RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy226
(406 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 246 bits (629), Expect = 7e-80
Identities = 222/316 (70%), Positives = 260/316 (82%), Gaps = 2/316 (0%)
Query: 91 EWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS 150
EWIPR PEK+ALSGHRSPV +VIFHPVFS+M S SEDATI++WDYETG++ER L GH DS
Sbjct: 2 EWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDS 61
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
VQDI+FD SGKLL SCSADM++KLWD ++C++TM GHDHNV+ V+ +PN D ++SASR
Sbjct: 62 VQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR 121
Query: 211 DKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
DKTIKMWEV TGYCVKT TGHREWVR ++ + DGTL+ASCSND T RVW +ATKE KAEL
Sbjct: 122 DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 181
Query: 271 RGHDHTVECVAWAPGVASESISEAAGRPPGQGG--GPYLATGSRDKTIKLWDVGSGSLLF 328
R H H VEC++WAP + SISEA G + G GP+L +GSRDKTIK+WDV +G L
Sbjct: 182 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 241
Query: 329 TLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAH 388
TL+GHDNWVRGV FH GGK+++SC DDKTLRVWD NKR MKTL AH HFVTSLDFH+
Sbjct: 242 TLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 301
Query: 389 PYVVTGSVDKTVKVWE 404
PYVVTGSVD+TVKVWE
Sbjct: 302 PYVVTGSVDQTVKVWE 317
Score = 115 bits (287), Expect = 8e-30
Identities = 83/254 (32%), Positives = 117/254 (46%), Gaps = 39/254 (15%)
Query: 173 KLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHR 232
K W + GH VT V F P ++SAS D TIK+W+ TG +TL GH
Sbjct: 1 KEWI-PRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT 59
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESIS 292
+ V+ I G LLASCS D T ++W E + GHDH V V+ P
Sbjct: 60 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN------- 112
Query: 293 EAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSC 352
G ++ + SRDKTIK+W+V +G + T GH WVR V + G + SC
Sbjct: 113 -----------GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 161
Query: 353 GDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH--------------------RAHPYVV 392
+D+T+RVW A K L H H V + + + P+++
Sbjct: 162 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLL 221
Query: 393 TGSVDKTVKVWECR 406
+GS DKT+K+W+
Sbjct: 222 SGSRDKTIKMWDVS 235
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 167 bits (423), Expect = 4e-49
Identities = 75/352 (21%), Positives = 141/352 (40%), Gaps = 26/352 (7%)
Query: 59 LQKKVIELESKLSEAEKEYVEGAPTRAKRSPTEWIPRAPEKFA--LSGHRSPVIKVIFHP 116
L+++ +L++++ +A K A + + + R + L GH + + + +
Sbjct: 7 LRQEAEQLKNQIRDARKA-CADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGT 65
Query: 117 VFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWD 176
L+ S S+D + +WD T A+ V A+ SG + D +++
Sbjct: 66 DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYN 125
Query: 177 MSTYQCLKTM---QGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
+ T + + + + ++++S D T +W++ TG T TGH
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISE 293
V + ++PD L S + D +A++W + + GH+ + + + P
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN-------- 237
Query: 294 AAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW--VRGVTFHPGGKYLVS 351
G ATGS D T +L+D+ + L T + + V+F G+ L++
Sbjct: 238 ----------GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA 287
Query: 352 CGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
DD VWD L H + V+ L V TGS D +K+W
Sbjct: 288 GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 130 bits (326), Expect = 4e-35
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
H V+ + P L S + DA+ +LWD G + GH + I F +G
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHN--VTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+ S D + +L+D+ Q L T + +T V+F + +L+ D +W+
Sbjct: 243 TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWS 260
L GH V + V+ DG +A+ S D ++W+
Sbjct: 303 DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 122 bits (306), Expect = 3e-32
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 29/255 (11%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+ +T++GH + + + +S ++SAS+D + +W+ T V + WV
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 241 SPDGTLLASCSNDHTARVWSLATKETKAELRGHD-------------------------- 274
+P G +A D+ +++L T+E +
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 275 -HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
+ + +G+ D + KLWDV G T GH
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 334 DNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF--VTSLDFHRAHPYV 391
++ + + F P G + DD T R++D + + T + +TS+ F ++ +
Sbjct: 226 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 285
Query: 392 VTGSVDKTVKVWECR 406
+ G D VW+
Sbjct: 286 LAGYDDFNCNVWDAL 300
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 139 bits (351), Expect = 3e-38
Identities = 76/380 (20%), Positives = 145/380 (38%), Gaps = 71/380 (18%)
Query: 79 EGAPTRAKRSPTEWI----PRAPEKFALS-----GHRSPVIKVIFHPVFSLMASCSEDAT 129
+ P K+ ++ P P + + H S V V F +A+ + T
Sbjct: 26 QSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKT 84
Query: 130 IRLWDYETGEYERAL------------------HGHLDSVQDIAFDQSGKLLVSCSADMS 171
+++ G L ++ + F GK L + + D
Sbjct: 85 TQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRL 144
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGH 231
+++WD+ + + +QGH+ ++ + + P+ D ++S S D+T+++W++ TG C TL+
Sbjct: 145 IRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE 204
Query: 232 REWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAEL-------RGHDHTVECVAWAP 284
DG +A+ S D RVW T L GH +V V +
Sbjct: 205 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 264
Query: 285 GVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF------------TLIG 332
G + +GS D+++KLW++ + + T IG
Sbjct: 265 D------------------GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLD------FHR 386
H ++V V +Y++S D+ + WD + + L+ H + V S+
Sbjct: 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGP 366
Query: 387 AHPYVVTGSVDKTVKVWECR 406
+ TGS D ++W+ +
Sbjct: 367 EYNVFATGSGDCKARIWKYK 386
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 126 bits (317), Expect = 9e-34
Identities = 81/350 (23%), Positives = 126/350 (36%), Gaps = 73/350 (20%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS-- 159
L GH VI + + S S+D T+++W TG+ R L GH V +
Sbjct: 12 LKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNII 70
Query: 160 ------------------------------------GKLLVSCSADMSLKLWDMSTYQCL 183
K +VS S D +L++WD+ T QCL
Sbjct: 71 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCL 130
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPD 243
+ GH V + V+S + D +K+W+ T C+ TL GH V + D
Sbjct: 131 HVLMGHVAAV--RCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL--QFD 186
Query: 244 GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGG 303
G + S S D + RVW + T L GH +
Sbjct: 187 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN------------------ 228
Query: 304 GPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLRVWD 362
L +G+ D T+K+WD+ +G L TL G + VT ++++ DD T+++WD
Sbjct: 229 --ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 286
Query: 363 TANKRNMKTLEA-----HSHFVTSLDFHRAHPYVVTGSVDKT----VKVW 403
++ L V + GS + T + V
Sbjct: 287 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 122 bits (305), Expect = 4e-32
Identities = 77/313 (24%), Positives = 131/313 (41%), Gaps = 64/313 (20%)
Query: 133 WDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN 192
W + + L GH D V G +VS S D +LK+W T +CL+T+ GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 193 VTGVAFLPN--------------------------------------SDFVLSASRDKTI 214
V N V+S SRD T+
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
++W++ TG C+ L GH VR ++ + S + D +VW T+ L+GH
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRR--VVSGAYDFMVKVWDPETETCLHTLQGHT 177
Query: 275 HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+ V + + G ++ +GS D +I++WDV +G+ + TL GH
Sbjct: 178 NRVYSLQF--------------------DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 217
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHP-YVVT 393
+ G+ LVS D T+++WD + ++TL+ + +++ + + +V+T
Sbjct: 218 SLTSGMELKD--NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVIT 275
Query: 394 GSVDKTVKVWECR 406
S D TVK+W+ +
Sbjct: 276 SSDDGTVKLWDLK 288
Score = 112 bits (281), Expect = 1e-28
Identities = 71/251 (28%), Positives = 114/251 (45%), Gaps = 32/251 (12%)
Query: 121 MASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
+ S S DAT+R+WD ETG+ L GH+ +V+ + +D + +VS + D +K+WD T
Sbjct: 110 VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYDFMVKVWDPETE 167
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
CL T+QGH + V + F + V+S S D +I++W+V TG C+ TLTGH+ +
Sbjct: 168 TCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG--M 223
Query: 241 SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPG 300
+L S + D T ++W + T + L+G + V
Sbjct: 224 ELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-------------- 269
Query: 301 QGGGPYLATGSRDKTIKLWDVGSGSLLFTLI-----GHDNWVRGVTFHPGGKYLVSCGDD 355
++ T S D T+KLWD+ +G + L+ G V + +
Sbjct: 270 ---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 326
Query: 356 KT----LRVWD 362
T L V D
Sbjct: 327 GTEETKLLVLD 337
Score = 93.3 bits (230), Expect = 9e-22
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
L GH + V + F + S S D +IR+WD ETG L GH +
Sbjct: 173 LQGHTNRVYSLQFDG--IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDN 228
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQG-HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVA 220
+LVS +AD ++K+WD+ T QCL+T+QG + H N +FV+++S D T+K+W++
Sbjct: 229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK 288
Query: 221 TGYCVKTLT-----GHREWVRQIKVSPDGTLLASCSNDHTA----RVWSL 261
TG ++ L G V +I+ S + A S + T V
Sbjct: 289 TGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
>d1uuja_ a.221.1.1 (A:) Lissencephaly-1 protein (Lis-1, PAF-AH
alpha) N-terminal domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 76
Score = 115 bits (290), Expect = 1e-32
Identities = 54/76 (71%), Positives = 66/76 (86%), Gaps = 2/76 (2%)
Query: 2 VLSQRQREELNKAVADYLLSNGYLSALEGFKKDADLP--AEVEKKYSGLLEKKWTSVIRL 59
VLSQRQR+ELN+A+ADYL SNGY A FKK+A+L E++KKY+GLLEKKWTSVIRL
Sbjct: 1 VLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIRL 60
Query: 60 QKKVIELESKLSEAEK 75
QKKV+ELESKL+EA++
Sbjct: 61 QKKVMELESKLNEAKE 76
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 118 bits (295), Expect = 3e-31
Identities = 67/310 (21%), Positives = 114/310 (36%), Gaps = 74/310 (23%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG 160
S V + + + S D TI++WD T E +R L GH SV + +D+
Sbjct: 10 CRSETSKGVYCLQYDD--QKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERV 67
Query: 161 KLLVSCSADM--------------------------------------SLKLWDMSTYQC 182
+ S + + S+ +WDM++
Sbjct: 68 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD 127
Query: 183 L-KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241
+ H + +++SAS D+TIK+W +T V+TL GH+ + +
Sbjct: 128 ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL--Q 185
Query: 242 PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQ 301
L+ S S+D+T R+W + L GH+ V C+ +
Sbjct: 186 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN----------------- 228
Query: 302 GGGPYLATGSRDKTIKLWDVGSG---------SLLFTLIGHDNWVRGVTFHPGGKYLVSC 352
+ +G+ D IK+WD+ + L TL+ H V + F +VS
Sbjct: 229 ---KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSS 283
Query: 353 GDDKTLRVWD 362
D T+ +WD
Sbjct: 284 SHDDTILIWD 293
Score = 94.1 bits (232), Expect = 2e-22
Identities = 50/266 (18%), Positives = 98/266 (36%), Gaps = 29/266 (10%)
Query: 142 RALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPN 201
V + +D + +VS D ++K+WD +T +C + + GH +V + +
Sbjct: 9 HCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--- 63
Query: 202 SDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
D + + + T + + + ++ +CS D + VW +
Sbjct: 64 -DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 262 A-TKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWD 320
A + H Y+ + S D+TIK+W+
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDD------------------KYIVSASGDRTIKVWN 164
Query: 321 VGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVT 380
+ + TL GH + + + + +VS D T+R+WD ++ LE H V
Sbjct: 165 TSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 222
Query: 381 SLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +V+G+ D +KVW+
Sbjct: 223 --CIRFDNKRIVSGAYDGKIKVWDLV 246
Score = 74.9 bits (182), Expect = 1e-15
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 223 YCVKTLTGHREWVRQIK-VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA 281
+ ++ + E + + + D + S D+T ++W T E K L GH +V C+
Sbjct: 3 HSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 282 WAPGVASESISEAAGRPPGQGGGPYLATGS--------------------RDKTIKLWDV 321
+ V S++ R G L T +D++I +WD+
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 322 GSGSLL---FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
S + + L+GH V V F S D+T++VW+T+ ++TL H
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIV--SASGDRTIKVWNTSTCEFVRTLNGHKRG 180
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ L + VV+GS D T+++W+
Sbjct: 181 IACLQYR--DRLVVSGSSDNTIRLWDIE 206
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 113 bits (282), Expect = 7e-29
Identities = 49/350 (14%), Positives = 109/350 (31%), Gaps = 45/350 (12%)
Query: 97 PEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAF 156
P++ L GH + VI + + + ++D IR++D ++ L GH V + +
Sbjct: 3 PQRTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY 61
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHD-HNVTGVAFLPNSDFVLSASRDKTIK 215
G L+ + + + N ++++ SRD T+
Sbjct: 62 AHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH 121
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+W++ V ++ + H A V +++ +D+
Sbjct: 122 VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDN 181
Query: 276 TVECVAWAPGVASESISEAAGR---PPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332
T+ A +S R + S D TI++WD+ +G L++TL G
Sbjct: 182 TLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 241
Query: 333 HDNW--------------------------------------VRGVTFHPGGKYLVSCGD 354
H + +T ++ G
Sbjct: 242 HTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 301
Query: 355 DKTLRVWDTANKRNMK-TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ +++ + + + + + + S++F V D +
Sbjct: 302 ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDGQSFLE 350
Score = 84.9 bits (208), Expect = 8e-19
Identities = 56/306 (18%), Positives = 106/306 (34%), Gaps = 45/306 (14%)
Query: 144 LHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
L GH+ SV +++ + D ++++D + L + GHD V + +
Sbjct: 8 LRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG- 65
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHR--EWVRQIKVSPDGTLLASCSNDHTARVWSL 261
++S S D+T+++W++ G C GH I + + + S D+T VW L
Sbjct: 66 ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKL 125
Query: 262 ATKETKAELRGHDHTVECVA---WAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKL 318
+ + + P A G G + +GS D T+ +
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIV 185
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
WDV L+ L GH + + + K +S D T+R+WD N M TL+ H+
Sbjct: 186 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 245
Query: 379 --------------------------------------VTSLDFHRAHPYVVTGSVDKTV 400
++++ ++ +
Sbjct: 246 VGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQF 305
Query: 401 KVWECR 406
++ R
Sbjct: 306 NIYNLR 311
Score = 79.9 bits (195), Expect = 4e-17
Identities = 53/242 (21%), Positives = 92/242 (38%), Gaps = 39/242 (16%)
Query: 185 TMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244
T++GH +V ++V++ + DK I++++ + L+GH V +K + G
Sbjct: 7 TLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG 65
Query: 245 TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGG 304
L S S D T RVW + GH+ TV C+
Sbjct: 66 I-LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI----------------VEYKNI 108
Query: 305 PYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT---------------------FH 343
Y+ TGSRD T+ +W + S + ++
Sbjct: 109 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS 168
Query: 344 PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
G +VS D TL VWD A + + L H+ + S + ++ S+D T+++W
Sbjct: 169 GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 228
Query: 404 EC 405
+
Sbjct: 229 DL 230
Score = 66.8 bits (161), Expect = 8e-13
Identities = 57/306 (18%), Positives = 108/306 (35%), Gaps = 48/306 (15%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSG- 160
LSGH V + + ++ S S D T+R+WD + G GH +V+ + +
Sbjct: 49 LSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKN 107
Query: 161 -KLLVSCSADMSLKLWDMSTYQCLKTMQGHD---------------------HNVTGVAF 198
K +V+ S D +L +W + + H +
Sbjct: 108 IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 167
Query: 199 LPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARV 258
+ + V+S S D T+ +W+VA C+ L+GH + + + S S D T R+
Sbjct: 168 SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRI 227
Query: 259 WSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQG---------------- 302
W L E L+GH V + + + ++ + R
Sbjct: 228 WDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAI 287
Query: 303 -----GGPYLATGSRDKTIKLWDVGSGSLL-FTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
L +GS + ++++ SG L+ ++ + + V F + + D
Sbjct: 288 TTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKT-LVAAVEKDG 345
Query: 357 TLRVWD 362
+
Sbjct: 346 QSFLEI 351
Score = 66.5 bits (160), Expect = 1e-12
Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 6/171 (3%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
+ + + LSGH + I+ S S D TIR+WD E GE L GH V
Sbjct: 187 DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV 246
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRD 211
+ + + + + H N++ + SD +L + +
Sbjct: 247 GLLRLSDKFLVSAAADGSI----RGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSE 302
Query: 212 KTIKMWEVATGYCVK-TLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSL 261
++ + +G V + + + + TL+A+ D + + L
Sbjct: 303 NQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL 352
Score = 31.4 bits (69), Expect = 0.20
Identities = 6/35 (17%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE 136
+ + V F +L+A+ +D L +
Sbjct: 320 ILKDADQIWSVNFKG-KTLVAAVEKDGQSFLEILD 353
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 111 bits (278), Expect = 2e-28
Identities = 46/301 (15%), Positives = 90/301 (29%), Gaps = 33/301 (10%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL-----HG 146
IPR + H V V + + +++WD + +
Sbjct: 37 GIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLN 95
Query: 147 HLDSVQDIAFDQSGKLLVSCSAD--MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDF 204
+ ++ G L+ +S+ T + + +A P+S
Sbjct: 96 RDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKV 155
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
S D I +W++ V+ GH + I +S DGT L + D+T R W L
Sbjct: 156 CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQG---------------------- 302
+ + + + P ++ +
Sbjct: 216 RQLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFA 274
Query: 303 -GGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVW 361
G + + +D + W G+ +F + V KY+V+ DK V+
Sbjct: 275 YCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVY 333
Query: 362 D 362
+
Sbjct: 334 E 334
Score = 82.9 bits (203), Expect = 3e-18
Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 3/148 (2%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLK 173
+ + + D T+R + H + + + +G+ ++ + S
Sbjct: 191 ISNDGTKLWTGGLDNTVR-SWDLREGRQLQQHDFTSQIFSLGYCPTGEW-LAVGMESSNV 248
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHRE 233
+ H+ V + F + +S +D + W G +
Sbjct: 249 EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESS 307
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSL 261
V +S D + + S D A V+ +
Sbjct: 308 SVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 78.3 bits (191), Expect = 1e-16
Identities = 43/287 (14%), Positives = 78/287 (27%), Gaps = 25/287 (8%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLK 184
DA I L H + V + + + + +K+WD+S
Sbjct: 29 PPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86
Query: 185 T-----MQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIK 239
D+ + LP+ ++ T+ +W++A
Sbjct: 87 PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYA 146
Query: 240 VSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPP 299
++ S + + HT
Sbjct: 147 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI----------------D 190
Query: 300 GQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLR 359
G L TG D T++ WD+ G L + + + + P G++L +
Sbjct: 191 ISNDGTKLWTGGLDNTVRSWDLREGRQLQQ-HDFTSQIFSLGYCPTGEWLAVGMESSN-V 248
Query: 360 VWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
NK + L H V SL F + V+ D + W
Sbjct: 249 EVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295
Score = 74.1 bits (180), Expect = 3e-15
Identities = 40/253 (15%), Positives = 72/253 (28%), Gaps = 21/253 (8%)
Query: 69 KLSEAEKEYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDA 128
KL + G P K L+ + P + SC D
Sbjct: 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG 163
Query: 129 TIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQG 188
I +WD R GH D I G L + D +++ WD+ +
Sbjct: 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ-LQQHD 222
Query: 189 HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLA 248
+ + + P +++ +++ V + H V +K + G
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL-HLHESCVLSLKFAYCGKWFV 281
Query: 249 SCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA 308
S D+ W + + +V + Y+
Sbjct: 282 STGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVD------------------DKYIV 322
Query: 309 TGSRDKTIKLWDV 321
TGS DK +++V
Sbjct: 323 TGSGDKKATVYEV 335
Score = 64.1 bits (154), Expect = 6e-12
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 7/108 (6%)
Query: 303 GGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
G D I + TL H V VT +++ + G ++VWD
Sbjct: 21 GQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTRHVYTGGKG-CVKVWD 78
Query: 363 TANKRNMKTLE-----AHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
++ N + +++ S ++ G T+ +W+
Sbjct: 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 110 bits (275), Expect = 7e-28
Identities = 31/322 (9%), Positives = 76/322 (23%), Gaps = 35/322 (10%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERAL-HGHLDSVQDIAFDQSGK-LLVSCSAD 169
M + + + D + ++ + V +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 170 MSLKLWDMSTYQCLK------TMQGHDHNVTGVAFLPNSDFVLSASRDKT---------- 213
+ D+ T + ++ A P+ V +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 214 --IKMWEVATGYCVKTLTGHREW--VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAE 269
++++ A G K + V ++ + DG+L + + + + T +
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIY---KMDVKTGKYTVA 178
Query: 270 LRGHDHTVECV-------AWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVG 322
L + + W S + AT D+
Sbjct: 179 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 238
Query: 323 SGSLLFTLIG-HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTS 381
+G P + + L +D ++ +K H
Sbjct: 239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYC 296
Query: 382 LDFHRAHPYVVTGSVDKTVKVW 403
+ F + + G + V+
Sbjct: 297 VAFDKKGDKLYLGGTFNDLAVF 318
Score = 87.9 bits (216), Expect = 7e-20
Identities = 35/284 (12%), Positives = 71/284 (25%), Gaps = 31/284 (10%)
Query: 120 LMASCSEDATIRLWDYETGEYERALH------GHLDSVQDIAFDQSGKLLVSCSAD---- 169
+ I D +T + + S+ A GK + +
Sbjct: 54 AYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL 113
Query: 170 --------MSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
L+++ + K ++ V + +D I +V T
Sbjct: 114 NDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR-QVYLMRAADDGSLYVAGPDIYKMDVKT 172
Query: 222 GYCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
G L W R+ +PD S H + + + +
Sbjct: 173 GKYTVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231
Query: 281 AWAPGVASESISEAAGRPPG--------QGGGPYLATGSRDKTIKLWDVGSGSLLFTLIG 332
+ + + P G + + +D+ L+
Sbjct: 232 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKA-AN 289
Query: 333 HDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHS 376
D+ V F G L G L V++ +K ++
Sbjct: 290 LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 333
Score = 76.7 bits (187), Expect = 4e-16
Identities = 28/286 (9%), Positives = 62/286 (21%), Gaps = 44/286 (15%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQ-GHDHNVTGVAFLPNSDFVL-SASRD 211
A + ++ + +L + D+++ K+ P++ +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 212 KTIKMWEVATGYCVKTLT------GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
I ++ T + +SPDG + + N K
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS 325
+ E+ +E + G I DV +G
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-------LYVAGPDIYKMDVKTGK 174
Query: 326 LLFTLIGHDNWVRGVTFH--------------------------PGGKYLVSCGDDKTLR 359
L NW R + +
Sbjct: 175 YTVALPLR-NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233
Query: 360 VWDTAN-KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
D K + + + + P + G + ++
Sbjct: 234 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYD 278
Score = 70.9 bits (172), Expect = 4e-14
Identities = 20/213 (9%), Positives = 48/213 (22%), Gaps = 8/213 (3%)
Query: 195 GVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT-GHREWVRQIKVSPDG-TLLASCSN 252
G A ++++ + + + +VA+ K+ + ++PD T ++
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR 312
L T + E A + +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 313 DKTIKLWDVGSGSLLFTLIGHD--NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK 370
++++ G + V + G V+ D D +
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDI---YKMDVKTGKYTV 177
Query: 371 TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
L + Y +
Sbjct: 178 ALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSM 209
Score = 30.5 bits (67), Expect = 0.35
Identities = 4/48 (8%), Positives = 14/48 (29%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE 139
+ + + + V F + + +++ +T E
Sbjct: 277 YDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 324
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 109 bits (271), Expect = 4e-27
Identities = 56/363 (15%), Positives = 106/363 (29%), Gaps = 63/363 (17%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL------------HGHL 148
A H + + V S SCS D +++WD + + E H+
Sbjct: 9 AGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 149 DSVQDIAFDQS-GKLLVSCSADMSLKLWDMSTYQCLKTMQG----------HDHNVTGVA 197
D +Q I D L+ + S L + ++ K + H+ +
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 198 FLPNSD-----FVLSASRDKTIKMWEVATGY------------------CVKTLTGHREW 234
+ ++D +++ T +W+ V++ ++
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186
Query: 235 VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEA 294
+ +S G L+A+ N+ T ++ T L + + + + S S
Sbjct: 187 ATSVDISERG-LIATGFNNGTVQIS---ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 242
Query: 295 AGRPPGQGGG-------PYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK 347
Y S H +WV ++F+ G+
Sbjct: 243 GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE 302
Query: 348 YLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV----TSLDFHRAHPYVVTGSVDKTVKVW 403
L S G D LR WD K + TL H + L + V +
Sbjct: 303 TLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 362
Query: 404 ECR 406
+
Sbjct: 363 KGW 365
Score = 88.4 bits (217), Expect = 7e-20
Identities = 25/261 (9%), Positives = 74/261 (28%), Gaps = 43/261 (16%)
Query: 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC------VKTLTGHREWV 235
+ HD ++ V+ + F +S S D +K+W+ + H+ +
Sbjct: 6 TANAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 236 RQIKV-------SPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288
+ V + + L+A+ S + + ++ ++ +
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH--- 120
Query: 289 ESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG------------------SLLFTL 330
+ G + L T +W + +
Sbjct: 121 SFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESP 180
Query: 331 IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNM------KTLEAHSHFVTSLDF 384
+ + V G + + ++ T+++ + + R + ++ +S+ + S+ F
Sbjct: 181 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 239
Query: 385 HRAHPYVVTGSVDKTVKVWEC 405
+ +
Sbjct: 240 SPQGSLLAIAHDSNSFGCITL 260
Score = 81.4 bits (199), Expect = 1e-17
Identities = 38/321 (11%), Positives = 88/321 (27%), Gaps = 73/321 (22%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERAL----------HGHLDSVQDIAFDQSG--- 160
L+A+ S + + + + + S + + S
Sbjct: 75 DAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL 134
Query: 161 --KLLVSCSADMSLKLWDMSTYQ------------------CLKTMQGHDHNVTGVAFLP 200
LV+ + +W + +++ T V
Sbjct: 135 LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISE 194
Query: 201 NSDFVLSASRDKTIK------MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254
+ + + T++ + + ++ + +R +K SP G+LLA + +
Sbjct: 195 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN 253
Query: 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK 314
+ +L E + +V + + + S G L + D
Sbjct: 254 SFGCITLYETEFGERI--GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG 311
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVR----GVTFHPGGKYLVSCG----------------- 353
++ WDV + + TL H + + + G L G
Sbjct: 312 KLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 371
Query: 354 ----------DDKTLRVWDTA 364
D+++R + A
Sbjct: 372 DLNESLCCVCLDRSIRWFREA 392
Score = 69.1 bits (167), Expect = 2e-13
Identities = 31/207 (14%), Positives = 65/207 (31%), Gaps = 30/207 (14%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHL------DSVQDIA 155
V L+A+ + T+++ + T +S++ +
Sbjct: 180 PMTPSQFATSVDISER-GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 238
Query: 156 FDQSGKLLVSCSAD---MSLKLWDMSTYQCLKTMQGHDHN-------------VTGVAFL 199
F G LL + L++ + + ++ H+ V ++F
Sbjct: 239 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 298
Query: 200 PNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQ----IKVSPDGTLLASCSNDHT 255
+ + + SA D ++ W+V T + TL H + + + V G LA
Sbjct: 299 DSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD- 357
Query: 256 ARVWSLATKETKAELRGHDHTVECVAW 282
V L + ++ CV
Sbjct: 358 --VKFLKKGWRSGMGADLNESLCCVCL 382
Score = 56.4 bits (134), Expect = 2e-09
Identities = 23/137 (16%), Positives = 46/137 (33%), Gaps = 19/137 (13%)
Query: 88 SPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGH 147
S + + H S V+ + F+ + S D +R WD +T E L+ H
Sbjct: 271 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 330
Query: 148 LDSVQD----IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD 203
D ++ +A D+ G L ++D+ ++
Sbjct: 331 CDDIEIEEDILAVDEHGDSLAEPG------VFDVKFL---------KKGWRSGMGADLNE 375
Query: 204 FVLSASRDKTIKMWEVA 220
+ D++I+ + A
Sbjct: 376 SLCCVCLDRSIRWFREA 392
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 107 bits (266), Expect = 1e-26
Identities = 32/309 (10%), Positives = 81/309 (26%), Gaps = 30/309 (9%)
Query: 120 LMASCSEDATIRLWDYETGEYER--ALHGHLDSVQDIAFDQSGK-LLVSCSADMSLKLWD 176
+ + + + + D E ++ + + G+ + + SL D
Sbjct: 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKID 62
Query: 177 MSTYQCLKTMQGHD-----HNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC------- 224
+ T + L + ++ G A P+ + +++
Sbjct: 63 LVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDA 122
Query: 225 ----VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
+ + + + DG+ L D V + E
Sbjct: 123 ETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDL--HVMDPEAGTLVEDKPIQSWEAETY 180
Query: 281 AWAPGVASESISEAAGR-----PPGQGGGPYLATGSRDKTIKLWDVGSGSLLFT-LIGHD 334
A +A + E++G + + + D+ +G + + D
Sbjct: 181 AQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD 240
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
+ +P L +D ++K + H S++ V G
Sbjct: 241 VFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLG 297
Query: 395 SVDKTVKVW 403
+ +
Sbjct: 298 GALGDLAAY 306
Score = 90.2 bits (222), Expect = 1e-20
Identities = 31/290 (10%), Positives = 68/290 (23%), Gaps = 27/290 (9%)
Query: 120 LMASCSEDATIRLWDYETGEYERALHGH-----LDSVQDIAFDQSGKLLVSCSADMSLKL 174
A+ ++ ++ D TGE + + S+ A GK L + + L+L
Sbjct: 48 AYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLEL 107
Query: 175 WDMSTYQC-----------LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY 223
+ +T +A+ + + RD + E G
Sbjct: 108 THFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE--AGT 165
Query: 224 CVKTLTGHREWVRQ------IKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
V+ + V + + + A G
Sbjct: 166 LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMD 225
Query: 278 ECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
+ ++ +D+ + + + +
Sbjct: 226 LETGEMAMREVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKNASIKR-VPLPHSY 282
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRA 387
V G + G L +D ++ + SL R
Sbjct: 283 YSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRL 332
Score = 71.8 bits (174), Expect = 2e-14
Identities = 24/265 (9%), Positives = 55/265 (20%), Gaps = 23/265 (8%)
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDH--NVTGVAFLPNSDFVL-SASRDKTIKMW 217
+++ + L + D K + D P + ++ +++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 218 EVATGYCVKTLTGHREW-----VRQIKVSPDGTLLASCSNDHTARVWSLATKE------- 265
++ TG + + + +SPDG LA + + +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 266 ----TKAELRGHDHTVECVAWAPG---VASESISEAAGRPPGQGGGPYLATGSRDKTIKL 318
++ + + +AWA + P S +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYA 181
Query: 319 WDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
T L D M E
Sbjct: 182 QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET-GEMAMREVRIMD 240
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVW 403
V ++ +
Sbjct: 241 VFYFSTAVNPAKTRAFGAYNVLESF 265
Score = 69.8 bits (169), Expect = 8e-14
Identities = 25/209 (11%), Positives = 53/209 (25%), Gaps = 9/209 (4%)
Query: 203 DFVLSASRDKTIKMWEVATGYCVKTLT--GHREWVRQIKVSPDG-TLLASCSNDHTARVW 259
D++L+ +R + + + K +T V+P G A+ + +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLW 319
L T ET + + S A + + L+
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTH-FEVQPTRVALY 120
Query: 320 DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH-- 377
D + S + + + G L G D + + K +++
Sbjct: 121 DAETLSRRKA-FEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET 179
Query: 378 --FVTSLDFHRAHPYVVTGSVDKTVKVWE 404
L H + +
Sbjct: 180 YAQPDVLAVWNQHESSGVMATPFYTARKD 208
Score = 33.2 bits (74), Expect = 0.052
Identities = 7/67 (10%), Positives = 17/67 (25%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
+ V S + + +D ET E + + ++
Sbjct: 265 FDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNAS 324
Query: 152 QDIAFDQ 158
+A +
Sbjct: 325 MSLASVR 331
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 106 bits (263), Expect = 3e-26
Identities = 32/329 (9%), Positives = 84/329 (25%), Gaps = 41/329 (12%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE---RALHGHLDSVQDIAF-D 157
+ + + P SL+ S D ++ ++ ++ + + F D
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 158 QSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDK-TIKM 216
+ + + + D+ + + ++ N+ D L A+ I++
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEV 126
Query: 217 WEVATGYCVKTLTGHREWVRQ------IKVSPDGTLLASCSNDHTARVWSLATKETKAEL 270
+ + + + + L N+ + + L E
Sbjct: 127 IDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT 186
Query: 271 RGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTL 330
+ + A S D + + +
Sbjct: 187 IEESGLKYQIRDVALL--------------PKEQEGYACSSIDGRVAVEFFDDQGDDYNS 232
Query: 331 ---------------IGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAH 375
V + F P K+L + G D + W+ ++ +K
Sbjct: 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292
Query: 376 SHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ + + + + + D T K
Sbjct: 293 -NEDSVVKIACSDNILCLATSDDTFKTNA 320
Score = 70.3 bits (170), Expect = 6e-14
Identities = 18/146 (12%), Positives = 40/146 (27%), Gaps = 20/146 (13%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGE---------------YERALHGHLD 149
+ A S D + + ++
Sbjct: 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252
Query: 150 SVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS 209
V I F K L + +D + W++ T + +K + + V + + + A+
Sbjct: 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLAT 311
Query: 210 RDKTIKMWEVATGYCVKTLTGHREWV 235
D T K +T+ + +
Sbjct: 312 SDDTFKTN----AAIDQTIELNASSI 333
Score = 69.9 bits (169), Expect = 7e-14
Identities = 18/170 (10%), Positives = 46/170 (27%), Gaps = 20/170 (11%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDS----VQDIAFDQSGKLLVSCSAD 169
S + ++ ++ + E + + + S D
Sbjct: 156 MDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215
Query: 170 MSLKLWDMST---------------YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTI 214
+ + ++ + V + F P F+ +A D I
Sbjct: 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGII 275
Query: 215 KMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
W + T +K +K++ +L ++D T + + +
Sbjct: 276 SCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQ 324
Score = 67.6 bits (163), Expect = 4e-13
Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 224 CVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR---GHDHTVECV 280
V+ ++++ IK+ P +LL S D + V+ + +L + H + C
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 281 AWAP 284
+
Sbjct: 63 NFID 66
Score = 60.2 bits (144), Expect = 9e-11
Identities = 10/79 (12%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA---HSHFVTSLDFHRAH 388
+++ + P L+ D +L V+ + L + H + +F
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68
Query: 389 P-YVVTGSVDKTVKVWECR 406
+ G+V + +
Sbjct: 69 DLQIYVGTVQGEILKVDLI 87
Score = 59.5 bits (142), Expect = 2e-10
Identities = 15/114 (13%), Positives = 35/114 (30%), Gaps = 5/114 (4%)
Query: 76 EYVEGAPTRAKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDY 135
E+ + S + PV + F P + + D I W+
Sbjct: 221 EFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNL 280
Query: 136 ETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGH 189
+T + + + + S +L ++D + K +T++ +
Sbjct: 281 QTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNA----AIDQTIELN 329
Score = 44.8 bits (104), Expect = 9e-06
Identities = 4/37 (10%), Positives = 17/37 (45%)
Query: 370 KTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWECR 406
+ +A +++ + + ++ S D ++ V++
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFD 41
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 103 bits (257), Expect = 2e-25
Identities = 47/309 (15%), Positives = 89/309 (28%), Gaps = 9/309 (2%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQSG 160
S P+ ++ + +A C + + +++ ++ L H V + +
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDH--NVTGVAFLPNSDFVLSASRDKTIKMWE 218
+V+C D + +W + T+ V + PN S + I +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 219 VAT----GYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHD 274
C R V + P+ LLA+ S D R++S KE +
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP 183
Query: 275 HTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
+ S S G +A S D T+ L D + TL
Sbjct: 184 WGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 243
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTG 394
+ VTF + + D ++ + +
Sbjct: 244 LPLLAVTFITESSLVAAGHDCFP-VLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 302
Query: 395 SVDKTVKVW 403
++DK
Sbjct: 303 NLDKKASSE 311
Score = 87.2 bits (214), Expect = 1e-19
Identities = 43/330 (13%), Positives = 91/330 (27%), Gaps = 48/330 (14%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYE--RALHGHLDSVQDIAFDQS 159
L H V V + P + + +C D +W + ++ + + + + + +
Sbjct: 47 LKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN 106
Query: 160 GKLLVSCSADMSLKLWDMSTYQ----CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIK 215
K S + + C + V + + PNS + + S D +
Sbjct: 107 EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCR 166
Query: 216 MWEVATG------------------YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTAR 257
++ + + WV + S +G+ +A S+D T
Sbjct: 167 IFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC 226
Query: 258 VWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIK 317
+ K A L + V + +A G D
Sbjct: 227 LADADKKMAVATLASETLPLLAVTFIT------------------ESSLVAAGH-DCFPV 267
Query: 318 LWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSH 377
L+ S + + G + + + DK +A H +
Sbjct: 268 LFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSA-AAGAGLDSLHKN 326
Query: 378 FVTSLDFHRAHPY----VVTGSVDKTVKVW 403
V+ + T +D + +W
Sbjct: 327 SVSQISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 79.1 bits (193), Expect = 7e-17
Identities = 44/265 (16%), Positives = 77/265 (29%), Gaps = 48/265 (18%)
Query: 105 HRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLV 164
RS V+ + +HP L+A+ S D R++ E V
Sbjct: 140 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKE------------------------V 175
Query: 165 SCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYC 224
+ M + + V GV F N V S D T+ + +
Sbjct: 176 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA 235
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
V TL + + + +L+A+ + +++ + K G + +
Sbjct: 236 VATLASETLPLLAVTFITESSLVAAGHDCFP-VLFTYDSAAGKLSFGGRLDVPKQSSQRG 294
Query: 285 GVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
A E + GS L H N V ++
Sbjct: 295 LTARERF--------QNLDKKASSEGSAAAGAGLDS-----------LHKNSVSQISVLS 335
Query: 345 GGKY----LVSCGDDKTLRVWDTAN 365
GGK + G D + +WD +
Sbjct: 336 GGKAKCSQFCTTGMDGGMSIWDVRS 360
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 101 bits (251), Expect = 2e-24
Identities = 36/312 (11%), Positives = 79/312 (25%), Gaps = 22/312 (7%)
Query: 104 GHRSPVIKVIFHPVFSLMASCSED--ATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
+ V + + ++DY TG+ +L +V + D++GK
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-AEKFEENLGNVFAMGVDRNGK 98
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA----------SRD 211
V + + D+ T + + + +T NS F+
Sbjct: 99 FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVM 158
Query: 212 KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELR 271
+ I ++++ T D L S E+
Sbjct: 159 QAIHVYDMEGRKIFAA-TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 217
Query: 272 GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI 331
+ + +P + G L + + D G ++ L
Sbjct: 218 SKPFVIPLIPGSPNPTKLVPRSM----TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLE 273
Query: 332 GHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
Y + L +D ++ + + +T L V
Sbjct: 274 SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK----VTEVKNNLTDLRLSADRKTV 329
Query: 392 VTGSVDKTVKVW 403
+ D + +
Sbjct: 330 MVRKDDGKIYTF 341
Score = 93.0 bits (229), Expect = 1e-21
Identities = 29/298 (9%), Positives = 67/298 (22%), Gaps = 31/298 (10%)
Query: 92 WIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
+ R + + V + ++ I D ETG+ +
Sbjct: 71 YDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI 130
Query: 152 QDIAFDQSGKLLVSCSADMSLKLWDMST---------YQCLKTMQGHDHNVTGVAFLPNS 202
D + + + + + + + + AF +S
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADS 190
Query: 203 DFVLSASRDKTIKMWEVATGYC-------VKTLTGHREWVRQIKVSPDGTLLASCSNDHT 255
+ S + + K+ P + D
Sbjct: 191 KNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLN 250
Query: 256 ARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKT 315
R V+ + + ES P Y
Sbjct: 251 DMYK-----------RSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGV 299
Query: 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLE 373
+ +DV + + N + + K ++ DD + + + +T+E
Sbjct: 300 LLKYDVKTR----KVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
Score = 84.5 bits (207), Expect = 1e-18
Identities = 29/302 (9%), Positives = 63/302 (20%), Gaps = 29/302 (9%)
Query: 119 SLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSAD--MSLKLWD 176
L+A S + D + ++ + K+ L ++D
Sbjct: 16 DLIAFVSRG-QAFIQDVSGTYVLKVPEP--LRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 177 MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVR 236
T + + + + NV + N F + A+ I ++ TG +
Sbjct: 73 YRTGK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMIT 131
Query: 237 QIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAG 296
+S + +A +
Sbjct: 132 DFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHD---------Y 182
Query: 297 RPPGQGGGPYLATGSRDKTIKLWDVGSGSLLF-------TLIGHDNWVRGVTFHPGGKYL 349
P L S D + F + P
Sbjct: 183 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 350 VS-------CGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKV 402
+ + D + R + LE+ + Y +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 302
Query: 403 WE 404
++
Sbjct: 303 YD 304
Score = 56.8 bits (135), Expect = 1e-09
Identities = 22/253 (8%), Positives = 48/253 (18%), Gaps = 47/253 (18%)
Query: 196 VAFLP-NSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDH 254
F P + D + SR + + +V+ Y +K +R ++ D +
Sbjct: 8 EDFSPLDGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTRE 64
Query: 255 --TARVWSLATKETKAELRGH---------------------------DHTVECVAWAPG 285
++ T + + D
Sbjct: 65 GDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 124
Query: 286 VASESISEAAGRPPGQ------GGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRG 339
I++ + G + I ++D+ + ++
Sbjct: 125 SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYA 183
Query: 340 VTFHPGGKYLVSCGDDKTLRVWDTANKRNM-------KTLEAHSHFVTSLDFHRAHPYVV 392
F K L D +
Sbjct: 184 PAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 243
Query: 393 TGSVDKTVKVWEC 405
G D
Sbjct: 244 AGEYDLNDMYKRS 256
Score = 37.5 bits (85), Expect = 0.002
Identities = 6/50 (12%), Positives = 17/50 (34%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSV 151
++ ++ + + + +D I + E E ER + +
Sbjct: 310 VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 98.5 bits (244), Expect = 2e-23
Identities = 26/278 (9%), Positives = 66/278 (23%), Gaps = 23/278 (8%)
Query: 118 FSLMASCSEDATIRLWDYETGEYERALHGH-------LDSVQDIAFDQSGK-LLVSCSAD 169
F+ A + ++D T + V I S LL
Sbjct: 86 FARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS 145
Query: 170 MSLKLWDMSTYQCLKTMQG-------HDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATG 222
+ + + + T + S V
Sbjct: 146 SAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGA- 204
Query: 223 YCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAW 282
+ + + + G L+ + ++ A KA + G++ + +
Sbjct: 205 ---QCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNF 261
Query: 283 AP-GVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341
G + + + + + G I + + +
Sbjct: 262 RSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP-ISNGHDSDAII 320
Query: 342 FHPGGKYL--VSCGDDKTLRVWDTANKRNMKTLEAHSH 377
G + + L ++D A+ ++ ++E
Sbjct: 321 AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG 358
Score = 77.3 bits (189), Expect = 3e-16
Identities = 23/287 (8%), Positives = 57/287 (19%), Gaps = 49/287 (17%)
Query: 143 ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW--DMSTYQCLKTMQGHDHNVTGVAFLP 200
A G A + + + + + W L G +
Sbjct: 17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGH 74
Query: 201 NSDF----------VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG------ 244
+ R +++++ T + + +
Sbjct: 75 SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCAS 134
Query: 245 --TLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQG 302
LL A S+ + C P G
Sbjct: 135 SACLLFFLFGSSAAAGLSVPGASDDQLTKSAS----CFHIHP-----------------G 173
Query: 303 GGPYLATGSRDKTIKLWDVGSGS------LLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
GS ++ D+ + + + + G + +
Sbjct: 174 AAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSI 233
Query: 357 TLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
A ++ + + +F A +V + +
Sbjct: 234 LQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280
Score = 38.4 bits (88), Expect = 0.001
Identities = 13/141 (9%), Positives = 26/141 (18%), Gaps = 21/141 (14%)
Query: 283 APGVASESISEAAGRPPGQGGGPYL-ATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341
A + S + + L A + + G G L +G ++
Sbjct: 14 AAAASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA--FLSLAV 71
Query: 342 FHPGGKYL----------VSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV 391
G + V+D + +E S+
Sbjct: 72 AGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131
Query: 392 --------VTGSVDKTVKVWE 404
Sbjct: 132 CASSACLLFFLFGSSAAAGLS 152
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 96.8 bits (239), Expect = 6e-23
Identities = 33/293 (11%), Positives = 72/293 (24%), Gaps = 33/293 (11%)
Query: 118 FSLMASCSEDATIRLWDYETGEYERALHGH-------LDSVQDIAFDQSGKLLV--SCSA 168
FS +A + ++D T + + GK L+ S
Sbjct: 68 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 127
Query: 169 DMSLKLWDMSTYQCLKTMQGHDH-------NVTGVAFLPNSDFVLSAS-RDKTIKMWEVA 220
++ + D+ + + D T + A + T ++
Sbjct: 128 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE 187
Query: 221 TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECV 280
+ + S L + L++ + K T
Sbjct: 188 VFHP-----EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER 242
Query: 281 AWAPGVASESISEAAGRPPGQG------GGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
A G + A + + + + D +G L
Sbjct: 243 A--DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK-FEMG 299
Query: 335 NWVRGVTFHPGGKYL--VSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH 385
+ + + K L DKTL + D + ++++ H +
Sbjct: 300 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTA 352
Score = 83.3 bits (204), Expect = 2e-18
Identities = 33/312 (10%), Positives = 72/312 (23%), Gaps = 33/312 (10%)
Query: 122 ASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSA----------DMS 171
A + + D E G + G + + G + S
Sbjct: 22 AHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 172 LKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS---------DFVLSASRDKTIKMWEVATG 222
++++D T ++ D V P S + + ++
Sbjct: 80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 139
Query: 223 YCVKTLTGHREW-------VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+ L + DG+L + T+ E +
Sbjct: 140 AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKV-AFGTEGTPEITHTEVFHPEDEFLIN 198
Query: 276 TVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI-GHD 334
A + + + + G T G + + H
Sbjct: 199 HPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHR 258
Query: 335 NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR--AHPYVV 392
R + + V D + E H + S++ +
Sbjct: 259 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPLLYA 317
Query: 393 TGSVDKTVKVWE 404
+ DKT+ + +
Sbjct: 318 LSTGDKTLYIHD 329
Score = 77.1 bits (188), Expect = 3e-16
Identities = 33/292 (11%), Positives = 76/292 (26%), Gaps = 52/292 (17%)
Query: 85 AKRSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL 144
PT I L G + + L S + + D E ++R L
Sbjct: 86 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 145
Query: 145 HGH-------LDSVQDIAFDQSGK-LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGV 196
+ G V+ + + ++ + + +
Sbjct: 146 DVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP-----EDEFLINHP 200
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATG--YCVKTLTGHREWV----------RQIKVSPDG 244
A+ + ++ + I ++++G + + E +Q+
Sbjct: 201 AYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL 260
Query: 245 TLL----------ASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEA 294
+ + V T E A+ H ++ + +
Sbjct: 261 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQD--------- 310
Query: 295 AGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGG 346
A + DKT+ + D SG L ++ + + +T G
Sbjct: 311 -------EKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 64.8 bits (156), Expect = 4e-12
Identities = 29/239 (12%), Positives = 61/239 (25%), Gaps = 39/239 (16%)
Query: 190 DHNVTGVAFLPNSDFVL-----SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG 244
D A P++ V + + + G + + G ++ V+ DG
Sbjct: 1 DEPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDG 58
Query: 245 TLLASCSN----------DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEA 294
+ +A S V+ T A++ D V P + S +
Sbjct: 59 SFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLT---- 114
Query: 295 AGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW-------VRGVTFHPGGK 347
G S + + D+ + L D + G
Sbjct: 115 -----PDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGS 169
Query: 348 YL-VSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWEC 405
V+ G + T + T + + + +V + + +
Sbjct: 170 LAKVAFGTEGTPEITHTE-----VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDL 223
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 95.0 bits (234), Expect = 1e-22
Identities = 37/300 (12%), Positives = 75/300 (25%), Gaps = 8/300 (2%)
Query: 106 RSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVS 165
R + + P + C+ ++ + H SG S
Sbjct: 17 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCAS 75
Query: 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV 225
++++WD + + P D + + + E +
Sbjct: 76 GDVHGNVRIWDTTQTTHILKTTIPVF------SGPVKDISWDSESKRIAAVGEGRERFGH 129
Query: 226 KTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG 285
L + R+ S + T A G +
Sbjct: 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 189
Query: 286 VASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPG 345
S+ G + + H V G+T+ P
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 249
Query: 346 GKYLVSCGDDKTLRVWDTANKRNMKTLEAHS-HFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
G + S DKT+++W+ A + KT+ + L +V+ S + +
Sbjct: 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
Score = 85.0 bits (208), Expect = 4e-19
Identities = 40/267 (14%), Positives = 82/267 (30%), Gaps = 17/267 (6%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEY-----ERALHGHLDSVQDIAF 156
+ H P AS +R+WD + G + + +
Sbjct: 54 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE 113
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ + + + ++S S D T+ +
Sbjct: 114 SKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAI 173
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
+E T H ++V ++ +PDG+L AS D T +++
Sbjct: 174 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233
Query: 277 VECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTL-IGHDN 335
+ + + S G +A+ S DKTIK+W+V + + T+ +G
Sbjct: 234 NVAHSGSVFGLTWSPD-----------GTKIASASADKTIKIWNVATLKVEKTIPVGTRI 282
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWD 362
+ + + LVS + + +
Sbjct: 283 EDQQLGIIWTKQALVSISANGFINFVN 309
Score = 59.5 bits (142), Expect = 2e-10
Identities = 39/250 (15%), Positives = 69/250 (27%), Gaps = 37/250 (14%)
Query: 193 VTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN 252
+ P D + + ++ V + + T H K SP G AS
Sbjct: 20 AVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
Query: 253 DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR 312
R+W + + + S+ I+ G TG+
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 138
Query: 313 DKTIKLWDVGSGSLLFTLIGHD-----------------------------NWVRGVTFH 343
+ + S+ F +V V ++
Sbjct: 139 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYN 198
Query: 344 PGGKYLVSCGDDKTLRVWDTANKRNMKT-------LEAHSHFVTSLDFHRAHPYVVTGSV 396
P G S G D T+ +++ + AHS V L + + + S
Sbjct: 199 PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 258
Query: 397 DKTVKVWECR 406
DKT+K+W
Sbjct: 259 DKTIKIWNVA 268
Score = 58.0 bits (138), Expect = 5e-10
Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Query: 87 RSPTEWIPRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHG 146
T+ + H V + + P + +AS S D TI++W+ T + E+ +
Sbjct: 219 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPV 278
Query: 147 HLD-SVQDIAFDQSGKLLVSCSADMSLKLWDM 177
Q + + + LVS SA+ + +
Sbjct: 279 GTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
Score = 30.3 bits (66), Expect = 0.45
Identities = 5/34 (14%), Positives = 12/34 (35%), Gaps = 2/34 (5%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYE 136
+ + +I+ + S S + I + E
Sbjct: 280 TRIEDQQLGIIWTK--QALVSISANGFINFVNPE 311
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 93.5 bits (230), Expect = 4e-22
Identities = 39/287 (13%), Positives = 78/287 (27%), Gaps = 36/287 (12%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
+SGH + + +P+ S S D I W + H + + + ++ +
Sbjct: 9 ISGHNKGITALTVNPL----ISGSYDGRIMEWSSSSMH-----QDHSNLIVSLDNSKAQE 59
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVAT 221
D + +N A L N D +L + V
Sbjct: 60 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119
Query: 222 GYCVKT---------LTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
+ Q+ D + A+ ++ ++ +
Sbjct: 120 NSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAA 179
Query: 273 ----------------HDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTI 316
+ + A G + +ATGS D I
Sbjct: 180 GDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 239
Query: 317 KLWDVGS-GSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
++ V ++ L H + V + + LVS G D ++ W+
Sbjct: 240 FIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWN 285
Score = 56.1 bits (133), Expect = 2e-09
Identities = 28/251 (11%), Positives = 59/251 (23%), Gaps = 34/251 (13%)
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+ LKT+ GH+ +T + P ++S S D I W ++ + H + +
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ-----DHSNLIVSLDN 54
Query: 241 SPDGTLLASCSNDHTARVWS--------------------LATKETKAELRGHDHTVECV 280
S + +D L T + +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114
Query: 281 AWAPGVASESISEAAGRPPGQGGGPYLAT-----GSRDKTIKLWDVGSGSLLFTLIGHDN 335
+ S + G + + L + I
Sbjct: 115 KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSE 174
Query: 336 WVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGS 395
G L + + + + + V TGS
Sbjct: 175 TYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS 234
Query: 396 VDKTVKVWECR 406
+D + ++ +
Sbjct: 235 LDTNIFIYSVK 245
Score = 55.4 bits (131), Expect = 3e-09
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 9/84 (10%)
Query: 322 GSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTS 381
G +L T+ GH+ + +T +P L+S D + W ++ + HS+ + S
Sbjct: 1 GHDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS-----SMHQDHSNLIVS 51
Query: 382 LDFHRAHPYVVTGSVDKTVKVWEC 405
LD +A Y D
Sbjct: 52 LDNSKAQEYSSISWDDTLKVNGIT 75
Score = 52.3 bits (123), Expect = 3e-08
Identities = 18/159 (11%), Positives = 41/159 (25%), Gaps = 31/159 (19%)
Query: 175 WDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234
+ ++ P+ ++ + I ++++ + + R
Sbjct: 147 KLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTS 206
Query: 235 VRQIK-----------VSPDGTLLASCSNDHTARVWSLATKETKAE-LRGHDHTVECVAW 282
+ L+A+ S D ++S+ + L H V + W
Sbjct: 207 KINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLW 266
Query: 283 APGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDV 321
L + D IK W+V
Sbjct: 267 ETP-------------------STLVSSGADACIKRWNV 286
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 91.9 bits (226), Expect = 2e-21
Identities = 33/311 (10%), Positives = 84/311 (27%), Gaps = 9/311 (2%)
Query: 103 SGHRSPVIKVIFHPVFSLMASCSEDAT-IRLWDYETGEYE--RALHGHL-DSVQDIAF-- 156
S R+ + + P + +A + +R D + GH V + F
Sbjct: 14 STQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSP 73
Query: 157 DQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKM 216
+ + L S + +W + + +++ + + V P SD + +
Sbjct: 74 IKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 133
Query: 217 WEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHT 276
E + V + ++ R ++ + +G
Sbjct: 134 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 193
Query: 277 VECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNW 336
+ + P + + + +
Sbjct: 194 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG 253
Query: 337 VRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLD---FHRAHPYVVT 393
+ + G D T+RVWD + ++ + + + +++
Sbjct: 254 GIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIIS 313
Query: 394 GSVDKTVKVWE 404
S+D T+ +E
Sbjct: 314 LSLDGTLNFYE 324
Score = 67.6 bits (163), Expect = 4e-13
Identities = 37/298 (12%), Positives = 75/298 (25%), Gaps = 78/298 (26%)
Query: 87 RSPTEWIPRAPEKFALSGHRSPVIKVI-FHPVFS--LMASCSEDATIRLWDYETGEYERA 143
R + + P +GH S V+ + F P+ + S E + +W + + +
Sbjct: 43 RCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS 102
Query: 144 LH--------GHLDSVQDIAFDQSGKLLVSCSA--DMSLKLWDMSTYQCLKTMQGHDHNV 193
+ + DI++D G+ L D + L + GH +
Sbjct: 103 VEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRI 162
Query: 194 TGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT----GHREWVRQIKVSP------- 242
+ D ++ + +VR ++ SP
Sbjct: 163 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVI 222
Query: 243 ---------------------------------------DGTLLASCSNDHTARVWSLAT 263
D A+ D T RVW + T
Sbjct: 223 TVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT 282
Query: 264 KETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDV 321
+ + + G + + S D T+ +++
Sbjct: 283 SKCVQKWTLDKQQLGNQQVGVVAT---------------GNGRIISLSLDGTLNFYEL 325
Score = 64.6 bits (155), Expect = 4e-12
Identities = 33/276 (11%), Positives = 64/276 (23%), Gaps = 34/276 (12%)
Query: 151 VQDIAFDQSGKLLVSCSAD-MSLKLWD--MSTYQCLKTMQGHDHN-VTGVAFLPNSD--F 204
+++D + + ++ D S + GH + VT V F P +
Sbjct: 20 TTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQY 79
Query: 205 VLSASRDKTIKMWEVATGYCVKTL--------TGHREWVRQIKVSPDGTLLASCSN--DH 254
+ S + +W ++ + I +G L D+
Sbjct: 80 LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDN 139
Query: 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK 314
S + + E+ GH + S++
Sbjct: 140 FGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVF------------- 186
Query: 315 TIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEA 374
+ + T ++VR V F P V
Sbjct: 187 -YQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 245
Query: 375 HSHFVTSLDFHRAHP----YVVTGSVDKTVKVWECR 406
T D T++VW+
Sbjct: 246 DDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 90.6 bits (224), Expect = 2e-20
Identities = 35/266 (13%), Positives = 74/266 (27%), Gaps = 14/266 (5%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
+ Q +D V+ + L D STY+ + + V + ++
Sbjct: 18 EDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYL 76
Query: 206 LSASRDKTIKMWEVATG-----YCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARVW 259
RD + M ++ +K + R + +A +
Sbjct: 77 FVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIM 136
Query: 260 SLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLW 319
T E K T + + P +I + RP ++ I L
Sbjct: 137 DGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP------EFIVNVKETGKILLV 190
Query: 320 DVGSGSLL-FTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
D + L T I + ++ +Y ++ + + V + + +E
Sbjct: 191 DYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ 250
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVWE 404
+ G V T + +
Sbjct: 251 TPHPGRGANFVHPTFGPVWATSHMGD 276
Score = 74.8 bits (183), Expect = 3e-15
Identities = 31/345 (8%), Positives = 63/345 (18%), Gaps = 55/345 (15%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYE-----RALHGHLDSVQDIAFDQSGKLL-VS 165
+ D + + D E + K
Sbjct: 67 SRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAG 126
Query: 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD------------FVLSASRDKT 213
+ D T + K + P F+++
Sbjct: 127 AYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 186
Query: 214 IKMWEVATGYCVKTLT-GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRG 272
I + + +KT ++ + + +N V + +
Sbjct: 187 ILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 246
Query: 273 HDHTVECVAWAPGVA-SESISEAAGRPPGQGGGPYLATGSRDKTIKLWDV-----GSGSL 326
A G + T W + G
Sbjct: 247 TGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGG 306
Query: 327 LFTLIGHDNWVRGVT--------------FHPGGKYLVSCGDDKTLRVWDTANKRNMKTL 372
+ H N K + G D + A +
Sbjct: 307 SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIA---EWAGI 363
Query: 373 EAHSHFVTSLDFHRAHPYVVTGSV-------------DKTVKVWE 404
V +F++ V DKT+++
Sbjct: 364 TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 408
Score = 57.9 bits (139), Expect = 7e-10
Identities = 34/322 (10%), Positives = 76/322 (23%), Gaps = 58/322 (18%)
Query: 101 ALSGHRSPVIKVIFHPVFS-LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQS 159
S RS + +A + D ET E ++ + + +
Sbjct: 103 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPE 162
Query: 160 GK------------LLVSCSADMSLKLWDMSTYQCLK-TMQGHDHNVTGVAFLPNSDFVL 206
+ +V+ + L D + LK T + + + + +
Sbjct: 163 PRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFI 222
Query: 207 SASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-------------------TLL 247
+A+ + + + + + L+
Sbjct: 223 TAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALI 282
Query: 248 ASCSNDHTARVWSLATK-----ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQG 302
+ H W + ++ H ++ A IS + +
Sbjct: 283 GTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIK- 341
Query: 303 GGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYL-VSCG-------- 353
+ D K + + + V F+ G + S
Sbjct: 342 ---AMTGDGSDPEFKTLPIAEWA---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESA 395
Query: 354 ----DDKTLRVWDTANKRNMKT 371
DDKTL + + T
Sbjct: 396 LVVVDDKTLELKHVIKDERLVT 417
Score = 52.9 bits (126), Expect = 3e-08
Identities = 24/233 (10%), Positives = 50/233 (21%), Gaps = 18/233 (7%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
+ + + A+ + +
Sbjct: 212 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWAT 271
Query: 172 LKLWD---MSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
+ D + + + + + + ++ AT L
Sbjct: 272 SHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDAT------L 325
Query: 229 TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288
E + V D + +D + +A A + V +
Sbjct: 326 NPEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEW---AGITEGQPRVVQGEFNKDGTE 381
Query: 289 ESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVT 341
S G+ DKT++L V L T G N +T
Sbjct: 382 VWFSVWNGKDQESALVVV-----DDKTLELKHVIKDERLVTPTGKFNVYNTMT 429
Score = 38.6 bits (89), Expect = 0.001
Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 25/144 (17%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIA-FDQSG 160
+ ++ + + + L+ + L+ + +A FD
Sbjct: 289 HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYV------DATLNPEAEISGSVAVFD--I 340
Query: 161 KLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSAS----------- 209
K + +D K ++ + + V F + V +
Sbjct: 341 KAMTGDGSDPEFKTLPIAEWAGIT---EGQPRVVQGEFNKDGTEVWFSVWNGKDQESALV 397
Query: 210 --RDKTIKMWEVATGYCVKTLTGH 231
DKT+++ V + T TG
Sbjct: 398 VVDDKTLELKHVIKDERLVTPTGK 421
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 86.6 bits (212), Expect = 1e-19
Identities = 38/290 (13%), Positives = 69/290 (23%), Gaps = 30/290 (10%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERAL-HGHLDSVQDIAFDQSG 160
GH + + + S + I WD TG R H + I G
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 67
Query: 161 KLLVSCSADMSLKLWDMSTYQ---CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMW 217
L + S D LK+ G+A + D ++A
Sbjct: 68 DL-FTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS 126
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLL-----------------------ASCSNDH 254
+ + K A ++
Sbjct: 127 HGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 186
Query: 255 TARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDK 314
+ + ++ A + + LATGS D
Sbjct: 187 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN 246
Query: 315 TIKLWDVGSGSL--LFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWD 362
++ +W++ S + H +VS G D ++ W+
Sbjct: 247 SVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
Score = 85.4 bits (209), Expect = 3e-19
Identities = 37/294 (12%), Positives = 79/294 (26%), Gaps = 28/294 (9%)
Query: 138 GEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTM-QGHDHNVTGV 196
G ++ +GH ++ ++ GK L S A+ + WD+ST + H +TG+
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 197 AFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTA 256
D + D + +G ++ + + ++ + + +
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTI 316
K T+ + + V VA G
Sbjct: 122 IAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAE 181
Query: 317 KLWDVGSGSLLFTLIGHDNWVRGVTFH-------------------------PGGKYLVS 351
S + F + + P L +
Sbjct: 182 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLAT 241
Query: 352 CGDDKTLRVWD--TANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
D ++ VW+ + + AH+ + +V+ D +K W
Sbjct: 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 55.0 bits (130), Expect = 5e-09
Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 2/89 (2%)
Query: 175 WDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLT--GHR 232
+ + H V V++ P++ + + S D ++ +W + + H
Sbjct: 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHA 268
Query: 233 EWVRQIKVSPDGTLLASCSNDHTARVWSL 261
+ + T + S D + W++
Sbjct: 269 MSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 53.1 bits (125), Expect = 2e-08
Identities = 12/67 (17%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 114 FHPVFSLMASCSEDATIRLWDYETGEYER--ALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
+ P +A+ S D ++ +W+ H S + + +VS D +
Sbjct: 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSN 291
Query: 172 LKLWDMS 178
+K W++
Sbjct: 292 IKFWNVP 298
Score = 48.1 bits (112), Expect = 7e-07
Identities = 21/109 (19%), Positives = 34/109 (31%), Gaps = 22/109 (20%)
Query: 216 MWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDH 275
+ + T H V + SPD LA+ S D++ VW++ + H
Sbjct: 208 VANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH 267
Query: 276 T---VECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDV 321
V V W + + +D IK W+V
Sbjct: 268 AMSSVNSVIWLNE-------------------TTIVSAGQDSNIKFWNV 297
Score = 36.1 bits (81), Expect = 0.006
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 94 PRAPEKFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWD 134
P H + + + + S +D+ I+ W+
Sbjct: 256 PSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 86.6 bits (213), Expect = 1e-19
Identities = 24/254 (9%), Positives = 54/254 (21%), Gaps = 45/254 (17%)
Query: 174 LWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA----------SRDKTIKMWEVATGY 223
++D + L + G G A P+ + A +R +++ + T
Sbjct: 2 VYDADAKKLLGQIDGG--FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLD 59
Query: 224 CVKTLTGHREWVRQIK---VSPDGT---LLASCSNDHTARVWSLATKETKAELRGHDHTV 277
+ + + + + L + A V + K T
Sbjct: 60 HAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKML--SEIDTA 117
Query: 278 ECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRD-KTIKLWDVGSGSLL---FTLIGH 333
CV P G K + + +G +
Sbjct: 118 ACVLAYP-----------------AGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFI 160
Query: 334 DNWVRGVTFHPG--GKYLVSCGDDKTLRVWDTANK--RNMKTLEAHSHFVTSLDFHRAHP 389
D + + +R D + K + + +
Sbjct: 161 DVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGM 220
Query: 390 YVVTGSVDKTVKVW 403
+
Sbjct: 221 QQTAVQAKQNRYYV 234
Score = 83.1 bits (204), Expect = 2e-18
Identities = 31/325 (9%), Positives = 65/325 (20%), Gaps = 77/325 (23%)
Query: 131 RLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSC----------SADMSLKLWDMSTY 180
++D + + + G A K V + +++ D +T
Sbjct: 1 YVYDADAKKLLGQIDGG--FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTL 58
Query: 181 QCLKTMQGHDHNVT---GVAFLPNSD---FVLSASRDKTIKMWEVATGYCVKTLTGHRE- 233
+ + S + A+ + + + E
Sbjct: 59 DHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAV----SKKMLSEI 114
Query: 234 -WVRQIKVSPDGT--LLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASES 290
+ P G A C + V A + E +
Sbjct: 115 DTAACVLAYPAGDDRFTALCESGKALTVTLDANGK---EAKRTMSDAFIDVDKDPAFV-- 169
Query: 291 ISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG--SLLFTLIGHDNWVRGVTFH----- 343
A R G + ++ D + + R +
Sbjct: 170 ---NASRYKGD-----YLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQ 221
Query: 344 -------------------------PGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHF 378
PG + V K ++ ++ L
Sbjct: 222 QTAVQAKQNRYYVLMHKGTDGSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLV---SI 278
Query: 379 VTSLDFHRAHPYVVTGSVDKTVKVW 403
S D + + V V
Sbjct: 279 QVSEDDKPL--FYGLTATSDLV-VM 300
Score = 48.1 bits (113), Expect = 1e-06
Identities = 9/132 (6%), Positives = 24/132 (18%), Gaps = 22/132 (16%)
Query: 102 LSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK 161
S + P + +H D D +
Sbjct: 203 WSLLTDAERAEGWRPGGMQQTAVQAKQNRYYV---------LMHKGTDGSHK---DPGTQ 250
Query: 162 LLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVL--SASRDKTIKMWEV 219
+ V Q ++ + + + + + + + +
Sbjct: 251 VWVYDLKSKQRVARWDLAQQKVEP-------LVSIQVSEDDKPLFYGLTATSDLV-VMDA 302
Query: 220 ATGYCVKTLTGH 231
TG
Sbjct: 303 RTGALQHVEKQI 314
Score = 41.5 bits (96), Expect = 1e-04
Identities = 5/83 (6%), Positives = 19/83 (22%), Gaps = 10/83 (12%)
Query: 116 PVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK--LLVSCSADMSLK 173
P + + + ++ + I + K + +
Sbjct: 247 PGTQVWVYDLKSKQRVARWDLAQQK-------VEPLVSIQVSEDDKPLFYGLTATSDLV- 298
Query: 174 LWDMSTYQCLKTMQGHDHNVTGV 196
+ D T + + + +
Sbjct: 299 VMDARTGALQHVEKQIGNTSSLL 321
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 78.8 bits (192), Expect = 5e-17
Identities = 39/296 (13%), Positives = 80/296 (27%), Gaps = 38/296 (12%)
Query: 123 SCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGK-LLVSCSADMSLKLWDMSTYQ 181
+ SE I + D + + + + G + V+ + + + D +T
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 182 CLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVS 241
+ T+ ++ T+ + + + T + + +S
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGT-VKTGKSPLGLALS 124
Query: 242 PDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPG---------------- 285
PDG L +N + + + +A P
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184
Query: 286 -----------VASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHD 334
V E+ P T+ + D G+ + +
Sbjct: 185 IDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG- 243
Query: 335 NWVRGVTFHPGGKYL-VSCGDDKTLRVWDTANKRNMKTLE------AHSHFVTSLD 383
G+ P GK + V+ T+ V DTA T+ A F+ S+
Sbjct: 244 PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSIP 299
Score = 55.3 bits (131), Expect = 3e-09
Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 2/83 (2%)
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYL-VSCGDDKTLRVWDTANKR 367
S I + DV S + T+ N G P G + V+ + + DTA
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 368 NMKTLEAHSHFVTSLDFHRAHPY 390
+ T+ A S
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQV 88
Score = 39.9 bits (91), Expect = 4e-04
Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Query: 350 VSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYV-VTGSVDKTVKVW 403
++ + + V D + + T+ S+ V V + V +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSII 59
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 75.0 bits (183), Expect = 2e-15
Identities = 36/327 (11%), Positives = 74/327 (22%), Gaps = 35/327 (10%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYE-----RALHGHLDSVQDIAFDQSGK-LLVS 165
+ DA I + D E + + +
Sbjct: 67 SRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAG 126
Query: 166 CSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSD-FVLSASRDKTIKMWEVATGYC 224
+ D T + + + V + P + AS + + V
Sbjct: 127 AYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
V + + LA D + R + A + A
Sbjct: 187 VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 246
Query: 285 GVASESISEAAGRPPGQGGGPYLATGSRDKTI-------KLWDVGSGSLLFTLIGHDNWV 337
+ A + G + + D +I K + + L G
Sbjct: 247 VGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS 306
Query: 338 RGVTFHPGGKYLV-------SCGDDKTLRVWDTAN---------KRNMKTLEAHSHFVTS 381
+ HP +L +++ V+D N L + V
Sbjct: 307 LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ 366
Query: 382 LDFHRAHPYVV-----TGSVDKTVKVW 403
++++ V + + V
Sbjct: 367 PEYNKRGDEVWFSVWNGKNDSSALVVV 393
Score = 74.2 bits (181), Expect = 4e-15
Identities = 33/243 (13%), Positives = 71/243 (29%), Gaps = 13/243 (5%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
D V+ + L D + + +K + V + ++L RD
Sbjct: 26 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDAR 84
Query: 214 IKMWEVATGYC-----VKTLTGHREWVRQIKVSPDGT-LLASCSNDHTARVWSLATKETK 267
I M ++ +K R + +A + T E K
Sbjct: 85 IDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPK 144
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLL 327
+ TV+ + P +I + P + K + + +L
Sbjct: 145 QIVSTRGMTVDTQTYHPEPRVAAIIASHEHP-----EFIVNVKETGKVLLVNYKDIDNLT 199
Query: 328 FTLIGHDNWVRGVTFHPGGKY-LVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR 386
T IG ++ + +Y + + + + V D+ ++R ++ +
Sbjct: 200 VTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 259
Query: 387 AHP 389
HP
Sbjct: 260 VHP 262
Score = 71.1 bits (173), Expect = 4e-14
Identities = 35/306 (11%), Positives = 87/306 (28%), Gaps = 24/306 (7%)
Query: 120 LMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMST 179
+ + I L D ++ + + + +V SG+ L+ D + + D+
Sbjct: 34 FSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWA 92
Query: 180 YQC-----LKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREW 234
+ +K + + ++ + K + R
Sbjct: 93 KEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGM 152
Query: 235 VRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEA 294
+ +A+ H + + KET L + ++ + A+ +++
Sbjct: 153 TVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADG 212
Query: 295 AGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTF---HPGGKYLVS 351
+ A S + S L + + RG F G + S
Sbjct: 213 GWDSSHRYFMTA-ANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTS 271
Query: 352 CGDDKTLRVWDTANKRN-------MKTLEAHSHFVTSLDFHRAHPYVV-------TGSVD 397
D ++ + T K + + L+ + H ++ +
Sbjct: 272 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARIS 331
Query: 398 KTVKVW 403
++V V+
Sbjct: 332 QSVAVF 337
Score = 66.5 bits (161), Expect = 1e-12
Identities = 22/218 (10%), Positives = 51/218 (23%), Gaps = 26/218 (11%)
Query: 194 TGVAFLPNSD--FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCS 251
+ F ++ I + + + VK + V ++S G L
Sbjct: 22 KKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIG 80
Query: 252 NDHTARVWSLATKETKAELR-----GHDHTVECVAWAPGVASESISEAAGRPPGQGGGPY 306
D + L KE
Sbjct: 81 RDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGY-----------------EDRYT 123
Query: 307 LATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGK-YLVSCGDDKTLRVWDTAN 365
+A + D + + V T+HP + + + + +
Sbjct: 124 IAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 183
Query: 366 KRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVW 403
+ + ++ A P++ G D + + +
Sbjct: 184 TGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYF 221
Score = 54.2 bits (129), Expect = 1e-08
Identities = 16/181 (8%), Positives = 38/181 (20%), Gaps = 26/181 (14%)
Query: 230 GHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASE 289
R + + + + + +K+ + V +
Sbjct: 18 EDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSA----- 71
Query: 290 SISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTL-----IGHDNWVRGVTFHP 344
G YL RD I + D+ + I +
Sbjct: 72 -------------SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGY 118
Query: 345 GGKYL-VSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFH-RAHPYVVTGSVDKTVKV 402
+Y + D + + V + +H + S + +
Sbjct: 119 EDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 178
Query: 403 W 403
Sbjct: 179 V 179
Score = 43.8 bits (102), Expect = 2e-05
Identities = 36/275 (13%), Positives = 69/275 (25%), Gaps = 45/275 (16%)
Query: 101 ALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEY-ERALHGHLDSVQDIAFDQS 159
+ H + + E + L +Y+ + G + D +D S
Sbjct: 158 TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSS 217
Query: 160 GKL-LVSCSADMSLKLWDMSTYQCLKTMQGHDHN---------------VTGVAFLPNSD 203
+ + + + + + D + + V + L +
Sbjct: 218 HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGS 277
Query: 204 FVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-------TLLASCSNDHTA 256
L + K + V L G IK P T +
Sbjct: 278 ISLIGTDPKNHPQY---AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSV 334
Query: 257 RVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSR---- 312
V+ L + K ++ + A V ++ G + + +
Sbjct: 335 AVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR-------GDEVWFSVWNGKNDS 387
Query: 313 -------DKTIKLWDVGSGSLLFTLIGHDNWVRGV 340
DKT+KL V L T G N
Sbjct: 388 SALVVVDDKTLKLKAVVKDPRLITPTGKFNVYNTQ 422
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 63.7 bits (153), Expect = 7e-12
Identities = 32/296 (10%), Positives = 65/296 (21%), Gaps = 56/296 (18%)
Query: 123 SCSEDATIRLWDY-ETGEYE-RALHGHLDSVQDIAFDQSGKLL-VSCSADMSLKLWDMST 179
+ E I +W+ G + VQ + + L V + + + ++
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 180 YQCLKTMQGHDH---NVTGVAFLPNSDFVLSASRDKTIKM---WEVATGYCVKTLTGHRE 233
T ++T ++ FV S + E V + +
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD 128
Query: 234 WVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISE 293
+SPD L + + + + P +E
Sbjct: 129 GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 188
Query: 294 AAGRPPGQGGG-------------------------------------------PYLATG 310
+ A
Sbjct: 189 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 248
Query: 311 SRDKTIKLWDVGSGSLLFTLIGHD---NWVRGVTFHPGGKYL-VSCGDDKTLRVWD 362
I ++ V + + G RG GKYL + + V++
Sbjct: 249 RTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYE 304
Score = 52.9 bits (125), Expect = 2e-08
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 309 TGSRDKTIKLWDV-GSGSL-LFTLIGHDNWVRGVTFHPGGKYL-VSCGDDKTLRVWDTAN 365
+ I +W++ G+L L ++ V+ + P +YL V + + + A
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 366 KRNMKTLEAHSHFVTS 381
T A S S
Sbjct: 69 DDGALTFAAESALPGS 84
Score = 34.8 bits (78), Expect = 0.017
Identities = 6/57 (10%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 350 VSCGDDKTLRVWDTANKRNMKTLE--AHSHFVTSLDFHRAHPYV-VTGSVDKTVKVW 403
++ + + + VW+ ++ + + V + Y+ V + V +
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY 64
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 57.6 bits (139), Expect = 1e-09
Identities = 27/219 (12%), Positives = 57/219 (26%), Gaps = 27/219 (12%)
Query: 150 SVQDIAFDQSGKLL-VSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSA 208
++ + D +GK +C + + + A + +F
Sbjct: 177 NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNV-ERIAAAVKAGNFKTIG 235
Query: 209 SRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDG-TLLASCSNDHTARVWSLATKETK 267
K + + + + + SPDG +A+ T V ++
Sbjct: 236 D-SKVPVVDGRGESEFTRYIPVPK-NPHGLNTSPDGKYFIANGKLSPTVSVIAIDK--LD 291
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLL 327
+ + VA + G G T D + W++
Sbjct: 292 DLFEDKIELRDTI-----VAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKH 346
Query: 328 F---------------TLIGHDNWVRGVTFHPGGKYLVS 351
+ GH++ + GK+LV
Sbjct: 347 YNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVV 385
Score = 51.1 bits (122), Expect = 1e-07
Identities = 24/226 (10%), Positives = 55/226 (24%), Gaps = 20/226 (8%)
Query: 189 HDHNVTGVAFLPNSDFVLSASR-DKTIKMWEVATGYCVKTLT-GHREWVRQIKVSPDG-T 245
H H ++ + ++ + + + + K + + + +++ T
Sbjct: 71 HPH-ISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKT 129
Query: 246 LLASCSNDHTARV----WSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQ 301
C+ + + + D VAW V G
Sbjct: 130 NYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVD--------GNLDNT 181
Query: 302 GGGP---YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTL 358
Y + + + G+ + N R G + GD K
Sbjct: 182 DADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKT-IGDSKVP 240
Query: 359 RVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
V + + + ++ G + TV V
Sbjct: 241 VVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIA 286
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 50.8 bits (120), Expect = 1e-07
Identities = 31/253 (12%), Positives = 62/253 (24%), Gaps = 18/253 (7%)
Query: 151 VQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASR 210
++++A G + V+ + + + V+G+AF N D V +
Sbjct: 30 LENLASAPDGTIFVTNHEVGEIVSITPDG--NQQIHATVEGKVSGLAFTSNGDLVATGWN 87
Query: 211 DKTIKMWEVA---TGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETK 267
+I + + ++ I D L + S + +
Sbjct: 88 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGS 147
Query: 268 AELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLL 327
L A G T D
Sbjct: 148 IWLEHPMLARSNSESV-------FPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGE 200
Query: 328 FTLIGHDNWVRGVTFHP-GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHR 386
+ + F G Y + + +R+ + + E T++ F +
Sbjct: 201 PEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQ 260
Query: 387 AHP-----YVVTG 394
YVVT
Sbjct: 261 TEGDCTAIYVVTN 273
Score = 39.6 bits (91), Expect = 4e-04
Identities = 10/84 (11%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Query: 320 DVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFV 379
++ ++ + + ++ + P G V+ + + + + V
Sbjct: 14 ELAPAKIITSF-PVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ--QIHATVEGKV 70
Query: 380 TSLDFHRAHPYVVTGSVDKTVKVW 403
+ L F V TG ++ V
Sbjct: 71 SGLAFTSNGDLVATGWNADSIPVV 94
Score = 35.4 bits (80), Expect = 0.009
Identities = 17/181 (9%), Positives = 48/181 (26%), Gaps = 18/181 (9%)
Query: 218 EVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTV 277
E+A + + + ++ + +PDGT+ + + S+ + + V
Sbjct: 14 ELAPAKIITSFPVNT-FLENLASAPDGTIFVTNHEVG--EIVSITPDGNQQIHATVEGKV 70
Query: 278 ECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWV 337
+A+ + + L + ++
Sbjct: 71 SGLAFTSNGDLVATG---------------WNADSIPVVSLVKSDGTVETLLTLPDAIFL 115
Query: 338 RGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVD 397
G+T +YL + + + D LE ++ + + +
Sbjct: 116 NGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGN 175
Query: 398 K 398
Sbjct: 176 F 176
Score = 35.4 bits (80), Expect = 0.010
Identities = 31/252 (12%), Positives = 63/252 (25%), Gaps = 17/252 (6%)
Query: 112 VIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMS 171
+ P ++ + E I G + V +AF +G L+ + S
Sbjct: 33 LASAPDGTIFVTNHEVGEIVSIT-PDGNQQI-HATVEGKVSGLAFTSNGDLVATGWNADS 90
Query: 172 L---KLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTL 228
+ L + G+ L ++ ++ + S I + +V L
Sbjct: 91 IPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWL 150
Query: 229 TGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVAS 288
+ + +N L T+ L
Sbjct: 151 EHPMLAR------SNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIF 204
Query: 289 ESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKY 348
+ G Y AT + +++ S +++ V F
Sbjct: 205 VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTE-- 262
Query: 349 LVSCGDDKTLRV 360
GD + V
Sbjct: 263 ----GDCTAIYV 270
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 50.9 bits (120), Expect = 2e-07
Identities = 31/289 (10%), Positives = 73/289 (25%), Gaps = 24/289 (8%)
Query: 99 KFALSGHRSPVIKVIFHPVFSLMASCSEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ 158
+++ S + + + + + ++ +
Sbjct: 199 EYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIG 258
Query: 159 SGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWE 218
L D++ + + Q L+ +Q + D+ S+ R + +
Sbjct: 259 DHYL-----CDVTWATQERISLQWLRRIQNYSVMDI-------CDYDESSGRWNCLVARQ 306
Query: 219 VATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVE 278
+ R + + + + + +
Sbjct: 307 HIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTW-- 364
Query: 279 CVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLL-FTLIGHDNWV 337
V + S+ + + G GG L I+L D + L L
Sbjct: 365 EVIGIEALTSDYLYYISNEYKGMPGGRNLYK------IQLSDYTKVTCLSCELNPERCQY 418
Query: 338 RGVTFHPGGKYLV-SCGDDKT--LRVWDTANKRNMKTLEAHSHFVTSLD 383
V+F KY C + + N + ++ LE +S L
Sbjct: 419 YSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQ 467
Score = 40.9 bits (94), Expect = 2e-04
Identities = 36/294 (12%), Positives = 75/294 (25%), Gaps = 30/294 (10%)
Query: 126 EDATIRLWDYETGEYERALHGH-----LDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTY 180
++ I +++ E G L S+ D + G+ ++ +K W S
Sbjct: 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFIL--LEYNYVKQWRHSYT 91
Query: 181 QCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKV 240
+ + +PN+ ++ S + VK +
Sbjct: 92 ASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTG 151
Query: 241 SPD--------GTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVA-WAPGVASESI 291
D + ++A WS A + +D V + S
Sbjct: 152 KEDIIYNGITDWVYEEEVFSAYSALWWS-PNGTFLAYAQFNDTEVPLIEYSFYSDESLQY 210
Query: 292 SEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVS 351
+ P P + + + S S + + G YL
Sbjct: 211 PKTVRVPY-----PKAGAVNPTVKFFVVNTDSLSSVTNATSIQ-ITAPASMLIGDHYLCD 264
Query: 352 CG--DDKTLRVWDTANKRNMKTL-----EAHSHFVTSLDFHRAHPYVVTGSVDK 398
+ + + +N + + S L + TG V +
Sbjct: 265 VTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGR 318
Score = 26.6 bits (57), Expect = 7.1
Identities = 19/229 (8%), Positives = 60/229 (26%), Gaps = 15/229 (6%)
Query: 184 KTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCV-----KTLTGHREWVRQI 238
T + +++ ++ + +++ ++ I ++ G T +
Sbjct: 13 NTYRLKLYSLR---WISDHEYLYK--QENNILVFNAEYGNSSVFLENSTFDEFGHSINDY 67
Query: 239 KVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP-GVASESISEAAGR 297
+SPDG + N + W + + + + P + S +
Sbjct: 68 SISPDGQFILLEYN--YVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHK 125
Query: 298 PPGQGGGP-YLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLVSCGDDK 356
Y+ + ++ G +++ I + V + G
Sbjct: 126 LAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFL 185
Query: 357 TLRVWDTANKRNMK-TLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
++ ++ + + +P + V
Sbjct: 186 AYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVN 234
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 40.0 bits (92), Expect = 3e-04
Identities = 30/260 (11%), Positives = 70/260 (26%), Gaps = 12/260 (4%)
Query: 146 GHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFV 205
G +A + ++V+ + + ++++D K G PN V
Sbjct: 20 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR--FKFQFGECGKRDSQLLYPNRVAV 77
Query: 206 LSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKE 265
+ S D + + G + + + V +
Sbjct: 78 VRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRV 137
Query: 266 TKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGS 325
+ G+ + + G +++ G
Sbjct: 138 IIFDQNGNVLHKFGCSKHLEFPN-------GVVVNDKQEIFISDNRAHCVKVFNYEGQYL 190
Query: 326 LLFTLIGHDNWVRGVTFHPGGKYLVS-CGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDF 384
G N+ GV + G+ L++ ++ L ++ + + LE+ D
Sbjct: 191 RQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-LISALESKVKHAQCFDV 249
Query: 385 HRAH-PYVVTGSVDKTVKVW 403
VV S D + ++
Sbjct: 250 ALMDDGSVVLASKDYRLYIY 269
Score = 30.0 bits (66), Expect = 0.48
Identities = 9/58 (15%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 120 LMASCSEDATIRLWDYETGEYER--ALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLW 175
L+A + + ++ + G+ D+A G ++++ S D L ++
Sbjct: 214 LIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIY 269
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 39.8 bits (91), Expect = 3e-04
Identities = 11/128 (8%), Positives = 32/128 (25%)
Query: 133 WDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHN 192
+ L+ +A D SG + V+ + + + + + +
Sbjct: 124 LAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITA 183
Query: 193 VTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSN 252
G+A ++ + + + V D T+ +
Sbjct: 184 PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG 243
Query: 253 DHTARVWS 260
+ +
Sbjct: 244 NDRVVKLT 251
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 36.0 bits (81), Expect = 0.006
Identities = 15/114 (13%), Positives = 33/114 (28%), Gaps = 5/114 (4%)
Query: 175 WDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGY-CVKTLTGHRE 233
+ + + F++ S + + +
Sbjct: 155 KVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF 214
Query: 234 WVRQIKVSPDGTLLASCSNDHTA---RVWSLATKETKAELRGHDHTVECVAWAP 284
++P+GT++ S+ + S + KA L D V+ AW+P
Sbjct: 215 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-KARLPATDGQVKFPAWSP 267
Score = 31.8 bits (70), Expect = 0.12
Identities = 27/259 (10%), Positives = 63/259 (24%), Gaps = 18/259 (6%)
Query: 130 IRLWDYETGEYERALHGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGH 189
+R+ DY G + +H + A+ G L + + +
Sbjct: 21 LRVSDY-DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVI--------QTLA 71
Query: 190 DHNVTGVAFLPNSDFVLSASRD-KTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLA 248
+ V VA P + + S D + TG + +
Sbjct: 72 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTE 131
Query: 249 SCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLA 308
+ + + + + ++ + S++ +
Sbjct: 132 PTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKF----MVM 187
Query: 309 TGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV---SCGDDKTLRVWDTAN 365
S + + ++ + P G ++ S G L + +
Sbjct: 188 VSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVS-TD 246
Query: 366 KRNMKTLEAHSHFVTSLDF 384
R L A V +
Sbjct: 247 GRFKARLPATDGQVKFPAW 265
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 33.8 bits (76), Expect = 0.036
Identities = 31/278 (11%), Positives = 67/278 (24%), Gaps = 33/278 (11%)
Query: 125 SEDATIRLWDYETGEYERALHGHLDSVQDIAFDQ----SGKLLVS--------CSADMSL 172
+ T+RLW+ ET + G + L S S
Sbjct: 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY 93
Query: 173 KLWDMST--YQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTG 230
L + Q L + + + + P ++ + V +
Sbjct: 94 VLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQ--AIRVVS 151
Query: 231 HREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAPGVASES 290
+ D H A WS +D V + +
Sbjct: 152 TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA-AINDSRVPIMEL------PT 204
Query: 291 ISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLI------GHDNWVRGVTFHP 344
+ + P + + ++ + + + ++ + ++ V +
Sbjct: 205 YTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT 264
Query: 345 GGKYLVSC----GDDKTLRVWDTANKRNMKTLEAHSHF 378
K V+ + L + D K E S
Sbjct: 265 STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEA 302
Score = 33.8 bits (76), Expect = 0.040
Identities = 9/71 (12%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Query: 316 IKLWDVGSGSLLFTLIGHDNWVRGVTFHPGGKYLV---SCGDDKTLRVWDTANKRNMKTL 372
+ L + + +F + + + V +T +K+ M L
Sbjct: 391 ANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDL 450
Query: 373 EAHSHFVTSLD 383
E + H +++
Sbjct: 451 ETNEHVKKAIN 461
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 33.2 bits (74), Expect = 0.042
Identities = 13/181 (7%), Positives = 39/181 (21%), Gaps = 3/181 (1%)
Query: 225 VKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGHDHTVECVAWAP 284
+ + + + + PDG +A ++ +
Sbjct: 33 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNT---ADLYFYNGENGEIKRITYFSGK 89
Query: 285 GVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGHDNWVRGVTFHP 344
++ AG P ++ + + + + F
Sbjct: 90 STGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFAD 149
Query: 345 GGKYLVSCGDDKTLRVWDTANKRNMKTLEAHSHFVTSLDFHRAHPYVVTGSVDKTVKVWE 404
G + + + R +E +S + H + + +
Sbjct: 150 GRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITD 209
Query: 405 C 405
Sbjct: 210 I 210
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 31.6 bits (70), Expect = 0.16
Identities = 25/253 (9%), Positives = 53/253 (20%), Gaps = 11/253 (4%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDFVLSASRDKT 213
+ FD+ G+L + + ++ + T + + H N + + + D
Sbjct: 45 LNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFK 104
Query: 214 IKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATKETKAELRGH 273
A L E + D + + +
Sbjct: 105 STGGIFAATENGDNLQDIIEDLSTAYCIDDMV--FDSKGGFYFTDFRGYSTNPLGGVYYV 162
Query: 274 DHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSGSLLFTLIGH 333
V S + A + D + I +
Sbjct: 163 SPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPY 222
Query: 334 D----NWVRGVTFHPGGKYLVSCGDDKTLRVWDTANKRNMK-----TLEAHSHFVTSLDF 384
V+ + V++ + E H T F
Sbjct: 223 YFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQF 282
Query: 385 HRAHPYVVTGSVD 397
++ S D
Sbjct: 283 IPGTNQLIICSND 295
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing
enzyme {Neurospora crassa [TaxId: 5141]}
Length = 365
Score = 29.4 bits (65), Expect = 0.73
Identities = 29/274 (10%), Positives = 59/274 (21%), Gaps = 52/274 (18%)
Query: 145 HGHLDSVQDIAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNSDF 204
+V F + S + KL Q + + G+ F P +
Sbjct: 103 KQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQN---YEYQENTG-IHGMVFDPTETY 158
Query: 205 VLSASRDKTIKMWEVATGYCVKTLTGHREWVRQIKVSPDGTLLASCSNDHTARVWSLATK 264
+ SA + K +G E V + G + T
Sbjct: 159 LYSAD------LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM- 211
Query: 265 ETKAELRGHDHTVECVAWAPGVASESISEAAGRPPGQGGGPYLATGSRDKTIKLWDVGSG 324
+ + P + L G
Sbjct: 212 -------EAGNRICEYVIDPA--------------------THMPVYTHHSFPLIPPGIP 244
Query: 325 SLLFTLIGHDNWVRGVTFHPGGK--YLVSCGDD----KTLRVWDTANKRNMKTLEAHSHF 378
GK + S + + + + +++ S
Sbjct: 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT 304
Query: 379 VTSLDFHRA---HPY-----VVTGSVDKTVKVWE 404
TS A P+ +T + ++++
Sbjct: 305 PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYR 338
>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal
domain {Paracoccus denitrificans [TaxId: 266]}
Length = 459
Score = 29.0 bits (65), Expect = 1.2
Identities = 36/250 (14%), Positives = 64/250 (25%), Gaps = 46/250 (18%)
Query: 128 ATIRLWDYETGEYER--ALHGHLDSVQDIAFDQSGKLLVSCS--ADMSLKLWDMSTYQCL 183
D + E + G+LD + D GK S S ++ + L +M+
Sbjct: 173 NVFTAVDADKWEVAWQVLVSGNLD---NCDADYEGKWAFSTSYNSEKGMTLPEMTA---- 225
Query: 184 KTMQGHDHNVTG-----VAFLPNSDFVLSASRDKTIKMWEVATGYCVKTLTGHREWVRQI 238
DH V + D+ + K + + A+ + +
Sbjct: 226 ---AEMDHIVVFNIAEIEKAIAAGDYQEL-NGVKVVDGRKEASSLFTRYIPIAN-NPHGC 280
Query: 239 KVSPDGTLLASCSN-DHTARVWSLATKETKAELRGHDHTVECVAWAPGVASESISEAAGR 297
++PD L T V + + + V +E
Sbjct: 281 NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA--------VVAEPELGLGPL 332
Query: 298 PPGQGGGPYLATGSR-DKTIKLWDVGSGSLLFT---------------LIGHDNWVRGVT 341
G T D + W++ + GH V G T
Sbjct: 333 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGET 392
Query: 342 FHPGGKYLVS 351
+LV
Sbjct: 393 LDATNDWLVC 402
>d2j2ja1 b.21.1.1 (A:361-542) Adenovirus fiber protein "knob" domain
{Canine adenovirus 2 [TaxId: 10514]}
Length = 182
Score = 26.3 bits (58), Expect = 4.6
Identities = 9/49 (18%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ FDQ G+L+ + + + + W + H +PN
Sbjct: 62 MEFDQFGQLMSTGNINSTT-TWGEKPWGNNTVQPRPSHT--WKLCMPNR 107
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 125
Score = 25.5 bits (56), Expect = 6.1
Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 3/21 (14%)
Query: 7 QREELNKAV---ADYLLSNGY 24
Q E K V ADYL+ Y
Sbjct: 105 QAGEATKIVEQLADYLIGVQY 125
>d1dmua_ c.52.1.4 (A:) Restriction endonuclease BglI {Bacillus
subtilis [TaxId: 1423]}
Length = 299
Score = 26.5 bits (58), Expect = 6.2
Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 82 PTRAKRSPTEWIPRAPEKFALS-GHRSPVIKVIFHPVFSLMASCSED 127
+ RS ++P P + LS G +PV+ + P++++ + D
Sbjct: 181 TIQGPRSSQIFLPTIPPLYILSDGTIAPVVHLFIKPIYAMRSLTKGD 227
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 25.1 bits (55), Expect = 7.1
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 29 EGFKKDADLPAEVEKKYSGLLEKKW---TSVIRLQKKVIELESKLSEAEKEYVEGA 81
+ +DA+ AE ++K+ L++ + + +K+V E KL +K +E A
Sbjct: 7 QKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIESA 62
>d1qhva_ b.21.1.1 (A:) Adenovirus fiber protein "knob" domain {Human
adenovirus type 2 [TaxId: 10515]}
Length = 195
Score = 26.0 bits (57), Expect = 8.0
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 6/49 (12%)
Query: 154 IAFDQSGKLLVSCSADMSLKLWDMSTYQCLKTMQGHDHNVTGVAFLPNS 202
+ FDQ+G L+ + S W+ + + + V F+PN
Sbjct: 72 LRFDQNGVLMENSSLKKH--YWNFRNGN---STNANPYT-NAVGFMPNL 114
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 272
Score = 25.9 bits (56), Expect = 9.0
Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 15 VADYLLSNGYLSALEGFKKDADLPAEVEKKYSGLLEKKWTSVIRLQKKVIELESKLSEAE 74
VADYL SN + L A + +++++ L + + + L +
Sbjct: 183 VADYLRSNDSVPQLR-----ARISEMIQQRFDTELAPEVVTFTK-----ARLSDGVLGVR 232
Query: 75 KEYVEGA 81
EY+ A
Sbjct: 233 AEYLAAA 239
>d1acfa_ d.110.1.1 (A:) Profilin (actin-binding protein)
{Acanthamoeba castellanii [TaxId: 5755]}
Length = 125
Score = 25.1 bits (55), Expect = 9.2
Identities = 7/21 (33%), Positives = 9/21 (42%), Gaps = 3/21 (14%)
Query: 7 QREELNKAV---ADYLLSNGY 24
Q V ADYL+ G+
Sbjct: 105 QPGTAANVVEKLADYLIGQGF 125
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.131 0.406
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,533,860
Number of extensions: 69502
Number of successful extensions: 896
Number of sequences better than 10.0: 1
Number of HSP's gapped: 410
Number of HSP's successfully gapped: 180
Length of query: 406
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 319
Effective length of database: 1,213,086
Effective search space: 386974434
Effective search space used: 386974434
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.2 bits)