S S DK+I++W+ ++T H R W+ + V P+ LLA+ +D+ V+
Sbjct: 260 QDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWI--LAVHPEINLLAA-GHDNGMIVF 316
Query: 260 SLATKETKAELRG 272
L + L G
Sbjct: 317 KLERERPAFALSG 329
Score = 40 (19.1 bits), Expect = 5.2e-28, Sum P(2) = 5.2e-28
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 369 MKTLEAHSHFVTSLDFHRAHPYVVTGS 395
M+ E + T+L++ +P+V+ GS
Sbjct: 1139 MQAAERNMTDATTLNYDFRNPFVICGS 1165
Score = 38 (18.4 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 390 YVVTGSVDKTVKV 402
Y++TG++DK K+
Sbjct: 709 YLITGNLDKLSKL 721
Score = 38 (18.4 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 306 YLATGSRDKTIKLWDV 321
YL TG+ DK KL +
Sbjct: 709 YLITGNLDKLSKLMKI 724
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 315 (115.9 bits), Expect = 5.4e-28, P = 5.4e-28
Identities = 97/313 (30%), Positives = 143/313 (45%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH VI V F P +AS S D T+R WD T GH V I++ G
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 161 KLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLP---NSD--FVLSASRDKTI 214
K L S + + LWD ST Q +T+ GH +TG+++ P N + +V S+S+D ++
Sbjct: 169 KKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 228
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W+ G C + LTGH + V ++ DG LL S S D T +VW L+GH
Sbjct: 229 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 275 HTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
H V +A + A + A GS K +K + S
Sbjct: 288 HWVNTMALSTDYA---LRTGAFEPAEATVNAQDLQGSL-KELK--ERASSRY-------- 333
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSLDFHRAHPYVVT 393
N VRG G + LVS DD TL +W A +K+ + + H + + F V +
Sbjct: 334 NLVRG----QGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVAS 389
Query: 394 GSVDKTVKVWECR 406
S DK++K+W+ R
Sbjct: 390 ASFDKSIKLWDGR 402
Score = 276 (102.2 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 83/315 (26%), Positives = 140/315 (44%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFDQ 158
F GHR V+ + + P +AS ++ + LWD TG + R L GH + ++++
Sbjct: 150 FTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEP 209
Query: 159 -----SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDK 212
+ + S S D S+++WD + +C + + GH +VT + + D +L SAS+D+
Sbjct: 210 LHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW--GGDGLLYSASQDR 267
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
TIK+W G +TL GH WV + +S D L A V + + + EL+
Sbjct: 268 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELK- 326
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLI 331
+ G E L +GS D T+ LW L +
Sbjct: 327 -ERASSRYNLVRGQGPER----------------LVSGSDDFTLFLWSPAEDKKPLARMT 369
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
GH + V F P + + S DK++++WD + + +L H V + + +
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 392 VTGSVDKTVKVWECR 406
V+GS D T+KVW+ +
Sbjct: 430 VSGSSDSTLKVWDVK 444
Score = 244 (91.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 60/204 (29%), Positives = 97/204 (47%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C +++GH V VAF P ++ S S D T++ W+++T T GHR WV I
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 241 SPDGTLLAS-CSNDHTARVWSLATK-ETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
SPDG LAS C N +W +T + L GH + ++W P +
Sbjct: 165 SPDGKKLASGCKNGQVL-LWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECR------ 217
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y+A+ S+D ++++WD +G L GH V + + G L S D+T+
Sbjct: 218 -------YVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTI 269
Query: 359 RVWDTANKRNMKTLEAHSHFVTSL 382
+VW + +TL+ H H+V ++
Sbjct: 270 KVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 226 (84.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 46/128 (35%), Positives = 76/128 (59%)
Query: 92 WIPRAPEK-FA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P +K A ++GH++ + +V+F P ++AS S D +I+LWD TG+Y +L GH+
Sbjct: 356 WSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA+ +LLVS S+D +LK+WD+ + + GH V V + P+ V S
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGG 475
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 476 KDKCLRIW 483
Score = 218 (81.8 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSE--DATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
L GH V + ++L E +AT+ D + G + L S ++ Q
Sbjct: 283 LQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQ-GSLKE-LKERASSRYNLVRGQG 340
Query: 160 GKLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ LVS S D +L LW + + L M GH + V F P+S V SAS DK+IK+W+
Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 400
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVE 278
TG + +L GH V QI S D LL S S+D T +VW + ++ +L GH V
Sbjct: 401 GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVY 460
Query: 279 CVAWAP 284
V W+P
Sbjct: 461 AVDWSP 466
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 121 MASCSEDATIRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D T+ LW + A + GH + + F +++ S S D S+KLWD T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L +++GH V +A+ +S ++S S D T+K+W+V L GH + V +
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVD 463
Query: 240 VSPDGTLLASCSNDHTARVW 259
SPDG +AS D R+W
Sbjct: 464 WSPDGQRVASGGKDKCLRIW 483
Score = 148 (57.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+IKLWD +G L +L GH V + + + LVS D TL+VWD +
Sbjct: 387 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H+ V ++D+ V +G DK +++W
Sbjct: 447 KLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 37 (18.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 262 ATKETKAELRGHDHTVECVAWAP 284
A + L GH V VA++P
Sbjct: 102 AVTRCTSSLEGHSEAVISVAFSP 124
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 315 (115.9 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 97/313 (30%), Positives = 143/313 (45%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH VI V F P +AS S D T+R WD T GH V I++ G
Sbjct: 111 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 170
Query: 161 KLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLP---NSD--FVLSASRDKTI 214
K L S + + LWD ST Q +T+ GH +TG+++ P N + +V S+S+D ++
Sbjct: 171 KKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSV 230
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W+ G C + LTGH + V ++ DG LL S S D T +VW L+GH
Sbjct: 231 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHG 289
Query: 275 HTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
H V +A + A + A GS K +K + S
Sbjct: 290 HWVNTMALSTDYA---LRTGAFEPAEATVNAQDLQGSL-KELK--ERASSRY-------- 335
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSLDFHRAHPYVVT 393
N VRG G + LVS DD TL +W A +K+ + + H + + F V +
Sbjct: 336 NLVRG----QGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVAS 391
Query: 394 GSVDKTVKVWECR 406
S DK++K+W+ R
Sbjct: 392 ASFDKSIKLWDGR 404
Score = 277 (102.6 bits), Expect = 8.7e-23, P = 8.7e-23
Identities = 84/315 (26%), Positives = 140/315 (44%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFDQ 158
F GHR V+ + + P +AS ++ I LWD TG + R L GH + ++++
Sbjct: 152 FTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEP 211
Query: 159 -----SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDK 212
+ + S S D S+++WD + +C + + GH +VT + + D +L SAS+D+
Sbjct: 212 LHMNPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW--GGDGLLYSASQDR 269
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
TIK+W G +TL GH WV + +S D L A V + + + EL+
Sbjct: 270 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQGSLKELK- 328
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLI 331
+ G E L +GS D T+ LW L +
Sbjct: 329 -ERASSRYNLVRGQGPER----------------LVSGSDDFTLFLWSPAEDKKPLARMT 371
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
GH + V F P + + S DK++++WD + + +L H V + + +
Sbjct: 372 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 431
Query: 392 VTGSVDKTVKVWECR 406
V+GS D T+KVW+ +
Sbjct: 432 VSGSSDSTLKVWDVK 446
Score = 244 (91.0 bits), Expect = 2.5e-18, P = 2.5e-18
Identities = 60/204 (29%), Positives = 97/204 (47%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C +++GH V VAF P ++ S S D T++ W+++T T GHR WV I
Sbjct: 107 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 166
Query: 241 SPDGTLLAS-CSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
SPDG LAS C N +W +T + L GH + ++W P +
Sbjct: 167 SPDGKKLASGCKNGQIL-LWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECR------ 219
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y+A+ S+D ++++WD +G L GH V + + G L S D+T+
Sbjct: 220 -------YVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTI 271
Query: 359 RVWDTANKRNMKTLEAHSHFVTSL 382
+VW + +TL+ H H+V ++
Sbjct: 272 KVWRAHDGVLCRTLQGHGHWVNTM 295
Score = 226 (84.6 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 46/128 (35%), Positives = 76/128 (59%)
Query: 92 WIPRAPEK-FA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P +K A ++GH++ + +V+F P ++AS S D +I+LWD TG+Y +L GH+
Sbjct: 358 WSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA 417
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA+ +LLVS S+D +LK+WD+ + + GH V V + P+ V S
Sbjct: 418 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGG 477
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 478 KDKCLRIW 485
Score = 218 (81.8 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 63/186 (33%), Positives = 90/186 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSE--DATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
L GH V + ++L E +AT+ D + G + L S ++ Q
Sbjct: 285 LQGHGHWVNTMALSTDYALRTGAFEPAEATVNAQDLQ-GSLKE-LKERASSRYNLVRGQG 342
Query: 160 GKLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ LVS S D +L LW + + L M GH + V F P+S V SAS DK+IK+W+
Sbjct: 343 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWD 402
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVE 278
TG + +L GH V QI S D LL S S+D T +VW + ++ +L GH V
Sbjct: 403 GRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVY 462
Query: 279 CVAWAP 284
V W+P
Sbjct: 463 AVDWSP 468
Score = 202 (76.2 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 121 MASCSEDATIRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D T+ LW + A + GH + + F +++ S S D S+KLWD T
Sbjct: 346 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 405
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L +++GH V +A+ +S ++S S D T+K+W+V L GH + V +
Sbjct: 406 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVD 465
Query: 240 VSPDGTLLASCSNDHTARVW 259
SPDG +AS D R+W
Sbjct: 466 WSPDGQRVASGGKDKCLRIW 485
Score = 148 (57.2 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+IKLWD +G L +L GH V + + + LVS D TL+VWD +
Sbjct: 389 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 448
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H+ V ++D+ V +G DK +++W
Sbjct: 449 KLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 37 (18.1 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 262 ATKETKAELRGHDHTVECVAWAP 284
A + L GH V VA++P
Sbjct: 104 AVTRCTSSLEGHSEAVISVAFSP 126
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 273 (101.2 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 66/196 (33%), Positives = 100/196 (51%)
Query: 90 TEW-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHL 148
T W R K GH + V+ + F +++A+ S D TI++WD ETGE R L GH
Sbjct: 333 TNWKYGRCSIK-TFKGHTNGVMCLQFED--NILATGSYDTTIKIWDTETGEELRTLRGHE 389
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
++ + FD + L+S S D ++K+W+ T +C+ T GH V G+ F ++ + S
Sbjct: 390 SGIRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF--DASILASG 445
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
S DKT+K+W +L GH +WV ++V + S S+D T R+W L TK
Sbjct: 446 SVDKTVKIWNFEDKSTF-SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIR 504
Query: 269 ELRGHDHTVECVAWAP 284
GH V+ V P
Sbjct: 505 TFHGHVGQVQQVVPLP 520
Score = 258 (95.9 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 91/326 (27%), Positives = 143/326 (43%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W E+ L GH S + + F + + S S D TI++W++ TGE GH
Sbjct: 374 WDTETGEELRTLRGHESGIRCLQFDD--TKLISGSMDRTIKVWNWRTGECISTYTGHRGG 431
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLW---DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
V + FD S +L S S D ++K+W D ST+ +++GH V V +S V S
Sbjct: 432 VIGLHFDAS--ILASGSVDKTVKIWNFEDKSTF----SLRGHTDWVNAVRVDTSSRTVFS 485
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL----ASCSNDHTARVWSLAT 263
AS D T+++W++ T C++T GH V+Q+ P A C ND L+T
Sbjct: 486 ASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPREFEFEEHDAECEND------DLST 539
Query: 264 KETKAELRGHDHTVEC-VAWAPGVASESISEAAXXXXXXXXX--XYLATGSRDKTIKLWD 320
A+ +++ + P A S Y+ T + D TI+LW+
Sbjct: 540 TSGDAD----PPSIQASMGLEPNAAYSQSSAFGTSFDNGRAAPPRYMVTSALDSTIRLWE 595
Query: 321 VGSGSLLFTLIGHDN--WVRGV-TFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+G L T GH W G T +VS +D+ +++WD + +T HS
Sbjct: 596 TTTGRCLRTFFGHLEGVWALGADTLR-----IVSGAEDRMIKIWDPRTGKCERTFTGHSG 650
Query: 378 FVTSLDFHRAHPYVVTGSVDKTVKVW 403
VT + + TGS D V+++
Sbjct: 651 PVTCIGLGDSR--FATGSEDCEVRMY 674
Score = 168 (64.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 39/97 (40%), Positives = 55/97 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATGS D TIK+WD +G L TL GH++ +R + F L+S D+T++VW+
Sbjct: 362 LATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQFDD--TKLISGSMDRTIKVWNWRTG 419
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ T H V L F + + +GSVDKTVK+W
Sbjct: 420 ECISTYTGHRGGVIGLHFDAS--ILASGSVDKTVKIW 454
Score = 134 (52.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS D+TIK+W+ +G + T GH V G+ F L S DKT+++W+ +K
Sbjct: 402 LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFD--ASILASGSVDKTVKIWNFEDK 459
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+L H+ +V ++ + V + S D TV++W+
Sbjct: 460 STF-SLRGHTDWVNAVRVDTSSRTVFSASDDCTVRLWD 496
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 28/89 (31%), Positives = 45/89 (50%)
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDTANKRNMKTLEAHSH 377
W G S+ T GH N V + F +++ G D T+++WDT ++TL H
Sbjct: 335 WKYGRCSIK-TFKGHTNGVMCLQFEDN---ILATGSYDTTIKIWDTETGEELRTLRGHES 390
Query: 378 FVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ L F +++GS+D+T+KVW R
Sbjct: 391 GIRCLQFDDTK--LISGSMDRTIKVWNWR 417
Score = 93 (37.8 bits), Expect = 7.0e-28, Sum P(2) = 7.0e-28
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 347 KYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+Y+V+ D T+R+W+T R ++T H V +L +V+G+ D+ +K+W+ R
Sbjct: 580 RYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTLR--IVSGAEDRMIKIWDPR 637
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 283 (104.7 bits), Expect = 7.1e-28, Sum P(2) = 7.1e-28
Identities = 64/182 (35%), Positives = 102/182 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH S V + H + S S DAT+R+WD ETG+ L GH+ +V+ + +D G+
Sbjct: 377 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GR 432
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS + D +K+WD T CL T+QGH + V + F + V+S S D +I++W+V T
Sbjct: 433 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 490
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG---HDHTVE 278
G C+ TLTGH+ +++ + +L S + D T ++W + T + L+G H V
Sbjct: 491 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 548
Query: 279 CV 280
C+
Sbjct: 549 CL 550
Score = 219 (82.2 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 53/155 (34%), Positives = 84/155 (54%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+++ S S D T+++W+ ETGE L+GH +V+ + + K +VS S D +L++WD+
Sbjct: 352 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 409
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QCL + GH V V + + V+S + D +K+W+ T C+ TL GH V +
Sbjct: 410 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 467
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ DG + S S D + RVW + T L GH
Sbjct: 468 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 500
Score = 219 (82.2 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 175 WDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + K ++GHD H +T + F N ++S S D T+K+W TG C++TL GH
Sbjct: 285 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 342
Query: 234 --WVRQ------IKVSPDGTL------LASCSND---HTARVWSLATKETKAELRGHDHT 276
W Q I S D TL C + HT+ V + E + D T
Sbjct: 343 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 402
Query: 277 VECVAWAPGVASESI-SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ G + A + +G+ D +K+WD + + L TL GH N
Sbjct: 403 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 462
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V + F G ++VS D ++RVWD + TL H + ++ +V+G+
Sbjct: 463 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 518
Query: 396 VDKTVKVWECR 406
D TVK+W+ +
Sbjct: 519 ADSTVKIWDIK 529
Score = 216 (81.1 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 47/148 (31%), Positives = 82/148 (55%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S + D +++WD ET L GH + V + FD G +VS S D S+++WD+ T
Sbjct: 434 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETG 491
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG---HREWVRQ 237
C+ T+ GH +G+ N ++S + D T+K+W++ TG C++TL G H+ V
Sbjct: 492 NCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 549
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKE 265
++ + + + + S+D T ++W L T E
Sbjct: 550 LQFNKN--FVITSSDDGTVKLWDLKTGE 575
Score = 212 (79.7 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 49/139 (35%), Positives = 78/139 (56%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P L GH + V + F + + S S D +IR+WD ETG L GH S
Sbjct: 446 WDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGH-QS 502
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDFVLSAS 209
+ + +LVS +AD ++K+WD+ T QCL+T+QG + + + V L N +FV+++S
Sbjct: 503 LTS-GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 561
Query: 210 RDKTIKMWEVATGYCVKTL 228
D T+K+W++ TG ++ L
Sbjct: 562 DDGTVKLWDLKTGEFIRNL 580
Score = 207 (77.9 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 76/260 (29%), Positives = 113/260 (43%)
Query: 134 DYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
++ GE + + L GH D V G +VS S D +LK+W T +CL+T+ GH
Sbjct: 284 NWRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 342
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V N ++S S D+T+K+W TG C+ TL GH VR + + + S S
Sbjct: 343 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGS 398
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT-- 309
D T RVW + T + L GH V CV + + L T
Sbjct: 399 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 458
Query: 310 GSRDKTIKL-WD---VGSGSLLFTLIGHD----NWVRGVTFHPG---G-----KYLVSCG 353
G ++ L +D V SGSL ++ D N + +T H G LVS
Sbjct: 459 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 518
Query: 354 DDKTLRVWDTANKRNMKTLE 373
D T+++WD + ++TL+
Sbjct: 519 ADSTVKIWDIKTGQCLQTLQ 538
Score = 60 (26.2 bits), Expect = 7.1e-28, Sum P(2) = 7.1e-28
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLI 331
++ T S D T+KLWD+ +G + L+
Sbjct: 556 FVITSSDDGTVKLWDLKTGEFIRNLV 581
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 283 (104.7 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 64/182 (35%), Positives = 102/182 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH S V + H + S S DAT+R+WD ETG+ L GH+ +V+ + +D G+
Sbjct: 379 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GR 434
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS + D +K+WD T CL T+QGH + V + F + V+S S D +I++W+V T
Sbjct: 435 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 492
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG---HDHTVE 278
G C+ TLTGH+ +++ + +L S + D T ++W + T + L+G H V
Sbjct: 493 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVT 550
Query: 279 CV 280
C+
Sbjct: 551 CL 552
Score = 219 (82.2 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 53/155 (34%), Positives = 84/155 (54%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+++ S S D T+++W+ ETGE L+GH +V+ + + K +VS S D +L++WD+
Sbjct: 354 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 411
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QCL + GH V V + + V+S + D +K+W+ T C+ TL GH V +
Sbjct: 412 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ DG + S S D + RVW + T L GH
Sbjct: 470 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 502
Score = 219 (82.2 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 175 WDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + K ++GHD H +T + F N ++S S D T+K+W TG C++TL GH
Sbjct: 287 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 234 --WVRQ------IKVSPDGTL------LASCSND---HTARVWSLATKETKAELRGHDHT 276
W Q I S D TL C + HT+ V + E + D T
Sbjct: 345 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 404
Query: 277 VECVAWAPGVASESI-SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ G + A + +G+ D +K+WD + + L TL GH N
Sbjct: 405 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 464
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V + F G ++VS D ++RVWD + TL H + ++ +V+G+
Sbjct: 465 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 520
Query: 396 VDKTVKVWECR 406
D TVK+W+ +
Sbjct: 521 ADSTVKIWDIK 531
Score = 216 (81.1 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 47/148 (31%), Positives = 82/148 (55%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S + D +++WD ET L GH + V + FD G +VS S D S+++WD+ T
Sbjct: 436 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETG 493
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG---HREWVRQ 237
C+ T+ GH +G+ N ++S + D T+K+W++ TG C++TL G H+ V
Sbjct: 494 NCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTC 551
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKE 265
++ + + + + S+D T ++W L T E
Sbjct: 552 LQFNKN--FVITSSDDGTVKLWDLKTGE 577
Score = 211 (79.3 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 49/139 (35%), Positives = 77/139 (55%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P L GH + V + F + + S S D +IR+WD ETG L GH S
Sbjct: 448 WDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGH-QS 504
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDFVLSAS 209
+ + +LVS +AD ++K+WD+ T QCL+T+QG + + V L N +FV+++S
Sbjct: 505 LTS-GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSS 563
Query: 210 RDKTIKMWEVATGYCVKTL 228
D T+K+W++ TG ++ L
Sbjct: 564 DDGTVKLWDLKTGEFIRNL 582
Score = 209 (78.6 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 77/263 (29%), Positives = 114/263 (43%)
Query: 134 DYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
++ GE + + L GH D V G +VS S D +LK+W T +CL+T+ GH
Sbjct: 286 NWRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 344
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V N ++S S D+T+K+W TG C+ TL GH VR + + + S S
Sbjct: 345 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGS 400
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT-- 309
D T RVW + T + L GH V CV + + L T
Sbjct: 401 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 460
Query: 310 GSRDKTIKL-WD---VGSGSLLFTLIGHD----NWVRGVTFHPG---G-----KYLVSCG 353
G ++ L +D V SGSL ++ D N + +T H G LVS
Sbjct: 461 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 520
Query: 354 DDKTLRVWDTANKRNMKTLEAHS 376
D T+++WD + ++TL+ S
Sbjct: 521 ADSTVKIWDIKTGQCLQTLQGPS 543
Score = 60 (26.2 bits), Expect = 7.2e-28, Sum P(2) = 7.2e-28
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLI 331
++ T S D T+KLWD+ +G + L+
Sbjct: 558 FVITSSDDGTVKLWDLKTGEFIRNLV 583
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 295 (108.9 bits), Expect = 9.7e-28, Sum P(2) = 9.7e-28
Identities = 84/309 (27%), Positives = 131/309 (42%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P L+A+ +LW L GH +V I F
Sbjct: 228 GDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATVS 287
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
D+ L SC+AD S+KLW + + + + ++GH V V + P+ F+ + D + +
Sbjct: 288 LDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWR 347
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH + V I DG+L + D RVW L T L GH
Sbjct: 348 LWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 407
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ + ++P ++ATGS D T K+WD+ ++T+ H N
Sbjct: 408 EIYGLNFSPN------------------GYHVATGSGDNTCKVWDLRQRKCIYTIPAHQN 449
Query: 336 WVRGVTFHPG-GKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V GV F P G +L++ D T ++W +KTL H V LD + T
Sbjct: 450 LVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATC 509
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 510 SYDRTFKLW 518
Score = 270 (100.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 60/171 (35%), Positives = 89/171 (52%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W A E+ GH V + FH SL + DA R+WD TG L GHL
Sbjct: 349 WDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKE 408
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN-SDFVLSAS 209
+ + F +G + + S D + K+WD+ +C+ T+ H + VTGV F PN +F+L+ +
Sbjct: 409 IYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGA 468
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
D T K+W +KTL GH V + +S DG L+A+CS D T ++W+
Sbjct: 469 YDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWT 519
Score = 263 (97.6 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--GHL 148
W + E A + GH V +V++HP + + D + RLWD E E LH GH
Sbjct: 307 WSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEA--QEEILHQEGHS 364
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
V DIAF G L + D ++WD+ T +C+ ++GH + G+ F PN V +
Sbjct: 365 KGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATG 424
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETK 267
S D T K+W++ C+ T+ H+ V +K P+ G L + + D+TA++W+
Sbjct: 425 SGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPL 484
Query: 268 AELRGHDHTV 277
L GH+ V
Sbjct: 485 KTLAGHEGKV 494
Score = 247 (92.0 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 57/202 (28%), Positives = 98/202 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHP--VFSL------MASCSEDATIRLWDYETGEYER 142
W +P L GH + V ++FHP SL +ASC+ D +++LW E+ E
Sbjct: 257 WSVPDCNLVHTLRGHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSLESDEPVA 316
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH V + + SG+ L + D S +LWD+ + + +GH V +AF +
Sbjct: 317 DIEGHSMRVARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDG 376
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ D ++W++ TG C+ L GH + + + SP+G +A+ S D+T +VW L
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLR 436
Query: 263 TKETKAELRGHDHTVECVAWAP 284
++ + H + V V + P
Sbjct: 437 QRKCIYTIPAHQNLVTGVKFEP 458
Score = 164 (62.8 bits), Expect = 5.2e-09, Sum P(2) = 5.2e-09
Identities = 62/224 (27%), Positives = 85/224 (37%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247
G D ++ F PNS + +A K+W V V TL GH V I P T+
Sbjct: 228 GDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKATV- 286
Query: 248 ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA-----PGVASESISEAAXXXXXXX 302
SL K+ D +V+ W+ P E S
Sbjct: 287 ------------SLDKKDVNLASCAADGSVKL--WSLESDEPVADIEGHSMRVARVMWHP 332
Query: 303 XXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+L T D + +LWD+ + + GH V + FH G + G D RVWD
Sbjct: 333 SGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWD 392
Query: 363 TANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R + LE H + L+F +V TGS D T KVW+ R
Sbjct: 393 LRTGRCIMFLEGHLKEIYGLNFSPNGYHVATGSGDNTCKVWDLR 436
Score = 41 (19.5 bits), Expect = 9.7e-28, Sum P(2) = 9.7e-28
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 3 LSQRQREELNKAVADYLLSNGYLSALE 29
L +++RE L K + L G +ALE
Sbjct: 34 LEEKERERLAKGESGLLGKEGMKAALE 60
Score = 40 (19.1 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 81 APTRAKRSPTEWIPRAPEKFALSGHRSPV 109
AP R + SPT+ P + E A R+P+
Sbjct: 2 APRRTRSSPTKSKP-SEEGDAPPAKRAPI 29
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 93/319 (29%), Positives = 148/319 (46%)
Query: 91 EWIPRAPEKFA--LSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGH 147
EW AP K + ++GH V V PV + + S D T+++WD TG+ + L GH
Sbjct: 124 EW--HAPWKLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGH 181
Query: 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+ +V+D+A L S S D ++K WD+ Q ++ GH V V+ P D + +
Sbjct: 182 VMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIAT 241
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
A RD IK+W++ T V TL GH+ + Q++ +P + S S D T R+W + +T
Sbjct: 242 AGRDSVIKLWDMRTRIPVITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTM 301
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLL 327
L H +V A P S++ A LA GS + G ++
Sbjct: 302 KVLTHHKRSVRATALHP--KEFSVASACTDDIRSWG---LAEGSLLTNFESEKTG---II 353
Query: 328 FTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK-TLEAHSHFVTSLDFH 385
TL I D+ V F G ++S D K+ + + R M +LE + S F
Sbjct: 354 NTLSINQDD----VLFAGGDNGVLSFYDYKSGHKYQSLATREMVGSLEGERSVLCST-FD 408
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ ++TG DK++K+W+
Sbjct: 409 KTGLRLITGEADKSIKIWK 427
Score = 167 (63.8 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ TGS D T+K+WD+ +G L TL GH VR V YL S +DKT++ WD
Sbjct: 154 WFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFSVSEDKTVKCWDLEK 213
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++ H V ++ H + T D +K+W+ R
Sbjct: 214 NQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMR 254
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 318 (117.0 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 68/188 (36%), Positives = 93/188 (49%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH PV F P + S S D TIRLW + GH V D F G
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGH 473
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS D + ++W M Q L+ M GH +V V + PN +++ + S DKT+++W+V T
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G CV+ GHR V + +SPDG +AS D T +W L+T L GH+ CV
Sbjct: 534 GECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN---SCV- 589
Query: 282 WAPGVASE 289
W+ + E
Sbjct: 590 WSLSYSGE 597
Score = 286 (105.7 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 59/168 (35%), Positives = 91/168 (54%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV F P ASCS D T R+W + + R + GHL V + + + +
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYI 517
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S+D +++LWD+ T +C++ GH V +A P+ ++ S D TI MW+++T
Sbjct: 518 ATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTAR 577
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL--ATKETKAE 269
C+ L GH V + S +G+LLAS S D T ++W + +TK TKAE
Sbjct: 578 CITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAE 625
Score = 217 (81.4 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
++GH S V V +HP + +A+ S D T+RLWD +TGE R GH V +A G+
Sbjct: 498 MAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGR 557
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ S D ++ +WD+ST +C+ + GH+ V +++ + S S D T+K+W+V +
Sbjct: 558 YMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
Score = 201 (75.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 38/99 (38%), Positives = 58/99 (58%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS DKT++LWDV +G + IGH + V + P G+Y+ S +D T+ +WD +
Sbjct: 516 YIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLST 575
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R + L H+ V SL + + +GS D TVK+W+
Sbjct: 576 ARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 614
Score = 179 (68.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 45/171 (26%), Positives = 77/171 (45%)
Query: 240 VSPDGTLLASCSNDHTARVWSLAT--KETKAELRGHDHTVECVAWAPGVASESI----SE 293
+S DG+L+A +D + +VW +A + L+ + + + G S ++ S
Sbjct: 360 ISHDGSLVAGGFSDSSIKVWDMAKIGQAGSGALQAENDSSDQSIGPNGRRSYTLLLGHSG 419
Query: 294 AAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG 353
++ + S D TI+LW + L GH+ V F P G Y SC
Sbjct: 420 PVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCS 479
Query: 354 DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
D+T R+W + ++ + H V + +H Y+ TGS DKTV++W+
Sbjct: 480 HDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWD 530
Score = 139 (54.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y A+ S D+T ++W + L + GH + V V +HP Y+ + DKT+R+WD
Sbjct: 474 YFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H V SL Y+ +G D T+ +W+
Sbjct: 534 GECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWD 572
Score = 48 (22.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 155 AFDQSGKLLVSCSADMSLKLWDMS 178
+ G L+ +D S+K+WDM+
Sbjct: 359 SISHDGSLVAGGFSDSSIKVWDMA 382
Score = 44 (20.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
SL+A D++I++WD + +A G L + D + DQS
Sbjct: 365 SLVAGGFSDSSIKVWDM--AKIGQAGSGALQAENDSS-DQS 402
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 61/200 (30%), Positives = 102/200 (51%)
Query: 88 SPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGH 147
+PT+ +L GH V V+ S S D T+RLWD G R GH
Sbjct: 52 TPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGH 111
Query: 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG---HDHNVTGVAFLPNSDF 204
V +AF + ++S S D ++K+W+ + +C T++G H V+ + F PN+
Sbjct: 112 TQDVMSVAFSSDNRQIISGSRDATIKVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPT 170
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
++S S D +K+W++ + C TLT H +V + +SPDG+L AS D A +W L++
Sbjct: 171 IVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSG 230
Query: 265 ETKAELRGHDHTVECVAWAP 284
+ +L + T+ +A++P
Sbjct: 231 KPLYKLEARN-TINALAFSP 249
Score = 248 (92.4 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 73/237 (30%), Positives = 117/237 (49%)
Query: 179 TYQCLKTMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEV----AT--GYCVKTLTGH 231
TY + ++ GH+ VT +A P N D ++S+SRDKT+ +W++ AT G ++L GH
Sbjct: 10 TYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGH 69
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL-RGHDHTVECVAWAPGVASES 290
+V+ + +S DG S S D+T R+W + TK L +GH V VA++ S++
Sbjct: 70 SHFVQDVVISHDGQFALSGSWDNTLRLWDI-TKGVSTRLFKGHTQDVMSVAFS----SDN 124
Query: 291 ISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG---HDNWVRGVTFHPGGK 347
+ +GSRD TIK+W+ G FTL G H +WV + F P
Sbjct: 125 --------------RQIISGSRDATIKVWNT-LGECKFTLEGPEAHQDWVSCIRFSPNTP 169
Query: 348 YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+VS D +++WD + + TL H+ +V ++ +G D +WE
Sbjct: 170 TIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWE 226
Score = 242 (90.2 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 60/194 (30%), Positives = 94/194 (48%)
Query: 101 ALSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY------ETGEYERALHGHLDSVQD 153
+L GH V + P + S S D T+ +W G+ R+L GH VQD
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+ G+ +S S D +L+LWD++ + +GH +V VAF ++ ++S SRD T
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 214 IKMWEVATGYCVKTLTG---HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
IK+W G C TL G H++WV I+ SP+ + S S D+ ++W + + + L
Sbjct: 136 IKVWNTL-GECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTL 194
Query: 271 RGHDHTVECVAWAP 284
H V V +P
Sbjct: 195 TDHTGYVNTVTISP 208
Score = 234 (87.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 67/269 (24%), Positives = 119/269 (44%)
Query: 143 ALHGHLDSVQDIAFD-QSGKLLVSCSADMSLKLWDM------STYQCLKTMQGHDHNVTG 195
+L GH V IA ++ ++S S D ++ +W + S + ++++GH H V
Sbjct: 16 SLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQD 75
Query: 196 VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
V + F LS S D T+++W++ G + GH + V + S D + S S D T
Sbjct: 76 VVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDAT 135
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKT 315
+VW+ E K L G + + W + + + +GS D
Sbjct: 136 IKVWN-TLGECKFTLEGPEAHQD---WVSCIRFSPNTPT------------IVSGSWDNK 179
Query: 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+K+WD+ S TL H +V VT P G S G D +W+ ++ + + LEA
Sbjct: 180 VKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEAR 239
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ + +L F + Y ++ + D + +W+
Sbjct: 240 NT-INALAFS-PNKYWLSAATDDKIIIWD 266
Score = 204 (76.9 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 62/192 (32%), Positives = 91/192 (47%)
Query: 225 VKTLTGHREWVRQIKVSPDG--TLLASCSNDHTARVWSL----ATKETKAE--LRGHDHT 276
V +L GH +V I VSP+ T+++S S D T VW L AT KA L+GH H
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISS-SRDKTVMVWQLTPTDATSPGKAHRSLKGHSHF 72
Query: 277 VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336
V+ V IS + +GS D T++LWD+ G GH
Sbjct: 73 VQDVV---------ISHDGQ---------FALSGSWDNTLRLWDITKGVSTRLFKGHTQD 114
Query: 337 VRGVTFHPGGKYLVSCGDDKTLRVWDTAN--KRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V V F + ++S D T++VW+T K ++ EAH +V+ + F P +V+G
Sbjct: 115 VMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSG 174
Query: 395 SVDKTVKVWECR 406
S D VK+W+ +
Sbjct: 175 SWDNKVKIWDIK 186
Score = 198 (74.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 51/170 (30%), Positives = 83/170 (48%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHG---HLDSVQDIAFDQSG 160
GH V+ V F + S S DATI++W+ GE + L G H D V I F +
Sbjct: 110 GHTQDVMSVAFSSDNRQIISGSRDATIKVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNT 168
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+VS S D +K+WD+ +++C T+ H V V P+ S +D +WE++
Sbjct: 169 PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELS 228
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
+G + L R + + SP+ L++ ++D +W L TK+ AE+
Sbjct: 229 SGKPLYKLEA-RNTINALAFSPNKYWLSAATDDKII-IWDLLTKQVLAEI 276
Score = 87 (35.7 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
A+G +D LW++ SG L+ L N + + F P +L + DDK + +WD K+
Sbjct: 214 ASGGKDTFACLWELSSGKPLYKLEAR-NTINALAFSPNKYWLSAATDDKII-IWDLLTKQ 271
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 315 (115.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 86/309 (27%), Positives = 139/309 (44%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------D 157
G PV F SL+ + S +LW E ++ L GH V +A D
Sbjct: 259 GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTLRGHASYVGGVALRPGVKAD 318
Query: 158 QSGKL-LVSCSADMSLKLWDMSTYQCLKTMQGH-DHNVTGVAFLPNSDFVLSASRDKTIK 215
+ + + S D ++KLW + + + + GH H V+ VAF P+ F+ +A D + +
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWR 378
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ V GH + V + DG++L + D RVW L T L GH
Sbjct: 379 LWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLG 438
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
V V ++P ++ATGS+D T K+WD+ ++T+ H N
Sbjct: 439 AVFGVDFSPN------------------GFHIATGSQDNTCKIWDLRRRQPVYTIPAHTN 480
Query: 336 WVRGVTFHPG-GKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
+ V + G +LV+C D T ++W + +KTL+ H + V S+D Y+ T
Sbjct: 481 LISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATT 540
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 541 SFDRTFKLW 549
Score = 277 (102.6 bits), Expect = 8.5e-25, Sum P(2) = 8.5e-25
Identities = 62/187 (33%), Positives = 98/187 (52%)
Query: 102 LSGHRSP-VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--GHLDSVQDIAFDQ 158
++GH V KV FHP +A+ D++ RLWD E + LH GH V +++
Sbjct: 348 ITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLE--QKTEVLHQEGHAKPVHCLSYHS 405
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
G +LV+ D ++WD+ T +C+ ++GH V GV F PN + + S+D T K+W+
Sbjct: 406 DGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWD 465
Query: 219 VATGYCVKTLTGHREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+ V T+ H + +K + G+ L +CS D T ++WS T + L+GHD+ V
Sbjct: 466 LRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKV 525
Query: 278 ECVAWAP 284
V AP
Sbjct: 526 ISVDIAP 532
Score = 222 (83.2 bits), Expect = 9.3e-17, Sum P(2) = 9.3e-17
Identities = 51/171 (29%), Positives = 86/171 (50%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W + + E GH PV + +H S++ + DA R+WD TG L GHL +
Sbjct: 380 WDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVWDLRTGRCIMFLEGHLGA 439
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN-SDFVLSAS 209
V + F +G + + S D + K+WD+ Q + T+ H + ++ V + F+++ S
Sbjct: 440 VFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLISDVKYQQECGSFLVTCS 499
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
D T K+W T +KTL GH V + ++P+ +A+ S D T ++WS
Sbjct: 500 YDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAPNSQYIATTSFDRTFKLWS 550
Score = 190 (71.9 bits), Expect = 6.0e-12, P = 6.0e-12
Identities = 63/238 (26%), Positives = 103/238 (43%)
Query: 169 DMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
+M KL ++ C + G V+ AF +S +L++S K+W V +TL
Sbjct: 243 EMQKKLQSLAPL-CSQV--GDTRPVSSAAFSEDSSLLLTSSWSGLCKLWSVPDCELKQTL 299
Query: 229 TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288
GH +V + + P ++ + S + +L G ++ E +A G
Sbjct: 300 RGHASYVGGVALRPG----VKADEENVVAMAS-GGHDGAVKLWGFNNE-ESIADITGHMP 353
Query: 289 ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY 348
+S+ A +LAT D + +LWD+ + + GH V +++H G
Sbjct: 354 HRVSKVAFHPSGR----FLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSV 409
Query: 349 LVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
LV+ G D RVWD R + LE H V +DF ++ TGS D T K+W+ R
Sbjct: 410 LVTGGLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLR 467
Score = 51 (23.0 bits), Expect = 8.5e-25, Sum P(2) = 8.5e-25
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 306 YLATGSRDKTIKLWDVGS 323
Y+AT S D+T KLW S
Sbjct: 536 YIATTSFDRTFKLWSPDS 553
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 312 (114.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 94/314 (29%), Positives = 146/314 (46%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH VI V F P +AS S D T+R WD T GH V I++ G
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 169
Query: 161 KLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLP---NSD--FVLSASRDKTI 214
K L S + + LWD ST Q + + GH +T +++ P N + +V S+S+D ++
Sbjct: 170 KKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSV 229
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W+ G C +TLTGH + V ++ DG LL S S D T +VW L+GH
Sbjct: 230 RVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHG 288
Query: 275 HTVECVAWAPGVASESIS-EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
H V +A + A + + E A + ++D L ++ +L
Sbjct: 289 HWVNTMALSTDYALRTGAFEPAEA----------SVNAQDLRGSLQELKERAL-----SR 333
Query: 334 DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
N VRG G + LVS DD TL +W A +K+ + + H + + F +
Sbjct: 334 YNLVRG----QGPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIA 389
Query: 393 TGSVDKTVKVWECR 406
+ S DK++K+W+ R
Sbjct: 390 SASFDKSIKLWDGR 403
Score = 291 (107.5 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 86/315 (27%), Positives = 143/315 (45%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFDQ 158
F GHR V+ + + P +AS ++ I LWD TG + RAL GH + ++++
Sbjct: 151 FTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEP 210
Query: 159 -----SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDK 212
+ + S S D S+++WD + +C +T+ GH +VT + + D +L SAS+D+
Sbjct: 211 LHANPECRYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRW--GGDGLLYSASQDR 268
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
TIK+W G +TL GH WV + +S D L A V + + + EL+
Sbjct: 269 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELK- 327
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLI 331
+ + G E L +GS D T+ LW L +
Sbjct: 328 -ERALSRYNLVRGQGPER----------------LVSGSDDFTLFLWSPAEDKKPLARMT 370
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
GH + V F P + + S DK++++WD + + +L H V + + +
Sbjct: 371 GHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 430
Query: 392 VTGSVDKTVKVWECR 406
V+GS D T+KVW+ +
Sbjct: 431 VSGSSDSTLKVWDVK 445
Score = 263 (97.6 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 63/204 (30%), Positives = 100/204 (49%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C +++GH V VAF P ++ S S D T++ W+++T T GHR WV I
Sbjct: 106 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 165
Query: 241 SPDGTLLAS-CSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
SPDG LAS C N +W +T K+ L GH + ++W P A+
Sbjct: 166 SPDGKKLASGCKNGQIL-LWDPSTGKQVGRALTGHSKWITALSWEPLHANPECR------ 218
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y+A+ S+D ++++WD +G TL GH V + + G L S D+T+
Sbjct: 219 -------YVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTI 270
Query: 359 RVWDTANKRNMKTLEAHSHFVTSL 382
+VW + +TL+ H H+V ++
Sbjct: 271 KVWRAHDGVLCRTLQGHGHWVNTM 294
Score = 225 (84.3 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 46/128 (35%), Positives = 76/128 (59%)
Query: 92 WIPRAPEK-FA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P +K A ++GH++ + +V+F P ++AS S D +I+LWD TG+Y +L GH+
Sbjct: 357 WSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVA 416
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA+ +LLVS S+D +LK+WD+ + + GH V V + P+ V S
Sbjct: 417 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGG 476
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 477 KDKCLRIW 484
Score = 210 (79.0 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 59/171 (34%), Positives = 84/171 (49%)
Query: 125 SEDATIRLWDYETGEYE---RALHGHLDSVQDIAFD-------QSGKLLVSCSADMSLKL 174
S D +R +E E + L G L +++ A Q + LVS S D +L L
Sbjct: 297 STDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFL 356
Query: 175 WDMST-YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + + L M GH + V F P+S + SAS DK+IK+W+ TG + +L GH
Sbjct: 357 WSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVA 416
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
V QI S D LL S S+D T +VW + ++ +L GH V V W+P
Sbjct: 417 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSP 467
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 121 MASCSEDATIRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D T+ LW + A + GH + + F +++ S S D S+KLWD T
Sbjct: 345 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRT 404
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L +++GH V +A+ +S ++S S D T+K+W+V L GH + V +
Sbjct: 405 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVD 464
Query: 240 VSPDGTLLASCSNDHTARVW 259
SPDG +AS D R+W
Sbjct: 465 WSPDGQRVASGGKDKCLRIW 484
Score = 149 (57.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+IKLWD +G L +L GH V + + + LVS D TL+VWD +
Sbjct: 388 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 447
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H+ V ++D+ V +G DK +++W
Sbjct: 448 KLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 37 (18.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 262 ATKETKAELRGHDHTVECVAWAP 284
A + L GH V VA++P
Sbjct: 103 AVTRCTSSLEGHSEAVISVAFSP 125
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 283 (104.7 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 64/182 (35%), Positives = 102/182 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH S V + H + S S DAT+R+WD ETG+ L GH+ +V+ + +D G+
Sbjct: 457 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GR 512
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS + D +K+WD T CL T+QGH + V + F + V+S S D +I++W+V T
Sbjct: 513 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 570
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG---HDHTVE 278
G C+ TLTGH+ +++ + +L S + D T ++W + T + L+G H V
Sbjct: 571 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 628
Query: 279 CV 280
C+
Sbjct: 629 CL 630
Score = 219 (82.2 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 53/155 (34%), Positives = 84/155 (54%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+++ S S D T+++W+ ETGE L+GH +V+ + + K +VS S D +L++WD+
Sbjct: 432 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 489
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QCL + GH V V + + V+S + D +K+W+ T C+ TL GH V +
Sbjct: 490 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 547
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ DG + S S D + RVW + T L GH
Sbjct: 548 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 580
Score = 219 (82.2 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 175 WDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + K ++GHD H +T + F N ++S S D T+K+W TG C++TL GH
Sbjct: 365 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 422
Query: 234 --WVRQ------IKVSPDGTL------LASCSND---HTARVWSLATKETKAELRGHDHT 276
W Q I S D TL C + HT+ V + E + D T
Sbjct: 423 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 482
Query: 277 VECVAWAPGVASESI-SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ G + A + +G+ D +K+WD + + L TL GH N
Sbjct: 483 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 542
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V + F G ++VS D ++RVWD + TL H + ++ +V+G+
Sbjct: 543 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 598
Query: 396 VDKTVKVWECR 406
D TVK+W+ +
Sbjct: 599 ADSTVKIWDIK 609
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 47/148 (31%), Positives = 82/148 (55%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S + D +++WD ET L GH + V + FD G +VS S D S+++WD+ T
Sbjct: 514 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETG 571
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG---HREWVRQ 237
C+ T+ GH +G+ N ++S + D T+K+W++ TG C++TL G H+ V
Sbjct: 572 NCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 629
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKE 265
++ + + + + S+D T ++W L T E
Sbjct: 630 LQFNKN--FVITSSDDGTVKLWDLKTGE 655
Score = 212 (79.7 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 49/139 (35%), Positives = 78/139 (56%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P L GH + V + F + + S S D +IR+WD ETG L GH S
Sbjct: 526 WDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGH-QS 582
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDFVLSAS 209
+ + +LVS +AD ++K+WD+ T QCL+T+QG + + + V L N +FV+++S
Sbjct: 583 LTS-GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 641
Query: 210 RDKTIKMWEVATGYCVKTL 228
D T+K+W++ TG ++ L
Sbjct: 642 DDGTVKLWDLKTGEFIRNL 660
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 76/260 (29%), Positives = 113/260 (43%)
Query: 134 DYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
++ GE + + L GH D V G +VS S D +LK+W T +CL+T+ GH
Sbjct: 364 NWRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 422
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V N ++S S D+T+K+W TG C+ TL GH VR + + + S S
Sbjct: 423 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGS 478
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT-- 309
D T RVW + T + L GH V CV + + L T
Sbjct: 479 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 538
Query: 310 GSRDKTIKL-WD---VGSGSLLFTLIGHD----NWVRGVTFHPG---G-----KYLVSCG 353
G ++ L +D V SGSL ++ D N + +T H G LVS
Sbjct: 539 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 598
Query: 354 DDKTLRVWDTANKRNMKTLE 373
D T+++WD + ++TL+
Sbjct: 599 ADSTVKIWDIKTGQCLQTLQ 618
Score = 60 (26.2 bits), Expect = 1.2e-27, Sum P(2) = 1.2e-27
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLI 331
++ T S D T+KLWD+ +G + L+
Sbjct: 636 FVITSSDDGTVKLWDLKTGEFIRNLV 661
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 266 (98.7 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 64/204 (31%), Positives = 102/204 (50%)
Query: 181 QCLKTMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+C ++ GH + +F P +S ++S S D T ++W+ TG + TL GH WV +
Sbjct: 139 RCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETK-AELRGHDHTVECVAWAPGVASESISEAAXXX 298
SP+G ++A+ S D+T R+W + A L+GH + +AW P +S
Sbjct: 199 YSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQS-------- 250
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S+D T+++WDV S L GH V V + GK S D+T+
Sbjct: 251 ----GHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGTGKIYTS-SHDRTI 305
Query: 359 RVWDTANKRNMKTLEAHSHFVTSL 382
+VW++ ++TL AH+H V L
Sbjct: 306 KVWNSQTGTLIQTLSAHAHRVNHL 329
Score = 236 (88.1 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 70/264 (26%), Positives = 119/264 (45%)
Query: 86 KRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWD-----YETGEY 140
+R P + ++ +K + ++ I+H + +ED TI+L+ +
Sbjct: 79 ERVPYRFTFQSDDKDSKDSQTIDILADIYHSLLKPGVKTTED-TIQLYFTPQAIFRVKAV 137
Query: 141 ER---ALHGHLDSVQDIAFDQ-SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV 196
R ++ GH +++ +F S +VS S D + ++WD T L T++GH V V
Sbjct: 138 SRCSASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAV 197
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKT-LTGHREWVRQIKVSP-----DG-TLLAS 249
++ PN + + S D T+++W+ G + L GH +W+ + P G LAS
Sbjct: 198 SYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLAS 257
Query: 250 CSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT 309
S D T R+W + +K L GH +V CV W G + T
Sbjct: 258 ASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWG-GTGK------------------IYT 298
Query: 310 GSRDKTIKLWDVGSGSLLFTLIGH 333
S D+TIK+W+ +G+L+ TL H
Sbjct: 299 SSHDRTIKVWNSQTGTLIQTLSAH 322
Score = 215 (80.7 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 51/169 (30%), Positives = 83/169 (49%)
Query: 93 IPRAP-EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA-LHGHLDS 150
+P + +K A++ R I + + + S S+D T+ LWD E+ A L GH
Sbjct: 348 VPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKE 407
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V + F + S D +KLW+ + + T++GH V F +S ++S+S+
Sbjct: 408 VNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSK 467
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
D T+K+W V TG + L GH++ V + SPDG + S D R+W
Sbjct: 468 DTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 214 (80.4 bits), Expect = 9.8e-15, P = 9.8e-15
Identities = 96/315 (30%), Positives = 138/315 (43%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA-LHGHLDSVQDIAFDQSG 160
L GH S V+ V + P +++A+ S D T+R+WD + G+ A L GH+ + +A++
Sbjct: 187 LKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPY- 245
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK-TIKMWEV 219
L S ++ D ST + + +D VLS + T W
Sbjct: 246 HLQQSGHPRLASASKD-STVRIWDVIS------------KRADIVLSGHKGSVTCVRWG- 291
Query: 220 ATGYCVKTLTGHREWVRQIKV--SPDGTLLASCSNDHTARVWSLATKETKAELRG--HDH 275
TG K T + R IKV S GTL+ + S H RV LA T LR HDH
Sbjct: 292 GTG---KIYTSSHD--RTIKVWNSQTGTLIQTLSA-HAHRVNHLALS-TDFILRTAYHDH 344
Query: 276 T---VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLI 331
T E A +A + +AA L + S D T+ LWD S S + L+
Sbjct: 345 TGKVPESDADKVAMAKKRFEKAATINNKIVEK--LVSASDDFTMYLWDPESSSKPVARLL 402
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
GH V VTF P Y+ S G D +++W+ + + + TL H V F +
Sbjct: 403 GHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLL 462
Query: 392 VTGSVDKTVKVWECR 406
V+ S D T+KVW R
Sbjct: 463 VSSSKDTTLKVWNVR 477
Score = 197 (74.4 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 45/123 (36%), Positives = 63/123 (51%)
Query: 163 LVSCSADMSLKLWDM-STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
LVS S D ++ LWD S+ + + + GH V V F P+ ++ SA D +K+W
Sbjct: 377 LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRD 436
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G + TL GH V Q S D LL S S D T +VW++ T + +L GH V V
Sbjct: 437 GKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVD 496
Query: 282 WAP 284
W+P
Sbjct: 497 WSP 499
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 92 WIPRAPEK--FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P + K L GH+ V V F P + +AS D ++LW+ G++ L GH+
Sbjct: 389 WDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVG 448
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V F +LLVS S D +LK+W++ T + + + GH V V + P+ V S
Sbjct: 449 AVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGG 508
Query: 210 RDKTIKMW 217
+DK I++W
Sbjct: 509 KDKAIRIW 516
Score = 180 (68.4 bits), Expect = 7.2e-11, P = 7.2e-11
Identities = 35/105 (33%), Positives = 59/105 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +GS D T ++WD +G+ L TL GH +WV V++ P G + + D T+R+WD
Sbjct: 164 MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKG 223
Query: 367 RNMKT-LEAHSHFVTSL---DFH---RAHPYVVTGSVDKTVKVWE 404
+ + L+ H ++TSL +H HP + + S D TV++W+
Sbjct: 224 QALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWD 268
Score = 137 (53.3 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 30/98 (30%), Positives = 47/98 (47%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+A+ D +KLW+ G + TL GH V F + LVS D TL+VW+
Sbjct: 419 YIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRT 478
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + L H V ++D+ V +G DK +++W
Sbjct: 479 GKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 121 (47.7 bits), Expect = 0.00026, P = 0.00026
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 329 TLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRA 387
++ GH + +F P +VS D T R+WD + TL+ H+ +V ++ +
Sbjct: 143 SIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPN 202
Query: 388 HPYVVTGSVDKTVKVWECR 406
+ TGS+D TV++W+ +
Sbjct: 203 GAMIATGSMDNTVRIWDAK 221
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 283 (104.7 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 64/182 (35%), Positives = 102/182 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH S V + H + S S DAT+R+WD ETG+ L GH+ +V+ + +D G+
Sbjct: 462 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GR 517
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS + D +K+WD T CL T+QGH + V + F + V+S S D +I++W+V T
Sbjct: 518 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 575
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG---HDHTVE 278
G C+ TLTGH+ +++ + +L S + D T ++W + T + L+G H V
Sbjct: 576 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 633
Query: 279 CV 280
C+
Sbjct: 634 CL 635
Score = 219 (82.2 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 53/155 (34%), Positives = 84/155 (54%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+++ S S D T+++W+ ETGE L+GH +V+ + + K +VS S D +L++WD+
Sbjct: 437 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 494
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QCL + GH V V + + V+S + D +K+W+ T C+ TL GH V +
Sbjct: 495 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 552
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ DG + S S D + RVW + T L GH
Sbjct: 553 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 585
Score = 219 (82.2 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 175 WDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + K ++GHD H +T + F N ++S S D T+K+W TG C++TL GH
Sbjct: 370 WRRGELKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 427
Query: 234 --WVRQ------IKVSPDGTL------LASCSND---HTARVWSLATKETKAELRGHDHT 276
W Q I S D TL C + HT+ V + E + D T
Sbjct: 428 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 487
Query: 277 VECVAWAPGVASESI-SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ G + A + +G+ D +K+WD + + L TL GH N
Sbjct: 488 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 547
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V + F G ++VS D ++RVWD + TL H + ++ +V+G+
Sbjct: 548 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 603
Query: 396 VDKTVKVWECR 406
D TVK+W+ +
Sbjct: 604 ADSTVKIWDIK 614
Score = 216 (81.1 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 47/148 (31%), Positives = 82/148 (55%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S + D +++WD ET L GH + V + FD G +VS S D S+++WD+ T
Sbjct: 519 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETG 576
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG---HREWVRQ 237
C+ T+ GH +G+ N ++S + D T+K+W++ TG C++TL G H+ V
Sbjct: 577 NCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 634
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKE 265
++ + + + + S+D T ++W L T E
Sbjct: 635 LQFNKN--FVITSSDDGTVKLWDLKTGE 660
Score = 212 (79.7 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 49/139 (35%), Positives = 78/139 (56%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P L GH + V + F + + S S D +IR+WD ETG L GH S
Sbjct: 531 WDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGH-QS 587
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDFVLSAS 209
+ + +LVS +AD ++K+WD+ T QCL+T+QG + + + V L N +FV+++S
Sbjct: 588 LTS-GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 646
Query: 210 RDKTIKMWEVATGYCVKTL 228
D T+K+W++ TG ++ L
Sbjct: 647 DDGTVKLWDLKTGEFIRNL 665
Score = 207 (77.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 76/260 (29%), Positives = 113/260 (43%)
Query: 134 DYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
++ GE + + L GH D V G +VS S D +LK+W T +CL+T+ GH
Sbjct: 369 NWRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 427
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V N ++S S D+T+K+W TG C+ TL GH VR + + + S S
Sbjct: 428 GVWSSQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVV--SGS 483
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT-- 309
D T RVW + T + L GH V CV + + L T
Sbjct: 484 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 543
Query: 310 GSRDKTIKL-WD---VGSGSLLFTLIGHD----NWVRGVTFHPG---G-----KYLVSCG 353
G ++ L +D V SGSL ++ D N + +T H G LVS
Sbjct: 544 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGN 603
Query: 354 DDKTLRVWDTANKRNMKTLE 373
D T+++WD + ++TL+
Sbjct: 604 ADSTVKIWDIKTGQCLQTLQ 623
Score = 60 (26.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLI 331
++ T S D T+KLWD+ +G + L+
Sbjct: 641 FVITSSDDGTVKLWDLKTGEFIRNLV 666
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 284 (105.0 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 65/182 (35%), Positives = 103/182 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH S V + H + S S DAT+R+WD ETG+ L GH+ +V+ + +D G+
Sbjct: 510 LYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD--GR 565
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS + D +K+WD T CL T+QGH + V + F + V+S S D +I++W+V T
Sbjct: 566 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET 623
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG-HDH--TVE 278
G C+ TLTGH+ +++ + +L S + D T ++W + T + L+G H H V
Sbjct: 624 GNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVT 681
Query: 279 CV 280
C+
Sbjct: 682 CL 683
Score = 219 (82.2 bits), Expect = 8.0e-17, Sum P(2) = 8.0e-17
Identities = 53/155 (34%), Positives = 84/155 (54%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+++ S S D T+++W+ ETGE L+GH +V+ + + K +VS S D +L++WD+
Sbjct: 485 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIE 542
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QCL + GH V V + + V+S + D +K+W+ T C+ TL GH V +
Sbjct: 543 TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 600
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ DG + S S D + RVW + T L GH
Sbjct: 601 QF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGH 633
Score = 219 (82.2 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 69/251 (27%), Positives = 108/251 (43%)
Query: 175 WDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + K ++GHD H +T + F N ++S S D T+K+W TG C++TL GH
Sbjct: 418 WRRGDLKSPKVLKGHDDHVITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTG 475
Query: 234 --WVRQ------IKVSPDGTL------LASCSND---HTARVWSLATKETKAELRGHDHT 276
W Q I S D TL C + HT+ V + E + D T
Sbjct: 476 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 535
Query: 277 VECVAWAPGVASESI-SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ G + A + +G+ D +K+WD + + L TL GH N
Sbjct: 536 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 595
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V + F G ++VS D ++RVWD + TL H + ++ +V+G+
Sbjct: 596 RVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGN 651
Query: 396 VDKTVKVWECR 406
D TVK+W+ +
Sbjct: 652 ADSTVKIWDIK 662
Score = 217 (81.4 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 46/146 (31%), Positives = 79/146 (54%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S + D +++WD ET L GH + V + FD G +VS S D S+++WD+ T
Sbjct: 567 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETG 624
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG-HREWVRQIK 239
C+ T+ GH +G+ N ++S + D T+K+W++ TG C++TL G H+
Sbjct: 625 NCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTC 682
Query: 240 VSPDGTLLASCSNDHTARVWSLATKE 265
+ + + + S+D T ++W L T E
Sbjct: 683 LQFNKNFVITSSDDGTVKLWDLRTGE 708
Score = 214 (80.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 52/141 (36%), Positives = 79/141 (56%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P L GH + V + F + + S S D +IR+WD ETG L GH S
Sbjct: 579 WDPETETCLHTLQGHTNRVYSLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGH-QS 635
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG-HDHN--VTGVAFLPNSDFVLS 207
+ + +LVS +AD ++K+WD+ T QCL+T+QG H H VT + F N +FV++
Sbjct: 636 LTS-GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQF--NKNFVIT 692
Query: 208 ASRDKTIKMWEVATGYCVKTL 228
+S D T+K+W++ TG ++ L
Sbjct: 693 SSDDGTVKLWDLRTGEFIRNL 713
Score = 206 (77.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 76/286 (26%), Positives = 120/286 (41%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
+ L GH D V G +VS S D +LK+W T +CL+T+ GH V N
Sbjct: 427 KVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 485
Query: 202 ------SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL------LAS 249
+D L +T + G+ H R + S D TL
Sbjct: 486 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ 545
Query: 250 CSN---DHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS--ESIS-EAAXXXXXXXX 303
C + H A V + + +D V+ W P + ++
Sbjct: 546 CLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK--VWDPETETCLHTLQGHTNRVYSLQFD 603
Query: 304 XXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363
++ +GS D +I++WDV +G+ + TL GH + G+ LVS D T+++WD
Sbjct: 604 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDI 661
Query: 364 ANKRNMKTLEA-HSH--FVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL+ H H VT L F++ +V+T S D TVK+W+ R
Sbjct: 662 KTGQCLQTLQGPHKHQSAVTCLQFNKN--FVITSSDDGTVKLWDLR 705
Score = 60 (26.2 bits), Expect = 1.3e-27, Sum P(2) = 1.3e-27
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLI 331
++ T S D T+KLWD+ +G + L+
Sbjct: 689 FVITSSDDGTVKLWDLRTGEFIRNLV 714
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 311 (114.5 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 95/314 (30%), Positives = 146/314 (46%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH VI V F P +AS S D T+R WD T GH V I++ G
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDG 168
Query: 161 KLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLP---NSD--FVLSASRDKTI 214
+ L S + + LWD ST Q +T+ GH +TG+++ P N + +V S+S+D ++
Sbjct: 169 RKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSV 228
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W+ G C + LTGH + V ++ DG LL S S D T +VW L+GH
Sbjct: 229 RIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 275 HTVECVAWAPGVASESIS-EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
H V +A + A + + E A + +D L ++ +L
Sbjct: 288 HWVNTMALSTDYALRTGAFEPAEA----------SVNPQDLQGSLQELKERAL-----SR 332
Query: 334 DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
N VRG G + LVS DD TL +W A +K+ + + H + + F V
Sbjct: 333 YNLVRG----QGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVA 388
Query: 393 TGSVDKTVKVWECR 406
+ S DK++K+W+ R
Sbjct: 389 SASFDKSIKLWDGR 402
Score = 279 (103.3 bits), Expect = 3.2e-23, P = 3.2e-23
Identities = 84/315 (26%), Positives = 140/315 (44%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFDQ 158
F GHR V+ + + P +AS ++ I LWD TG + R L GH + ++++
Sbjct: 150 FTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEP 209
Query: 159 -----SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDK 212
+ + S S D S+++WD + +C + + GH +VT + + D +L SAS+D+
Sbjct: 210 LHANPECRYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRW--GGDGLLYSASQDR 267
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
TIK+W G +TL GH WV + +S D L A V + + EL+
Sbjct: 268 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELK- 326
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT-LI 331
+ + G E L +GS D T+ LW T +
Sbjct: 327 -ERALSRYNLVRGQGPER----------------LVSGSDDFTLFLWSPAEDKKPLTRMT 369
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
GH + V F P + + S DK++++WD + + +L H V + + +
Sbjct: 370 GHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 392 VTGSVDKTVKVWECR 406
V+GS D T+KVW+ +
Sbjct: 430 VSGSSDSTLKVWDVK 444
Score = 256 (95.2 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 62/204 (30%), Positives = 99/204 (48%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C +++GH V VAF P ++ S S D T++ W+++T T GHR WV I
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISW 164
Query: 241 SPDGTLLAS-CSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
SPDG LAS C N +W +T K+ L GH + ++W P A+
Sbjct: 165 SPDGRKLASGCKNGQIL-LWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECR------ 217
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y+A+ S+D ++++WD +G L GH V + + G L S D+T+
Sbjct: 218 -------YVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTI 269
Query: 359 RVWDTANKRNMKTLEAHSHFVTSL 382
+VW + +TL+ H H+V ++
Sbjct: 270 KVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 226 (84.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 45/128 (35%), Positives = 75/128 (58%)
Query: 92 WIPRAPEK--FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P +K ++GH++ + +V+F P ++AS S D +I+LWD TG+Y +L GH+
Sbjct: 356 WSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA+ +LLVS S+D +LK+WD+ + + GH V V + P+ V S
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGG 475
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 476 KDKCLRIW 483
Score = 209 (78.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 60/171 (35%), Positives = 84/171 (49%)
Query: 125 SEDATIRLWDYETGEYE---RALHGHLDSVQDIAFD-------QSGKLLVSCSADMSLKL 174
S D +R +E E + L G L +++ A Q + LVS S D +L L
Sbjct: 296 STDYALRTGAFEPAEASVNPQDLQGSLQELKERALSRYNLVRGQGPERLVSGSDDFTLFL 355
Query: 175 WDMST-YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + + L M GH + V F P+S V SAS DK+IK+W+ TG + +L GH
Sbjct: 356 WSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
V QI S D LL S S+D T +VW + ++ +L GH V V W+P
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP 466
Score = 201 (75.8 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 121 MASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D T+ LW E + + GH + + F +++ S S D S+KLWD T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L +++GH V +A+ +S ++S S D T+K+W+V L GH + V +
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVD 463
Query: 240 VSPDGTLLASCSNDHTARVW 259
SPDG +AS D R+W
Sbjct: 464 WSPDGQRVASGGKDKCLRIW 483
Score = 148 (57.2 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+IKLWD +G L +L GH V + + + LVS D TL+VWD +
Sbjct: 387 VASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H+ V ++D+ V +G DK +++W
Sbjct: 447 KLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 37 (18.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 262 ATKETKAELRGHDHTVECVAWAP 284
A + L GH V VA++P
Sbjct: 102 AVTRCTSSLEGHSEAVISVAFSP 124
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 250 (93.1 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 70/260 (26%), Positives = 119/260 (45%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184
+E+AT L+ E +++L LD + D + + K+ ++ +C
Sbjct: 59 NEEATPYLFFVGEDEIKKSLEDTLDLA---SVDTENVIDIVYQPQAVFKVRPVT--RCTS 113
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244
+M GH V + F P+ + S S D T+++W++ T T TGH++WV + +PDG
Sbjct: 114 SMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDG 173
Query: 245 TLLASCSNDHTARVWSLATKETKAE-LRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
LAS + +W T + K L GH + C+AW P +
Sbjct: 174 KRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRK---------- 223
Query: 304 XXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV-SCGDDKTLRVWD 362
LA+ S D ++WDV G L + GH N V V + GG L+ + D+T+++W
Sbjct: 224 ---LASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW--GGAGLIYTSSKDRTVKMWR 278
Query: 363 TANKRNMKTLEAHSHFVTSL 382
A+ +T H+H+V ++
Sbjct: 279 AADGILCRTFSGHAHWVNNI 298
Score = 232 (86.7 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 48/122 (39%), Positives = 69/122 (56%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
LVSCS D +L LW + +C++ M GH + V V + P+ + SAS DK++++W + G
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ T GH + V + S D L+ S S D T +VWS+ TK+ EL GH V V W
Sbjct: 408 QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDW 467
Query: 283 AP 284
AP
Sbjct: 468 AP 469
Score = 231 (86.4 bits), Expect = 9.0e-17, P = 9.0e-17
Identities = 47/140 (33%), Positives = 76/140 (54%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ SCS+D T+ LW + + GH + V D+ + KL+ S S D S++LW S
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
Q + T +GH V VA+ +S ++S S+D T+K+W V T + L GH + V +
Sbjct: 408 QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDW 467
Query: 241 SPDGTLLASCSNDHTARVWS 260
+PDG+ +AS D ++W+
Sbjct: 468 APDGSRVASGGKDKVIKLWA 487
Score = 229 (85.7 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 56/175 (32%), Positives = 90/175 (51%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE-RALHGHLDSVQDIAF-- 156
F +GH+ V+ V + P +AS + +I +WD ETG+ + R L GH + +A+
Sbjct: 155 FTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEP 214
Query: 157 ---DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
D + L S S D ++WD+ QCL + GH + VT V + + + ++S+D+T
Sbjct: 215 YHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRW-GGAGLIYTSSKDRT 273
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN---DHTARVWSLATKE 265
+KMW A G +T +GH WV I +S D L + D + SL+T+E
Sbjct: 274 VKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEE 328
Score = 213 (80.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 41/116 (35%), Positives = 66/116 (56%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
++GH++ V V + P L+AS S D ++RLW G+Y GH+ +V +A+ +
Sbjct: 371 MTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSR 430
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
L+VS S D +LK+W + T + + + GH V GV + P+ V S +DK IK+W
Sbjct: 431 LIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 204 (76.9 bits), Expect = 2.1e-24, Sum P(2) = 2.1e-24
Identities = 57/188 (30%), Positives = 88/188 (46%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
++ GH V+ + F P + +AS S D T+RLWD T GH V +++ G
Sbjct: 114 SMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDG 173
Query: 161 KLLVS-CSADMSLKLWDMSTYQCL-KTMQGHDHNVTGVAFLP-NSD----FVLSASRDKT 213
K L S C A S+ +WD T Q + + GH ++ +A+ P + D + SAS D
Sbjct: 174 KRLASGCKAG-SIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGD 232
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
++W+V G C+ + GH V ++ G + S S D T ++W A GH
Sbjct: 233 CRIWDVKLGQCLMNIAGHTNAVTAVRWGGAGLIYTS-SKDRTVKMWRAADGILCRTFSGH 291
Query: 274 DHTVECVA 281
H V +A
Sbjct: 292 AHWVNNIA 299
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 56/186 (30%), Positives = 83/186 (44%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
C ++ GH E V + SPDG LAS S D T R+W L T+ GH V CV+WA
Sbjct: 111 CTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWA 170
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT-LIGHDNWVRGVT- 341
P LA+G + +I +WD +G L GH + +
Sbjct: 171 PD------------------GKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAW 212
Query: 342 --FH--PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397
+H P + L S D R+WD + + + H++ VT++ + A + T S D
Sbjct: 213 EPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAG-LIYTSSKD 271
Query: 398 KTVKVW 403
+TVK+W
Sbjct: 272 RTVKMW 277
Score = 167 (63.8 bits), Expect = 4.9e-20, Sum P(2) = 4.9e-20
Identities = 58/230 (25%), Positives = 103/230 (44%)
Query: 92 WIPRAPEKFA--LSGHRSPVIKVI---FH--PVFSLMASCSEDATIRLWDYETGEYERAL 144
W P ++ LSGH+ + + +H P +AS S D R+WD + G+ +
Sbjct: 188 WDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQCLMNI 247
Query: 145 HGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDF 204
GH ++V + + +G L+ + S D ++K+W + +T GH H V +A ++D+
Sbjct: 248 AGHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIAL--STDY 304
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK-VSPDGT-LLASCSNDHTARVWSLA 262
VL +K + + T +++ + V PD L SCS+D+T +W
Sbjct: 305 VLRTGPFHPVKD-RSKSHLSLSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNN 363
Query: 263 TKETKAELRGHDHTVECVAWAPGV---ASESISEAAXXXXXXXXXXYLAT 309
+ + GH + V V ++P V AS S ++ Y+AT
Sbjct: 364 QNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQ-YMAT 412
Score = 143 (55.4 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+++LW G + T GH V V + + +VS D TL+VW K
Sbjct: 390 IASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK 449
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + L H+ V +D+ V +G DK +K+W
Sbjct: 450 KLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 140 (54.3 bits), Expect = 3.5e-27, Sum P(2) = 3.5e-27
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L + S D T+ LW + + GH N V V + P K + S DK++R+W ++
Sbjct: 348 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 407
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ M T H V ++ + +V+GS D T+KVW
Sbjct: 408 QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVW 444
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 91/314 (28%), Positives = 143/314 (45%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH VI V F P +AS S D T+R WD T GH V I++ G
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 119
Query: 161 KLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLP---NSD--FVLSASRDKTI 214
K L S + + LWD ST Q + + GH +TG+++ P N + ++ S+S+D ++
Sbjct: 120 KTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSV 179
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W+ G C + LTGH + V ++ DG LL S S D T +VW L+GH
Sbjct: 180 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHG 238
Query: 275 HTVECVAWAPGVASESIS-EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
H V +A + A + + E A +D+ ++ +
Sbjct: 239 HWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRY-------------- 284
Query: 334 DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
N VRG G + LVS DD TL +W A +K+ + + H + + F +
Sbjct: 285 -NLVRG----QGPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIA 339
Query: 393 TGSVDKTVKVWECR 406
+ S DK++K+W+ R
Sbjct: 340 SASFDKSIKLWDGR 353
Score = 284 (105.0 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 83/315 (26%), Positives = 141/315 (44%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFDQ 158
F GHR V+ + + P +AS ++ I LWD TG + R L GH + ++++
Sbjct: 101 FTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEP 160
Query: 159 -----SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDK 212
+ + S S D S+++WD + +C + + GH +VT + + D +L SAS+D+
Sbjct: 161 LHANPECRYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW--GGDGLLYSASQDR 218
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
TIK+W G +TL GH WV + +S D L A + + + + EL+
Sbjct: 219 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELK- 277
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLI 331
D + G E L +GS D T+ +W L +
Sbjct: 278 -DRALRRYNLVRGQGPER----------------LVSGSDDFTLFMWSPAEDKKPLARMT 320
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
GH + V F P + + S DK++++WD + + +L H V + + +
Sbjct: 321 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 380
Query: 392 VTGSVDKTVKVWECR 406
V+GS D T+KVW+ +
Sbjct: 381 VSGSSDSTLKVWDVK 395
Score = 256 (95.2 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 62/204 (30%), Positives = 99/204 (48%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C +++GH V VAF P ++ S S D T++ W+++T T GHR WV I
Sbjct: 56 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 115
Query: 241 SPDGTLLAS-CSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
SPDG LAS C N +W +T K+ L GH + ++W P A+
Sbjct: 116 SPDGKTLASGCKNGQIL-LWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECR------ 168
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y+A+ S+D ++++WD +G L GH V + + G L S D+T+
Sbjct: 169 -------YMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTI 220
Query: 359 RVWDTANKRNMKTLEAHSHFVTSL 382
+VW + +TL+ H H+V ++
Sbjct: 221 KVWRAHDGVLCRTLQGHGHWVNTM 244
Score = 226 (84.6 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 46/128 (35%), Positives = 76/128 (59%)
Query: 92 WIPRAPEK-FA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P +K A ++GH++ + +V+F P ++AS S D +I+LWD TG+Y +L GH+
Sbjct: 307 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 366
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA+ +LLVS S+D +LK+WD+ + + GH V V + P+ V S
Sbjct: 367 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGG 426
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 427 KDKCLRIW 434
Score = 214 (80.4 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 60/171 (35%), Positives = 85/171 (49%)
Query: 125 SEDATIRLWDYETGEYE---RALHGHLDSVQDIAF-------DQSGKLLVSCSADMSLKL 174
S D +R +E E + L G L ++D A Q + LVS S D +L +
Sbjct: 247 STDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFM 306
Query: 175 WDMST-YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + + L M GH + V F P+S + SAS DK+IK+W+ TG + +L GH
Sbjct: 307 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 366
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
V QI S D LL S S+D T +VW + ++ A+L GH V V W+P
Sbjct: 367 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP 417
Score = 201 (75.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 44/140 (31%), Positives = 72/140 (51%)
Query: 121 MASCSEDATIRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D T+ +W + A + GH + + F +++ S S D S+KLWD T
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L +++GH V +A+ +S ++S S D T+K+W+V L GH + V +
Sbjct: 355 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVD 414
Query: 240 VSPDGTLLASCSNDHTARVW 259
SPDG +AS D R+W
Sbjct: 415 WSPDGQRVASGGKDKCLRIW 434
Score = 149 (57.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+IKLWD +G L +L GH V + + + LVS D TL+VWD +
Sbjct: 338 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 397
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H+ V ++D+ V +G DK +++W
Sbjct: 398 KLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 37 (18.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 262 ATKETKAELRGHDHTVECVAWAP 284
A + L GH V VA++P
Sbjct: 53 AVTRCTSSLEGHSEAVISVAFSP 75
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 223 (83.6 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 45/162 (27%), Positives = 85/162 (52%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 122 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 181
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++D+ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 182 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 241
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V T CV T H++ V +K + +G+ + S +D ++
Sbjct: 242 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
Score = 211 (79.3 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
F P +A+ + + ++ E+G+ E +L + IA+ GK L S + D +
Sbjct: 96 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 155
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
++D++T + L T++GH + + F P+S +++AS D IK+++V TL+GH
Sbjct: 156 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 215
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + PD T S S+D + +VW + T+
Sbjct: 216 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 246
Score = 197 (74.4 bits), Expect = 6.5e-14, P = 6.5e-14
Identities = 65/239 (27%), Positives = 105/239 (43%)
Query: 180 YQCL-KTMQGHDHNVTGVAF----LPNSDFVLSASRDKTIKMWEVATGYCVK--TLTGHR 232
Y L K Q HD + VA+ NS+ V++ S D +K+W+ +L GH+
Sbjct: 5 YSILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQ 64
Query: 233 EWVRQIKV--SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT--VECVAWAPGVAS 288
V +++ +G + S W+LA L H V G
Sbjct: 65 LGVVSVRLWDLENGKQIKSIDAG-PVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE 123
Query: 289 ESISEAAXXXXXXXXX---XYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPG 345
S+ YLA+G+ D I ++D+ +G LL TL GH +R +TF P
Sbjct: 124 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 183
Query: 346 GKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ LV+ DD ++++D + TL H+ +V ++ F + V+ S DK+VKVW+
Sbjct: 184 SQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 242
Score = 175 (66.7 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I+++D + L GH V ++AF
Sbjct: 168 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 227
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+ T C+ T H V GV + N ++S D+ I +++
Sbjct: 228 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 158 (60.7 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 38/157 (24%), Positives = 79/157 (50%)
Query: 129 TIRLWDYETGEYERALH-GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ 187
++RLWD E G+ +++ G +D+ +AF + L + + + ++ + + + ++
Sbjct: 69 SVRLWDLENGKQIKSIDAGPVDA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD 127
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247
+ +A+ P+ ++ S + D I ++++ATG + TL GH +R + SPD LL
Sbjct: 128 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 187
Query: 248 ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+ S+D +++ + L GH V VA+ P
Sbjct: 188 VTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP 224
Score = 148 (57.2 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV +L TL GH +WV V F P + VS DK+++VWD +
Sbjct: 187 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 246
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + ++ +V+ D+ + +++C
Sbjct: 247 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 285
Score = 120 (47.3 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDVG+ + + T H + V GV ++ G +VS GDD+ + ++D
Sbjct: 228 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 284
Score = 118 (46.6 bits), Expect = 2.8e-16, Sum P(2) = 2.8e-16
Identities = 27/115 (23%), Positives = 59/115 (51%)
Query: 170 MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT 229
+S++LWD+ + +K++ + +AF P+S ++ + + + ++ V +G +L
Sbjct: 68 VSVRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD 127
Query: 230 GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+++ I SPDG LAS + D ++ +AT + L GH + + ++P
Sbjct: 128 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 182
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 88/283 (31%), Positives = 130/283 (45%)
Query: 99 KFALS-GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIA 155
K LS GH+ V KV + P + +AS S DAT +W ++E L GH + V+ +A
Sbjct: 53 KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVA 112
Query: 156 FDQSGKLLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK 212
+ SG LL +CS D S+ +W++ Y+C+ + H +V V + P+ + + SAS D
Sbjct: 113 WAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172
Query: 213 TIKMW--EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS--LATKETKA 268
T+K++ E C TL GH V + P G LASCS+D T R+W L E
Sbjct: 173 TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232
Query: 269 ELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS--- 325
G D + +C+ G S +I + A LAT D I+++ S
Sbjct: 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGA----LATACGDDAIRVFQEDPNSDPQ 288
Query: 326 -LLFTLIGH-----DNWVRGVTFHPGGK-YLVSCGDDKTLRVW 361
F+L H V V ++P L SC DD + W
Sbjct: 289 QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFW 331
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 69/218 (31%), Positives = 109/218 (50%)
Query: 154 IAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTM-QGHDHNVTGVAFLPNSDFVLSASR 210
+A++ +G LL SC D +++W + ++ C + +GH V VA+ P +++ SAS
Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 211 DKTIKMWEVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK---E 265
D T +W+ CV TL GH V+ + +P G LLA+CS D + VW + + E
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW--DVGS 323
+ L H V+ V W P S+ + LA+ S D T+KL+ +
Sbjct: 142 CVSVLNSHTQDVKHVVWHP---SQEL---------------LASASYDDTVKLYREEEDD 183
Query: 324 GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
TL GH++ V + F P G+ L SC DD+T+R+W
Sbjct: 184 WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 81/286 (28%), Positives = 134/286 (46%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEY--ERAL-HGHLDSVQDIAFDQSGKLLVSCSADM 170
++P +L+ASC D IR+W E + + L GH +V+ +A+ G L S S D
Sbjct: 24 WNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA 83
Query: 171 SLKLW--DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV--ATGY-CV 225
+ +W + ++C+ T++GH++ V VA+ P+ + + + SRDK++ +WEV Y CV
Sbjct: 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECV 143
Query: 226 KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWA 283
L H + V+ + P LLAS S D T +++ + A L GH+ TV +A+
Sbjct: 144 SVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFD 203
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTF 342
P + + ++ + YL + D S + TL G H + + +
Sbjct: 204 P--SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDP-SWKCICTLSGFHSRTIYDIAW 260
Query: 343 -HPGGKYLVSCGDDKTLRVW--DTANKRNMKT--LEAHSHFVTSLD 383
G +CGDD +RV+ D + T L AH H S D
Sbjct: 261 CQLTGALATACGDD-AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQD 305
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 66/218 (30%), Positives = 102/218 (46%)
Query: 196 VAFLPNSDFVLSASRDKTIKMW--EVATGYCVKTLT-GHREWVRQIKVSPDGTLLASCSN 252
+A+ P + S D+ I++W E + C L+ GH+ VR++ SP G LAS S
Sbjct: 22 LAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81
Query: 253 DHTARVWSLATK--ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATG 310
D T +W E L GH++ V+ VAWAP S ++ LAT
Sbjct: 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP---SGNL---------------LATC 123
Query: 311 SRDKTIKLWDVGSGS---LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
SRDK++ +W+V + L H V+ V +HP + L S D T++++
Sbjct: 124 SRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDD 183
Query: 368 NM--KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ TLE H V SL F + + + S D+TV++W
Sbjct: 184 WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
Identities = 34/104 (32%), Positives = 51/104 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLI---GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT 363
LA+ D+ I++W S + + GH VR V + P G YL S D T +W
Sbjct: 31 LASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKK 90
Query: 364 ANKRNMK---TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
N+ + + TLE H + V S+ + + + T S DK+V VWE
Sbjct: 91 -NQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWE 133
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 314 (115.6 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 77/246 (31%), Positives = 115/246 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+A+ S D R+W + G L H + + +++ G ++S D + +WD S
Sbjct: 423 SLLATGSYDGYARIWKTD-GRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDAS 481
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T QC + H V + N F S S D+ I + + +KT GH V I
Sbjct: 482 TGQCTQQFAFHSAPALDVDWQTNQAFA-SCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAI 540
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ +L+ H + + W+P G + + +
Sbjct: 541 KWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPN----- 595
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWDV GS + TL H V V F P GK+L S DK
Sbjct: 596 -----TNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKC 650
Query: 358 LRVWDT 363
+ +W T
Sbjct: 651 VHIWST 656
Score = 262 (97.3 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 65/194 (33%), Positives = 95/194 (48%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++FA H +P + V + ASCS D I + E + GH + V I +
Sbjct: 487 QQFAF--HSAPALDVDWQ-TNQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWC 543
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP--------NSDFVL-SA 208
G+LL SCS DM+LK+W M+ +C +Q H + + + P N++ +L SA
Sbjct: 544 PQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASA 603
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
S D T+++W+V G C+ TLT H E V + SPDG LAS S D +WS T +
Sbjct: 604 SFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVH 663
Query: 269 ELRGHDHTVECVAW 282
+G E V W
Sbjct: 664 SYKGTGGIFE-VCW 676
Score = 239 (89.2 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 84/333 (25%), Positives = 133/333 (39%)
Query: 93 IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE---TGEYERAL-H--- 145
IP + + L GH S V ++P L+AS S D+T R+WD T + L H
Sbjct: 343 IPESKAR-VLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQ 401
Query: 146 ---GHLDSVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL 199
+ S +D+ ++ G LL + S D ++W + T+ H + + +
Sbjct: 402 KGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDG-RLASTLGQHKGPIFALKWN 460
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+++LSA DKT +W+ +TG C + H + + ASCS D V
Sbjct: 461 KCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAF-ASCSTDQRIHVC 519
Query: 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW 319
L E +GH + V + W P LA+ S D T+K+W
Sbjct: 520 RLGVNEPIKTFKGHTNEVNAIKWCP------------------QGQLLASCSDDMTLKIW 561
Query: 320 DVGSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMK 370
+ L H + + + P G L S D T+R+WD +
Sbjct: 562 SMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIH 621
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
TL H+ V S+ F ++ +GS DK V +W
Sbjct: 622 TLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIW 654
Score = 201 (75.8 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 53/231 (22%), Positives = 99/231 (42%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TG+ + H D+ + Q+ +
Sbjct: 447 LGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDW-QTNQ 505
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS D + + + + +KT +GH + V + + P + S S D T+K+W +
Sbjct: 506 AFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNR 565
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
C L H + + IK SP G +N +T + + A+ ++ L + C+
Sbjct: 566 DRCCHDLQAHSKEIYTIKWSPTGP---GTNNPNTNLILASASFDSTVRLWDVERG-SCIH 621
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
+E +LA+GS DK + +W +G L+ + G
Sbjct: 622 -----TLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSYKG 667
Score = 167 (63.8 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 72/280 (25%), Positives = 116/280 (41%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVT-GVAFLP 200
R L GH V A++ S LL S S D + ++WDMS H + G A +P
Sbjct: 349 RVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVP 408
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGH-REWVRQIKVSPDGTLLASCSNDHTARVW 259
++ V S + + +ATG + G+ R W DG L AS H ++
Sbjct: 409 SNKDVTSLDWNCDGSL--LATG----SYDGYARIW------KTDGRL-ASTLGQHKGPIF 455
Query: 260 SLATKETKAEL--RGHDHTVECVAW--APGVASESIS--EAAXXXXXXXXXXYLATGSRD 313
+L + + G D T + W + G ++ + A A+ S D
Sbjct: 456 ALKWNKCGNYILSAGVDKTT--IIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTD 513
Query: 314 KTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
+ I + +G + T GH N V + + P G+ L SC DD TL++W R L+
Sbjct: 514 QRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQ 573
Query: 374 AHSHFVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
AHS + ++ + P + + S D TV++W+
Sbjct: 574 AHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWD 613
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 264 (98.0 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 61/183 (33%), Positives = 97/183 (53%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH V + F+ + LM S D TI++W ++GE + L GH V+ + FD +
Sbjct: 380 TGHSDGVTCLQFNRKY-LMTG-SYDTTIKIWKIDSGECVKTLTGHTKGVRALVFDN--QK 435
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L+S D ++K+W+ T QC+ T +GH+ V V F S ++S S D T+++W V +
Sbjct: 436 LISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWHVDSR 493
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET-KA----ELRGHDHTV 277
C TL GH +WV +K+ + S S+D T R+W + + E K E GH V
Sbjct: 494 TCY-TLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQV 552
Query: 278 ECV 280
+C+
Sbjct: 553 QCI 555
Score = 184 (69.8 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 40/98 (40%), Positives = 56/98 (57%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL TGS D TIK+W + SG + TL GH VR + F + L+S G D T++VW+
Sbjct: 395 YLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRALVFD--NQKLISGGLDSTIKVWNYHT 452
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + T H V S+DF + +V+GS D TV+VW
Sbjct: 453 GQCIATYRGHEDAVVSVDF--TNKSIVSGSADHTVRVW 488
Score = 180 (68.4 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 47/142 (33%), Positives = 66/142 (46%)
Query: 173 KLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHR 232
K W T+ +KT GH VT + F N ++++ S D TIK+W++ +G CVKTLTGH
Sbjct: 367 KNWRKGTHT-IKTFTGHSDGVTCLQF--NRKYLMTGSYDTTIKIWKIDSGECVKTLTGHT 423
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA-PGVASESI 291
+ VR + D L S D T +VW+ T + A RGH+ V V + + S S
Sbjct: 424 KGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKSIVSGSA 481
Query: 292 SEAAXXXXXXXXXXYLATGSRD 313
Y G D
Sbjct: 482 DHTVRVWHVDSRTCYTLRGHTD 503
Score = 148 (57.2 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +G D TIK+W+ +G + T GH++ V V F K +VS D T+RVW +
Sbjct: 436 LISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFT--NKSIVSGSADHTVRVWHV-DS 492
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R TL H+ +V + H A + + S D T+++W+
Sbjct: 493 RTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWD 530
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 254 HTARVWSLATKETKAELRGHDHTVECVAWAPG--VASESISEAAXXXXXXXXXXYLATGS 311
HT V +L K G D T++ + G +A+ E A + +GS
Sbjct: 422 HTKGVRALVFDNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS-IVSGS 480
Query: 312 RDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKT 371
D T+++W V S + +TL GH +WV V H + S DD T+R+WD + +K
Sbjct: 481 ADHTVRVWHVDSRTC-YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKV 539
Query: 372 ---LEAHSH 377
+E + H
Sbjct: 540 FGGMENNGH 548
Score = 122 (48.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 32/98 (32%), Positives = 50/98 (51%)
Query: 185 TMQGHDHNVTGVAFLPNS--DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
T ++N A PNS L+++ D TIK+W+VATG C++T GH E V I +
Sbjct: 619 TFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLWDVATGKCIRTQFGHIEGVWSI--AA 676
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
D + S ++D +VW L + ++ +V CV
Sbjct: 677 DTFRIISGAHDRLIKVWDLQNGKCLHTF-SNNSSVSCV 713
Score = 120 (47.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 25/89 (28%), Positives = 51/89 (57%)
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++ + D ++KLWD++T +C++T GH V +A ++ ++S + D+ IK+W++ G
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIA--ADTFRIISGAHDRLIKVWDLQNGK 699
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSN 252
C+ T + + V + +S D +A N
Sbjct: 700 CLHTFSNNSS-VSCVGLS-DSRFVAGLEN 726
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00069
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D TI+LWD TG+ R GH++ V IA D ++S + D +K+WD+ +CL T
Sbjct: 647 DNTIKLWDVATGKCIRTQFGHIEGVWSIAADTFR--IISGAHDRLIKVWDLQNGKCLHTF 704
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+ +V+ V L +S FV + +KM+
Sbjct: 705 SNNS-SVSCVG-LSDSRFVAGLENGE-VKMY 732
Score = 103 (41.3 bits), Expect = 3.2e-27, Sum P(2) = 3.2e-27
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY-LVSCGDDKTLRVWDTA 364
+ T + D TIKLWDV +G + T GH + GV + ++S D+ ++VWD
Sbjct: 640 HFLTSALDNTIKLWDVATGKCIRTQFGH---IEGVWSIAADTFRIISGAHDRLIKVWDLQ 696
Query: 365 NKRNMKTLEAHS 376
N + + T +S
Sbjct: 697 NGKCLHTFSNNS 708
Score = 80 (33.2 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL-----HGHLDSVQDI 154
+ L GH V V H + + S S+D TIR+WD + E + +GH+ VQ I
Sbjct: 496 YTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQVQCI 555
Score = 73 (30.8 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 355 DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY-VVTGSVDKTVKVWE 404
D T+++WD A + ++T H V S+ A + +++G+ D+ +KVW+
Sbjct: 647 DNTIKLWDVATGKCIRTQFGHIEGVWSI---AADTFRIISGAHDRLIKVWD 694
Score = 51 (23.0 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 362 DTANKRNMKTLEAHSHFVTSLDFHRAHP-YVVTGSVDKTVKVWE 404
DTA ++++ T+ ++P + +T ++D T+K+W+
Sbjct: 611 DTATINRSTFTPSNNNTATTATTPNSYPTHFLTSALDNTIKLWD 654
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 255 (94.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 55/183 (30%), Positives = 92/183 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H V KV FHP +A+ D+T R++D T + GH SV D+AF G
Sbjct: 292 LEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGS 351
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ ++ D ++WDM T +C+ + GH + V ++PN +++ S D ++K+W++
Sbjct: 352 VALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRM 411
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
T+ H V +++ G L S S D T ++WS + +L+GHD + CV
Sbjct: 412 RRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVD 471
Query: 282 WAP 284
+P
Sbjct: 472 ISP 474
Score = 227 (85.0 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 71/275 (25%), Positives = 117/275 (42%)
Query: 14 AVADYLLSNGYLSALEGFKKDADLPAEVEKKYSGLLEKKWTSVIRLQ-KKVIXXXXXXXX 72
++AD+ L L L+ +++A PA EK + KW I L +V
Sbjct: 153 SIADFSLRKAKLR-LDKAREEAARPAH-EKALARQEAHKWVQQINLHASQVADTRPVAFC 210
Query: 73 XXXXYVEGAPTRA-KRSPTEWI-PRAPEKFALSGHRSPVIKVIFHP-VF------SL-MA 122
E T S W + ++ GH S FHP F SL +
Sbjct: 211 EFSADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVV 270
Query: 123 SCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182
SCS D T+ LW L H V +AF +G L + D + +++D++T +
Sbjct: 271 SCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKE 330
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
L +GH +V VAF P+ L+ D ++W++ TG C+ L GH + + ++ P
Sbjct: 331 LLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMP 390
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+G + + S+D++ +VW L + + H V
Sbjct: 391 NGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVV 425
Score = 224 (83.9 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 49/157 (31%), Positives = 78/157 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH V V FHP S+ + D R+WD TG L GH + + + +G +
Sbjct: 336 GHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEM 395
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++ S+D S+K+WD+ + TM H VT V +++SAS D T+KMW
Sbjct: 396 ITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQ 455
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
++ L GH + + +SPDG + S + D T ++W+
Sbjct: 456 PLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWA 492
Score = 171 (65.3 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 39/128 (30%), Positives = 62/128 (48%)
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
D S +VSCS D ++ LW +S + ++ H V+ VAF PN + +A D T +M
Sbjct: 263 DYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRM 322
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
+++ T + GH + V + PDG++ + +D RVW + T L GH
Sbjct: 323 YDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKE 382
Query: 277 VECVAWAP 284
+ V W P
Sbjct: 383 IHSVEWMP 390
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 35/116 (30%), Positives = 60/116 (51%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + V + P M + S D ++++WD + H V + D +G+
Sbjct: 376 LDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQ 435
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
LVS S D +LK+W + +Q L+ +QGHD + V P+ ++ S++ D+T K+W
Sbjct: 436 YLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
Score = 161 (61.7 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 31/95 (32%), Positives = 52/95 (54%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368
TG D ++WD+ +G + L GH + V + P G +++ D +++VWD +RN
Sbjct: 355 TGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRN 414
Query: 369 MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
T+ AH+ VT + A Y+V+ S D T+K+W
Sbjct: 415 TYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMW 449
Score = 145 (56.1 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LAT D T +++D+ + L GH V V FHP G ++ G D RVWD
Sbjct: 310 HLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRT 369
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R + L+ H+ + S+++ ++TGS D ++KVW+ R
Sbjct: 370 GRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLR 410
Score = 143 (55.4 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
Identities = 28/97 (28%), Positives = 51/97 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D ++K+WD+ +T+ H + V V G+YLVS D TL++W T
Sbjct: 395 MITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGW 454
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ ++ L+ H + +D ++ + + D+T K+W
Sbjct: 455 QPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
Score = 143 (55.4 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 41/166 (24%), Positives = 65/166 (39%)
Query: 241 SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXX 300
S D + + + VW + + GH C + PG +++
Sbjct: 213 SADSEHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQN---------- 262
Query: 301 XXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRV 360
+ + S D T+ LW + S + L H V V FHP G +L + D T R+
Sbjct: 263 DYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRM 322
Query: 361 WDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+D K+ + E HS V + FH +TG D +VW+ R
Sbjct: 323 YDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMR 368
Score = 95 (38.5 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
YL + S D T+K+W L L GHD + V P G+++ S D+T ++W
Sbjct: 436 YLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 83/287 (28%), Positives = 141/287 (49%)
Query: 99 KFALSGHRSPVIKVIFHPVFS--LMASCSEDATIRLW-----DYETGEYERALHGHLDSV 151
K + H + ++ I PV + ++ + S D +I LW D G +R + GH V
Sbjct: 8 KGTMCAH-TDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
QD+ G+ +S S D L+LWD++T + + GH +V VAF ++ ++SASRD
Sbjct: 67 QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 212 KTIKMWEVATGYCVKTLT---GHREWVRQIKVSPDGTL--LASCSNDHTARVWSLATKET 266
+TIK+W G C T++ GH+EWV ++ SP+ + + S S D T +VW+L +
Sbjct: 127 RTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL 185
Query: 267 KAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL 326
+ L GH + VA +P A+G +D I LWD+ G
Sbjct: 186 RNTLAGHSGYLNTVAVSPD------------------GSLCASGGKDGVILLWDLAEGKK 227
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
L++L + + + F P +Y + + ++R+WD +K ++ L+
Sbjct: 228 LYSLEA-GSIIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 78/266 (29%), Positives = 123/266 (46%)
Query: 147 HLDSVQDIAFD-QSGKLLVSCSADMSLKLW-----DMSTYQCLKTMQGHDHNVTGVAFLP 200
H D V IA + ++V+ S D S+ LW D S + M GH H V V
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSS 73
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ F LS S D +++W++ATG + GH + V + S D + S S D T ++W+
Sbjct: 74 DGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 261 LA--TKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
K T +E GH V CV ++P +I A S DKT+K+
Sbjct: 134 TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSA----------------SWDKTVKV 177
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
W++ + L TL GH ++ V P G S G D + +WD A + + +LEA S
Sbjct: 178 WNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-I 236
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ SL F + Y + + + ++++W+
Sbjct: 237 IHSLCFS-PNRYWLCAATENSIRIWD 261
Score = 179 (68.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 53/225 (23%), Positives = 100/225 (44%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH---GHLDSVQDIAFDQSG 160
GH V+ V F + S S D TI+LW+ GE + + GH + V + F +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNT 161
Query: 161 KL--LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ +VS S D ++K+W++ + T+ GH + VA P+ S +D I +W+
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH-DHTV 277
+A G + +L + + SP+ L + + +++ R+W L +K +L+
Sbjct: 222 LAEGKKLYSLEAG-SIIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVEDLKVDLKAEA 279
Query: 278 ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVG 322
E + G+ +++ L +G D I++W +G
Sbjct: 280 EKTDGSTGIGNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGIG 324
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 82/287 (28%), Positives = 141/287 (49%)
Query: 99 KFALSGHRSPVIKVIFHPVFS--LMASCSEDATIRLW-----DYETGEYERALHGHLDSV 151
K + H + ++ I P+ + ++ + S D +I LW D G +R L GH V
Sbjct: 8 KGIMRAH-TDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
+D+ G+ +S S D L+LWD++T + + GH +V VAF ++ ++SASRD
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 212 KTIKMWEVATGYCVKTLT---GHREWVRQIKVSPDGTL--LASCSNDHTARVWSLATKET 266
+TIK+W G C T++ GH+EWV ++ SP+ + + S S D T +VW+L +
Sbjct: 127 RTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKL 185
Query: 267 KAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL 326
+ L GH + VA +P A+G +D I LWD+ G
Sbjct: 186 RNSLVGHSGYLNTVAVSPD------------------GSLCASGGKDGVILLWDLAEGKK 227
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
L++L + + + F P +Y + + ++R+WD +K ++ L+
Sbjct: 228 LYSLEA-GSIIHSLCFSPN-RYWLCAATENSIRIWDLESKSVVEDLK 272
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 78/270 (28%), Positives = 127/270 (47%)
Query: 144 LHGHLDSVQDIA--FDQSGKLLVSCSADMSLKLW----DMSTYQCL-KTMQGHDHNVTGV 196
+ H D V IA D S ++V+ S D S+ LW D +Y + + GH H V V
Sbjct: 11 MRAHTDIVTAIATPIDNSD-IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
+ F LS S D +++W++ATG + GH + V + S D + S S D T
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTI 129
Query: 257 RVWSLA--TKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDK 314
++W+ K T +E GH V CV ++P +I A S DK
Sbjct: 130 KLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSA----------------SWDK 173
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
T+K+W++ + L +L+GH ++ V P G S G D + +WD A + + +LEA
Sbjct: 174 TVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
S + SL F + Y + + + ++++W+
Sbjct: 234 GS-IIHSLCFS-PNRYWLCAATENSIRIWD 261
Score = 171 (65.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 53/226 (23%), Positives = 100/226 (44%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH---GHLDSVQDIAFDQSG 160
GH V+ V F + S S D TI+LW+ GE + + GH + V + F +
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNT 161
Query: 161 KL--LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ +VS S D ++K+W++ + ++ GH + VA P+ S +D I +W+
Sbjct: 162 LVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD 221
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVE 278
+A G + +L + + SP+ L + + +++ R+W L +K +L+ D E
Sbjct: 222 LAEGKKLYSLEAG-SIIHSLCFSPNRYWLCAAT-ENSIRIWDLESKSVVEDLKV-DLKSE 278
Query: 279 CVAWAPGVASESISEA--AXXXXXXXXXXYLATGSRDKTIKLWDVG 322
GV + + + L +G D +++W +G
Sbjct: 279 AEKNEGGVGTGNQKKVIYCTSLNWSADGSTLFSGYTDGVVRVWGIG 324
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 257 (95.5 bits), Expect = 4.1e-27, Sum P(2) = 4.1e-27
Identities = 51/164 (31%), Positives = 84/164 (51%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E L GH V V P +A+ S D TI++W T E L GH + + +
Sbjct: 46 EYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWA 105
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
K L S S D ++++WD ++ ++GH + V+ + F P ++S S D+T+++W
Sbjct: 106 TGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+ G C++ L H E + + +S DGTL A+ S D AR+W +
Sbjct: 166 NLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDV 209
Score = 224 (83.9 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 67/273 (24%), Positives = 120/273 (43%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + +V + +AS S+D TIR+WD+E R L GH + V I F+ G
Sbjct: 92 LFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGT 151
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
LLVS S D ++++W++ CL+ + H + V+ + +AS D ++W+V +
Sbjct: 152 LLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLS 211
Query: 222 GYCVKTLTGHREW-VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
G C+KTL + ++ + + L + + R+W H +T +
Sbjct: 212 GQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSM 271
Query: 281 AW----APGVA--SESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
+W + + +E++ S YL S D TI++ D + ++
Sbjct: 272 SWDCYSSKNIPKNTEALPNNDSSYPDDAESFMHDAYLLIPSEDGTIQITDPSTKIIIDDS 331
Query: 331 IGH--DNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
I H D + G ++++ G D +RVW
Sbjct: 332 IRHSDDPETSLLNVTSLGPFIITSGTDPYVRVW 364
Score = 212 (79.7 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 39/98 (39%), Positives = 63/98 (64%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++AT S D TIK+W + L TL GH + V + G KYL S DDKT+R+WD
Sbjct: 68 WIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEK 127
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ +++ L+ H+++V+S+DF+ +V+GS D+TV++W
Sbjct: 128 RCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Score = 204 (76.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 48/153 (31%), Positives = 79/153 (51%)
Query: 130 IRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG 188
IR ++ +G E L GH SV ++ + + + + S+D ++K+W T++ T+ G
Sbjct: 35 IRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFG 94
Query: 189 HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLA 248
H ++ V + S ++ SAS DKTI++W+ V+ L GH +V I +P GTLL
Sbjct: 95 HYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLV 154
Query: 249 SCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
S S D T R+W+L L H + V+
Sbjct: 155 SGSWDETVRIWNLQDGTCLRMLPAHSEPIISVS 187
Score = 165 (63.1 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 34/99 (34%), Positives = 53/99 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+ S DKTI++WD + L GH N+V + F+P G LVS D+T+R+W+ +
Sbjct: 110 YLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQD 169
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ L AHS + S+ T S D ++W+
Sbjct: 170 GTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWD 208
Score = 159 (61.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 34/100 (34%), Positives = 54/100 (54%)
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244
T+ GH+ +VT V+ PN ++ ++S D TIK+W T TL GH + Q+K +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 245 TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
LAS S+D T R+W + + L+GH + V + + P
Sbjct: 109 KYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNP 148
Score = 122 (48.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 25/101 (24%), Positives = 53/101 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS D+T+++W++ G+ L L H + V+ G + D R+WD +
Sbjct: 153 LVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSG 212
Query: 367 RNMKTL-EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +KTL E + +++L F Y++ +++ +++W+ R
Sbjct: 213 QCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYR 253
Score = 118 (46.6 bits), Expect = 0.00034, P = 0.00034
Identities = 25/92 (27%), Positives = 47/92 (51%)
Query: 314 KTIKLWDVGSG-SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
K I+ ++ SG S TL GH+ V V+ P +++ + D T+++W R TL
Sbjct: 33 KRIRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTL 92
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
H ++ + + Y+ + S DKT+++W+
Sbjct: 93 FGHYRGISQVKWATGSKYLASASDDKTIRIWD 124
Score = 114 (45.2 bits), Expect = 3.1e-17, Sum P(2) = 3.1e-17
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 212 KTIKMWEVATG---YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
K I+ +E +G YC TL GH + V + VSP+ +A+ S+D T ++WS T +
Sbjct: 33 KRIRNYESHSGFSEYC--TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLEC 90
Query: 269 ELRGHDHTVECVAWAPG 285
L GH + V WA G
Sbjct: 91 TLFGHYRGISQVKWATG 107
Score = 91 (37.1 bits), Expect = 4.1e-27, Sum P(2) = 4.1e-27
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
AT S D ++WDV SG L TL+ N + + F KYL+ + +R+WD
Sbjct: 196 ATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQIRLWDYRRN 255
Query: 367 RNMKTLEAH 375
R ++ ++H
Sbjct: 256 RVVRIFDSH 264
Score = 60 (26.2 bits), Expect = 7.1e-24, Sum P(2) = 7.1e-24
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 348 YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV-TSL-DFHRAHPYVVTGSVDKTVKVW 403
YL+ +D T+++ D + K + HS TSL + P+++T D V+VW
Sbjct: 307 YLLIPSEDGTIQITDPSTKIIIDDSIRHSDDPETSLLNVTSLGPFIITSGTDPYVRVW 364
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 308 (113.5 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 83/309 (26%), Positives = 134/309 (43%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P L+ + S +LW R L GH +V I+F
Sbjct: 214 GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLT 273
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
++S + SC+AD S+KLW + + + + ++GH V V + P+ F+ + D + +
Sbjct: 274 LEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWR 333
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH + V + PDG+L + D ARVW L T L GH
Sbjct: 334 LWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIK 393
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ + ++P ++ATGS D K+WD+ ++T+ H N
Sbjct: 394 EIYSINFSPN------------------GFHVATGSGDNACKVWDLRQRRCIYTIPAHQN 435
Query: 336 WVRGVTFHPG-GKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V V F P G YL++ D T ++W +KTL H V +D + T
Sbjct: 436 LVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATC 495
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 496 SYDRTFKLW 504
Score = 255 (94.8 bits), Expect = 1.3e-19, P = 1.3e-19
Identities = 63/211 (29%), Positives = 97/211 (45%)
Query: 78 VEGAPTRAKRSPTEWIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE 136
V A A S W + E A + GH V +V +HP + + D + RLWD E
Sbjct: 279 VNMASCAADGSVKLWSLDSDEPIADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLE 338
Query: 137 TGEYERALH--GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVT 194
E LH GH V D+ F G L + D ++WD+ T +C+ ++GH +
Sbjct: 339 V--QEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGRCVMFLEGHIKEIY 396
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP-DGTLLASCSND 253
+ F PN V + S D K+W++ C+ T+ H+ V +K P DG L + + D
Sbjct: 397 SINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYD 456
Query: 254 HTARVWSLATKETKAELRGHDHTVECVAWAP 284
+TA++W+ L GH+ V V +P
Sbjct: 457 NTAKIWTHPGWSPLKTLAGHEGKVMGVDLSP 487
Score = 247 (92.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 55/191 (28%), Positives = 92/191 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSL--------MASCSEDATIRLWDYETGEYERALHGHLDSVQD 153
L GH + V + FHP +L MASC+ D +++LW ++ E + GH V
Sbjct: 254 LRGHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDSDEPIADIEGHSMRVAR 313
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+ + SG+ L + D S +LWD+ + + +GH V + F P+ + D
Sbjct: 314 VTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSF 373
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
++W++ TG CV L GH + + I SP+G +A+ S D+ +VW L + + H
Sbjct: 374 ARVWDLRTGRCVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLRQRRCIYTIPAH 433
Query: 274 DHTVECVAWAP 284
+ V V + P
Sbjct: 434 QNLVSSVKFQP 444
Score = 193 (73.0 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 64/219 (29%), Positives = 93/219 (42%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247
G D ++ F PNS +++AS K+W+V ++TL GH V I P TL
Sbjct: 214 GDDRPISYCQFSPNSKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLT 273
Query: 248 ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYL 307
S+ + A S A + +L D E +A + S+ A +L
Sbjct: 274 LEESDVNMA---SCAA-DGSVKLWSLDSD-EPIA---DIEGHSMRVARVTWHPSGR--FL 323
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
T D + +LWD+ + GH V + FHP G + G D RVWD R
Sbjct: 324 GTTCYDHSWRLWDLEVQEEILHQEGHSKGVHDLHFHPDGSLAGTGGLDSFARVWDLRTGR 383
Query: 368 NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ LE H + S++F +V TGS D KVW+ R
Sbjct: 384 CVMFLEGHIKEIYSINFSPNGFHVATGSGDNACKVWDLR 422
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 221 (82.9 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 56/191 (29%), Positives = 100/191 (52%)
Query: 95 RAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQD 153
R ++AL GH+ V+ V P ++MAS S DA IRLWD E+G+ R++ G +D+
Sbjct: 53 RLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDA-WS 111
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+AF + L + S + ++ + T + ++ + +A+ P+ ++ S + D
Sbjct: 112 VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
I ++++ATG + TL GH +R + S D LL + S+D +++ + A L GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGH 231
Query: 274 DHTVECVAWAP 284
V VA++P
Sbjct: 232 GSWVLNVAFSP 242
Score = 221 (82.9 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 45/162 (27%), Positives = 85/162 (52%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++D+ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 200 TDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVW 259
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V+ CV T H++ V +K + +G+ + S +D V+
Sbjct: 260 DVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
Score = 207 (77.9 bits), Expect = 6.7e-24, Sum P(2) = 6.7e-24
Identities = 45/153 (29%), Positives = 80/153 (52%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P +A+ S + ++ ETG+ E +L + IA+ GK L S + D
Sbjct: 112 VAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+ ++D++T + L T++GH + + F +S +++AS D IK+++V TL+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGH 231
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + SPD S S+D + +VW ++ +
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSAR 264
Score = 173 (66.0 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 44/156 (28%), Positives = 78/156 (50%)
Query: 120 LMASCSEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177
L+ S S D +++W + E E + AL GH V + SG ++ S S D ++LWD+
Sbjct: 34 LVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDL 93
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
+ + ++++ + VAF P+S + + S + ++ V TG +L +++
Sbjct: 94 ESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILS 153
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
I SPDG LAS + D ++ +AT + L GH
Sbjct: 154 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGH 189
Score = 172 (65.6 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 35/99 (35%), Positives = 57/99 (57%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+G+ D I ++D+ +G LL TL GH +R +TF + LV+ DD ++++D +
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQH 221
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H +V ++ F + V+ S DK+VKVW+
Sbjct: 222 ASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWD 260
Score = 168 (64.2 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 35/117 (29%), Positives = 58/117 (49%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F L+ + S+D I+++D + L GH V ++AF
Sbjct: 186 LEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDA 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+S C+ T H V GV + N ++S D+ I +++
Sbjct: 246 HFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
Score = 162 (62.1 bits), Expect = 8.1e-24, Sum P(2) = 8.1e-24
Identities = 34/99 (34%), Positives = 53/99 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV SL TL GH +WV V F P + VS DK+++VWD + +
Sbjct: 205 LVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSAR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + ++R +V+ D+ + V++C
Sbjct: 265 TCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYDC 303
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 57/234 (24%), Positives = 100/234 (42%)
Query: 177 MST-YQCL-KTMQGHDHNVTGVAFLPNS----DFVLSASRDKTIKMWEVATGYCVKTLTG 230
MST Y L K H+ + V + NS + V+S S D +K+W+ + + L
Sbjct: 1 MSTQYSILFKQEHAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWK----WSDERL-- 54
Query: 231 HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASES 290
+W + G L S D + +A+ A +R D +E + +
Sbjct: 55 EMQWALE------GHQLGVVSVDVSPSGNIMASSSLDAHIRLWD--LESGKQIRSIDAGP 106
Query: 291 ISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV 350
+ A +LATGS + ++ V +G ++L ++ + + P GKYL
Sbjct: 107 VD--AWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA 164
Query: 351 SCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
S D + ++D A + + TLE H+ + SL F +VT S D +K+++
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYD 218
Score = 120 (47.3 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 34/148 (22%), Positives = 72/148 (48%)
Query: 145 HGHLDSVQDIAFDQSG----KLLVSCSADMSLKLWDMST--YQCLKTMQGHDHNVTGVAF 198
H H D++ + + ++ +L++S S D +K+W S + ++GH V V
Sbjct: 13 HAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDV 72
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P+ + + S+S D I++W++ +G ++++ + SPD LA+ S+ +
Sbjct: 73 SPSGNIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNI 132
Query: 259 WSLAT--KETKAELRGHDHTVECVAWAP 284
+ + T KE + RG + +A++P
Sbjct: 133 FGVETGKKEYSLDTRGK--FILSIAYSP 158
Score = 117 (46.2 bits), Expect = 7.0e-27, Sum P(2) = 7.0e-27
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDV + + + T + H + V GV ++ G +VS GDD+ + V+D
Sbjct: 246 HFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 307 (113.1 bits), Expect = 7.2e-27, P = 7.2e-27
Identities = 77/246 (31%), Positives = 115/246 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 252 TLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAH 310
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + + VKT GH V I
Sbjct: 311 TGEAKQQFPFHSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 369
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ +L+ H + + W+P G A+ + + +
Sbjct: 370 KWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIM- 428
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWDV G L TL H V V F P GKYL S DK
Sbjct: 429 ---------LASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 479
Query: 358 LRVWDT 363
+ +W+T
Sbjct: 480 VHIWNT 485
Score = 266 (98.7 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 67/187 (35%), Positives = 91/187 (48%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H +P + V + + ASCS D I + + GH + V I +D SG LL
Sbjct: 321 HSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 379
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNV-------TGVAFL-PNSDFVL-SASRDKTIK 215
SCS DM+LK+W M C+ +Q H + TG A PNS +L SAS D T++
Sbjct: 380 SCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVR 439
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G C+ TLT H+E V + SPDG LAS S D +W+ + RG
Sbjct: 440 LWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG 499
Query: 276 TVECVAW 282
E V W
Sbjct: 500 IFE-VCW 505
Score = 234 (87.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 86/331 (25%), Positives = 132/331 (39%)
Query: 97 PEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERAL-H----- 145
P K L GH S V ++PV L+AS S D+T R+W+ G + L H
Sbjct: 173 PSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 232
Query: 146 GH-LDSVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
GH + S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 233 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKK 291
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+++LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 292 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRL 350
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 351 GCDRPVKTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSM 392
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H + + + P G L S D T+R+WD + TL
Sbjct: 393 KQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTL 452
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 453 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 483
Score = 223 (83.6 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 61/231 (26%), Positives = 106/231 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + Q+
Sbjct: 276 LGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNT 334
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P+ + S S D T+K+W +
Sbjct: 335 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 394
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
CV L H + + IK SP G + SN +++ + + A+ ++ L + V C+
Sbjct: 395 DTCVHDLQAHSKEIYTIKWSPTGP---ATSNPNSSIMLASASFDSTVRLWDVERGV-CLH 450
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
E YLA+GS DK + +W+ SGSL+ + G
Sbjct: 451 -----TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG 496
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 65/276 (23%), Positives = 109/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G + +
Sbjct: 179 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN-----ENSNGGSTQLVLRHCIREGG 233
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
+ +++D T W + G + T G + +I DG L AS H +++L
Sbjct: 234 HDVPSNKDVTSLDWN-SDGTLLAT--GSYDGFARIWTE-DGNL-ASTLGQHKGPIFALKW 288
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 289 NKKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 346
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AHS
Sbjct: 347 VCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSK 406
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 407 EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD 442
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 85/276 (30%), Positives = 131/276 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH+ V KV + P + +AS S DAT +W + E+E L GH + V+ +A+ SG
Sbjct: 59 GHQRTVRKVSWSPCGNYLASASFDATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGS 118
Query: 162 LLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW- 217
LL +CS D S+ +W++ Y+C+ + H +V V + PN + + SAS D ++K++
Sbjct: 119 LLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYR 178
Query: 218 -EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW-SLATKETKAELRGHDH 275
E C TL GH V + G LA+CS+D T R+W L T E ++ D
Sbjct: 179 EEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSK---SDP 235
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW--DVGSGSL--LFTLI 331
+CV G + ++ + +AT D ++++ D GS L F+L
Sbjct: 236 NWKCVCTLTGYHTRTVYDVNWNHLTGA----IATACGDDAVRIFEEDPGSDPLQPTFSLT 291
Query: 332 GH-----DNWVRGVTFHPGG-KYLVSCGDDKTLRVW 361
H V VT+HP L SC DD + W
Sbjct: 292 AHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEMAFW 327
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 91/323 (28%), Positives = 149/323 (46%)
Query: 114 FHPVFSLMASCSEDATIRLW--DYETGEYERAL-HGHLDSVQDIAFDQSGKLLVSCSADM 170
++P +L+ASC D TIR+W D + + L GH +V+ +++ G L S S D
Sbjct: 24 WNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASFDA 83
Query: 171 SLKLW--DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV--ATGY-CV 225
+ +W ++C+ T++GH++ V VA+ P+ + + SRDK++ +WEV Y CV
Sbjct: 84 TTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECV 143
Query: 226 KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWA 283
L H + V+ + P+ LLAS S D + +++ + A L GH TV W+
Sbjct: 144 SVLNSHTQDVKHVVWHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTV----WS 199
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW-DVGSGS----------LLFTLIG 332
+A + E LAT S DKT+++W +G+G + TL G
Sbjct: 200 --LAFDQTGEQ------------LATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTLTG 245
Query: 333 -HDNWVRGVTF-HPGGKYLVSCGDDKTLRVW--DTANKRNMKTLE-------AHSHFVTS 381
H V V + H G +CGDD +R++ D + T AH+ V
Sbjct: 246 YHTRTVYDVNWNHLTGAIATACGDD-AVRIFEEDPGSDPLQPTFSLTAHMPRAHTQDVNC 304
Query: 382 LDFHRAHPYVVTG-SVDKTVKVW 403
+ +H P ++ S D + W
Sbjct: 305 VTWHPKEPNLLASCSDDGEMAFW 327
Score = 254 (94.5 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 77/273 (28%), Positives = 130/273 (47%)
Query: 154 IAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTM-QGHDHNVTGVAFLPNSDFVLSASR 210
+A++ SG LL SC D ++++W D + C + +GH V V++ P +++ SAS
Sbjct: 22 LAWNPSGTLLASCGGDRTIRIWGKDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASASF 81
Query: 211 DKTIKMW--EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK- 267
D T +W + C+ TL GH V+ + +P G+LLA+CS D + VW + +E
Sbjct: 82 DATTCIWMKKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYE 141
Query: 268 --AELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW--DVGS 323
+ L H V+ V W P ++ + LA+ S D ++KL+ +
Sbjct: 142 CVSVLNSHTQDVKHVVWHP---NQEL---------------LASASYDDSVKLYREEEDD 183
Query: 324 GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW------DTANKR--NMK---TL 372
TL GH + V + F G+ L +C DDKT+R+W + +K N K TL
Sbjct: 184 WVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTL 243
Query: 373 EA-HSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
H+ V ++++ + T D V+++E
Sbjct: 244 TGYHTRTVYDVNWNHLTGAIATACGDDAVRIFE 276
Score = 186 (70.5 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 48/146 (32%), Positives = 78/146 (53%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDY-ETGEYE--RALHGHLDSVQDIAFDQ 158
L GH + V V + P SL+A+CS D ++ +W+ E EYE L+ H V+ + +
Sbjct: 101 LEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHP 160
Query: 159 SGKLLVSCSADMSLKLW--DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ +LL S S D S+KL+ + + C T++GH V +AF + + + S DKT+++
Sbjct: 161 NQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDKTVRI 220
Query: 217 W-EVATGY----------CVKTLTGH 231
W ++ TG CV TLTG+
Sbjct: 221 WRQLGTGEQGSKSDPNWKCVCTLTGY 246
>TAIR|locus:2036823 [details] [associations]
symbol:AT1G62020 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0030244 "cellulose biosynthetic
process" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030126 EMBL:AC004392 EMBL:AY050400
EMBL:BT001048 IPI:IPI00528095 PIR:T02146 RefSeq:NP_176393.1
UniGene:At.48329 ProteinModelPortal:Q94A40 SMR:Q94A40 IntAct:Q94A40
STRING:Q94A40 PaxDb:Q94A40 PRIDE:Q94A40 EnsemblPlants:AT1G62020.1
GeneID:842497 KEGG:ath:AT1G62020 GeneFarm:2989 TAIR:At1g62020
HOGENOM:HOG000195913 InParanoid:Q94A40 KO:K05236 OMA:PLAADHI
PhylomeDB:Q94A40 ProtClustDB:CLSN2914500 Genevestigator:Q94A40
InterPro:IPR016391 PIRSF:PIRSF003354 Uniprot:Q94A40
Length = 1216
Score = 303 (111.7 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 82/292 (28%), Positives = 125/292 (42%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
KF +R V + FHP + + I+LWDY G H V+ + F
Sbjct: 4 KFETKSNR--VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHN 61
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
S L VS D +K+W+ ++CL T+ GH + V F +++SAS D+TI++W
Sbjct: 62 SQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWN 121
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT--KETKAE----LRG 272
+ CV LTGH +V P L+ S S D T RVW + K+T + +R
Sbjct: 122 WQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRL 181
Query: 273 HDHTVECVAWAPGVAS---ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL--L 327
+ + E + +G+ D+ +KLW + +
Sbjct: 182 TQMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEV 241
Query: 328 FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA-HSHF 378
TL GH N V V FH +VS +DK++RVWD + ++T H F
Sbjct: 242 DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRF 293
Score = 265 (98.3 bits), Expect = 6.7e-20, Sum P(2) = 6.7e-20
Identities = 65/245 (26%), Positives = 114/245 (46%)
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
++LWD + H+ V GV F + +S D IK+W C+ TL GH
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGH 92
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VAS 288
+++R ++ + + S S+D T R+W+ ++ + L GH+H V C ++ P V S
Sbjct: 93 LDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVS 152
Query: 289 ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGS---GSL----LFTLIGHDNWVRGVT 341
S+ + + + D ++L + S G + + L GHD V
Sbjct: 153 ASLDQTVRVWDIGALRKKTVSPA-DDIMRLTQMNSDLFGGVDAIVKYVLEGHDRGVNWAA 211
Query: 342 FHPGGKYLVSCGDDKTLRVWDTANKR--NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
FHP +VS DD+ +++W + + TL H + V+S+ FH +V+ S DK+
Sbjct: 212 FHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKS 271
Query: 400 VKVWE 404
++VW+
Sbjct: 272 IRVWD 276
Score = 143 (55.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 42/133 (31%), Positives = 68/133 (51%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V AF + L+VS + D +KLW M+ + + T++GH +NV+ V F
Sbjct: 200 LEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAK 259
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTG-H-REWVRQIKVSPDGTLLASCSNDHTARVW 259
D ++S S DK+I++W+ ++T H R W+ + V P+ LLA+ +D V+
Sbjct: 260 QDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWI--LAVHPEMNLLAA-GHDSGMIVF 316
Query: 260 SLATKETKAELRG 272
L + L G
Sbjct: 317 KLERERPAFALSG 329
Score = 38 (18.4 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 390 YVVTGSVDKTVKV 402
Y++TG++DK K+
Sbjct: 709 YLITGNLDKLSKL 721
Score = 38 (18.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 306 YLATGSRDKTIKLWDV 321
YL TG+ DK KL +
Sbjct: 709 YLITGNLDKLSKLMKI 724
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 313 (115.2 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 82/287 (28%), Positives = 134/287 (46%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P +A+ +D I +WD G ++ L H ++ IAF K LV+CS D +
Sbjct: 861 VAFSPDSRQIAAGFKDGKIFIWD-AAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDST 919
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+K WD+ T ++ GH +VT + P+ + S S DKTIK+W+ ATG KTLTGH
Sbjct: 920 IKRWDI-TIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGH 978
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD-HTVECVA-----WAPG 285
+ V ++ S D + SCS++ ++W AT + + D T+ V+ A G
Sbjct: 979 LDTVEKVVFSLDNRQIVSCSSE-AVKIWDAATGKVQNSFESDDVFTIVAVSPDGKHIASG 1037
Query: 286 VASESIS--EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFH 343
+ I + A Y + T +++D+ +F + + G+ F
Sbjct: 1038 HCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIF-----NTQITGLVFS 1092
Query: 344 PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
P K ++S D+ +++WD A K L HS + + F R+ Y
Sbjct: 1093 PDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGY 1139
Score = 229 (85.7 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 46/129 (35%), Positives = 77/129 (59%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH V ++ P ++AS S D TI+LWD TG+ ++ L GHLD+V+ + F + +
Sbjct: 935 GHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQI 994
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
VSCS++ ++K+WD +T + + + D T VA P+ + S + IK+W++ATG
Sbjct: 995 VSCSSE-AVKIWDAATGKVQNSFESDDV-FTIVAVSPDGKHIASGHCNGRIKLWDMATGS 1052
Query: 224 CVKTLTGHR 232
+KT+ G+R
Sbjct: 1053 LLKTMAGYR 1061
Score = 225 (84.3 bits), Expect = 4.3e-20, Sum P(2) = 4.3e-20
Identities = 59/184 (32%), Positives = 88/184 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + F + + S D T+RLW+ TG+ E+ GH +V +A G+
Sbjct: 770 LKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGR 829
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG-VAFLPNSDFVLSASRDKTIKMWEVA 220
+VS S + ++KLWD +T LKT+ G VAF P+S + + +D I +W+ A
Sbjct: 830 QIVSGSIE-AVKLWDAATGDLLKTLAS---GFAGSVAFSPDSRQIAAGFKDGKIFIWDAA 885
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
G KTL H + I SPD L +CS D T + W + + E GH V +
Sbjct: 886 -GTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQ-EAVGHSKHVTTM 943
Query: 281 AWAP 284
+P
Sbjct: 944 VLSP 947
Score = 197 (74.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 50/163 (30%), Positives = 80/163 (49%)
Query: 125 SEDAT-IRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCL 183
S D+T I L+D TG+ ++ L GH +AF + LV+ S D +++LW+ +T
Sbjct: 750 SRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLE 809
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
KT GH V VA + ++S S + +K+W+ ATG +KTL + + SPD
Sbjct: 810 KTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLASG--FAGSVAFSPD 866
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGV 286
+A+ D +W A K L H + +A++P V
Sbjct: 867 SRQIAAGFKDGKIFIWDAAGTLQKT-LERHPGAIMSIAFSPDV 908
Score = 196 (74.1 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 66/234 (28%), Positives = 103/234 (44%)
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG-H--------RE 233
++T+ GH V VAF P+ + S S IK+W+ TG KTL+G H +E
Sbjct: 613 IQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISE 293
V+ + PD L+ S D + +W T + + E+ H + V + E
Sbjct: 673 QVKAMAFLPDSKLIISGYYDGSVMLWDTTTGD-RQEIADH-FGISKVNYTYLQPPEQGGY 730
Query: 294 AAXXXXXXXXXXYLAT-G-SRDKT-IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV 350
+A G SRD T I L+D +G L L GH + + F + LV
Sbjct: 731 GLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQLV 790
Query: 351 SCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ D T+R+W+T KT H+ V S+ +V+GS++ VK+W+
Sbjct: 791 TGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWD 843
Score = 149 (57.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 67/264 (25%), Positives = 105/264 (39%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L+GH V KV+F + SCS +A +++WD TG+ + + D +A GK
Sbjct: 975 LTGHLDTVEKVVFSLDNRQIVSCSSEA-VKIWDAATGKVQNSFESD-DVFTIVAVSPDGK 1032
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ S + +KLWDM+T LKTM G+ + D L + T
Sbjct: 1033 HIASGHCNGRIKLWDMATGSLLKTMAGYRSKFDSLVTTEVFDIQLQEAIFNT-------- 1084
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
+TG + SPD L+ S S D ++W AT + + L H ++ A
Sbjct: 1085 -----QITG-------LVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDA 1132
Query: 282 WA-----PG-VASESISEAAXXXXXXXXXXYLATGSRDKTIKLWD-----VGS---GSLL 327
++ P + S + S + S +K++K VGS S
Sbjct: 1133 FSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSIEKSLKASKYLGRAVGSHIKSSRP 1192
Query: 328 FTLIGHDNWVRGVTFHPGGKYLVS 351
+ I V V F PG +YL +
Sbjct: 1193 WKEIKPSAQVYDVIFSPGNQYLAT 1216
Score = 147 (56.8 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 34/98 (34%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D TIK WD+ G + +GH V + P GK + S DKT+++WD A
Sbjct: 911 LVTCSTDSTIKRWDITIGGVQ-EAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWDAATG 969
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KTL H V + F + +V+ S + VK+W+
Sbjct: 970 DLQKTLTGHLDTVEKVVFSLDNRQIVSCS-SEAVKIWD 1006
Score = 129 (50.5 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 32/98 (32%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +GS + +KLWD +G LL TL + V F P + + + D + +WD A
Sbjct: 831 IVSGSIE-AVKLWDAATGDLLKTLAS--GFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGT 887
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KTLE H + S+ F +VT S D T+K W+
Sbjct: 888 LQ-KTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWD 924
Score = 127 (49.8 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 30/90 (33%), Positives = 46/90 (51%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG-H--------DHN 192
+ L GH ++V +AF GK + S S +KLWD +T KT+ G H
Sbjct: 614 QTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQEQ 673
Query: 193 VTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
V +AFLP+S ++S D ++ +W+ TG
Sbjct: 674 VKAMAFLPDSKLIISGYYDGSVMLWDTTTG 703
Score = 118 (46.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 84 RAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERA 143
RA W P L+GH V +V F P +AS S+ I+LWD TG ++
Sbjct: 601 RAPPMEDSWTPMIQ---TLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKT 657
Query: 144 LHG-H--------LDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
L G H + V+ +AF KL++S D S+ LWD +T
Sbjct: 658 LSGSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTT 702
Score = 91 (37.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 24/70 (34%), Positives = 34/70 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTL---------------IGHDNWVRGVTFHPGGKYLVS 351
L+T S D+ IKLWD +G L L G+ NW+ V F G+++ +
Sbjct: 1099 LST-STDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAA 1157
Query: 352 CGDDKTLRVW 361
DKT+RVW
Sbjct: 1158 ASADKTIRVW 1167
Score = 90 (36.7 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
Identities = 22/82 (26%), Positives = 36/82 (43%)
Query: 337 VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY------ 390
+ G+ F P K ++S D+ +++WD A K L HS + + F R+ Y
Sbjct: 1086 ITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSGYPNWIFS 1145
Query: 391 ---------VVTGSVDKTVKVW 403
+ S DKT++VW
Sbjct: 1146 VAFSSDGQHIAAASADKTIRVW 1167
Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGE-YERALHGHLDSV 151
F P L+ S D ++ LWD TG+ E A H + V
Sbjct: 679 FLPDSKLIISGYYDGSVMLWDTTTGDRQEIADHFGISKV 717
Score = 43 (20.2 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVWE 404
+T L F +++ S D+ +K+W+
Sbjct: 1086 ITGLVFSPDAKLILSTSTDRAIKLWD 1111
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 304 (112.1 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 76/246 (30%), Positives = 114/246 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 248 TLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAH 306
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N F S S D I + + + VKT GH V I
Sbjct: 307 TGEAKQQFPFHSAPALDVDWQNNMTFA-SCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAI 365
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ +L+ H + + W+P G A+ + + +
Sbjct: 366 KWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIM- 424
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWDV G TL+ H V V F P GKYL S DK
Sbjct: 425 ---------LASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKY 475
Query: 358 LRVWDT 363
+ +W+T
Sbjct: 476 VHIWNT 481
Score = 225 (84.3 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 66/244 (27%), Positives = 110/244 (45%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
W L H+ P+ + ++ + + S D T +WD TGE ++ H
Sbjct: 262 WTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPA 321
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
D+ + Q+ SCS DM + + + +KT QGH + V + + P+ + S S D
Sbjct: 322 LDVDW-QNNMTFASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 380
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR 271
T+K+W + CV L H + + IK SP G + SN +++ + LA+ + +R
Sbjct: 381 MTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGP---ATSNPNSSIM--LASASFDSTVR 435
Query: 272 GHDHTVECVAWAPGVASESI---SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLF 328
D VE GV + ++ E YLA+GS DK + +W+ SGSL+
Sbjct: 436 LWD--VE-----QGVCTHTLMKHQEPVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVH 488
Query: 329 TLIG 332
+ G
Sbjct: 489 SYQG 492
Score = 225 (84.3 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 87/331 (26%), Positives = 131/331 (39%)
Query: 97 PEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERAL-H----- 145
P K L GH S V ++PV L+AS S D+T R+W+ G + L H
Sbjct: 169 PNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 228
Query: 146 GH-LDSVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
GH + S +D+ ++ G LL S D ++W + T+ H + + +
Sbjct: 229 GHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENG-NLASTLGQHKGPIFALKWNKK 287
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
++VLSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 288 GNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCRL 346
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 347 GCDHPVKTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSM 388
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H + + + P G L S D T+R+WD TL
Sbjct: 389 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTL 448
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 449 MKHQEPVYSVAFSPDGKYLASGSFDKYVHIW 479
Score = 134 (52.2 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 62/276 (22%), Positives = 107/276 (38%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G + +
Sbjct: 175 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN-----ENSNGGSTQLVLRHCIREGG 229
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
+ +++D T W + G TL + ++ + LAS H +++L
Sbjct: 230 HDVPSNKDVTSLDWN-SDG----TLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKW 284
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 285 NKKGNYVLSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIH 342
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AHS
Sbjct: 343 VCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSK 402
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 403 EIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD 438
Score = 126 (49.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 107 SPVIKVIFHPVFSLM-ASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVS 165
SP +P S+M AS S D+T+RLWD E G L H + V +AF GK L S
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPVYSVAFSPDGKYLAS 469
Query: 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
S D + +W+ + + + QG + V + D V +++ D ++
Sbjct: 470 GSFDKYVHIWNTQSGSLVHSYQGTG-GIFEVCWNARGDKVGASASDGSV 517
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 277 (102.6 bits), Expect = 1.4e-22, P = 1.4e-22
Identities = 68/253 (26%), Positives = 114/253 (45%)
Query: 92 W-IPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W +P+ A L H+ V+F PV +A+ S D T +LW + G + GHLD
Sbjct: 282 WEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHLD 340
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+ +AF SGK L + S D + +LWD++T L +GH +V G+AF + S
Sbjct: 341 RLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCG 400
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
D ++W++ TG + GH + V + SP+G LAS D+ R+W L +++
Sbjct: 401 LDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
Query: 270 LRGHDHTVECVAWAP--G--VASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
+ H + V V + P G +A+ S + + + D+ + S
Sbjct: 461 IPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADS 520
Query: 326 LLFTLIGHDNWVR 338
+ HD ++
Sbjct: 521 SCIATVSHDRTIK 533
Score = 259 (96.2 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 62/198 (31%), Positives = 84/198 (42%)
Query: 81 APTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEY 140
A A R+ W GH + +V FHP + + S D T RLWD TG
Sbjct: 314 ATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
GH SV IAF Q G L SC D ++WD+ T + + QGH V V F P
Sbjct: 374 LLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSP 433
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVW 259
N + S D ++W++ + + H V Q+K P +G LA+ S D +W
Sbjct: 434 NGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIW 493
Query: 260 SLATKETKAELRGHDHTV 277
S L GH+ V
Sbjct: 494 SGRDFSLVKSLAGHESKV 511
Score = 230 (86.0 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 61/208 (29%), Positives = 92/208 (44%)
Query: 82 PTRAKRSPTEWIPRAPEKFALS----GHRSPVIKVIFHPVFSLMASCSEDATIRLWDY-E 136
P + T+W + + AL G P+ F ++A+CS +LW+ +
Sbjct: 227 PDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQ 286
Query: 137 TGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV 196
L H + D+ F L + SAD + KLW L+T +GH + V
Sbjct: 287 VTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDG-TLLQTFEGHLDRLARV 345
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
AF P+ ++ + S DKT ++W++ TG + GH V I DG L ASC D A
Sbjct: 346 AFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLA 405
Query: 257 RVWSLATKETKAELRGHDHTVECVAWAP 284
RVW L T + +GH V V ++P
Sbjct: 406 RVWDLRTGRSILVFQGHIKPVFSVNFSP 433
Score = 218 (81.8 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 50/180 (27%), Positives = 83/180 (46%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W I E GH V + F +L ASC D+ R+WD TG GH+
Sbjct: 366 WDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKP 425
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS-AS 209
V + F +G L S D ++WD+ + L + H + V+ V + P + L+ AS
Sbjct: 426 VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATAS 485
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
D + +W VK+L GH V + ++ D + +A+ S+D T ++W+ + + + E
Sbjct: 486 YDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDE 545
Score = 174 (66.3 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL T S DKT +LWD+ +G+ L GH V G+ F G SCG D RVWD
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R++ + H V S++F ++ +G D ++W+ R
Sbjct: 413 GRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
Score = 172 (65.6 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 38/100 (38%), Positives = 51/100 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LAT S D+T KLW G+LL T GH + + V FHP GKYL + DKT R+WD
Sbjct: 313 LATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ E HS V + F + + +D +VW+ R
Sbjct: 372 AELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLR 411
Score = 147 (56.8 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/95 (29%), Positives = 48/95 (50%)
Query: 313 DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
D ++WD+ +G + GH V V F P G +L S G+D R+WD ++++ +
Sbjct: 402 DSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYII 461
Query: 373 EAHSHFVTSLDFHRAHPY-VVTGSVDKTVKVWECR 406
AH++ V+ + + Y + T S D V +W R
Sbjct: 462 PAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
Score = 135 (52.6 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPG-GKYLVSCGDDKTLRVWDTA 364
+LA+G D ++WD+ L+ + H N V V + P G +L + D + +W
Sbjct: 437 HLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGR 496
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ +K+L H V SLD + T S D+T+K+W
Sbjct: 497 DFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
Score = 82 (33.9 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
+LAT S D + +W SL+ +L GH++ V + + + D+T+++W ++
Sbjct: 480 FLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSS 538
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 226 (84.6 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 52/194 (26%), Positives = 97/194 (50%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W + +A + H +PV V + P +L+AS D T+++W+ + H +
Sbjct: 45 WNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKA 104
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ + FD +G L+++ S D S K+W ++ Q + + ++ V F PN V +AS
Sbjct: 105 VRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASD 164
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
DK++++++V +G CV+T T R RQ+ P G +LA + +++ ++ +
Sbjct: 165 DKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLY 224
Query: 271 RGHDHTVECVAWAP 284
H V VA+ P
Sbjct: 225 VVHSAPVNDVAFHP 238
Score = 209 (78.6 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 49/182 (26%), Positives = 81/182 (44%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + ++ F P + +A+ S D+T+ LW+ H V +A+ G L
Sbjct: 15 TGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNL 74
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+ S D ++K+W+ H V V F +L+AS DK+ K+W VA
Sbjct: 75 VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARR 134
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
V + WVR K SP+G L+A+ S+D + R++ + + E +AW
Sbjct: 135 QFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAW 194
Query: 283 AP 284
P
Sbjct: 195 HP 196
Score = 199 (75.1 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 46/146 (31%), Positives = 77/146 (52%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
F P L+A+ S+D ++R++D ++GE R + + +A+ G +L +K
Sbjct: 152 FSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIK 211
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
++D+S Q L+ H V VAF P+ F+LS S D+TI++ ++ G + TLTGH +
Sbjct: 212 IFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTD 271
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVW 259
V + S DG A+ +D VW
Sbjct: 272 AVNAVAFSRDGDKFATGGSDRQLLVW 297
Score = 178 (67.7 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 37/145 (25%), Positives = 70/145 (48%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS-TYQCLKTMQGHDHNVTGVAFL 199
ER GH + + F G + + S D ++ LW+++ +C++ H V GVA+
Sbjct: 11 ERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIR-FASHSAPVNGVAWS 69
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
P + V SA D+T+K+WE H + VR + G L+ + S+D +A++W
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
Query: 260 SLATKETKAELRGHDHTVECVAWAP 284
+A ++ + ++ V ++P
Sbjct: 130 RVARRQFVSSFAQQNNWVRSAKFSP 154
Score = 160 (61.4 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 43/179 (24%), Positives = 80/179 (44%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V F LM + S+D + ++W ++ + + V+ F +GKL+
Sbjct: 101 HSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVA 160
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ S D S++++D+ + +C++T +A+ P + + A IK+++V+
Sbjct: 161 TASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQL 220
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
++ H V + P G L S S+D T R+ L L GH V VA++
Sbjct: 221 LQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFS 279
Score = 157 (60.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D T+ LW++ + H V GV + P G + S G D+T+++W+ +
Sbjct: 33 IATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLR 92
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AHS V S+DF ++T S DK+ K+W
Sbjct: 93 GVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIW 129
Score = 152 (58.6 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
IK++DV LL + H V V FHP G +L+S DD+T+R+ D R + TL H
Sbjct: 210 IKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGH 269
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ V ++ F R TG D+ + VW+
Sbjct: 270 TDAVNAVAFSRDGDKFATGGSDRQLLVWQ 298
Score = 151 (58.2 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 40/139 (28%), Positives = 62/139 (44%)
Query: 254 HTARVWSLA--TKETKAELRGHDHTVECVAWAP---GVASESI--SEAAXXXXXXXXXXY 306
H+A V +A K GHD TV+ W P GV+ E + S+A
Sbjct: 59 HSAPVNGVAWSPKGNLVASAGHDRTVKI--WEPKLRGVSGEFVAHSKAVRSVDFDSTGHL 116
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ T S DK+ K+W V + + +NWVR F P GK + + DDK++R++D +
Sbjct: 117 MLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSG 176
Query: 367 RNMKTLEAHSHFVTSLDFH 385
++T L +H
Sbjct: 177 ECVRTFTEERAAPRQLAWH 195
Score = 134 (52.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ D+T+K+W+ + + H VR V F G +++ DDK+ ++W A +
Sbjct: 75 VASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARR 134
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ + + +++V S F V T S DK+V++++
Sbjct: 135 QFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYD 172
Score = 125 (49.1 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 27/97 (27%), Positives = 57/97 (58%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYL-VSCGDDKTLRVWDTAN 365
+AT S DK+++++DV SG + T R + +HP G L V+ G ++ ++++D +
Sbjct: 159 VATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCNR-IKIFDVSG 217
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ ++ HS V + FH + ++++GS D+T+++
Sbjct: 218 SQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRI 254
Score = 124 (48.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H +PV V FHP + S S+D TIR+ D G L GH D+V +AF + G
Sbjct: 227 HSAPVNDVAFHPSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFA 286
Query: 165 SCSADMSLKLW-------DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ +D L +W D S ++ + +GV+ + S S D +I++
Sbjct: 287 TGGSDRQLLVWQSNLHTYDASQFEAKSALASSSCESSGVSSKQSEGSSTSKSNDLSIRI 345
Score = 115 (45.5 bits), Expect = 0.00077, P = 0.00077
Identities = 27/108 (25%), Positives = 54/108 (50%)
Query: 111 KVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADM 170
++ +HP +++A I+++D + + H V D+AF SG L+S S D
Sbjct: 191 QLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDR 250
Query: 171 SLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
++++ D+ + + T+ GH V VAF + D + D+ + +W+
Sbjct: 251 TIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQ 298
Score = 108 (43.1 bits), Expect = 4.0e-24, Sum P(2) = 4.0e-24
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+L +GS D+TI++ D+ G ++TL GH + V V F G + G D+ L VW +
Sbjct: 242 FLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVWQS-- 299
Query: 366 KRNMKTLEAHSHF 378
N+ T +A S F
Sbjct: 300 --NLHTYDA-SQF 309
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 302 (111.4 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 93/314 (29%), Positives = 145/314 (46%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH VI V F P +AS S D T+R WD T GH V I++ G
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDG 168
Query: 161 KLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLP---NSD--FVLSASRDKTI 214
K L S + + LWD ST Q + + GH +T +++ P N + +V S+S+D ++
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSV 228
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W+ G C + LTGH + V ++ DG LL S S D T +VW L+GH
Sbjct: 229 RVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHG 287
Query: 275 HTVECVAWAPGVASESIS-EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
H V +A + A + + E A + ++D L ++ +L
Sbjct: 288 HWVNTMALSTDYALRTGAFEPAEA----------SVNAQDLRGSLQELKERAL-----SR 332
Query: 334 DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
N VRG G + LVS DD TL +W A +K+ + + H + + F +
Sbjct: 333 YNLVRG----RGLERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIA 388
Query: 393 TGSVDKTVKVWECR 406
+ S DK++K+W+ R
Sbjct: 389 SASFDKSIKLWDGR 402
Score = 283 (104.7 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 85/315 (26%), Positives = 142/315 (45%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFDQ 158
F GHR V+ + + P +AS ++ I LWD TG + RAL GH + ++++
Sbjct: 150 FTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEP 209
Query: 159 -----SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRDK 212
+ + S S D S+++WD + +C + + GH +VT + + D +L SAS+D+
Sbjct: 210 LHANPECRYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRW--GGDGLLYSASQDR 267
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
TIK+W G +TL GH WV + +S D L A V + + + EL+
Sbjct: 268 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLRGSLQELK- 326
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLI 331
+ + G E L +GS D T+ LW L +
Sbjct: 327 -ERALSRYNLVRGRGLER----------------LVSGSDDFTLFLWSPAEDKKPLARMT 369
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
GH + V F P + + S DK++++WD + + +L H V + + +
Sbjct: 370 GHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLL 429
Query: 392 VTGSVDKTVKVWECR 406
V+GS D T+KVW+ +
Sbjct: 430 VSGSSDSTLKVWDVK 444
Score = 258 (95.9 bits), Expect = 4.6e-20, P = 4.6e-20
Identities = 62/204 (30%), Positives = 99/204 (48%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C +++GH V VAF P ++ S S D T++ W+++T T GHR WV I
Sbjct: 105 RCTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISW 164
Query: 241 SPDGTLLAS-CSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
SPDG LAS C N +W +T K+ L GH + ++W P A+
Sbjct: 165 SPDGKKLASGCKNGQIL-LWDPSTGKQVGRALAGHSKWITALSWEPLHANPECR------ 217
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y+A+ S+D ++++WD +G L GH V + + G L S D+T+
Sbjct: 218 -------YVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTI 269
Query: 359 RVWDTANKRNMKTLEAHSHFVTSL 382
+VW + +TL+ H H+V ++
Sbjct: 270 KVWRAHDGVLCRTLQGHGHWVNTM 293
Score = 226 (84.6 bits), Expect = 3.4e-16, P = 3.4e-16
Identities = 46/128 (35%), Positives = 76/128 (59%)
Query: 92 WIPRAPEK-FA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P +K A ++GH++ + +V+F P ++AS S D +I+LWD TG+Y +L GH+
Sbjct: 356 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA+ +LLVS S+D +LK+WD+ + + GH V V + P+ V S
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGG 475
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 476 KDKCLRIW 483
Score = 210 (79.0 bits), Expect = 2.4e-14, P = 2.4e-14
Identities = 60/171 (35%), Positives = 86/171 (50%)
Query: 125 SEDATIRLWDYETGEYE---RALHGHLDSVQDIAFDQ----SGK---LLVSCSADMSLKL 174
S D +R +E E + L G L +++ A + G+ LVS S D +L L
Sbjct: 296 STDYALRTGAFEPAEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFL 355
Query: 175 WDMST-YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + + L M GH + V F P+S + SAS DK+IK+W+ TG + +L GH
Sbjct: 356 WSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA 415
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
V QI S D LL S S+D T +VW + ++ A+L GH V V W+P
Sbjct: 416 AVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSP 466
Score = 203 (76.5 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 45/140 (32%), Positives = 72/140 (51%)
Query: 121 MASCSEDATIRLWDYETGEYERA-LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D T+ LW + A + GH + + F +++ S S D S+KLWD T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L +++GH V +A+ +S ++S S D T+K+W+V L GH + V +
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVD 463
Query: 240 VSPDGTLLASCSNDHTARVW 259
SPDG +AS D R+W
Sbjct: 464 WSPDGQRVASGGKDKCLRIW 483
Score = 149 (57.5 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+IKLWD +G L +L GH V + + + LVS D TL+VWD +
Sbjct: 387 IASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H+ V ++D+ V +G DK +++W
Sbjct: 447 KLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 37 (18.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 262 ATKETKAELRGHDHTVECVAWAP 284
A + L GH V VA++P
Sbjct: 102 AVTRCTSSLEGHSEAVISVAFSP 124
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 303 (111.7 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 75/264 (28%), Positives = 132/264 (50%)
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
++ + F GKLL + + D +++WD+ST + +K ++GH+ ++ + F P+ D ++S S
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D+++++W++ T C TL+ + V + VSPDG L+A+ S D T RVW T L
Sbjct: 318 DRSVRIWDLRTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 271 -RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS---- 325
G+++ G E ++ +A+GS D+T+KLW + S
Sbjct: 377 DSGNEN---------GNGHE---DSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS 424
Query: 326 -LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV----T 380
T IGH ++V V P +Y++S D+ + WD A+ + L+ H + V
Sbjct: 425 TCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAV 484
Query: 381 SLDFHRAHPYVVTGSVDKTVKVWE 404
SL+ TGS D ++W+
Sbjct: 485 SLNSKGTEGIFATGSGDCKARIWK 508
Score = 291 (107.5 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 84/267 (31%), Positives = 122/267 (45%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P L+A+ +ED IR+WD T + L GH + + F G LVS S D S
Sbjct: 261 VCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRS 320
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL--- 228
+++WD+ T QC T+ D VT VA P+ + + S D+T+++W+ TG+ V+ L
Sbjct: 321 VRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSG 379
Query: 229 ----TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
GH + V + S +G +AS S D T ++W L K K T E V +
Sbjct: 380 NENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS------TCE-VTYI- 431
Query: 285 GVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
G +S Y+ +GS+D+ + WD SG+ L L GH N V V
Sbjct: 432 GHKDFVLSVCCTPDNE-----YILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSL 486
Query: 345 GGK-----YLVSCGDDKTLRVWDTANK 366
K + GD K R+W K
Sbjct: 487 NSKGTEGIFATGSGDCKA-RIWKWTKK 512
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 55/192 (28%), Positives = 91/192 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + + F P + S S D ++R+WD T + L D V +A GK
Sbjct: 293 LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGK 351
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQ-------GHDHNVTGVAFLPNSDFVLSASRDKTI 214
L+ + S D ++++WD +T ++ + GH+ +V VAF N + + S S D+T+
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 411
Query: 215 KMWEVA-----TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
K+W + C T GH+++V + +PD + S S D W A+
Sbjct: 412 KLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLM 471
Query: 270 LRGHDHTVECVA 281
L+GH ++V VA
Sbjct: 472 LQGHRNSVISVA 483
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 66/245 (26%), Positives = 110/245 (44%)
Query: 167 SADMSLKLWDMSTYQCL--KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ ++ KL D S+ + T D + V F P+ + + + DK I++W+++T
Sbjct: 230 TGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRI 289
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+K L GH + + + PDG L S S D + R+W L T + L D V VA +P
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP 348
Query: 285 GVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
+ I AA TG ++ D G+ + GH++ V V F
Sbjct: 349 D--GKLI--AAGSLDRTVRVWDSTTGF---LVERLDSGNENGN----GHEDSVYSVAFSN 397
Query: 345 GGKYLVSCGDDKTLRVWDTANKRNMK-TLEA----HSHFVTSLDFHRAHPYVVTGSVDKT 399
G+ + S D+T+++W K + K T E H FV S+ + Y+++GS D+
Sbjct: 398 NGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRG 457
Query: 400 VKVWE 404
V W+
Sbjct: 458 VIFWD 462
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/115 (34%), Positives = 65/115 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGH-------DN-------WVRGVTFHPGGKYLVS 351
++ATG +KT ++++V +G L+ LI DN ++R V F P GK L +
Sbjct: 214 FIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLAT 272
Query: 352 CGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+DK +R+WD + KR +K L H + SLDF +V+GS D++V++W+ R
Sbjct: 273 GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLR 327
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 303 (111.7 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 75/264 (28%), Positives = 132/264 (50%)
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
++ + F GKLL + + D +++WD+ST + +K ++GH+ ++ + F P+ D ++S S
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D+++++W++ T C TL+ + V + VSPDG L+A+ S D T RVW T L
Sbjct: 318 DRSVRIWDLRTSQCSLTLS-IEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERL 376
Query: 271 -RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS---- 325
G+++ G E ++ +A+GS D+T+KLW + S
Sbjct: 377 DSGNEN---------GNGHE---DSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS 424
Query: 326 -LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV----T 380
T IGH ++V V P +Y++S D+ + WD A+ + L+ H + V
Sbjct: 425 TCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAV 484
Query: 381 SLDFHRAHPYVVTGSVDKTVKVWE 404
SL+ TGS D ++W+
Sbjct: 485 SLNSKGTEGIFATGSGDCKARIWK 508
Score = 291 (107.5 bits), Expect = 3.8e-25, P = 3.8e-25
Identities = 84/267 (31%), Positives = 122/267 (45%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P L+A+ +ED IR+WD T + L GH + + F G LVS S D S
Sbjct: 261 VCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRS 320
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL--- 228
+++WD+ T QC T+ D VT VA P+ + + S D+T+++W+ TG+ V+ L
Sbjct: 321 VRIWDLRTSQCSLTLSIED-GVTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSG 379
Query: 229 ----TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
GH + V + S +G +AS S D T ++W L K K T E V +
Sbjct: 380 NENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKS------TCE-VTYI- 431
Query: 285 GVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
G +S Y+ +GS+D+ + WD SG+ L L GH N V V
Sbjct: 432 GHKDFVLSVCCTPDNE-----YILSGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSL 486
Query: 345 GGK-----YLVSCGDDKTLRVWDTANK 366
K + GD K R+W K
Sbjct: 487 NSKGTEGIFATGSGDCKA-RIWKWTKK 512
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 55/192 (28%), Positives = 91/192 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + + F P + S S D ++R+WD T + L D V +A GK
Sbjct: 293 LRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIE-DGVTTVAVSPDGK 351
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQ-------GHDHNVTGVAFLPNSDFVLSASRDKTI 214
L+ + S D ++++WD +T ++ + GH+ +V VAF N + + S S D+T+
Sbjct: 352 LIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTV 411
Query: 215 KMWEVA-----TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
K+W + C T GH+++V + +PD + S S D W A+
Sbjct: 412 KLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLM 471
Query: 270 LRGHDHTVECVA 281
L+GH ++V VA
Sbjct: 472 LQGHRNSVISVA 483
Score = 195 (73.7 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 66/245 (26%), Positives = 110/245 (44%)
Query: 167 SADMSLKLWDMSTYQCL--KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ ++ KL D S+ + T D + V F P+ + + + DK I++W+++T
Sbjct: 230 TGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLSTKRI 289
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+K L GH + + + PDG L S S D + R+W L T + L D V VA +P
Sbjct: 290 IKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDG-VTTVAVSP 348
Query: 285 GVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
+ I AA TG ++ D G+ + GH++ V V F
Sbjct: 349 D--GKLI--AAGSLDRTVRVWDSTTGF---LVERLDSGNENGN----GHEDSVYSVAFSN 397
Query: 345 GGKYLVSCGDDKTLRVWDTANKRNMK-TLEA----HSHFVTSLDFHRAHPYVVTGSVDKT 399
G+ + S D+T+++W K + K T E H FV S+ + Y+++GS D+
Sbjct: 398 NGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRG 457
Query: 400 VKVWE 404
V W+
Sbjct: 458 VIFWD 462
Score = 167 (63.8 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/115 (34%), Positives = 65/115 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGH-------DN-------WVRGVTFHPGGKYLVS 351
++ATG +KT ++++V +G L+ LI DN ++R V F P GK L +
Sbjct: 214 FIATGC-NKTTQVFNVTTGELVAKLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLAT 272
Query: 352 CGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+DK +R+WD + KR +K L H + SLDF +V+GS D++V++W+ R
Sbjct: 273 GAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLR 327
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 283 (104.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 66/196 (33%), Positives = 95/196 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH PV F S + SCSED +IR WD + GH V D+
Sbjct: 338 LRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSL 397
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
S S D + +LW L+ GH +V V F PNS+++ + S DKT+++W
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G V+ TGHR V + SP+G LAS D ++W LA+ ELRGH ++ +A
Sbjct: 458 GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLA 517
Query: 282 WAPG---VASESISEA 294
++P +AS S+ +
Sbjct: 518 FSPDSGLIASASMDNS 533
Score = 260 (96.6 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
Identities = 56/159 (35%), Positives = 83/159 (52%)
Query: 104 GHRSPVIKVIFHPVFSL-MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
GH PV V P FSL AS S D T RLW ++ R GHL V + F +
Sbjct: 382 GHAYPVWDVDISP-FSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + S D +++LW ++ GH V ++F PN ++ SA D+ +K+W++A+G
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASG 500
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
K L GH + + + SPD L+AS S D++ RVW +
Sbjct: 501 TLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539
Score = 238 (88.8 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 44/122 (36%), Positives = 71/122 (58%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V V FHP + +A+ S D T+RLW + G R GH V ++F +GK
Sbjct: 423 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKY 482
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L S D LKLWD+++ K ++GH ++T +AF P+S + SAS D ++++W++ +
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRST 542
Query: 223 YC 224
C
Sbjct: 543 CC 544
Score = 218 (81.8 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 41/101 (40%), Positives = 60/101 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLATGS DKT++LW G+ + GH V ++F P GKYL S G+D+ L++WD A+
Sbjct: 440 YLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLAS 499
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K L H+ +TSL F + + S+D +V+VW+ R
Sbjct: 500 GTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIR 540
Score = 202 (76.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 49/150 (32%), Positives = 72/150 (48%)
Query: 137 TGEYERALHGHLDSVQDIAF--DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVT 194
TG + L GH V F D SG L+SCS DMS++ WD+ ++ QGH + V
Sbjct: 331 TGTEMKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVW 388
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254
V P S + S S D+T ++W Y ++ GH V +K P+ LA+ S D
Sbjct: 389 DVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDK 448
Query: 255 TARVWSLATKETKAELRGHDHTVECVAWAP 284
T R+WS + GH V ++++P
Sbjct: 449 TVRLWSAQQGNSVRLFTGHRGPVLSLSFSP 478
Score = 175 (66.7 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GHR PV+ + F P +AS ED ++LWD +G + L GH DS+ +AF L
Sbjct: 465 TGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGL 524
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV 196
+ S S D S+++WD+ + C G + GV
Sbjct: 525 IASASMDNSVRVWDIRSTCCNTPADGSSGELVGV 558
Score = 150 (57.9 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y A+GS D+T +LW L GH V V FHP YL + DKT+R+W
Sbjct: 398 YFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQ 457
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++ H V SL F Y+ + D+ +K+W+
Sbjct: 458 GNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWD 496
Score = 147 (56.8 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 51/202 (25%), Positives = 80/202 (39%)
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
T C + + ++S D LLA+ ++ ++WSL +K+ K+E H +
Sbjct: 257 TTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSKKLKSE--PHHVDTSRI 314
Query: 281 AWAPGVASESISEAAXXXXXXX----------XXXYLA--TG----SRDKTIKLWDVGSG 324
A E +E +LA +G S D +I+ WD+GS
Sbjct: 315 RLACDTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSF 374
Query: 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384
+ GH V V P Y S D+T R+W ++ H V + F
Sbjct: 375 TNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKF 434
Query: 385 HRAHPYVVTGSVDKTVKVWECR 406
H Y+ TGS DKTV++W +
Sbjct: 435 HPNSNYLATGSTDKTVRLWSAQ 456
Score = 45 (20.9 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 307 LATGSRDKTIKLWDVGS 323
+A+ S D ++++WD+ S
Sbjct: 525 IASASMDNSVRVWDIRS 541
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 302 (111.4 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 96/314 (30%), Positives = 140/314 (44%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH VI V F P +AS S D T+R WD T + GH V IA+ G
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDG 181
Query: 161 KLLVSCSADMSLKLWDMST-YQCLKTMQGHDHNVTGVAFLP---NSD--FVLSASRDKTI 214
K L S + + LWD +T Q + + GH +T + + P N + ++ SAS+D +I
Sbjct: 182 KKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSI 241
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W+ G C K LTGH + V +K DG LL S S D T +VW L+GH
Sbjct: 242 RIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHA 300
Query: 275 HTVECVAWAPG-VASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
H V +A + V E A +DK + +D
Sbjct: 301 HWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDK------------ 348
Query: 334 DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-NKRNMKTLEAHSHFVTSLDFHRAHPYVV 392
VRG G + LVS DD TL +W A +K+ ++ + H + + F +
Sbjct: 349 ---VRG----QGPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIA 401
Query: 393 TGSVDKTVKVWECR 406
+ S DK++K+WE R
Sbjct: 402 SASFDKSIKLWEGR 415
Score = 277 (102.6 bits), Expect = 9.6e-23, P = 9.6e-23
Identities = 86/314 (27%), Positives = 139/314 (44%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSV-----Q 152
+F GHR V+ + + P +AS +++ I LWD TG + R L GH + +
Sbjct: 162 QFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWE 221
Query: 153 DIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL-SASRD 211
+ + + L S S D S+++WD +C K + GH +VT V + D +L S+S+D
Sbjct: 222 PLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKW--GGDGLLYSSSQD 279
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR 271
+TIK+W G +TL GH WV + +S D L A + + AEL+
Sbjct: 280 RTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFEPAEATINPQDMSGSLAELK 339
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTL 330
D + G E L +GS D T+ LW L +
Sbjct: 340 --DKAQQRYDKVRGQGPER----------------LVSGSDDFTLFLWRPAEDKKPLERM 381
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
GH + V F P + + S DK++++W+ + + +L H V + +
Sbjct: 382 TGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRL 441
Query: 391 VVTGSVDKTVKVWE 404
+V+GS D T+KVW+
Sbjct: 442 LVSGSSDSTLKVWD 455
Score = 263 (97.6 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 70/220 (31%), Positives = 107/220 (48%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+C +++GH V VAF P ++ S S D T++ W+++T T GHR WV I
Sbjct: 118 RCTSSLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAW 177
Query: 241 SPDGTLLAS-CSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
SPDG LAS C N +W AT + L GH + C+ W P I+
Sbjct: 178 SPDGKKLASGCKNSQIF-LWDPATGNQIGRVLTGHSKWITCLCWEP----LHINPECR-- 230
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
YLA+ S+D +I++WD G L GH V V + G L S D+T+
Sbjct: 231 -------YLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTI 282
Query: 359 RVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVD 397
+VW + + +TL+ H+H+V ++ + YV+ TG+ +
Sbjct: 283 KVWRSQDGILCRTLQGHAHWVNTMAL--STDYVLRTGAFE 320
Score = 218 (81.8 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 44/128 (34%), Positives = 74/128 (57%)
Query: 92 WIPRAPEK--FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P +K ++GH++ + +V+F P ++AS S D +I+LW+ TG+Y +L GH+
Sbjct: 369 WRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS 428
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA+ +LLVS S+D +LK+WD T + + GH V + P+ V S
Sbjct: 429 AVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGG 488
Query: 210 RDKTIKMW 217
+DK +++W
Sbjct: 489 KDKCLRIW 496
Score = 212 (79.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 61/171 (35%), Positives = 85/171 (49%)
Query: 125 SEDATIRLWDYETGEYE---RALHGHLDSVQDIA---FD----QSGKLLVSCSADMSLKL 174
S D +R +E E + + G L ++D A +D Q + LVS S D +L L
Sbjct: 309 STDYVLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFL 368
Query: 175 W-DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
W + L+ M GH + V F P++ + SAS DK+IK+WE TG + +L GH
Sbjct: 369 WRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS 428
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
V QI S D LL S S+D T +VW TK+ +L GH V W+P
Sbjct: 429 AVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSP 479
Score = 191 (72.3 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 44/140 (31%), Positives = 71/140 (50%)
Query: 121 MASCSEDATIRLW-DYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D T+ LW E + + GH + + F +++ S S D S+KLW+ T
Sbjct: 357 LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRT 416
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L +++GH V +A+ +S ++S S D T+K+W+ T L GH + V
Sbjct: 417 GKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATD 476
Query: 240 VSPDGTLLASCSNDHTARVW 259
SPDG +AS D R+W
Sbjct: 477 WSPDGQRVASGGKDKCLRIW 496
Score = 150 (57.9 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 33/97 (34%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+A+ S DK+IKLW+ +G L +L GH + V + + + LVS D TL+VWD K
Sbjct: 400 IASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAETK 459
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H+ V + D+ V +G DK +++W
Sbjct: 460 KLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 14 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 73
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 74 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 133
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 134 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 192
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 193 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 234
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 235 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 293
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 294 WSADGQTLFAGYTDNLVRVWQ 314
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 13 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 72
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 73 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 120
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 121 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 173
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 174 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 223
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 58 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 116
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 117 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 175
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 176 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 235
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 236 GD-IINALCFSP 246
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 106 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 165
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 166 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 224
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 225 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 282
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 283 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 319
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 94/321 (29%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 77/231 (33%), Positives = 113/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH+ VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++ S++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS----SDN-------- 117
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 118 ------RQIVSGSRDKTIKLWNT-LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 246 (91.7 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 64/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 147 (56.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 55/226 (24%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 260 (96.6 bits), Expect = 2.9e-20, P = 2.9e-20
Identities = 65/222 (29%), Positives = 110/222 (49%)
Query: 181 QCLKTMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+C +M GHD + F P+ S +++ S D T ++W+ T + T+ GH WV +
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAE-LRGHDHTVECVAWAP-GVASESISEAAXX 297
+PD +++A+ S D+T R W + LR H + + W P +A +S
Sbjct: 185 WAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDS------- 237
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+GS+D T+++W+V +LLFTL GH + V + G ++ S DKT
Sbjct: 238 -----GPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKT 291
Query: 358 LRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+R+WD + + + L+ H+ V L H + +G+ D T
Sbjct: 292 IRIWDAKDGKCLHILKGHAARVNHLSLSTEH-VLRSGAYDHT 332
Score = 224 (83.9 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 52/129 (40%), Positives = 71/129 (55%)
Query: 158 QSGKLLVSCSADMSLKLWD--MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
QSG+ LVS S D+ L LWD ST K M GH V +F P+ + +AS D +++
Sbjct: 356 QSGERLVSASDDLQLILWDPQKSTKPITK-MHGHQKVVNHASFSPDGRCIATASFDSSVR 414
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+ TG + TL GH V Q S D LL S S D T +VW + +K+ K +L GH+
Sbjct: 415 LWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHED 474
Query: 276 TVECVAWAP 284
V V W+P
Sbjct: 475 QVFAVDWSP 483
Score = 215 (80.7 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 47/141 (33%), Positives = 75/141 (53%)
Query: 121 MASCSEDATIRLWDYETGEYE-RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ S S+D + LWD + +HGH V +F G+ + + S D S++LWD T
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKT 420
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L T++GH V A+ +S ++S+S+D T+K+W+V + L GH + V +
Sbjct: 421 GKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVD 480
Query: 240 VSPDGTLLASCSNDHTARVWS 260
SPDG +AS D R+WS
Sbjct: 481 WSPDGQRVASGGADKAVRIWS 501
Score = 209 (78.6 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 58/201 (28%), Positives = 94/201 (46%)
Query: 143 ALHGHLDSVQDIAFDQS-GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
+++GH ++ F S LV+ S D + +LWD T + TM+GH + V+ VA+ P+
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPD 188
Query: 202 SDFVLSASRDKTIKMWEVATGYCV-KTLTGHRE------WVRQIKVSPDGT--LLASCSN 252
+ + + S D TI+ W+ G + L H + W + + ++PD LLAS S
Sbjct: 189 ASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCW-QPLHLAPDSGPYLLASGSK 247
Query: 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSR 312
D+T R+W++ + L GH + CV W ++ + S
Sbjct: 248 DNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-------------------GQNWIYSSSY 288
Query: 313 DKTIKLWDVGSGSLLFTLIGH 333
DKTI++WD G L L GH
Sbjct: 289 DKTIRIWDAKDGKCLHILKGH 309
Score = 205 (77.2 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 56/192 (29%), Positives = 93/192 (48%)
Query: 224 CVKTLTGHREWVRQIKVSPD-GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C ++ GH + + SP + L + S D TAR+W T+ A ++GH + V CVAW
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW 185
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLF-TLIGHDNWVRGVT 341
AP SI +ATGS D TI+ WD GS + L H + +
Sbjct: 186 APDA---SI---------------IATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALC 227
Query: 342 FHP------GGKYLVSCGD-DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
+ P G YL++ G D T+R+W+ + + TL H+ +T + + + ++ +
Sbjct: 228 WQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQN-WIYSS 286
Query: 395 SVDKTVKVWECR 406
S DKT+++W+ +
Sbjct: 287 SYDKTIRIWDAK 298
Score = 201 (75.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 42/128 (32%), Positives = 69/128 (53%)
Query: 92 WIPRAPEK--FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
W P+ K + GH+ V F P +A+ S D+++RLWD +TG++ L GH+
Sbjct: 373 WDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVA 432
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V A+ +LLVS S D +LK+WD+ + + + GH+ V V + P+ V S
Sbjct: 433 AVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGG 492
Query: 210 RDKTIKMW 217
DK +++W
Sbjct: 493 ADKAVRIW 500
Score = 186 (70.5 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 55/179 (30%), Positives = 91/179 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE-YERALHGHLDSVQDIAFD--- 157
+ GH + V V + P S++A+ S D TIR WD + G AL H + + +
Sbjct: 173 MKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLH 232
Query: 158 ---QSGK-LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
SG LL S S D ++++W++ L T+ GH +T V + +++ S+S DKT
Sbjct: 233 LAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW-GGQNWIYSSSYDKT 291
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA-RVWSLATKETKAELR 271
I++W+ G C+ L GH V + +S + +L S + DHT + S + + KA+ R
Sbjct: 292 IRIWDAKDGKCLHILKGHAARVNHLSLSTEH-VLRSGAYDHTDFKPKSFSDERRKAKER 349
Score = 162 (62.1 bits), Expect = 7.1e-21, Sum P(2) = 7.1e-21
Identities = 44/182 (24%), Positives = 84/182 (46%)
Query: 101 ALSGHRSPVIKVIFHP-VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+++GH +I F P S + + S D T RLWD +T + GH + V +A+
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPD 188
Query: 160 GKLLVSCSADMSLKLWDMSTYQCL-KTMQGHDHNVTGVAFLP------NSDFVL-SASRD 211
++ + S D +++ WD + ++ H + + + P + ++L S S+D
Sbjct: 189 ASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKD 248
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR 271
T+++W V + TL+GH + ++ + +S S D T R+W + L+
Sbjct: 249 NTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSS-SYDKTIRIWDAKDGKCLHILK 307
Query: 272 GH 273
GH
Sbjct: 308 GH 309
Score = 157 (60.3 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+AT S D +++LWD +G L TL GH V + + LVS D TL+VWD +K
Sbjct: 404 IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ L H V ++D+ V +G DK V++W
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 156 (60.0 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 53/186 (28%), Positives = 83/186 (44%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F LSGH +P+ V + + + S S D TIR+WD + G+ L GH V ++
Sbjct: 263 FTLSGHTAPITCVRWGGQ-NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTE 321
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS-DFVLSASRDKTIKMWE 218
L K S + K + ++ A L S + ++SAS D + +W+
Sbjct: 322 HVLRSGAYDHTDFKPKSFSDER-RKAKERYE------ACLKQSGERLVSASDDLQLILWD 374
Query: 219 VATGYC-VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+ + GH++ V SPDG +A+ S D + R+W T + A LRGH V
Sbjct: 375 PQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAV 434
Query: 278 ECVAWA 283
AW+
Sbjct: 435 YQCAWS 440
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 51/196 (26%), Positives = 82/196 (41%)
Query: 224 CVKTLTGHREWV------RQIKV--SPDGTLLASCSNDHTARVWSLATKETKAELRG--H 273
CV+ G + W+ + I++ + DG L H ARV L+ T+ LR +
Sbjct: 274 CVRW--GGQNWIYSSSYDKTIRIWDAKDGKCLHILKG-HAARVNHLSLS-TEHVLRSGAY 329
Query: 274 DHTVECVAWAPGVASESISEAAXXXXX--XXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
DHT + P S+ +A L + S D + LWD + T +
Sbjct: 330 DHT----DFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKM 385
Query: 332 -GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
GH V +F P G+ + + D ++R+WD + + TL H V +
Sbjct: 386 HGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRL 445
Query: 391 VVTGSVDKTVKVWECR 406
+V+ S D T+KVW+ R
Sbjct: 446 LVSSSQDTTLKVWDVR 461
Score = 44 (20.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESIS 292
A A + GHD T+ ++P +S ++
Sbjct: 122 AVTRCTASMNGHDGTIISAQFSPSTSSRLVT 152
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 303 (111.7 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 76/246 (30%), Positives = 114/246 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 251 TLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAH 309
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + + VKT GH V I
Sbjct: 310 TGEAKQQFPFHSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 368
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ +L+ H + + W+P G A+ + +
Sbjct: 369 KWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS---- 424
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWDV G + TL H V V F P GKYL S DK
Sbjct: 425 ------NIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 478
Query: 358 LRVWDT 363
+ +W+T
Sbjct: 479 VHIWNT 484
Score = 269 (99.8 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 67/187 (35%), Positives = 92/187 (49%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H +P + V + + ASCS D I + + GH + V I +D SG LL
Sbjct: 320 HSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 378
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNV-------TGVAFL-PNSDFVL-SASRDKTIK 215
SCS DM+LK+W M C+ +Q H + TG A PNS+ +L SAS D T++
Sbjct: 379 SCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 438
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G C+ TLT H+E V + SPDG LAS S D +W+ + RG
Sbjct: 439 LWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG 498
Query: 276 TVECVAW 282
E V W
Sbjct: 499 IFE-VCW 504
Score = 233 (87.1 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 86/331 (25%), Positives = 132/331 (39%)
Query: 97 PEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERAL-H----- 145
P K L GH S V ++PV L+AS S D+T R+W+ G + L H
Sbjct: 172 PSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 231
Query: 146 GH-LDSVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
GH + S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 232 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKK 290
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+++LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 291 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRL 349
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 350 GCDRPVKTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSM 391
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H + + + P G L S D T+R+WD + TL
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 452 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 61/231 (26%), Positives = 105/231 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + Q+
Sbjct: 275 LGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNT 333
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P+ + S S D T+K+W +
Sbjct: 334 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 393
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
CV L H + + IK SP G + SN ++ + + A+ ++ L + V C+
Sbjct: 394 DACVHDLQAHSKEIYTIKWSPTGP---ATSNPNSNIMLASASFDSTVRLWDVERGV-CIH 449
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
E YLA+GS DK + +W+ SGSL+ + G
Sbjct: 450 -----TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 65/276 (23%), Positives = 109/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G + +
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN-----ENSNGGSTQLVLRHCIREGG 232
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
+ +++D T W + G + T G + +I DG L AS H +++L
Sbjct: 233 HDVPSNKDVTSLDWN-SDGTLLAT--GSYDGFARIWTE-DGNL-ASTLGQHKGPIFALKW 287
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 288 NKKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 345
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AHS
Sbjct: 346 VCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSK 405
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD 441
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 303 (111.7 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 76/246 (30%), Positives = 114/246 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 251 TLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAH 309
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + + VKT GH V I
Sbjct: 310 TGEAKQQFPFHSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 368
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ +L+ H + + W+P G A+ + +
Sbjct: 369 KWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS---- 424
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWDV G + TL H V V F P GKYL S DK
Sbjct: 425 ------NIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 478
Query: 358 LRVWDT 363
+ +W+T
Sbjct: 479 VHIWNT 484
Score = 269 (99.8 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 67/187 (35%), Positives = 92/187 (49%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H +P + V + + ASCS D I + + GH + V I +D SG LL
Sbjct: 320 HSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 378
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNV-------TGVAFL-PNSDFVL-SASRDKTIK 215
SCS DM+LK+W M C+ +Q H + TG A PNS+ +L SAS D T++
Sbjct: 379 SCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 438
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G C+ TLT H+E V + SPDG LAS S D +W+ + RG
Sbjct: 439 LWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGG 498
Query: 276 TVECVAW 282
E V W
Sbjct: 499 IFE-VCW 504
Score = 233 (87.1 bits), Expect = 6.5e-17, P = 6.5e-17
Identities = 86/331 (25%), Positives = 132/331 (39%)
Query: 97 PEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERAL-H----- 145
P K L GH S V ++PV L+AS S D+T R+W+ G + L H
Sbjct: 172 PSKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 231
Query: 146 GH-LDSVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
GH + S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 232 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKK 290
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+++LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 291 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRL 349
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 350 GCDRPVKTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSM 391
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H + + + P G L S D T+R+WD + TL
Sbjct: 392 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTL 451
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 452 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 482
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 61/231 (26%), Positives = 105/231 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + Q+
Sbjct: 275 LGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNT 333
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P+ + S S D T+K+W +
Sbjct: 334 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 393
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
CV L H + + IK SP G + SN ++ + + A+ ++ L + V C+
Sbjct: 394 DACVHDLQAHSKEIYTIKWSPTGP---ATSNPNSNIMLASASFDSTVRLWDVERGV-CIH 449
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
E YLA+GS DK + +W+ SGSL+ + G
Sbjct: 450 -----TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG 495
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 65/276 (23%), Positives = 109/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G + +
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN-----ENSNGGSTQLVLRHCIREGG 232
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
+ +++D T W + G + T G + +I DG L AS H +++L
Sbjct: 233 HDVPSNKDVTSLDWN-SDGTLLAT--GSYDGFARIWTE-DGNL-ASTLGQHKGPIFALKW 287
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 288 NKKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 345
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AHS
Sbjct: 346 VCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSK 405
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 406 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD 441
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 283 (104.7 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 67/200 (33%), Positives = 94/200 (47%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E L GH PV F S + SCSED +IR WD + GH V D+
Sbjct: 330 EMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDIS 389
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
S S D + +LW L+ GH +V V F PNS+++ + S DKT+++W
Sbjct: 390 PHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLW 449
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
G V+ TGHR V + SP+G LAS D ++W LA+ ELRGH +
Sbjct: 450 STQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 509
Query: 278 ECVAWAPG---VASESISEA 294
+ ++P VAS S+ +
Sbjct: 510 TSLTFSPDSSLVASASMDNS 529
Score = 261 (96.9 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 54/169 (31%), Positives = 83/169 (49%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV + P AS S D T RLW ++ R GHL V + F + L
Sbjct: 378 GHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYL 437
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S D +++LW ++ GH V +AF PN ++ SA D+ +K+W++A+G
Sbjct: 438 ATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGT 497
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
K L GH + + + SPD +L+AS S D++ RVW + + G
Sbjct: 498 LYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADG 546
Score = 249 (92.7 bits), Expect = 1.0e-18, P = 1.0e-18
Identities = 46/122 (37%), Positives = 71/122 (58%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V V FHP + +A+ S D T+RLW + G R GH V +AF +GK
Sbjct: 419 AGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKY 478
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L S D LKLWD+++ K ++GH N+T + F P+S V SAS D ++++W++ +
Sbjct: 479 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSS 538
Query: 223 YC 224
+C
Sbjct: 539 HC 540
Score = 218 (81.8 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 42/101 (41%), Positives = 59/101 (58%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLATGS DKT++LW G+ + GH V + F P GKYL S G+D+ L++WD A+
Sbjct: 436 YLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLAS 495
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K L H+ +TSL F V + S+D +V+VW+ R
Sbjct: 496 GTLYKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIR 536
Score = 208 (78.3 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 50/153 (32%), Positives = 74/153 (48%)
Query: 134 DYETGEYERALHGHLDSVQDIAF--DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
D G + L GH V F D SG L+SCS DMS++ WD+ ++ QGH +
Sbjct: 324 DDNLGTEMKVLRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAY 381
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
V + P+S + SAS D+T ++W Y ++ GH V +K P+ LA+ S
Sbjct: 382 PVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGS 441
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
D T R+WS + GH V +A++P
Sbjct: 442 TDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSP 474
Score = 204 (76.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 58/204 (28%), Positives = 88/204 (43%)
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
+K ++GH V FL +S +LS S D +I+ W++ + GH V + +SP
Sbjct: 331 MKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 390
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAAXXXX 299
AS S+D TAR+WS GH V+CV + P +A+ S +
Sbjct: 391 HSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 450
Query: 300 XXXXXX---------------------YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR 338
YLA+ D+ +KLWD+ SG+L L GH + +
Sbjct: 451 TQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNIT 510
Query: 339 GVTFHPGGKYLVSCGDDKTLRVWD 362
+TF P + S D ++RVWD
Sbjct: 511 SLTFSPDSSLVASASMDNSVRVWD 534
Score = 176 (67.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GHR PV+ + F P +AS ED ++LWD +G + L GH D++ + F L
Sbjct: 461 TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL 520
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV 196
+ S S D S+++WD+ + C G + GV
Sbjct: 521 VASASMDNSVRVWDIRSSHCSTPADGSSSELVGV 554
Score = 153 (58.9 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 51/181 (28%), Positives = 76/181 (41%)
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+VSPD LLA+ ++ ++WSL +K+ K+E H V + A E E
Sbjct: 271 EVSPDSKLLAAGFDNSCIKLWSLRSKKLKSE--PHQVDVSRIHLACDFLEEEDDEDDNLG 328
Query: 299 XXXX----------XXXYLA--TG----SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
+LA +G S D +I+ WD+GS + GH V +
Sbjct: 329 TEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 388
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
P Y S D+T R+W ++ H V + FH Y+ TGS DKTV++
Sbjct: 389 SPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 403 W 403
W
Sbjct: 449 W 449
Score = 147 (56.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y A+ S D+T +LW L GH V V FHP YL + DKT+R+W T
Sbjct: 394 YFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQ 453
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++ H V SL F Y+ + D+ +K+W+
Sbjct: 454 GNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWD 492
Score = 44 (20.5 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 6/17 (35%), Positives = 13/17 (76%)
Query: 307 LATGSRDKTIKLWDVGS 323
+A+ S D ++++WD+ S
Sbjct: 521 VASASMDNSVRVWDIRS 537
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 93/321 (28%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P F ++ S S D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKT-LEAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDT-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D ++VW+
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQ 311
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 76/231 (32%), Positives = 109/231 (47%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH VT +A P D +LSASRDKTI MW++ T Y + + L GH +V +
Sbjct: 10 TLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S D T R+W L T T GH V VA++
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFS--------------- 114
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ H WV V F P +VSCG
Sbjct: 115 ---ADNRQIVSGSRDKTIKLWNT-LGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKMVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 249 (92.7 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 65/192 (33%), Positives = 93/192 (48%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H V+ V F PNS ++S DK
Sbjct: 114 SADNRQIVSGSRDKTIKLWN-TLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+K+W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 MVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D T+ + ++P
Sbjct: 233 GD-TINALCFSP 243
Score = 156 (60.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 58/226 (25%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKMVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K ELR T
Sbjct: 222 NEGKHLYTLDGG-DTINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELRQDIITTNS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D I++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLIRVWQVTIGT 316
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 301 (111.0 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 73/245 (29%), Positives = 113/245 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W + G L H + + +++ G ++S D + +WD
Sbjct: 238 TLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + ++ +KT GH V I
Sbjct: 297 TGEAKQLFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ +L+ H+ + + W+P S A
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNA---- 411
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S D T++LWDV G + TL H V V F P G+YL S DK +
Sbjct: 412 -----NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 359 RVWDT 363
+W+T
Sbjct: 467 HIWNT 471
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 72/270 (26%), Positives = 119/270 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + QS
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDW-QSNN 320
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P + + S S D T+K+W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQ 380
Query: 222 GYCVKTLTGHREWVRQIKVSPDGT---------LLASCSNDHTARVWSLATKETKAELRG 272
CV L H + + IK SP G +LAS S D T R+W + L
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
H V VA++P YLA+GS DK + +W+ +G+L+ + G
Sbjct: 441 HQEPVYSVAFSPD------------------GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V ++ G + + D ++ V D
Sbjct: 483 TGG-IFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 233 (87.1 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 87/331 (26%), Positives = 133/331 (40%)
Query: 97 PEK-FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERAL-H----G 146
P K L GH S V ++PV L+AS S D+T R+W+ +G + L H G
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREG 218
Query: 147 HLD--SVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
D S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKK 277
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+F+LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 278 GNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKL 336
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDP------------------TGNLLASCSDDMTLKIWSM 378
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H+ + + + P G L S D T+R+WD + TL
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 68/276 (24%), Positives = 108/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W++S + G V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSE----NSTSGSTQLVLRHCIREGGQ 220
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
V S ++D T W + G + T G + +I DG L AS H +++L
Sbjct: 221 DVPS-NKDVTSLDWN-SEGTLLAT--GSYDGFARIWTK-DGNL-ASTLGQHKGPIFALKW 274
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASE--SISEAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 275 NKKGNFILSAGVDKTT--IIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AH+
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 393 EIYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWD 428
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 220 (82.5 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 54/214 (25%), Positives = 95/214 (44%)
Query: 123 SCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182
+C+ I + D + + G D++ +A KLL S +++WD+ T +C
Sbjct: 35 ACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKC 94
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
+++ +GH+ V G+A + + +A D+ + +W+V G+C GH+ V I P
Sbjct: 95 IRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHP 154
Query: 243 DGT--LLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXX 300
D +L S S+D T RVW L K T+ + C+A + + S
Sbjct: 155 DSNKNILISGSDDATVRVWDLNAKNTEKK---------CLA----IMEKHFSAVTSIALS 201
Query: 301 XXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+ G RDK + LWD+ S T+ ++
Sbjct: 202 EDGLTLFSAG-RDKVVNLWDLHDYSCKATVATYE 234
Score = 217 (81.4 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 103 SGHRSPVIKVIF-HPVFSLMASCSEDATIRLWDYE--TGEYERALH--------GHLDSV 151
+GH ++ V F FS S S D T+++W + + + E ++ H +
Sbjct: 443 TGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDI 502
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
+A ++ L+ + S D + +W + + T++GH + V F V++AS D
Sbjct: 503 NSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGD 562
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR 271
KT+K+W ++ G C+KT GH V + DGT SC D ++W++ T E A
Sbjct: 563 KTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYD 622
Query: 272 GHDHTVECVAWAPGVASES 290
H+ V WA V ++
Sbjct: 623 QHEDKV----WALAVGKKT 637
Score = 214 (80.4 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 63/268 (23%), Positives = 119/268 (44%)
Query: 142 RALHGHLDSVQDIAF--DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL 199
+ L G+ + + D+ F D+ L V+ + + ++++D++T C + GH V +
Sbjct: 352 KRLVGYNEEIADMKFLGDEEQFLAVATNLE-EVRVYDVATMSCSYVLAGHKEVVLSLDTC 410
Query: 200 PNSD---FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHT 255
+S +++ S+DKT+++W + C+ TGH + + + + S S D T
Sbjct: 411 VSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRT 470
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKT 315
+VWSL +E + T VA + I+ A + TGS D+T
Sbjct: 471 LKVWSLDGISEDSEEPINLKTRSVVA----AHDKDINSVAVARNDSL----VCTGSEDRT 522
Query: 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W + + TL GH + V F + +++ DKT+++W ++ +KT E H
Sbjct: 523 ASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGH 582
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V F V+ D +K+W
Sbjct: 583 TSSVLRASFITDGTQFVSCGADGLLKLW 610
Score = 209 (78.6 bits), Expect = 6.1e-25, Sum P(2) = 6.1e-25
Identities = 61/240 (25%), Positives = 101/240 (42%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K + G + + P L+ S IR+WD ET + R+ GH V +A
Sbjct: 53 KSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHA 112
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP--NSDFVLSASRDKTIKM 216
SG LL + AD + +WD+ C +GH V+ + F P N + ++S S D T+++
Sbjct: 113 SGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRV 172
Query: 217 WEV----ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
W++ C+ + H V I +S DG L S D +W L KA +
Sbjct: 173 WDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVAT 232
Query: 273 HD--HTVECVA----WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL 326
++ V V+ +A VAS ++ ++ G R +++W GS+
Sbjct: 233 YEVLEAVTTVSSGTPFASFVASLDQKKSKKKESDSQATYFITVGERG-VVRIWK-SEGSI 290
Score = 190 (71.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+ + SED T +W + L GH + + F + +++ S D ++K+W +S
Sbjct: 512 SLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAIS 571
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
CLKT +GH +V +F+ + +S D +K+W V T C+ T H + V +
Sbjct: 572 DGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWAL 631
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAE 269
V ++A+ D +W +T K +
Sbjct: 632 AVGKKTEMIATGGGDAVINLWHDSTASDKED 662
Score = 188 (71.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 39/136 (28%), Positives = 64/136 (47%)
Query: 87 RSPTEW-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
R+ + W +P L GH+ + V F V + + S D T+++W G +
Sbjct: 521 RTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFE 580
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH SV +F G VSC AD LKLW+++T +C+ T H+ V +A ++ +
Sbjct: 581 GHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMI 640
Query: 206 LSASRDKTIKMWEVAT 221
+ D I +W +T
Sbjct: 641 ATGGGDAVINLWHDST 656
Score = 173 (66.0 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 59/218 (27%), Positives = 92/218 (42%)
Query: 195 GVAFLPNSD-FVLSASRDKTIKMWEVATGYCVK-TLTGHREWVRQIKVSPDGTLLASCSN 252
G F+ +SD ++ + I + + +T VK T+ G + + + +SPD LL S +
Sbjct: 22 GGPFIVSSDGSFIACACGDVINIVD-STDSSVKSTIEGESDTLTALALSPDDKLLFSAGH 80
Query: 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSR 312
RVW L T + +GH+ V G+A + LAT
Sbjct: 81 SRQIRVWDLETLKCIRSWKGHEGPVM------GMACHA------------SGGLLATAGA 122
Query: 313 DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWD----TANK 366
D+ + +WDV G GH V + FHP L+S DD T+RVWD K
Sbjct: 123 DRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEK 182
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ + +E H VTS+ + + DK V +W+
Sbjct: 183 KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWD 220
Score = 169 (64.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 47/203 (23%), Positives = 88/203 (43%)
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++C+ + + D + T++G +T +A P+ + SA + I++W++ T
Sbjct: 34 IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLK 93
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
C+++ GH V + G LLA+ D VW + RGH V + +
Sbjct: 94 CIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFH 153
Query: 284 PGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL----LFTLIGHDNWVRG 339
P ++++I L +GS D T+++WD+ + + L + H + V
Sbjct: 154 PD-SNKNI---------------LISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTS 197
Query: 340 VTFHPGGKYLVSCGDDKTLRVWD 362
+ G L S G DK + +WD
Sbjct: 198 IALSEDGLTLFSAGRDKVVNLWD 220
Score = 151 (58.2 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
Identities = 31/95 (32%), Positives = 46/95 (48%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368
T S DKT+K+W + GS L T GH + V +F G VSCG D L++W+
Sbjct: 558 TASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSEC 617
Query: 369 MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ T + H V +L + + TG D + +W
Sbjct: 618 IATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 292 (107.8 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 60/174 (34%), Positives = 87/174 (50%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV F P + SCSED T RLW ET GH V D++F G
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYF 736
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S D + +LW + L+ GH + V F PN +++ + S DK+ ++WE+ TG
Sbjct: 737 ATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGK 796
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
CV+ GHR + + SPDG LLA+ D + +W L+T + ++ GH V
Sbjct: 797 CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCV 850
Score = 253 (94.1 bits), Expect = 6.7e-19, Sum P(2) = 6.7e-19
Identities = 54/158 (34%), Positives = 82/158 (51%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV V F P A+ S D T RLW R GHL + F + L
Sbjct: 719 GHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYL 778
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S D S +LW++ T +C++ GH + VAF P+ + +A D ++ +W+++TG
Sbjct: 779 ATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGK 838
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
VK + GH + V + S DG++LAS S+D T R+W +
Sbjct: 839 KVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDV 876
Score = 210 (79.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 42/121 (34%), Positives = 66/121 (54%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH S V FHP + +A+ S D + RLW+ +TG+ R GH + +AF G+L
Sbjct: 760 TGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRL 819
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + D S+ LWD+ST + +K M GH V + F + + S S D T+++W+V
Sbjct: 820 LATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKA 879
Query: 223 Y 223
+
Sbjct: 880 F 880
Score = 199 (75.1 bits), Expect = 1.8e-18, Sum P(3) = 1.8e-18
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
E++ L GH V +F + L+SCS D + +LW M T L +GH+ V V+F
Sbjct: 671 EFKTFL-GHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSF 729
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
P + +AS D+T ++W ++ TGH ++ P+ LA+ SND +AR+
Sbjct: 730 SPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARL 789
Query: 259 WSLATKETKAELRGHDHTVECVAWAP 284
W + T + GH + VA++P
Sbjct: 790 WEIQTGKCVRIFMGHRAPIYTVAFSP 815
Score = 193 (73.0 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 35/101 (34%), Positives = 61/101 (60%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLATGS DK+ +LW++ +G + +GH + V F P G+ L + G+D ++ +WD +
Sbjct: 777 YLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLST 836
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +K ++ H+ V SLDF + +GS D TV++W+ +
Sbjct: 837 GKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVK 877
Score = 151 (58.2 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL + S D T +LW + + S L GH+ V V+F P G Y + D+T R+W T +
Sbjct: 693 YLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNH 752
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H ++ FH Y+ TGS DK+ ++WE
Sbjct: 753 ISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWE 791
Score = 147 (56.8 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 39/124 (31%), Positives = 55/124 (44%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L S S+ S KL KT GH V G +F P+S ++LS S D T ++W + T
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ GH V + SP G A+ S+D TAR+W+ GH V +
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRF 771
Query: 283 APGV 286
P +
Sbjct: 772 HPNI 775
Score = 140 (54.3 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 31/97 (31%), Positives = 46/97 (47%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS + KL S T +GH V G +F P +YL+SC +D T R+W
Sbjct: 652 LNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYLLSCSEDTTARLWSMETM 711
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
N+ + H+ V + F Y T S D+T ++W
Sbjct: 712 SNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTARLW 748
Score = 125 (49.1 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 28/99 (28%), Positives = 46/99 (46%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y AT S D+T +LW S L GH + V FHP YL + +DK+ R+W+
Sbjct: 735 YFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQT 794
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ ++ H + ++ F + T D +V +W+
Sbjct: 795 GKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWD 833
Score = 99 (39.9 bits), Expect = 1.8e-18, Sum P(3) = 1.8e-18
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LAT D ++ LWD+ +G + + GH V + F G L S D T+R+WD
Sbjct: 820 LATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDGSILASGSSDCTVRLWDVKKA 879
Query: 367 RN 368
N
Sbjct: 880 FN 881
Score = 52 (23.4 bits), Expect = 5.9e-13, Sum P(3) = 5.9e-13
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
C T+ + + +S D L+A +D + ++W+L KE K +
Sbjct: 550 CFYTIFNTYQGLNTTDISKDAQLVAGGFSDSSVKIWNL--KEMKEQ 593
Score = 42 (19.8 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 2 VLSQRQREELNKAVADYLLSNGYLSA 27
V S + +++ + AV +YL GY +A
Sbjct: 182 VKSAQTKDKYDLAVLNYLRKKGYTNA 207
Score = 38 (18.4 bits), Expect = 1.5e-11, Sum P(3) = 1.5e-11
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 153 DIAFDQSGKLLVSCSADMSLKLWDMSTY--------QCLKTMQGHDHNVTGVAFLPNSDF 204
DI+ D +L+ +D S+K+W++ Q + Q N + N +F
Sbjct: 565 DISKD--AQLVAGGFSDSSVKIWNLKEMKEQRLQQQQQQQQQQQQQQNSNQNGYFENGNF 622
Query: 205 VLSAS 209
SAS
Sbjct: 623 ASSAS 627
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 81/267 (30%), Positives = 129/267 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V+++ ++ S++ S S D T+ +WD ETGE + L GH V + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 162 LLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
LV S D ++KLWD+ ++T Q + + V V F SD ++S D IK+W++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-RGHDHT 276
T+ GH + V + +S +G+ L S + D+T RVW + A KE ++ +G+ H
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 277 VE-----CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
E C +W+P + +A GS D+ + +WD S +L+ L
Sbjct: 285 FEKNLLRC-SWSPDGSK------------------IAAGSADRFVYVWDTTSRRILYKLP 325
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTL 358
GH + V FHP ++S DK L
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 162 (62.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 40/102 (39%), Positives = 54/102 (52%)
Query: 307 LATGSRDKTIKLWDV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
LA+ D+ I LW+V G TL GH V + ++ G L S DKT+ VWD+
Sbjct: 82 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406
+K L+ H+ FV S R P +V TGS D TVK+W+ R
Sbjct: 142 GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Score = 156 (60.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+KLWD+ + + T + V VTF+ ++S G D ++VWD
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ T+ H+ VT L Y+++ ++D TV+VW+ R
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 150 (57.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V F +G L S D + LW++ C T++GH V + + +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTD 121
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWS 260
+ SAS DKT+ +W+ TG VK L GH +V + G L+ + S+D T ++W
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 261 LATKETKAELRGHDHTVECVA 281
+ KA ++ +T + +A
Sbjct: 182 I---RKKAAIQTFQNTYQVLA 199
Score = 133 (51.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
+ +G D IK+WD+ L +T+ GH + V G++ G YL+S D T+RVWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 365 --NKRNMKTLEAHSH-FVTSL---DFHRAHPYVVTGSVDKTVKVWE 404
+R +K + + H F +L + + GS D+ V VW+
Sbjct: 269 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERAL---HGHLDSVQD-- 153
+ + GH V + S + S + D T+R+WD ER + G++ + +
Sbjct: 230 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Query: 154 --IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
++ G + + SAD + +WD ++ + L + GH ++ VAF P+ +LSAS D
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Query: 212 KTIKMWEV 219
K + M E+
Sbjct: 350 KRLYMGEI 357
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-ANKRNMKTLEAHSHFVTSLDFH 385
+ L GH+ V FHP G L S G D+ + +W+ + N TL+ HS V L ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + S DKTV VW+
Sbjct: 120 TDGSMLFSASTDKTVAVWD 138
Score = 67 (28.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTV 277
+ L+GH V K P+G+ LAS D +W++ + A L+GH V
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 113
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 81/267 (30%), Positives = 129/267 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V+++ ++ S++ S S D T+ +WD ETGE + L GH V + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 162 LLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
LV S D ++KLWD+ ++T Q + + V V F SD ++S D IK+W++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-RGHDHT 276
T+ GH + V + +S +G+ L S + D+T RVW + A KE ++ +G+ H
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 277 VE-----CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
E C +W+P + +A GS D+ + +WD S +L+ L
Sbjct: 285 FEKNLLRC-SWSPDGSK------------------IAAGSADRFVYVWDTTSRRILYKLP 325
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTL 358
GH + V FHP ++S DK L
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 162 (62.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 40/102 (39%), Positives = 54/102 (52%)
Query: 307 LATGSRDKTIKLWDV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
LA+ D+ I LW+V G TL GH V + ++ G L S DKT+ VWD+
Sbjct: 82 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406
+K L+ H+ FV S R P +V TGS D TVK+W+ R
Sbjct: 142 GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Score = 156 (60.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+KLWD+ + + T + V VTF+ ++S G D ++VWD
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ T+ H+ VT L Y+++ ++D TV+VW+ R
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 150 (57.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V F +G L S D + LW++ C T++GH V + + +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTD 121
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWS 260
+ SAS DKT+ +W+ TG VK L GH +V + G L+ + S+D T ++W
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 261 LATKETKAELRGHDHTVECVA 281
+ KA ++ +T + +A
Sbjct: 182 I---RKKAAIQTFQNTYQVLA 199
Score = 133 (51.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
+ +G D IK+WD+ L +T+ GH + V G++ G YL+S D T+RVWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 365 --NKRNMKTLEAHSH-FVTSL---DFHRAHPYVVTGSVDKTVKVWE 404
+R +K + + H F +L + + GS D+ V VW+
Sbjct: 269 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERAL---HGHLDSVQD-- 153
+ + GH V + S + S + D T+R+WD ER + G++ + +
Sbjct: 230 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Query: 154 --IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
++ G + + SAD + +WD ++ + L + GH ++ VAF P+ +LSAS D
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Query: 212 KTIKMWEV 219
K + M E+
Sbjct: 350 KRLYMGEI 357
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-ANKRNMKTLEAHSHFVTSLDFH 385
+ L GH+ V FHP G L S G D+ + +W+ + N TL+ HS V L ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + S DKTV VW+
Sbjct: 120 TDGSMLFSASTDKTVAVWD 138
Score = 67 (28.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTV 277
+ L+GH V K P+G+ LAS D +W++ + A L+GH V
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 113
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 301 (111.0 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 75/245 (30%), Positives = 111/245 (45%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 247 TLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAH 305
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + + VKT GH V I
Sbjct: 306 TGEAKQQFPFHSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 364
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ +L+ H + + W+P S +
Sbjct: 365 KWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNS---- 420
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S D T++LWDV G + TL H V V F P GKYL S DK +
Sbjct: 421 -----NIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCV 475
Query: 359 RVWDT 363
+W+T
Sbjct: 476 HIWNT 480
Score = 263 (97.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 66/187 (35%), Positives = 91/187 (48%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H +P + V + + ASCS D I + + GH + V I +D SG LL
Sbjct: 316 HSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 374
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNV-------TGVAFL-PNSDFVL-SASRDKTIK 215
SCS DM+LK+W M C+ +Q H + TG PNS+ +L SAS D T++
Sbjct: 375 SCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVR 434
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G C+ TLT H+E V + SPDG LAS S D +W+ + RG
Sbjct: 435 LWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRGTGG 494
Query: 276 TVECVAW 282
E V W
Sbjct: 495 IFE-VCW 500
Score = 234 (87.4 bits), Expect = 4.8e-17, P = 4.8e-17
Identities = 86/331 (25%), Positives = 133/331 (40%)
Query: 97 PEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERAL-H----- 145
P K L GH S V ++PV L+AS S D+T R+W+ +G + L H
Sbjct: 168 PNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREG 227
Query: 146 GH-LDSVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
GH + S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 228 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNKK 286
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+++LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 287 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRL 345
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 346 GCDRPVKTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSM 387
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H + + + P G L S D T+R+WD + TL
Sbjct: 388 KQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTL 447
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 448 TKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 478
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 61/231 (26%), Positives = 104/231 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + Q+
Sbjct: 271 LGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNT 329
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P+ + S S D T+K+W +
Sbjct: 330 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 389
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
CV L H + + IK SP G SN ++ + + A+ ++ L D V C+
Sbjct: 390 DTCVHDLQAHSKEIYTIKWSPTGP---GTSNPNSNIMLASASFDSTVRLWDVDRGV-CIH 445
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
E YLA+GS DK + +W+ SG+L+ + G
Sbjct: 446 -----TLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRG 491
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 68/276 (24%), Positives = 108/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G V
Sbjct: 174 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNE----NSNSGSTQLVLRHCIREGGH 229
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
V S ++D T W + G + T G + +I DG L AS H +++L
Sbjct: 230 DVPS-NKDVTSLDWN-SDGTLLAT--GSYDGFARIWTE-DGNL-ASTLGQHKGPIFALKW 283
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 284 NKKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 341
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AHS
Sbjct: 342 VCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSK 401
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 402 EIYTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWD 437
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 78/262 (29%), Positives = 127/262 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V+++ ++ S++ S S D T+ +WD ETGE + L GH V + G
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP 164
Query: 162 LLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
LV S D ++KLWD+ ++T Q + + V V F SD ++S D IK+W++
Sbjct: 165 QLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 223
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-RGHDHT 276
T+ GH + V + +S +G+ L S + D+T RVW + A KE ++ +G+ H
Sbjct: 224 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 283
Query: 277 VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336
E +++ + +A GS D+ + +WD S +L+ L GH
Sbjct: 284 FE----------KNLLRCSWSPDGSK----IAAGSADRFVYVWDTTSRRILYKLPGHAGS 329
Query: 337 VRGVTFHPGGKYLVSCGDDKTL 358
+ V FHP ++S DK L
Sbjct: 330 INEVAFHPDEPIIISASSDKRL 351
Score = 162 (62.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 40/102 (39%), Positives = 54/102 (52%)
Query: 307 LATGSRDKTIKLWDV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
LA+ D+ I LW+V G TL GH V + ++ G L S DKT+ VWD+
Sbjct: 81 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 140
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406
+K L+ H+ FV S R P +V TGS D TVK+W+ R
Sbjct: 141 GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 182
Score = 156 (60.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+KLWD+ + + T + V VTF+ ++S G D ++VWD
Sbjct: 167 VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ T+ H+ VT L Y+++ ++D TV+VW+ R
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 265
Score = 150 (57.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V F +G L S D + LW++ C T++GH V + + +
Sbjct: 62 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTD 120
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWS 260
+ SAS DKT+ +W+ TG VK L GH +V + G L+ + S+D T ++W
Sbjct: 121 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 180
Query: 261 LATKETKAELRGHDHTVECVA 281
+ KA ++ +T + +A
Sbjct: 181 I---RKKAAIQTFQNTYQVLA 198
Score = 133 (51.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
+ +G D IK+WD+ L +T+ GH + V G++ G YL+S D T+RVWD
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 267
Query: 365 --NKRNMKTLEAHSH-FVTSL---DFHRAHPYVVTGSVDKTVKVWE 404
+R +K + + H F +L + + GS D+ V VW+
Sbjct: 268 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD 313
Score = 125 (49.1 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/128 (25%), Positives = 62/128 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERAL---HGHLDSVQD-- 153
+ + GH V + S + S + D T+R+WD ER + G++ + +
Sbjct: 229 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 288
Query: 154 --IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
++ G + + SAD + +WD ++ + L + GH ++ VAF P+ ++SAS D
Sbjct: 289 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSD 348
Query: 212 KTIKMWEV 219
K + M E+
Sbjct: 349 KRLYMGEI 356
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-ANKRNMKTLEAHSHFVTSLDFH 385
+ L GH+ V FHP G L S G D+ + +W+ + N TL+ HS V L ++
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 118
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + S DKTV VW+
Sbjct: 119 TDGSMLFSASTDKTVAVWD 137
Score = 67 (28.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTV 277
+ L+GH V K P+G+ LAS D +W++ + A L+GH V
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 112
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 81/267 (30%), Positives = 128/267 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V+++ ++ S++ S S D T+ +WD ETGE + L GH V + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 162 LLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
LV S D ++KLWD+ ++T Q + + V V F SD ++S D IK+W++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-RGHDHT 276
T+ GH + V + +S +G+ L S + D+T RVW + A KE + +G+ H
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHN 284
Query: 277 VE-----CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
E C +W+P + +A GS D+ + +WD S +L+ L
Sbjct: 285 FEKNLLRC-SWSPDGSK------------------IAAGSADRFVYVWDTTSRRILYKLP 325
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTL 358
GH + V FHP ++S DK L
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 162 (62.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 40/102 (39%), Positives = 54/102 (52%)
Query: 307 LATGSRDKTIKLWDV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
LA+ D+ I LW+V G TL GH V + ++ G L S DKT+ VWD+
Sbjct: 82 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406
+K L+ H+ FV S R P +V TGS D TVK+W+ R
Sbjct: 142 GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Score = 156 (60.0 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+KLWD+ + + T + V VTF+ ++S G D ++VWD
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ T+ H+ VT L Y+++ ++D TV+VW+ R
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 150 (57.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V F +G L S D + LW++ C T++GH V + + +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTD 121
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWS 260
+ SAS DKT+ +W+ TG VK L GH +V + G L+ + S+D T ++W
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 261 LATKETKAELRGHDHTVECVA 281
+ KA ++ +T + +A
Sbjct: 182 I---RKKAAIQTFQNTYQVLA 199
Score = 130 (50.8 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
+ +G D IK+WD+ L +T+ GH + V G++ G YL+S D T+RVWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 365 --NKRNMKTLEAHSH-FVTSL---DFHRAHPYVVTGSVDKTVKVWE 404
+R ++ + + H F +L + + GS D+ V VW+
Sbjct: 269 APKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERALH---GHLDSVQD-- 153
+ + GH V + S + S + D T+R+WD ER + G++ + +
Sbjct: 230 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNL 289
Query: 154 --IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
++ G + + SAD + +WD ++ + L + GH ++ VAF P+ +LSAS D
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSD 349
Query: 212 KTIKMWEV 219
K + M E+
Sbjct: 350 KRLYMGEI 357
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-ANKRNMKTLEAHSHFVTSLDFH 385
+ L GH+ V FHP G L S G D+ + +W+ + N TL+ HS V L ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + S DKTV VW+
Sbjct: 120 TDGSMLFSASTDKTVAVWD 138
Score = 67 (28.6 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTV 277
+ L+GH V K P+G+ LAS D +W++ + A L+GH V
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 113
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 83/289 (28%), Positives = 142/289 (49%)
Query: 99 KFALSGHRSPVIKVIFHPVFS--LMASCSEDATIRLW-----DYETGEYERALHGHLDSV 151
K + H + ++ I P+ + ++ S S D +I LW D G +R L GH V
Sbjct: 8 KGTMRAH-TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFV 66
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
+D+ G+ +S S D L+LWD++ + GH +V VAF ++ ++SASRD
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD 126
Query: 212 KTIKMWEVATGYCVKTLT----GHREWVRQIKVSPDGTL---LASCSNDHTARVWSLATK 264
+TIK+W G C T++ GHR+WV ++ SP+ TL + S S D T +VW+L+
Sbjct: 127 RTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPN-TLQPTIVSASWDKTVKVWNLSNC 184
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG 324
+ ++ L GH V VA +P A+G +D + LWD+ G
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD------------------GSLCASGGKDGVVLLWDLAEG 226
Query: 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
L++L + + + + F P +Y + + +++WD +K ++ L+
Sbjct: 227 KKLYSLEAN-SVIHALCFSPN-RYWLCAATEHGIKIWDLESKSIVEDLK 273
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 78/270 (28%), Positives = 123/270 (45%)
Query: 144 LHGHLDSVQDIAFD-QSGKLLVSCSADMSLKLW----DMSTYQCL-KTMQGHDHNVTGVA 197
+ H D V IA + ++VS S D S+ LW D Y + + GH H V V
Sbjct: 11 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVV 70
Query: 198 FLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257
+ F LS S D +++W++A G + GH + V + S D + S S D T +
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 258 VWSLA--TKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDK 314
+W+ K T +E GH V CV ++P +I A S DK
Sbjct: 131 LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA----------------SWDK 174
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
T+K+W++ + L TL GH +V V P G S G D + +WD A + + +LEA
Sbjct: 175 TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA 234
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+S + +L F + Y + + + +K+W+
Sbjct: 235 NS-VIHALCFS-PNRYWLCAATEHGIKIWD 262
Score = 182 (69.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 55/229 (24%), Positives = 99/229 (43%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL----HGHLDSVQDIAFDQS 159
GH V+ V F + S S D TI+LW+ GE + + GH D V + F +
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 160 G--KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+VS S D ++K+W++S + T+ GH V+ VA P+ S +D + +W
Sbjct: 162 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK----ETKAELRGH 273
++A G + +L + + + SP+ L + + +H ++W L +K + K +L+
Sbjct: 222 DLAEGKKLYSLEANSV-IHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAE 279
Query: 274 DHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVG 322
+ P + L +G D I++W +G
Sbjct: 280 AEKADNSG--PAATKRKVIYCTSLNWSADGST-LFSGYTDGVIRVWGIG 325
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/179 (26%), Positives = 78/179 (43%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAEL---RGHDHTVECVAW-------APGVASESI- 291
+G +L HT V ++AT A++ D ++ + W A GVA +
Sbjct: 3 EGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSI--ILWKLTKDDKAYGVAQRRLT 60
Query: 292 --SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYL 349
S + +GS D ++LWD+ +G +GH V V F + +
Sbjct: 61 GHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQI 120
Query: 350 VSCGDDKTLRVWDTANKRNMKTLEA---HSHFVTSLDF--HRAHPYVVTGSVDKTVKVW 403
VS D+T+++W+T + E H +V+ + F + P +V+ S DKTVKVW
Sbjct: 121 VSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 239 (89.2 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 48/151 (31%), Positives = 77/151 (50%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V FHP +TI+LWDY G H+ V+ + F + L VS D +
Sbjct: 17 VAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYT 76
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+K+W ++T +C+ T+ GH + GV+F + +++S S D+TI++W + LTGH
Sbjct: 77 IKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGH 136
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+V + P L+ S S D T RVW ++
Sbjct: 137 NHYVMSAQFHPSEDLIVSASLDQTVRVWDIS 167
Score = 239 (89.2 bits), Expect = 5.6e-17, P = 5.6e-17
Identities = 38/96 (39%), Positives = 66/96 (68%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368
+G D TIK+W + + +FTL GH +++RGV+FH +++SC DD+T+R+W+ N++
Sbjct: 70 SGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQE 129
Query: 369 MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L H+H+V S FH + +V+ S+D+TV+VW+
Sbjct: 130 IACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWD 165
Score = 225 (84.3 bits), Expect = 2.4e-24, Sum P(2) = 2.4e-24
Identities = 39/116 (33%), Positives = 68/116 (58%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H PV V FHP L S +D TI++W T + L+GHLD ++ ++F ++
Sbjct: 52 HVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNGHLDYIRGVSFHHDLPWII 111
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
SCS D ++++W+ Q + + GH+H V F P+ D ++SAS D+T+++W+++
Sbjct: 112 SCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDIS 167
Score = 217 (81.4 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 62/231 (26%), Positives = 105/231 (45%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
LVS + +++LWD + + H V V F P +S D TIK+W + T
Sbjct: 27 LVSLHSS-TIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTR 85
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C+ TL GH +++R + D + SCS+D T R+W+ ++ A L GH+H V +
Sbjct: 86 KCIFTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQF 145
Query: 283 APG---VASESISEAAXX-XXXXXXXXYLA-TGS----RDKT----IKLWDV-GSGSLL- 327
P + S S+ + + A T S D+ + D+ G+ + +
Sbjct: 146 HPSEDLIVSASLDQTVRVWDISGLRKKHSAPTSSVRAFEDQLQRQQLPQQDIFGNINAVV 205
Query: 328 -FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ L GHD V +FHP +VS GDD+ +++W ++ + + H
Sbjct: 206 KYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGH 256
Score = 175 (66.7 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
TI+LWD G+L+ H VR V FHP VS GDD T++VW ++ + TL
Sbjct: 34 TIQLWDYRMGTLIDRFEDHVGPVRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCIFTLNG 93
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H ++ + FH P++++ S D+T+++W
Sbjct: 94 HLDYIRGVSFHHDLPWIISCSDDQTIRIW 122
Score = 165 (63.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 57/187 (30%), Positives = 83/187 (44%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGH-LDS 150
W R E L+GH V+ FHP L+ S S D T+R+WD +G R H S
Sbjct: 124 WQNRQ-EIACLTGHNHYVMSAQFHPSEDLIVSASLDQTVRVWDI-SGL--RKKHSAPTSS 179
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V+ AF+ + D+ + + Y ++GHD V +F P ++SA
Sbjct: 180 VR--AFEDQLQRQQLPQQDIFGNINAVVKY----VLEGHDKGVNYASFHPTLPLIVSAGD 233
Query: 211 DKTIKMWEVAT--GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK-ETK 267
D+ +K+W ++ + V T GH V P L+ S S+D T RVW L + K
Sbjct: 234 DRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWDLNKRVPVK 293
Query: 268 AELRGHD 274
R HD
Sbjct: 294 QFRREHD 300
Score = 160 (61.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 48/187 (25%), Positives = 80/187 (42%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F L+GH + V FH + SCS+D TIR+W+++ + L GH V F S
Sbjct: 89 FTLNGHLDYIRGVSFHHDLPWIISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPS 148
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
L+VS S D ++++WD+S + + H + V + L + ++
Sbjct: 149 EDLIVSASLDQTVRVWDISGLR-----KKHSAPTSSVRAFEDQ---LQRQQLPQQDIFGN 200
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA-TKETKAEL-RGHDHTV 277
L GH + V P L+ S +D ++W ++ TK + + RGH V
Sbjct: 201 INAVVKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNV 260
Query: 278 ECVAWAP 284
+ P
Sbjct: 261 LSAIFHP 267
Score = 147 (56.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/120 (33%), Positives = 58/120 (48%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V +F + L+VS D +KLW MS + + T +GH NV F P+
Sbjct: 209 LEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPH 268
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
D +LS S DKTI++W++ VK + I P +L A+C +D V+ L
Sbjct: 269 QDLILSVSDDKTIRVWDLNKRVPVKQFRREHDRFWLIASHPTISLFAAC-HDSGIMVFKL 327
Score = 131 (51.2 bits), Expect = 4.5e-26, Sum P(2) = 4.5e-26
Identities = 26/79 (32%), Positives = 44/79 (55%)
Query: 328 FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR--NMKTLEAHSHFVTSLDFH 385
+ L GHD V +FHP +VS GDD+ +++W ++ + + T H+ V S FH
Sbjct: 207 YVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFH 266
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+++ S DKT++VW+
Sbjct: 267 PHQDLILSVSDDKTIRVWD 285
Score = 120 (47.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 27/91 (29%), Positives = 40/91 (43%)
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
L + GVAF P + L + TI++W+ G + H VR + P
Sbjct: 4 LTKFESKSSRAKGVAFHPKRPWALVSLHSSTIQLWDYRMGTLIDRFEDHVGPVRSVDFHP 63
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGH 273
L S +D+T +VWSL T++ L GH
Sbjct: 64 TQPLFVSGGDDYTIKVWSLNTRKCIFTLNGH 94
Score = 103 (41.3 bits), Expect = 3.8e-23, Sum P(2) = 3.8e-23
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
+ + D+ +KLW + + T GH V FHP ++S DDKT+RVWD
Sbjct: 228 IVSAGDDRVVKLWRMSDTKAWEVDTCRGHTGNVLSAIFHPHQDLILSVSDDKTIRVWDL- 286
Query: 365 NKR 367
NKR
Sbjct: 287 NKR 289
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 292 (107.8 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 82/323 (25%), Positives = 139/323 (43%)
Query: 91 EWIPRAPEKFALSGHRSPVIKVIFHPVFSL----MASCSEDATIRLWDYETGEYERALHG 146
EWI + K P ++H FS +ASC D T++++ ETGE +
Sbjct: 596 EWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA 655
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
H D V AF + +CSAD +K+WD +T + + T H V F S+ +L
Sbjct: 656 HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLL 715
Query: 207 SA--SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
A S D +K+W++ C T+ GH V + SPD LLASCS D T R+W + +
Sbjct: 716 LATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG 324
+ + V+ + E + + +++K + L+D+ +
Sbjct: 776 NERKSIN-----VKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVL-LFDIHTS 829
Query: 325 SLLFTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLD 383
LL + GH + ++ F P V + +W+ ++ + H +V +
Sbjct: 830 GLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVM 889
Query: 384 FHRAHPYVVTGSVDKTVKVWECR 406
F +T S D+T++VWE +
Sbjct: 890 FSPDGSSFLTASDDQTIRVWETK 912
Score = 232 (86.7 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
Identities = 73/256 (28%), Positives = 110/256 (42%)
Query: 116 PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW 175
P +A ED I++ + + GH +V+ I F GK L+S S D +++W
Sbjct: 971 PHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030
Query: 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV 235
+ T + +Q H V L +S +LS S D T+K+W V TG + T H+ V
Sbjct: 1031 NWQTGDYV-FLQAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTV 1088
Query: 236 RQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAA 295
+S D T +S S D TA++WS EL+GH+ V C A++ + I A
Sbjct: 1089 LSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFS----LDGILLAT 1144
Query: 296 XXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDD 355
++ G + V G+ H WV V F P K LVS G
Sbjct: 1145 GDDNGEIRIWNVSDGQLLHSCAPISVEEGTAT-----HGGWVTDVCFSPDSKTLVSAGG- 1198
Query: 356 KTLRVWDTANKRNMKT 371
L+ W+ A + +T
Sbjct: 1199 -YLKWWNVATGDSSQT 1213
Score = 196 (74.1 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 58/215 (26%), Positives = 97/215 (45%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH+ V + F + S SED+ I++W+++TG+Y L H ++V+D Q +LL
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYV-FLQAHQETVKDFRLLQDSRLL 1059
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++K+W++ T + + H V A ++ S S DKT K+W
Sbjct: 1060 -SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS 1118
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE---TKAELRGHDHTVECV 280
+ L GH VR S DG LLA+ ++ R+W+++ + + A + + T
Sbjct: 1119 PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHG 1178
Query: 281 AWAPGVASESISEAAXXXXXXXXXXYLATGSRDKT 315
W V S+ +ATG +T
Sbjct: 1179 GWVTDVCFSPDSKTLVSAGGYLKWWNVATGDSSQT 1213
Score = 130 (50.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 42/148 (28%), Positives = 69/148 (46%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H+ V+ + +S S D T ++W ++ L GH V+ AF G LL
Sbjct: 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLA 1143
Query: 165 SCSADMSLKLWDMSTYQCLKTM------QG---HDHNVTGVAFLPNSDFVLSASRDKTIK 215
+ + +++W++S Q L + +G H VT V F P+S ++SA +K
Sbjct: 1144 TGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGG--YLK 1201
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPD 243
W VATG +T + +++I VSPD
Sbjct: 1202 WWNVATGDSSQTFYTNGTNLKKIHVSPD 1229
Score = 44 (20.5 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 15 VADYLLSNGYLSALE 29
+ D+++SNG LS +E
Sbjct: 25 IMDHMISNGVLSVIE 39
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 286 (105.7 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 78/256 (30%), Positives = 111/256 (43%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E+ L GH PV F P S + SCSED +IR WD E+ GH V D+
Sbjct: 329 ATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLD 388
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
S S D + +LW L+ GH V V F PNS+++ + S DKT++
Sbjct: 389 ISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVR 448
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W G V+ TGH VR + SP+G L S D ++W LA+ +L GH
Sbjct: 449 LWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHTD 508
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ V ++ + S I+ A+ + + T D S LL G +
Sbjct: 509 DITSVTFS--LDSSVIASASMDNSVRI---WDIKSKHNSTPA--DGSSSELLGVYTGQMS 561
Query: 336 WVRGVTFHPGGKYLVS 351
V V F G + LV+
Sbjct: 562 TVLNVQFMAGSRLLVT 577
Score = 238 (88.8 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 77/270 (28%), Positives = 122/270 (45%)
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
KLL + + S+KLW +++ K+ + H +V+ + + +D + D+T A
Sbjct: 281 KLLATGLNNSSIKLWSLTSK--FKS-KPHQIDVSHIHLI--NDTLEVDEEDRT------A 329
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
T K L GH V + PD + L SCS D + R W L + +GH + V +
Sbjct: 330 TER--KVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDL 387
Query: 281 AWAPG---VASESISEAAXXXXXXXX---------------------XXYLATGSRDKTI 316
+P AS S A YLATGS DKT+
Sbjct: 388 DISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTV 447
Query: 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS 376
+LW G+ + GH VR + F P G+YLVS G+D+ L++WD A+ K L H+
Sbjct: 448 RLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDLHGHT 507
Query: 377 HFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+TS+ F + + S+D +V++W+ +
Sbjct: 508 DDITSVTFSLDSSVIASASMDNSVRIWDIK 537
Score = 210 (79.0 bits), Expect = 3.6e-23, Sum P(3) = 3.6e-23
Identities = 47/148 (31%), Positives = 69/148 (46%)
Query: 137 TGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV 196
T + L GH V F L+SCS D S++ WD+ ++ QGH + V +
Sbjct: 328 TATERKVLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDL 387
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
P+S F SAS D T ++W Y ++ GH V +K P+ LA+ S D T
Sbjct: 388 DISPHSLFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTV 447
Query: 257 RVWSLATKETKAELRGHDHTVECVAWAP 284
R+WS + GH V C+A++P
Sbjct: 448 RLWSAQQGNSVRLFTGHCGPVRCLAFSP 475
Score = 135 (52.6 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 48/180 (26%), Positives = 75/180 (41%)
Query: 239 KVSPDGTLLASCSNDHTARVWSLATK-ETKAELR--GHDH----TVECVAWAPGVASES- 290
+ SPD LLA+ N+ + ++WSL +K ++K H H T+E V A+E
Sbjct: 275 EASPDNKLLATGLNNSSIKLWSLTSKFKSKPHQIDVSHIHLINDTLE-VDEEDRTATERK 333
Query: 291 --ISEAAXXXXXXXX--XXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG 346
+ L + S D +I+ WD+ S + GH V + P
Sbjct: 334 VLLGHCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVWDLDISPHS 393
Query: 347 KYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ S D T R+W ++ H V + FH Y+ TGS DKTV++W +
Sbjct: 394 LFFASASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQ 453
Score = 126 (49.4 bits), Expect = 3.6e-23, Sum P(3) = 3.6e-23
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL + D+ +KLWD+ SG+L L GH + + VTF + S D ++R+WD +
Sbjct: 479 YLVSAGEDQLLKLWDLASGTLYKDLHGHTDDITSVTFSLDSSVIASASMDNSVRIWDIKS 538
Query: 366 KRNMKTLEAHS 376
K N + S
Sbjct: 539 KHNSTPADGSS 549
Score = 38 (18.4 bits), Expect = 4.6e-26, Sum P(2) = 4.6e-26
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 3 LSQRQREELNKAVADYLLSNGYLSA 27
+ + + EE+ AV+ YL S Y A
Sbjct: 1 MEEFRTEEMQTAVSCYLKSRQYRGA 25
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 307 (113.1 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 76/262 (29%), Positives = 120/262 (45%)
Query: 108 PVIKVIFHPVFS----LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
P ++H FS +ASC D T++++ ETGE + H D V AF + +
Sbjct: 613 PHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFI 672
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA--SRDKTIKMWEVAT 221
+CS D +K+W+ T + + T H V F +S +L A S D +K+W++
Sbjct: 673 ATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQ 732
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
C T+ GH V + SPD LLASCS D T ++W + + + +
Sbjct: 733 KECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLED 792
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341
P E I + + +++K I LW+ S S + GH +WV GV
Sbjct: 793 --PQEDMEVIVKCCSWSADGAR---IMVAAKNK-IFLWNTDSRSKVADCRGHLSWVHGVM 846
Query: 342 FHPGGKYLVSCGDDKTLRVWDT 363
F P G ++ DD+T+R+W+T
Sbjct: 847 FSPDGSSFLTSSDDQTIRLWET 868
Score = 204 (76.9 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 70/275 (25%), Positives = 121/275 (44%)
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
H D+V F + G+ + SC AD +L+++ T + L ++ H+ V AF + F+
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 207 SASRDKTIKMWEVATGYCVKTLTGHREWVR--QIKVSPDGTLLASCSNDHTARVWSLATK 264
+ S DK +K+W TG V T H E V S LLA+ S+D ++W L K
Sbjct: 674 TCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQK 733
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG 324
E + + GH ++V ++P + + LA+ S D T+KLWD S
Sbjct: 734 ECRNTMFGHTNSVNHCRFSP---DDKL---------------LASCSADGTLKLWDATSA 775
Query: 325 S-------LLFTLIGHDNW------VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKT 371
+ F L D V+ ++ G ++ +K +W+T ++ +
Sbjct: 776 NERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIF-LWNTDSRSKVAD 834
Query: 372 LEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
H +V + F +T S D+T+++WE +
Sbjct: 835 CRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETK 869
Score = 189 (71.6 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 52/201 (25%), Positives = 90/201 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
+ H V+ F +A+CS D +++W+ TGE H + V F S
Sbjct: 653 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSH 712
Query: 162 --LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
LL + S+D LKLWD++ +C TM GH ++V F P+ + S S D T+K+W+
Sbjct: 713 HLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDA 772
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHT--ARV----------WSLATKETK 267
+ K++ + ++ D ++ C + AR+ W+ ++
Sbjct: 773 TSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMVAAKNKIFLWNTDSRSKV 832
Query: 268 AELRGHDHTVECVAWAPGVAS 288
A+ RGH V V ++P +S
Sbjct: 833 ADCRGHLSWVHGVMFSPDGSS 853
Score = 173 (66.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 43/150 (28%), Positives = 71/150 (47%)
Query: 116 PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW 175
P +A E+ I + + ++ H +V I F K L+S S D +++W
Sbjct: 928 PHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVW 987
Query: 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV 235
+ +C+ ++GH V L NS +LS S D T+K+W + TG K H+ V
Sbjct: 988 NWQLDKCI-FLRGHQETVKDFRLLKNSR-LLSWSFDGTVKVWNIITGNKEKDFVCHQGTV 1045
Query: 236 RQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+S D T +S S D TA++W+++ E
Sbjct: 1046 LSCDISHDATKFSSTSADKTAKIWNVSNGE 1075
Score = 169 (64.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 76/315 (24%), Positives = 136/315 (43%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--GHLDSVQDIAFDQSGK 161
GH + V F P L+ASCS D T++LWD + ++++ +++D D +
Sbjct: 741 GHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQEDM--E 798
Query: 162 LLVSC---SAD-----MSLK----LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
++V C SAD ++ K LW+ + + +GH V GV F P+ L++S
Sbjct: 799 VIVKCCSWSADGARIMVAAKNKIFLWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSS 858
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
D+TI++WE C + ++ V + + +LA DH R+ + + + +
Sbjct: 859 DDQTIRLWETKK-VCKNSAVMLKQEVDVVFQENEVMVLAV---DHIRRLQLINGRTGQID 914
Query: 270 LRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT 329
+ V C +P + Y+A G + I++ ++ + + +
Sbjct: 915 YLT-EAQVSCCCLSPHLQ------------------YIAFGDENGAIEILELVNNRIFQS 955
Query: 330 LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRA-H 388
H V + F K L+S DD ++VW N + K + H T DF +
Sbjct: 956 RFQHKKTVWHIQFTADEKTLISSSDDAEIQVW---NWQLDKCIFLRGHQETVKDFRLLKN 1012
Query: 389 PYVVTGSVDKTVKVW 403
+++ S D TVKVW
Sbjct: 1013 SRLLSWSFDGTVKVW 1027
Score = 151 (58.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 53/191 (27%), Positives = 83/191 (43%)
Query: 189 HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLA 248
H V + F + ++S+S D I++W C+ L GH+E V+ ++ + LL
Sbjct: 959 HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCI-FLRGHQETVKDFRLLKNSRLL- 1016
Query: 249 SCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLA 308
S S D T +VW++ T + + H TV S IS A +
Sbjct: 1017 SWSFDGTVKVWNIITGNKEKDFVCHQGTV---------LSCDISHDATK---------FS 1058
Query: 309 TGSRDKTIKLWDVGSGSLLFTLI-----G---HDNWVRGVTFHPGGKYLVSCGDDKTLRV 360
+ S DKT K+W+V +G LL G H WV + F P GK L+S G ++
Sbjct: 1059 STSADKTAKIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAGG--YIKW 1116
Query: 361 WDTANKRNMKT 371
W+ + +T
Sbjct: 1117 WNVVTGESSQT 1127
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 39/133 (29%), Positives = 62/133 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S + S S D T+++W+ TG E+ H +V S SAD + K+W++S
Sbjct: 1013 SRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVS 1072
Query: 179 TYQCLK-----TMQG---HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG 230
+ L + +G H VT + F P+ ++SA IK W V TG +T
Sbjct: 1073 NGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAGG--YIKWWNVVTGESSQTFYT 1130
Query: 231 HREWVRQIKVSPD 243
+ +++I VSPD
Sbjct: 1131 NGTNLKKIHVSPD 1143
Score = 99 (39.9 bits), Expect = 7.3e-17, Sum P(2) = 7.3e-17
Identities = 30/98 (30%), Positives = 43/98 (43%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L + S D I++W+ +F L GH V+ + L+S D T++VW+
Sbjct: 975 LISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSR-LLSWSFDGTVKVWNIITG 1032
Query: 367 RNMKTLEAHSHFVTSLDF-HRAHPYVVTGSVDKTVKVW 403
K H V S D H A + T S DKT K+W
Sbjct: 1033 NKEKDFVCHQGTVLSCDISHDATKFSST-SADKTAKIW 1069
Score = 44 (20.5 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 132 LWDYETGEYERALHGHLDSVQDIAF-DQSGK 161
LWD ET E E L ++ + + F D++GK
Sbjct: 403 LWDMETEEVEDILQEFVN--KSLLFCDRNGK 431
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 81/267 (30%), Positives = 129/267 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V+++ ++ S++ S S D T+ +WD ETGE + L GH V + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP 165
Query: 162 LLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
LV S D ++KLWD+ ++T Q + + V V F SD ++S D IK+W++
Sbjct: 166 QLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-RGHDHT 276
T+ GH + V + +S +G+ L S + D+T RVW + A KE ++ +G+ H
Sbjct: 225 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHN 284
Query: 277 VE-----CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
E C +W+P + +A GS D+ + +WD S +L+ L
Sbjct: 285 FEKNLLRC-SWSPDGSK------------------IAAGSADRFVYVWDTTSRRVLYKLP 325
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTL 358
GH + V FHP ++S DK L
Sbjct: 326 GHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 162 (62.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 40/102 (39%), Positives = 54/102 (52%)
Query: 307 LATGSRDKTIKLWDV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
LA+ D+ I LW+V G TL GH V + ++ G L S DKT+ VWD+
Sbjct: 82 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 141
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406
+K L+ H+ FV S R P +V TGS D TVK+W+ R
Sbjct: 142 GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 183
Score = 155 (59.6 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+KLWD+ + + T + V VTF+ ++S G D ++VWD
Sbjct: 168 VCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ T+ H+ VT L Y+++ ++D TV+VW+ R
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
Score = 149 (57.5 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 41/141 (29%), Positives = 67/141 (47%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V F +G L S D + LW++ C T++GH V + + +
Sbjct: 63 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTD 121
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWS 260
+ SAS DKT+ +W+ TG VK L GH +V + G L+ + S+D T ++W
Sbjct: 122 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 181
Query: 261 LATKETKAELRGHDHTVECVA 281
+ KA ++ +T + +A
Sbjct: 182 I---RKKAAVQTFQNTYQVLA 199
Score = 147 (56.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 31/101 (30%), Positives = 56/101 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG-DDKTLRVWDTAN 365
L + S DKT+ +WD +G + L GH ++V G LV G DD T+++WD
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K ++T + +++ V ++ F+ +++G +D +KVW+ R
Sbjct: 185 KAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 224
Score = 133 (51.9 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
+ +G D IK+WD+ L +T+ GH + V G++ G YL+S D T+RVWD
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPF 268
Query: 365 --NKRNMKTLEAHSH-FVTSL---DFHRAHPYVVTGSVDKTVKVWE 404
+R +K + + H F +L + + GS D+ V VW+
Sbjct: 269 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWD 314
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERAL---HGHLDSVQD-- 153
+ + GH V + S + S + D T+R+WD ER + G++ + +
Sbjct: 230 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNL 289
Query: 154 --IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
++ G + + SAD + +WD ++ + L + GH ++ VAF P+ +LSAS D
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSD 349
Query: 212 KTIKMWEV 219
K + M E+
Sbjct: 350 KRLYMGEI 357
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-ANKRNMKTLEAHSHFVTSLDFH 385
+ L GH+ V FHP G L S G D+ + +W+ + N TL+ HS V L ++
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 119
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + S DKTV VW+
Sbjct: 120 TDGSMLFSASTDKTVAVWD 138
Score = 67 (28.6 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTV 277
+ L+GH V K P+G+ LAS D +W++ + A L+GH V
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 113
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 303 (111.7 bits), Expect = 5.5e-26, P = 5.5e-26
Identities = 66/184 (35%), Positives = 103/184 (55%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F L GH PV V+ + + + S S D TI++WD +T E + L H +V+ + S
Sbjct: 536 FTLEGHDKPVHTVLLNDKY--LFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI--S 591
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
G+ L S S D ++K+WD+ T++C T++GH VT + L + + S S DKTI++W +
Sbjct: 592 GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTN--LYSGSYDKTIRVWNL 649
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+ C TL GH WV + + LL + S+D+T ++W L T L GH+ TV+C
Sbjct: 650 KSLECSATLRGHDRWVEHMVICDK--LLFTASDDNTIKIWDLETLRCNTTLEGHNATVQC 707
Query: 280 VA-W 282
+A W
Sbjct: 708 LAVW 711
Score = 296 (109.3 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 86/264 (32%), Positives = 129/264 (48%)
Query: 120 LMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM 177
L CS D +IR++DY++ E + L GH V+ I ++ + L S S+D S+K+WD+
Sbjct: 473 LFTGCS-DNSIRVYDYKSQNMECVQTLKGHEGPVESICYND--QYLFSGSSDHSIKVWDL 529
Query: 178 STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ 237
+C+ T++GHD V V L N ++ S S DKTIK+W++ T C TL H V+
Sbjct: 530 KKLRCIFTLEGHDKPVHTV--LLNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKT 587
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH--TVECVAWA---PGVASESIS 292
+ +S G L S SND T +VW L T L+GH T C+ G ++I
Sbjct: 588 LCIS--GQYLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIR 645
Query: 293 -------EAAXXXXXXXX--------XXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
E + L T S D TIK+WD+ + TL GH+ V
Sbjct: 646 VWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATV 705
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVW 361
+ + K ++SC D+++RVW
Sbjct: 706 QCLAVWEDKKCVISCSHDQSIRVW 729
Score = 214 (80.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 52/161 (32%), Positives = 80/161 (49%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K+ L H V + + + S S D TI++WD +T L GH V I
Sbjct: 575 KYTLESHARAVKTLCISGQY--LFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICI-- 630
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
G L S S D ++++W++ + +C T++GHD V + + +AS D TIK+W+
Sbjct: 631 LGTNLYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICDK--LLFTASDDNTIKIWD 688
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+ T C TL GH V+ + V D + SCS+D + RVW
Sbjct: 689 LETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 187 (70.9 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 42/101 (41%), Positives = 59/101 (58%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL +GS D +IK+WD+ +FTL GHD V V + KYL S DKT++VWD
Sbjct: 514 YLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKT 571
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
TLE+H+ V +L + Y+ +GS DKT+KVW+ +
Sbjct: 572 LECKYTLESHARAVKTLCI--SGQYLFSGSNDKTIKVWDLK 610
Score = 178 (67.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 40/101 (39%), Positives = 60/101 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL +GS DKTIK+WD+ + +TL H V+ T G+YL S +DKT++VWD
Sbjct: 554 YLFSGSSDKTIKVWDLKTLECKYTLESHARAVK--TLCISGQYLFSGSNDKTIKVWDLKT 611
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R TL+ H+ +VT++ + Y +GS DKT++VW +
Sbjct: 612 FRCNYTLKGHTKWVTTICILGTNLY--SGSYDKTIRVWNLK 650
Score = 158 (60.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 36/99 (36%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL +GS DKTIK+WD+ + +TL GH WV + G L S DKT+RVW+ +
Sbjct: 594 YLFSGSNDKTIKVWDLKTFRCNYTLKGHTKWVTTICIL--GTNLYSGSYDKTIRVWNLKS 651
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H +V + + T S D T+K+W+
Sbjct: 652 LECSATLRGHDRWVEHMVI--CDKLLFTASDDNTIKIWD 688
Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS DKTI++W++ S TL GHD WV + K L + DD T+++WD
Sbjct: 635 LYSGSYDKTIRVWNLKSLECSATLRGHDRWVEHMVICD--KLLFTASDDNTIKIWDLETL 692
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
R TLE H+ V L V++ S D++++VW
Sbjct: 693 RCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/173 (28%), Positives = 81/173 (46%)
Query: 236 RQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAA 295
RQ+ VS DG L N + R S + K E+ ++ E + E+I
Sbjct: 406 RQLFVSNDGNTL----NTNKERSKSKSIDLEKPEILINNKKKESINLETIKLIETIKGYH 461
Query: 296 XXXXXXXXXXYLATGSRDKTIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCG 353
L TG D +I+++D S ++ + TL GH+ V + ++ +YL S
Sbjct: 462 VTSHLCICDNLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEGPVESICYND--QYLFSGS 519
Query: 354 DDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
D +++VWD R + TLE H V ++ + Y+ +GS DKT+KVW+ +
Sbjct: 520 SDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLN--DKYLFSGSSDKTIKVWDLK 570
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 300 (110.7 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 75/246 (30%), Positives = 115/246 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 301 TLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAH 359
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + + VKT GH V I
Sbjct: 360 TGEAKQQFPFHSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 418
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ + +L+ H+ + + W+P G A+ + +
Sbjct: 419 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNS---- 474
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWD+ G TL H V V F P GKYL S DK
Sbjct: 475 ------NIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKC 528
Query: 358 LRVWDT 363
+ +W+T
Sbjct: 529 VHIWNT 534
Score = 267 (99.0 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 66/187 (35%), Positives = 92/187 (49%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H +P + V + + ASCS D I + + GH + V I +D SG LL
Sbjct: 370 HSAPALDVDWQNN-TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 428
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNV-------TGVAFL-PNSDFVL-SASRDKTIK 215
SCS DM+LK+W M C+ +Q H+ + TG A PNS+ +L SAS D T++
Sbjct: 429 SCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 488
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ G C TLT H+E V + SPDG LAS S D +W+ + RG
Sbjct: 489 LWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRGTGG 548
Query: 276 TVECVAW 282
E V W
Sbjct: 549 IFE-VCW 554
Score = 226 (84.6 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 84/325 (25%), Positives = 130/325 (40%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERAL-H-----GH-LDS 150
L GH S V ++PV L+AS S D+T R+W+ G + L H GH + S
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 287
Query: 151 VQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+D+ ++ +G LL + S D ++W T+ H + + + +++LS
Sbjct: 288 NKDVTSLDWNTNGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNRKGNYILS 346
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
A DKT +W+ TG + H + + T ASCS D V L
Sbjct: 347 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPV 405
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLL 327
+GH + V + W P LA+ S D T+K+W + +
Sbjct: 406 KTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSMKQEVCI 447
Query: 328 FTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
L H+ + + + P G L S D T+R+WD TL H
Sbjct: 448 HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEP 507
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVW 403
V S+ F Y+ +GS DK V +W
Sbjct: 508 VYSVAFSPDGKYLASGSFDKCVHIW 532
Score = 218 (81.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 61/234 (26%), Positives = 107/234 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + Q+
Sbjct: 325 LGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNT 383
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P+ + S S D T+K+W +
Sbjct: 384 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 443
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
C+ L H + + IK SP G + SN ++ + + A+ D TV
Sbjct: 444 EVCIHDLQAHNKEIYTIKWSPTGP---ATSNPNSNIMLASAS---------FDSTVRLWD 491
Query: 282 WAPGVASESIS---EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
GV + +++ E YLA+GS DK + +W+ SG+L+ + G
Sbjct: 492 IERGVCTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSYRG 545
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 63/276 (22%), Positives = 107/276 (38%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G + +
Sbjct: 228 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN-----ENSNGGSTQLVLRHCIREGG 282
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
+ +++D T W G + T G + +I DG L AS H +++L
Sbjct: 283 HDVPSNKDVTSLDWNT-NGTLLAT--GSYDGFARIWTE-DGNL-ASTLGQHKGPIFALKW 337
Query: 263 -TKETKAELRGHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K G D T + W G A + A A+ S D I
Sbjct: 338 NRKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIH 395
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + + L+AH+
Sbjct: 396 VCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNK 455
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 456 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD 491
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 295 (108.9 bits), Expect = 6.3e-26, P = 6.3e-26
Identities = 89/327 (27%), Positives = 148/327 (45%)
Query: 82 PTRAKRSPTEWIPRAPEKF--ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE 139
P+ ++ P EW AP K +SGH V + P AS + D TI++W+ TG
Sbjct: 119 PSATRQQPPEW--HAPWKLMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGA 176
Query: 140 YERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFL 199
L GH+ +V+ +A L SC D +K WD+ T + ++ GH V +A
Sbjct: 177 LRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALH 236
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
P D +++ RD ++W++ T + L+GH V ++ + + S D T R+W
Sbjct: 237 PRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLW 296
Query: 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW 319
LA +T L H + +A P + + A+ + G + ++ +
Sbjct: 297 DLAAGKTMGVLTHHKKGIRSLATHP--REFTFASASTGSIKQ----WKCPGG--EFMQNF 348
Query: 320 DVGSGSLLFTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK-TLEAHSH 377
+ G +++ TL + DN V F G +S D KT + T + +LEA +
Sbjct: 349 E-GHNAIINTLSVNEDN----VLFSGGDNGSMSFWDWKTGYRYQTIDTTAQPGSLEAEAG 403
Query: 378 FVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+TS F R ++TG DKT+KVW+
Sbjct: 404 IMTST-FDRTGLRLITGEADKTIKVWK 429
Score = 244 (91.0 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 71/273 (26%), Positives = 117/273 (42%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
+ L+GH S V + P + SC ED ++ WD ET + R HGHL V +A
Sbjct: 178 RLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHP 237
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
LLV+ D ++WDM T + + GH V V V++ S D T+++W+
Sbjct: 238 RLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQCQEADPQVITGSLDATVRLWD 297
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVE 278
+A G + LT H++ +R + P AS S + + W E GH+ +
Sbjct: 298 LAAGKTMGVLTHHKKGIRSLATHPREFTFASASTG-SIKQWKCPGGEFMQNFEGHNAIIN 356
Query: 279 CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR 338
++ V +++ + + TG R +TI GSL + +
Sbjct: 357 TLS----VNEDNVLFSGGDNGSMSFWDW-KTGYRYQTIDT-TAQPGSL-----EAEAGIM 405
Query: 339 GVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKT 371
TF G L++ DKT++VW ++ +T
Sbjct: 406 TSTFDRTGLRLITGEADKTIKVWKQDDQATPET 438
Score = 197 (74.4 bits), Expect = 6.3e-13, P = 6.3e-13
Identities = 37/101 (36%), Positives = 58/101 (57%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ A+G+ D+TIK+W++ +G+L TL GH + VRG+ P YL SCG+DK ++ WD
Sbjct: 157 WFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSCGEDKMVKCWDLET 216
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++ H V +L H +VTG D +VW+ R
Sbjct: 217 NKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMR 257
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 303 (111.7 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 64/182 (35%), Positives = 91/182 (50%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E L GH PV F P + + SCSED T+RLW +T GH V D
Sbjct: 513 ASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 572
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
F G VS D +LW YQ L+ GH +VT F PNS+++ + S D+T++
Sbjct: 573 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVR 632
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G CV+ TGH+ + + SP+G LA+ + D +W + EL+GH
Sbjct: 633 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 692
Query: 276 TV 277
T+
Sbjct: 693 TI 694
Score = 238 (88.8 bits), Expect = 3.7e-17, P = 3.7e-17
Identities = 56/175 (32%), Positives = 84/175 (48%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V F +
Sbjct: 563 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVTCTRFHPNSN 620
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + SAD +++LWD+ C++ GH + +AF PN F+ + + D + +W++
Sbjct: 621 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGH 680
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
G V L GH + + ++ S DG +LAS S D+T R+W A K + +L D T
Sbjct: 681 GLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD-AVKAFE-DLETDDFT 733
Score = 207 (77.9 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 44/166 (26%), Positives = 77/166 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+ S+D R+ D +T + L+GH V +F L+SCS D +++LW +
Sbjct: 494 SLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQ 553
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T+ CL +GH++ V F P + +S D+ ++W ++ GH V
Sbjct: 554 TFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCT 613
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+ P+ +A+ S D T R+W + GH + +A++P
Sbjct: 614 RFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP 659
Score = 184 (69.8 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK-----AEL-- 270
E C T + + + ++ D +++ D T RVWS+ K+ + A+L
Sbjct: 436 ECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRVWSVTPKKLRSVKAAADLSL 495
Query: 271 --RGHDHTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG 324
+ D +E + + I S YL + S D T++LW + +
Sbjct: 496 IDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTF 555
Query: 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384
+ L GH+ V F P G Y VS G D+ R+W T + + ++ H VT F
Sbjct: 556 TCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRF 615
Query: 385 HRAHPYVVTGSVDKTVKVWE 404
H Y+ TGS D+TV++W+
Sbjct: 616 HPNSNYIATGSADRTVRLWD 635
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/99 (32%), Positives = 58/99 (58%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWDV +G+ + GH + + F P G++L + D + +WD +
Sbjct: 621 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGH 680
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ + +L F R + +GS+D TV++W+
Sbjct: 681 GLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWD 719
Score = 181 (68.8 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V FHP + +A+ S D T+RLWD G R GH + +AF +G+
Sbjct: 604 AGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRF 663
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + + D + LWD+ + ++GH + + F + + + S S D T+++W+
Sbjct: 664 LATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAVKA 723
Query: 223 Y 223
+
Sbjct: 724 F 724
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +G D+ +LW L GH V FHP Y+ + D+T+R+WD N
Sbjct: 579 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLN 638
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + SL F ++ TG+ D V +W+
Sbjct: 639 GNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWD 677
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 298 (110.0 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 72/245 (29%), Positives = 113/245 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W + G L H + + +++ G ++S D + +WD
Sbjct: 238 TLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + ++ +KT GH V I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ +L+ H+ + + W+P + A
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA---- 411
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S D T++LWDV G + TL H V V F P G+YL S DK +
Sbjct: 412 -----NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 359 RVWDT 363
+W+T
Sbjct: 467 HIWNT 471
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 72/270 (26%), Positives = 119/270 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + QS
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNN 320
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P + + S S D T+K+W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQ 380
Query: 222 GYCVKTLTGHREWVRQIKVSPDGT---------LLASCSNDHTARVWSLATKETKAELRG 272
CV L H + + IK SP G +LAS S D T R+W + L
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
H V VA++P YLA+GS DK + +W+ +G+L+ + G
Sbjct: 441 HQEPVYSVAFSPD------------------GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V ++ G + + D ++ V D
Sbjct: 483 TGG-IFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 233 (87.1 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 87/331 (26%), Positives = 133/331 (40%)
Query: 97 PEK-FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERAL-H----G 146
P K L GH S V ++PV L+AS S D+T R+W+ +G + L H G
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREG 218
Query: 147 HLD--SVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
D S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKK 277
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+F+LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 278 GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKL 336
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDP------------------TGNLLASCSDDMTLKIWSM 378
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H+ + + + P G L S D T+R+WD + TL
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 68/276 (24%), Positives = 108/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W++S + G V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSE----NSTSGSTQLVLRHCIREGGQ 220
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
V S ++D T W + G + T G + +I DG L AS H +++L
Sbjct: 221 DVPS-NKDVTSLDWN-SEGTLLAT--GSYDGFARIWTK-DGNL-ASTLGQHKGPIFALKW 274
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 275 NKKGNFILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AH+
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 298 (110.0 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 72/245 (29%), Positives = 113/245 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W + G L H + + +++ G ++S D + +WD
Sbjct: 238 TLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + ++ +KT GH V I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ +L+ H+ + + W+P + A
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA---- 411
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S D T++LWDV G + TL H V V F P G+YL S DK +
Sbjct: 412 -----NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 359 RVWDT 363
+W+T
Sbjct: 467 HIWNT 471
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 72/270 (26%), Positives = 119/270 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + QS
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNN 320
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P + + S S D T+K+W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQ 380
Query: 222 GYCVKTLTGHREWVRQIKVSPDGT---------LLASCSNDHTARVWSLATKETKAELRG 272
CV L H + + IK SP G +LAS S D T R+W + L
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
H V VA++P YLA+GS DK + +W+ +G+L+ + G
Sbjct: 441 HQEPVYSVAFSPD------------------GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V ++ G + + D ++ V D
Sbjct: 483 TGG-IFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 233 (87.1 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 87/331 (26%), Positives = 133/331 (40%)
Query: 97 PEK-FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERAL-H----G 146
P K L GH S V ++PV L+AS S D+T R+W+ +G + L H G
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREG 218
Query: 147 HLD--SVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
D S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKK 277
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+F+LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 278 GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKL 336
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDP------------------TGNLLASCSDDMTLKIWSM 378
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H+ + + + P G L S D T+R+WD + TL
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 147 (56.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 68/276 (24%), Positives = 108/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W++S + G V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSE----NSTSGSTQLVLRHCIREGGQ 220
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
V S ++D T W + G + T G + +I DG L AS H +++L
Sbjct: 221 DVPS-NKDVTSLDWN-SEGTLLAT--GSYDGFARIWTK-DGNL-ASTLGQHKGPIFALKW 274
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 275 NKKGNFILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AH+
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 298 (110.0 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 72/245 (29%), Positives = 113/245 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W + G L H + + +++ G ++S D + +WD
Sbjct: 238 TLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + ++ +KT GH V I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ +L+ H+ + + W+P + A
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA---- 411
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S D T++LWDV G + TL H V V F P G+YL S DK +
Sbjct: 412 -----NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 359 RVWDT 363
+W+T
Sbjct: 467 HIWNT 471
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 72/270 (26%), Positives = 119/270 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + QS
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNN 320
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P + + S S D T+K+W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQ 380
Query: 222 GYCVKTLTGHREWVRQIKVSPDGT---------LLASCSNDHTARVWSLATKETKAELRG 272
CV L H + + IK SP G +LAS S D T R+W + L
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
H V VA++P YLA+GS DK + +W+ +G+L+ + G
Sbjct: 441 HQEPVYSVAFSPD------------------GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V ++ G + + D ++ V D
Sbjct: 483 TGG-IFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 232 (86.7 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 87/331 (26%), Positives = 133/331 (40%)
Query: 97 PEK-FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERAL-H----G 146
P K L GH S V ++PV L+AS S D+T R+W+ +G + L H G
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREG 218
Query: 147 HLD--SVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
D S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKK 277
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+F+LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 278 GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKL 336
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDP------------------TGNLLASCSDDMTLKIWSM 378
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H+ + + + P G L S D T+R+WD + TL
Sbjct: 379 KQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTL 438
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 439 TKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 68/276 (24%), Positives = 108/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W++S + G V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSE----NSTSGPTQLVLRHCIREGGQ 220
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
V S ++D T W + G + T G + +I DG L AS H +++L
Sbjct: 221 DVPS-NKDVTSLDWN-SEGTLLAT--GSYDGFARIWTK-DGNL-ASTLGQHKGPIFALKW 274
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 275 NKKGNFILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AH+
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 298 (110.0 bits), Expect = 6.4e-26, P = 6.4e-26
Identities = 72/245 (29%), Positives = 113/245 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W + G L H + + +++ G ++S D + +WD
Sbjct: 238 TLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + ++ +KT GH V I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ +L+ H+ + + W+P + A
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA---- 411
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S D T++LWDV G + TL H V V F P G+YL S DK +
Sbjct: 412 -----NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 466
Query: 359 RVWDT 363
+W+T
Sbjct: 467 HIWNT 471
Score = 242 (90.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 72/270 (26%), Positives = 119/270 (44%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + QS
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNN 320
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P + + S S D T+K+W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQ 380
Query: 222 GYCVKTLTGHREWVRQIKVSPDGT---------LLASCSNDHTARVWSLATKETKAELRG 272
CV L H + + IK SP G +LAS S D T R+W + L
Sbjct: 381 DNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTK 440
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
H V VA++P YLA+GS DK + +W+ +G+L+ + G
Sbjct: 441 HQEPVYSVAFSPD------------------GRYLASGSFDKCVHIWNTQTGALVHSYRG 482
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V ++ G + + D ++ V D
Sbjct: 483 TGG-IFEVCWNAAGDKVGASASDGSVCVLD 511
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 85/325 (26%), Positives = 131/325 (40%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERAL-H----GHLD--S 150
L GH S V ++PV L+AS S D+T R+W+ +G + L H G D S
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 151 VQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+D+ ++ G LL + S D ++W T+ H + + + +F+LS
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
A DKT +W+ TG + H + + T ASCS D V L
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKLGQDRPI 342
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLL 327
+GH + V + W P LA+ S D T+K+W + + +
Sbjct: 343 KTFQGHTNEVNAIKWDP------------------TGNLLASCSDDMTLKIWSMKQDNCV 384
Query: 328 FTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
L H+ + + + P G L S D T+R+WD + TL H
Sbjct: 385 HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEP 444
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVW 403
V S+ F Y+ +GS DK V +W
Sbjct: 445 VYSVAFSPDGRYLASGSFDKCVHIW 469
Score = 146 (56.5 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 68/276 (24%), Positives = 108/276 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W++S + G V
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSE----NSTSGPTQLVLRHCIREGGQ 220
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
V S ++D T W + G + T G + +I DG L AS H +++L
Sbjct: 221 DVPS-NKDVTSLDWN-SEGTLLAT--GSYDGFARIWTK-DGNL-ASTLGQHKGPIFALKW 274
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K+ L G D T + W G A + A A+ S D I
Sbjct: 275 NKKGNFILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIH 332
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + L+AH+
Sbjct: 333 VCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNK 392
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 393 EIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 306 (112.8 bits), Expect = 6.5e-26, P = 6.5e-26
Identities = 79/294 (26%), Positives = 129/294 (43%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
+ FHP + +TI+LWDY G H V+ + F + + VS D +
Sbjct: 17 IAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYT 76
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+K+W + T +CL T+ GH V V F +++SAS D+TI++W + LTGH
Sbjct: 77 IKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGH 136
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESI 291
+V + P L+ S S D T R+W ++ + G E ++ + S+
Sbjct: 137 NHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSL 196
Query: 292 SEAAXXXXXXXXXX------------YLATGSRDKTIKLWDVGSGSL--LFTLIGHDNWV 337
+ + +GS D+ +KLW + + + T GH N V
Sbjct: 197 GDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNV 256
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
V FHP ++S G+DKTLRVWD + +K + + + AHP++
Sbjct: 257 DSVIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLI---AAHPHI 307
Score = 286 (105.7 bits), Expect = 8.9e-24, P = 8.9e-24
Identities = 77/265 (29%), Positives = 126/265 (47%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
IAF S ++ +++LWD L + H+ V G+ F P +SA D T
Sbjct: 17 IAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDYT 76
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
IK+W + T C+ TLTGH ++VR + + + S S+D T R+W+ ++ A L GH
Sbjct: 77 IKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGH 136
Query: 274 DHTVECVAWAPG---VASESISEAAXX-XXXXXXXXYLATGS---RDKTIKLWDVGSGSL 326
+H V C + P + S S+ E + A G+ ++ ++ GSL
Sbjct: 137 NHFVMCAQFHPTDDLIVSASLDETIRIWDISGLRKRHSAPGTSSFEEQMSAQQNLLDGSL 196
Query: 327 -----LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD-TANKR-NMKTLEAHSHFV 379
F L GH V +FHP +VS DD+ +++W +A K + T H++ V
Sbjct: 197 GDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNV 256
Query: 380 TSLDFHRAHPYVVTGSVDKTVKVWE 404
S+ FH +++ DKT++VW+
Sbjct: 257 DSVIFHPHQNLIISVGEDKTLRVWD 281
Score = 208 (78.3 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 37/116 (31%), Positives = 66/116 (56%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H PV + FHP + S +D TI++W +T + L GHLD V+ + F + ++
Sbjct: 52 HEGPVRGLDFHPTQPIFVSAGDDYTIKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWII 111
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
S S D ++++W+ + + + GH+H V F P D ++SAS D+TI++W+++
Sbjct: 112 SASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWDIS 167
Score = 175 (66.7 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 54/189 (28%), Positives = 89/189 (47%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ L+GH V V FH + S S+D TIR+W+++ + L GH V F +
Sbjct: 89 YTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQNRKEIACLTGHNHFVMCAQFHPT 148
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
L+VS S D ++++WD+S + K H+ G + +SA ++ + +
Sbjct: 149 DDLIVSASLDETIRIWDISGLR--KR-----HSAPGTSSFEEQ---MSAQQN----LLDG 194
Query: 220 ATGYCVKT--LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAEL-RGHDH 275
+ G CV L GH V P L+ S S+D ++W + ATK + + RGH +
Sbjct: 195 SLGDCVVKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTN 254
Query: 276 TVECVAWAP 284
V+ V + P
Sbjct: 255 NVDSVIFHP 263
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/123 (26%), Positives = 59/123 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE-TGEYE-RALHGHLDSVQDIAF 156
KF L GH V FHP L+ S S+D ++LW T +E GH ++V + F
Sbjct: 202 KFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIF 261
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
L++S D +L++WD+ +K + + +A P+ + + A+ D I +
Sbjct: 262 HPHQNLIISVGEDKTLRVWDLDKRTPVKQFKRENDRFWLIAAHPHIN-LFGAAHDSGIMV 320
Query: 217 WEV 219
+++
Sbjct: 321 FKL 323
Score = 120 (47.3 bits), Expect = 0.00098, P = 0.00098
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254
G+AF P+ +VL A TI++W+ G + H VR + P + S +D+
Sbjct: 16 GIAFHPSRPWVLVALFSSTIQLWDYRMGTLLHRFEDHEGPVRGLDFHPTQPIFVSAGDDY 75
Query: 255 TARVWSLATKETKAELRGH 273
T +VWSL T + L GH
Sbjct: 76 TIKVWSLDTNKCLYTLTGH 94
>POMBASE|SPBPJ4664.04 [details] [associations]
symbol:SPBPJ4664.04 "coatomer alpha subunit
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISO]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=ISO] [GO:0030126 "COPI vesicle coat" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBPJ4664.04 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006888 GO:GO:0030126 GO:GO:0006890 HSSP:P63005
HOGENOM:HOG000195913 KO:K05236 OMA:PLAADHI InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:NP_595279.1 ProteinModelPortal:Q96WV5
STRING:Q96WV5 EnsemblFungi:SPBPJ4664.04.1 GeneID:2541412
KEGG:spo:SPBPJ4664.04 OrthoDB:EOG40VZXP NextBio:20802518
Uniprot:Q96WV5
Length = 1207
Score = 235 (87.8 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 52/181 (28%), Positives = 91/181 (50%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV + FHP L S +D + +W+Y++ + +L GH+D V+ F +
Sbjct: 51 GHDGPVRGIAFHPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWI 110
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+SCS D ++++W+ + C+ + GH H V AF P+ D ++SAS D+T+++W+++ G
Sbjct: 111 LSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWDIS-GL 169
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+K + +S + L A N + ++ K L GHD V A+
Sbjct: 170 RMKNAA-------PVSMSLEDQL-AQAHNSISNDLFGSTDAIVKFVLEGHDRGVNWCAFH 221
Query: 284 P 284
P
Sbjct: 222 P 222
Score = 226 (84.6 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 61/252 (24%), Positives = 103/252 (40%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+AF + +++ + ++LWD L GHD V G+AF P +S D
Sbjct: 17 VAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYK 76
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
+ +W + + +L GH ++VR + + SCS+D T R+W+ ++ A L GH
Sbjct: 77 VNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGH 136
Query: 274 DHTVECVAWAPG---VASESISEAA------------XXXXXXXXXXYLATGSRDKTIKL 318
H V C A+ P + S S+ + LA + L
Sbjct: 137 SHYVMCAAFHPSEDLIVSASLDQTVRVWDISGLRMKNAAPVSMSLEDQLAQAHNSISNDL 196
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
+ + F L GHD V FHP ++S GDD+ +++W + + HF
Sbjct: 197 FGSTDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHF 256
Query: 379 VTSLDFHRAHPY 390
++ HP+
Sbjct: 257 -NNVSCCLFHPH 267
Score = 213 (80.0 bits), Expect = 3.0e-23, Sum P(2) = 3.0e-23
Identities = 48/151 (31%), Positives = 72/151 (47%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V FHP + + + I+LWDY G GH V+ IAF + L VS D
Sbjct: 17 VAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPLFVSGGDDYK 76
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+ +W+ + + L ++ GH V F ++LS S D+TI++W + C+ LTGH
Sbjct: 77 VNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGH 136
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+V P L+ S S D T RVW ++
Sbjct: 137 SHYVMCAAFHPSEDLIVSASLDQTVRVWDIS 167
Score = 209 (78.6 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 36/96 (37%), Positives = 61/96 (63%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368
+G D + +W+ S LLF+L GH ++VR TFH +++SC DD+T+R+W+ ++
Sbjct: 70 SGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNC 129
Query: 369 MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L HSH+V FH + +V+ S+D+TV+VW+
Sbjct: 130 IAILTGHSHYVMCAAFHPSEDLIVSASLDQTVRVWD 165
Score = 188 (71.2 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 289 ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY 348
ES S A ++ T + I+LWD G+LL GHD VRG+ FHP
Sbjct: 8 ESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAFHPTQPL 67
Query: 349 LVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
VS GDD + VW+ +++ + +L H +V FH +P++++ S D+T+++W
Sbjct: 68 FVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIW 122
Score = 179 (68.1 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 55/188 (29%), Positives = 89/188 (47%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F+L GH V FH + + SCS+D TIR+W++++ L GH V AF S
Sbjct: 89 FSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAFHPS 148
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
L+VS S D ++++WD+S + +K N V+ + D + A + ++
Sbjct: 149 EDLIVSASLDQTVRVWDISGLR-MK-------NAAPVS-MSLEDQLAQAHNSISNDLFG- 198
Query: 220 ATGYCVK-TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAEL-RGHDHT 276
+T VK L GH V P L+ S +D ++W + A+K + + RGH +
Sbjct: 199 STDAIVKFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNN 258
Query: 277 VECVAWAP 284
V C + P
Sbjct: 259 VSCCLFHP 266
Score = 144 (55.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V AF + L++S D +KLW M+ + + T +GH +NV+ F P+
Sbjct: 208 LEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPH 267
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+ +LSAS DKTI++W++ V+T + I V P L A+ ++D V+ L
Sbjct: 268 QELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLNLFAA-AHDSGVMVFKL 326
Score = 134 (52.2 bits), Expect = 6.6e-26, Sum P(2) = 6.6e-26
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 328 FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD-TANKR-NMKTLEAHSHFVTSLDFH 385
F L GHD V FHP ++S GDD+ +++W TA+K + T H + V+ FH
Sbjct: 206 FVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFH 265
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+++ S DKT++VW+
Sbjct: 266 PHQELILSASEDKTIRVWD 284
Score = 127 (49.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/123 (23%), Positives = 60/123 (48%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE-YE-RALHGHLDSVQDIAF 156
KF L GH V FHP L+ S +D ++LW + +E GH ++V F
Sbjct: 205 KFVLEGHDRGVNWCAFHPTLPLILSAGDDRLVKLWRMTASKAWEVDTCRGHFNNVSCCLF 264
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+L++S S D ++++WD++ ++T + + + P + + +A+ D + +
Sbjct: 265 HPHQELILSASEDKTIRVWDLNRRTAVQTFRRDNDRFWFITVHPKLN-LFAAAHDSGVMV 323
Query: 217 WEV 219
+++
Sbjct: 324 FKL 326
Score = 111 (44.1 bits), Expect = 6.7e-12, Sum P(2) = 6.7e-12
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+ L + GVAF P ++L++ + I++W+ G + GH VR I
Sbjct: 2 EMLTKFESRSSRAKGVAFHPTQPWILTSLHNGRIQLWDYRMGTLLDRFDGHDGPVRGIAF 61
Query: 241 SPDGTLLASCSNDHTARVWSLATKETKAELRGH-DHTVEC 279
P L S +D+ VW+ +++ L GH D+ C
Sbjct: 62 HPTQPLFVSGGDDYKVNVWNYKSRKLLFSLCGHMDYVRVC 101
Score = 101 (40.6 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 307 LATGSRDKTIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
L+ G D+ +KLW + + + T GH N V FHP + ++S +DKT+RVWD
Sbjct: 228 LSAGD-DRLVKLWRMTASKAWEVDTCRGHFNNVSCCLFHPHQELILSASEDKTIRVWDL- 285
Query: 365 NKR 367
N+R
Sbjct: 286 NRR 288
Score = 59 (25.8 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 29/107 (27%), Positives = 43/107 (40%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDN---WVRGVTFHPGGKYLVSCGDDKTLRVWDT 363
+ + S DKTI++WD+ + + T DN W +T HP L + D + V+
Sbjct: 271 ILSASEDKTIRVWDLNRRTAVQTF-RRDNDRFWF--ITVHPKLN-LFAAAHDSGVMVFKL 326
Query: 364 ANKR-----NMKTL--EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+R N+ TL + S D RA V SV W
Sbjct: 327 ERERPAHALNINTLLYVNKEKSIVSYDLLRAQSTTVA-SVKHLGSAW 372
Score = 42 (19.8 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 307 LATGSRDKTI-KLWDVGSGSLLFTLIGHDNWVRG----VTFHPGGKYLVSCGDDKTLRVW 361
L T S D + +L +V S S L DN ++G F ++ V D+T+ +
Sbjct: 388 LLTSSADNGVYELVNVSSRSNSLPL--KDN-IKGPGDDAIFVARNRFAVFSRSDQTIEIK 444
Query: 362 DTANKRNMKTLE 373
D +NK KT++
Sbjct: 445 DLSNKVT-KTIQ 455
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 285 (105.4 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 72/253 (28%), Positives = 119/253 (47%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P +A+ +ED IR+WD T + GH + + F +G+ + S S D +
Sbjct: 322 VCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKT 381
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT-- 229
++LWD++ + + T+ D VT VA P+ +V + S DKT+++W+ TGY V+ L
Sbjct: 382 VRLWDIAEGKLVYTLSIED-GVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENP 440
Query: 230 -GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288
GH++ V + +P+G L S S D T ++W L + G +C G
Sbjct: 441 DGHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGG--KCHRTFEGHKD 498
Query: 289 ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY 348
+S ++ +GS+D+ ++ WD +G+ L GH N V V P G
Sbjct: 499 FVLSVCLTPDGH-----WVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNL 553
Query: 349 LVSCGDDKTLRVW 361
+ D R+W
Sbjct: 554 FATGSGDMRARIW 566
Score = 283 (104.7 bits), Expect = 6.9e-26, Sum P(2) = 6.9e-26
Identities = 77/267 (28%), Positives = 122/267 (45%)
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
++ + F GK L + + D +++WD++T GH+ ++ + F N ++ S S
Sbjct: 319 IRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSG 378
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
DKT+++W++A G V TL+ + V + +SPDG +A+ S D T RVW T L
Sbjct: 379 DKTVRLWDIAEGKLVYTLS-IEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERL 437
Query: 271 R---GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV------ 321
GH +V VA+AP E +S GS DKTIKLW++
Sbjct: 438 ENPDGHKDSVYSVAFAPN-GKELVS-----------------GSLDKTIKLWELNLPRQQ 479
Query: 322 ----GSGSLLF-TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS 376
G G T GH ++V V P G +++S D+ ++ WD L+ H
Sbjct: 480 YNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHK 539
Query: 377 HFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V S+ TGS D ++W
Sbjct: 540 NSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 250 (93.1 bits), Expect = 7.5e-19, P = 7.5e-19
Identities = 65/200 (32%), Positives = 99/200 (49%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K SGH + + F +AS S D T+RLWD G+ L D V +A
Sbjct: 351 KHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIE-DGVTTVAMSP 409
Query: 159 SGKLLVSCSADMSLKLWDMST-Y--QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G + + S D ++++WD +T Y + L+ GH +V VAF PN ++S S DKTIK
Sbjct: 410 DGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVSGSLDKTIK 469
Query: 216 MWEVAT-----------GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
+WE+ G C +T GH+++V + ++PDG + S S D + W T
Sbjct: 470 LWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITG 529
Query: 265 ETKAELRGHDHTVECVAWAP 284
+ L+GH ++V VA +P
Sbjct: 530 NAQMMLQGHKNSVISVAPSP 549
Score = 243 (90.6 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 59/165 (35%), Positives = 85/165 (51%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH---GHLDSVQDIAFDQSGKLLVS 165
V V P +A+ S D T+R+WD TG L GH DSV +AF +GK LVS
Sbjct: 402 VTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGKELVS 461
Query: 166 CSADMSLKLWDMST----Y-------QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
S D ++KLW+++ Y +C +T +GH V V P+ +V+S S+D+ +
Sbjct: 462 GSLDKTIKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGV 521
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+ W+ TG L GH+ V + SP G L A+ S D AR+W
Sbjct: 522 QFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
Score = 200 (75.5 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 74/278 (26%), Positives = 126/278 (45%)
Query: 147 HL--DSVQD-IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG------VA 197
HL DSV + F + GK L + + S +++D++ Q + +Q + +G V
Sbjct: 265 HLVHDSVVCCVRFSRDGKYLAT-GCNRSAQIFDVTLGQNVAVLQDESVDKSGDLYIRSVC 323
Query: 198 FLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257
F P+ ++ + + DK I++W++AT +GH + + + + +G +AS S D T R
Sbjct: 324 FSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVR 383
Query: 258 VWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
+W +A + L D V VA +P + + AA TG + ++
Sbjct: 384 LWDIAEGKLVYTLSIEDG-VTTVAMSP----DGLYVAAGSLDKTVRVWDTTTGYLVERLE 438
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD---------TANKRN 368
D GH + V V F P GK LVS DKT+++W+ +A K
Sbjct: 439 NPD-----------GHKDSVYSVAFAPNGKELVSGSLDKTIKLWELNLPRQQYNSAGKGG 487
Query: 369 M--KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+T E H FV S+ +V++GS D+ V+ W+
Sbjct: 488 KCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWD 525
Score = 119 (46.9 bits), Expect = 0.00050, P = 0.00050
Identities = 26/77 (33%), Positives = 39/77 (50%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH+ V+ V P + S S+D ++ WD TG + L GH +SV +A +G L
Sbjct: 495 GHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLF 554
Query: 164 VSCSADMSLKLWDMSTY 180
+ S DM ++W S Y
Sbjct: 555 ATGSGDMRARIWRYSAY 571
Score = 39 (18.8 bits), Expect = 6.9e-26, Sum P(2) = 6.9e-26
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 137 TGEYERALHGHLDSVQDI 154
TGE+E L G L ++ I
Sbjct: 60 TGEFEHQLTGQLQEMEMI 77
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 298 (110.0 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 74/246 (30%), Positives = 112/246 (45%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 248 TLLAMGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAH 306
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S D I + + VKT GH V I
Sbjct: 307 TGEAKQQFPFHSAPALDVDWQNNTTFA-SCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAI 365
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ +L+ H + + W+P G A+ + + +
Sbjct: 366 KWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIM- 424
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWDV G TL H V + F P GKYL S DK
Sbjct: 425 ---------LASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKC 475
Query: 358 LRVWDT 363
+ +W+T
Sbjct: 476 VHIWNT 481
Score = 221 (82.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 65/244 (26%), Positives = 110/244 (45%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
W L H+ P+ + ++ + + S D T +WD TGE ++ H
Sbjct: 262 WTENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA 321
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
D+ + Q+ SC DM + + + +KT QGH + V + + P+ + S S D
Sbjct: 322 LDVDW-QNNTTFASCGTDMCIHVCRLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 380
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR 271
T+K+W + CV L H + + IK SP G + SN +++ + LA+ + +R
Sbjct: 381 MTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGP---ATSNPNSSIM--LASASFDSTVR 435
Query: 272 GHDHTVECVAWAPGVASESIS---EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLF 328
D VE GV + +++ E YLA+GS DK + +W+ SGSL+
Sbjct: 436 LWD--VE-----QGVCTHTLTKHQEPVYSIAFSPDGKYLASGSFDKCVHIWNTQSGSLVH 488
Query: 329 TLIG 332
+ G
Sbjct: 489 SYQG 492
Score = 217 (81.4 bits), Expect = 4.6e-15, P = 4.6e-15
Identities = 85/331 (25%), Positives = 129/331 (38%)
Query: 97 PEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERAL-H----G 146
P K L GH S V ++PV L+AS S D+T R+W+ G + L H G
Sbjct: 169 PNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREG 228
Query: 147 HLD--SVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
D S +D+ ++ G LL S D ++W + T+ H + + +
Sbjct: 229 WHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENG-NLASTLGQHKGPIFALKWNKK 287
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+++LSA DKT +W+ TG + H + + T ASC D V L
Sbjct: 288 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCGTDMCIHVCRL 346
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 347 GCDLPVKTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSM 388
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H + + + P G L S D T+R+WD TL
Sbjct: 389 KQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTL 448
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 449 TKHQEPVYSIAFSPDGKYLASGSFDKCVHIW 479
Score = 129 (50.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 62/277 (22%), Positives = 109/277 (39%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G + +
Sbjct: 175 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN-----ENSNGGSTQLVLRHCIREGW 229
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
+ +++D T W + G TL + ++ + LAS H +++L
Sbjct: 230 HDVPSNKDVTSLDWN-SDG----TLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKW 284
Query: 263 TKETKAELR-GHDHTVECVAWAP--GVASESI---SEAAXXXXXXXXXXYLATGSRDKTI 316
K+ L G D T + W G A + S A + + G+ D I
Sbjct: 285 NKKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCGT-DMCI 341
Query: 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS 376
+ +G + T GH N V + + P G L SC DD TL++W + L+AHS
Sbjct: 342 HVCRLGCDLPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHS 401
Query: 377 HFVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 402 KEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWD 438
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 35/109 (32%), Positives = 53/109 (48%)
Query: 107 SPVIKVIFHPVFSLM-ASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVS 165
SP +P S+M AS S D+T+RLWD E G L H + V IAF GK L S
Sbjct: 410 SPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLTKHQEPVYSIAFSPDGKYLAS 469
Query: 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
S D + +W+ + + + QG + V + D V +++ D ++
Sbjct: 470 GSFDKCVHIWNTQSGSLVHSYQGTG-GIFEVCWNARGDKVGASASDGSV 517
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 94/321 (29%), Positives = 140/321 (43%)
Query: 102 LSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ H L SC D TI +W ET G +RAL GH V D+
Sbjct: 11 LKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S S D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ H EWV ++ SP+ + ++ SC D VW+LA + K
Sbjct: 131 LWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKTL-EAHSHFVTSLD 383
G D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 GGDI-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D V+VW+
Sbjct: 291 WSADGQTLFAGYTDNLVRVWQ 311
Score = 241 (89.9 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 63/192 (32%), Positives = 92/192 (47%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ AL GH V V+ S S D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q H+ V+ V F PNS ++S DK
Sbjct: 114 SSDNRQIVSGSRDKTIKLWN-TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+ +W +A GH ++ + VSPDG+L AS D A +W L + L G
Sbjct: 173 LVNVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 232
Query: 273 HDHTVECVAWAP 284
D + + ++P
Sbjct: 233 GD-IINALCFSP 243
Score = 197 (74.4 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 57/187 (30%), Positives = 89/187 (47%)
Query: 227 TLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWSLATKET-----KAELRGHDHTVECV 280
TL GH WV Q+ + L SC D T +W L ET + LRGH H V V
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 281 AWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGV 340
++S+ + +GS D T++LWD+ +G+ +GH V V
Sbjct: 70 V----ISSDG--------------QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSV 111
Query: 341 TFHPGGKYLVSCGDDKTLRVWDTAN--KRNMKTLEAHSHFVTSLDF--HRAHPYVVTGSV 396
F + +VS DKT+++W+T K ++ E+HS +V+ + F + ++P +V+
Sbjct: 112 AFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD-ESHSEWVSCVRFSPNSSNPIIVSCGW 170
Query: 397 DKTVKVW 403
DK V VW
Sbjct: 171 DKLVNVW 177
Score = 142 (55.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 54/226 (23%), Positives = 93/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y H + V + F + S
Sbjct: 103 GHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D + +W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKLVNVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL G + + + SP+ L + + + ++W L K EL+ +
Sbjct: 222 NEGKHLYTLDGG-DIINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELKQEVISTSS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D +++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLVRVWQVTIGT 316
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 329 TLIGHDNWVRGVTFHPGGKYL-VSCGDDKTLRVWD-TANKRN----MKTLEAHSHFVTSL 382
TL GH+ WV ++ H + L +SC DKT+ +W T ++ N + L HSHFV+ +
Sbjct: 10 TLKGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 383 DFHRAHPYVVTGSVDKTVKVWE 404
+ ++GS D T+++W+
Sbjct: 70 VISSDGQFALSGSWDGTLRLWD 91
>RGD|1311303 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA;ISO] [GO:0071001 "U4/U6 snRNP"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 RGD:1311303 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 KO:K12662 CTD:9128
GeneTree:ENSGT00690000101787 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:CH473978 IPI:IPI00357902 RefSeq:NP_001100129.1
UniGene:Rn.162812 Ensembl:ENSRNOT00000019910 GeneID:298095
KEGG:rno:298095 UCSC:RGD:1311303 NextBio:643144 Uniprot:D4A7J8
Length = 521
Score = 297 (109.6 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 84/309 (27%), Positives = 132/309 (42%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P ++A+ +LW L GH +V I F
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
DQ L SC+AD S+KLW + + + + ++GH V V + P+ F+ + D++ +
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 347
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH V I DG+L + D RVW L T L GH
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 407
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ ++++P ++ATGS D T K+WD+ ++T+ H N
Sbjct: 408 EIYGISFSPN------------------GYHIATGSGDNTCKVWDLRQRRCVYTIPAHQN 449
Query: 336 WVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V GV F P G +L++ D T ++W +KTL H V LD + T
Sbjct: 450 LVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATC 509
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 510 SYDRTFKLW 518
Score = 276 (102.2 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/175 (36%), Positives = 91/175 (52%)
Query: 87 RSPTEWIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
RS W A E+ GH V + FH SL + DA R+WD TG L
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDF 204
GHL + I+F +G + + S D + K+WD+ +C+ T+ H + VTGV F P + DF
Sbjct: 404 GHLKEIYGISFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDF 463
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+L+ + D T K+W +KTL GH V + +S DG L+A+CS D T ++W
Sbjct: 464 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 267 (99.0 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 61/190 (32%), Positives = 95/190 (50%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--GHL 148
W + E A + GH V +V++HP + + D + RLWD E E LH GH
Sbjct: 307 WSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEA--QEEILHQEGHS 364
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
V DIAF Q G L + D ++WD+ T +C+ ++GH + G++F PN + +
Sbjct: 365 MGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATG 424
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETK 267
S D T K+W++ CV T+ H+ V +K P G L + + D+TA++W+
Sbjct: 425 SGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPL 484
Query: 268 AELRGHDHTV 277
L GH+ V
Sbjct: 485 KTLAGHEGKV 494
Score = 250 (93.1 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHP--VFSL------MASCSEDATIRLWDYETGEYER 142
W +P L GH + V ++FHP SL +ASC+ D +++LW ++ E
Sbjct: 257 WSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 316
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH V + + SG+ L + D S +LWD+ + + +GH V +AF +
Sbjct: 317 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 376
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ D ++W++ TG C+ L GH + + I SP+G +A+ S D+T +VW L
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLR 436
Query: 263 TKETKAELRGHDHTVECVAWAP 284
+ + H + V V + P
Sbjct: 437 QRRCVYTIPAHQNLVTGVKFEP 458
Score = 220 (82.5 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 66/227 (29%), Positives = 95/227 (41%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL- 246
G D ++ F PNS + +A K+W V + TL GH V I P T+
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 247 -------LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
LASC+ D + ++WSL + E A++ GH V V W P
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPS-------------- 333
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
+L T D++ +LWD+ + + GH V + FH G + G D R
Sbjct: 334 ----GRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGR 389
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
VWD R + LE H + + F ++ TGS D T KVW+ R
Sbjct: 390 VWDLRTGRCIMFLEGHLKEIYGISFSPNGYHIATGSGDNTCKVWDLR 436
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 222 (83.2 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 50/159 (31%), Positives = 89/159 (55%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV--QDIAFDQSGKLLVSC 166
V+ V + P L+A D T++++ +T ++ +L+GH V DI++D G L+ +
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYD--GALIATG 609
Query: 167 SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK 226
SAD ++K+W + C K++ HD +V + F+P S +A +D+ IK W+ V+
Sbjct: 610 SADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQ 669
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
TL GH + + + +SP G + S S+D + R+W T+E
Sbjct: 670 TLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE-RTRE 707
Score = 208 (78.3 bits), Expect = 9.0e-26, Sum P(2) = 9.0e-26
Identities = 54/176 (30%), Positives = 85/176 (48%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W R EK L G + V + P +A ED +IR++ +GE +GH +
Sbjct: 50 WDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAA 109
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V + +DQ G L S S D + +WD+ L ++GH +T FL + ++S+ +
Sbjct: 110 VTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGK 169
Query: 211 DKTIKMWEVATGYCVKTLTGHREWV-RQIKVSPDGTLLASCSNDHTARVWSLATKE 265
D +K W++ T +C KT+ GHR V + VS + L+ S D R W +A E
Sbjct: 170 DTMVKWWDLDTQHCFKTVVGHRTEVWGLVLVSEEKRLITGAS-DSELRAWDIAYLE 224
Score = 201 (75.8 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 39/122 (31%), Positives = 70/122 (57%)
Query: 99 KFALS--GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
KF LS GH+ PVI + +L+A+ S D +++W + G+ ++L H DSV + F
Sbjct: 582 KFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKF 641
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
L + D +K WD ++ ++T++GH + +A P+ D+V+S+S DK++++
Sbjct: 642 VPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRL 701
Query: 217 WE 218
WE
Sbjct: 702 WE 703
Score = 195 (73.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 63/244 (25%), Positives = 104/244 (42%)
Query: 130 IRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM-------STYQC 182
++L+D +G + H ++ ++ + V+ AD S+K WD ST +
Sbjct: 478 LQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKR 537
Query: 183 LKTMQGH----DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
L Q D V V++ PN + + D T+K++ V T +L GH+ V +
Sbjct: 538 LSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICM 597
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG L+A+ S D ++W L + L HD +V + + P
Sbjct: 598 DISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVP-------------- 643
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
T +D+ IK WD + TL GH + + P G Y+VS DK+L
Sbjct: 644 ----KSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSL 699
Query: 359 RVWD 362
R+W+
Sbjct: 700 RLWE 703
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 55/260 (21%), Positives = 115/260 (44%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH V+ ++F ++S +A+ S+K+W+ ST QC++TM ++ + F+P V
Sbjct: 413 GHRSDVRTLSFSSDNIAVLSGAAE-SIKIWNRSTLQCIRTMTC-EYALCSF-FVPGDRQV 469
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ ++ ++++++A+G ++T+ H + + +SPD + D + + W
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF---- 525
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
EL +++ + + + E LA D T+K++ V +
Sbjct: 526 ---ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLK 582
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF- 384
+L GH V + G + + D+ +++W K+L AH V L F
Sbjct: 583 FFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFV 642
Query: 385 HRAHPYVVTGSVDKTVKVWE 404
++H + G D+ +K W+
Sbjct: 643 PKSHLFFTAGK-DRKIKQWD 661
Score = 161 (61.7 bits), Expect = 9.0e-26, Sum P(2) = 9.0e-26
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D+ +K+W + G +L HD+ V + F P + G D+ ++ WD
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKFVPKSHLFFTAGKDRKIKQWDADKF 665
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++TLE H + L + YVV+ S DK++++WE
Sbjct: 666 EHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 144 (55.7 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/169 (22%), Positives = 73/169 (43%)
Query: 127 DATIRLWDYETGEYERALHGHL-----------DSVQDIAFDQSGKLLVSCSADMSLKLW 175
D +++ WD+E + E + L + V +++ + KLL D ++K++
Sbjct: 517 DKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIF 576
Query: 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV 235
+ T + ++ GH V + + + + S D+ +K+W + G C K+L H + V
Sbjct: 577 YVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSV 636
Query: 236 RQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+K P L + D + W E L GH + C+A +P
Sbjct: 637 MYLKFVPKSHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISP 685
Score = 129 (50.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 31/98 (31%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS+D I +WDV + S L+ L GH + + F LVS G D ++ WD +
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSGKDTMVKWWDLDTQ 181
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KT+ H V L ++TG+ D ++ W+
Sbjct: 182 HCFKTVVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Score = 116 (45.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 35/142 (24%), Positives = 58/142 (40%)
Query: 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
+WD GE L G V + G L D S++++ + + + T GH
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
VT + + + S S+D I +W+V + L GH++ + Q + LL S
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVSSG 168
Query: 252 NDHTARVWSLATKETKAELRGH 273
D + W L T+ + GH
Sbjct: 169 KDTMVKWWDLDTQHCFKTVVGH 190
Score = 107 (42.7 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
+WD+ + + +QG H VT + P+ + D +I+++ + +G T GH+
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
V +K G LAS S D VW + + L+GH +
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAI 152
Score = 50 (22.7 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
T+ GHR VR + S D + S + + + ++W+ +T
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAVLSGAAE-SIKIWNRST 445
Score = 43 (20.2 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
G +A + +H +W L E L+G H V C+ +P
Sbjct: 36 GRYVAVPACEHVF-IWDLRKGEKILILQGLKHEVTCLCPSP 75
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 262 (97.3 bits), Expect = 9.5e-26, Sum P(2) = 9.5e-26
Identities = 49/156 (31%), Positives = 81/156 (51%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH + FHP +A+ S D T++LWD G+ GH +V + G +
Sbjct: 392 GHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFV 451
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D + K+WD+++ +C T+ GH +V + F P S+ +L++S DKT+ +W+ TG
Sbjct: 452 ASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGI 511
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
C ++L GH + P G ++ASC ++W
Sbjct: 512 CEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLW 547
Score = 249 (92.7 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 65/200 (32%), Positives = 91/200 (45%)
Query: 88 SPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL--- 144
SP ++ + F L H PV V P ++ SC ED RLW L
Sbjct: 336 SPAKFDYKLKNIFRL--HELPVSCVSMQPHKDILVSCGED---RLWKVLGLPKCNVLLTG 390
Query: 145 HGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDF 204
GH D + D F SG L + S D ++KLWD+ C+ T +GH V + +F
Sbjct: 391 FGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNF 450
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
V S+S DKT K+W+V + C TL GH + V I+ P L + S D T +W T
Sbjct: 451 VASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTG 510
Query: 265 ETKAELRGHDHTVECVAWAP 284
+ L GH H++ + P
Sbjct: 511 ICEQSLYGHMHSINDAIFDP 530
Score = 202 (76.2 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 49/159 (30%), Positives = 75/159 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V + F P + + + S D T+ +WD TG E++L+GH+ S+ D FD G
Sbjct: 474 LYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGH 533
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
++ SC A KLWD + ++ V F + + AS + I + ++ +
Sbjct: 534 MIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKS 593
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
G K L GH + S DG +L S +D T R WS
Sbjct: 594 GEIHK-LMGHENEAHTVVFSHDGEILFSGGSDGTVRTWS 631
Score = 195 (73.7 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LAT S D T+KLWD+ G + T GH V T+H G ++ S DKT ++WD ++
Sbjct: 409 LATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSE 468
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
R TL H+ V S++F ++T S DKT+ +W+ R
Sbjct: 469 RCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDAR 508
Score = 193 (73.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 46/180 (25%), Positives = 79/180 (43%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH V +H + +AS S D T ++WD + L+GH DSV I F L
Sbjct: 434 GHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTL 493
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
++ SAD +L +WD T C +++ GH H++ F P + S K+W+
Sbjct: 494 LTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLL 553
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
+ ++ ++ G +LA S + + L + E +L GH++ V ++
Sbjct: 554 PIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGEIH-KLMGHENEAHTVVFS 612
Score = 159 (61.0 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L + D+ K+ + ++L T GH +W+ FHP G L + D T+++WD
Sbjct: 367 LVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKG 426
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ T E HS V S +H +V + S+DKT K+W+
Sbjct: 427 DCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWD 464
Score = 145 (56.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+ S DKT K+WDV S TL GH + V + F P L++ DKTL +WD
Sbjct: 450 FVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDART 509
Query: 366 KRNMKTLEAHSHFVTSLDFH-RAHPYVVTGSVDKTVKVWECR 406
++L H H + F R H + T K+W+ R
Sbjct: 510 GICEQSLYGHMHSINDAIFDPRGHMIASCDACGVT-KLWDFR 550
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L GH + IF P ++ASC +LWD+ ++ ++ FD SG
Sbjct: 515 SLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSG 574
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
++L S + + L D+ + + K M GH++ V F + + + S D T++ W
Sbjct: 575 RVLAQASGNGVIHLLDLKSGEIHKLM-GHENEAHTVVFSHDGEILFSGGSDGTVRTW 630
Score = 89 (36.4 bits), Expect = 9.5e-26, Sum P(2) = 9.5e-26
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
LA S + I L D+ SG + L+GH+N V F G+ L S G D T+R W
Sbjct: 577 LAQASGNGVIHLLDLKSGEI-HKLMGHENEAHTVVFSHDGEILFSGGSDGTVRTW 630
Score = 49 (22.3 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 20/88 (22%), Positives = 34/88 (38%)
Query: 317 KLWDVGSGSLLFTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
KLWD + ++ IG V F G+ L + + + D + K L H
Sbjct: 545 KLWDFRKLLPIVSIDIGPSPG-NEVNFDSSGRVLAQASGNGVIHLLDLKSGEIHK-LMGH 602
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ ++ F + +G D TV+ W
Sbjct: 603 ENEAHTVVFSHDGEILFSGGSDGTVRTW 630
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 297 (109.6 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 68/276 (24%), Positives = 125/276 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
+ H SP++ + + + S ++ T++ W + H + V+DIAF +
Sbjct: 173 MQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVNN-ISAHANGVRDIAFSPNDS 231
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
++C D ++K+W+ + + +T+ GH V + PN ++S S+D +K+W+ +
Sbjct: 232 KFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRS 291
Query: 222 GYCVKTLTGHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
CV TL G + V + + P+GT LLAS S D + R++ L T + +R + + C
Sbjct: 292 ANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSETDLSC 351
Query: 280 VAWAPGVASESISEAAXXXXXXXXX--XYLATGS-----RDKTIKLWDVGSGSLLFTL-- 330
VAW P + + ++ AA Y+ + R + + + +
Sbjct: 352 VAWHP-IHASMVTTAAYNGSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNTIDAVQK 410
Query: 331 --IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
H+ + V +HP G L + G DKT R W A
Sbjct: 411 IPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRA 446
Score = 194 (73.4 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
W P +S H + V + F P S +C +D+ I++W++ G+ ER L GH V
Sbjct: 204 WQPNFNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSAS 209
+ + + L+VS S D +KLWD + C+ T+ G H V F PN + S S
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVS 323
Query: 210 RDKTIKMWEVAT 221
RD++ +++++ T
Sbjct: 324 RDRSCRIFDLRT 335
Score = 172 (65.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 45/169 (26%), Positives = 77/169 (45%)
Query: 120 LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
L+AS S + T LW+ T +E + H + + + + L+S + ++K W +
Sbjct: 151 LVASHSGEFT--LWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPN- 207
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ + + H + V +AF PN L+ D IK+W G +TL+GH V+
Sbjct: 208 FNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSAD 267
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVA 287
P+ L+ S S D+ ++W + + L G HTV + P G A
Sbjct: 268 WHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTA 316
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+L +G ++ T+K W ++ + H N VR + F P ++CGDD +++W+ N
Sbjct: 191 WLLSGDQNGTVKYWQPNFNNVN-NISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNN 249
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +TL H V S D+H +V+GS D VK+W+ R
Sbjct: 250 GKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPR 290
Score = 152 (58.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 30/137 (21%), Positives = 63/137 (45%)
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
++ + + G+ L+ S LW+ T+ MQ H+ + + + + +++LS
Sbjct: 137 TINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGD 196
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
++ T+K W+ V ++ H VR I SP+ + +C +D ++W+ + +
Sbjct: 197 QNGTVKYWQPNFNN-VNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERT 255
Query: 270 LRGHDHTVECVAWAPGV 286
L GH V+ W P +
Sbjct: 256 LSGHHWEVKSADWHPNL 272
Score = 112 (44.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
+L G D IK+W+ +G TL GH +W V+ +HP +VS D +++WD
Sbjct: 233 FLTCGD-DSAIKIWNFNNGKEERTLSGH-HWEVKSADWHPNLGLIVSGSKDNLVKLWDPR 290
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV--DKTVKVWECR 406
+ + TL H V F + SV D++ ++++ R
Sbjct: 291 SANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLR 334
Score = 59 (25.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 26/137 (18%), Positives = 50/137 (36%)
Query: 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+D + +A+ S L + + +L + D+ T + H + V + P +L
Sbjct: 94 IDLLPSLAYSSSFNLNRRNNKN-NLAVLDLQTKFVHLSSNKVKHTINTVKWTPEGRRLLV 152
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
AS +W T + H + +K S L S + T + W
Sbjct: 153 ASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVN 212
Query: 268 AELRGHDHTVECVAWAP 284
+ H + V +A++P
Sbjct: 213 -NISAHANGVRDIAFSP 228
Score = 48 (22.0 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 374 AHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH + ++++H + T DKT + W
Sbjct: 414 AHEKAIHAVEYHPLGHLLCTAGSDKTARFW 443
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 297 (109.6 bits), Expect = 1.0e-25, P = 1.0e-25
Identities = 68/276 (24%), Positives = 125/276 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
+ H SP++ + + + S ++ T++ W + H + V+DIAF +
Sbjct: 173 MQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVNN-ISAHANGVRDIAFSPNDS 231
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
++C D ++K+W+ + + +T+ GH V + PN ++S S+D +K+W+ +
Sbjct: 232 KFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPRS 291
Query: 222 GYCVKTLTGHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
CV TL G + V + + P+GT LLAS S D + R++ L T + +R + + C
Sbjct: 292 ANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMKDMLVIRDSETDLSC 351
Query: 280 VAWAPGVASESISEAAXXXXXXXXX--XYLATGS-----RDKTIKLWDVGSGSLLFTL-- 330
VAW P + + ++ AA Y+ + R + + + +
Sbjct: 352 VAWHP-IHASMVTTAAYNGSISNFLLDSYIPDSNESVPKRSNNNSNLSTNTNNTIDAVQK 410
Query: 331 --IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
H+ + V +HP G L + G DKT R W A
Sbjct: 411 IPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRA 446
Score = 194 (73.4 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
W P +S H + V + F P S +C +D+ I++W++ G+ ER L GH V
Sbjct: 204 WQPNFNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEV 263
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSAS 209
+ + + L+VS S D +KLWD + C+ T+ G H V F PN + S S
Sbjct: 264 KSADWHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVS 323
Query: 210 RDKTIKMWEVAT 221
RD++ +++++ T
Sbjct: 324 RDRSCRIFDLRT 335
Score = 172 (65.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 45/169 (26%), Positives = 77/169 (45%)
Query: 120 LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
L+AS S + T LW+ T +E + H + + + + L+S + ++K W +
Sbjct: 151 LVASHSGEFT--LWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPN- 207
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ + + H + V +AF PN L+ D IK+W G +TL+GH V+
Sbjct: 208 FNNVNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSAD 267
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVA 287
P+ L+ S S D+ ++W + + L G HTV + P G A
Sbjct: 268 WHPNLGLIVSGSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTA 316
Score = 169 (64.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+L +G ++ T+K W ++ + H N VR + F P ++CGDD +++W+ N
Sbjct: 191 WLLSGDQNGTVKYWQPNFNNVN-NISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNN 249
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +TL H V S D+H +V+GS D VK+W+ R
Sbjct: 250 GKEERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWDPR 290
Score = 152 (58.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 30/137 (21%), Positives = 63/137 (45%)
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
++ + + G+ L+ S LW+ T+ MQ H+ + + + + +++LS
Sbjct: 137 TINTVKWTPEGRRLLVASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGD 196
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
++ T+K W+ V ++ H VR I SP+ + +C +D ++W+ + +
Sbjct: 197 QNGTVKYWQPNFNN-VNNISAHANGVRDIAFSPNDSKFLTCGDDSAIKIWNFNNGKEERT 255
Query: 270 LRGHDHTVECVAWAPGV 286
L GH V+ W P +
Sbjct: 256 LSGHHWEVKSADWHPNL 272
Score = 112 (44.5 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
+L G D IK+W+ +G TL GH +W V+ +HP +VS D +++WD
Sbjct: 233 FLTCGD-DSAIKIWNFNNGKEERTLSGH-HWEVKSADWHPNLGLIVSGSKDNLVKLWDPR 290
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV--DKTVKVWECR 406
+ + TL H V F + SV D++ ++++ R
Sbjct: 291 SANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLR 334
Score = 59 (25.8 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 26/137 (18%), Positives = 50/137 (36%)
Query: 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+D + +A+ S L + + +L + D+ T + H + V + P +L
Sbjct: 94 IDLLPSLAYSSSFNLNRRNNKN-NLAVLDLQTKFVHLSSNKVKHTINTVKWTPEGRRLLV 152
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
AS +W T + H + +K S L S + T + W
Sbjct: 153 ASHSGEFTLWNGMTFNFETIMQAHESPILTMKYSNHDEWLLSGDQNGTVKYWQPNFNNVN 212
Query: 268 AELRGHDHTVECVAWAP 284
+ H + V +A++P
Sbjct: 213 -NISAHANGVRDIAFSP 228
Score = 48 (22.0 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 374 AHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
AH + ++++H + T DKT + W
Sbjct: 414 AHEKAIHAVEYHPLGHLLCTAGSDKTARFW 443
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 80/277 (28%), Positives = 128/277 (46%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH+ + + + P + +AS S DAT +WD ++GE+E L GH + V+ + + SG
Sbjct: 48 GHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGS 107
Query: 162 LLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW- 217
LL +C D S+ +W++ Y+C + H +V V + P + + S S D TIK++
Sbjct: 108 LLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYK 167
Query: 218 EVATGY-CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW-SLATKETKAELRGHDH 275
E + C TL GH V I G + SCS+D T R+W S + + H
Sbjct: 168 EDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWKSYPPGNQEGVVVSGKH 227
Query: 276 TV-ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW--DVGS--GSLLFTL 330
T +CV G +I + +AT S D I+++ D S F L
Sbjct: 228 TKWKCVCVLSGYHDRTIYDV----HWSKVSGLIATASGDDCIRIFKEDTNSDRNQPSFQL 283
Query: 331 IG-----HDNWVRGVTFHPGGK-YLVSCGDDKTLRVW 361
+ H V + +HP + L +C DD T+++W
Sbjct: 284 VATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 70/226 (30%), Positives = 110/226 (48%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTMQ-GHDHNVTGVAFLPNS 202
GH D V +A+ +G +L SC D ++++W + + C ++ GH + + + P
Sbjct: 3 GHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSPCG 62
Query: 203 DFVLSASRDKTIKMWEVATGY--CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
F+ SAS D T +W+ +G C TL GH V+ + S G+LLA+C D + +W
Sbjct: 63 TFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGSLLATCGRDKSVWIWE 122
Query: 261 LATK---ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
+ E + + H V+ V W P ++ I LA+ S D TIK
Sbjct: 123 VQEDDEYECASVIHSHTQDVKKVVWHP---TKEI---------------LASCSYDDTIK 164
Query: 318 LW--DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
L+ D S TL GH++ V ++F G +VSC DDKT+R+W
Sbjct: 165 LYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIW 210
Score = 250 (93.1 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 73/229 (31%), Positives = 112/229 (48%)
Query: 186 MQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW-EVATGYCVKTLT--GHREWVRQIKVSP 242
M GH+ V VA+ PN + S DKTI++W + + KT+ GH+ +R + SP
Sbjct: 1 MTGHEDRVWSVAWSPNGFVLASCGGDKTIRIWGKEGDKWICKTILEDGHQRTIRSLGWSP 60
Query: 243 DGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWAPGVASESISEAAXXXXX 300
GT LAS S D T +W + E + A L GH++ V+ V W+ S S+
Sbjct: 61 CGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWS---VSGSL--------- 108
Query: 301 XXXXXYLATGSRDKTIKLWDVGSGS---LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LAT RDK++ +W+V + H V+ V +HP + L SC D T
Sbjct: 109 ------LATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDT 162
Query: 358 LRVW--DTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++++ D + TLE H V S+ F + +V+ S DKTV++W+
Sbjct: 163 IKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRIWK 211
Score = 214 (80.4 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 66/239 (27%), Positives = 115/239 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDY-ETGEYERA--LHGHLDSVQDIAFDQ 158
L GH + V V + SL+A+C D ++ +W+ E EYE A +H H V+ + +
Sbjct: 90 LEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHP 149
Query: 159 SGKLLVSCSADMSLKLW--DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ ++L SCS D ++KL+ D + C T++GH+ V ++F + D ++S S DKT+++
Sbjct: 150 TKEILASCSYDDTIKLYKEDEDDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDDKTVRI 209
Query: 217 WE----------VATGY-----CVKTLTG-HREWVRQIKVSPDGTLLASCSNDHTARVWS 260
W+ V +G CV L+G H + + S L+A+ S D R++
Sbjct: 210 WKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDCIRIFK 269
Query: 261 LATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW 319
++T ++ + + + VA S ++ LAT S D T+KLW
Sbjct: 270 ---EDTNSDR--NQPSFQLVATQRKAHSMDVNSICWHPKDENI---LATCSDDGTVKLW 320
Score = 211 (79.3 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 69/277 (24%), Positives = 126/277 (45%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST--YQCLKTMQGHDHNVTGVAFLPNSD 203
GH +++ + + G L S S D + +WD + ++C T++GH++ V V + +
Sbjct: 48 GHQRTIRSLGWSPCGTFLASASFDATTCIWDQKSGEFECNATLEGHENEVKSVDWSVSGS 107
Query: 204 FVLSASRDKTIKMWEVATG--Y-CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + RDK++ +WEV Y C + H + V+++ P +LASCS D T +++
Sbjct: 108 LLATCGRDKSVWIWEVQEDDEYECASVIHSHTQDVKKVVWHPTKEILASCSYDDTIKLYK 167
Query: 261 LATKETKA--ELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
+ L GH+ TV +++ G + + I + Y G+++ +
Sbjct: 168 EDEDDWSCCDTLEGHESTVWSISF-DG-SGDRIVSCSDDKTVRIWKSY-PPGNQEGVVVS 224
Query: 319 WDVGSGSLLFTLIG-HDNWVRGVTFHP-GGKYLVSCGDDKTLRVW--DTANKRNMKTLE- 373
+ L G HD + V + G + GDD +R++ DT + RN + +
Sbjct: 225 GKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDD-CIRIFKEDTNSDRNQPSFQL 283
Query: 374 ------AHSHFVTSLDFH-RAHPYVVTGSVDKTVKVW 403
AHS V S+ +H + + T S D TVK+W
Sbjct: 284 VATQRKAHSMDVNSICWHPKDENILATCSDDGTVKLW 320
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 296 (109.3 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 71/245 (28%), Positives = 112/245 (45%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W + G L H + + +++ G ++S D + +WD
Sbjct: 238 TLLATGSYDGFARIWTKD-GNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAH 296
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + ++ +KT GH V I
Sbjct: 297 TGEAKQQFPFHSAPALDVDWQSNNTFA-SCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAI 355
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ +L+ H+ + + W+P + A
Sbjct: 356 KWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLML 415
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
L + S D T++LWDV G + TL H V V F P G+YL S DK +
Sbjct: 416 AS------LDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCV 469
Query: 359 RVWDT 363
+W+T
Sbjct: 470 HIWNT 474
Score = 231 (86.4 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 67/264 (25%), Positives = 120/264 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + QS
Sbjct: 262 LGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QSNN 320
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P + + S S D T+K+W +
Sbjct: 321 TFASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQ 380
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
CV L H + + IK SP G +N+ A + LA+ ++ + D TV
Sbjct: 381 DSCVHDLQAHNKEIYTIKWSPTGP----GTNNPNANLM-LASLDSAS----FDSTVRLWD 431
Query: 282 WAPGVASESIS---EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR 338
G+ +++ E YLA+GS DK + +W+ +G+L+ + G +
Sbjct: 432 VDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRGTGG-IF 490
Query: 339 GVTFHPGGKYLVSCGDDKTLRVWD 362
V ++ G + + D ++ V D
Sbjct: 491 EVCWNAAGDKVGASASDGSVCVLD 514
Score = 226 (84.6 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 88/334 (26%), Positives = 133/334 (39%)
Query: 97 PEK-FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERAL-H----G 146
P K L GH S V ++PV L+AS S D+T R+W+ +G + L H G
Sbjct: 159 PNKAVVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREG 218
Query: 147 HLD--SVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
D S +D+ ++ G LL + S D ++W T+ H + + +
Sbjct: 219 GQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIWTKDG-NLASTLGQHKGPIFALKWNKK 277
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+F+LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 278 GNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTF-ASCSTDMCIHVCKL 336
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 337 GQDRPIKTFQGHTNEVNAIKWDP------------------TGNLLASCSDDMTLKIWSM 378
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK------------YLVSCGDDKTLRVWDTANKRNM 369
S + L H+ + + + P G L S D T+R+WD +
Sbjct: 379 KQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICI 438
Query: 370 KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
TL H V S+ F Y+ +GS DK V +W
Sbjct: 439 HTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIW 472
Score = 155 (59.6 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 66/287 (22%), Positives = 109/287 (37%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ----------GHD--- 190
L GH V A++ LL S S D + ++W++S + Q G D
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 191 -HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLAS 249
+VT + + + + S D ++W G TL H+ + +K + G + S
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIW-TKDGNLASTLGQHKGPIFALKWNKKGNFILS 283
Query: 250 CSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT 309
D T +W T E K + H V W S + A+
Sbjct: 284 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ----SNNT---------------FAS 324
Query: 310 GSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM 369
S D I + +G + T GH N V + + P G L SC DD TL++W +
Sbjct: 325 CSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCV 384
Query: 370 KTLEAHSHFVTSLDFHRAHP------------YVVTGSVDKTVKVWE 404
L+AH+ + ++ + P + + S D TV++W+
Sbjct: 385 HDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWD 431
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 296 (109.3 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 84/309 (27%), Positives = 131/309 (42%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P ++A+ +LW L GH +V I F
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
DQ L SC+AD S+KLW + + + + ++GH V V + P+ F+ + D++ +
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWR 347
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH V I DG+L + D RVW L T L GH
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 407
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ + ++P ++ATGS D T K+WD+ ++T+ H N
Sbjct: 408 EIYGINFSPN------------------GYHIATGSGDNTCKVWDLRQRRCVYTIPAHQN 449
Query: 336 WVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V GV F P G +L++ D T ++W +KTL H V LD + T
Sbjct: 450 LVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATC 509
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 510 SYDRTFKLW 518
Score = 268 (99.4 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 62/175 (35%), Positives = 90/175 (51%)
Query: 87 RSPTEWIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
RS W A E+ GH V + FH SL + DA R+WD TG L
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDF 204
GHL + I F +G + + S D + K+WD+ +C+ T+ H + VTGV F P + +F
Sbjct: 404 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 463
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+L+ + D T K+W +KTL GH V + +S DG L+A+CS D T ++W
Sbjct: 464 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 250 (93.1 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHP--VFSL------MASCSEDATIRLWDYETGEYER 142
W +P L GH + V ++FHP SL +ASC+ D +++LW ++ E
Sbjct: 257 WSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 316
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH V + + SG+ L + D S +LWD+ + + +GH V +AF +
Sbjct: 317 DIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 376
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ D ++W++ TG C+ L GH + + I SP+G +A+ S D+T +VW L
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
Query: 263 TKETKAELRGHDHTVECVAWAP 284
+ + H + V V + P
Sbjct: 437 QRRCVYTIPAHQNLVTGVKFEP 458
Score = 222 (83.2 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 66/227 (29%), Positives = 96/227 (42%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL- 246
G D ++ F PNS + +A K+W V + TL GH V I P T+
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 247 -------LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
LASC+ D + ++WSL + E A++ GH V V W P
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPS-------------- 333
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
+L T D++ +LWD+ + + GH V + FH G + G D R
Sbjct: 334 ----GRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGR 389
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
VWD R + LE H + ++F ++ TGS D T KVW+ R
Sbjct: 390 VWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 298 (110.0 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 73/254 (28%), Positives = 122/254 (48%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W GE L H + + +++ G L++ S D + +WD+
Sbjct: 337 TLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK 395
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
+ + + H V + N F S S D I + ++ KT TGH+ V +
Sbjct: 396 AEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCV 454
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G+LLASCS+D TA++W++ +LR H + + W+P G + + ++
Sbjct: 455 KWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLT- 513
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T+KLWD G +L + GH V + F P G+Y+ S DK+
Sbjct: 514 ---------LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKS 564
Query: 358 LRVWDTANKRNMKT 371
+ +W + +KT
Sbjct: 565 IHIWSIKEGKIVKT 578
Score = 225 (84.3 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 53/171 (30%), Positives = 88/171 (51%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P K +GH+ V V + P SL+ASCS+D+T ++W+ + + L H + I +
Sbjct: 440 PAK-TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRW 498
Query: 157 DQSGK---------LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+G L S S D ++KLWD + L + GH V +AF PN +++ S
Sbjct: 499 SPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIAS 558
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
S DK+I +W + G VKT TG+ + ++ + +G +A+C D++ V
Sbjct: 559 GSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVCWNKEGNKIAACFADNSVCV 608
Score = 218 (81.8 bits), Expect = 4.9e-15, P = 4.9e-15
Identities = 81/346 (23%), Positives = 139/346 (40%)
Query: 88 SPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-G 146
S T IP + + L GH S V + P SL+AS S DAT R+W G + +A+H G
Sbjct: 248 SQTSHIPNSDVRI-LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSF-KAVHTG 305
Query: 147 ---------HL-----DSVQDIA-FDQSGK--LLVSCSADMSLKLWDMSTYQCLKTMQGH 189
H + +D+ D +G+ LL + S D ++W ++ + + T+ H
Sbjct: 306 RNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNG-ELISTLSKH 364
Query: 190 DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLAS 249
+ + + D++L+ S D+T +W+V + H + + A+
Sbjct: 365 KGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFAT 423
Query: 250 CSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT 309
S D + + GH V CV W P LA+
Sbjct: 424 SSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDP------------------TGSLLAS 465
Query: 310 GSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRV 360
S D T K+W++ + + L H + + + P G L S D T+++
Sbjct: 466 CSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKL 525
Query: 361 WDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
WD + + + H V SL F Y+ +GS+DK++ +W +
Sbjct: 526 WDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIK 571
Score = 175 (66.7 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 59/261 (22%), Positives = 111/261 (42%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
LS H+ P+ + ++ + + S D T +WD + E+++ H D+ + +
Sbjct: 361 LSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVS 420
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
S S D + L + + KT GH V V + P + S S D T K+W +
Sbjct: 421 FATS-STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ 479
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
V L H + + I+ SP G +N + + +LA+ + ++ D + +
Sbjct: 480 STFVHDLREHTKEIYTIRWSPTGP---GTNNPN--KQLTLASASFDSTVKLWDAELGKML 534
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341
+ E + A Y+A+GS DK+I +W + G ++ T G+ + V
Sbjct: 535 CSFNGHREPVYSLAFSPNGE----YIASGSLDKSIHIWSIKEGKIVKTYTGNGG-IFEVC 589
Query: 342 FHPGGKYLVSCGDDKTLRVWD 362
++ G + +C D ++ V D
Sbjct: 590 WNKEGNKIAACFADNSVCVLD 610
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 70/250 (28%), Positives = 119/250 (47%)
Query: 116 PVFSLMASCSEDATIRLW----DYETGEY---ERALHGHLDSVQDIAFDQSGKLLVSCSA 168
P + S S D + +W D ++GE +++L GH ++ D++ G +S S
Sbjct: 33 PKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSW 92
Query: 169 DMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
D S++LWD+S + +++ GH +V V+F P++ ++SASRDKTIK+W C T+
Sbjct: 93 DHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTI 151
Query: 229 TG--HREWVRQIKVSP--DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
T H +W+ ++ SP + ++ SC D +VW+L + L GH + V +P
Sbjct: 152 TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISP 211
Query: 285 GVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
A+G +D KLWDV G L++L + + + F P
Sbjct: 212 D------------------GSLCASGGKDGVAKLWDVKEGKHLYSL-ETGSTINSLCFSP 252
Query: 345 GGKYLVSCGD 354
+L + D
Sbjct: 253 CDYWLCAATD 262
Score = 247 (92.0 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 68/269 (25%), Positives = 124/269 (46%)
Query: 146 GHLDSVQDIAFDQSGKL--LVSCSADMSLKLWDMSTYQ-------CLKTMQGHDHNVTGV 196
GH D V ++ KL +VS S D L +W+++T K++ GH + V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
+ + F LS S D ++++W+++ G +++ GH V + SPD + S S D T
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 257 RVWSLATKETKAELRGHDHT--VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDK 314
++W+ + K + HT + CV ++P +++I + + DK
Sbjct: 139 KLWNTLA-QCKYTITDQQHTDWITCVRFSPS-PNQAI---------------IVSCGWDK 181
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
+K+W++ + L L GH + VT P G S G D ++WD +++ +LE
Sbjct: 182 LVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLET 241
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
S + SL F Y + + D+ +++W
Sbjct: 242 GST-INSLCFSPCD-YWLCAATDRFIRIW 268
Score = 242 (90.2 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 69/232 (29%), Positives = 105/232 (45%)
Query: 188 GHDHNVTGVAFL--PNSDFVLSASRDKTIKMWEVAT-------GYCVKTLTGHREWVRQI 238
GH VT V+ P ++SASRDK + +W + T G K+LTGH + + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S DH+ R+W L+ ET GH V V+++P
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD------------- 125
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG--HDNWVRGVTFHPGGKY--LVSCGD 354
+ + SRDKTIKLW+ +T+ H +W+ V F P +VSCG
Sbjct: 126 -----NRQIVSASRDKTIKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGW 179
Query: 355 DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
DK ++VW+ N K LE H+ + ++ +G D K+W+ +
Sbjct: 180 DKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK 231
Score = 235 (87.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 58/175 (33%), Positives = 90/175 (51%)
Query: 99 KFALSGHRSPV--IKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
K +L+GH + + + +F+L S S D ++RLWD GE R+ GH V ++F
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFAL--SGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSF 122
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLP--NSDFVLSASRDK 212
+ +VS S D ++KLW+ + QC T+ H +T V F P N ++S DK
Sbjct: 123 SPDNRQIVSASRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDK 181
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
+K+W + K L GH + + +SPDG+L AS D A++W + KE K
Sbjct: 182 LVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDV--KEGK 234
Score = 175 (66.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 48/171 (28%), Positives = 78/171 (45%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAFDQSGK- 161
GH S V V F P + S S D TI+LW+ +Y H D + + F S
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQ 171
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
++VSC D +K+W++ K ++GH + V P+ S +D K+W+V
Sbjct: 172 AIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK 231
Query: 221 TGYCVKTL-TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
G + +L TG + + SP L + + D R+W+L +K +E+
Sbjct: 232 EGKHLYSLETGST--INSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEI 279
Score = 87 (35.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
A+G +D KLWDV G L++L + + + F P Y + D+ +R+W+ +K
Sbjct: 217 ASGGKDGVAKLWDVKEGKHLYSL-ETGSTINSLCFSPCD-YWLCAATDRFIRIWNLESKL 274
Query: 368 ------NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+K + + TSL + + GS D + V+E +
Sbjct: 275 IISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEVK 319
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 70/250 (28%), Positives = 119/250 (47%)
Query: 116 PVFSLMASCSEDATIRLW----DYETGEY---ERALHGHLDSVQDIAFDQSGKLLVSCSA 168
P + S S D + +W D ++GE +++L GH ++ D++ G +S S
Sbjct: 33 PKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSW 92
Query: 169 DMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
D S++LWD+S + +++ GH +V V+F P++ ++SASRDKTIK+W C T+
Sbjct: 93 DHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLA-QCKYTI 151
Query: 229 TG--HREWVRQIKVSP--DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
T H +W+ ++ SP + ++ SC D +VW+L + L GH + V +P
Sbjct: 152 TDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISP 211
Query: 285 GVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
A+G +D KLWDV G L++L + + + F P
Sbjct: 212 D------------------GSLCASGGKDGVAKLWDVKEGKHLYSL-ETGSTINSLCFSP 252
Query: 345 GGKYLVSCGD 354
+L + D
Sbjct: 253 CDYWLCAATD 262
Score = 247 (92.0 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 68/269 (25%), Positives = 124/269 (46%)
Query: 146 GHLDSVQDIAFDQSGKL--LVSCSADMSLKLWDMSTYQ-------CLKTMQGHDHNVTGV 196
GH D V ++ KL +VS S D L +W+++T K++ GH + V
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
+ + F LS S D ++++W+++ G +++ GH V + SPD + S S D T
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTI 138
Query: 257 RVWSLATKETKAELRGHDHT--VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDK 314
++W+ + K + HT + CV ++P +++I + + DK
Sbjct: 139 KLWNTLA-QCKYTITDQQHTDWITCVRFSPS-PNQAI---------------IVSCGWDK 181
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
+K+W++ + L L GH + VT P G S G D ++WD +++ +LE
Sbjct: 182 LVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSLET 241
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
S + SL F Y + + D+ +++W
Sbjct: 242 GST-INSLCFSPCD-YWLCAATDRFIRIW 268
Score = 242 (90.2 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 69/232 (29%), Positives = 105/232 (45%)
Query: 188 GHDHNVTGVAFL--PNSDFVLSASRDKTIKMWEVAT-------GYCVKTLTGHREWVRQI 238
GH VT V+ P ++SASRDK + +W + T G K+LTGH + + +
Sbjct: 19 GHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDV 78
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S S DH+ R+W L+ ET GH V V+++P
Sbjct: 79 SISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPD------------- 125
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG--HDNWVRGVTFHPGGKY--LVSCGD 354
+ + SRDKTIKLW+ +T+ H +W+ V F P +VSCG
Sbjct: 126 -----NRQIVSASRDKTIKLWNT-LAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGW 179
Query: 355 DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
DK ++VW+ N K LE H+ + ++ +G D K+W+ +
Sbjct: 180 DKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK 231
Score = 235 (87.8 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 58/175 (33%), Positives = 90/175 (51%)
Query: 99 KFALSGHRSPV--IKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
K +L+GH + + + +F+L S S D ++RLWD GE R+ GH V ++F
Sbjct: 65 KKSLTGHSQAINDVSISSDGLFAL--SGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSF 122
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLP--NSDFVLSASRDK 212
+ +VS S D ++KLW+ + QC T+ H +T V F P N ++S DK
Sbjct: 123 SPDNRQIVSASRDKTIKLWN-TLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDK 181
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
+K+W + K L GH + + +SPDG+L AS D A++W + KE K
Sbjct: 182 LVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDV--KEGK 234
Score = 175 (66.7 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 48/171 (28%), Positives = 78/171 (45%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAFDQSGK- 161
GH S V V F P + S S D TI+LW+ +Y H D + + F S
Sbjct: 112 GHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQ 171
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
++VSC D +K+W++ K ++GH + V P+ S +D K+W+V
Sbjct: 172 AIIVSCGWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVK 231
Query: 221 TGYCVKTL-TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
G + +L TG + + SP L + + D R+W+L +K +E+
Sbjct: 232 EGKHLYSLETGST--INSLCFSPCDYWLCAAT-DRFIRIWNLESKLIISEI 279
Score = 87 (35.7 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 27/105 (25%), Positives = 48/105 (45%)
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
A+G +D KLWDV G L++L + + + F P Y + D+ +R+W+ +K
Sbjct: 217 ASGGKDGVAKLWDVKEGKHLYSL-ETGSTINSLCFSPCD-YWLCAATDRFIRIWNLESKL 274
Query: 368 ------NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+K + + TSL + + GS D + V+E +
Sbjct: 275 IISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYVYEVK 319
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 302 (111.4 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 72/269 (26%), Positives = 134/269 (49%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVA- 197
+ ++ L D V+ + + +++ D ++ +W+ T +K+ + +N A
Sbjct: 6 DIKKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTAR 65
Query: 198 FLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257
F+ ++++ S D I+++ T +K+ H +++R I V P + S S+D +
Sbjct: 66 FIAKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIK 125
Query: 258 VWSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTI 316
+W + ++ GH H V +AW P ++ AT S DKT+
Sbjct: 126 LWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQ-----------------FATASLDKTV 168
Query: 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEA 374
K+W + S FTL GH+ + V + GG+ YL+S DDK +++WD +K ++TLE
Sbjct: 169 KVWSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWDYQSKTCVQTLEG 228
Query: 375 HSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
HS+ V+ + +H P +++GS D TVK+W
Sbjct: 229 HSNNVSVVCYHPELPLILSGSEDGTVKLW 257
Score = 296 (109.3 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 82/305 (26%), Positives = 143/305 (46%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS-VQDIAFD 157
K LS V V HP + + D + +W+YET ++ ++ V+ F
Sbjct: 8 KKKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFI 67
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+ +V+ S D +++++ +T + +K+ + H + + P ++LS+S D IK+W
Sbjct: 68 AKKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSSSDDMFIKLW 127
Query: 218 EVATGYC-VKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+ G+ + GH +V I +P D A+ S D T +VWS+ + L GH+
Sbjct: 128 DYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEK 187
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ V + G E YL +G+ DK +K+WD S + + TL GH N
Sbjct: 188 GINSVEYFSG------GEKP----------YLISGADDKLVKIWDYQSKTCVQTLEGHSN 231
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
V V +HP ++S +D T+++W ++ R +TL FV S++F R ++ G
Sbjct: 232 NVSVVCYHPELPLILSGSEDGTVKLWHSSTYRLERTLNYGMGFVWSMNFLRGSNFIGLGY 291
Query: 396 VDKTV 400
D TV
Sbjct: 292 DDGTV 296
Score = 166 (63.5 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 53/226 (23%), Positives = 91/226 (40%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL-TGHREWVRQIKVSP 242
K + V V P ++L++ D + +W T VK+ VR +
Sbjct: 9 KKLSTRSDRVKSVDIHPTEPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIA 68
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXX 302
+ + S+D RV++ T E H + C+ P +
Sbjct: 69 KKQWIVTGSDDTYIRVYNYNTMEKIKSFEAHADYIRCIIVHPTLP--------------- 113
Query: 303 XXXYLATGSRDKTIKLWDVGSG-SLLFTLIGHDNWVRGVTFHPGG-KYLVSCGDDKTLRV 360
Y+ + S D IKLWD G S GH ++V + ++P + DKT++V
Sbjct: 114 ---YILSSSDDMFIKLWDYEKGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKV 170
Query: 361 WDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
W + TLE H + S+++ PY+++G+ DK VK+W+
Sbjct: 171 WSINSPHPHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIWD 216
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 84/284 (29%), Positives = 136/284 (47%)
Query: 99 KFALS-GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIA 155
K LS GH + V + P +AS S DAT+ +WD ++GE+E L GH + V+ ++
Sbjct: 52 KTVLSDGHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVS 111
Query: 156 FDQSGKLLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK 212
+ +SG LL +CS D S+ +W+++ Y+C + H +V V + P+ D + SAS D
Sbjct: 112 WSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDN 171
Query: 213 TIKMW--EVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
TIK++ ++A TL H V I G LASCS+D T ++W +
Sbjct: 172 TIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNEF 231
Query: 269 ELRGHDHTV--ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL 326
+ D+T +CV G S S+ + + LAT D ++++ GS
Sbjct: 232 GVSCPDNTPVWKCVCTLAGYHSRSVYDISWCKQSGL----LATACGDDMVRIFKEVEGSS 287
Query: 327 ----LFTLIG----HDNWVRGVTFHPGGK-YLVSCGDDKTLRVW 361
F ++G H V V ++P LV+ DD +++W
Sbjct: 288 PHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVKLW 331
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 75/236 (31%), Positives = 112/236 (47%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTM--QGHDHNVT 194
E + L GH + G +L +C D ++++W D S KT+ GH +
Sbjct: 5 ELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIR 64
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGY--CVKTLTGHREWVRQIKVSPDGTLLASCSN 252
VA+ P ++ SAS D T+ +W+ +G C TL GH V+ + S G+LLA+CS
Sbjct: 65 DVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSR 124
Query: 253 DHTARVWSLATK---ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLAT 309
D + VW +A + E A L H V+ V W P E I LA+
Sbjct: 125 DKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHP---HEDI---------------LAS 166
Query: 310 GSRDKTIKLW--DVGSG--SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
S D TIKL+ D+ S TL+ H++ V ++F G L SC DD+T+++W
Sbjct: 167 ASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIW 222
Score = 256 (95.2 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 75/272 (27%), Positives = 133/272 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEY---ERALH-GHLDSVQDIAFD 157
L+GHR +HP +++A+C ED TIR+W + + + L GH +++D+A+
Sbjct: 10 LTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHSRTIRDVAWS 69
Query: 158 QSGKLLVSCSADMSLKLWDMST--YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ L S S D ++ +WD + ++C T++GH++ V V++ + + + SRDK++
Sbjct: 70 PCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSRDKSVW 129
Query: 216 MWEVATG--Y-CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS--LATKETKA-- 268
+WEVA Y C L H + V++++ P +LAS S D+T +++ LA + +
Sbjct: 130 VWEVAQEDEYECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFD 189
Query: 269 ELRGHDHTVECVAW-APG--VASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
L H+ TV +++ G +AS S + D T +W
Sbjct: 190 TLVSHESTVWSISFDGSGNRLASCSDDQTVKIWQEYKPGNEFGVSCPDNT-PVW-----K 243
Query: 326 LLFTLIG-HDNWVRGVTF-HPGGKYLVSCGDD 355
+ TL G H V +++ G +CGDD
Sbjct: 244 CVCTLAGYHSRSVYDISWCKQSGLLATACGDD 275
Score = 222 (83.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 69/241 (28%), Positives = 113/241 (46%)
Query: 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW--EVATGYCVKTLT--GHR 232
M + L+ + GH G + P + + + DKTI++W + + + KT+ GH
Sbjct: 1 MGKLELLQCLTGHRGRAWGAGWHPKGNVLATCGEDKTIRIWAEDASQRWVAKTVLSDGHS 60
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWAPGVASES 290
+R + SP G LAS S D T +W + E + A L GH++ V+ V+W+ S S
Sbjct: 61 RTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFECNATLEGHENEVKSVSWSK---SGS 117
Query: 291 ISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS---LLFTLIGHDNWVRGVTFHPGGK 347
+ LAT SRDK++ +W+V L H V+ V +HP
Sbjct: 118 L---------------LATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVEWHPHED 162
Query: 348 YLVSCGDDKTLRVW--DTANK--RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
L S D T++++ D A+ + TL +H V S+ F + + + S D+TVK+W
Sbjct: 163 ILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDDQTVKIW 222
Query: 404 E 404
+
Sbjct: 223 Q 223
Score = 215 (80.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 80/303 (26%), Positives = 145/303 (47%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST--YQC 182
+EDA+ R W +T + GH +++D+A+ G+ L S S D ++ +WD + ++C
Sbjct: 42 AEDASQR-WVAKTVLSD----GHSRTIRDVAWSPCGQYLASASFDATVAIWDKKSGEFEC 96
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG--Y-CVKTLTGHREWVRQIK 239
T++GH++ V V++ + + + SRDK++ +WEVA Y C L H + V++++
Sbjct: 97 NATLEGHENEVKSVSWSKSGSLLATCSRDKSVWVWEVAQEDEYECAAVLNTHTQDVKKVE 156
Query: 240 VSPDGTLLASCSNDHTARVWS--LATKETKA--ELRGHDHTVECVAW-APG--VASESIS 292
P +LAS S D+T +++ LA + + L H+ TV +++ G +AS S
Sbjct: 157 WHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHESTVWSISFDGSGNRLASCSDD 216
Query: 293 EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTF-HPGGKYLV 350
+ D T +W + TL G H V +++ G
Sbjct: 217 QTVKIWQEYKPGNEFGVSCPDNT-PVW-----KCVCTLAGYHSRSVYDISWCKQSGLLAT 270
Query: 351 SCGDDKTLRVWDTA--NKRNMKTLE------AHSHFVTSLDFH-RAHPYVVTGSVDKTVK 401
+CGDD +R++ + + T E AHS V +++++ +VT S D VK
Sbjct: 271 ACGDDM-VRIFKEVEGSSPHEPTFEMVGSKHAHSQDVNTVEWNPTVVGLLVTTSDDGDVK 329
Query: 402 VWE 404
+W+
Sbjct: 330 LWK 332
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 77/276 (27%), Positives = 123/276 (44%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE----RALHGHLDSVQDIAF 156
+L GH V +V + P +A S DA+ +W+ E E +L GH V+ +A+
Sbjct: 64 SLEGHEKTVRRVAWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAW 123
Query: 157 DQSGKLLVSCSADMSLKLWDM---STYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
D +G LL +CS D S+ +W M + ++CL GH ++ V + PN + + S+S D T
Sbjct: 124 DSTGTLLATCSRDKSIWIWQMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDT 183
Query: 214 IKMWEVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR 271
IK W+ G C+ TLTGH + + + DG L SC D W KE + +
Sbjct: 184 IKFWKDIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKF-DKENEKWIN 242
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
E + S++ + S D K + + +L
Sbjct: 243 IFKFKNENSRPIYSIDWSSLTNTIVTGSADDSIIFYEQESDDTPDK-YKI----ILKKKN 297
Query: 332 GHDNWVRGVTFHPGGK-YLVSCGDDKTLRVWDTANK 366
HD+ V ++P K L SCGDD +++W+ +K
Sbjct: 298 AHDSDVNCTKWNPKFKNILASCGDDGFIKIWELQDK 333
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 80/273 (29%), Positives = 136/273 (49%)
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFV 205
D V ++A+ +G++L +C+ D +++W T + +++++GH+ V VA+ P F+
Sbjct: 25 DKVWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFL 84
Query: 206 LSASRDKTIKMWEVATGYC----VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
AS D + +WE + V +L GH V+ + GTLLA+CS D + +W +
Sbjct: 85 AGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQM 144
Query: 262 ATK---ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
E + GH ++CV W P +E + LA+ S D TIK
Sbjct: 145 EDDNDFECLSINSGHGQDIKCVLWHP---NEEL---------------LASSSYDDTIKF 186
Query: 319 W-DV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW--DTANKR--NM-KT 371
W D+ G + TL GH++ + + F+ G LVSCG+DK + W D N++ N+ K
Sbjct: 187 WKDIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFDKENEKWINIFKF 246
Query: 372 LEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+S + S+D+ +VTGS D ++ +E
Sbjct: 247 KNENSRPIYSIDWSSLTNTIVTGSADDSIIFYE 279
Score = 201 (75.8 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 48/181 (26%), Positives = 94/181 (51%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYET-GEYE--RALHGHLDSVQDIAFDQSGKLLVS 165
V + +HP ++A+C+ D I++W +T G++ ++L GH +V+ +A+ G+ L
Sbjct: 27 VWNLAWHPNGEILATCANDKYIQIWSKDTNGKWGLVQSLEGHEKTVRRVAWSPCGRFLAG 86
Query: 166 CSADMSLKLWDMST----YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
S D S +W+ S + + +++GH + V VA+ + + SRDK+I +W++
Sbjct: 87 ASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMED 146
Query: 222 GY---CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA--ELRGHDHT 276
C+ +GH + ++ + P+ LLAS S D T + W + + L GH+ +
Sbjct: 147 DNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKFWKDIDGDWECINTLTGHESS 206
Query: 277 V 277
+
Sbjct: 207 I 207
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 301 (111.0 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 75/268 (27%), Positives = 134/268 (50%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + S +++ + S+ +W+ T +KT + D V F
Sbjct: 6 DIKRKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ ++V++ + D I+++ T V H +++R I V P + + S+D ++
Sbjct: 66 VARKNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKL 125
Query: 259 WSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K + +++ GH H V + P ++ A+ S D+TIK
Sbjct: 126 WDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQ-----------------FASASLDRTIK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W +GS S FTL GHD V + ++ GG YL+S DD+ +++WD NK ++TLE H
Sbjct: 169 VWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+ ++FH P ++TGS D TV++W
Sbjct: 229 AQNVSCVNFHPELPIIITGSEDGTVRIW 256
Score = 269 (99.8 bits), Expect = 7.5e-21, P = 7.5e-21
Identities = 69/270 (25%), Positives = 126/270 (46%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HP M + + ++ +W++ET + V+ F ++
Sbjct: 14 RSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVARKNWVI 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY- 223
+ + DM +++++ +T + + + H + +A P ++L++S D IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWS 133
Query: 224 CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C + GH +V QI ++P D AS S D T +VW L + L GHD V C+ +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G YL +G+ D+ +K+WD + + + TL GH V V F
Sbjct: 194 YSG----------------GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
HP +++ +D T+R+W ++ R TL
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Score = 218 (81.8 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 49/191 (25%), Positives = 90/191 (47%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + + HP + + S+D I+LWD+E + GH V I + +
Sbjct: 98 HSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
S S D ++K+W + + T++GHD V + + D +++S + D+ +K+W+
Sbjct: 158 FASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V + P+ ++ + S D T R+W +T ++ L V CV
Sbjct: 218 NKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 281 AWAPGVASESI 291
+ G S ++
Sbjct: 278 SGLRGSNSVAL 288
Score = 175 (66.7 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 42/136 (30%), Positives = 68/136 (50%)
Query: 104 GHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK- 161
GH V++++ +P + AS S D TI++W + L GH V I + G
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDK 199
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
L+S + D +K+WD C++T++GH NV+ V F P +++ S D T+++W +
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSS 259
Query: 221 TGYCVKTLT-G-HREW 234
T TL G R W
Sbjct: 260 TYRLESTLNYGMERVW 275
Score = 159 (61.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 55/227 (24%), Positives = 94/227 (41%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ + V V P+ ++L++ + ++ +W T VKT VR K
Sbjct: 9 RKLTARSDRVKSVDLHPSEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRASKFVAR 68
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
+ + ++D RV++ T E H + C+A P
Sbjct: 69 KNWVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP------------------T 110
Query: 304 XXYLATGSRDKTIKLWD---VGSGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359
Y+ T S D IKLWD S S +F GH ++V + +P S D+T++
Sbjct: 111 QPYILTSSDDMLIKLWDWEKKWSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
VW + TLE H V +D++ PY+++G+ D+ VK+W+
Sbjct: 169 VWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 56 (24.8 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ +P G+++V CGD + + ++ RN K+ + FV + H + Y + S
Sbjct: 358 IQHNPNGRFVVVCGDGEYI-IYTAMALRN-KSFGSAQEFVWA---HDSSEYAIRES-SSV 411
Query: 400 VKVWE 404
VK+++
Sbjct: 412 VKIFK 416
>UNIPROTKB|F1PZB0 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AAEX03008082
Ensembl:ENSCAFT00000005189 Uniprot:F1PZB0
Length = 537
Score = 295 (108.9 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 84/309 (27%), Positives = 131/309 (42%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P ++A+ +LW L GH +V I F
Sbjct: 244 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 303
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
DQ L SC+AD S+KLW + + + + ++GH V V + P+ F+ + D++ +
Sbjct: 304 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 363
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH V I DG+L + D RVW L T L GH
Sbjct: 364 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 423
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ + ++P ++ATGS D T K+WD+ ++T+ H N
Sbjct: 424 EIYGINFSPN------------------GYHIATGSGDNTCKVWDLRQRRCVYTIPAHQN 465
Query: 336 WVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V GV F P G +L++ D T ++W +KTL H V LD + T
Sbjct: 466 LVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATC 525
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 526 SYDRTFKLW 534
Score = 268 (99.4 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 62/175 (35%), Positives = 90/175 (51%)
Query: 87 RSPTEWIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
RS W A E+ GH V + FH SL + DA R+WD TG L
Sbjct: 360 RSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 419
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDF 204
GHL + I F +G + + S D + K+WD+ +C+ T+ H + VTGV F P + +F
Sbjct: 420 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 479
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+L+ + D T K+W +KTL GH V + +S DG L+A+CS D T ++W
Sbjct: 480 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 534
Score = 249 (92.7 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHP--VFSL------MASCSEDATIRLWDYETGEYER 142
W +P L GH + V ++FHP SL +ASC+ D +++LW ++ E
Sbjct: 273 WSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 332
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH V + + SG+ L + D S +LWD+ + + +GH V +AF +
Sbjct: 333 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 392
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ D ++W++ TG C+ L GH + + I SP+G +A+ S D+T +VW L
Sbjct: 393 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 452
Query: 263 TKETKAELRGHDHTVECVAWAP 284
+ + H + V V + P
Sbjct: 453 QRRCVYTIPAHQNLVTGVKFEP 474
Score = 221 (82.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 66/227 (29%), Positives = 96/227 (42%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL- 246
G D ++ F PNS + +A K+W V + TL GH V I P T+
Sbjct: 244 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 303
Query: 247 -------LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
LASC+ D + ++WSL + E A++ GH V V W P
Sbjct: 304 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPS-------------- 349
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
+L T D++ +LWD+ + + GH V + FH G + G D R
Sbjct: 350 ----GRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGR 405
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
VWD R + LE H + ++F ++ TGS D T KVW+ R
Sbjct: 406 VWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 452
>UNIPROTKB|I3LDL8 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:FP339611
ProteinModelPortal:I3LDL8 Ensembl:ENSSSCT00000032454 Uniprot:I3LDL8
Length = 539
Score = 295 (108.9 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 84/309 (27%), Positives = 131/309 (42%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P ++A+ +LW L GH +V I F
Sbjct: 246 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 305
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
DQ L SC+AD S+KLW + + + + ++GH V V + P+ F+ + D++ +
Sbjct: 306 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 365
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH V I DG+L + D RVW L T L GH
Sbjct: 366 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 425
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ + ++P ++ATGS D T K+WD+ ++T+ H N
Sbjct: 426 EIYGINFSPN------------------GYHIATGSGDNTCKVWDLRQRRCVYTIPAHQN 467
Query: 336 WVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V GV F P G +L++ D T ++W +KTL H V LD + T
Sbjct: 468 LVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATC 527
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 528 SYDRTFKLW 536
Score = 268 (99.4 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 62/175 (35%), Positives = 90/175 (51%)
Query: 87 RSPTEWIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
RS W A E+ GH V + FH SL + DA R+WD TG L
Sbjct: 362 RSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 421
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDF 204
GHL + I F +G + + S D + K+WD+ +C+ T+ H + VTGV F P + +F
Sbjct: 422 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 481
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+L+ + D T K+W +KTL GH V + +S DG L+A+CS D T ++W
Sbjct: 482 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 536
Score = 249 (92.7 bits), Expect = 8.4e-19, P = 8.4e-19
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHP--VFSL------MASCSEDATIRLWDYETGEYER 142
W +P L GH + V ++FHP SL +ASC+ D +++LW ++ E
Sbjct: 275 WSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 334
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH V + + SG+ L + D S +LWD+ + + +GH V +AF +
Sbjct: 335 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 394
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ D ++W++ TG C+ L GH + + I SP+G +A+ S D+T +VW L
Sbjct: 395 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 454
Query: 263 TKETKAELRGHDHTVECVAWAP 284
+ + H + V V + P
Sbjct: 455 QRRCVYTIPAHQNLVTGVKFEP 476
Score = 221 (82.9 bits), Expect = 1.7e-15, P = 1.7e-15
Identities = 66/227 (29%), Positives = 96/227 (42%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL- 246
G D ++ F PNS + +A K+W V + TL GH V I P T+
Sbjct: 246 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 305
Query: 247 -------LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
LASC+ D + ++WSL + E A++ GH V V W P
Sbjct: 306 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPS-------------- 351
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
+L T D++ +LWD+ + + GH V + FH G + G D R
Sbjct: 352 ----GRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGR 407
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
VWD R + LE H + ++F ++ TGS D T KVW+ R
Sbjct: 408 VWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 454
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 80/267 (29%), Positives = 129/267 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V+++ ++ S++ S S D T+ +WD ETGE + L GH V + G
Sbjct: 132 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP 191
Query: 162 LLVSC-SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
LV S D ++KLWD+ ++T Q + + V V F SD ++S D IK+W++
Sbjct: 192 QLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 250
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-RGHDHT 276
T+ GH + V + +S +G+ L S + D+T R+W + A KE ++ +G+ H
Sbjct: 251 QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHN 310
Query: 277 VE-----CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
E C +W+P + +A GS D+ + +WD S +L+ L
Sbjct: 311 FEKNLLRC-SWSPDGSK------------------IAGGSADRFVYVWDTTSRRILYKLP 351
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTL 358
GH V + FHP ++S DK L
Sbjct: 352 GHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 162 (62.1 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 40/102 (39%), Positives = 54/102 (52%)
Query: 307 LATGSRDKTIKLWDV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
LA+ D+ I LW+V G TL GH V + ++ G L S DKT+ VWD+
Sbjct: 108 LASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSET 167
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406
+K L+ H+ FV S R P +V TGS D TVK+W+ R
Sbjct: 168 GERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR 209
Score = 154 (59.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 31/100 (31%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+KLWD+ + + T + V VTF+ ++S G D ++VWD
Sbjct: 194 VCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ T+ H+ VT L Y+++ ++D TV++W+ R
Sbjct: 253 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVR 292
Score = 147 (56.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 31/101 (30%), Positives = 56/101 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG-DDKTLRVWDTAN 365
L + S DKT+ +WD +G + L GH ++V G LV G DD T+++WD
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 210
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K ++T + +++ V ++ F+ +++G +D +KVW+ R
Sbjct: 211 KAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLR 250
Score = 145 (56.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 41/141 (29%), Positives = 66/141 (46%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC--LKTMQGHDHNVTGVAFLPN 201
L GH V F G L S D + LW++ C T++GH V + + +
Sbjct: 89 LSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYG-DCDNYATLKGHSGAVMELHYNTD 147
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWS 260
+ SAS DKT+ +W+ TG VK L GH +V + G L+ + S+D T ++W
Sbjct: 148 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 207
Query: 261 LATKETKAELRGHDHTVECVA 281
+ KA ++ +T + +A
Sbjct: 208 I---RKKAAVQTFQNTYQVLA 225
Score = 130 (50.8 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 32/106 (30%), Positives = 53/106 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTA-- 364
+ +G D IK+WD+ L +T+ GH + V G++ G YL+S D T+R+WD
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPF 294
Query: 365 --NKRNMKTLEAHSH-FVTSL---DFHRAHPYVVTGSVDKTVKVWE 404
+R +K + + H F +L + + GS D+ V VW+
Sbjct: 295 APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWD 340
Score = 124 (48.7 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERAL---HGHLDSVQD-- 153
+ + GH V + S + S + D T+R+WD ER + G++ + +
Sbjct: 256 YTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNL 315
Query: 154 --IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
++ G + SAD + +WD ++ + L + GH +V +AF P +LSAS D
Sbjct: 316 LRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSD 375
Query: 212 KTIKMWEV 219
K + M E+
Sbjct: 376 KRLYMGEI 383
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-ANKRNMKTLEAHSHFVTSLDFH 385
+ L GH+ V FHP G L S G D+ + +W+ + N TL+ HS V L ++
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYN 145
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + S DKTV VW+
Sbjct: 146 TDGSMLFSASTDKTVAVWD 164
Score = 61 (26.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTV 277
+ L+GH V K P G LAS D +W++ + A L+GH V
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAV 139
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 65/192 (33%), Positives = 96/192 (50%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDYETGE---Y---ERALHGHLDSVQDI 154
L GH V + P L+ S S D T+ W GE Y +++ GH VQD+
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 155 AFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
G +S S D +L+LWD+ T + + GH +V V+ N ++SASRDKT+
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPD--GTLLASCSNDHTARVWSLATKETKAELRG 272
K+W G C+ TLTGH +WV +++SP + + S S D T + W LA A+ G
Sbjct: 133 KVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 273 HDHTVECVAWAP 284
H + C+ +P
Sbjct: 192 HTGYISCITLSP 203
Score = 257 (95.5 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 65/191 (34%), Positives = 100/191 (52%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P+K + GH V V + S S D T+RLWD ETGE + GH V ++
Sbjct: 58 PKK-SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSI 116
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTI 214
++ + +VS S D ++K+W+ + +C+ T+ GH+ V+ V P+ S V+SAS DKT+
Sbjct: 117 AKNLRQIVSASRDKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTV 175
Query: 215 KMWEVATGYCVKT-LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
K W++A Y V GH ++ I +SPDG+L AS D +W L +T L
Sbjct: 176 KSWDLAD-YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAK 234
Query: 274 DHTVECVAWAP 284
V +A++P
Sbjct: 235 AE-VHALAFSP 244
Score = 241 (89.9 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 66/229 (28%), Positives = 106/229 (46%)
Query: 185 TMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATG----YCV--KTLTGHREWVRQ 237
T++GH+ VT +A P + D +LS SRDKT+ W++ G Y + K+ GH V+
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXX 297
+ +S DG S S D T R+W L T ET GH V V+ A +
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ--------- 122
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY--LVSCGDD 355
+ + SRDKT+K+W+ G + TL GH++WV V P + ++S D
Sbjct: 123 ---------IVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWD 172
Query: 356 KTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KT++ WD A+ H+ +++ + + D + +W+
Sbjct: 173 KTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWD 221
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 278 ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
EC+A G ++ +S A + + S DKT+K WD+ S+ IGH ++
Sbjct: 140 ECMATLTG-HNDWVS--AVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYI 196
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397
+T P G S G D + +WD + + TLEA + V +L F + Y + +
Sbjct: 197 SCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFS-PNRYWLAAATT 254
Query: 398 KTVKVWE 404
+K+++
Sbjct: 255 SGIKIFK 261
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 46/173 (26%), Positives = 70/173 (40%)
Query: 102 LSGHRSPVIKVIFHPV--FSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
L+GH V V P S + S S D T++ WD GH + I
Sbjct: 145 LTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPD 204
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW-- 217
G L S D + LWD++ + L T++ V +AF PN + L+A+ IK++
Sbjct: 205 GSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFSPNR-YWLAAATTSGIKIFKL 262
Query: 218 -------EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
E+ + V E + + S DG L + D+ RVW + T
Sbjct: 263 QERSLLDELKPEFAVGATAKDPEAI-SLAWSADGQNLFAGYTDNVIRVWQVMT 314
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 65/192 (33%), Positives = 96/192 (50%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDYETGE---Y---ERALHGHLDSVQDI 154
L GH V + P L+ S S D T+ W GE Y +++ GH VQD+
Sbjct: 13 LEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQDV 72
Query: 155 AFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
G +S S D +L+LWD+ T + + GH +V V+ N ++SASRDKT+
Sbjct: 73 TISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASRDKTV 132
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPD--GTLLASCSNDHTARVWSLATKETKAELRG 272
K+W G C+ TLTGH +WV +++SP + + S S D T + W LA A+ G
Sbjct: 133 KVWNTI-GECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIG 191
Query: 273 HDHTVECVAWAP 284
H + C+ +P
Sbjct: 192 HTGYISCITLSP 203
Score = 257 (95.5 bits), Expect = 4.5e-22, P = 4.5e-22
Identities = 65/191 (34%), Positives = 100/191 (52%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P+K + GH V V + S S D T+RLWD ETGE + GH V ++
Sbjct: 58 PKK-SFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSI 116
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN--SDFVLSASRDKTI 214
++ + +VS S D ++K+W+ + +C+ T+ GH+ V+ V P+ S V+SAS DKT+
Sbjct: 117 AKNLRQIVSASRDKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTV 175
Query: 215 KMWEVATGYCVKT-LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
K W++A Y V GH ++ I +SPDG+L AS D +W L +T L
Sbjct: 176 KSWDLAD-YSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAK 234
Query: 274 DHTVECVAWAP 284
V +A++P
Sbjct: 235 AE-VHALAFSP 244
Score = 241 (89.9 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 66/229 (28%), Positives = 106/229 (46%)
Query: 185 TMQGHDHNVTGVAFLP-NSDFVLSASRDKTIKMWEVATG----YCV--KTLTGHREWVRQ 237
T++GH+ VT +A P + D +LS SRDKT+ W++ G Y + K+ GH V+
Sbjct: 12 TLEGHNGWVTSLATTPAHPDLLLSGSRDKTLIKWKLTGGEDNQYGIPKKSFKGHSHIVQD 71
Query: 238 IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXX 297
+ +S DG S S D T R+W L T ET GH V V+ A +
Sbjct: 72 VTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQ--------- 122
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY--LVSCGDD 355
+ + SRDKT+K+W+ G + TL GH++WV V P + ++S D
Sbjct: 123 ---------IVSASRDKTVKVWNT-IGECMATLTGHNDWVSAVRISPSDQSSTVISASWD 172
Query: 356 KTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KT++ WD A+ H+ +++ + + D + +W+
Sbjct: 173 KTVKSWDLADYSVNADFIGHTGYISCITLSPDGSLCASAGKDGVIILWD 221
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 34/127 (26%), Positives = 59/127 (46%)
Query: 278 ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
EC+A G ++ +S A + + S DKT+K WD+ S+ IGH ++
Sbjct: 140 ECMATLTG-HNDWVS--AVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYI 196
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397
+T P G S G D + +WD + + TLEA + V +L F + Y + +
Sbjct: 197 SCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFS-PNRYWLAAATT 254
Query: 398 KTVKVWE 404
+K+++
Sbjct: 255 SGIKIFK 261
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 46/173 (26%), Positives = 70/173 (40%)
Query: 102 LSGHRSPVIKVIFHPV--FSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
L+GH V V P S + S S D T++ WD GH + I
Sbjct: 145 LTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNADFIGHTGYISCITLSPD 204
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW-- 217
G L S D + LWD++ + L T++ V +AF PN + L+A+ IK++
Sbjct: 205 GSLCASAGKDGVIILWDLNKNKTLYTLEAKAE-VHALAFSPNR-YWLAAATTSGIKIFKL 262
Query: 218 -------EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
E+ + V E + + S DG L + D+ RVW + T
Sbjct: 263 QERSLLDELKPEFAVGATAKDPEAI-SLAWSADGQNLFAGYTDNVIRVWQVMT 314
>MGI|MGI:1917302 [details] [associations]
symbol:Prpf4 "PRP4 pre-mRNA processing factor 4 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000398 "mRNA splicing,
via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030
"Cajal body" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=ISO] [GO:0071001 "U4/U6 snRNP" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 MGI:MGI:1917302 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:AK005464 EMBL:AK089838
EMBL:AK166912 EMBL:AK167216 EMBL:AK169532 EMBL:BC106089
IPI:IPI00458908 RefSeq:NP_081573.1 UniGene:Mm.30660
ProteinModelPortal:Q9DAW6 SMR:Q9DAW6 STRING:Q9DAW6
PhosphoSite:Q9DAW6 PaxDb:Q9DAW6 PRIDE:Q9DAW6
Ensembl:ENSMUST00000084524 GeneID:70052 KEGG:mmu:70052
InParanoid:Q9DAW6 ChiTaRS:PRPF4 NextBio:330897 Bgee:Q9DAW6
CleanEx:MM_PRPF4 Genevestigator:Q9DAW6
GermOnline:ENSMUSG00000066148 Uniprot:Q9DAW6
Length = 521
Score = 294 (108.6 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 84/309 (27%), Positives = 131/309 (42%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P ++A+ +LW L GH +V I F
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
DQ L SC+AD S+KLW + + + + ++GH V V + P+ F+ + D++ +
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 347
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH V I DG+L + D RVW L T L GH
Sbjct: 348 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 407
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ + ++P ++ATGS D T K+WD+ ++T+ H N
Sbjct: 408 EIYGINFSPN------------------GYHIATGSGDNTCKVWDLRQRRCVYTIPAHQN 449
Query: 336 WVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V GV F P G +L++ D T ++W +KTL H V LD + T
Sbjct: 450 LVTGVKFEPIHGDFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATC 509
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 510 SYDRTFKLW 518
Score = 273 (101.2 bits), Expect = 5.1e-22, P = 5.1e-22
Identities = 63/175 (36%), Positives = 90/175 (51%)
Query: 87 RSPTEWIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
RS W A E+ GH V + FH SL + DA R+WD TG L
Sbjct: 344 RSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 403
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDF 204
GHL + I F +G + + S D + K+WD+ +C+ T+ H + VTGV F P + DF
Sbjct: 404 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDF 463
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+L+ + D T K+W +KTL GH V + +S DG L+A+CS D T ++W
Sbjct: 464 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518
Score = 250 (93.1 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHP--VFSL------MASCSEDATIRLWDYETGEYER 142
W +P L GH + V ++FHP SL +ASC+ D +++LW ++ E
Sbjct: 257 WSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAADGSVKLWSLDSDEPVA 316
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH V + + SG+ L + D S +LWD+ + + +GH V +AF +
Sbjct: 317 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 376
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ D ++W++ TG C+ L GH + + I SP+G +A+ S D+T +VW L
Sbjct: 377 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
Query: 263 TKETKAELRGHDHTVECVAWAP 284
+ + H + V V + P
Sbjct: 437 QRRCVYTIPAHQNLVTGVKFEP 458
Score = 221 (82.9 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 66/227 (29%), Positives = 96/227 (42%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTL- 246
G D ++ F PNS + +A K+W V + TL GH V I P T+
Sbjct: 228 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVS 287
Query: 247 -------LASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
LASC+ D + ++WSL + E A++ GH V V W P
Sbjct: 288 LDQKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPS-------------- 333
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
+L T D++ +LWD+ + + GH V + FH G + G D R
Sbjct: 334 ----GRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGR 389
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
VWD R + LE H + ++F ++ TGS D T KVW+ R
Sbjct: 390 VWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 436
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 208 (78.3 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 48/162 (29%), Positives = 83/162 (51%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
G S + I SL+A D +IR+WD E G E + H +V + +++ G +L
Sbjct: 62 GGPSLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D + LWD+ L ++GH VT + FL ++S+S+DK +++W++ T +
Sbjct: 122 ASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQH 181
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
C++ ++GH V + P+ + + S D R + A KE
Sbjct: 182 CMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY--AVKE 221
Score = 198 (74.8 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 66/214 (30%), Positives = 95/214 (44%)
Query: 194 TGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
+ +A+ +VL+ + +K + +W V G C KTLT S G LA
Sbjct: 22 SNIAYDSTGKYVLAPALEK-VGIWHVRQGVCSKTLTPSS--------SRGGPSLA----- 67
Query: 254 HTARVWSLATKETKAELRGH-DHTVECVAWAPGVASESISE---AAXXXXXXXXXXYLAT 309
V S+A+ + G+ D ++ G + + A LA+
Sbjct: 68 ----VTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLAS 123
Query: 310 GSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM 369
GS+D I LWDV S LF L GH + V + F GGK LVS DK LRVWD + M
Sbjct: 124 GSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCM 183
Query: 370 KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + H V S+D YVVTGS D+ ++ +
Sbjct: 184 QIVSGHHSEVWSVDTDPEERYVVTGSADQELRFY 217
Score = 192 (72.6 bits), Expect = 8.5e-12, P = 8.5e-12
Identities = 46/170 (27%), Positives = 87/170 (51%)
Query: 95 RAPEKFALSGHRS-----PVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD 149
+A +K +S +S V+ V P +A D+T++++ ++ ++ +L+GH
Sbjct: 524 KATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKL 583
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
V I G+L+V+ S D +LK+W + C K++ H +V GV F+ N+ ++ S
Sbjct: 584 PVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIG 643
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+D+ +K W+ + TL GH + + +S G L + S+D + R W
Sbjct: 644 KDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 191 (72.3 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 42/119 (35%), Positives = 66/119 (55%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSG 160
+ H+ V + ++ V S++AS S+D I LWD E+G + L GH D V D+ F G
Sbjct: 103 NSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFR--LRGHRDQVTDLVFLDGG 160
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
K LVS S D L++WD+ T C++ + GH V V P +V++ S D+ ++ + V
Sbjct: 161 KKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
Score = 186 (70.5 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 55/259 (21%), Positives = 111/259 (42%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH V+ + + LL+S S +K+W+ ST CL+T+ + + + +P + +
Sbjct: 404 GHRSDVRSVTLSEDNTLLMSTSHS-EVKIWNPSTGSCLRTIDS-GYGLCSL-IVPQNKYG 460
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ ++ +++ ++ + V+ + H + I P+ + + S DH + W K+
Sbjct: 461 IVGTKSGVLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQ 520
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
K+ TV V S +++ ++A D T+K++ + S
Sbjct: 521 -KSGKATKKLTVS------NVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLK 573
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
+L GH V + G+ +V+ DK L++W K++ AH V + F
Sbjct: 574 FYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFV 633
Query: 386 RAHPYVVTGSVDKTVKVWE 404
R Y+ + D+ VK W+
Sbjct: 634 RNTHYLFSIGKDRLVKYWD 652
Score = 174 (66.3 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 34/122 (27%), Positives = 66/122 (54%)
Query: 99 KFALS--GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
KF LS GH+ PV+ + L+ + S+D +++W + G+ +++ H DSV + F
Sbjct: 573 KFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKF 632
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
++ L S D +K WD ++ L T++GH + +A DF+++ S D++++
Sbjct: 633 VRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRR 692
Query: 217 WE 218
W+
Sbjct: 693 WD 694
Score = 158 (60.7 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS+DK +K+W + G ++ H + V GV F YL S G D+ ++ WD
Sbjct: 597 IVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKF 656
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ TLE H + L ++VTGS D++++ W+
Sbjct: 657 EHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 142 (55.0 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 40/135 (29%), Positives = 56/135 (41%)
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
+V IA S + V AD S+++WD C H VT + + + S S
Sbjct: 67 AVTSIASSASSLVAVGY-ADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGS 125
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
+D I +W+V + L GHR+ V + G L S S D RVW L T+
Sbjct: 126 KDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQI 185
Query: 270 LRGHDHTVECVAWAP 284
+ GH V V P
Sbjct: 186 VSGHHSEVWSVDTDP 200
Score = 133 (51.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/191 (20%), Positives = 81/191 (42%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE----TGEYERALH-GHL------DS 150
+ H + + P S + S D ++ W+Y+ +G+ + L ++ D
Sbjct: 483 VKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDD 542
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V +A K + D ++K++ M + + ++ GH V + + + +++ S+
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
DK +K+W + G C K++ H + V +K + L S D + W E L
Sbjct: 603 DKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTL 662
Query: 271 RGHDHTVECVA 281
GH + C+A
Sbjct: 663 EGHHAEIWCLA 673
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 28/110 (25%), Positives = 45/110 (40%)
Query: 295 AXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD 354
A +A G D +I++WD G+ H V + ++ G L S
Sbjct: 67 AVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSK 126
Query: 355 DKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
D + +WD + + L H VT L F +V+ S DK ++VW+
Sbjct: 127 DNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWD 176
Score = 114 (45.2 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 41/176 (23%), Positives = 76/176 (43%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F L GHR V ++F + S S+D +R+WD ET + + GH V + D
Sbjct: 142 FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPE 201
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
+ +V+ SAD L+ + + Y ++ N++ + ++ T WE+
Sbjct: 202 ERYVVTGSADQELRFYAVKEYSSNGSLVSDS----------NANEIKASEEHSTENKWEI 251
Query: 220 ATGYC-VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAELR 271
+ ++ T R V +++ + G LLA T ++ + A + KA+ R
Sbjct: 252 LKLFGEIQRQTKDR--VARVRFNVSGKLLACQMAGKTIEIFRVLDEAEAKQKAKRR 305
Score = 87 (35.7 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL + +D+ +K WD L TL GH + + G +LV+ D+++R WD +
Sbjct: 638 YLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSE 697
Query: 366 K 366
+
Sbjct: 698 E 698
Score = 81 (33.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 20/73 (27%), Positives = 41/73 (56%)
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTM----QGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G L +S + + SL+ + + + + KT+ QGH +V V ++ ++S S + +K
Sbjct: 373 GTLALSLNNN-SLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLSEDNTLLMSTSHSE-VK 430
Query: 216 MWEVATGYCVKTL 228
+W +TG C++T+
Sbjct: 431 IWNPSTGSCLRTI 443
Score = 40 (19.1 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
Y+ TGS D+ ++ + V S +L+ N
Sbjct: 204 YVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 290 (107.1 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 82/323 (25%), Positives = 137/323 (42%)
Query: 91 EWIPRAPEKFALSGHRSPVIKVIFHPVFSL----MASCSEDATIRLWDYETGEYERALHG 146
EWI + K P ++H FS +ASC D T++++ ETGE +
Sbjct: 596 EWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA 655
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
H D V AF + +CS D +K+WD T + + T + H V F S+ +L
Sbjct: 656 HEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLL 715
Query: 207 SA--SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
A S D +K+W++ C T+ GH V + SPD LLASCS D T ++W + +
Sbjct: 716 LATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSA 775
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSG 324
K + V+ + E + + +++K + L D+ +
Sbjct: 776 NEKKSIN-----VKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLL-DIHTS 829
Query: 325 SLLFTL-IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLD 383
LL + GH + ++ F P V + +W+ ++ + H +V +
Sbjct: 830 GLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVM 889
Query: 384 FHRAHPYVVTGSVDKTVKVWECR 406
F +T S D+T++VWE R
Sbjct: 890 FSPDGSSFLTASDDQTIRVWETR 912
Score = 227 (85.0 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 70/256 (27%), Positives = 109/256 (42%)
Query: 116 PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW 175
P +A E+ I++ + + GH +V+ I F GK L+S S D +++W
Sbjct: 971 PHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030
Query: 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV 235
+ T + + +Q H V L +S +LS S D T+K+W V TG + T H+ V
Sbjct: 1031 NWQTEEYV-FLQAHQETVKDFRLLRDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTV 1088
Query: 236 RQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAA 295
+S D T +S S D TA++WS EL+GH+ V C A++ + I A
Sbjct: 1089 LSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFS----LDGILLAT 1144
Query: 296 XXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDD 355
++ G + G+ H WV V F P K LVS G
Sbjct: 1145 GDDNGEIRIWNVSDGQLLHLCAPISIEEGTAT-----HGGWVTDVCFSPDRKMLVSAGG- 1198
Query: 356 KTLRVWDTANKRNMKT 371
L+ W+ + +T
Sbjct: 1199 -YLKWWNVVTGESSQT 1213
Score = 189 (71.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 48/159 (30%), Positives = 80/159 (50%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH+ V + F + S SED+ I++W+++T EY L H ++V+D + +LL
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYV-FLQAHQETVKDFRLLRDSRLL 1059
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
S S D ++K+W++ T + + H V A ++ S S DKT K+W
Sbjct: 1060 -SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPS 1118
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ L GH VR S DG LLA+ ++ R+W+++
Sbjct: 1119 PLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157
Score = 129 (50.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 41/148 (27%), Positives = 67/148 (45%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H+ V+ + +S S D T ++W +E L GH V+ AF G LL
Sbjct: 1084 HQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLA 1143
Query: 165 SCSADMSLKLWDMSTYQ----C--LKTMQG---HDHNVTGVAFLPNSDFVLSASRDKTIK 215
+ + +++W++S Q C + +G H VT V F P+ ++SA +K
Sbjct: 1144 TGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAGG--YLK 1201
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPD 243
W V TG +T + +++I VSPD
Sbjct: 1202 WWNVVTGESSQTFYTNGTNLKKIHVSPD 1229
Score = 40 (19.1 bits), Expect = 1.9e-25, Sum P(2) = 1.9e-25
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 15 VADYLLSNGYLSALE 29
+ D+++SNG L+ +E
Sbjct: 25 IMDHMISNGVLTVVE 39
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 295 (108.9 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 74/246 (30%), Positives = 114/246 (46%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 293 TLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAH 351
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N F S S D I + + VKT GH V I
Sbjct: 352 TGEAKQQFPFHSAPALDVDWQNNMTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 410
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAXX 297
K P G LLASCS+D T ++WS+ + +L+ H+ + + W+P G A+ + +
Sbjct: 411 KWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNS---- 466
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
LA+ S D T++LWD+ G TL H V V F P G+YL S DK
Sbjct: 467 ------NIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKC 520
Query: 358 LRVWDT 363
+ +W+T
Sbjct: 521 VHIWNT 526
Score = 268 (99.4 bits), Expect = 3.6e-21, P = 3.6e-21
Identities = 66/187 (35%), Positives = 92/187 (49%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H +P + V + + ASCS D I + + GH + V I +D SG LL
Sbjct: 362 HSAPALDVDWQNNMTF-ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLA 420
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNV-------TGVAFL-PNSDFVL-SASRDKTIK 215
SCS DM+LK+W M C+ +Q H+ + TG A PNS+ +L SAS D T++
Sbjct: 421 SCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 480
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ G C TLT H+E V + SPDG LAS S D +W+ + RG
Sbjct: 481 LWDIERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYRGTGG 540
Query: 276 TVECVAW 282
E V W
Sbjct: 541 IFE-VCW 546
Score = 221 (82.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 84/325 (25%), Positives = 130/325 (40%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET----GEYERAL-H-----GH-LDS 150
L GH S V ++PV L+AS S D+T R+W+ G + L H GH + S
Sbjct: 220 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 279
Query: 151 VQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+D+ ++ +G LL + S D ++W T+ H + + + +++LS
Sbjct: 280 NKDVTSLDWNTNGTLLATGSYDGFARIWTEDG-NLASTLGQHKGPIFALKWNRKGNYILS 338
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
A DKT +W+ TG + H + + T ASCS D V L
Sbjct: 339 AGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTF-ASCSTDMCIHVCRLGCDRPV 397
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLL 327
+GH + V + W P LA+ S D T+K+W + +
Sbjct: 398 KTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSMKQEVCI 439
Query: 328 FTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
L H+ + + + P G L S D T+R+WD TL H
Sbjct: 440 HDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEP 499
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVW 403
V S+ F Y+ +GS DK V +W
Sbjct: 500 VYSVAFSPDGRYLASGSFDKCVHIW 524
Score = 218 (81.8 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 61/234 (26%), Positives = 107/234 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L H+ P+ + ++ + + S D T +WD TGE ++ H D+ + Q+
Sbjct: 317 LGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNM 375
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
SCS DM + + + + +KT QGH + V + + P+ + S S D T+K+W +
Sbjct: 376 TFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQ 435
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
C+ L H + + IK SP G + SN ++ + + A+ D TV
Sbjct: 436 EVCIHDLQAHNKEIYTIKWSPTGP---ATSNPNSNIMLASAS---------FDSTVRLWD 483
Query: 282 WAPGVASESIS---EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
GV + +++ E YLA+GS DK + +W+ SG+L+ + G
Sbjct: 484 IERGVCTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQSGNLVHSYRG 537
Score = 136 (52.9 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 63/276 (22%), Positives = 107/276 (38%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH V A++ LL S S D + ++W+++ + G + +
Sbjct: 220 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLN-----ENSNGGSTQLVLRHCIREGG 274
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA- 262
+ +++D T W G + T G + +I DG L AS H +++L
Sbjct: 275 HDVPSNKDVTSLDWNT-NGTLLAT--GSYDGFARIWTE-DGNL-ASTLGQHKGPIFALKW 329
Query: 263 -TKETKAELRGHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSRDKTIK 317
K G D T + W G A + A A+ S D I
Sbjct: 330 NRKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIH 387
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
+ +G + T GH N V + + P G L SC DD TL++W + + L+AH+
Sbjct: 388 VCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNK 447
Query: 378 FVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+ ++ + P + + S D TV++W+
Sbjct: 448 EIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWD 483
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 293 (108.2 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 74/245 (30%), Positives = 111/245 (45%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
+L+A+ S D R+W E G L H + + +++ G ++S D + +WD
Sbjct: 244 TLLATGSYDGFARIWT-ENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAH 302
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T + + H V + N+ F S S D I + + VKT GH V I
Sbjct: 303 TGEAKQQFPFHSAPALDVDWQNNTTFA-SCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAI 361
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
K P G LLASCS+D T ++WS+ L+ H + + W+P + S ++
Sbjct: 362 KWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIM- 420
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
LA+ S D T++LWD+ G TL H V V F P GKYL S DK +
Sbjct: 421 --------LASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGSFDKCV 472
Query: 359 RVWDT 363
+W+T
Sbjct: 473 HIWNT 477
Score = 254 (94.5 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 71/250 (28%), Positives = 110/250 (44%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
W L H+ P+ + ++ + + S D T +WD TGE ++ H
Sbjct: 258 WTENGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPA 317
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
D+ + Q+ SCS DM + + + + +KT QGH + V + + P+ + S S D
Sbjct: 318 LDVDW-QNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDD 376
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT---------LLASCSNDHTARVWSLA 262
T+K+W + CV L HR+ + IK SP G +LAS S D T R+W +
Sbjct: 377 MTLKIWSMKQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDME 436
Query: 263 TKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVG 322
LR H V VA++P YLA+GS DK + +W+
Sbjct: 437 QGVCTHTLRKHQEPVYSVAFSPD------------------GKYLASGSFDKCVHIWNTQ 478
Query: 323 SGSLLFTLIG 332
SGSL+ + G
Sbjct: 479 SGSLVHSYQG 488
Score = 230 (86.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 87/331 (26%), Positives = 133/331 (40%)
Query: 97 PEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDY-ETGEY---ERAL-H----- 145
P K L GH S V ++PV L+AS S D+T R+W+ E G + L H
Sbjct: 165 PNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREG 224
Query: 146 GH-LDSVQDIA---FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
GH + S +D+ ++ G LL + S D ++W + T+ H + + +
Sbjct: 225 GHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTENG-NLASTLGQHKGPIFALKWNKK 283
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+++LSA DKT +W+ TG + H + + T ASCS D V L
Sbjct: 284 GNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRL 342
Query: 262 ATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
+GH + V + W P LA+ S D T+K+W +
Sbjct: 343 GCDRPVKTFQGHTNEVNAIKWDPS------------------GMLLASCSDDMTLKIWSM 384
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGK---------YLVSCGDDKTLRVWDTANKRNMKTL 372
+ + L H + + + P G L S D T+R+WD TL
Sbjct: 385 KQDACVHNLQAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTL 444
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
H V S+ F Y+ +GS DK V +W
Sbjct: 445 RKHQEPVYSVAFSPDGKYLASGSFDKCVHIW 475
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 69/281 (24%), Positives = 108/281 (38%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ---GHDHNVTGVAFLP 200
L GH V A++ LL S S D + ++W+++ + Q H G
Sbjct: 171 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENGSRASTQLVLRHCIREGGHDVPS 230
Query: 201 NSDFV-LSASRDKTIKMWEVATGYCVKTLTGH-REWVRQIKVSPDGTLLASCSNDHTARV 258
N D L + D T+ +ATG + G R W +G L AS H +
Sbjct: 231 NKDVTSLDWNSDGTL----LATG----SYDGFARIWTE------NGNL-ASTLGQHKGPI 275
Query: 259 WSLA-TKETKAELR-GHDHTVECVAWAP--GVASESIS--EAAXXXXXXXXXXYLATGSR 312
++L K+ L G D T + W G A + A A+ S
Sbjct: 276 FALKWNKKGNYILSAGVDKTT--IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCST 333
Query: 313 DKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
D I + +G + T GH N V + + P G L SC DD TL++W + L
Sbjct: 334 DMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNL 393
Query: 373 EAHSHFVTSLDFHRAHP---------YVVTGSVDKTVKVWE 404
+AH + ++ + P + + S D TV++W+
Sbjct: 394 QAHRKEIYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWD 434
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 79/269 (29%), Positives = 132/269 (49%)
Query: 98 EKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
E +A L GH V+++ ++ SL+ S S D T+ +WD ETGE + L GH V
Sbjct: 90 ENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFP 149
Query: 157 DQSG-KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
+ G +L + S D ++KLWD+ + T Q + + V V F SD ++S D IK
Sbjct: 150 ARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIK 208
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL---ATKETKAEL-R 271
+W++ + ++ GH + V + +S DG+ L S S D++ RVW + A KE ++ +
Sbjct: 209 VWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQ 268
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
G+ H E +++ + +A GS D+ + +WD + +++ L
Sbjct: 269 GNVHNFE----------KNLLRCSWSADGSK----IAAGSADRFVYIWDTTTRRIVYKLP 314
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRV 360
GH V V FHP ++S DK L +
Sbjct: 315 GHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
Score = 245 (91.3 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 79/314 (25%), Positives = 137/314 (43%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAFDQSG 160
LSGH V FHP + +AS D I +W+ Y E L GH +V ++ ++ G
Sbjct: 52 LSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDG 111
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV-AFLPNSDFVLSASRDKTIKMWEV 219
LL S S D ++ +WD T + +K ++GH V + S D T+K+W++
Sbjct: 112 SLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDI 171
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
V T + V + + + S D+ +VW L + ++GH +V
Sbjct: 172 RKKASVHTFQNTYQ-VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVT- 229
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS------LLFTLIGH 333
G+ S+S YL + S D ++++WD+ + +F H
Sbjct: 230 -----GL---SLS---------ADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVH 272
Query: 334 D---NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
+ N +R ++ G + + D+ + +WDT +R + L H+ V + FH P
Sbjct: 273 NFEKNLLR-CSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPI 331
Query: 391 VVTGSVDKTVKVWE 404
V++GS DK + + E
Sbjct: 332 VLSGSSDKRLYIGE 345
Score = 198 (74.8 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 53/206 (25%), Positives = 99/206 (48%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASC--SEDATIRLWDYETGEYERALHGHL 148
W E+ L GH S + F +C S+D T++LWD + ++H
Sbjct: 126 WDSETGERVKRLKGHTS-FVNSCFPARRGPQLACTGSDDGTVKLWDIRK---KASVHTFQ 181
Query: 149 DSVQ--DIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL 206
++ Q + F+ + ++S D +K+WD+ + + +MQGH +VTG++ + ++L
Sbjct: 182 NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLL 241
Query: 207 SASRDKTIKMWEVAT----GYCVKTLTGH-REWVRQI---KVSPDGTLLASCSNDHTARV 258
S S D ++++W++ CVK G+ + + + S DG+ +A+ S D +
Sbjct: 242 SNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYI 301
Query: 259 WSLATKETKAELRGHDHTVECVAWAP 284
W T+ +L GH +V VA+ P
Sbjct: 302 WDTTTRRIVYKLPGHAGSVNEVAFHP 327
Score = 155 (59.6 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 38/102 (37%), Positives = 53/102 (51%)
Query: 307 LATGSRDKTIKLWDV-GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
LA+ D+ I +W+V G TL GH V + ++ G L S DKT+ VWD+
Sbjct: 71 LASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSET 130
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWECR 406
+K L+ H+ FV S R P + TGS D TVK+W+ R
Sbjct: 131 GERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIR 172
Score = 152 (58.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRN 368
TGS D T+KLWD+ + + T + V VTF+ ++S G D ++VWD +
Sbjct: 159 TGSDDGTVKLWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKL 217
Query: 369 MKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +++ H VT L Y+++ S+D +V+VW+ R
Sbjct: 218 IYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIR 255
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 34/128 (26%), Positives = 61/128 (47%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYET-GEYERAL---HGHLDSVQD-- 153
+++ GH V + S + S S D ++R+WD ER + G++ + +
Sbjct: 219 YSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNL 278
Query: 154 --IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
++ G + + SAD + +WD +T + + + GH +V VAF P VLS S D
Sbjct: 279 LRCSWSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSD 338
Query: 212 KTIKMWEV 219
K + + E+
Sbjct: 339 KRLYIGEI 346
Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT-ANKRNMKTLEAHSHFVTSLDFH 385
+ L GH+ V FHP G L S G D+ + +W+ + N TL+ HS V L ++
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYN 108
Query: 386 RAHPYVVTGSVDKTVKVWE 404
+ + S DKTV VW+
Sbjct: 109 TDGSLLFSASTDKTVCVWD 127
Score = 69 (29.3 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL-ATKETKAELRGHDHTV 277
+ L+GH V K P+G LAS D +W++ E A L+GH V
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAV 102
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 223 (83.6 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 45/162 (27%), Positives = 85/162 (52%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++D+ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V T C+ T H++ V +K + +G+ + S +D V+
Sbjct: 260 DVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 211 (79.3 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
F P +A+ + + ++ E+G+ E +L + IA+ GK L S + D +
Sbjct: 114 FSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
++D++T + L T++GH + + F P+S +++AS D IK+++V TL+GH
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + PD T S S+D + +VW + T+
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Score = 198 (74.8 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 49/187 (26%), Positives = 94/187 (50%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFD 157
+++L GH+ V+ V + AS S DA IRLWD E G+ +++ G +D+ +AF
Sbjct: 57 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDA-WTLAFS 115
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+ L + + + ++ + + + ++ + +A+ P+ ++ S + D I ++
Sbjct: 116 PDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
++ATG + TL GH +R + SPD LL + S+D +++ + L GH V
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 278 ECVAWAP 284
VA+ P
Sbjct: 236 LNVAFCP 242
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/99 (36%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+G+ D I ++D+ +G LL TL GH +R +TF P + LV+ DD ++++D +
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H+ +V ++ F + V+ S DK+VKVW+
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 176 (67.0 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I+++D + L GH V ++AF
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+ T C+ T H V GV + N ++S D+ I +++
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 151 (58.2 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 38/162 (23%), Positives = 78/162 (48%)
Query: 125 SEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182
S D +++W + E E + +L GH V + + + S S D ++LWD+ +
Sbjct: 39 SLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
+K++ + +AF P+S ++ + + + ++ V +G +L +++ I SP
Sbjct: 99 MKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
DG LAS + D ++ +AT + L GH + + ++P
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Score = 149 (57.5 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV +L TL GH +WV V F P + VS DK+++VWD +
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + ++ +V+ D+ + V++C
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYDC 303
Score = 141 (54.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 58/232 (25%), Positives = 100/232 (43%)
Query: 180 YQCL-KTMQGHDHNVTGVAFLPNS----DFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234
Y L K Q HD + VA+ N + V++ S D +K+W+ R+
Sbjct: 5 YSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWK------------WRDE 52
Query: 235 VRQIKVSPDGTLLASCSND--HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292
+++ S +G L S D HT + A+ A +R D +E + + +
Sbjct: 53 RLELQWSLEGHQLGVVSVDISHTLPI--AASSSLDAHIRLWD--LENGKQMKSIDAGPVD 108
Query: 293 EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC 352
A YLATG+ + ++ V SG ++L ++ + + P GKYL S
Sbjct: 109 --AWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 353 GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
D + ++D A + + TLE H+ + SL F +VT S D +K+++
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 122 (48.0 bits), Expect = 3.9e-25, Sum P(2) = 3.9e-25
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDVG+ + + T H + V GV ++ G +VS GDD+ + V+D
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 50/159 (31%), Positives = 87/159 (54%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV--QDIAFDQSGKLLVSC 166
V+ V + P L+A D T++++ +T ++ +L+GH V DI+ D G L+ +
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHD--GALIATG 609
Query: 167 SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK 226
SAD ++K+W + C K++ HD +V + F+P S +A +D IK W+ ++
Sbjct: 610 SADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQ 669
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
TL GH + + + VSP G + S S+D + R+W T+E
Sbjct: 670 TLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE-RTRE 707
Score = 206 (77.6 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 49/172 (28%), Positives = 85/172 (49%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W R EK L G + V + P +A ED +IR++ +GE +GH +
Sbjct: 50 WDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAA 109
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ + +DQ G L S S D + +WD+ L ++GH +T FL + ++++ +
Sbjct: 110 ITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGK 169
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
D +K W++ T +C KT+ GHR V + + + L + ++D RVW +A
Sbjct: 170 DTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDIA 221
Score = 201 (75.8 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 39/122 (31%), Positives = 70/122 (57%)
Query: 99 KFALS--GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
KF LS GH+ PVI + +L+A+ S D +++W + G+ ++L H DSV + F
Sbjct: 582 KFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQF 641
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
L + D +K WD ++ ++T++GH + +A P+ D+V+S+S DK++++
Sbjct: 642 VPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRL 701
Query: 217 WE 218
WE
Sbjct: 702 WE 703
Score = 194 (73.4 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 63/244 (25%), Positives = 104/244 (42%)
Query: 130 IRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM-------STYQC 182
++L+D +G + H ++ ++ + V+ AD S+K WD ST +
Sbjct: 478 LQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKR 537
Query: 183 LKTMQGH----DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
L Q D +V V++ PN + + D T+K++ V T +L GH+ V +
Sbjct: 538 LSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICM 597
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG L+A+ S D ++W L + L HD +V + + P
Sbjct: 598 DISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVP-------------- 643
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
T +D IK WD + TL GH + + P G Y+VS DK+L
Sbjct: 644 ----KSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSL 699
Query: 359 RVWD 362
R+W+
Sbjct: 700 RLWE 703
Score = 177 (67.4 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/260 (21%), Positives = 114/260 (43%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH V+ ++F ++S +AD S+K+W+ ST QC++TM ++ + F+P V
Sbjct: 413 GHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMTC-EYALCSF-FVPGDRQV 469
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ ++ ++++++A+G ++T+ H + + +SPD + D + + W
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDF---- 525
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
EL +++ + + + E LA D T+K++ V +
Sbjct: 526 ---ELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLK 582
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF- 384
+L GH V + G + + D+ +++W K+L AH V L F
Sbjct: 583 FFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFV 642
Query: 385 HRAHPYVVTGSVDKTVKVWE 404
++H + G D +K W+
Sbjct: 643 PKSHLFFTAGK-DHKIKQWD 661
Score = 157 (60.3 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D+ +K+W + G +L HD+ V + F P + G D ++ WD
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDHKIKQWDADKF 665
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++TLE H + L + YVV+ S DK++++WE
Sbjct: 666 EHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 148 (57.2 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 38/169 (22%), Positives = 74/169 (43%)
Query: 127 DATIRLWDYETGEYERALHGHL-----------DSVQDIAFDQSGKLLVSCSADMSLKLW 175
D +++ WD+E + E + L + V +++ + KLL D ++K++
Sbjct: 517 DKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIF 576
Query: 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV 235
+ T + ++ GH V + + + + S D+ +K+W + G C K+L H + V
Sbjct: 577 YVDTLKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSV 636
Query: 236 RQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
++ P L + DH + W E L GH + C+A +P
Sbjct: 637 MYLQFVPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSP 685
Score = 131 (51.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS+D I +WDV + S L+ L GH + + F LV+ G D ++ WD +
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQ 181
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KT+ H V L ++TG+ D ++VW+
Sbjct: 182 HCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWD 219
Score = 112 (44.5 bits), Expect = 8.1e-15, Sum P(2) = 8.1e-15
Identities = 33/142 (23%), Positives = 58/142 (40%)
Query: 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
+WD GE L G V + G L D S++++ + + + T GH
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
+T + + + S S+D I +W+V + L GH++ + Q + LL +
Sbjct: 109 AITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSG 168
Query: 252 NDHTARVWSLATKETKAELRGH 273
D + W L T+ + GH
Sbjct: 169 KDTMVKWWDLDTQHCFKTMVGH 190
Score = 108 (43.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 36/172 (20%), Positives = 75/172 (43%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ L GH+ + + +F +L+ + +D ++ WD +T + + GH V +
Sbjct: 143 YRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLLSE 202
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRD--KTIKM 216
K L++ ++D L++WD++ Q ++ + D + G + P L A +T +
Sbjct: 203 EKRLITGASDSELRVWDIAYLQEIEDPEEPDPKKIKGSS--PGIQDTLEAEDGAFETDEA 260
Query: 217 WEVATGYCVKT---LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
E C K + R+ V + V G +LA D ++ + +K+
Sbjct: 261 PEDRILSCRKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLELFCILSKK 312
Score = 97 (39.2 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 25/104 (24%), Positives = 46/104 (44%)
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
+WD+ + + +QG VT + P+ + D +I+++ + +G T GH+
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+ +K G LAS S D VW + + L+GH +
Sbjct: 109 AITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAI 152
Score = 78 (32.5 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT 229
T+ GH +V ++F ++ VLSA+ D +IK+W +T C++T+T
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRSTLQCIRTMT 453
Score = 57 (25.1 bits), Expect = 4.0e-09, Sum P(2) = 4.0e-09
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
T+ GHR VR + S D + S + D + ++W+ +T
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAVLSAAAD-SIKIWNRST 445
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 57/181 (31%), Positives = 94/181 (51%)
Query: 105 HRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
H S V ++ L+A+ +D + LW +L GH V+ + + +L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
V+ S S+++WD+ + L+T+ GH N+ + F P +FV S S+D IK+W++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV GH + VR ++ SPDG LAS ++DHT ++W L + +E GH V V +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 284 P 284
P
Sbjct: 199 P 199
Score = 238 (88.8 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 50/153 (32%), Positives = 83/153 (54%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L+GH SPV V + L+ + S+ +IR+WD E + R L GH ++ + F G
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S S D ++KLWD+ C+ +GH V + F P+ ++ SA+ D T+K+W++
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
G + GH V ++ P+ LLAS S+D
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 168 (64.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 33/92 (35%), Positives = 50/92 (54%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+GS+D IKLWD+ +F GH VR + F P GK+L S DD T+++WD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397
+ M H+ V ++FH + +GS D
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 166 (63.5 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATG D + LW + + + +L GH + V V + + +V+ ++RVWD
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL H + SLDFH +V +GS D +K+W+ R
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Score = 154 (59.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ GS+ +I++WD+ + +L TL+GH + + FHP G+++ S D +++WD K
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ HS V L F ++ + + D TVK+W+
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 57/181 (31%), Positives = 94/181 (51%)
Query: 105 HRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
H S V ++ L+A+ +D + LW +L GH V+ + + +L+
Sbjct: 23 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 82
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
V+ S S+++WD+ + L+T+ GH N+ + F P +FV S S+D IK+W++
Sbjct: 83 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 142
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV GH + VR ++ SPDG LAS ++DHT ++W L + +E GH V V +
Sbjct: 143 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 202
Query: 284 P 284
P
Sbjct: 203 P 203
Score = 222 (83.2 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 46/147 (31%), Positives = 78/147 (53%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L+GH SPV V + L+ + S+ +IR+WD E + R L GH ++ + F G
Sbjct: 62 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 121
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S S D ++KLWD+ C+ +GH V + F P+ ++ SA+ D T+K+W++
Sbjct: 122 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 181
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLL 247
G + GH V ++ P+ LL
Sbjct: 182 AGKMMSEFPGHTGPVNVVEFHPNEYLL 208
Score = 166 (63.5 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATG D + LW + + + +L GH + V V + + +V+ ++RVWD
Sbjct: 40 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 99
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL H + SLDFH +V +GS D +K+W+ R
Sbjct: 100 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 139
Score = 160 (61.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 30/80 (37%), Positives = 45/80 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+GS+D IKLWD+ +F GH VR + F P GK+L S DD T+++WD
Sbjct: 123 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 182
Query: 366 KRNMKTLEAHSHFVTSLDFH 385
+ M H+ V ++FH
Sbjct: 183 GKMMSEFPGHTGPVNVVEFH 202
Score = 154 (59.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ GS+ +I++WD+ + +L TL+GH + + FHP G+++ S D +++WD K
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 141
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ HS V L F ++ + + D TVK+W+
Sbjct: 142 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 179
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 224 (83.9 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 46/162 (28%), Positives = 85/162 (52%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++D+ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V T CV T H++ V +K + +G+ + S +D V+
Sbjct: 260 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 211 (79.3 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
F P +A+ + + ++ E+G+ E +L + IA+ GK L S + D +
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
++D++T + L T++GH + + F P+S +++AS D IK+++V TL+GH
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + PD T S S+D + +VW + T+
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Score = 195 (73.7 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 50/196 (25%), Positives = 97/196 (49%)
Query: 91 EWIP-RAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHL 148
+W R +++L GH+ V+ V + AS S DA IRLWD + G+ +++ G +
Sbjct: 48 KWCDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPV 107
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
D+ +AF + L + + + ++ + + + ++ + +A+ P+ ++ S
Sbjct: 108 DA-WTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
+ D I ++++ATG + TL GH +R + SPD LL + S+D +++ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 269 ELRGHDHTVECVAWAP 284
L GH V VA+ P
Sbjct: 227 TLSGHASWVLNVAFCP 242
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/99 (36%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+G+ D I ++D+ +G LL TL GH +R +TF P + LV+ DD ++++D +
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H+ +V ++ F + V+ S DK+VKVW+
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 175 (66.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I+++D + L GH V ++AF
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+ T C+ T H V GV + N ++S D+ I +++
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 153 (58.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 59/232 (25%), Positives = 101/232 (43%)
Query: 180 YQCL-KTMQGHDHNVTGVAF----LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234
Y L K Q HD + VA+ NS+ V++ S D +K+W+ +C + L +W
Sbjct: 5 YSILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWK----WCDERLD--LQW 58
Query: 235 VRQIKVSPDGTLLASCSND--HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292
S +G L S D HT + + ++ + L D+ + + G
Sbjct: 59 ------SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVD---- 108
Query: 293 EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC 352
A YLATG+ + ++ V SG ++L ++ + + P GKYL S
Sbjct: 109 --AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 353 GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
D + ++D A + + TLE H+ + SL F +VT S D +K+++
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 149 (57.5 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV +L TL GH +WV V F P + VS DK+++VWD +
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + ++ +V+ D+ + V++C
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYDC 303
Score = 121 (47.7 bits), Expect = 4.9e-25, Sum P(2) = 4.9e-25
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDVG+ + + T H + V GV ++ G +VS GDD+ + V+D
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 292 (107.8 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 75/260 (28%), Positives = 120/260 (46%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P +A+ +ED IR+WD T GH + + F + G+ + S S D +
Sbjct: 352 VCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRT 411
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG- 230
++LWD+ L D VT VA P++ +V + S DK++++W++ G V+ L G
Sbjct: 412 VRLWDIENGTALTVFTIED-GVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGP 470
Query: 231 --HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288
H++ V + SP+G L + S D T ++W LAT + +G CV G
Sbjct: 471 DGHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGG-RCVKTFEGHRD 529
Query: 289 ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY 348
+S A ++ +GS+D+ ++ WD +GS L GH N V V P G +
Sbjct: 530 FVLSVALTPDNQ-----WVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGF 584
Query: 349 LVSCGDDKTLRVWDTANKRN 368
+ D R+W N
Sbjct: 585 FATGSGDMRARIWSYTRMDN 604
Score = 263 (97.6 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 68/202 (33%), Positives = 101/202 (50%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
+ +GH + + F +AS S D T+RLWD E G + D V +A
Sbjct: 381 RIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGT-ALTVFTIEDGVTTVAISP 439
Query: 159 SGKLLVSCSADMSLKLWDMSTYQC----LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
K + + S D S+++WD+ T C L+ GH +V VAF PN +++ S DKTI
Sbjct: 440 DTKYVAAGSLDKSVRVWDL-TQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGSLDKTI 498
Query: 215 KMWEVAT------------GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
K+WE+AT G CVKT GHR++V + ++PD + S S D + W
Sbjct: 499 KLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPR 558
Query: 263 TKETKAELRGHDHTVECVAWAP 284
T T+ L+GH ++V VA +P
Sbjct: 559 TGSTQLMLQGHKNSVISVAPSP 580
Score = 241 (89.9 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 58/174 (33%), Positives = 90/174 (51%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETG-EYER--ALHGHLDSVQDIAFDQSGKLLVS 165
V V P +A+ S D ++R+WD G ER GH DSV +AF +G+ LV+
Sbjct: 432 VTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVT 491
Query: 166 CSADMSLKLWDMSTYQ------------CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
S D ++KLW+++T + C+KT +GH V VA P++ +V+S S+D+
Sbjct: 492 GSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRG 551
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
++ W+ TG L GH+ V + SP G A+ S D AR+WS + +
Sbjct: 552 VQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWSYTRMDNR 605
Score = 201 (75.8 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 71/278 (25%), Positives = 123/278 (44%)
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTG------VAFLP 200
H V + F GK V+ + S +++D++T + + +Q + + TG V F P
Sbjct: 298 HESVVCCVRFSADGKY-VATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSP 356
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ ++ + + DK I++W++ T GH + + + + DG +AS S D T R+W
Sbjct: 357 DGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWD 416
Query: 261 LATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWD 320
+ E L T+E ++ ++ AA L G + ++ D
Sbjct: 417 I---ENGTALTVF--TIEDGVTTVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPD 471
Query: 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR-NM---------- 369
GH + V V F P G+ LV+ DKT+++W+ A R NM
Sbjct: 472 -----------GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRC 520
Query: 370 -KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
KT E H FV S+ + +V++GS D+ V+ W+ R
Sbjct: 521 VKTFEGHRDFVLSVALTPDNQWVMSGSKDRGVQFWDPR 558
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 280 (103.6 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 61/172 (35%), Positives = 86/172 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V F P + S SED T+RLW +T + GH V D++F G
Sbjct: 521 LVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGH 580
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ S D + +LW L+ GH ++V V+F PN +V + S DKT +MW+V+T
Sbjct: 581 YFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVST 640
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
G V+ GH V I V PDG L++ S D VW + T + ++RGH
Sbjct: 641 GDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGH 692
Score = 259 (96.2 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 57/169 (33%), Positives = 88/169 (52%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV V F P+ A+ S D T RLW + R GHL+ V ++F +G +
Sbjct: 565 GHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYV 624
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S+D + ++WD+ST ++ GH V +A P+ ++ + S D I +W++ TG
Sbjct: 625 FTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGK 684
Query: 224 CVKTLTGH-REWVRQIKVSPDGTLLASCSNDHTARVWSL--ATKETKAE 269
+K + GH + + + S +G +L S DHT RVW L AT E AE
Sbjct: 685 RLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAE 733
Score = 215 (80.7 bits), Expect = 1.8e-23, Sum P(4) = 1.8e-23
Identities = 54/188 (28%), Positives = 92/188 (48%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAF 156
+ A +G + IK+ +SL S + I L + + E + L GH +V +F
Sbjct: 479 RIAAAGFQDSYIKI-----WSLDGSSLNNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSF 533
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
K L+S S D +++LW M T+ L + +GH+H V V+F P + +AS D+T ++
Sbjct: 534 SPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARL 593
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
W Y ++ GH V + P+G + + S+D T R+W ++T ++ GH
Sbjct: 594 WSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAP 653
Query: 277 VECVAWAP 284
V +A P
Sbjct: 654 VISIAVCP 661
Score = 180 (68.4 bits), Expect = 6.5e-10, Sum P(3) = 6.5e-10
Identities = 35/99 (35%), Positives = 56/99 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YL +GS DKT++LW + + + L + GH++ V V+F P G Y + D+T R+W +
Sbjct: 539 YLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDH 598
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + V + FH YV TGS DKT ++W+
Sbjct: 599 IYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD 637
Score = 176 (67.0 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 38/118 (32%), Positives = 63/118 (53%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V V FHP + + S D T R+WD TG+ R GH V IA G+
Sbjct: 606 AGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRW 665
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHN-VTGVAFLPNSDFVLSASRDKTIKMWEV 219
L + S D + +WD+ T + LK M+GH N + +++ + ++S D T+++W++
Sbjct: 666 LSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Score = 172 (65.6 bits), Expect = 5.3e-09, Sum P(3) = 5.3e-09
Identities = 31/102 (30%), Positives = 56/102 (54%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ TGS DKT ++WDV +G + +GH V + P G++L + +D + VWD
Sbjct: 623 YVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGT 682
Query: 366 KRNMKTLEAHS-HFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +K + H + + SL + + +++G D TV+VW+ +
Sbjct: 683 GKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
Score = 147 (56.8 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
TL+GH V +F P KYL+S +DKT+R+W + + + H+H V + F
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLG 579
Query: 389 PYVVTGSVDKTVKVWEC 405
Y T S D+T ++W C
Sbjct: 580 HYFATASHDQTARLWSC 596
Score = 126 (49.4 bits), Expect = 1.8e-23, Sum P(4) = 1.8e-23
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHD-NWVRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
+L+TGS D I +WD+G+G L + GH N + +++ G L+S G D T+RVWD
Sbjct: 665 WLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
Query: 365 NKRNMKTLEAHSHFV 379
+ E F+
Sbjct: 725 KATTEPSAEPDEPFI 739
Score = 39 (18.8 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 10 ELNKAVADYLLSNGY 24
+LN+ V +YL GY
Sbjct: 59 DLNRIVLEYLNKKGY 73
Score = 37 (18.1 bits), Expect = 5.8e-25, Sum P(3) = 5.8e-25
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 32 KKDADLPAEVEKKYSGL 48
KK+++L + EKK S L
Sbjct: 397 KKESELKVDGEKKDSNL 413
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 290 (107.1 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 64/182 (35%), Positives = 89/182 (48%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E L GH PV F P + + S SED T+RLW +T GH V D
Sbjct: 293 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 352
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
F G VS D +LW YQ L+ GH +V F PNS++V + S D+T++
Sbjct: 353 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 412
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G CV+ TGH+ + + SP+G LA+ + D +W + EL+GH
Sbjct: 413 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 472
Query: 276 TV 277
TV
Sbjct: 473 TV 474
Score = 233 (87.1 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 51/158 (32%), Positives = 76/158 (48%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V F +
Sbjct: 343 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSN 400
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + SAD +++LWD+ C++ GH + + F PN F+ + + D + +W++
Sbjct: 401 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 460
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G V L GH + V ++ S DG +LAS S D+T R+W
Sbjct: 461 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 498
Score = 229 (85.7 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 76/268 (28%), Positives = 116/268 (43%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+A D+T+R+W + L SV+ A D S L+ S D+ ++ D
Sbjct: 243 SLIAGGFADSTVRVWSVTPKK--------LRSVKQAA-DLS--LIDKESDDVLERIMDEK 291
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T LK + GH V G +F P+ +++LS+S D T+++W + T C+ GH V
Sbjct: 292 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 351
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAA 295
+ SP G S +D AR+W+ + GH V C + P VA+ S
Sbjct: 352 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 411
Query: 296 X---------------------XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+LATG+ D + LWD+G G ++ L GH
Sbjct: 412 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 471
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V + F G+ L S D T+R+WD
Sbjct: 472 DTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 192 (72.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 55/195 (28%), Positives = 88/195 (45%)
Query: 224 CVKT-LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK-----AEL----RGH 273
C T L +++ + + V+ D +L+A D T RVWS+ K+ + A+L +
Sbjct: 221 CFYTFLNAYQQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKES 280
Query: 274 DHTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT 329
D +E + + I S YL + S D T++LW + + + L
Sbjct: 281 DDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVG 340
Query: 330 LIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP 389
GH+ V F P G Y VS G D+ R+W T + + ++ H V FH
Sbjct: 341 YKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 400
Query: 390 YVVTGSVDKTVKVWE 404
YV TGS D+TV++W+
Sbjct: 401 YVATGSADRTVRLWD 415
Score = 190 (71.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWDV +G+ + GH + +TF P G++L + D + +WD +
Sbjct: 401 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 460
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ V SL F R + +GS+D TV++W+
Sbjct: 461 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Score = 177 (67.4 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V FHP + +A+ S D T+RLWD G R GH + + F +G+
Sbjct: 384 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 443
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + + D + LWD+ + ++GH V + F + + + S S D T+++W+
Sbjct: 444 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 503
Query: 223 Y 223
+
Sbjct: 504 F 504
Score = 136 (52.9 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +G D+ +LW L GH V FHP Y+ + D+T+R+WD N
Sbjct: 359 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 418
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + SL F ++ TG+ D V +W+
Sbjct: 419 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 457
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 250 (93.1 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 76/271 (28%), Positives = 129/271 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K L+GH V+ + + ++ + S D+T+R+WD TGE L H ++V + F+
Sbjct: 237 KRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 294
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCL---KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
++V+CS D S+ +WDM++ + + + GH V V F + +++SAS D+TIK
Sbjct: 295 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 350
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W +T V+TL GH+ + ++ L+ S S+D+T R+W + L GH+
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 408
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLIGHD 334
V C+ + ++ I A A R +G+L L TL+ H
Sbjct: 409 LVRCIRFD----NKRIVSGAYDGKIKVWDLIAALDPR--------APAGTLCLRTLVEHS 456
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
V + F +VS D T+ +WD N
Sbjct: 457 GRVFRLQFDEF--QIVSSSHDDTILIWDFLN 485
Score = 220 (82.5 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 48/159 (30%), Positives = 90/159 (56%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D TI++WD T E +R L GH SV + +D+ +++++ S+D ++++WD++T + L T+
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTL 280
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV---KTLTGHREWVRQIKVSPD 243
H V + F N+ +++ S+D++I +W++A+ + + L GHR V + D
Sbjct: 281 IHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 336
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ S S D T +VW+ +T E L GH + C+ +
Sbjct: 337 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 375
Score = 172 (65.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+++WDV +G +L TLI H V + F+ G +V+C D+++ VWD A+
Sbjct: 257 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASP 314
Query: 367 RNM---KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ + L H V +DF Y+V+ S D+T+KVW
Sbjct: 315 TDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVW 352
Score = 161 (61.7 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+VS D ++K+WD ST +C + + GH +V + + + +++ S D T+++W+V TG
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 274
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR----GHDHTVE 278
+ TL H E V ++ + +G ++ +CS D + VW +A+ T LR GH V
Sbjct: 275 EMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASP-TDITLRRVLVGHRAAVN 331
Query: 279 CV 280
V
Sbjct: 332 VV 333
Score = 140 (54.3 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ + S D+TIK+W+ + + TL GH + + + + +VS D T+R+WD
Sbjct: 339 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 396
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ LE H V + F +V+G+ D +KVW+
Sbjct: 397 GACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWD 433
Score = 130 (50.8 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT--- 363
+ +GS D TI+LWD+ G+ L L GH+ VR + F K +VS D ++VWD
Sbjct: 380 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLIAA 437
Query: 364 ------ANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
A ++TL HS V L F +V+ S D T+ +W+
Sbjct: 438 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 482
Score = 124 (48.7 bits), Expect = 0.00012, P = 0.00012
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +G RD TIK+WD + L GH V + + + +++ D T+RVWD
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTG 274
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H V L F+ +VT S D+++ VW+
Sbjct: 275 EMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWD 310
Score = 106 (42.4 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 195 GVAFLPNSDF-VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
GV L D ++S RD TIK+W+ +T C + LTGH V ++ D ++ + S+D
Sbjct: 206 GVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSD 263
Query: 254 HTARVWSLATKETKAELRGHDHTV 277
T RVW + T E L H V
Sbjct: 264 STVRVWDVNTGEMLNTLIHHCEAV 287
Score = 64 (27.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
D + S D+T ++W +T E K L GH +V C+ +
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY 252
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 223 (83.6 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 45/162 (27%), Positives = 85/162 (52%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++D+ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V T CV T H++ V +K + +G+ + S +D ++
Sbjct: 260 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 211 (79.3 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
F P +A+ + + ++ E+G+ E +L + IA+ GK L S + D +
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
++D++T + L T++GH + + F P+S +++AS D IK+++V TL+GH
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + PD T S S+D + +VW + T+
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Score = 197 (74.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 49/187 (26%), Positives = 94/187 (50%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFD 157
+++L GH+ V+ V + AS S DA IRLWD E G+ +++ G +D+ +AF
Sbjct: 57 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA-WTLAFS 115
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+ L + + + ++ + + + ++ + +A+ P+ ++ S + D I ++
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
++ATG + TL GH +R + SPD LL + S+D +++ + L GH V
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 278 ECVAWAP 284
VA+ P
Sbjct: 236 LNVAFCP 242
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/99 (36%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+G+ D I ++D+ +G LL TL GH +R +TF P + LV+ DD ++++D +
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H+ +V ++ F + V+ S DK+VKVW+
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 175 (66.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I+++D + L GH V ++AF
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+ T C+ T H V GV + N ++S D+ I +++
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 148 (57.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV +L TL GH +WV V F P + VS DK+++VWD +
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + ++ +V+ D+ + +++C
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 303
Score = 148 (57.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 37/162 (22%), Positives = 78/162 (48%)
Query: 125 SEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182
S D +++W + E + + +L GH V + + + S S D ++LWD+ +
Sbjct: 39 SLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
+K++ + +AF P+S ++ + + + ++ V +G +L +++ I SP
Sbjct: 99 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
DG LAS + D ++ +AT + L GH + + ++P
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 59/232 (25%), Positives = 100/232 (43%)
Query: 180 YQCL-KTMQGHDHNVTGVAF----LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234
Y L K Q HD + VA+ NS+ V++ S D +K+W+ R+
Sbjct: 5 YSILFKQEQAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWK------------WRDE 52
Query: 235 VRQIKVSPDGTLLASCSND--HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292
++ S +G L S D HT + A+ A +R D +E + + +
Sbjct: 53 KLDLQWSLEGHQLGVVSVDISHTLPI--AASSSLDAHIRLWD--LENGKQIKSIDAGPVD 108
Query: 293 EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC 352
A YLATG+ + ++ V SG ++L ++ + + P GKYL S
Sbjct: 109 --AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 353 GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
D + ++D A + + TLE H+ + SL F +VT S D +K+++
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 120 (47.3 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDVG+ + + T H + V GV ++ G +VS GDD+ + ++D
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 223 (83.6 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 45/162 (27%), Positives = 85/162 (52%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++D+ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V T CV T H++ V +K + +G+ + S +D ++
Sbjct: 260 DVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
Score = 211 (79.3 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
F P +A+ + + ++ E+G+ E +L + IA+ GK L S + D +
Sbjct: 114 FSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
++D++T + L T++GH + + F P+S +++AS D IK+++V TL+GH
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + PD T S S+D + +VW + T+
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Score = 197 (74.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 49/187 (26%), Positives = 94/187 (50%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFD 157
+++L GH+ V+ V + AS S DA IRLWD E G+ +++ G +D+ +AF
Sbjct: 57 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDA-WTLAFS 115
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+ L + + + ++ + + + ++ + +A+ P+ ++ S + D I ++
Sbjct: 116 PDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
++ATG + TL GH +R + SPD LL + S+D +++ + L GH V
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 278 ECVAWAP 284
VA+ P
Sbjct: 236 LNVAFCP 242
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/99 (36%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+G+ D I ++D+ +G LL TL GH +R +TF P + LV+ DD ++++D +
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H+ +V ++ F + V+ S DK+VKVW+
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 175 (66.7 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I+++D + L GH V ++AF
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+ T C+ T H V GV + N ++S D+ I +++
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
Score = 148 (57.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 31/99 (31%), Positives = 51/99 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV +L TL GH +WV V F P + VS DK+++VWD +
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + ++ +V+ D+ + +++C
Sbjct: 265 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 303
Score = 148 (57.2 bits), Expect = 3.1e-19, Sum P(2) = 3.1e-19
Identities = 37/162 (22%), Positives = 78/162 (48%)
Query: 125 SEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182
S D +++W + E + + +L GH V + + + S S D ++LWD+ +
Sbjct: 39 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
+K++ + +AF P+S ++ + + + ++ V +G +L +++ I SP
Sbjct: 99 IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
DG LAS + D ++ +AT + L GH + + ++P
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Score = 143 (55.4 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 57/227 (25%), Positives = 98/227 (43%)
Query: 184 KTMQGHDHNVTGVAF----LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
K Q HD + VA+ NS+ V++ S D +K+W+ R+ ++
Sbjct: 10 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWK------------WRDERLDLQ 57
Query: 240 VSPDGTLLASCSND--HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXX 297
S +G L S D HT + A+ A +R D +E + + + A
Sbjct: 58 WSLEGHQLGVVSVDISHTLPI--AASSSLDAHIRLWD--LENGKQIKSIDAGPVD--AWT 111
Query: 298 XXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKT 357
YLATG+ + ++ V SG ++L ++ + + P GKYL S D
Sbjct: 112 LAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 358 LRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ ++D A + + TLE H+ + SL F +VT S D +K+++
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 120 (47.3 bits), Expect = 6.3e-25, Sum P(2) = 6.3e-25
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDVG+ + + T H + V GV ++ G +VS GDD+ + ++D
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 302
>UNIPROTKB|O43172 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9606 "Homo sapiens" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=IC;NAS] [GO:0008380 "RNA splicing" evidence=NAS;TAS]
[GO:0006396 "RNA processing" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 EMBL:AF001687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471090 Reactome:REACT_1675
GO:GO:0005681 GO:GO:0015030 GO:GO:0000398 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AL449305 GO:GO:0071001 PDB:1MZW PDBsum:1MZW
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 HOVERGEN:HBG030892 OMA:CKIWDLR OrthoDB:EOG45DWP9
EMBL:AF016369 EMBL:U82756 EMBL:BC001588 EMBL:BC007424
IPI:IPI00150269 IPI:IPI00218435 RefSeq:NP_001231855.1
RefSeq:NP_004688.2 UniGene:Hs.374973 ProteinModelPortal:O43172
SMR:O43172 IntAct:O43172 MINT:MINT-270624 STRING:O43172
PhosphoSite:O43172 PaxDb:O43172 PRIDE:O43172 DNASU:9128
Ensembl:ENST00000374198 Ensembl:ENST00000374199 GeneID:9128
KEGG:hsa:9128 UCSC:uc004bgx.3 GeneCards:GC09P116037 HGNC:HGNC:17349
HPA:HPA021794 HPA:HPA022248 MIM:607795 neXtProt:NX_O43172
PharmGKB:PA38448 InParanoid:O43172 PhylomeDB:O43172
BindingDB:O43172 ChEMBL:CHEMBL1163119 EvolutionaryTrace:O43172
GenomeRNAi:9128 NextBio:34217 ArrayExpress:O43172 Bgee:O43172
CleanEx:HS_PRPF4 Genevestigator:O43172 GermOnline:ENSG00000136875
Uniprot:O43172
Length = 522
Score = 289 (106.8 bits), Expect = 6.8e-25, P = 6.8e-25
Identities = 83/309 (26%), Positives = 130/309 (42%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF------- 156
G P+ F P ++A+ +LW L GH +V I F
Sbjct: 229 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 288
Query: 157 -DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
D L SC+AD S+KLW + + + + ++GH V V + P+ F+ + D++ +
Sbjct: 289 LDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWR 348
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ + GH V I DG+L + D RVW L T L GH
Sbjct: 349 LWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLK 408
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ + ++P ++ATGS D T K+WD+ ++T+ H N
Sbjct: 409 EIYGINFSPN------------------GYHIATGSGDNTCKVWDLRQRRCVYTIPAHQN 450
Query: 336 WVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
V GV F P G +L++ D T ++W +KTL H V LD + T
Sbjct: 451 LVTGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATC 510
Query: 395 SVDKTVKVW 403
S D+T K+W
Sbjct: 511 SYDRTFKLW 519
Score = 268 (99.4 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 62/175 (35%), Positives = 90/175 (51%)
Query: 87 RSPTEWIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH 145
RS W A E+ GH V + FH SL + DA R+WD TG L
Sbjct: 345 RSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLE 404
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP-NSDF 204
GHL + I F +G + + S D + K+WD+ +C+ T+ H + VTGV F P + +F
Sbjct: 405 GHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNF 464
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+L+ + D T K+W +KTL GH V + +S DG L+A+CS D T ++W
Sbjct: 465 LLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519
Score = 249 (92.7 bits), Expect = 7.7e-19, P = 7.7e-19
Identities = 57/202 (28%), Positives = 97/202 (48%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHP--VFSL------MASCSEDATIRLWDYETGEYER 142
W +P L GH + V ++FHP SL +ASC+ D +++LW ++ E
Sbjct: 258 WSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVA 317
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ GH V + + SG+ L + D S +LWD+ + + +GH V +AF +
Sbjct: 318 DIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDG 377
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ D ++W++ TG C+ L GH + + I SP+G +A+ S D+T +VW L
Sbjct: 378 SLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 437
Query: 263 TKETKAELRGHDHTVECVAWAP 284
+ + H + V V + P
Sbjct: 438 QRRCVYTIPAHQNLVTGVKFEP 459
Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 59/219 (26%), Positives = 89/219 (40%)
Query: 188 GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLL 247
G D ++ F PNS + +A K+W V + TL GH V I P T+
Sbjct: 229 GDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVS 288
Query: 248 ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYL 307
+ + A S A + +L D E VA + ++ A +L
Sbjct: 289 LDPKDVNLA---SCAA-DGSVKLWSLDSD-EPVA---DIEGHTVRVARVMWHPSGR--FL 338
Query: 308 ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
T D++ +LWD+ + + GH V + FH G + G D RVWD R
Sbjct: 339 GTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGR 398
Query: 368 NMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ LE H + ++F ++ TGS D T KVW+ R
Sbjct: 399 CIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR 437
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 300 (110.7 bits), Expect = 7.3e-25, P = 7.3e-25
Identities = 82/306 (26%), Positives = 141/306 (46%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
G + + ++ P +A+ S D +I ++ + + L GH D V F K L
Sbjct: 1912 GSTNTIKHCVYSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKL 1971
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
VS D +L++W++ T + L ++GH ++ F + +++SAS D ++K+W+ G
Sbjct: 1972 VSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGS 2031
Query: 224 CVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ +L H+ + + S D + + S S+D + W A L GH ++ V +
Sbjct: 2032 EITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQF 2090
Query: 283 AP---GVASESISEAAXXXXXXXXXXYL--ATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
P G S S S + L A+ S D T+KLW+ S + T H +
Sbjct: 2091 NPNSGGGGSSSFSSFSSFSSSSDAPVTLSIASSSDDGTVKLWEFNSATA--TTSAHKGSI 2148
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397
F GKY+ +CG D L +WD N+KT+ S VT+ F+R+ + G D
Sbjct: 2149 NQCVFSKDGKYVATCGQDCVLNIWDAKTHINLKTMIFESP-VTTCSFNRSGVLFI-GLQD 2206
Query: 398 KTVKVW 403
T++V+
Sbjct: 2207 GTLEVY 2212
Score = 271 (100.5 bits), Expect = 1.4e-20, P = 1.4e-20
Identities = 75/286 (26%), Positives = 129/286 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFDQSG 160
L GH + + F P +L+AS SED I++W+ +T + E + H D + I+F+ +
Sbjct: 1824 LHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPINCISFNPTN 1883
Query: 161 KL-LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
+ L+SCS D S K+W T + +G + + + P+ ++ + SRD +I ++
Sbjct: 1884 ECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYLC 1943
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
++ + L GH +WV SPD L S D RVW++ T++ L+GH
Sbjct: 1944 SSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGH------ 1997
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339
S SI +A Y+ + S D ++K+WD GS + +L
Sbjct: 1998 --------SSSIEKA----FFTKDQKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDV 2045
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
V+ + S DD ++ W + TL HS + + F+
Sbjct: 2046 VSSSDASGRIFSSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFN 2091
Score = 253 (94.1 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 79/287 (27%), Positives = 128/287 (44%)
Query: 125 SEDATIRLWDYETG-EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST---Y 180
S+DAT ++W G + L +AF + LL + D +++L+D+S+ Y
Sbjct: 1759 SDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIY 1818
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+ + + GH +T + F P+ + + S S D IK+W V T T+ K
Sbjct: 1819 REVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIE---------KA 1869
Query: 241 SPDGTLLASCSNDHTARVWSLATK-ETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
D S + + + S + TK R T +++E +
Sbjct: 1870 HNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTT--------LSTEGSTNTIKHCV 1921
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
Y+AT SRD +I ++ S LLF L GH +WV TF P K LVS G D LR
Sbjct: 1922 YSPDGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLR 1981
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
VW+ ++ + L+ HS + F + Y+++ S D +VKVW+ +
Sbjct: 1982 VWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQ 2028
Score = 229 (85.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 72/315 (22%), Positives = 144/315 (45%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALH---GHLD--SVQDIAF 156
S H PV + P +L+AS S D TI++W+ ++T +R H L S++ F
Sbjct: 1647 SAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKF 1706
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ K +++ + + L+D+++ + + M H +V + + +++++ S D T K+
Sbjct: 1707 SANSKQILATTMKNDVLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDATAKV 1766
Query: 217 WEVATG-YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK---ETKAELRG 272
W G L W + SP LLA + D T R++ +++ A+L G
Sbjct: 1767 WSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHG 1826
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI- 331
H + + ++P S ++ +A+ S D IK+W+V + +T+
Sbjct: 1827 HTRAITSITFSP---SGNL---------------IASTSEDLLIKVWNVQTHKAEYTIEK 1868
Query: 332 GHDNWVRGVTFHPGGKY-LVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
H++ + ++F+P + L+SC DD + +VW + E ++ + + Y
Sbjct: 1869 AHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKY 1928
Query: 391 VVTGSVDKTVKVWEC 405
+ T S D ++ V+ C
Sbjct: 1929 IATVSRDCSIAVYLC 1943
Score = 226 (84.6 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 72/289 (24%), Positives = 124/289 (42%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
S++AS +D+ I ++ G L GH + + +F GK L S S D ++ +WD+
Sbjct: 1535 SMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLI 1594
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYCVKTL-TGHREWVR 236
+ + H V F P ++ ++S + D +I ++ + + + H + V
Sbjct: 1595 VGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVN 1654
Query: 237 QIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAX 296
SPDGTL+AS S D T ++W+ K L+ H ++ AS S
Sbjct: 1655 SCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLK---HVID--------ASLSYGSIKS 1703
Query: 297 XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
LAT ++ + L+DV S L+ + H V + G Y+V+ DD
Sbjct: 1704 CKFSANSKQILATTMKNDVL-LFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSDDA 1762
Query: 357 TLRVWD-TANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
T +VW T + L + L F P + G+ D TV++++
Sbjct: 1763 TAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFD 1811
Score = 211 (79.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 75/289 (25%), Positives = 125/289 (43%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F L GH V F P + S D +R+W+ +T + L GH S++ F +
Sbjct: 1950 FRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKD 2009
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWE 218
K ++S S D S+K+WD + +++ H ++ V + S + S+S D IK W
Sbjct: 2010 QKYIISASFDGSVKVWDAQFGSEITSLR-HQTRISDVVSSSDASGRIFSSSDDGIIKSWY 2068
Query: 219 VATGYCVKTLTGHREWVRQIKVSPD--GTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
G C+ TLTGH ++Q++ +P+ G +S S+ + S A D T
Sbjct: 2069 PVAGSCLATLTGHSGPIKQVQFNPNSGGGGSSSFSSFSSFSSSSDAPVTLSIASSSDDGT 2128
Query: 277 VECVAWAPGVASESISEAAXXX-XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDN 335
V+ + A+ S + + Y+AT +D + +WD + L T+I ++
Sbjct: 2129 VKLWEFNSATATTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKTHINLKTMI-FES 2187
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRV----WDTA---NKRNMKTLEAHSH 377
V +F+ G + D TL V W T K N K + +H
Sbjct: 2188 PVTTCSFNRSGVLFIGL-QDGTLEVYSKDWKTVLHKEKTNGKITRSSAH 2235
Score = 205 (77.2 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 79/312 (25%), Positives = 128/312 (41%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
E L GH + + F +AS S D T+ +WD G H +V F
Sbjct: 1556 ELLTLVGHSNWISCFSFSDDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFS 1615
Query: 158 QSGK-LLVSCSADMSLKLWDMSTYQCLKTMQG-HDHNVTGVAFLPNSDFVLSASRDKTIK 215
+ LL+SC+ D S+ +++ S + + H V + P+ + S+S D TIK
Sbjct: 1616 PTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGTIK 1675
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W T+ R I S + SC ++ LAT K ++ D
Sbjct: 1676 IWNP-----FDTIAKDR-LKHVIDASLSYGSIKSCKFSANSKQ-ILATT-MKNDVLLFDV 1727
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT-LIGHD 334
+ + G S+S++ + Y+ TGS D T K+W G+ L LI D
Sbjct: 1728 NSQKLISVMGNHSKSVNHCSLSNDGN----YIVTGSDDATAKVWSSTLGTQLTNFLIPGD 1783
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK---RNMKTLEAHSHFVTSLDFHRAHPYV 391
W + F P L D T+R++D ++ R + L H+ +TS+ F + +
Sbjct: 1784 CWANCLAFSPTQPLLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLI 1843
Query: 392 VTGSVDKTVKVW 403
+ S D +KVW
Sbjct: 1844 ASTSEDLLIKVW 1855
Score = 166 (63.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 56/271 (20%), Positives = 109/271 (40%)
Query: 141 ERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLP 200
++ + G D + + G ++ S D + ++ S L T+ GH + ++ +F
Sbjct: 1515 KQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSD 1574
Query: 201 NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVW 259
+ + S+S D T+ +W++ G + H V + SP LL SC+ D + ++
Sbjct: 1575 DGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIF 1634
Query: 260 SLATKETKAELRG-HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
+ + K R H V W+P +A+ S D TIK+
Sbjct: 1635 NTSDKNIFRNFRSAHSKPVNSCCWSPD------------------GTLIASSSWDGTIKI 1676
Query: 319 WD----VGSGSLLFTLIGHDNW--VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
W+ + L + ++ ++ F K +++ + ++D +++ + +
Sbjct: 1677 WNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKNDVLLFDVNSQKLISVM 1736
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
HS V Y+VTGS D T KVW
Sbjct: 1737 GNHSKSVNHCSLSNDGNYIVTGSDDATAKVW 1767
Score = 144 (55.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 47/192 (24%), Positives = 76/192 (39%)
Query: 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241
C +T+ G + T + + + SA +D I +++ + G + TL GH W+ S
Sbjct: 1514 CKQTITGLEDGATACCYSRDGSMIASAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFS 1573
Query: 242 PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXX 301
DG LAS S D+T VW L + + H V ++P A+ + A
Sbjct: 1574 DDGKTLASSSWDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSP-TANNLLMSCAWDSSI- 1631
Query: 302 XXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
+ + DK I + S H V + P G + S D T+++W
Sbjct: 1632 -----IIFNTSDKNI-FRNFRSA--------HSKPVNSCCWSPDGTLIASSSWDGTIKIW 1677
Query: 362 ---DTANKRNMK 370
DT K +K
Sbjct: 1678 NPFDTIAKDRLK 1689
Score = 132 (51.5 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 36/114 (31%), Positives = 52/114 (45%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W I E L GH S + K F + S S D ++++WD + G +L H
Sbjct: 1983 WNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSLR-HQTR 2041
Query: 151 VQDI--AFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ D+ + D SG++ S S D +K W CL T+ GH + V F PNS
Sbjct: 2042 ISDVVSSSDASGRIF-SSSDDGIIKSWYPVAGSCLATLTGHSGPIKQVQFNPNS 2094
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 53/243 (21%), Positives = 96/243 (39%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+ S S D ++KLW+ ++ T H ++ F + +V + +D + +W+ T
Sbjct: 2120 IASSSDDGTVKLWEFNS--ATATTSAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAKTH 2177
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+KT+ V + G L D T V+S K+ K L H
Sbjct: 2178 INLKTMIFESP-VTTCSFNRSGVLFIGLQ-DGTLEVYS---KDWKTVL--HKEKTN---- 2226
Query: 283 APGVASESISEAAXXXXXXXXXXYL---ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339
G + S + + Y+ A + + L + S ++ D+WV
Sbjct: 2227 --GKITRSSAHPSLNIQSTESPDYIDLFAFSTWTNCVNLLNC-SEKYFDPIVSFDDWVES 2283
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
V F G L + K ++++ N + + T + S +VTSL F Y+ G+ D T
Sbjct: 2284 VEFSTSGDLLAAGSRTKQVKIFSPLNDKPV-THQTSSSYVTSLSFSPNDKYLAIGTFDGT 2342
Query: 400 VKV 402
V++
Sbjct: 2343 VEL 2345
Score = 128 (50.1 bits), Expect = 0.00029, P = 0.00029
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
D V+ + F SG LL + S +K++ + + T Q VT ++F PN ++
Sbjct: 2279 DWVESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPV-THQTSSSYVTSLSFSPNDKYLAIG 2337
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
+ D T+++ ++A+G + LT + +K D T L S SND + VW+ +T +
Sbjct: 2338 TFDGTVELLDIASGKLRRILTTQVSSITSLKFL-DSTRLVSVSNDRSLIVWNFSTSSIEN 2396
Query: 269 E 269
E
Sbjct: 2397 E 2397
Score = 86 (35.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA GSR K +K++ + + T ++V ++F P KYL D T+ + D A+
Sbjct: 2293 LAAGSRTKQVKIFSPLNDKPV-THQTSSSYVTSLSFSPNDKYLAIGTFDGTVELLDIASG 2351
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + L +TSL F + +V+ S D+++ VW
Sbjct: 2352 KLRRILTTQVSSITSLKFLDS-TRLVSVSNDRSLIVW 2387
Score = 67 (28.6 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 349 LVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ S DD T+++W+ N T AH + F + YV T D + +W+ +
Sbjct: 2120 IASSSDDGTVKLWEF-NSATATT-SAHKGSINQCVFSKDGKYVATCGQDCVLNIWDAK 2175
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 222 (83.2 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 50/159 (31%), Positives = 89/159 (55%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV--QDIAFDQSGKLLVSC 166
V+ V + P L+A D T++++ +T ++ +L+GH V DI++D G L+ +
Sbjct: 552 VLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYD--GALIATG 609
Query: 167 SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK 226
SAD ++K+W + C K++ HD +V + F+P S +A +D+ IK W+ ++
Sbjct: 610 SADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQ 669
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
TL GH + + + VSP G + S S+D + R+W T+E
Sbjct: 670 TLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE-RTRE 707
Score = 201 (75.8 bits), Expect = 7.5e-25, Sum P(2) = 7.5e-25
Identities = 50/173 (28%), Positives = 84/173 (48%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W R EK L G + V + P +A ED +IR++ +GE +GH +
Sbjct: 50 WDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAA 109
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ + +DQ G L S S D + +WD+ L ++GH +T FL + ++++ +
Sbjct: 110 ITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGK 169
Query: 211 DKTIKMWEVATGYCVKTLTGHREWV-RQIKVSPDGTLLASCSNDHTARVWSLA 262
D +K W++ T +C KT+ GHR V + VS + L+ S D R W ++
Sbjct: 170 DTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSEEKRLITGAS-DSELRAWDIS 221
Score = 201 (75.8 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 39/122 (31%), Positives = 70/122 (57%)
Query: 99 KFALS--GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
KF LS GH+ PVI + +L+A+ S D +++W + G+ ++L H DSV + F
Sbjct: 582 KFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRF 641
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
L + D +K WD ++ ++T++GH + +A P+ D+V+S+S DK++++
Sbjct: 642 VPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRL 701
Query: 217 WE 218
WE
Sbjct: 702 WE 703
Score = 196 (74.1 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 63/244 (25%), Positives = 104/244 (42%)
Query: 130 IRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM-------STYQC 182
++L+D +G + H ++ ++ + V+ AD S+K WD ST +
Sbjct: 478 LQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKR 537
Query: 183 LKTMQGH----DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
L Q D V V++ PN + + D T+K++ V T +L GH+ V +
Sbjct: 538 LSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICM 597
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG L+A+ S D ++W L + L HD +V + + P
Sbjct: 598 DISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVP-------------- 643
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
T +D+ IK WD + TL GH + + P G Y+VS DK+L
Sbjct: 644 ----KSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSL 699
Query: 359 RVWD 362
R+W+
Sbjct: 700 RLWE 703
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/260 (21%), Positives = 115/260 (44%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH V+ ++F ++S +AD S+K+W+ ST QC++TM ++ + F+P V
Sbjct: 413 GHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTM-ACEYALCSF-FVPGDRQV 469
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ ++ ++++++A+G ++T+ H + + +SPD + D + + W
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF---- 525
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
EL +++ + + + E LA D T+K++ V +
Sbjct: 526 ---ELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLK 582
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF- 384
+L GH V + G + + D+ +++W K+L AH V L F
Sbjct: 583 FFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFV 642
Query: 385 HRAHPYVVTGSVDKTVKVWE 404
++H + G D+ +K W+
Sbjct: 643 PKSHLFFTAGK-DRKIKQWD 661
Score = 160 (61.4 bits), Expect = 7.5e-25, Sum P(2) = 7.5e-25
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D+ +K+W + G +L HD+ V + F P + G D+ ++ WD
Sbjct: 606 IATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRKIKQWDADKF 665
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++TLE H + L + YVV+ S DK++++WE
Sbjct: 666 EHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 140 (54.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 37/169 (21%), Positives = 73/169 (43%)
Query: 127 DATIRLWDYETGEYERALHGHL-----------DSVQDIAFDQSGKLLVSCSADMSLKLW 175
D +++ WD+E + E + L + V +++ + KLL D ++K++
Sbjct: 517 DKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIF 576
Query: 176 DMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWV 235
+ T + ++ GH V + + + + S D+ +K+W + G C K+L H + V
Sbjct: 577 YVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSV 636
Query: 236 RQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
++ P L + D + W E L GH + C+A +P
Sbjct: 637 MYLRFVPKSHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSP 685
Score = 127 (49.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS+D I +WDV + S L+ L GH + + F LV+ G D ++ WD +
Sbjct: 122 LASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQ 181
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KT+ H V L ++TG+ D ++ W+
Sbjct: 182 HCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWD 219
Score = 113 (44.8 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 33/142 (23%), Positives = 58/142 (40%)
Query: 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
+WD GE L G V + G L D S++++ + + + T GH
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
+T + + + S S+D I +W+V + L GH++ + Q + LL +
Sbjct: 109 AITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSG 168
Query: 252 NDHTARVWSLATKETKAELRGH 273
D + W L T+ + GH
Sbjct: 169 KDTMVKWWDLDTQHCFKTMVGH 190
Score = 112 (44.5 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 37/172 (21%), Positives = 73/172 (42%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ L GH+ + + +F +L+ + +D ++ WD +T + + GH V +
Sbjct: 143 YRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVLVSE 202
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
K L++ ++D L+ WD+S Q ++ + + + D + D T++M E
Sbjct: 203 EKRLITGASDSELRAWDISYLQEIEDPEEPEPKKIKESSPGIQDS--HEAEDGTLEMDET 260
Query: 220 ATGY---CVKT---LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
C K + R+ V + V G +LA D V+ + +KE
Sbjct: 261 PEDRILTCRKAGSIMREGRDRVVNLAVDKTGRILACHGTDSVLEVFCILSKE 312
Score = 106 (42.4 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 26/104 (25%), Positives = 47/104 (45%)
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
+WD+ + + +QG H VT + P+ + D +I+++ + +G T GH+
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKA 108
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+ +K G LAS S D VW + + L+GH +
Sbjct: 109 AITSLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAI 152
Score = 72 (30.4 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
T+ GH +V ++F ++ +LSA+ D +IK+W +T C++T+
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRSTLQCIRTM 452
Score = 58 (25.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT 263
T+ GHR VR + S D + S + D + ++W+ +T
Sbjct: 410 TIGGHRSDVRTLSFSSDNIAILSAAAD-SIKIWNRST 445
Score = 43 (20.2 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
G +A + +H +W L E L+G H V C+ +P
Sbjct: 36 GRYVAVPACEHVF-IWDLRKGEKILILQGLKHEVTCLCPSP 75
Score = 42 (19.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 307 LATGSRDKTIKLWDV 321
L TG+ D ++ WD+
Sbjct: 206 LITGASDSELRAWDI 220
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 294 (108.6 bits), Expect = 8.0e-25, P = 8.0e-25
Identities = 73/268 (27%), Positives = 133/268 (49%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + + +++ + S+ +W+ T +KT + D V F
Sbjct: 6 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ ++V++ + D I+++ T V H +++R I V P + + S+D ++
Sbjct: 66 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 125
Query: 259 WSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K + +++ GH H V + P ++ A+ S D+TIK
Sbjct: 126 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-----------------FASASLDRTIK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W +GS S FTL GH+ V + ++ GG YL+S DD+ +++WD NK ++TLE H
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+ + FH P ++TGS D TV++W
Sbjct: 229 AQNVSCVSFHPELPIIITGSEDGTVRIW 256
Score = 272 (100.8 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 70/270 (25%), Positives = 127/270 (47%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HP M + + ++ +W++ET + V+ F +V
Sbjct: 14 RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY- 223
+ + DM +++++ +T + + + H + +A P F+L++S D IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 133
Query: 224 CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C + GH +V QI ++P D AS S D T +VW L + L GH+ V C+ +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G YL +G+ D+ +K+WD + + + TL GH V V+F
Sbjct: 194 YSG----------------GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
HP +++ +D T+R+W ++ R TL
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Score = 213 (80.0 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 46/181 (25%), Positives = 86/181 (47%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + + HP + + S+D I+LWD++ + GH V I + +
Sbjct: 98 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
S S D ++K+W + + T++GH+ V + + D +++S + D+ +K+W+
Sbjct: 158 FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V + P+ ++ + S D T R+W +T ++ L V CV
Sbjct: 218 NKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 281 A 281
A
Sbjct: 278 A 278
Score = 179 (68.1 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 42/136 (30%), Positives = 69/136 (50%)
Query: 104 GHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK- 161
GH V++++ +P + AS S D TI++W + L GH V I + G
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDK 199
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
L+S + D +K+WD C++T++GH NV+ V+F P +++ S D T+++W +
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWHSS 259
Query: 221 TGYCVKTLT-G-HREW 234
T TL G R W
Sbjct: 260 TYRLESTLNYGMERVW 275
Score = 156 (60.0 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 54/227 (23%), Positives = 93/227 (40%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ + V V P ++L++ + ++ +W T VKT VR K
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 68
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
+ + ++D RV++ T E H + C+A P
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP------------------T 110
Query: 304 XXYLATGSRDKTIKLWDVG---SGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359
++ T S D IKLWD S S +F GH ++V + +P S D+T++
Sbjct: 111 QPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
VW + TLE H V +D++ PY+++G+ D+ VK+W+
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 115 (45.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 28/108 (25%), Positives = 53/108 (49%)
Query: 100 FALSGHRSPVIKVIFHPVFS--LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
F L GH V + ++ + S ++D +++WDY+ + L GH +V ++F
Sbjct: 179 FTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFH 238
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
++++ S D ++++W STY+ T+ V VA L S+ V
Sbjct: 239 PELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNV 286
Score = 57 (25.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ +P G+++V CGD + + ++ RN K+ + FV + H + Y + S +
Sbjct: 358 IQHNPNGRFVVVCGDGEYI-IYTAMALRN-KSFGSAQEFVWA---HDSSEYAIRES-NSV 411
Query: 400 VKVWE 404
VK+++
Sbjct: 412 VKIFK 416
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 223 (83.6 bits), Expect = 8.4e-18, P = 8.4e-18
Identities = 45/162 (27%), Positives = 85/162 (52%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
++++L ++ + + P +AS + D I ++D TG+ L GH ++ + F
Sbjct: 140 KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+LLV+ S D +K++D+ T+ GH V VAF P+ +S+S DK++K+W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+V T C+ T H++ V +K + +G+ + S +D V+
Sbjct: 260 DVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
Score = 209 (78.6 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
F P +A+ + + ++ E+G+ E +L + IA+ GK L S + D +
Sbjct: 114 FSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
++D++T + L T++GH + + F P+S +++AS D IK+++V TL+GH
Sbjct: 174 IFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 233
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
WV + PD T S S+D + +VW + T+
Sbjct: 234 WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Score = 196 (74.1 bits), Expect = 9.6e-23, Sum P(2) = 9.6e-23
Identities = 49/187 (26%), Positives = 94/187 (50%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHLDSVQDIAFD 157
+++L GH+ V+ V + AS S DA IRLWD E G+ +++ G +D+ +AF
Sbjct: 57 QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDA-WTLAFS 115
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+ L + + + ++ + + + ++ + +A+ P+ ++ S + D I ++
Sbjct: 116 PDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIF 175
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
++ATG + TL GH +R + SPD LL + S+D +++ + L GH V
Sbjct: 176 DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV 235
Query: 278 ECVAWAP 284
VA+ P
Sbjct: 236 LNVAFCP 242
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 36/99 (36%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+G+ D I ++D+ +G LL TL GH +R +TF P + LV+ DD ++++D +
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H+ +V ++ F + V+ S DK+VKVW+
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWD 260
Score = 176 (67.0 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 36/117 (30%), Positives = 59/117 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I+++D + L GH V ++AF
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDT 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD+ T C+ T H V GV + N ++S D+ I +++
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
Score = 149 (57.5 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV +L TL GH +WV V F P + VS DK+++VWD +
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V + ++ +V+ D+ + V++C
Sbjct: 265 TCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYDC 303
Score = 147 (56.8 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 38/162 (23%), Positives = 77/162 (47%)
Query: 125 SEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182
S D +++W + E E + +L GH V + + + S S D ++LWD+ +
Sbjct: 39 SLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ 98
Query: 183 LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSP 242
+K++ + +AF P+S + + + + ++ V +G +L +++ I SP
Sbjct: 99 MKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 158
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
DG LAS + D ++ +AT + L GH + + ++P
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 57/232 (24%), Positives = 100/232 (43%)
Query: 180 YQCL-KTMQGHDHNVTGVAFLPNS----DFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234
Y L K Q HD + VA+ N + V++ S D +K+W+ R+
Sbjct: 5 YSILFKQEQAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWK------------WRDE 52
Query: 235 VRQIKVSPDGTLLASCSND--HTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292
+++ S +G L S D HT + A+ A +R D +E + + +
Sbjct: 53 RLELQWSLEGHQLGVVSVDISHTLPI--AASSSLDAHIRLWD--LENGKQMKSIDAGPVD 108
Query: 293 EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC 352
A +LATG+ + ++ V SG ++L ++ + + P GKYL S
Sbjct: 109 --AWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 166
Query: 353 GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
D + ++D A + + TLE H+ + SL F +VT S D +K+++
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 122 (48.0 bits), Expect = 9.0e-25, Sum P(2) = 9.0e-25
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK++K+WDVG+ + + T H + V GV ++ G +VS GDD+ + V+D
Sbjct: 246 HFVSSSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVYD 302
>UNIPROTKB|F1NC11 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:AADN02037856
EMBL:AADN02037857 EMBL:AADN02037858 EMBL:AADN02037859
EMBL:AADN02037860 IPI:IPI00583802 Ensembl:ENSGALT00000023879
Uniprot:F1NC11
Length = 938
Score = 211 (79.3 bits), Expect = 6.1e-14, P = 6.1e-14
Identities = 42/122 (34%), Positives = 70/122 (57%)
Query: 99 KFALS--GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
KF LS GH+ PV+ + +L+A+ S D +++W + G+ R+L H DSV + F
Sbjct: 577 KFFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQF 636
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
L + D +K WD ++ ++T++GH V +A PN D+V+SAS DK++++
Sbjct: 637 VAKSHLFFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRL 696
Query: 217 WE 218
WE
Sbjct: 697 WE 698
Score = 210 (79.0 bits), Expect = 9.2e-25, Sum P(2) = 9.2e-25
Identities = 45/136 (33%), Positives = 74/136 (54%)
Query: 126 EDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKT 185
ED +IR++ +GE A +GH +V + +DQ G LVS S D + +WD+ L
Sbjct: 84 EDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYR 143
Query: 186 MQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGT 245
++GH VT V FL + ++++ +D +K W++ T +C KTL GHR V + + +
Sbjct: 144 LKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEK 203
Query: 246 LLASCSNDHTARVWSL 261
L + + D RVW +
Sbjct: 204 RLITGTADSELRVWDI 219
Score = 208 (78.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 56/193 (29%), Positives = 100/193 (51%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV--QDIAFDQSGKLLVSC 166
V+ V + P L+A D T++++ +T ++ +L+GH V DI++D G L+ +
Sbjct: 547 VLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYD--GALIATG 604
Query: 167 SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK 226
SAD ++K+W + C +++ HD +V + F+ S +A +D IK W+ ++
Sbjct: 605 SADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQ 664
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK----ETKAELRGHDHTVECVAW 282
TL GH + V + +SP+G + S S+D + R+W + E + E++ E VA
Sbjct: 665 TLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWERTREPLILEEEREMQREAEYEESVAK 724
Query: 283 A--PGVASESISE 293
P VA E+ E
Sbjct: 725 EEQPVVAGETQGE 737
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 64/244 (26%), Positives = 103/244 (42%)
Query: 130 IRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGH 189
++L+D +G L+ H +V IA + V+ AD +K WD + ++Q
Sbjct: 473 LQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKDESSIQKR 532
Query: 190 -----------DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
D +V V + PN + + D T+K++ T +L GH+ V +
Sbjct: 533 LSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCM 592
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG L+A+ S D ++W L + L HD +V + + VA +
Sbjct: 593 DISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQF---VAKSHL------- 642
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
T +D IK WD + TL GH V + P G Y+VS DK+L
Sbjct: 643 --------FFTAGKDNKIKQWDADKFEHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSL 694
Query: 359 RVWD 362
R+W+
Sbjct: 695 RLWE 698
Score = 179 (68.1 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 36/121 (29%), Positives = 65/121 (53%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDY--ETGEYERALHGHLDSVQDIAFDQ 158
A +GH++ V + + + + S S+D + +WD E+G Y L GH D+V + F +
Sbjct: 101 AFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYR--LKGHKDAVTQVLFLK 158
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
LLV+ D +K WD+ T C KT+ GH V G+A + +++ + D +++W+
Sbjct: 159 EKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWD 218
Query: 219 V 219
+
Sbjct: 219 I 219
Score = 175 (66.7 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 58/260 (22%), Positives = 113/260 (43%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH V+ +AF ++S +A+ S+K+W+ ST QC++TM ++ + + F+P V
Sbjct: 408 GHRSDVRTLAFSSDNIAVLSGAAE-SVKIWNRSTLQCIRTMDC-EYALCSL-FVPGDRQV 464
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ ++ ++++++A+G ++TL H V I +SPD + D + W
Sbjct: 465 IVGTKTGKLQLYDLASGTLMETLNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDF---- 520
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
EL + +++ V + E LA D T+K++ +
Sbjct: 521 ---ELVKDESSIQKRLSMKQVRILQLDEDVLCVRYSPNQKLLAVSLLDCTVKVFYTDTLK 577
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF- 384
+L GH V + G + + D+ +++W ++L AH V L F
Sbjct: 578 FFLSLYGHKLPVLCMDISYDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFV 637
Query: 385 HRAHPYVVTGSVDKTVKVWE 404
++H + G D +K W+
Sbjct: 638 AKSHLFFTAGK-DNKIKQWD 656
Score = 149 (57.5 bits), Expect = 9.2e-25, Sum P(2) = 9.2e-25
Identities = 31/98 (31%), Positives = 50/98 (51%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D+ +K+W + G +L HD+ V + F + G D ++ WD
Sbjct: 601 IATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKF 660
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++TLE H V L YVV+ S DK++++WE
Sbjct: 661 EHIQTLEGHHQEVWCLALSPNGDYVVSASHDKSLRLWE 698
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L +GS+D + +WDV + S L+ L GH + V V F LV+ G D ++ WD +
Sbjct: 121 LVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQ 180
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KTL H V + ++TG+ D ++VW+
Sbjct: 181 HCFKTLVGHRTEVWGMALVSEEKRLITGTADSELRVWD 218
Score = 131 (51.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/194 (21%), Positives = 78/194 (40%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQ--------D 153
L+ H V + P + D ++ WD+E + E ++ L Q D
Sbjct: 487 LNAHDGAVWSIALSPDQRGFVTGGADKCVKFWDFELVKDESSIQKRLSMKQVRILQLDED 546
Query: 154 ---IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ + + KLL D ++K++ T + ++ GH V + + + + S
Sbjct: 547 VLCVRYSPNQKLLAVSLLDCTVKVFYTDTLKFFLSLYGHKLPVLCMDISYDGALIATGSA 606
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D+ +K+W + G C ++L H + V ++ L + D+ + W E L
Sbjct: 607 DRNVKIWGLDFGDCHRSLFAHDDSVMYLQFVAKSHLFFTAGKDNKIKQWDADKFEHIQTL 666
Query: 271 RGHDHTVECVAWAP 284
GH V C+A +P
Sbjct: 667 EGHHQEVWCLALSP 680
Score = 125 (49.1 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 45/178 (25%), Positives = 82/178 (46%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ L GH+ V +V+F +L+ + +D ++ WD +T + L GH V +A
Sbjct: 142 YRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWDLDTQHCFKTLVGHRTEVWGMALVSE 201
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
K L++ +AD L++WD++ Q L+ + P ++ D+T+++ E
Sbjct: 202 EKRLITGTADSELRVWDITYIQELEDPD-EPESKKSKGSSPGAE--KDNEEDETLELDES 258
Query: 220 ATGY---CVKTLTGHREWV-RQIKVSPD--GTLLASCSNDHTARVWS-LATKETKAEL 270
C K + RE R + ++ D G +LA D V+S L+ +E K +L
Sbjct: 259 PEERLLKCSKAGSIMREGRDRVVTLATDRMGKILACHGTDAVLEVFSVLSEEEIKKKL 316
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 30/99 (30%), Positives = 46/99 (46%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+LA G D +I+++ + SG GH V + + G LVS D + VWD N
Sbjct: 78 HLAVGYEDGSIRIFSLLSGEASVAFNGHKAAVTALQYDQLGGRLVSGSKDTDVIVWDVIN 137
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ + L+ H VT + F + +VT D VK W+
Sbjct: 138 ESGLYRLKGHKDAVTQVLFLKEKNLLVTSGKDTLVKWWD 176
Score = 112 (44.5 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 37/158 (23%), Positives = 63/158 (39%)
Query: 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
+WD GE L G + G L D S++++ + + + GH
Sbjct: 49 VWDARKGEKVLILKGSKHE-SCLRPSPDGLHLAVGYEDGSIRIFSLLSGEASVAFNGHKA 107
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
VT + + ++S S+D + +W+V + L GH++ V Q+ + LL +
Sbjct: 108 AVTALQYDQLGGRLVSGSKDTDVIVWDVINESGLYRLKGHKDAVTQVLFLKEKNLLVTSG 167
Query: 252 NDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE 289
D + W L T+ L GH V W + SE
Sbjct: 168 KDTLVKWWDLDTQHCFKTLVGHRTEV----WGMALVSE 201
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 294 (108.6 bits), Expect = 9.3e-25, P = 9.3e-25
Identities = 76/268 (28%), Positives = 127/268 (47%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + L++ + ++ +W+ T +K+ + D V F
Sbjct: 6 DVKRKLLARSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+P +V++ S D I+++ T V H +++R + V P + S S+D ++
Sbjct: 66 VPRKSWVVTGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKM 125
Query: 259 WSLATK-ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K K GH H V +A P AT S DKT+K
Sbjct: 126 WDWDNKWAMKQSFEGHTHYVMQIAINP-----------------KDNNTFATASLDKTVK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W GS FTL GH+ V V ++ GG+ Y++S DD +++WD NK ++TL+ H
Sbjct: 169 VWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+S+ FH P ++TGS D TV++W
Sbjct: 229 AQNVSSVCFHPELPLIITGSEDSTVRLW 256
Score = 270 (100.1 bits), Expect = 6.2e-21, P = 6.2e-21
Identities = 70/269 (26%), Positives = 127/269 (47%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HPV + + + + + +W+YET ++ V+ F +V
Sbjct: 14 RSDRVKCVDLHPVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKSWVV 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ S DM +++++ +T + + + H + + P +V+S+S D +KMW+ +
Sbjct: 74 TGSDDMHIRVFNYNTLERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWA 133
Query: 225 VK-TLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+K + GH +V QI ++P D A+ S D T +VW + L GH+ V CV +
Sbjct: 134 MKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G E Y+ +G+ D +K+WD + + + TL GH V V F
Sbjct: 194 YHG------GEKP----------YIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKT 371
HP +++ +D T+R+W AN ++T
Sbjct: 238 HPELPLIITGSEDSTVRLWH-ANTYRLET 265
Score = 206 (77.6 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 46/191 (24%), Positives = 89/191 (46%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + ++ HP + S S+D +++WD++ +++ GH V IA + +
Sbjct: 98 HSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNT 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
+ S D ++K+W + T++GH+ V V + + +++S + D +K+W+
Sbjct: 158 FATASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V + P+ L+ + S D T R+W T + L V C+
Sbjct: 218 NKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLWHANTYRLETTLNYGLERVWCI 277
Query: 281 AWAPGVASESI 291
G + +I
Sbjct: 278 QAQKGANTIAI 288
Score = 194 (73.4 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 62/263 (23%), Positives = 112/263 (42%)
Query: 91 EWIPRAPEKFALSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLD 149
+W + K + GH V+++ +P + A+ S D T+++W + + L GH
Sbjct: 127 DWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEK 186
Query: 150 SVQDIAFDQSGK--LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
V + + G+ ++S + D +K+WD C++T+ GH NV+ V F P +++
Sbjct: 187 GVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIIT 246
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
S D T+++W T TL E V I+ +A D + L +E
Sbjct: 247 GSEDSTVRLWHANTYRLETTLNYGLERVWCIQAQKGANTIA-IGYDEGSVTLKLGREEPA 305
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLL 327
+ D + + + WA SE I +A + G R + + D+GS +
Sbjct: 306 VSM---DSSGK-ILWAKH--SE-IQQANLKTISTEESEAIQDGER-LPLSVKDLGSSEIY 357
Query: 328 FTLIGHDNWVRGVTFHPGGKYLV 350
+ H + R V G+Y+V
Sbjct: 358 PQTLAHSSNGRFVVACGDGEYIV 380
Score = 142 (55.0 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 47/209 (22%), Positives = 89/209 (42%)
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
P ++L+A + + +W T VK+ VR K P + + + S+D RV+
Sbjct: 25 PVETWLLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKSWVVTGSDDMHIRVF 84
Query: 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLW 319
+ T E + H + + P + Y+ + S D +K+W
Sbjct: 85 NYNTLERVHQFEAHSDYLRSLVVHPTLP------------------YVISSSDDMLVKMW 126
Query: 320 DVGSG-SLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
D + ++ + GH ++V + +P + DKT++VW + TLE H
Sbjct: 127 DWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTLEGHEK 186
Query: 378 FVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
V +D++ PY+++G+ D VK+W+
Sbjct: 187 GVNCVDYYHGGEKPYIISGADDHLVKIWD 215
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 89/321 (27%), Positives = 143/321 (44%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLWDY---ET--GEYERALHGHLDSVQDIA 155
L GH V ++ P + ++ S S D +I +W ET G +R+L GH V D+
Sbjct: 11 LKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVV 70
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ +S + D +L+LWD++T + GH +V VAF ++ ++S SRDKTIK
Sbjct: 71 ISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIK 130
Query: 216 MWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELR 271
+W G C T+ GH EWV ++ SP+ + ++ SC D +VW+LA + K
Sbjct: 131 LWNTL-GVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHI 189
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
GH + V +P A+G +D LWD+ G L+TL
Sbjct: 190 GHTGYLNTVTVSPD------------------GSLCASGGKDGQAMLWDLNEGKHLYTLD 231
Query: 332 GHDNWVRGVTFHPGGKYL-------VSCGDDKTLRVWDTANKRNMKT-LEAHSHFVTSLD 383
D + + F P +L + D + + D + + T +A TSL
Sbjct: 232 SGDV-INALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLA 290
Query: 384 FHRAHPYVVTGSVDKTVKVWE 404
+ + G D ++VW+
Sbjct: 291 WSADGQTLFAGYTDNLIRVWQ 311
Score = 256 (95.2 bits), Expect = 5.9e-22, P = 5.9e-22
Identities = 75/231 (32%), Positives = 111/231 (48%)
Query: 185 TMQGHDHNVTGVAFLPN-SDFVLSASRDKTIKMWEVA---TGYCV--KTLTGHREWVRQI 238
T++GH VT +A P D +LSASRDK+I MW++ T Y + ++L GH +V +
Sbjct: 10 TLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDV 69
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXX 298
+S DG S + D T R+W L T T GH V VA++
Sbjct: 70 VISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFS--------------- 114
Query: 299 XXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI--GHDNWVRGVTFHPGGK--YLVSCGD 354
+ +GSRDKTIKLW+ G +T+ GH WV V F P +VSCG
Sbjct: 115 ---ADNRQIVSGSRDKTIKLWNT-LGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGW 170
Query: 355 DKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
DK ++VW+ AN + +KT H+ ++ ++ +G D +W+
Sbjct: 171 DKMVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWD 220
Score = 235 (87.8 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 59/169 (34%), Positives = 84/169 (49%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ +L GH V V+ S + D T+RLWD TG R GH V +AF
Sbjct: 55 PQR-SLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAF 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ--GHDHNVTGVAFLPNSD--FVLSASRDK 212
+ +VS S D ++KLW+ + C T+Q GH V+ V F PNS ++S DK
Sbjct: 114 SADNRQIVSGSRDKTIKLWN-TLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDK 172
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+K+W +A GH ++ + VSPDG+L AS D A +W L
Sbjct: 173 MVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 57/226 (25%), Positives = 94/226 (41%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWD-YETGEYERALHGHLDSVQDIAF--DQSG 160
GH V+ V F + S S D TI+LW+ +Y GH + V + F + S
Sbjct: 103 GHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSN 162
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D +K+W+++ + LKT GH + V P+ S +D +W++
Sbjct: 163 PIIVSCGWDKMVKVWNLANCK-LKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL 221
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL + + + SP+ L + + + ++W L K ELR +
Sbjct: 222 NEGKHLYTLDSG-DVINALCFSPNRYWLCAATGP-SIKIWDLEGKIIVDELRQEVISTNS 279
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
A P S + S L G D I++W V G+
Sbjct: 280 KAEPPQCTSLAWSADGQT---------LFAGYTDNLIRVWQVTIGT 316
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 250 (93.1 bits), Expect = 7.2e-19, P = 7.2e-19
Identities = 76/271 (28%), Positives = 129/271 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K L+GH V+ + + ++ + S D+T+R+WD TGE L H ++V + F+
Sbjct: 295 KRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 352
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCL---KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
++V+CS D S+ +WDM++ + + + GH V V F + +++SAS D+TIK
Sbjct: 353 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 408
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W +T V+TL GH+ + ++ L+ S S+D+T R+W + L GH+
Sbjct: 409 VWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 466
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLIGHD 334
V C+ + ++ I A A R +G+L L TL+ H
Sbjct: 467 LVRCIRFD----NKRIVSGAYDGKIKVWDLVAALDPR--------APAGTLCLRTLVEHS 514
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
V + F +VS D T+ +WD N
Sbjct: 515 GRVFRLQFDEF--QIVSSSHDDTILIWDFLN 543
Score = 220 (82.5 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 48/159 (30%), Positives = 90/159 (56%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D TI++WD T E +R L GH SV + +D+ +++++ S+D ++++WD++T + L T+
Sbjct: 281 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTL 338
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV---KTLTGHREWVRQIKVSPD 243
H V + F N+ +++ S+D++I +W++A+ + + L GHR V + D
Sbjct: 339 IHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 394
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ S S D T +VW+ +T E L GH + C+ +
Sbjct: 395 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 433
Score = 172 (65.6 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+++WDV +G +L TLI H V + F+ G +V+C D+++ VWD A+
Sbjct: 315 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASP 372
Query: 367 RNM---KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ + L H V +DF Y+V+ S D+T+KVW
Sbjct: 373 TDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVW 410
Score = 158 (60.7 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 37/122 (30%), Positives = 67/122 (54%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+VS D ++K+WD +T +C + + GH +V + + + +++ S D T+++W+V TG
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 332
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR----GHDHTVE 278
+ TL H E V ++ + +G ++ +CS D + VW +A+ T LR GH V
Sbjct: 333 EMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASP-TDITLRRVLVGHRAAVN 389
Query: 279 CV 280
V
Sbjct: 390 VV 391
Score = 140 (54.3 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ + S D+TIK+W+ + + TL GH + + + + +VS D T+R+WD
Sbjct: 397 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 454
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ LE H V + F +V+G+ D +KVW+
Sbjct: 455 GACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWD 491
Score = 130 (50.8 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT--- 363
+ +GS D TI+LWD+ G+ L L GH+ VR + F K +VS D ++VWD
Sbjct: 438 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAA 495
Query: 364 ------ANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
A ++TL HS V L F +V+ S D T+ +W+
Sbjct: 496 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 540
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +G RD TIK+WD + L GH V + + + +++ D T+RVWD
Sbjct: 275 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTG 332
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H V L F+ +VT S D+++ VW+
Sbjct: 333 EMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWD 368
Score = 103 (41.3 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 195 GVAFLPNSDF-VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
GV L D ++S RD TIK+W+ T C + LTGH V ++ D ++ + S+D
Sbjct: 264 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD 321
Query: 254 HTARVWSLATKETKAELRGHDHTV 277
T RVW + T E L H V
Sbjct: 322 STVRVWDVNTGEMLNTLIHHCEAV 345
Score = 61 (26.5 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
D + S D+T ++W T E K L GH +V C+ +
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 310
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 250 (93.1 bits), Expect = 7.4e-19, P = 7.4e-19
Identities = 76/271 (28%), Positives = 129/271 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K L+GH V+ + + ++ + S D+T+R+WD TGE L H ++V + F+
Sbjct: 300 KRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 357
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCL---KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
++V+CS D S+ +WDM++ + + + GH V V F + +++SAS D+TIK
Sbjct: 358 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 413
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W +T V+TL GH+ + ++ L+ S S+D+T R+W + L GH+
Sbjct: 414 VWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 471
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLIGHD 334
V C+ + ++ I A A R +G+L L TL+ H
Sbjct: 472 LVRCIRFD----NKRIVSGAYDGKIKVWDLVAALDPR--------APAGTLCLRTLVEHS 519
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
V + F +VS D T+ +WD N
Sbjct: 520 GRVFRLQFDEF--QIVSSSHDDTILIWDFLN 548
Score = 220 (82.5 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 48/159 (30%), Positives = 90/159 (56%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D TI++WD T E +R L GH SV + +D+ +++++ S+D ++++WD++T + L T+
Sbjct: 286 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTL 343
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV---KTLTGHREWVRQIKVSPD 243
H V + F N+ +++ S+D++I +W++A+ + + L GHR V + D
Sbjct: 344 IHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 399
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ S S D T +VW+ +T E L GH + C+ +
Sbjct: 400 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 438
Score = 172 (65.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+++WDV +G +L TLI H V + F+ G +V+C D+++ VWD A+
Sbjct: 320 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASP 377
Query: 367 RNM---KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ + L H V +DF Y+V+ S D+T+KVW
Sbjct: 378 TDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVW 415
Score = 161 (61.7 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+VS D ++K+WD ST +C + + GH +V + + + +++ S D T+++W+V TG
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 337
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR----GHDHTVE 278
+ TL H E V ++ + +G ++ +CS D + VW +A+ T LR GH V
Sbjct: 338 EMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASP-TDITLRRVLVGHRAAVN 394
Query: 279 CV 280
V
Sbjct: 395 VV 396
Score = 140 (54.3 bits), Expect = 8.3e-19, Sum P(2) = 8.3e-19
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ + S D+TIK+W+ + + TL GH + + + + +VS D T+R+WD
Sbjct: 402 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 459
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ LE H V + F +V+G+ D +KVW+
Sbjct: 460 GACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWD 496
Score = 130 (50.8 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT--- 363
+ +GS D TI+LWD+ G+ L L GH+ VR + F K +VS D ++VWD
Sbjct: 443 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAA 500
Query: 364 ------ANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
A ++TL HS V L F +V+ S D T+ +W+
Sbjct: 501 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 545
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +G RD TIK+WD + L GH V + + + +++ D T+RVWD
Sbjct: 280 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTG 337
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H V L F+ +VT S D+++ VW+
Sbjct: 338 EMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWD 373
Score = 106 (42.4 bits), Expect = 9.1e-12, Sum P(2) = 9.1e-12
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 195 GVAFLPNSDF-VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
GV L D ++S RD TIK+W+ +T C + LTGH V ++ D ++ + S+D
Sbjct: 269 GVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSD 326
Query: 254 HTARVWSLATKETKAELRGHDHTV 277
T RVW + T E L H V
Sbjct: 327 STVRVWDVNTGEMLNTLIHHCEAV 350
Score = 64 (27.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
D + S D+T ++W +T E K L GH +V C+ +
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY 315
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 91/335 (27%), Positives = 149/335 (44%)
Query: 102 LSGHRSPVIKVIFHPVFS--LMASCSEDATIRLWDYET-----------GEYE---RALH 145
+ GH V+ I P+ + + S S D ++ +WD EY R L
Sbjct: 14 MHGHND-VVTAIATPIDNSPFIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLT 72
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH VQD+ G+ +S S D L+LWD+ST + GHD +V VAF ++ +
Sbjct: 73 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNRQI 132
Query: 206 LSASRDKTIKMWEVATGYCVKTL-------TGHREWVRQIKVSPDG--TLLASCSNDHTA 256
+SASRD+TIK+W G C T+ GH WV ++ SP+ + S S D T
Sbjct: 133 VSASRDRTIKLWNTL-GECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTV 191
Query: 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTI 316
+VW+L + + L GH V VA +P A+G +D
Sbjct: 192 KVWNLTNCKLRCNLEGHGGYVNAVAVSPD------------------GSLCASGGKDGVT 233
Query: 317 KLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS 376
LWD+ G L++L + + + F P +L + D ++++WD +K ++ L+
Sbjct: 234 LLWDLAEGKRLYSLDA-GSIIHSLCFSPNRYWLCAATQD-SIKIWDLESKHIVQDLKPEI 291
Query: 377 H-------FVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TSL++ + G D T+++++
Sbjct: 292 PVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIYK 326
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 42/168 (25%), Positives = 76/168 (45%)
Query: 104 GHRSPVIKVIFHP-VFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
GH V V F P F + S S D T+++W+ + L GH V +A G
Sbjct: 163 GHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGS 222
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S D LWD++ + L ++ + + F PN ++ +A++D +IK+W++ +
Sbjct: 223 LCASGGKDGVTLLWDLAEGKRLYSLDAGSI-IHSLCFSPNRYWLCAATQD-SIKIWDLES 280
Query: 222 GYCVKTLT-------GHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
+ V+ L + + S DG+ L + D T R++ ++
Sbjct: 281 KHIVQDLKPEIPVSKNQMLYCTSLNWSADGSTLYAGYTDGTIRIYKIS 328
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 292 (107.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 73/268 (27%), Positives = 132/268 (49%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + + +++ + S+ +W+ T +KT + D V F
Sbjct: 6 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ ++V++ + D I+++ T V H +++R I V P + + S+D ++
Sbjct: 66 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 125
Query: 259 WSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K + +++ GH H V + P ++ A+ S D+TIK
Sbjct: 126 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-----------------FASASLDRTIK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W +GS S FTL GH+ V + ++ GG YL+S DD+ +++WD NK ++TLE H
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+ FH P ++TGS D TV++W
Sbjct: 229 AQNVSCASFHPELPIIITGSEDGTVRIW 256
Score = 268 (99.4 bits), Expect = 9.5e-21, P = 9.5e-21
Identities = 69/270 (25%), Positives = 126/270 (46%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HP M + + ++ +W++ET + V+ F +V
Sbjct: 14 RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY- 223
+ + DM +++++ +T + + + H + +A P F+L++S D IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 133
Query: 224 CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C + GH +V QI ++P D AS S D T +VW L + L GH+ V C+ +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G YL +G+ D+ +K+WD + + + TL GH V +F
Sbjct: 194 YSG----------------GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
HP +++ +D T+R+W ++ R TL
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Score = 209 (78.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + + HP + + S+D I+LWD++ + GH V I + +
Sbjct: 98 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
S S D ++K+W + + T++GH+ V + + D +++S + D+ +K+W+
Sbjct: 158 FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V P+ ++ + S D T R+W +T ++ L V CV
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 281 A 281
A
Sbjct: 278 A 278
Score = 175 (66.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 104 GHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK- 161
GH V++++ +P + AS S D TI++W + L GH V I + G
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDK 199
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
L+S + D +K+WD C++T++GH NV+ +F P +++ S D T+++W +
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSS 259
Query: 221 TGYCVKTLT-G-HREW 234
T TL G R W
Sbjct: 260 TYRLESTLNYGMERVW 275
Score = 156 (60.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 54/227 (23%), Positives = 93/227 (40%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ + V V P ++L++ + ++ +W T VKT VR K
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 68
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
+ + ++D RV++ T E H + C+A P
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP------------------T 110
Query: 304 XXYLATGSRDKTIKLWDVG---SGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359
++ T S D IKLWD S S +F GH ++V + +P S D+T++
Sbjct: 111 QPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
VW + TLE H V +D++ PY+++G+ D+ VK+W+
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 52 (23.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ +P G+++V CGD + + ++ RN K+ + F + H + Y + S +
Sbjct: 358 IQHNPNGRFVVVCGDGEYI-IYTAMALRN-KSFGSAQEFAWA---HDSSEYAIRES-NSI 411
Query: 400 VKVWE 404
VK+++
Sbjct: 412 VKIFK 416
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 292 (107.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 73/268 (27%), Positives = 132/268 (49%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + + +++ + S+ +W+ T +KT + D V F
Sbjct: 6 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ ++V++ + D I+++ T V H +++R I V P + + S+D ++
Sbjct: 66 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 125
Query: 259 WSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K + +++ GH H V + P ++ A+ S D+TIK
Sbjct: 126 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-----------------FASASLDRTIK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W +GS S FTL GH+ V + ++ GG YL+S DD+ +++WD NK ++TLE H
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+ FH P ++TGS D TV++W
Sbjct: 229 AQNVSCASFHPELPIIITGSEDGTVRIW 256
Score = 268 (99.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 69/270 (25%), Positives = 126/270 (46%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HP M + + ++ +W++ET + V+ F +V
Sbjct: 14 RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY- 223
+ + DM +++++ +T + + + H + +A P F+L++S D IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 133
Query: 224 CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C + GH +V QI ++P D AS S D T +VW L + L GH+ V C+ +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G YL +G+ D+ +K+WD + + + TL GH V +F
Sbjct: 194 YSG----------------GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
HP +++ +D T+R+W ++ R TL
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Score = 209 (78.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + + HP + + S+D I+LWD++ + GH V I + +
Sbjct: 98 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
S S D ++K+W + + T++GH+ V + + D +++S + D+ +K+W+
Sbjct: 158 FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V P+ ++ + S D T R+W +T ++ L V CV
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 281 A 281
A
Sbjct: 278 A 278
Score = 175 (66.7 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 104 GHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK- 161
GH V++++ +P + AS S D TI++W + L GH V I + G
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDK 199
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
L+S + D +K+WD C++T++GH NV+ +F P +++ S D T+++W +
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSS 259
Query: 221 TGYCVKTLT-G-HREW 234
T TL G R W
Sbjct: 260 TYRLESTLNYGMERVW 275
Score = 156 (60.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 54/227 (23%), Positives = 93/227 (40%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ + V V P ++L++ + ++ +W T VKT VR K
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 68
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
+ + ++D RV++ T E H + C+A P
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP------------------T 110
Query: 304 XXYLATGSRDKTIKLWDVG---SGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359
++ T S D IKLWD S S +F GH ++V + +P S D+T++
Sbjct: 111 QPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
VW + TLE H V +D++ PY+++G+ D+ VK+W+
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 53 (23.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ +P G+++V CGD + + ++ RN K+ + F + H + Y + S +
Sbjct: 358 IQHNPNGRFVVVCGDGEYI-IYTAMALRN-KSFGSAQEFAWA---HDSSEYAIRES-NSV 411
Query: 400 VKVWE 404
VK+++
Sbjct: 412 VKIFK 416
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 292 (107.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 73/268 (27%), Positives = 132/268 (49%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + + +++ + S+ +W+ T +KT + D V F
Sbjct: 6 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ ++V++ + D I+++ T V H +++R I V P + + S+D ++
Sbjct: 66 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 125
Query: 259 WSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K + +++ GH H V + P ++ A+ S D+TIK
Sbjct: 126 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-----------------FASASLDRTIK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W +GS S FTL GH+ V + ++ GG YL+S DD+ +++WD NK ++TLE H
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+ FH P ++TGS D TV++W
Sbjct: 229 AQNVSCASFHPELPIIITGSEDGTVRIW 256
Score = 268 (99.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 69/270 (25%), Positives = 126/270 (46%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HP M + + ++ +W++ET + V+ F +V
Sbjct: 14 RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY- 223
+ + DM +++++ +T + + + H + +A P F+L++S D IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 133
Query: 224 CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C + GH +V QI ++P D AS S D T +VW L + L GH+ V C+ +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G YL +G+ D+ +K+WD + + + TL GH V +F
Sbjct: 194 YSG----------------GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
HP +++ +D T+R+W ++ R TL
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Score = 209 (78.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + + HP + + S+D I+LWD++ + GH V I + +
Sbjct: 98 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
S S D ++K+W + + T++GH+ V + + D +++S + D+ +K+W+
Sbjct: 158 FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V P+ ++ + S D T R+W +T ++ L V CV
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 281 A 281
A
Sbjct: 278 A 278
Score = 175 (66.7 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 104 GHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK- 161
GH V++++ +P + AS S D TI++W + L GH V I + G
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDK 199
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
L+S + D +K+WD C++T++GH NV+ +F P +++ S D T+++W +
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSS 259
Query: 221 TGYCVKTLT-G-HREW 234
T TL G R W
Sbjct: 260 TYRLESTLNYGMERVW 275
Score = 156 (60.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 54/227 (23%), Positives = 93/227 (40%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ + V V P ++L++ + ++ +W T VKT VR K
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 68
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
+ + ++D RV++ T E H + C+A P
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP------------------T 110
Query: 304 XXYLATGSRDKTIKLWDVG---SGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359
++ T S D IKLWD S S +F GH ++V + +P S D+T++
Sbjct: 111 QPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
VW + TLE H V +D++ PY+++G+ D+ VK+W+
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 53 (23.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ +P G+++V CGD + + ++ RN K+ + F + H + Y + S +
Sbjct: 358 IQHNPNGRFVVVCGDGEYI-IYTAMALRN-KSFGSAQEFAWA---HDSSEYAIRES-NSV 411
Query: 400 VKVWE 404
VK+++
Sbjct: 412 VKIFK 416
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 292 (107.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 73/268 (27%), Positives = 132/268 (49%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + + +++ + S+ +W+ T +KT + D V F
Sbjct: 6 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ ++V++ + D I+++ T V H +++R I V P + + S+D ++
Sbjct: 66 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 125
Query: 259 WSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K + +++ GH H V + P ++ A+ S D+TIK
Sbjct: 126 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-----------------FASASLDRTIK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W +GS S FTL GH+ V + ++ GG YL+S DD+ +++WD NK ++TLE H
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+ FH P ++TGS D TV++W
Sbjct: 229 AQNVSCASFHPELPIIITGSEDGTVRIW 256
Score = 268 (99.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 69/270 (25%), Positives = 126/270 (46%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HP M + + ++ +W++ET + V+ F +V
Sbjct: 14 RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY- 223
+ + DM +++++ +T + + + H + +A P F+L++S D IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 133
Query: 224 CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C + GH +V QI ++P D AS S D T +VW L + L GH+ V C+ +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G YL +G+ D+ +K+WD + + + TL GH V +F
Sbjct: 194 YSG----------------GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
HP +++ +D T+R+W ++ R TL
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Score = 209 (78.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + + HP + + S+D I+LWD++ + GH V I + +
Sbjct: 98 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
S S D ++K+W + + T++GH+ V + + D +++S + D+ +K+W+
Sbjct: 158 FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V P+ ++ + S D T R+W +T ++ L V CV
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 281 A 281
A
Sbjct: 278 A 278
Score = 175 (66.7 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 104 GHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK- 161
GH V++++ +P + AS S D TI++W + L GH V I + G
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDK 199
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
L+S + D +K+WD C++T++GH NV+ +F P +++ S D T+++W +
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSS 259
Query: 221 TGYCVKTLT-G-HREW 234
T TL G R W
Sbjct: 260 TYRLESTLNYGMERVW 275
Score = 156 (60.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 54/227 (23%), Positives = 93/227 (40%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ + V V P ++L++ + ++ +W T VKT VR K
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 68
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
+ + ++D RV++ T E H + C+A P
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP------------------T 110
Query: 304 XXYLATGSRDKTIKLWDVG---SGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359
++ T S D IKLWD S S +F GH ++V + +P S D+T++
Sbjct: 111 QPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
VW + TLE H V +D++ PY+++G+ D+ VK+W+
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 53 (23.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ +P G+++V CGD + + ++ RN K+ + F + H + Y + S +
Sbjct: 358 IQHNPNGRFVVVCGDGEYI-IYTAMALRN-KSFGSAQEFAWA---HDSSEYAIRES-NSV 411
Query: 400 VKVWE 404
VK+++
Sbjct: 412 VKIFK 416
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 292 (107.8 bits), Expect = 1.3e-24, P = 1.3e-24
Identities = 73/268 (27%), Positives = 132/268 (49%)
Query: 139 EYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAF 198
+ +R L D V+ + + +++ + S+ +W+ T +KT + D V F
Sbjct: 6 DIKRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKF 65
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ ++V++ + D I+++ T V H +++R I V P + + S+D ++
Sbjct: 66 VARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKL 125
Query: 259 WSLATKETKAEL-RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIK 317
W K + +++ GH H V + P ++ A+ S D+TIK
Sbjct: 126 WDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ-----------------FASASLDRTIK 168
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAH 375
+W +GS S FTL GH+ V + ++ GG YL+S DD+ +++WD NK ++TLE H
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGH 228
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ V+ FH P ++TGS D TV++W
Sbjct: 229 AQNVSCASFHPELPIIITGSEDGTVRIW 256
Score = 268 (99.4 bits), Expect = 9.6e-21, P = 9.6e-21
Identities = 69/270 (25%), Positives = 126/270 (46%)
Query: 106 RSPVIKVI-FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS +K + HP M + + ++ +W++ET + V+ F +V
Sbjct: 14 RSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVV 73
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY- 223
+ + DM +++++ +T + + + H + +A P F+L++S D IK+W+ +
Sbjct: 74 TGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWS 133
Query: 224 CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
C + GH +V QI ++P D AS S D T +VW L + L GH+ V C+ +
Sbjct: 134 CSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDY 193
Query: 283 APGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF 342
G YL +G+ D+ +K+WD + + + TL GH V +F
Sbjct: 194 YSG----------------GDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASF 237
Query: 343 HPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
HP +++ +D T+R+W ++ R TL
Sbjct: 238 HPELPIIITGSEDGTVRIWHSSTYRLESTL 267
Score = 209 (78.6 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 46/181 (25%), Positives = 85/181 (46%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETG-EYERALHGHLDSVQDIAFD-QSGKL 162
H + + HP + + S+D I+LWD++ + GH V I + +
Sbjct: 98 HSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQ 157
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD--FVLSASRDKTIKMWEVA 220
S S D ++K+W + + T++GH+ V + + D +++S + D+ +K+W+
Sbjct: 158 FASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQ 217
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
CV+TL GH + V P+ ++ + S D T R+W +T ++ L V CV
Sbjct: 218 NKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCV 277
Query: 281 A 281
A
Sbjct: 278 A 278
Score = 175 (66.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/136 (30%), Positives = 68/136 (50%)
Query: 104 GHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK- 161
GH V++++ +P + AS S D TI++W + L GH V I + G
Sbjct: 140 GHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDK 199
Query: 162 -LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
L+S + D +K+WD C++T++GH NV+ +F P +++ S D T+++W +
Sbjct: 200 PYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSS 259
Query: 221 TGYCVKTLT-G-HREW 234
T TL G R W
Sbjct: 260 TYRLESTLNYGMERVW 275
Score = 156 (60.0 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 54/227 (23%), Positives = 93/227 (40%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ + V V P ++L++ + ++ +W T VKT VR K
Sbjct: 9 RKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVAR 68
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXX 303
+ + ++D RV++ T E H + C+A P
Sbjct: 69 KNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHP------------------T 110
Query: 304 XXYLATGSRDKTIKLWDVG---SGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLR 359
++ T S D IKLWD S S +F GH ++V + +P S D+T++
Sbjct: 111 QPFILTSSDDMLIKLWDWDKKWSCSQVFE--GHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
VW + TLE H V +D++ PY+++G+ D+ VK+W+
Sbjct: 169 VWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWD 215
Score = 52 (23.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 15/65 (23%), Positives = 33/65 (50%)
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
+ +P G+++V CGD + + ++ RN K+ + F + H + Y + S +
Sbjct: 358 IQHNPNGRFVVVCGDGEYI-IYTAMALRN-KSFGSAQEFAWA---HDSSEYAIRES-NSI 411
Query: 400 VKVWE 404
VK+++
Sbjct: 412 VKIFK 416
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 250 (93.1 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 76/271 (28%), Positives = 129/271 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K L+GH V+ + + ++ + S D+T+R+WD TGE L H ++V + F+
Sbjct: 336 KRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 393
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCL---KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
++V+CS D S+ +WDM++ + + + GH V V F + +++SAS D+TIK
Sbjct: 394 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 449
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W +T V+TL GH+ + ++ L+ S S+D+T R+W + L GH+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLIGHD 334
V C+ + ++ I A A R +G+L L TL+ H
Sbjct: 508 LVRCIRFD----NKRIVSGAYDGKIKVWDLVAALDPR--------APAGTLCLRTLVEHS 555
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
V + F +VS D T+ +WD N
Sbjct: 556 GRVFRLQFDEF--QIVSSSHDDTILIWDFLN 584
Score = 220 (82.5 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 48/159 (30%), Positives = 90/159 (56%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D TI++WD T E +R L GH SV + +D+ +++++ S+D ++++WD++T + L T+
Sbjct: 322 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTL 379
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV---KTLTGHREWVRQIKVSPD 243
H V + F N+ +++ S+D++I +W++A+ + + L GHR V + D
Sbjct: 380 IHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 435
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ S S D T +VW+ +T E L GH + C+ +
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Score = 172 (65.6 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+++WDV +G +L TLI H V + F+ G +V+C D+++ VWD A+
Sbjct: 356 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASP 413
Query: 367 RNM---KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ + L H V +DF Y+V+ S D+T+KVW
Sbjct: 414 TDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVW 451
Score = 161 (61.7 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+VS D ++K+WD ST +C + + GH +V + + + +++ S D T+++W+V TG
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 373
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR----GHDHTVE 278
+ TL H E V ++ + +G ++ +CS D + VW +A+ T LR GH V
Sbjct: 374 EMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASP-TDITLRRVLVGHRAAVN 430
Query: 279 CV 280
V
Sbjct: 431 VV 432
Score = 140 (54.3 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ + S D+TIK+W+ + + TL GH + + + + +VS D T+R+WD
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 495
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ LE H V + F +V+G+ D +KVW+
Sbjct: 496 GACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWD 532
Score = 130 (50.8 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT--- 363
+ +GS D TI+LWD+ G+ L L GH+ VR + F K +VS D ++VWD
Sbjct: 479 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAA 536
Query: 364 ------ANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
A ++TL HS V L F +V+ S D T+ +W+
Sbjct: 537 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 581
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +G RD TIK+WD + L GH V + + + +++ D T+RVWD
Sbjct: 316 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTG 373
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H V L F+ +VT S D+++ VW+
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWD 409
Score = 106 (42.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 195 GVAFLPNSDF-VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
GV L D ++S RD TIK+W+ +T C + LTGH V ++ D ++ + S+D
Sbjct: 305 GVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSD 362
Query: 254 HTARVWSLATKETKAELRGHDHTV 277
T RVW + T E L H V
Sbjct: 363 STVRVWDVNTGEMLNTLIHHCEAV 386
Score = 64 (27.6 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
D + S D+T ++W +T E K L GH +V C+ +
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY 351
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 250 (93.1 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 76/271 (28%), Positives = 129/271 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K L+GH V+ + + ++ + S D+T+R+WD TGE L H ++V + F+
Sbjct: 336 KRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN 393
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCL---KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
++V+CS D S+ +WDM++ + + + GH V V F + +++SAS D+TIK
Sbjct: 394 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 449
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W +T V+TL GH+ + ++ L+ S S+D+T R+W + L GH+
Sbjct: 450 VWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 507
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLIGHD 334
V C+ + ++ I A A R +G+L L TL+ H
Sbjct: 508 LVRCIRFD----NKRIVSGAYDGKIKVWDLVAALDPR--------APAGTLCLRTLVEHS 555
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
V + F +VS D T+ +WD N
Sbjct: 556 GRVFRLQFDEF--QIVSSSHDDTILIWDFLN 584
Score = 220 (82.5 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 48/159 (30%), Positives = 90/159 (56%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D TI++WD T E +R L GH SV + +D+ +++++ S+D ++++WD++T + L T+
Sbjct: 322 DNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTGEMLNTL 379
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV---KTLTGHREWVRQIKVSPD 243
H V + F N+ +++ S+D++I +W++A+ + + L GHR V + D
Sbjct: 380 IHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 435
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ S S D T +VW+ +T E L GH + C+ +
Sbjct: 436 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 474
Score = 172 (65.6 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+++WDV +G +L TLI H V + F+ G +V+C D+++ VWD A+
Sbjct: 356 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASP 413
Query: 367 RNM---KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ + L H V +DF Y+V+ S D+T+KVW
Sbjct: 414 TDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVW 451
Score = 158 (60.7 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 37/122 (30%), Positives = 67/122 (54%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+VS D ++K+WD +T +C + + GH +V + + + +++ S D T+++W+V TG
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTG 373
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR----GHDHTVE 278
+ TL H E V ++ + +G ++ +CS D + VW +A+ T LR GH V
Sbjct: 374 EMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASP-TDITLRRVLVGHRAAVN 430
Query: 279 CV 280
V
Sbjct: 431 VV 432
Score = 140 (54.3 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ + S D+TIK+W+ + + TL GH + + + + +VS D T+R+WD
Sbjct: 438 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 495
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ LE H V + F +V+G+ D +KVW+
Sbjct: 496 GACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWD 532
Score = 130 (50.8 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT--- 363
+ +GS D TI+LWD+ G+ L L GH+ VR + F K +VS D ++VWD
Sbjct: 479 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAA 536
Query: 364 ------ANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
A ++TL HS V L F +V+ S D T+ +W+
Sbjct: 537 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 581
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +G RD TIK+WD + L GH V + + + +++ D T+RVWD
Sbjct: 316 IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNTG 373
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H V L F+ +VT S D+++ VW+
Sbjct: 374 EMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWD 409
Score = 103 (41.3 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 30/84 (35%), Positives = 42/84 (50%)
Query: 195 GVAFLPNSDF-VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
GV L D ++S RD TIK+W+ T C + LTGH V ++ D ++ + S+D
Sbjct: 305 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD 362
Query: 254 HTARVWSLATKETKAELRGHDHTV 277
T RVW + T E L H V
Sbjct: 363 STVRVWDVNTGEMLNTLIHHCEAV 386
Score = 61 (26.5 bits), Expect = 9.0e-12, Sum P(2) = 9.0e-12
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
D + S D+T ++W T E K L GH +V C+ +
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY 351
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 234 (87.4 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 76/304 (25%), Positives = 133/304 (43%)
Query: 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVS 165
R +++++ P + + + + I L+ T ++ G+ D V D+ F ++
Sbjct: 302 RLGLLQLLLLPRTGRLITVTAEHNILLYQTPTLAVQQQFVGYNDDVLDVKFVGKDDTHIA 361
Query: 166 CSADMS-LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW--EVATG 222
+ + S LK++++ST C + + GH + + + ++DK++++W +V++G
Sbjct: 362 VATNSSQLKVFELSTNSC-QILHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSG 420
Query: 223 --YCVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
+CV TGH V I S + S S D T +VW L E G + +
Sbjct: 421 RVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWDLP------ETTGAEGVMMM 474
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339
A + A E + LA+GS+D+T KLW + LL GH V
Sbjct: 475 KARSTERAHE---KDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWS 531
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT 399
V F P + L S D ++R+W + +KT E H V + F +V+ D
Sbjct: 532 VQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGL 591
Query: 400 VKVW 403
VK+W
Sbjct: 592 VKLW 595
Score = 233 (87.1 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 50/162 (30%), Positives = 80/162 (49%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V V P L+AS S+D T +LW GH V + F ++L
Sbjct: 483 HEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILG 542
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
S SAD S+++W + + CLKT +GHD +V + F+ ++S+ D +K+W + T C
Sbjct: 543 SASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNEC 602
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKET 266
V+TL H++ V + L+ + S D T VW+ ++T
Sbjct: 603 VRTLDAHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKT 644
Score = 226 (84.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 72/276 (26%), Positives = 127/276 (46%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLW--DYETGEYERALHG--HLDSVQDIAFD 157
L GH ++ + S+ A+C++D ++R+W D +G G H ++V IA
Sbjct: 382 LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDVSSGRVHCVAQGTGHSNAVGSIACS 441
Query: 158 Q-SGKLLVSCSADMSLKLWDM--ST----YQCLK---TMQGHDHNVTGVAFLPNSDFVLS 207
+ + +VS S D ++K+WD+ +T +K T + H+ +V V PN + S
Sbjct: 442 RMKQQFVVSGSQDCTVKVWDLPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLAS 501
Query: 208 ASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
S+D+T K+W ++ + GHR V ++ SP +L S S D + R+WS+
Sbjct: 502 GSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCL 561
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLL 327
GHD +V + + +S +++GS D +KLW + + +
Sbjct: 562 KTFEGHDASVLKIIF--------VSRGTQL---------VSSGS-DGLVKLWTIKTNECV 603
Query: 328 FTLIGHDNWVRGVTFHPG--GKYLVSCGDDKTLRVW 361
TL H + V + H G + +V+ D T+ VW
Sbjct: 604 RTLDAHQDKVWAL--HGGCRDELMVTGSADSTITVW 637
Score = 208 (78.3 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 61/217 (28%), Positives = 95/217 (43%)
Query: 116 PVFSLMASCSEDATIRLWDYETGEYERALHG-HLDSVQDIAFDQSGKLLVSCSADMSLKL 174
P ++ S S +R WD++ + R+ H V ++FD + LL + D ++KL
Sbjct: 73 PDDEMLVSASRALLLRQWDWKQQQCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKL 132
Query: 175 WDMSTYQCLKTMQGHDHNVTGVAFLPN-SDFVL-SASRDKTIKMWEVATGYCVKTLTGHR 232
WD+ C ++G V V F P+ S L S+S D I++W++ + CV L H
Sbjct: 133 WDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHY 192
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292
V + SPDG L S D VW L ++ K + ++ VE V G S S
Sbjct: 193 SPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVYE-AVEGVVLLSG--SADYS 249
Query: 293 EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFT 329
E +L T +++WD S +FT
Sbjct: 250 EMGVKSDAL----HLVTAGSKGVLRVWDSSSSRCVFT 282
Score = 193 (73.0 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 78/318 (24%), Positives = 140/318 (44%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF--DQSGKL 162
H PV + F +L+A+ D TI+LWD L G V + F D S
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L S S+D ++++WD+ + +C+ ++ H VT +AF P+ ++S+ RDK +W++
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQ 224
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR-VWS----LATKETKAELRGHDHTV 277
+T+ + + +G +L S S D++ V S L T +K LR D +
Sbjct: 225 KVKRTIPVYE--------AVEGVVLLSGSADYSEMGVKSDALHLVTAGSKGVLRVWDSSS 276
Query: 278 E-CV--AWAPGVASESISEAAXXXXXXXXXXYLA---TG-----SRDKTIKLWDVGSGSL 326
CV P +S + E A L TG + + I L+ + ++
Sbjct: 277 SRCVFTQTLPDASSHTEDEDAEDEERLGLLQLLLLPRTGRLITVTAEHNILLYQTPTLAV 336
Query: 327 LFTLIGHDNWVRGVTF-HPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
+G+++ V V F ++ + L+V++ + + + L H+ + S+D
Sbjct: 337 QQQFVGYNDDVLDVKFVGKDDTHIAVATNSSQLKVFELSTN-SCQILHGHTDTILSIDVF 395
Query: 386 RAHPYVVTGSVDKTVKVW 403
R T + DK+V+VW
Sbjct: 396 RKGSMFATCAKDKSVRVW 413
Score = 189 (71.6 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 67/262 (25%), Positives = 112/262 (42%)
Query: 124 CSEDATIRLWDYETGEYERALHGH-LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQC 182
C+ I + TG+ ++ + + A ++LVS S + L+ WD QC
Sbjct: 38 CTYGPKINILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQC 97
Query: 183 LKTMQG-HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241
++ + H V ++F S + + D TIK+W+V YC L G V ++
Sbjct: 98 RRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFH 157
Query: 242 PDGTLLA--SCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXX 299
PD + L S S+D R+W L + L H V +A++P +S
Sbjct: 158 PDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPD-GHTLVSSGRDKIC 216
Query: 300 XXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR-GVTFHPGGKYLVSCGDDKTL 358
L +TI +++ G +L L G ++ GV +LV+ G L
Sbjct: 217 SVWD---LQEQKVKRTIPVYEAVEGVVL--LSGSADYSEMGVK--SDALHLVTAGSKGVL 269
Query: 359 RVWDTANKRNM--KTL-EAHSH 377
RVWD+++ R + +TL +A SH
Sbjct: 270 RVWDSSSSRCVFTQTLPDASSH 291
Score = 171 (65.3 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 50/214 (23%), Positives = 93/214 (43%)
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDH-NVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+ C+ + + +ST + + +++ D ++T A P+ + ++SASR ++ W+
Sbjct: 36 IFCTYGPKINILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQ 95
Query: 223 YCVKTLTG-HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
C ++ H V + TLLA+ D T ++W + + L+G V V
Sbjct: 96 QCRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVE 155
Query: 282 WAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341
+ P ++ L + S D I++WD+ S + L H + V +
Sbjct: 156 FHPDISR----------------LQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALA 199
Query: 342 FHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
F P G LVS G DK VWD ++ +T+ +
Sbjct: 200 FSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVY 233
Score = 159 (61.0 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 60/195 (30%), Positives = 83/195 (42%)
Query: 214 IKMWEVATGYCVKTLTGH-REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
I + +++TG + ++ +E + +SPD +L S S R W ++ + R
Sbjct: 44 INILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQWDWKQQQCRRSWRA 103
Query: 273 HDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG 332
H+V P VAS S LATG D TIKLWDV L G
Sbjct: 104 V-HSV------P-VASMSFD---------CTSTLLATGGCDGTIKLWDVIKQYCTHNLKG 146
Query: 333 HDNWVRGVTFHP--GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR-AHP 389
V V FHP L S D +R+WD + R + LE+H VT+L F H
Sbjct: 147 SSGVVHLVEFHPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHT 206
Query: 390 YVVTGSVDKTVKVWE 404
V +G DK VW+
Sbjct: 207 LVSSGR-DKICSVWD 220
Score = 149 (57.5 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L + S D ++++W + S L T GHD V + F G LVS G D +++W
Sbjct: 541 LGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTN 600
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++TL+AH V +L +VTGS D T+ VW
Sbjct: 601 ECVRTLDAHQDKVWALHGGCRDELMVTGSADSTITVW 637
Score = 114 (45.2 bits), Expect = 6.4e-21, Sum P(2) = 6.4e-21
Identities = 30/104 (28%), Positives = 53/104 (50%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW--DT 363
++A + +K++++ + S L GH + + + G +C DK++RVW D
Sbjct: 359 HIAVATNSSQLKVFELSTNSCQI-LHGHTDTILSIDVFRKGSMFATCAKDKSVRVWRMDV 417
Query: 364 ANKRNMKTLEA--HSHFVTSLDFHRA-HPYVVTGSVDKTVKVWE 404
++ R + HS+ V S+ R +VV+GS D TVKVW+
Sbjct: 418 SSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWD 461
Score = 68 (29.0 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 24/96 (25%), Positives = 44/96 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF----- 156
L H SPV + F P + S D +WD + + +R + + ++V+ +
Sbjct: 188 LESHYSPVTALAFSPDGHTLVSSGRDKICSVWDLQEQKVKRTIPVY-EAVEGVVLLSGSA 246
Query: 157 D------QSGKL-LVSCSADMSLKLWDMSTYQCLKT 185
D +S L LV+ + L++WD S+ +C+ T
Sbjct: 247 DYSEMGVKSDALHLVTAGSKGVLRVWDSSSSRCVFT 282
>RGD|1307480 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307480 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH474015 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD
CTD:10885 OrthoDB:EOG412M4S IPI:IPI00201140 RefSeq:NP_001101175.1
UniGene:Rn.12973 Ensembl:ENSRNOT00000026726 GeneID:310720
KEGG:rno:310720 NextBio:662507 Uniprot:D4A106
Length = 942
Score = 215 (80.7 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 49/159 (30%), Positives = 87/159 (54%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV--QDIAFDQSGKLLVSC 166
V+ V + P L+A D T++++ +T ++ +L+GH V DI+ D G L+ +
Sbjct: 551 VLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISHD--GALIATG 608
Query: 167 SADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK 226
SAD ++K+W + C +++ HD +V + F+P S +A +D IK W+ ++
Sbjct: 609 SADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDADKFEHIQ 668
Query: 227 TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
TL GH + + + VSP G + S S+D + R+W T+E
Sbjct: 669 TLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE-RTRE 706
Score = 209 (78.6 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 41/122 (33%), Positives = 70/122 (57%)
Query: 99 KFALS--GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
KF LS GH+ PVI + +L+A+ S D +++W + G+ R+L H DSV + F
Sbjct: 581 KFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRF 640
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
L + D +K WD ++ ++T++GH + +A P+ D+V+SAS DK++++
Sbjct: 641 VPKSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRL 700
Query: 217 WE 218
WE
Sbjct: 701 WE 702
Score = 200 (75.5 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 50/172 (29%), Positives = 82/172 (47%)
Query: 92 WIPRAPEKFA-LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W R EK L G + V + P +A ED IR++ +GE +GH +
Sbjct: 50 WDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAA 109
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
V + +DQ G L S S D + +WD+ L ++GH VT FL + ++++ +
Sbjct: 110 VTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGK 169
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLA 262
D +K W++ +C KT+ GHR V + + + T L + + D R W +A
Sbjct: 170 DTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIA 221
Score = 183 (69.5 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 61/249 (24%), Positives = 105/249 (42%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDM------- 177
++ ++L+D +G + H ++ ++ + V+ AD ++K WD
Sbjct: 472 TKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKN 531
Query: 178 STYQCLKTMQGH----DHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
ST + L Q D +V V + P+ + + D T+K++ V T +L GH+
Sbjct: 532 STQKRLSVKQTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKL 591
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISE 293
V + +S DG L+A+ S D ++W L + L HD +V + + P
Sbjct: 592 PVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVP--------- 642
Query: 294 AAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCG 353
T +D IK WD + TL GH + + P G Y+VS
Sbjct: 643 ---------KSHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSAS 693
Query: 354 DDKTLRVWD 362
DK+LR+W+
Sbjct: 694 HDKSLRLWE 702
Score = 163 (62.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/262 (20%), Positives = 112/262 (42%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
GH V+ ++F ++S +A+ S+K+W+ ST QC++TM ++ + F+P V
Sbjct: 412 GHRSDVRTLSFSSDNIAVLSAAAE-SVKIWNRSTLQCIRTMPC-EYALCSF-FVPGDRQV 468
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS--LAT 263
+ ++ ++++++A+G ++T+ H + + +SPD + D + W L T
Sbjct: 469 VIGTKTGNMQLYDLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVT 528
Query: 264 KETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGS 323
+ + R + + E LA D T+K++ V +
Sbjct: 529 DKNSTQKRLSVKQTRIL---------QLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDT 579
Query: 324 GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLD 383
+L GH V + G + + D+ +++W ++L AH V L
Sbjct: 580 LKFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLR 639
Query: 384 F-HRAHPYVVTGSVDKTVKVWE 404
F ++H + G D +K W+
Sbjct: 640 FVPKSHLFFTAGK-DHKIKQWD 660
Score = 158 (60.7 bits), Expect = 1.6e-24, Sum P(2) = 1.6e-24
Identities = 31/98 (31%), Positives = 52/98 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ATGS D+ +K+W + G +L HD+ V + F P + G D ++ WD
Sbjct: 605 IATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWDADKF 664
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++TLE H + L + YVV+ S DK++++WE
Sbjct: 665 EHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWE 702
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 31/98 (31%), Positives = 49/98 (50%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LA+GS+D + +WDV + S L+ L GH + V F LV+ G D ++ WD N+
Sbjct: 122 LASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQ 181
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
KT+ H V L ++TG+ D ++ W+
Sbjct: 182 HCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWD 219
Score = 104 (41.7 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 32/142 (22%), Positives = 57/142 (40%)
Query: 132 LWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDH 191
+WD GE L G V + G L D +++++ + + + T GH
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRA 108
Query: 192 NVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
VT + + + S S+D + +W+V + L GH++ V Q + LL +
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSG 168
Query: 252 NDHTARVWSLATKETKAELRGH 273
D + W L + + GH
Sbjct: 169 KDTMVKWWDLDNQHCFKTMVGH 190
Score = 102 (41.0 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 37/173 (21%), Positives = 71/173 (41%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
+ L GH+ V + +F +L+ + +D ++ WD + + + GH V +
Sbjct: 143 YRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDNQHCFKTMVGHRTEVWGLVLVSE 202
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHD----HNVTGVAFLPNS-DFVLSASRDKTI 214
L++ +AD L+ WD++ Q + + + G+ P + D L A +K+
Sbjct: 203 ETRLITGAADSELRAWDIAYLQEIDDPEEPEPKKIKECPGIQDTPEAEDRTLEADDEKS- 261
Query: 215 KMWEVATGYCVKT---LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
E C K + R+ V + V G +LA D V+ + +K
Sbjct: 262 ---EDRILSCRKAGSLMREGRDRVVNLAVDKTGRILACHGTDSVLEVFCILSK 311
Score = 101 (40.6 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 27/104 (25%), Positives = 45/104 (43%)
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
+WD+ + + +QG VT + P+ + D I+++ + +G T GHR
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRA 108
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
V +K G LAS S D +W + + L+GH V
Sbjct: 109 AVTSLKYDQLGGRLASGSKDTDVIIWDVINESGLYRLKGHKDAV 152
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 88/322 (27%), Positives = 146/322 (45%)
Query: 102 LSGHRSPVIKVIFHPVF-SLMASCSEDATIRLW----DYET--GEYERALHGHLDSVQDI 154
L GH V ++ +P + S S D T+ +W D +T G ++ L+GH + D+
Sbjct: 11 LIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDV 70
Query: 155 AFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
G +S S D +L+LWD++ + + +GH +V VAF ++ ++S SRDKTI
Sbjct: 71 VLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTI 130
Query: 215 KMWEVATGYCVKTLT--GHREWVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAEL 270
K+W C T+ GH +WV ++ SP+ + ++ SC D T +VW+LA + K
Sbjct: 131 KLWNTLAE-CKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNH 189
Query: 271 RGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
GH+ + V +P +G +D LWD+ G L+TL
Sbjct: 190 HGHNGYLNTVTVSPD------------------GSLCTSGGKDSKALLWDLNDGKNLYTL 231
Query: 331 IGHDNWVRGVTFHPGGKYL-VSCGDD-KT--LRVWDTANKRNMK----TLEAHSHFVTSL 382
H++ + + F P +L V+ G K L T + + T +A SL
Sbjct: 232 -EHNDIINALCFSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSL 290
Query: 383 DFHRAHPYVVTGSVDKTVKVWE 404
+ + G D T++VW+
Sbjct: 291 AWSTDGQTLFAGYSDNTIRVWQ 312
Score = 196 (74.1 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 58/187 (31%), Positives = 85/187 (45%)
Query: 227 TLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKET------KAELRGHDHTVEC 279
TL GH WV QI +P D + S S D T VW L E + L GH H +
Sbjct: 10 TLIGHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISD 69
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339
V ++S+ Y +GS D+T++LWD+ +G GH V
Sbjct: 70 VV----LSSDG--------------NYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLS 111
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE-AHSHFVTSLDFHRAH--PYVVTGSV 396
V F + +VS DKT+++W+T + E H+ +V+ + F H P +V+
Sbjct: 112 VAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGW 171
Query: 397 DKTVKVW 403
D+TVKVW
Sbjct: 172 DRTVKVW 178
Score = 183 (69.5 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 58/222 (26%), Positives = 96/222 (43%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH--GHLDSVQDIAF--DQS 159
GH V+ V F + S S D TI+LW+ E + + GH D V + F + S
Sbjct: 104 GHTKDVLSVAFSADNRQIVSGSRDKTIKLWN-TLAECKFTIQEDGHTDWVSCVRFSPNHS 162
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
++VSC D ++K+W+++ + GH+ + V P+ S +D +W++
Sbjct: 163 NPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDL 222
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVEC 279
G + TL H + + + SP+ L + ++W LA K+T ELR E
Sbjct: 223 NDGKNLYTLE-HNDIINALCFSPNRYWLCVAYGP-SIKIWDLACKKTVEELRP-----EV 275
Query: 280 VAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDV 321
V+ P S++ L G D TI++W V
Sbjct: 276 VS--P--TSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
Score = 158 (60.7 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 49/184 (26%), Positives = 84/184 (45%)
Query: 92 WIPRAPEKFALS--GHRSPVIKVIFHPVFS--LMASCSEDATIRLWDYETGEYERALHGH 147
W A KF + GH V V F P S ++ SC D T+++W+ + + HGH
Sbjct: 133 WNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGH 192
Query: 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLS 207
+ + G L S D LWD++ + L T++ H+ + + F PN + L
Sbjct: 193 NGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNR-YWLC 250
Query: 208 ASRDKTIKMWEVATGYCVKTL-------TGHREWVRQIKV--SPDGTLLASCSNDHTARV 258
+ +IK+W++A V+ L T + + + + S DG L + +D+T RV
Sbjct: 251 VAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRV 310
Query: 259 WSLA 262
W ++
Sbjct: 311 WQVS 314
Score = 37 (18.1 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 346 GKYLVSCGDDKTLRVWDTA 364
G+ L + D T+RVW +
Sbjct: 296 GQTLFAGYSDNTIRVWQVS 314
>UNIPROTKB|Q5ZMA2 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9031
"Gallus gallus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 GO:GO:0005737 GO:GO:0005654
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 KO:K10599 InterPro:IPR013915
Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339 HOVERGEN:HBG053697
EMBL:AJ719482 IPI:IPI00598799 RefSeq:NP_001034420.1
UniGene:Gga.8361 ProteinModelPortal:Q5ZMA2 STRING:Q5ZMA2
PRIDE:Q5ZMA2 GeneID:430767 KEGG:gga:430767 NextBio:20830569
Uniprot:Q5ZMA2
Length = 505
Score = 285 (105.4 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 77/273 (28%), Positives = 124/273 (45%)
Query: 131 RLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHD 190
R+W G + ++ G L D+ + K+L AD ++ ++D S+ Q L T++GH
Sbjct: 213 RMW----GLHSASIPGIL--ALDLCPSDTNKILTG-GADKNVIVFDKSSEQILATLKGHS 265
Query: 191 HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASC 250
VT V F P+ D V SAS D TI++W V CV+ + H V + + G L S
Sbjct: 266 KKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSS 325
Query: 251 SNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATG 310
S+D + W+ + +T L V ES A TG
Sbjct: 326 SDD---QYWAFSDIQTGRVLTK-------------VTDESSGCALTCAQFHPDGLIFGTG 369
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
+ D IK+WD+ + + GH + + F G YL + DD ++++WD +N K
Sbjct: 370 TMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFK 429
Query: 371 TLEAHSHF-VTSLDFHRAHPYVVTGSVDKTVKV 402
TL+ ++F V SL F ++ Y+ G D + +
Sbjct: 430 TLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYI 462
Score = 208 (78.3 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 57/232 (24%), Positives = 105/232 (45%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D + ++D + + L GH V + F S L+ S S D ++++W + C++ +
Sbjct: 244 DKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVV 303
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW--VRQIKVSPDG 244
+ H+ +VTG++ D++LS+S D+ ++ TG + +T + + PDG
Sbjct: 304 RAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDG 363
Query: 245 TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXX 304
+ + + D ++W L + A GH + +A+ SE+
Sbjct: 364 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAF-----SEN-------------G 405
Query: 305 XYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDD 355
YLAT + D ++KLWD+ TL +N+ V+ + F G YL G D
Sbjct: 406 YYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 457
Score = 187 (70.9 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 46/162 (28%), Positives = 73/162 (45%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V V+FHP L+ S S DATIR+W + + H SV ++ +G
Sbjct: 261 LKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHEGSVTGLSLHATGD 320
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSDFVLSASRDKTIKMWEV 219
L+S S D D+ T + L + +T F P+ + + D IK+W++
Sbjct: 321 YLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIWDL 380
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
V GH + I S +G LA+ ++D + ++W L
Sbjct: 381 KERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 422
Score = 173 (66.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 54/225 (24%), Positives = 103/225 (45%)
Query: 189 HDHNVTGVAFL---PN-SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244
H ++ G+ L P+ ++ +L+ DK + +++ ++ + TL GH + V + P
Sbjct: 218 HSASIPGILALDLCPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQ 277
Query: 245 TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXX 304
L+ S S D T R+WS+ +R H+ +V G++ + +
Sbjct: 278 DLVFSASPDATIRIWSVPNASCVQVVRAHEGSVT------GLSLHATGD----------- 320
Query: 305 XYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT---FHPGGKYLVSCGDDKTLRVW 361
YL + S D+ D+ +G +L T + ++ +T FHP G + D +++W
Sbjct: 321 -YLLSSSDDQYWAFSDIQTGRVL-TKVTDESSGCALTCAQFHPDGLIFGTGTMDSQIKIW 378
Query: 362 DTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
D + N+ HS +TS+ F Y+ T + D +VK+W+ R
Sbjct: 379 DLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 423
Score = 126 (49.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
FHP + + + D+ I++WD + GH + IAF ++G L + + D S+K
Sbjct: 359 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 418
Query: 174 LWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHR 232
LWD+ + KT+Q ++ V + F + ++ D I + + T + T H
Sbjct: 419 LWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTE--ILHFTEHS 476
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+ +AS D + + +SL
Sbjct: 477 GLTTGVAFGHHAKFIASTGMDRSLKFYSL 505
Score = 126 (49.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 41/169 (24%), Positives = 68/169 (40%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W +P A + H V + H + S S+D D +TG R L D
Sbjct: 292 WSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTG---RVLTKVTDE 348
Query: 151 VQDIA-----FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
A F G + + + D +K+WD+ + GH +T +AF N ++
Sbjct: 349 SSGCALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYL 408
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREW-VRQIKVSPDGTLLASCSND 253
+A+ D ++K+W++ KTL + V+ + GT LA D
Sbjct: 409 ATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 457
Score = 93 (37.8 bits), Expect = 4.2e-17, Sum P(2) = 4.2e-17
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
YLAT + D ++KLWD+ TL +N+ V+ + F G YL G D ++++
Sbjct: 407 YLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICK 464
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ HS T + F ++ + +D+++K +
Sbjct: 465 QWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFY 503
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 64/182 (35%), Positives = 89/182 (48%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E L GH PV F P + + S SED T+RLW +T GH V D
Sbjct: 531 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 590
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
F G VS D +LW YQ L+ GH +V F PNS++V + S D+T++
Sbjct: 591 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 650
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G CV+ TGH+ + + SP+G LA+ + D +W + EL+GH
Sbjct: 651 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 710
Query: 276 TV 277
TV
Sbjct: 711 TV 712
Score = 234 (87.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/175 (32%), Positives = 83/175 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V F +
Sbjct: 581 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSN 638
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + SAD +++LWD+ C++ GH + + F PN F+ + + D + +W++
Sbjct: 639 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 698
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
G V L GH + V ++ S DG +LAS S D+T R+W A K + +L D T
Sbjct: 699 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD-AIKAFE-DLETDDFT 751
Score = 228 (85.3 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 76/268 (28%), Positives = 116/268 (43%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+A D+T+R+W + L SV+ A D S L+ S D+ ++ D
Sbjct: 481 SLIAGGFADSTVRVWSVTPKK--------LRSVKQ-ASDLS--LIDKESDDVLERIMDEK 529
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T LK + GH V G +F P+ +++LS+S D T+++W + T C+ GH V
Sbjct: 530 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 589
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAA 295
+ SP G S +D AR+W+ + GH V C + P VA+ S
Sbjct: 590 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 649
Query: 296 X---------------------XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+LATG+ D + LWD+G G ++ L GH
Sbjct: 650 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 709
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V + F G+ L S D T+R+WD
Sbjct: 710 DTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWDV +G+ + GH + +TF P G++L + D + +WD +
Sbjct: 639 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 698
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ V SL F R + +GS+D TV++W+
Sbjct: 699 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 737
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 53/194 (27%), Positives = 85/194 (43%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA-----EL----RGHD 274
C T + + + V+ D +L+A D T RVWS+ K+ ++ +L + D
Sbjct: 460 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESD 519
Query: 275 HTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
+E + + I S YL + S D T++LW + + + L
Sbjct: 520 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 579
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
GH+ V F P G Y VS G D+ R+W T + + ++ H V FH Y
Sbjct: 580 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 639
Query: 391 VVTGSVDKTVKVWE 404
V TGS D+TV++W+
Sbjct: 640 VATGSADRTVRLWD 653
Score = 176 (67.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V FHP + +A+ S D T+RLWD G R GH + + F +G+
Sbjct: 622 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 681
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + + D + LWD+ + ++GH V + F + + + S S D T+++W+
Sbjct: 682 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKA 741
Query: 223 Y 223
+
Sbjct: 742 F 742
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +G D+ +LW L GH V FHP Y+ + D+T+R+WD N
Sbjct: 597 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 656
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + SL F ++ TG+ D V +W+
Sbjct: 657 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 695
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 64/182 (35%), Positives = 89/182 (48%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E L GH PV F P + + S SED T+RLW +T GH V D
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 592
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
F G VS D +LW YQ L+ GH +V F PNS++V + S D+T++
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G CV+ TGH+ + + SP+G LA+ + D +W + EL+GH
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 276 TV 277
TV
Sbjct: 713 TV 714
Score = 233 (87.1 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 51/158 (32%), Positives = 76/158 (48%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V F +
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + SAD +++LWD+ C++ GH + + F PN F+ + + D + +W++
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
G V L GH + V ++ S DG +LAS S D+T R+W
Sbjct: 701 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLW 738
Score = 229 (85.7 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 76/268 (28%), Positives = 116/268 (43%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+A D+T+R+W + L SV+ A D S L+ S D+ ++ D
Sbjct: 483 SLIAGGFADSTVRVWSVTPKK--------LRSVKQAA-DLS--LIDKESDDVLERIMDEK 531
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T LK + GH V G +F P+ +++LS+S D T+++W + T C+ GH V
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 591
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAA 295
+ SP G S +D AR+W+ + GH V C + P VA+ S
Sbjct: 592 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 651
Query: 296 X---------------------XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+LATG+ D + LWD+G G ++ L GH
Sbjct: 652 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V + F G+ L S D T+R+WD
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWDV +G+ + GH + +TF P G++L + D + +WD +
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ V SL F R + +GS+D TV++W+
Sbjct: 701 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/194 (27%), Positives = 85/194 (43%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK-----AEL----RGHD 274
C T + + + V+ D +L+A D T RVWS+ K+ + A+L + D
Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESD 521
Query: 275 HTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
+E + + I S YL + S D T++LW + + + L
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 581
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
GH+ V F P G Y VS G D+ R+W T + + ++ H V FH Y
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 391 VVTGSVDKTVKVWE 404
V TGS D+TV++W+
Sbjct: 642 VATGSADRTVRLWD 655
Score = 177 (67.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V FHP + +A+ S D T+RLWD G R GH + + F +G+
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + + D + LWD+ + ++GH V + F + + + S S D T+++W+
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 743
Query: 223 Y 223
+
Sbjct: 744 F 744
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +G D+ +LW L GH V FHP Y+ + D+T+R+WD N
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + SL F ++ TG+ D V +W+
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 64/182 (35%), Positives = 89/182 (48%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E L GH PV F P + + S SED T+RLW +T GH V D
Sbjct: 533 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 592
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
F G VS D +LW YQ L+ GH +V F PNS++V + S D+T++
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 652
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G CV+ TGH+ + + SP+G LA+ + D +W + EL+GH
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 276 TV 277
TV
Sbjct: 713 TV 714
Score = 234 (87.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 56/175 (32%), Positives = 83/175 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V F +
Sbjct: 583 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSN 640
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + SAD +++LWD+ C++ GH + + F PN F+ + + D + +W++
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
G V L GH + V ++ S DG +LAS S D+T R+W A K + +L D T
Sbjct: 701 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD-AIKAFE-DLETDDFT 753
Score = 228 (85.3 bits), Expect = 5.5e-16, P = 5.5e-16
Identities = 76/268 (28%), Positives = 116/268 (43%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+A D+T+R+W + L SV+ A D S L+ S D+ ++ D
Sbjct: 483 SLIAGGFADSTVRVWSVTPKK--------LRSVKQ-ASDLS--LIDKESDDVLERIMDEK 531
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T LK + GH V G +F P+ +++LS+S D T+++W + T C+ GH V
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 591
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAA 295
+ SP G S +D AR+W+ + GH V C + P VA+ S
Sbjct: 592 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 651
Query: 296 X---------------------XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+LATG+ D + LWD+G G ++ L GH
Sbjct: 652 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 711
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V + F G+ L S D T+R+WD
Sbjct: 712 DTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWDV +G+ + GH + +TF P G++L + D + +WD +
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 700
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ V SL F R + +GS+D TV++W+
Sbjct: 701 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 53/194 (27%), Positives = 85/194 (43%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA-----EL----RGHD 274
C T + + + V+ D +L+A D T RVWS+ K+ ++ +L + D
Sbjct: 462 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESD 521
Query: 275 HTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
+E + + I S YL + S D T++LW + + + L
Sbjct: 522 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 581
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
GH+ V F P G Y VS G D+ R+W T + + ++ H V FH Y
Sbjct: 582 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 641
Query: 391 VVTGSVDKTVKVWE 404
V TGS D+TV++W+
Sbjct: 642 VATGSADRTVRLWD 655
Score = 176 (67.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V FHP + +A+ S D T+RLWD G R GH + + F +G+
Sbjct: 624 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 683
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + + D + LWD+ + ++GH V + F + + + S S D T+++W+
Sbjct: 684 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKA 743
Query: 223 Y 223
+
Sbjct: 744 F 744
Score = 136 (52.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +G D+ +LW L GH V FHP Y+ + D+T+R+WD N
Sbjct: 599 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 658
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + SL F ++ TG+ D V +W+
Sbjct: 659 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 697
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 64/182 (35%), Positives = 89/182 (48%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E L GH PV F P + + S SED T+RLW +T GH V D
Sbjct: 534 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 593
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
F G VS D +LW YQ L+ GH +V F PNS++V + S D+T++
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVR 653
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G CV+ TGH+ + + SP+G LA+ + D +W + EL+GH
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 276 TV 277
TV
Sbjct: 714 TV 715
Score = 235 (87.8 bits), Expect = 8.7e-17, P = 8.7e-17
Identities = 56/175 (32%), Positives = 83/175 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V F +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRFHPNSN 641
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + SAD +++LWD+ C++ GH + + F PN F+ + + D + +W++
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
G V L GH + V ++ S DG +LAS S D+T R+W A K + +L D T
Sbjct: 702 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD-AVKAFE-DLETDDFT 754
Score = 229 (85.7 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 76/268 (28%), Positives = 116/268 (43%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+A D+T+R+W + L SV+ A D S L+ S D+ ++ D
Sbjct: 484 SLIAGGFADSTVRVWSVTPKK--------LRSVKQAA-DLS--LIDKESDDVLERIMDEK 532
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T LK + GH V G +F P+ +++LS+S D T+++W + T C+ GH V
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 592
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAA 295
+ SP G S +D AR+W+ + GH V C + P VA+ S
Sbjct: 593 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTV 652
Query: 296 X---------------------XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+LATG+ D + LWD+G G ++ L GH
Sbjct: 653 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V + F G+ L S D T+R+WD
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWDV +G+ + GH + +TF P G++L + D + +WD +
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ V SL F R + +GS+D TV++W+
Sbjct: 702 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 189 (71.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 54/194 (27%), Positives = 85/194 (43%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK-----AEL----RGHD 274
C T + + + V+ D +L+A D T RVWS+ K+ + A+L + D
Sbjct: 463 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESD 522
Query: 275 HTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
+E + + I S YL + S D T++LW + + + L
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 582
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
GH+ V F P G Y VS G D+ R+W T + + ++ H V FH Y
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNY 642
Query: 391 VVTGSVDKTVKVWE 404
V TGS D+TV++W+
Sbjct: 643 VATGSADRTVRLWD 656
Score = 177 (67.4 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V FHP + +A+ S D T+RLWD G R GH + + F +G+
Sbjct: 625 AGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + + D + LWD+ + ++GH V + F + + + S S D T+++W+
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
Query: 223 Y 223
+
Sbjct: 745 F 745
Score = 136 (52.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/99 (28%), Positives = 44/99 (44%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +G D+ +LW L GH V FHP Y+ + D+T+R+WD N
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLN 659
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + SL F ++ TG+ D V +W+
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 65/195 (33%), Positives = 105/195 (53%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L+GH + + F + S S D T+ LWD E GE + LH D V + F G+
Sbjct: 384 LTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTD-DGVTTVMFSPDGQ 442
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE--- 218
+ + S D +++W S+ ++ + GH+ +V VAF P+ +++S S D TIK+WE
Sbjct: 443 FIAAGSLDKVIRIWT-SSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWELQC 501
Query: 219 ---VAT------GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
VA G C +T TGH++++ + VSPDG + S S D T + WS + ++
Sbjct: 502 VSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLT 561
Query: 270 LRGHDHTVECVAWAP 284
L+GH+++V VA +P
Sbjct: 562 LQGHNNSVISVAVSP 576
Score = 280 (103.6 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 82/319 (25%), Positives = 146/319 (45%)
Query: 105 HRSPVIKVIFHPVFSLMAS-CSEDATIRLWDYETGEYERALHGHLDS------VQDIAFD 157
H S + V F +A+ C+ A + ++ ETG+ L V+ +AF
Sbjct: 298 HTSVICYVRFSADGKFLATGCNRAAMV--FNVETGKLITLLQEESSKREGDLYVRSVAFS 355
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
GK L + D +++WD++ + + + GH+ + + F + ++S S D+T+ +W
Sbjct: 356 PDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLW 415
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+V G K + + V + SPDG +A+ S D R+W+ ++ +L GH+ +V
Sbjct: 416 DVEAGE-QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESV 473
Query: 278 ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVG------------SGS 325
VA++P YL +GS D TIKLW++ G
Sbjct: 474 YSVAFSPD------------------GKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGI 515
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
T GH +++ VT P GK+++S D+T++ W + + TL+ H++ V S+
Sbjct: 516 CKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVS 575
Query: 386 -RAHPYVVTGSVDKTVKVW 403
H + TGS D ++W
Sbjct: 576 PNGHCFA-TGSGDLRARIW 593
Score = 252 (93.8 bits), Expect = 4.7e-19, P = 4.7e-19
Identities = 62/181 (34%), Positives = 91/181 (50%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
W A E+ + V V+F P +A+ S D IR+W +G LHGH +SV
Sbjct: 415 WDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWT-SSGTLVEQLHGHEESV 473
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDM--------STYQ----CLKTMQGHDHNVTGVAFL 199
+AF GK LVS S D ++KLW++ S Y+ C +T GH + V
Sbjct: 474 YSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVS 533
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
P+ +++S S+D+TI+ W + + TL GH V + VSP+G A+ S D AR+W
Sbjct: 534 PDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIW 593
Query: 260 S 260
S
Sbjct: 594 S 594
Score = 169 (64.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/99 (38%), Positives = 59/99 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGH-DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
L +GS D+T+ LWDV +G LI H D+ V V F P G+++ + DK +R+W T++
Sbjct: 403 LVSGSGDRTVCLWDVEAGEQ--KLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSS 459
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ L H V S+ F Y+V+GS+D T+K+WE
Sbjct: 460 GTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDNTIKLWE 498
Score = 165 (63.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 38/106 (35%), Positives = 63/106 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDN-------WVRGVTFHPGGKYLVSCGDDKTL 358
+LATG ++ +++V +G L+ TL+ ++ +VR V F P GKYL + +D+ +
Sbjct: 313 FLATGC-NRAAMVFNVETGKLI-TLLQEESSKREGDLYVRSVAFSPDGKYLATGVEDQQI 370
Query: 359 RVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
R+WD A KR + L H + SLDF + +V+GS D+TV +W+
Sbjct: 371 RIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 416
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 287 (106.1 bits), Expect = 1.8e-24, P = 1.8e-24
Identities = 64/193 (33%), Positives = 97/193 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH PV + F S + SCSED+T+R WD ++ GH V D+
Sbjct: 350 LRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSPCSL 409
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ S D + +LW + L+ GH +V V F PNS+++ + S DKT+++W
Sbjct: 410 YFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQ 469
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
G V+ TGHR V + SP+G LAS D ++W LA+ +LRGH T+ ++
Sbjct: 470 GASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLS 529
Query: 282 WAPG---VASESI 291
++ VAS S+
Sbjct: 530 FSQDSSLVASASM 542
Score = 251 (93.4 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 53/169 (31%), Positives = 81/169 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
GH PV V P ++ S D T RLW + R GHL V + F + +
Sbjct: 394 GHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYI 453
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ S D +++LW ++ GH V +AF PN ++ SA D+ +K+W++A+G
Sbjct: 454 ATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGG 513
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
K L GH + + + S D +L+AS S D+T RVW + A G
Sbjct: 514 LFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPTDG 562
Score = 224 (83.9 bits), Expect = 9.6e-16, P = 9.6e-16
Identities = 44/121 (36%), Positives = 67/121 (55%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH S V V FHP + +A+ S D T+RLW G R GH V +AF +GK
Sbjct: 435 AGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKY 494
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L S D LKLWD+++ K ++GH ++ ++F +S V SAS D T+++W++
Sbjct: 495 LASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNA 554
Query: 223 Y 223
+
Sbjct: 555 H 555
Score = 219 (82.2 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 41/101 (40%), Positives = 60/101 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS DKT++LW G+ + GH V + F P GKYL S G+D+ L++WD A+
Sbjct: 452 YIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLAS 511
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
K L H+ ++SL F + V + S+D TV+VW+ R
Sbjct: 512 GGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIR 552
Score = 192 (72.6 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 47/150 (31%), Positives = 74/150 (49%)
Query: 137 TGEYERALHGHLDSVQDIAF--DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVT 194
+G + L GH V AF D SG L+SCS D +++ WD+ ++ +GH + V
Sbjct: 343 SGSEIKTLRGHSGPVYRTAFLTDASG--LLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVW 400
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254
V P S + +AS D+T ++W A Y ++ GH V +K P+ +A+ S D
Sbjct: 401 DVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDK 460
Query: 255 TARVWSLATKETKAELRGHDHTVECVAWAP 284
T R+WS + GH V +A++P
Sbjct: 461 TVRLWSTRQGASVRLFTGHRGPVLTLAFSP 490
Score = 155 (59.6 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 52/202 (25%), Positives = 79/202 (39%)
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
T C + + +VS D LLA+ ++ ++WSL ++ KA H V +
Sbjct: 269 TTVCFYAFQHTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARKLKAG--PHKADVSKI 326
Query: 281 AWAPGVASESISEAAXXXXXXXX----------XXYL--ATG----SRDKTIKLWDVGSG 324
A V E + +L A+G S D T++ WD+ S
Sbjct: 327 RLACDVLEEEADDEDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSF 386
Query: 325 SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384
+ GH V V P Y + D+T R+W A ++ H V + F
Sbjct: 387 TNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKF 446
Query: 385 HRAHPYVVTGSVDKTVKVWECR 406
H Y+ TGS DKTV++W R
Sbjct: 447 HPNSNYIATGSTDKTVRLWSTR 468
Score = 146 (56.5 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +T S D+T +LW L GH + V V FHP Y+ + DKT+R+W T
Sbjct: 410 YFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQ 469
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+++ H V +L F Y+ + D+ +K+W+
Sbjct: 470 GASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWD 508
Score = 124 (48.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+ D+ +KLWD+ SG L L GH + + ++F + S D T+RVWD N
Sbjct: 494 YLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRN 553
Score = 97 (39.2 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 40/139 (28%), Positives = 60/139 (43%)
Query: 147 HLDSVQDIAFDQSGKLLVSCSADMS-LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
H + + + A + L++ D S +KLW + + LK H +V+ + + V
Sbjct: 278 HTEQLLNTAEVSADSRLLAAGFDNSAVKLWSLRARK-LKAGP-HKADVSKIRLACD---V 332
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
L D E A+G +KTL GH V + D + L SCS D T R W L +
Sbjct: 333 LEEEADD-----EDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFT 387
Query: 266 TKAELRGHDHTVECVAWAP 284
RGH + V V +P
Sbjct: 388 NTVLYRGHAYPVWDVDVSP 406
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 227 (85.0 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 44/151 (29%), Positives = 80/151 (52%)
Query: 109 VIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSA 168
++ + + P +AS + D I ++D TG+ L GH ++ + F +LLV+ S
Sbjct: 151 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD 210
Query: 169 DMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
D +K++D+ T+ GH V VAF P+ +S+S DK+IK+W+ ++ CV T
Sbjct: 211 DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTF 270
Query: 229 TGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
H++ V +K +P G+ + S +D ++
Sbjct: 271 FDHQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
Score = 222 (83.2 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 52/181 (28%), Positives = 91/181 (50%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
V F P +A+ S + ++ E+G+ E +L + IA+ GK L S + D
Sbjct: 112 VAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGI 171
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+ ++D++T + L T++GH + + F P+S +++AS D IK+++V TL+GH
Sbjct: 172 INIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESI 291
WV + SPD T S S+D + +VW +++ H V V + P S+ +
Sbjct: 232 GSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNP-TGSKIV 290
Query: 292 S 292
S
Sbjct: 291 S 291
Score = 209 (78.6 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 53/196 (27%), Positives = 99/196 (50%)
Query: 91 EWIPRAPE-KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALH-GHL 148
+W E ++ L GH+ V+ V ++ AS S DA IRLWD ETG+ +++ G +
Sbjct: 48 KWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPV 107
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
D+ +AF K + + S + ++ + + + ++ + +A+ P+ ++ S
Sbjct: 108 DA-WTVAFSPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASG 166
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA 268
+ D I ++++ATG + TL GH +R + SPD LL + S+D +++ +
Sbjct: 167 AIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 226
Query: 269 ELRGHDHTVECVAWAP 284
L GH V VA++P
Sbjct: 227 TLSGHGSWVLSVAFSP 242
Score = 182 (69.1 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 36/99 (36%), Positives = 58/99 (58%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
YLA+G+ D I ++D+ +G LL TL GH +R +TF P + LV+ DD ++++D +
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
TL H +V S+ F + V+ S DK++KVW+
Sbjct: 222 ANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWD 260
Score = 182 (69.1 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 64/237 (27%), Positives = 106/237 (44%)
Query: 177 MSTYQCLKTMQGHDHN------VTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVK--TL 228
MST + Q H H G + S+ +++ S D +K+W+ + TL
Sbjct: 1 MSTQYSILFKQEHAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL 60
Query: 229 TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLAT-KETKAELRGHDHTVECVAWAPGVA 287
GH+ V + +S +G + AS S D R+W L T K+ K+ G V+ AW +
Sbjct: 61 EGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAG---PVD--AWTVAFS 115
Query: 288 SESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK 347
+S Y+ATGS + ++ V SG +L ++ + + P GK
Sbjct: 116 PDS--------------KYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGK 161
Query: 348 YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
YL S D + ++D A + + TLE H+ + SL F +VT S D +K+++
Sbjct: 162 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYD 218
Score = 178 (67.7 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH P+ + F P L+ + S+D I+++D + L GH V +AF
Sbjct: 186 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDT 245
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
VS S+D S+K+WD S+ C+ T H V V + P ++SA D+ I +++
Sbjct: 246 HFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
Score = 171 (65.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 33/99 (33%), Positives = 55/99 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
L T S D IK++DV +L TL GH +WV V F P + VS DK+++VWDT+++
Sbjct: 205 LVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSR 264
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
+ T H V S+ ++ +V+ D+ + +++C
Sbjct: 265 SCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYDC 303
Score = 119 (46.9 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + S DK+IK+WD S S + T H + V V ++P G +VS GDD+ + ++D
Sbjct: 246 HFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 265 (98.3 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 51/165 (30%), Positives = 84/165 (50%)
Query: 120 LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
L+A+ +D + +W +L GH ++ + +L+V+ S S+++WD+
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEA 94
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ L+T+ GH N+ + F P FV S S D IK+W+V C+ H + VR ++
Sbjct: 95 AKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLR 154
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
SPDG LAS ++DHT ++W L + E GH V V + P
Sbjct: 155 FSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP 199
Score = 253 (94.1 bits), Expect = 4.4e-19, P = 4.4e-19
Identities = 56/194 (28%), Positives = 92/194 (47%)
Query: 92 WIPRAPE-KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P +L+GH +P+ + L+ + S+ +IR+WD E + R L GH +
Sbjct: 48 WSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKAN 107
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ + F G + S S D +KLWD+ C+ + H V + F P+ ++ SA+
Sbjct: 108 ICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D T+K+W++ G + TGH V ++ P LLAS S+D T R W L + +
Sbjct: 168 DHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCI 227
Query: 271 RGHDHTVECVAWAP 284
V C+ + P
Sbjct: 228 EEEATPVRCILFNP 241
Score = 205 (77.2 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 50/158 (31%), Positives = 77/158 (48%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH++ + + FHP S +AS S D I+LWD H +V+ + F GK
Sbjct: 101 LLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK 160
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S + D ++KLWD++ + + GH V V F P+ + S S D+TI+ W++
Sbjct: 161 WLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEK 220
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
+ V + VR I +PDG L D + RV+
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDGCCLYGGFQD-SLRVY 257
Score = 185 (70.2 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 36/99 (36%), Positives = 55/99 (55%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+GS D IKLWDV +F H VR + F P GK+L S DD T+++WD
Sbjct: 119 FVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ M HS V ++FH + + +GS D+T++ W+
Sbjct: 179 GKVMFEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWD 217
Score = 164 (62.8 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 30/139 (21%), Positives = 69/139 (49%)
Query: 147 HLDSVQDIAFDQS-GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
H +V + +S G+LL + D + +W ++ C+ ++ GH + + + +
Sbjct: 19 HSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELI 78
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
++ S+ +I++W++ ++TL GH+ + + P G+ +AS S D ++W + K
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKG 138
Query: 266 TKAELRGHDHTVECVAWAP 284
+ + H V C+ ++P
Sbjct: 139 CIFKYKSHTQAVRCLRFSP 157
Score = 157 (60.3 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 30/100 (30%), Positives = 52/100 (52%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATG D + +W V + + +L GH + + + +V+ ++RVWD
Sbjct: 36 LATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAA 95
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL H + SLDFH +V +GS+D +K+W+ R
Sbjct: 96 KILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR 135
Score = 149 (57.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 28/98 (28%), Positives = 54/98 (55%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ GS+ +I++WD+ + +L TL+GH + + FHP G ++ S D +++WD K
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRK 137
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ ++H+ V L F ++ + + D TVK+W+
Sbjct: 138 GCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Score = 127 (49.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 31/120 (25%), Positives = 53/120 (44%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F H V + F P +AS ++D T++LWD G+ GH V + F S
Sbjct: 141 FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPS 200
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT-IKMWE 218
LL S S+D +++ WD+ + + ++ V + F P+ + +D + WE
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYGGFQDSLRVYGWE 260
Score = 73 (30.8 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
LA+GS D+TI+ WD+ ++ + VR + F+P G L G +LRV+
Sbjct: 204 LASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLYG-GFQDSLRVY 257
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 82/272 (30%), Positives = 136/272 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLW-DYETGEY--ERALH-GHLDSVQDIAFD 157
LSGHR V +HP ++A+C ED TIR+W D TG + + L GH +++D+A+
Sbjct: 10 LSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVAWS 69
Query: 158 QSGKLLVSCSADMSLKLWDMST--YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
G+ L S S D ++ +WD + ++C T++GH++ V V++ + + + SRDK++
Sbjct: 70 PCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKSVW 129
Query: 216 MWEVATG--Y-CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW--SLATKETKA-- 268
+WEVA Y C L H + V++++ P+ +LAS S D+T +++ LA + +
Sbjct: 130 IWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQLYREDLADSDWSSFD 189
Query: 269 ELRGHDHTVECVAW-APG--VASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS 325
L HD TV +A+ A G +AS S + D +W
Sbjct: 190 TLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNEFGVACPDGKTPVW-----K 244
Query: 326 LLFTLIG-HDNWVRGVTF-HPGGKYLVSCGDD 355
+ TL G H V +++ G +CGDD
Sbjct: 245 CVCTLSGFHSRAVYDISWCKKTGLIATACGDD 276
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 82/292 (28%), Positives = 135/292 (46%)
Query: 92 WIPRAPEKFALS-GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHL 148
W+P K LS GH + V + P +AS S DAT+ +WD +GE+E L GH
Sbjct: 49 WVP----KTVLSDGHTRTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHE 104
Query: 149 DSVQDIAFDQSGKLLVSCSADMSLKLWDMST---YQCLKTMQGHDHNVTGVAFLPNSDFV 205
+ V+ +++ +SG LL +CS D S+ +W+++ Y+C + H +V V + PN D +
Sbjct: 105 NEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNEDVL 164
Query: 206 LSASRDKTIKMW--EVATG--YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
SAS D TI+++ ++A TL H V I G+ LASCS+D T R+W
Sbjct: 165 ASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIWQE 224
Query: 262 ATKETKAELR---GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKL 318
+ + G +CV G S ++ + + +AT D +++
Sbjct: 225 YKPGNEFGVACPDGKTPVWKCVCTLSGFHSRAVYDISWCKKTGL----IATACGDDMVRI 280
Query: 319 WDVGSGSLL----FTLIG----HDNWVRGVTFHPG-GKYLVSCGDDKTLRVW 361
+ +GS F ++ H V + P LV+ DD +++W
Sbjct: 281 FREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDDGDVKLW 332
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 74/233 (31%), Positives = 111/233 (47%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW-DMSTYQCL-KTM--QGHDHNVTGVA 197
+ L GH V + +L +C D ++++W D T + + KT+ GH + VA
Sbjct: 8 QCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHTRTIRDVA 67
Query: 198 FLPNSDFVLSASRDKTIKMWEVATGY--CVKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
+ P F+ SAS D T+ +W+ +G C TL GH V+ + S G LLA+CS D +
Sbjct: 68 WSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSRDKS 127
Query: 256 ARVWSLATK---ETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSR 312
+W +A + E A L H V+ V W P +E + LA+ S
Sbjct: 128 VWIWEVAQEDEYECAAVLNTHSQDVKKVEWHP---NEDV---------------LASASY 169
Query: 313 DKTIKLW--DVGSG--SLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
D TI+L+ D+ S TL HD+ V + F G L SC DD+T+R+W
Sbjct: 170 DNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIW 222
Score = 225 (84.3 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 71/241 (29%), Positives = 111/241 (46%)
Query: 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW-EVATGYCV-KTLT--GHR 232
M L+ + GH V G + P + + DKTI++W + TG V KT+ GH
Sbjct: 1 MGKLTLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHT 60
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK--AELRGHDHTVECVAWAPGVASES 290
+R + SP G LAS S D T +W + E + A L GH++ V+ V+W+ A
Sbjct: 61 RTIRDVAWSPCGRFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGA--- 117
Query: 291 ISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGS---LLFTLIGHDNWVRGVTFHPGGK 347
LAT SRDK++ +W+V L H V+ V +HP
Sbjct: 118 ---------------LLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVKKVEWHPNED 162
Query: 348 YLVSCGDDKTLRVW--DTANK--RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
L S D T++++ D A+ + TL +H V S+ F + + + S D+TV++W
Sbjct: 163 VLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASCSDDQTVRIW 222
Query: 404 E 404
+
Sbjct: 223 Q 223
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 66/246 (26%), Positives = 114/246 (46%)
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG--Y-CVKTLTGHREWVR 236
++C T++GH++ V V++ + + + SRDK++ +WEVA Y C L H + V+
Sbjct: 94 FECNATLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAVLNTHSQDVK 153
Query: 237 QIKVSPDGTLLASCSNDHTARVW--SLATKETKA--ELRGHDHTVECVAW-APG--VASE 289
+++ P+ +LAS S D+T +++ LA + + L HD TV +A+ A G +AS
Sbjct: 154 KVEWHPNEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSRLASC 213
Query: 290 SISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIG-HDNWVRGVTF-HPGGK 347
S + D +W + TL G H V +++ G
Sbjct: 214 SDDQTVRIWQEYKPGNEFGVACPDGKTPVW-----KCVCTLSGFHSRAVYDISWCKKTGL 268
Query: 348 YLVSCGDDKTLRVW-DTANK-RNMKTLE------AHSHFVTSLDFH-RAHPYVVTGSVDK 398
+CGDD +R++ + A N T E AHS ++++ +VT S D
Sbjct: 269 IATACGDDM-VRIFREVAGSPANEPTFEMVASKHAHSQDANTVEWSPTVAGLLVTTSDDG 327
Query: 399 TVKVWE 404
VK+W+
Sbjct: 328 DVKLWK 333
Score = 124 (48.7 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 29/90 (32%), Positives = 48/90 (53%)
Query: 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW-DTANKRNM-KTL--EAHS 376
+G +LL L GH V G +HP L +CG+DKT+R+W D R + KT+ + H+
Sbjct: 1 MGKLTLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIWADDGTGRWVPKTVLSDGHT 60
Query: 377 HFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ + + ++ + S D TV +W+ R
Sbjct: 61 RTIRDVAWSPCGRFLASASFDATVAIWDRR 90
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 291 (107.5 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 84/306 (27%), Positives = 138/306 (45%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
KFA R V V HP + + T+ +W+Y+T ++ V+ F
Sbjct: 225 KFAQRSER--VKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIA 282
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
+ +V+ + DM +++++ +T +K + H + VA P +VLS+S D IK+W+
Sbjct: 283 RKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWD 342
Query: 219 VATGY-CVKTLTGHREWVRQIKVSP-DGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
G+ C + GH +V Q+ +P D AS S D T ++W+L + + L H
Sbjct: 343 WEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKG 402
Query: 277 VECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336
V CV + G YL TGS D T K+WD + S + TL GH +
Sbjct: 403 VNCVDYFTG----------------GDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHN 446
Query: 337 VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV 396
V V+FHP +++ +D T+R+W R TL V ++ + VV G
Sbjct: 447 VSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGSRRVVIGYD 506
Query: 397 DKTVKV 402
+ ++ V
Sbjct: 507 EGSIMV 512
Score = 271 (100.5 bits), Expect = 5.2e-21, P = 5.2e-21
Identities = 78/307 (25%), Positives = 141/307 (45%)
Query: 106 RSPVIKVIFHPVFSLMASCSEDATIRLW------DYETGEYERALHGHLDSVQDIAFDQS 159
+ P +I PV + + +C +D +R++ D E +R + V+ + +
Sbjct: 183 QGPFPSIIRSPVQTFVWTC-KDVYVRVFLIALKFDPLRLEIKRKFAQRSERVKSVDLHPT 241
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
+++ +L +W+ T +K+ + V F+ +V++ + D I+++
Sbjct: 242 EPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNY 301
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL-RGHDHTVE 278
T +K H +++R + V P + S S+D ++W ++ GH H V
Sbjct: 302 NTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVM 361
Query: 279 CVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVR 338
V + P + A+ S D+TIK+W++GS FTL H V
Sbjct: 362 QVTFNPKDTNT-----------------FASASLDRTIKIWNLGSPDPNFTLDAHLKGVN 404
Query: 339 GVTFHPGGK--YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSV 396
V + GG YL++ DD T +VWD K ++TLE H+H V+++ FH P ++TGS
Sbjct: 405 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSE 464
Query: 397 DKTVKVW 403
D TV++W
Sbjct: 465 DGTVRIW 471
Score = 177 (67.4 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 58/216 (26%), Positives = 92/216 (42%)
Query: 193 VTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN 252
V V P ++L++ T+ +W T VK+ VR K + + ++
Sbjct: 233 VKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGAD 292
Query: 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSR 312
D RV++ T + H + CVA P + Y+ + S
Sbjct: 293 DMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLP------------------YVLSSSD 334
Query: 313 DKTIKLWDVGSGSLLFTLI-GHDNWVRGVTFHPGG-KYLVSCGDDKTLRVWDTANKRNMK 370
D IKLWD G L + GH ++V VTF+P S D+T+++W+ +
Sbjct: 335 DMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 394
Query: 371 TLEAHSHFVTSLDFHRA--HPYVVTGSVDKTVKVWE 404
TL+AH V +D+ PY++TGS D T KVW+
Sbjct: 395 TLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD 430
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 245 (91.3 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 75/271 (27%), Positives = 128/271 (47%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
K L+GH V+ + + ++ + S D+T+R+WD GE L H ++V + F+
Sbjct: 237 KRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNN 294
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCL---KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
++V+CS D S+ +WDM++ + + + GH V V F + +++SAS D+TIK
Sbjct: 295 G--MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIK 350
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W +T V+TL GH+ + ++ L+ S S+D+T R+W + L GH+
Sbjct: 351 VWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEE 408
Query: 276 TVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL-LFTLIGHD 334
V C+ + ++ I A A R +G+L L TL+ H
Sbjct: 409 LVRCIRFD----NKRIVSGAYDGKIKVWDLMAALDPR--------APAGTLCLRTLVEHS 456
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
V + F +VS D T+ +WD N
Sbjct: 457 GRVFRLQFDEF--QIVSSSHDDTILIWDFLN 485
Score = 232 (86.7 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 59/175 (33%), Positives = 91/175 (52%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE---YERALHGH 147
W A E L H V+ + F+ +M +CS+D +I +WD + R L GH
Sbjct: 269 WDVNAGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 326
Query: 148 LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD-FVL 206
+V + FD K +VS S D ++K+W+ ST + ++T+ GH G+A L D V+
Sbjct: 327 RAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR---GIACLQYRDRLVV 381
Query: 207 SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
S S D TI++W++ G C++ L GH E VR I+ D + S + D +VW L
Sbjct: 382 SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 434
Score = 215 (80.7 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 47/159 (29%), Positives = 89/159 (55%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D TI++WD T E +R L GH SV + +D+ +++++ S+D ++++WD++ + L T+
Sbjct: 223 DNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAGEMLNTL 280
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV---KTLTGHREWVRQIKVSPD 243
H V + F N+ +++ S+D++I +W++A+ + + L GHR V + D
Sbjct: 281 IHHCEAVLHLRF--NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--D 336
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ S S D T +VW+ +T E L GH + C+ +
Sbjct: 337 DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY 375
Score = 172 (65.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ TGS D T+++WDV +G +L TLI H V + F+ G +V+C D+++ VWD A+
Sbjct: 257 IITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMASP 314
Query: 367 RNM---KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
++ + L H V +DF Y+V+ S D+T+KVW
Sbjct: 315 TDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVW 352
Score = 156 (60.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+VS D ++K+WD ST +C + + GH +V + + + +++ S D T+++W+V G
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNAG 274
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR----GHDHTVE 278
+ TL H E V ++ + +G ++ +CS D + VW +A+ T LR GH V
Sbjct: 275 EMLNTLIHHCEAVLHLRFN-NG-MMVTCSKDRSIAVWDMASP-TDITLRRVLVGHRAAVN 331
Query: 279 CV 280
V
Sbjct: 332 VV 333
Score = 140 (54.3 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ + S D+TIK+W+ + + TL GH + + + + +VS D T+R+WD
Sbjct: 339 YIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIEC 396
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ LE H V + F +V+G+ D +KVW+
Sbjct: 397 GACLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWD 433
Score = 130 (50.8 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 36/107 (33%), Positives = 53/107 (49%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDT--- 363
+ +GS D TI+LWD+ G+ L L GH+ VR + F K +VS D ++VWD
Sbjct: 380 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLMAA 437
Query: 364 ------ANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
A ++TL HS V L F +V+ S D T+ +W+
Sbjct: 438 LDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQ--IVSSSHDDTILIWD 482
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ +G RD TIK+WD + L GH V + + + +++ D T+RVWD
Sbjct: 217 IVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWDVNAG 274
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ TL H V L F+ +VT S D+++ VW+
Sbjct: 275 EMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRSIAVWD 310
Score = 101 (40.6 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 29/84 (34%), Positives = 42/84 (50%)
Query: 195 GVAFLPNSDF-VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSND 253
GV L D ++S RD TIK+W+ +T C + LTGH V ++ D ++ + S+D
Sbjct: 206 GVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY--DERVIITGSSD 263
Query: 254 HTARVWSLATKETKAELRGHDHTV 277
T RVW + E L H V
Sbjct: 264 STVRVWDVNAGEMLNTLIHHCEAV 287
Score = 64 (27.6 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 243 DGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
D + S D+T ++W +T E K L GH +V C+ +
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQY 252
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 291 (107.5 bits), Expect = 2.7e-24, P = 2.7e-24
Identities = 78/273 (28%), Positives = 119/273 (43%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
FHP + I+LWDY H V+ +AF Q L VS D +K
Sbjct: 17 FHPKRPWILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLFVSGGDDYKIK 76
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
+W+ +C+ T+ H V VAF ++LSAS D+TI++W + C+ LTGH
Sbjct: 77 VWNYKQRRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNH 136
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLA--TKETKA--------ELRGHDHTVECVAWA 283
+V + P + S S D T RVW ++ K+ A L+GH + A
Sbjct: 137 YVMCAQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLDDHLKGHPGATDLFGQA 196
Query: 284 PGVAS---ESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL--LFTLIGHDNWVR 338
V E + +G+ D+ +KLW + + T GH N V
Sbjct: 197 DAVVKHVLEGHDRGFNWASFHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVS 256
Query: 339 GVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKT 371
V FHP ++S G+D+++RVWD ++ + T
Sbjct: 257 SVLFHPRQDLILSNGEDRSIRVWDMTKRQCLFT 289
Score = 245 (91.3 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 66/258 (25%), Positives = 114/258 (44%)
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+LVS + + ++LWD + L+ HD V GVAF +S D IK+W
Sbjct: 24 ILVSLHSGV-IQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLFVSGGDDYKIKVWNYKQ 82
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
C+ TL H ++VR + + + S S+D T R+W+ ++ L GH+H V C
Sbjct: 83 RRCIFTLLAHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQ 142
Query: 282 WAPG---VASESISEAAXX-XXXXXXXXYLATG--SRDKTIK-------LWDVGSGSLLF 328
+ P + S S+ + +A G D +K L+ +
Sbjct: 143 FHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLDDHLKGHPGATDLFGQADAVVKH 202
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR--NMKTLEAHSHFVTSLDFHR 386
L GHD +FHP +VS DD+ +++W + + T H + V+S+ FH
Sbjct: 203 VLEGHDRGFNWASFHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHP 262
Query: 387 AHPYVVTGSVDKTVKVWE 404
+++ D++++VW+
Sbjct: 263 RQDLILSNGEDRSIRVWD 280
Score = 206 (77.6 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 74/287 (25%), Positives = 121/287 (42%)
Query: 98 EKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFD 157
EKF H PV V FH L S +D I++W+Y+ L HLD V+ +AF
Sbjct: 45 EKF--DEHDGPVRGVAFHQQMPLFVSGGDDYKIKVWNYKQRRCIFTLLAHLDYVRTVAFH 102
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
++S S D ++++W+ + C+ + GH+H V F P D ++SAS D+T+++W
Sbjct: 103 HEYPWILSASDDQTIRIWNWQSRNCICVLTGHNHYVMCAQFHPTEDQIVSASLDQTVRVW 162
Query: 218 EVATGYCVKTLT-GHREWVRQIKVSPDGTLL---ASCSNDHTA----RVWSLATKETKAE 269
+++ G K + G +K P T L A H R ++ A+
Sbjct: 163 DIS-GLRKKNVAPGPGGLDDHLKGHPGATDLFGQADAVVKHVLEGHDRGFNWASFHPTLP 221
Query: 270 L--RGHDHTV-------ECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWD 320
L G D + E AW + + L+ G D++I++WD
Sbjct: 222 LIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPRQDLILSNGE-DRSIRVWD 280
Query: 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKR 367
+ LFT + +T HP L + G D + V+ +R
Sbjct: 281 MTKRQCLFTFRRDNERFWILTAHPTLN-LFAAGHDGGMVVFKLERER 326
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 282 (104.3 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 71/252 (28%), Positives = 117/252 (46%)
Query: 153 DIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK 212
D+ + K+L AD ++ ++D S+ Q L T++GH VT V F P+ D V SAS D
Sbjct: 228 DLCPSDTNKILTG-GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDA 286
Query: 213 TIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL-R 271
TI++W V CV+ + H V + + G L S S+D + W+ + +T L +
Sbjct: 287 TIRIWSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDD---QYWAFSDIQTGRVLTK 343
Query: 272 GHDHTVECVAWAPGVASESISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLI 331
D T C + + TG+ D IK+WD+ + +
Sbjct: 344 VTDETSGCSLTCAQFHPDGL--------------IFGTGTMDSQIKIWDLKERTNVANFP 389
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF-VTSLDFHRAHPY 390
GH + + F G YL + DD ++++WD +N KTL+ ++F V SL F ++ Y
Sbjct: 390 GHSGPITSIAFSENGYYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTY 449
Query: 391 VVTGSVDKTVKV 402
+ G D + +
Sbjct: 450 LALGGTDVQIYI 461
Score = 207 (77.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 57/232 (24%), Positives = 104/232 (44%)
Query: 127 DATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM 186
D + ++D + + L GH V + F S L+ S S D ++++W + C++ +
Sbjct: 243 DKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVV 302
Query: 187 QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW--VRQIKVSPDG 244
+ H+ VTG++ D++LS+S D+ ++ TG + +T + + PDG
Sbjct: 303 RAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDG 362
Query: 245 TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAXXXXXXXXX 304
+ + + D ++W L + A GH + +A+ SE+
Sbjct: 363 LIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAF-----SEN-------------G 404
Query: 305 XYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDD 355
YLAT + D ++KLWD+ TL +N+ V+ + F G YL G D
Sbjct: 405 YYLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 186 (70.5 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 46/162 (28%), Positives = 75/162 (46%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH V V+FHP L+ S S DATIR+W + + H +V ++ +G
Sbjct: 260 LKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVTGLSLHATGD 319
Query: 162 LLVSCSADMSLKLWDMSTYQCLK--TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEV 219
L+S S D D+ T + L T + ++T F P+ + + D IK+W++
Sbjct: 320 YLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHPDGLIFGTGTMDSQIKIWDL 379
Query: 220 ATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
V GH + I S +G LA+ ++D + ++W L
Sbjct: 380 KERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDL 421
Score = 179 (68.1 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 57/239 (23%), Positives = 109/239 (45%)
Query: 176 DMSTYQCLKTMQG-HDHNVTGVAFL---PN-SDFVLSASRDKTIKMWEVATGYCVKTLTG 230
++S Y+ + + G H ++ G+ L P+ ++ +L+ DK + +++ ++ + TL G
Sbjct: 203 ELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTGGADKNVVVFDKSSEQILATLKG 262
Query: 231 HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASES 290
H + V + P L+ S S D T R+WS+ +R H+ V G++ +
Sbjct: 263 HTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRAHESAVT------GLSLHA 316
Query: 291 ISEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT---FHPGGK 347
+ YL + S D+ D+ +G +L T + + +T FHP G
Sbjct: 317 TGD------------YLLSSSDDQYWAFSDIQTGRVL-TKVTDETSGCSLTCAQFHPDGL 363
Query: 348 YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ D +++WD + N+ HS +TS+ F Y+ T + D +VK+W+ R
Sbjct: 364 IFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWDLR 422
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 39/166 (23%), Positives = 68/166 (40%)
Query: 92 W-IPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLD- 149
W +P A + H S V + H + S S+D D +TG +
Sbjct: 291 WSVPNASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSG 350
Query: 150 -SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
S+ F G + + + D +K+WD+ + GH +T +AF N ++ +A
Sbjct: 351 CSLTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATA 410
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREW-VRQIKVSPDGTLLASCSND 253
+ D ++K+W++ KTL + V+ + GT LA D
Sbjct: 411 ADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD 456
Score = 126 (49.4 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
FHP + + + D+ I++WD + GH + IAF ++G L + + D S+K
Sbjct: 358 FHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVK 417
Query: 174 LWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHR 232
LWD+ + KT+Q ++ V + F + ++ D I + + T + T H
Sbjct: 418 LWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTE--ILHFTEHS 475
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+ +AS D + + +SL
Sbjct: 476 GLTTGVAFGHHAKFIASTGMDRSLKFYSL 504
Score = 93 (37.8 bits), Expect = 5.4e-17, Sum P(2) = 5.4e-17
Identities = 25/99 (25%), Positives = 47/99 (47%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNW-VRGVTFHPGGKYLVSCGDDKTLRVWDTA 364
YLAT + D ++KLWD+ TL +N+ V+ + F G YL G D ++++
Sbjct: 406 YLATAADDSSVKLWDLRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICK 463
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ HS T + F ++ + +D+++K +
Sbjct: 464 QWTEILHFTEHSGLTTGVAFGHHAKFIASTGMDRSLKFY 502
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 287 (106.1 bits), Expect = 3.5e-24, P = 3.5e-24
Identities = 63/182 (34%), Positives = 89/182 (48%)
Query: 96 APEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA 155
A E L GH PV F P + + S SED T+RLW +T GH V D
Sbjct: 534 ASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQ 593
Query: 156 FDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
F G VS D +LW YQ L+ GH +V + PNS++V + S D+T++
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVR 653
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W+V G CV+ TGH+ + + SP+G LA+ + D +W + EL+GH
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 276 TV 277
TV
Sbjct: 714 TV 715
Score = 232 (86.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 55/175 (31%), Positives = 83/175 (47%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSGK 161
GH PV F P S D RLW T Y+ R GHL V + +
Sbjct: 584 GHNYPVWDTQFSPYGYYFVSGGHDRVARLW--ATDHYQPLRIFAGHLADVNCTRYHPNSN 641
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+ + SAD +++LWD+ C++ GH + + F PN F+ + + D + +W++
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
G V L GH + V ++ S DG +LAS S D+T R+W A K + +L D T
Sbjct: 702 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD-AVKAFE-DLETDDFT 754
Score = 229 (85.7 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 76/268 (28%), Positives = 116/268 (43%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMS 178
SL+A D+T+R+W + L SV+ A D S L+ S D+ ++ D
Sbjct: 484 SLIAGGFADSTVRVWSVTPKK--------LRSVKQ-ASDLS--LIDKESDDVLERIMDEK 532
Query: 179 TYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
T LK + GH V G +F P+ +++LS+S D T+++W + T C+ GH V
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDT 592
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---VASESISEAA 295
+ SP G S +D AR+W+ + GH V C + P VA+ S
Sbjct: 593 QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTV 652
Query: 296 X---------------------XXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+LATG+ D + LWD+G G ++ L GH
Sbjct: 653 RLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT 712
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ V + F G+ L S D T+R+WD
Sbjct: 713 DTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 190 (71.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 35/99 (35%), Positives = 59/99 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y+ATGS D+T++LWDV +G+ + GH + +TF P G++L + D + +WD +
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH 701
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ L+ H+ V SL F R + +GS+D TV++W+
Sbjct: 702 GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740
Score = 183 (69.5 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 52/194 (26%), Positives = 85/194 (43%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKA-----EL----RGHD 274
C T + + + V+ D +L+A D T RVWS+ K+ ++ +L + D
Sbjct: 463 CFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESD 522
Query: 275 HTVECVAWAPGVASESI----SEAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSLLFTL 330
+E + + I S YL + S D T++LW + + + L
Sbjct: 523 DVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGY 582
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPY 390
GH+ V F P G Y VS G D+ R+W T + + ++ H V +H Y
Sbjct: 583 KGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNY 642
Query: 391 VVTGSVDKTVKVWE 404
V TGS D+TV++W+
Sbjct: 643 VATGSADRTVRLWD 656
Score = 174 (66.3 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 33/121 (27%), Positives = 60/121 (49%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKL 162
+GH + V +HP + +A+ S D T+RLWD G R GH + + F +G+
Sbjct: 625 AGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRF 684
Query: 163 LVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
L + + D + LWD+ + ++GH V + F + + + S S D T+++W+
Sbjct: 685 LATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
Query: 223 Y 223
+
Sbjct: 745 F 745
Score = 133 (51.9 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/99 (27%), Positives = 44/99 (44%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
Y +G D+ +LW L GH V +HP Y+ + D+T+R+WD N
Sbjct: 600 YFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLN 659
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ H + SL F ++ TG+ D V +W+
Sbjct: 660 GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWD 698
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 257 (95.5 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 58/195 (29%), Positives = 91/195 (46%)
Query: 92 WIPRAPEKF-ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
W P +L GH S + V F L+A+ + TI+LWD E + R L GH +
Sbjct: 44 WAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSN 103
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
+ F G+ S S D +LK+WD+ C+ T +GH V + F P+ +++S
Sbjct: 104 CVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGE 163
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
D +K+W++ G + H ++ + P LLA+ S D T + W L T E
Sbjct: 164 DNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGS- 222
Query: 271 RGHDHT-VECVAWAP 284
G + T V C+ + P
Sbjct: 223 GGTETTGVRCLTFNP 237
Score = 244 (91.0 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 45/165 (27%), Positives = 82/165 (49%)
Query: 120 LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
++ + ED + LW +L+GH + + FD S L+ + +A ++KLWD+
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 90
Query: 180 YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
+ ++T+ GH N V F P +F S S D +K+W++ C+ T GH V ++
Sbjct: 91 AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+PDG + S D+ +VW L + E + H+ ++ + + P
Sbjct: 151 FTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHP 195
Score = 203 (76.5 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 44/159 (27%), Positives = 76/159 (47%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L+GHRS + V FHP AS S D +++WD GH V + F G+
Sbjct: 97 LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGR 156
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
+VS D +K+WD++ + L + H+ + + F P+ + + S DKT+K W++ T
Sbjct: 157 WIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLET 216
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
+ + VR + +PDG + C + +++S
Sbjct: 217 FELIGSGGTETTGVRCLTFNPDGKSVL-CGLQESLKIFS 254
Score = 198 (74.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 37/100 (37%), Positives = 59/100 (59%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
+ A+GS D +K+WD+ + T GH V + F P G+++VS G+D ++VWD
Sbjct: 115 FFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTA 174
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVV-TGSVDKTVKVWE 404
+ + ++H + SLDFH H +++ TGS DKTVK W+
Sbjct: 175 GKLLHEFKSHEGKIQSLDFH-PHEFLLATGSADKTVKFWD 213
Score = 175 (66.7 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 43/138 (31%), Positives = 62/138 (44%)
Query: 272 GHDHTVECVAWAPGVASESIS-----EAAXXXXXXXXXXYLATGSRDKTIKLWDVGSGSL 326
G DH V WA G + +S +A G+ TIKLWD+ +
Sbjct: 36 GEDHKVNL--WAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKV 93
Query: 327 LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR 386
+ TL GH + V FHP G++ S D L++WD K + T + H+ V L F
Sbjct: 94 VRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 387 AHPYVVTGSVDKTVKVWE 404
++V+G D VKVW+
Sbjct: 154 DGRWIVSGGEDNVVKVWD 171
Score = 162 (62.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 34/127 (26%), Positives = 58/127 (45%)
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
+S ++LV+ D + LW + + ++ GH + V F + V + + TIK+W
Sbjct: 27 KSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLW 86
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
++ V+TLTGHR + P G AS S D ++W + K +GH V
Sbjct: 87 DLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGV 146
Query: 278 ECVAWAP 284
+ + P
Sbjct: 147 NVLRFTP 153
Score = 161 (61.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/101 (30%), Positives = 54/101 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK-TLRVWDTAN 365
L TG D + LW +G + + +L GH + + VTF + LV+ G T+++WD
Sbjct: 32 LVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD-ASEGLVAAGAASGTIKLWDLEE 90
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL H S++FH + +GS+D +K+W+ R
Sbjct: 91 AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR 131
Score = 102 (41.0 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRV--WD 362
LATGS DKT+K WD+ + L+ + VR +TF+P GK ++ CG ++L++ W+
Sbjct: 200 LATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL-CGLQESLKIFSWE 256
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 285 (105.4 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 57/181 (31%), Positives = 94/181 (51%)
Query: 105 HRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
H S V ++ L+A+ +D + LW +L GH V+ + + +L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
V+ S S+++WD+ + L+T+ GH N+ + F P +FV S S+D IK+W++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV GH + VR ++ SPDG LAS ++DHT ++W L + +E GH V V +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 284 P 284
P
Sbjct: 199 P 199
Score = 269 (99.8 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 58/184 (31%), Positives = 95/184 (51%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L+GH SPV V + L+ + S+ +IR+WD E + R L GH ++ + F G
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S S D ++KLWD+ C+ +GH V + F P+ ++ SA+ D T+K+W++
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
G + GH V ++ P+ LLAS S+D T R W L + + + G V V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 281 AWAP 284
+ P
Sbjct: 238 LFNP 241
Score = 232 (86.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 52/158 (32%), Positives = 79/158 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH++ + + FHP +AS S+D I+LWD GH +V+ + F GK
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S + D ++KLWD++ + + GH V V F PN + S S D+TI+ W++
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
V + G VR + +PDG L S D + RV+
Sbjct: 221 FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 192 (72.6 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 35/99 (35%), Positives = 56/99 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+GS+D IKLWD+ +F GH VR + F P GK+L S DD T+++WD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ M H+ V ++FH + +GS D+T++ W+
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 166 (63.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATG D + LW + + + +L GH + V V + + +V+ ++RVWD
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL H + SLDFH +V +GS D +K+W+ R
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Score = 155 (59.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F GH V + F P +AS ++D T++LWD G+ GH V + F +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT-IKMWE 218
LL S S+D +++ WD+ +Q + ++G V V F P+ + S +D + WE
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 154 (59.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ GS+ +I++WD+ + +L TL+GH + + FHP G+++ S D +++WD K
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ HS V L F ++ + + D TVK+W+
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDTA 364
+LA+ + D T+KLWD+ +G ++ GH V V FHP +YL++ G D+T+R WD
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT-VKVWE 404
+ + +E V S+ F+ + +G D V WE
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 285 (105.4 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 57/181 (31%), Positives = 94/181 (51%)
Query: 105 HRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLL 163
H S V ++ L+A+ +D + LW +L GH V+ + + +L+
Sbjct: 19 HASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELI 78
Query: 164 VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
V+ S S+++WD+ + L+T+ GH N+ + F P +FV S S+D IK+W++
Sbjct: 79 VAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKG 138
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWA 283
CV GH + VR ++ SPDG LAS ++DHT ++W L + +E GH V V +
Sbjct: 139 CVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFH 198
Query: 284 P 284
P
Sbjct: 199 P 199
Score = 269 (99.8 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 58/184 (31%), Positives = 95/184 (51%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
+L+GH SPV V + L+ + S+ +IR+WD E + R L GH ++ + F G
Sbjct: 58 SLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYG 117
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+ + S S D ++KLWD+ C+ +GH V + F P+ ++ SA+ D T+K+W++
Sbjct: 118 EFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLT 177
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
G + GH V ++ P+ LLAS S+D T R W L + + + G V V
Sbjct: 178 AGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSV 237
Query: 281 AWAP 284
+ P
Sbjct: 238 LFNP 241
Score = 232 (86.7 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 52/158 (32%), Positives = 79/158 (50%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH++ + + FHP +AS S+D I+LWD GH +V+ + F GK
Sbjct: 101 LMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK 160
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L S + D ++KLWD++ + + GH V V F PN + S S D+TI+ W++
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEK 220
Query: 222 GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVW 259
V + G VR + +PDG L S D + RV+
Sbjct: 221 FQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 192 (72.6 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 35/99 (35%), Positives = 56/99 (56%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTAN 365
++A+GS+D IKLWD+ +F GH VR + F P GK+L S DD T+++WD
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTA 178
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ M H+ V ++FH + +GS D+T++ W+
Sbjct: 179 GKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
Score = 166 (63.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 32/100 (32%), Positives = 53/100 (53%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
LATG D + LW + + + +L GH + V V + + +V+ ++RVWD
Sbjct: 36 LATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAA 95
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ ++TL H + SLDFH +V +GS D +K+W+ R
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR 135
Score = 155 (59.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 100 FALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
F GH V + F P +AS ++D T++LWD G+ GH V + F +
Sbjct: 141 FRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN 200
Query: 160 GKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT-IKMWE 218
LL S S+D +++ WD+ +Q + ++G V V F P+ + S +D + WE
Sbjct: 201 EYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
Score = 154 (59.3 bits), Expect = 8.3e-08, P = 8.3e-08
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANK 366
+ GS+ +I++WD+ + +L TL+GH + + FHP G+++ S D +++WD K
Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
Query: 367 RNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ HS V L F ++ + + D TVK+W+
Sbjct: 138 GCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Score = 132 (51.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/101 (32%), Positives = 53/101 (52%)
Query: 306 YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGD-DKTLRVWDTA 364
+LA+ + D T+KLWD+ +G ++ GH V V FHP +YL++ G D+T+R WD
Sbjct: 161 WLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-EYLLASGSSDRTIRFWDLE 219
Query: 365 NKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKT-VKVWE 404
+ + +E V S+ F+ + +G D V WE
Sbjct: 220 KFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE 260
WARNING: HSPs involving 1630 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 406 384 0.00091 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1880
No. of states in DFA: 622 (66 KB)
Total size of DFA: 287 KB (2145 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.06u 0.12s 32.18t Elapsed: 00:00:03
Total cpu time: 32.26u 0.12s 32.38t Elapsed: 00:00:03
Start: Thu Aug 15 16:16:02 2013 End: Thu Aug 15 16:16:05 2013
WARNINGS ISSUED: 2