Query psy2261
Match_columns 857
No_of_seqs 313 out of 1531
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 20:13:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2261.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2261hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1g8m_A Aicar transformylase-IM 100.0 4E-214 1E-218 1775.2 52.5 587 5-857 4-593 (593)
2 3zzm_A Bifunctional purine bio 100.0 5E-189 2E-193 1557.8 44.7 493 3-857 7-523 (523)
3 4ehi_A Bifunctional purine bio 100.0 4E-189 2E-193 1559.0 38.9 496 5-857 23-534 (534)
4 1zcz_A Bifunctional purine bio 100.0 5E-177 2E-181 1438.9 41.3 450 5-857 12-464 (464)
5 1g8m_A Aicar transformylase-IM 100.0 2.2E-37 7.5E-42 348.3 4.5 166 325-491 324-532 (593)
6 4ggi_A UDP-2,3-diacylglucosami 99.9 5.6E-31 1.9E-35 276.7 -16.8 245 491-851 27-278 (283)
7 4ehi_A Bifunctional purine bio 99.9 2.7E-26 9.2E-31 256.4 3.6 100 325-424 327-469 (534)
8 3zzm_A Bifunctional purine bio 99.9 1.3E-25 4.4E-30 250.8 7.7 97 325-421 321-458 (523)
9 1zcz_A Bifunctional purine bio 99.9 2E-25 6.7E-30 245.4 8.3 97 325-423 272-401 (464)
10 2yvq_A Carbamoyl-phosphate syn 99.2 1.7E-11 5.8E-16 117.2 6.5 114 6-158 25-140 (143)
11 1vmd_A MGS, methylglyoxal synt 98.8 4.5E-09 1.5E-13 104.9 6.9 116 5-160 26-146 (178)
12 1a9x_A Carbamoyl phosphate syn 98.7 8.3E-09 2.8E-13 125.3 6.6 112 6-162 942-1056(1073)
13 2xw6_A MGS, methylglyoxal synt 98.7 2.2E-08 7.5E-13 96.0 7.1 117 6-162 3-124 (134)
14 1b93_A Protein (methylglyoxal 98.7 3.8E-09 1.3E-13 103.1 1.9 115 6-160 11-130 (152)
15 4ggi_A UDP-2,3-diacylglucosami 98.5 2.9E-09 9.8E-14 112.2 -5.3 116 308-423 48-204 (283)
16 3lab_A Putative KDPG (2-keto-3 66.5 2.9 0.0001 43.0 2.9 44 798-845 64-107 (217)
17 4e38_A Keto-hydroxyglutarate-a 65.9 3.3 0.00011 42.9 3.1 48 797-848 84-131 (232)
18 3ff4_A Uncharacterized protein 54.9 11 0.00039 34.9 4.4 37 810-848 72-109 (122)
19 2q5c_A NTRC family transcripti 49.0 15 0.00052 36.4 4.5 43 15-59 37-81 (196)
20 2ioj_A Hypothetical protein AF 47.9 7.8 0.00027 36.0 2.1 41 815-855 68-109 (139)
21 1vhc_A Putative KHG/KDPG aldol 43.6 17 0.00057 37.1 3.9 50 796-849 66-115 (224)
22 1cyd_A Carbonyl reductase; sho 40.8 65 0.0022 31.1 7.5 120 6-153 7-140 (244)
23 1wbh_A KHG/KDPG aldolase; lyas 39.1 15 0.0005 37.1 2.7 48 798-849 67-114 (214)
24 3rd5_A Mypaa.01249.C; ssgcid, 37.6 1.3E+02 0.0045 30.3 9.4 126 5-153 15-143 (291)
25 1iuk_A Hypothetical protein TT 36.5 29 0.001 32.4 4.1 38 810-849 84-122 (140)
26 3ppi_A 3-hydroxyacyl-COA dehyd 36.4 99 0.0034 30.9 8.3 40 6-45 30-69 (281)
27 3g40_A Na-K-CL cotransporter; 35.8 43 0.0015 36.1 5.6 74 337-413 81-160 (294)
28 3uce_A Dehydrogenase; rossmann 34.4 50 0.0017 31.9 5.5 114 1-152 1-120 (223)
29 3l8h_A Putative haloacid dehal 34.0 84 0.0029 28.7 6.8 24 16-39 29-53 (179)
30 1mxs_A KDPG aldolase; 2-keto-3 33.7 20 0.00067 36.5 2.6 49 797-849 76-124 (225)
31 2yw3_A 4-hydroxy-2-oxoglutarat 32.7 30 0.001 34.5 3.7 49 797-849 61-109 (207)
32 3f9i_A 3-oxoacyl-[acyl-carrier 32.3 92 0.0031 30.4 7.1 126 5-153 13-147 (249)
33 2iya_A OLEI, oleandomycin glyc 32.0 41 0.0014 35.4 4.8 49 7-55 13-67 (424)
34 2d59_A Hypothetical protein PH 31.0 47 0.0016 31.0 4.5 37 810-848 91-128 (144)
35 3l2b_A Probable manganase-depe 28.9 36 0.0012 33.4 3.5 53 799-855 123-175 (245)
36 1fob_A Beta-1,4-galactanase; B 27.6 79 0.0027 33.6 6.1 90 15-108 58-217 (334)
37 2pq6_A UDP-glucuronosyl/UDP-gl 27.3 54 0.0018 36.0 4.9 88 15-106 21-127 (482)
38 1xpj_A Hypothetical protein; s 27.3 29 0.001 31.4 2.3 39 809-847 29-80 (126)
39 2isb_A Fumarase, FUM-1; NP_069 26.1 56 0.0019 33.3 4.3 36 814-851 104-140 (192)
40 4gmk_A Ribose-5-phosphate isom 25.5 23 0.00078 36.8 1.4 38 623-669 3-40 (228)
41 4gmk_A Ribose-5-phosphate isom 25.1 49 0.0017 34.3 3.7 33 682-722 9-41 (228)
42 3ezl_A Acetoacetyl-COA reducta 24.5 2.6E+02 0.009 27.2 8.8 33 5-37 12-44 (256)
43 4es6_A Uroporphyrinogen-III sy 24.4 1.2E+02 0.0041 30.2 6.5 122 15-161 66-205 (254)
44 1wa3_A 2-keto-3-deoxy-6-phosph 24.2 59 0.002 31.4 4.0 35 812-849 75-109 (205)
45 3fok_A Uncharacterized protein 24.1 2.2E+02 0.0077 30.7 8.7 111 693-849 41-181 (307)
46 2duw_A Putative COA-binding pr 24.0 80 0.0027 29.5 4.7 36 811-848 85-121 (145)
47 3p9z_A Uroporphyrinogen III co 23.9 1E+02 0.0034 30.6 5.7 108 30-160 67-180 (229)
48 3r6d_A NAD-dependent epimerase 23.5 2E+02 0.0068 27.3 7.6 103 7-153 6-112 (221)
49 1y81_A Conserved hypothetical 22.9 74 0.0025 29.6 4.3 36 811-848 84-120 (138)
50 3h7a_A Short chain dehydrogena 22.9 1.5E+02 0.005 29.5 6.7 34 6-39 7-40 (252)
51 2pju_A Propionate catabolism o 22.8 66 0.0022 32.8 4.2 129 17-162 49-190 (225)
52 3ixq_A Ribose-5-phosphate isom 22.6 45 0.0016 34.5 2.9 32 683-722 9-40 (226)
53 3d3w_A L-xylulose reductase; u 21.9 1.8E+02 0.0063 27.9 7.1 39 6-44 7-45 (244)
54 1wcw_A Uroporphyrinogen III sy 21.3 1.3E+02 0.0046 29.8 6.1 120 16-160 68-202 (261)
55 3eag_A UDP-N-acetylmuramate:L- 20.9 89 0.003 32.7 4.9 49 3-51 1-54 (326)
56 3fq8_A Glutamate-1-semialdehyd 20.8 77 0.0026 33.4 4.4 43 807-849 181-238 (427)
57 1knx_A Probable HPR(Ser) kinas 20.3 76 0.0026 34.1 4.2 45 811-855 74-118 (312)
58 2w4l_A DCMP deaminse, deoxycyt 20.2 1.2E+02 0.004 29.9 5.3 17 696-712 36-52 (178)
59 2fpr_A Histidine biosynthesis 20.1 1.6E+02 0.0054 27.6 6.0 37 16-52 44-100 (176)
No 1
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=100.00 E-value=3.8e-214 Score=1775.25 Aligned_cols=587 Identities=63% Similarity=1.001 Sum_probs=546.6
Q ss_pred CccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCCCCh
Q psy2261 5 NGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSRNTD 84 (857)
Q Consensus 5 ~~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar~~~ 84 (857)
.+|+|||||+||++++++|+.|.++||+|+||+||+++|+++||+|+.|+|+||||||||||||||||+||||||+|+++
T Consensus 4 ~~G~aLISV~DK~~iv~lAk~L~~lGf~I~ATgGTAk~L~e~GI~v~~V~k~TgfPE~l~GRVKTLHP~ihgGiLar~~~ 83 (593)
T 1g8m_A 4 RQQLALLSVSEKAGLVEFARSLNALGLGLIASGGTATALRDAGLPVRDVSDLTGFPEMLGGRVKTLHPAVHAGILARNIP 83 (593)
T ss_dssp CCCEEEEEESCCTTHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCEEHHHHHSCCCBGGGTBSSCSHHHHHHHHCCSSH
T ss_pred CCCEEEEEEeCcHhHHHHHHHHHHCCCEEEEchHHHHHHHHCCCeEEEeecccCCchhhcCCccccCchhhhhhccCCCH
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999997789
Q ss_pred hhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHHHcCC
Q psy2261 85 SDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDIEASP 164 (857)
Q Consensus 85 ~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el~~~~ 164 (857)
+|+++|++|||+||||||||||||++||+++|++++|+|||||||||||||||||||++|+|||||+||+.|+++|+.
T Consensus 84 ~h~~~l~~~~I~~iDlVvvNLYPF~~tva~~~~~~~e~iEnIDIGGptmlRaAAKN~~~V~Vv~dp~dY~~vl~el~~-- 161 (593)
T 1g8m_A 84 EDNADMNKQDFSLVRVVVCNLYPFVKTVSSPGVTVPEAVEKIDIGGVALLRAAAKNHARVTVVCDPADYSSVAKEMAA-- 161 (593)
T ss_dssp HHHHHHHHTTCCCEEEEEEECCCHHHHHTSTTCCHHHHHTTCCSHHHHHHHHHHHTTTTCEEECCGGGHHHHHHHHHT--
T ss_pred HHHHHHHHcCCCceeEEEEeccCHHHhhccCCCCHHHHHhhCCCCcHHHHHHHHhCCCCEEEECCHHHHHHHHHHHHh--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCC---CHHHHHHHHHHHHHHhhhhhHHHHhhhhhccCCcccccccccCCCCCCcccccccccCccchhhhcCCCCCCC
Q psy2261 165 TKET---SEEIRKKLALKAFTHTSDYDTNIVDYFRKQYSPNEAQISLRYGMNPHQSPAQIFTTLDKLPIKVLNGQPGFIN 241 (857)
Q Consensus 165 ~G~~---s~~~R~~LA~kAF~~tA~YD~aIa~yl~~~~~~~~~~~~LRYGENPHQ~~AalY~~~~~~~~~~L~Gk~SyNN 241 (857)
|.+ |+++|++||.|||+|||+||++|++||.+++....+.+.|||||||||+||++|...+.++++|||||+||||
T Consensus 162 -g~~~~~s~~~R~~LA~kAF~~Ta~YD~aIa~y~~~~~~~~~~~~~LRYGeNPHQk~Aa~Y~~~g~~~~~~L~Gk~sYnN 240 (593)
T 1g8m_A 162 -SKDKDTSVETRRHLALKAFTHTAQYDAAISDYFRKEYSKGVSQLPLRYGMNPHQSPAQLYTTRPKLPLTVVNGSPGFIN 240 (593)
T ss_dssp -STTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBTTTEEEESCSSSTTSCCEEEECSSSSCSEEEEESCCCHHH
T ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCCCccchhheecccccCcEEecCCCCcch
Confidence 556 9999999999999999999999999998765444788999999999997799998777789999999999999
Q ss_pred hhhhHHHHHHHHHHHhhcCCCcEEEeccCCcceeeeccCCChhhhhhhhhcccccCCchHHHHHHHHHcCCCccCCCCEE
Q psy2261 242 LLDALNGWQLVKELKTALNLPAAASFKHCSPAGAAVFRRLTDPEIKAAMVEDLEDGMSELAVAYARARGADRMSSFGDFI 321 (857)
Q Consensus 242 ilDadaA~~lv~e~~~~~~~paavivKH~nPcG~A~~~~l~~~~~~~~~~~~~~~~~~~l~~Ay~~A~~~Dp~SAFGgII 321 (857)
|+|+|+||++|+||+.+++.|||+||||+||||+|+|.||+|.+.+.+||+|+.+..+++++||+|||+|||+|||||||
T Consensus 241 l~Dad~A~~lv~ef~~a~~~Paaai~KH~nPcG~Avg~pl~~~~~~~~~v~~~~~~ls~la~Ay~rA~~aDp~SaFGgii 320 (593)
T 1g8m_A 241 LCDALNAWQLVKELKQALGIPAAASFKHVSPAGAAVGIPLSEEEAQVCMVHDLHKTLTPLASAYARSRGADRMSSFGDFI 320 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHCSCEEEEEETTEEEEEEECCCCCHHHHHHTTCTTTGGGCCHHHHHHHHHHHSCTTTTTTEEE
T ss_pred hhhhHHHHHHHHHHHhhcCCCcEEEeecCCcceEEeccccchhhhhhcccccccccccHHHHHHHHHHcCCcccccCCEE
Confidence 99999999999999988999999999999999999999999999999999875333345555555555555555555555
Q ss_pred ecCCccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecCchhcccchhHHHHhhhccccceEEEeeCCeEE
Q psy2261 322 ALSDECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILELPEFAIRDLTVATIALKYTQSNSVVYAKNGQVI 401 (857)
Q Consensus 322 a~n~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~~~~~~~dl~~a~~~~~~~ksn~v~~~k~~~~v 401 (857)
T Consensus 321 -------------------------------------------------------------------------------- 320 (593)
T 1g8m_A 321 -------------------------------------------------------------------------------- 320 (593)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccCCccchhhhhhhccccchhhhhcCCCccchhhhhhhhhhccccccccccccccCCCCCccccccccCCCCCCCCCh
Q psy2261 402 GIGAGQQSRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFDGPPPEPMTE 481 (857)
Q Consensus 402 giG~Gq~~Rv~~~~lA~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (857)
T Consensus 321 -------------------------------------------------------------------------------- 320 (593)
T 1g8m_A 321 -------------------------------------------------------------------------------- 320 (593)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhhhcccchhhhhhhhhhhhhhHHHHHHHHHhcCCcccccCceeeeccccCHHHHHHhccceEEEEEcCCCChh
Q psy2261 482 KEKADFIYTLHGVSIKAAMVEDLEDGMSELAVAYARARGADRMSSFGDFIALSDECDTSTAEVIGREVSDGIICPGITLG 561 (857)
Q Consensus 482 ~~~~~~~~~kh~npcg~a~~~~~~~~~~~~~eAy~kA~~~DpvSAFGgiIA~Nr~vD~~tA~~i~~~f~EvIIAP~fe~e 561 (857)
|+||+||.+||++|+++|+||||||+|+||
T Consensus 321 --------------------------------------------------A~n~~vD~~tA~~i~~~f~EvVIAP~y~~e 350 (593)
T 1g8m_A 321 --------------------------------------------------ALSDICDVPTAKIISREVSDGVVAPGYEEE 350 (593)
T ss_dssp --------------------------------------------------EESSCBCHHHHHHHHTSCEEEEEESCBCHH
T ss_pred --------------------------------------------------EEcCccCHHHHHHHhhhEEEEEEcCCCCHH
Confidence 999999999999999999999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCCCCCCCceEEEEeeeEEEeecCCCCCCcccccccccccCCCCHHHHHhhHHHHHHhhhcc
Q psy2261 562 AREILEKKKGGKYVILEVDPNYTPSPIERRQVFGLTLEQKRNNFNVTPELFTNIVSEEKWLPEFAIRDLTVATIALKYTQ 641 (857)
Q Consensus 562 ALeiL~~KKnlR~~iL~~~~~~~~~~~e~r~v~Gg~L~Q~~d~~~~~~~~~~~vvT~~~~~~~~~~~dl~fa~~v~k~~k 641 (857)
|||||++|||+||+||++++.+.++.+|+|+|+||+|+|+||...+++++|+++||+++.||++++
T Consensus 351 AleiL~~KKn~r~~vL~~~~~~~~~~~e~r~v~Gg~L~Q~rd~~~~~~~~~~~vVT~~~~pt~~e~-------------- 416 (593)
T 1g8m_A 351 ALKILSKKKNGGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKNIVTKNKTLPESAV-------------- 416 (593)
T ss_dssp HHHHHHHGGGGTCEEEEECTTCCCCSEEEEEETTEEEEEECCCCCCSGGGGCCBCSSSCCCCHHHH--------------
T ss_pred HHHHHHhCcCcceEEEEECCCCCCCCeeEEEECcEEEEECCCCCCCCHHHHHHhccCCCCcCHHHH--------------
Confidence 999999999999999999877777789999999999999999988888888789999744575554
Q ss_pred ccchhhcccCceecccCCccccchhccccCCCCchhhhhhhHHHHHHhhccccceEEEeeCCeEEeecCCCCchhHHHHH
Q psy2261 642 SNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKLPEFAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRL 721 (857)
Q Consensus 642 snaiv~ak~~~~vgigaGQ~sRv~~~r~a~~~~~~~~~~DLl~a~~~~k~vkSNsIv~akdg~tvGIGaGQ~sRV~~~ri 721 (857)
+||+|||+++||||||||||+|||||||||+||||||||+||
T Consensus 417 --------------------------------------~DL~fAw~v~K~vkSNaIv~akdg~tvGiGaGQ~sRV~~~rl 458 (593)
T 1g8m_A 417 --------------------------------------RDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRL 458 (593)
T ss_dssp --------------------------------------HHHHHHHHHHHTSCSSCEEEEETTEEEEEECSCSCHHHHHHH
T ss_pred --------------------------------------HHHHHHHHHHHhcCcceEEEEECCeEEEECCCCCchHHHHHH
Confidence 555555555666777788999999999999999999999999
Q ss_pred HHHhhhhhhhhhcCCcccccccccccccccchhhhhhccCCcCCCCchhhhhcccCCCCCCCCCHHHHHhhhhccCceEE
Q psy2261 722 AGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFDGPPPEPMTEKEKADFIYTLHGVSV 801 (857)
Q Consensus 722 A~~KA~~~~lr~h~~v~~~~f~~~~~r~e~~n~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~er~~~~~~l~G~Vl 801 (857)
|++||++||||+||+|++++|+.+++|++|+|+||+|+.|+..++.+...|+++|+ +.|+++|++||++|+..++|+||
T Consensus 459 A~~KA~~w~lr~~~~v~~~~~~~~~~r~~~~n~id~~~~~~~~~~~~~~~~~~~f~-~~p~~~t~~ek~~w~~~~~G~vl 537 (593)
T 1g8m_A 459 AGDKANSWWLRHHPRVLSMKFKAGVKRAEVSNAIDQYVTGTIGEDEDLVKWQAMFE-EVPAQLTEAEKKQWIAKLTAVSL 537 (593)
T ss_dssp HHHHHHHHHHTTCHHHHTCEECTTCCHHHHHHHHHHHHHTCSCSTHHHHHHHTTEE-ECCCCCCHHHHHHHHTTCCCEEE
T ss_pred HHHHhhhhhhhcchhhhcccccchhhhhhhhcchhhhcccccccchhhhhhhhhhc-cccccccHHHHHhhhcccCceEE
Confidence 99999999999999999999999999999999999999998888888999999998 78999999999999999999999
Q ss_pred eccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcCCCCCCC
Q psy2261 802 ASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHNTRLFHH 857 (857)
Q Consensus 802 aSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG~RhFrH 857 (857)
+|||||||+|+||+|+++||+|||||||||||+|||++||||||+|||||+|||||
T Consensus 538 aSDAFFPF~D~v~~A~~aGV~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 593 (593)
T 1g8m_A 538 SSDAFFPFRDNVDRAKRIGVQFIVAPSGSAADEVVIEACNELGITLIHTNLRLFHH 593 (593)
T ss_dssp EESSCCSSTHHHHHHHTTTEEEEEEECCCTTHHHHHHHHHHHTCEEEEESCCCCCC
T ss_pred EeccccCCchhHHHHHHhCCeEEECCCCCcCCHHHHHHHHHcCCeEEECCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999
No 2
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=100.00 E-value=4.9e-189 Score=1557.80 Aligned_cols=493 Identities=34% Similarity=0.542 Sum_probs=452.1
Q ss_pred CCCccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCCC
Q psy2261 3 KNNGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSRN 82 (857)
Q Consensus 3 ~~~~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar~ 82 (857)
..++++|||||+||++++++|+.|.++||+|+||+||+++|+++||+|+.|+|+||||||||||||||||+||||||+|+
T Consensus 7 ~~~i~~aLISVsDK~glvelAk~L~~lGfeI~ATgGTak~L~e~GI~v~~V~~vTgfPEil~GRVKTLHP~ihgGiLa~r 86 (523)
T 3zzm_A 7 RRPIRRALISVYDKTGLVDLAQGLSAAGVEIISTGSTAKTIADTGIPVTPVEQLTGFPEVLDGRVKTLHPRVHAGLLADL 86 (523)
T ss_dssp CCCCCEEEEEESSCTTHHHHHHHHHHTTCEEEECHHHHHHHHTTTCCCEEHHHHHSCCCCTTTTSSSCSHHHHHHHHCCT
T ss_pred cccccEEEEEEeccccHHHHHHHHHHCCCEEEEcchHHHHHHHcCCceeeccccCCCchhhCCccccCCchhhhhhccCC
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999965
Q ss_pred -ChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHHH
Q psy2261 83 -TDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDIE 161 (857)
Q Consensus 83 -~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el~ 161 (857)
+++|+++|++|||+||||||||||||++||++ |++++|+|||||||||||||||||||++|+|||||+||+.++++|+
T Consensus 87 ~~~~h~~~l~~~~i~~iDlVvvNLYPF~~tv~~-~~~~~~~iE~IDIGGpsmlRaAAKN~~~V~vv~dp~dY~~vl~~l~ 165 (523)
T 3zzm_A 87 RKSEHAAALEQLGIEAFELVVVNLYPFSQTVES-GASVDDCVEQIDIGGPAMVRAAAKNHPSAAVVTDPLGYHGVLAALR 165 (523)
T ss_dssp TSHHHHHHHHHHTCCCCSEEEEECCCHHHHHHT-TCCHHHHHHTCCSHHHHHHHHHHHTTTTCEEECCGGGHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCceeEEEEeCCChHHHHhc-CCCHHHHHHhcccCcHHHHHHHHhcCCCEEEECCHHHHHHHHHHHH
Confidence 79999999999999999999999999999998 9999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhhhhHHHHhhhhhcc---------CC-----cccccccccCCCCCCccccccccc--
Q psy2261 162 ASPTKETSEEIRKKLALKAFTHTSDYDTNIVDYFRKQY---------SP-----NEAQISLRYGMNPHQSPAQIFTTL-- 225 (857)
Q Consensus 162 ~~~~G~~s~~~R~~LA~kAF~~tA~YD~aIa~yl~~~~---------~~-----~~~~~~LRYGENPHQ~~AalY~~~-- 225 (857)
+ |++|+++|++||.|||+|||+||++|++||.+++ +. .++.+.|||||||||+ |++|...
T Consensus 166 ~---g~~~~~~R~~lA~kAF~~ta~YD~aIa~yl~~~~~~~~~~~~~p~~~~~~~~~~~~LRYGENPHQ~-aa~Y~~~~~ 241 (523)
T 3zzm_A 166 A---GGFTLAERKRLASLAFQHIAEYDIAVASWMQQTLAPEHPVAAFPQWFGRSWRRVAMLRYGENPHQQ-AALYGDPTA 241 (523)
T ss_dssp T---TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCCSSCSEEEEEEEEEEECSCSSSTTSC-EEEEECTTS
T ss_pred c---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchheeeccccccccCCCCCcccc-hhhhccCCc
Confidence 3 8999999999999999999999999999997643 22 3788999999999998 6799764
Q ss_pred --CccchhhhcCCC-CCCChhhhHHHHHHHHHHHhhcCCCcEEEeccCCcceeee-ccCCChhhhhhhhhcccccCCchH
Q psy2261 226 --DKLPIKVLNGQP-GFINLLDALNGWQLVKELKTALNLPAAASFKHCSPAGAAV-FRRLTDPEIKAAMVEDLEDGMSEL 301 (857)
Q Consensus 226 --~~~~~~~L~Gk~-SyNNilDadaA~~lv~e~~~~~~~paavivKH~nPcG~A~-~~~l~~~~~~~~~~~~~~~~~~~l 301 (857)
+..+++|||||+ |||||+|+|+||++|+||+ +||||||||+||||+|+ | .++
T Consensus 242 ~~~~~~~~qL~GKeLSYnNl~DadaA~~lv~ef~----~Pa~aivKH~nPCGvA~~g--------------------~~l 297 (523)
T 3zzm_A 242 WPGLAQAEQLHGKDMSYNNFTDADAAWRAAFDHE----QTCVAIIKHANPCGIAISS--------------------VSV 297 (523)
T ss_dssp CCCGGGCEEEESSCCCHHHHHHHHHHHHHHTTSS----SEEEEEEETTEEEEEEEES--------------------SCH
T ss_pred ccCcccceeccCCCCCcccHHhHHHHHHHHHhcC----CCeEEEEecCCcceeecCC--------------------CCH
Confidence 467899999997 9999999999999999996 69999999999999999 6 367
Q ss_pred HHHHHHHHcCCCccCCCCEEecCCccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecCchhcccchhHHH
Q psy2261 302 AVAYARARGADRMSSFGDFIALSDECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILELPEFAIRDLTVAT 381 (857)
Q Consensus 302 ~~Ay~~A~~~Dp~SAFGgIIa~n~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~~~~~~~dl~~a~ 381 (857)
++||+|||+|||+|||||||
T Consensus 298 ~~Ay~~A~~~Dp~SaFGgii------------------------------------------------------------ 317 (523)
T 3zzm_A 298 ADAHRKAHECDPLSAYGGVI------------------------------------------------------------ 317 (523)
T ss_dssp HHHHHHHHTTSHHHHTTEEE------------------------------------------------------------
T ss_pred HHHHHHHHhcCCccccCCEE------------------------------------------------------------
Confidence 77777777777766666666
Q ss_pred HhhhccccceEEEeeCCeEEeeccCCccchhhhhhhccccchhhhhcCCCccchhhhhhhhhhccccccccccccccCCC
Q psy2261 382 IALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKD 461 (857)
Q Consensus 382 ~~~~~~ksn~v~~~k~~~~vgiG~Gq~~Rv~~~~lA~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (857)
T Consensus 318 -------------------------------------------------------------------------------- 317 (523)
T 3zzm_A 318 -------------------------------------------------------------------------------- 317 (523)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccCCCCCCCCChhhhhhhhhhhcccchhhhhhhhhhhhhhHHHHHHHHHhcCCcccccCceeeeccccCHHH
Q psy2261 462 MDTKTWESFFDGPPPEPMTEKEKADFIYTLHGVSIKAAMVEDLEDGMSELAVAYARARGADRMSSFGDFIALSDECDTST 541 (857)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kh~npcg~a~~~~~~~~~~~~~eAy~kA~~~DpvSAFGgiIA~Nr~vD~~t 541 (857)
|+||+||.+|
T Consensus 318 ----------------------------------------------------------------------A~N~~vD~~t 327 (523)
T 3zzm_A 318 ----------------------------------------------------------------------AANTEVSVEM 327 (523)
T ss_dssp ----------------------------------------------------------------------EESSCBCHHH
T ss_pred ----------------------------------------------------------------------EEcCccCHHH
Confidence 9999999999
Q ss_pred HHHhccceEEEEEcCCCChhHHHHHHhccCCcEEEEEeCCCCCCCCceEEEEeeeEEEeecCCCCC---Ccccccccccc
Q psy2261 542 AEVIGREVSDGIICPGITLGAREILEKKKGGKYVILEVDPNYTPSPIERRQVFGLTLEQKRNNFNV---TPELFTNIVSE 618 (857)
Q Consensus 542 A~~i~~~f~EvIIAP~fe~eALeiL~~KKnlR~~iL~~~~~~~~~~~e~r~v~Gg~L~Q~~d~~~~---~~~~~~~vvT~ 618 (857)
|++|+++|+||||||+|+|||||||++|||+| +|+++ .+.++.+++|+|.||+|+|++|...+ ++++| ++||+
T Consensus 328 A~~i~~~f~EvviAP~~~~eAleiL~~KKnlR--~l~~~-~~~~~~~e~r~v~GG~LvQ~~D~~~~~~~~~~~~-~vvT~ 403 (523)
T 3zzm_A 328 AEYVSTIFTEVIVAPGYAPGALDVLARKKNIR--VLVAA-EPLAGGSELRPISGGLLIQQSDQLDAHGDNPANW-TLATG 403 (523)
T ss_dssp HHHHTTSCEEEEEESCBCTTHHHHHTTSSSCE--EEECC-CCCSSCEEEEEETTEEEEEECCCSCSGGGSGGGC-EEEES
T ss_pred HHHHhhhEEEEEEcCCCCHHHHHHHHhCCCeE--EEEec-CCCCCCeEEEEEeeeEEEECCCCcccccCCHHHC-eeccC
Confidence 99999999999999999999999999999999 77765 35556799999999999999999887 77788 79999
Q ss_pred cCCCCHHHHHhhHHHHHHhhhccccchhhcccCceecccCCccccchhccccCCCCchhhhhhhHHHHHHhhccccceEE
Q psy2261 619 EKWLPEFAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKLPEFAIRDLTVATIALKYTQSNSVV 698 (857)
Q Consensus 619 ~~~~~~~~~~dl~fa~~v~k~~ksnaiv~ak~~~~vgigaGQ~sRv~~~r~a~~~~~~~~~~DLl~a~~~~k~vkSNsIv 698 (857)
++ ||++|++||.|||++|| ||||||||
T Consensus 404 ~~-pt~~e~~dL~fAw~v~K----------------------------------------------------~vkSNAIv 430 (523)
T 3zzm_A 404 SP-ADPATLTDLVFAWRACR----------------------------------------------------AVKSNAIV 430 (523)
T ss_dssp SC-CCHHHHHHHHHHHHHGG----------------------------------------------------GSCSSCEE
T ss_pred CC-cCHHHHHHHHHHHHHHH----------------------------------------------------hccCceEE
Confidence 87 48666666666555554 55666789
Q ss_pred EeeCCeEEeecCCCCchhHHHHHHHHhhhhhhhhhcCCcccccccccccccccchhhhhhccCCcCCCCchhhhhcccCC
Q psy2261 699 YAKNGQVIGIGAGQQSRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFDG 778 (857)
Q Consensus 699 ~akdg~tvGIGaGQ~sRV~~~riA~~KA~~~~lr~h~~v~~~~f~~~~~r~e~~n~i~~~~~~~~~~~~~~~~~~~~~~~ 778 (857)
|+|||||||||+||||||||+|+|++||+.
T Consensus 431 ~akdg~tvGiGaGQ~sRV~s~r~A~~kAg~-------------------------------------------------- 460 (523)
T 3zzm_A 431 IAADGATVGVGMGQVNRVDAARLAVERGGE-------------------------------------------------- 460 (523)
T ss_dssp EEETTEEEEEECSCSSHHHHHHHHHHHHGG--------------------------------------------------
T ss_pred EEECCeEEEECCCCcchHHHHHHHHHHhcc--------------------------------------------------
Confidence 999999999999999999999999999941
Q ss_pred CCCCCCCHHHHHhhhhccCceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcCCCCCCC
Q psy2261 779 PPPEPMTEKEKADFIYTLHGVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHNTRLFHH 857 (857)
Q Consensus 779 ~~~~~~t~~er~~~~~~l~G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG~RhFrH 857 (857)
+++|+||||||||||+|+||+|+++||+|||||||||||+|||++||||||+|||||+|||||
T Consensus 461 ----------------~~~G~vlaSDAFFPF~D~ve~aa~aGv~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 523 (523)
T 3zzm_A 461 ----------------RVRGAVAASDAFFPFPDGLETLAAAGVTAVVHPGGSVRDEEVTEAAAKAGVTLYLTGARHFAH 523 (523)
T ss_dssp ----------------GCTTCEEEESSCCSSHHHHHHHHHTTCCEEEECCCCTTHHHHHHHHHHHTCEEEECSCCCCCC
T ss_pred ----------------ccCCeEEEeccCcCCCccHHHHHHcCCEEEECCCCCCCcHHHHHHHHHcCCeEEEcCccCcCC
Confidence 267999999999999999999999999999999999999999999999999999999999999
No 3
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.4e-189 Score=1558.97 Aligned_cols=496 Identities=34% Similarity=0.556 Sum_probs=418.6
Q ss_pred CccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCCC-C
Q psy2261 5 NGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSRN-T 83 (857)
Q Consensus 5 ~~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar~-~ 83 (857)
+.+||||||+||++++++|+.|.++||+|+||+||+++|+++||+|+.|+|+||||||||||||||||+||||||+|+ +
T Consensus 23 ~i~raLISV~DK~glv~~Ak~L~~lGfeI~ATgGTak~L~e~GI~v~~V~kvTgfPEil~GRVKTLHP~IhgGiLa~r~~ 102 (534)
T 4ehi_A 23 NAMRALLSVSDKEGIVEFGKELENLGFEILSTGGTFKLLKENGIKVIEVSDFTKSPELFEGRVKTLHPKIHGGILHKRSD 102 (534)
T ss_dssp TCCEEEEEESSCTTHHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCEECBCCC---------------------------
T ss_pred CCcEEEEEEcccccHHHHHHHHHHCCCEEEEccHHHHHHHHCCCceeehhhccCCchhhCCccccCChhhhhhhccCCCC
Confidence 678999999999999999999999999999999999999999999999999999999999999999999999999965 7
Q ss_pred hhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHHHcC
Q psy2261 84 DSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDIEAS 163 (857)
Q Consensus 84 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el~~~ 163 (857)
++|+++|++|||+||||||||||||++||++ |++++|+|||||||||||||||||||++|+|||||+||+.++++|+.
T Consensus 103 ~~h~~~l~~~~I~~iDlVvvNLYPF~~tv~~-~~~~~~~iE~IDIGGpsmlRAAAKN~~~V~Vv~dp~dY~~vl~~l~~- 180 (534)
T 4ehi_A 103 ENHIKQAKENEILGIDLVCVNLYPFKKTTIM-SDDFDEIIENIDIGGPAMIRSAAKNYKDVMVLCDPLDYEKVIETLKK- 180 (534)
T ss_dssp -----------CEEESEEEEECCCHHHHHHH-CCCHHHHHHTSCSSHHHHHHHHHHTTTTCEEECCGGGHHHHHHHHHT-
T ss_pred HHHHHHHHHcCCCceeEEEEeCcChHHHHhc-CCCHHHHHHHhhcCcHHHHHHHHHcCCCEEEECCHHHHHHHHHHHHc-
Confidence 9999999999999999999999999999998 99999999999999999999999999999999999999999999984
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhhhhHHHHhhhhhc----cCC-----cccccccccCCCCCCccccccccc--Cccchhh
Q psy2261 164 PTKETSEEIRKKLALKAFTHTSDYDTNIVDYFRKQ----YSP-----NEAQISLRYGMNPHQSPAQIFTTL--DKLPIKV 232 (857)
Q Consensus 164 ~~G~~s~~~R~~LA~kAF~~tA~YD~aIa~yl~~~----~~~-----~~~~~~LRYGENPHQ~~AalY~~~--~~~~~~~ 232 (857)
|++|+++|++||.|||+|||+||++|++||+++ |+. .++.+.|||||||||+ |++|... +..+++|
T Consensus 181 --g~~~~~~R~~lA~kAF~~ta~YD~aI~~~l~~~~~~~~p~~~~~~~~~~~~LRYGENPHQ~-aA~Y~~~~~~~~~~~q 257 (534)
T 4ehi_A 181 --GQNDENFRLNLMIKAYEHTANYDAYIANYMNERFNGGFGASKFIVGQKVFDTKYGENPHQK-GALYEFDAFFSANFKA 257 (534)
T ss_dssp --TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSEEEEEEEEEEEESCSSSTTSC-EEEEESSSHHHHHCEE
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchheeecceeccccCCCCCCCcc-ceEEecCCCCcccceE
Confidence 899999999999999999999999999999753 333 3788999999999999 6799763 3578899
Q ss_pred hcCCCCCCChhhhHHHHHHHHHHHhhcCCCcEEEeccCCcceeeeccCCChhhhhhhhhcccccCCchHHHHHHHHHcCC
Q psy2261 233 LNGQPGFINLLDALNGWQLVKELKTALNLPAAASFKHCSPAGAAVFRRLTDPEIKAAMVEDLEDGMSELAVAYARARGAD 312 (857)
Q Consensus 233 L~Gk~SyNNilDadaA~~lv~e~~~~~~~paavivKH~nPcG~A~~~~l~~~~~~~~~~~~~~~~~~~l~~Ay~~A~~~D 312 (857)
|||++|||||+|+|+||++|+||+ +.||||||||+||||+|+| .++++||+|||+||
T Consensus 258 L~GelSYNNllDadaA~~lv~ef~---~~Pa~aivKH~nPCGvA~g--------------------~~l~~Ay~~A~~~D 314 (534)
T 4ehi_A 258 LKGEASFNNLTDINAALNLASSFD---KAPAIAIVKHGNPCGFAIK--------------------ENLVQSYIHALKCD 314 (534)
T ss_dssp EESCCCHHHHHHHHHHHHHHTSST---TSCEEEEEETTEEEEEEEC--------------------SSHHHHHHHHHTTC
T ss_pred eccccCccchHhHHHHHHHHHhcC---CCCEEEEEecCCcchhhcC--------------------ccHHHHHHHHHhcC
Confidence 999779999999999999999997 2599999999999999999 36777777777777
Q ss_pred CccCCCCEEecCCccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecCchhcccchhHHHHhhhccccceE
Q psy2261 313 RMSSFGDFIALSDECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILELPEFAIRDLTVATIALKYTQSNSV 392 (857)
Q Consensus 313 p~SAFGgIIa~n~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~~~~~~~dl~~a~~~~~~~ksn~v 392 (857)
|+|||||||
T Consensus 315 p~SaFGGii----------------------------------------------------------------------- 323 (534)
T 4ehi_A 315 SVSAYGGVV----------------------------------------------------------------------- 323 (534)
T ss_dssp HHHHTTCEE-----------------------------------------------------------------------
T ss_pred CccccCCEE-----------------------------------------------------------------------
Confidence 777777777
Q ss_pred EEeeCCeEEeeccCCccchhhhhhhccccchhhhhcCCCccchhhhhhhhhhccccccccccccccCCCCCccccccccC
Q psy2261 393 VYAKNGQVIGIGAGQQSRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFD 472 (857)
Q Consensus 393 ~~~k~~~~vgiG~Gq~~Rv~~~~lA~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (857)
T Consensus 324 -------------------------------------------------------------------------------- 323 (534)
T 4ehi_A 324 -------------------------------------------------------------------------------- 323 (534)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCChhhhhhhhhhhcccchhhhhhhhhhhhhhHHHHHHHHHhcCCcccccCceeeeccccCHHHHHHhccceEEE
Q psy2261 473 GPPPEPMTEKEKADFIYTLHGVSIKAAMVEDLEDGMSELAVAYARARGADRMSSFGDFIALSDECDTSTAEVIGREVSDG 552 (857)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~kh~npcg~a~~~~~~~~~~~~~eAy~kA~~~DpvSAFGgiIA~Nr~vD~~tA~~i~~~f~Ev 552 (857)
|+||+||.+||++|+++|+||
T Consensus 324 -----------------------------------------------------------A~Nr~vD~~tA~~i~~~F~Ev 344 (534)
T 4ehi_A 324 -----------------------------------------------------------AINGTLDEALANKINEIYVEV 344 (534)
T ss_dssp -----------------------------------------------------------EEEEEECHHHHHHHTTSCCSE
T ss_pred -----------------------------------------------------------EECCccCHHHHHHHhhhEEEE
Confidence 999999999999999999999
Q ss_pred EEcCCCChhHHHHHHhccCCcEEEEEeCC---CCCCCCceEEEEeeeEEEeecCCCCCCcc-cccccccccCCCCHHHHH
Q psy2261 553 IICPGITLGAREILEKKKGGKYVILEVDP---NYTPSPIERRQVFGLTLEQKRNNFNVTPE-LFTNIVSEEKWLPEFAIR 628 (857)
Q Consensus 553 IIAP~fe~eALeiL~~KKnlR~~iL~~~~---~~~~~~~e~r~v~Gg~L~Q~~d~~~~~~~-~~~~vvT~~~~~~~~~~~ 628 (857)
||||+|+|||||||++|||+| +|++++ .+.++.+++|+|.||+|+|++|...++++ +| ++||+++| |++|++
T Consensus 345 VIAP~y~~eAleiL~~KKnlR--iL~~~~~~~~~~~~~~e~r~v~GG~LvQ~~d~~~~~~~~~~-~vVT~~~p-t~~e~~ 420 (534)
T 4ehi_A 345 IIAANVDEKALAVFEGKKRIK--IFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNA-KLMSQREA-SKEELK 420 (534)
T ss_dssp EEEEEECHHHHHTTSSCSSCE--EEECSSSSCCCCCCSEEEEEETTEEEEEECCCCCTTTTTTS-EECSSBCC-CHHHHH
T ss_pred EEcCCCCHHHHHHHHhCCCce--EEEECCccccCCCCCeEEEEEeeEEEEECCCCCCCCchhcc-eeeCCCCC-CHHHHH
Confidence 999999999999999999999 677653 24456789999999999999999888877 78 79999974 866666
Q ss_pred hhHHHHHHhhhccccchhhcccCceecccCCccccchhccccCCCCchhhhhhhHHHHHHhhccccceEEEeeCCeEEee
Q psy2261 629 DLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKLPEFAIRDLTVATIALKYTQSNSVVYAKNGQVIGI 708 (857)
Q Consensus 629 dl~fa~~v~k~~ksnaiv~ak~~~~vgigaGQ~sRv~~~r~a~~~~~~~~~~DLl~a~~~~k~vkSNsIv~akdg~tvGI 708 (857)
||.|||++||| ||||||||+||||||||
T Consensus 421 DL~FAw~v~K~----------------------------------------------------vKSNAIv~akdg~tvGi 448 (534)
T 4ehi_A 421 DLEIAMKIAAF----------------------------------------------------TKSNNVVYVKNGAMVAI 448 (534)
T ss_dssp HHHHHHHHHHH----------------------------------------------------SCSSCEEEEETTEEEEE
T ss_pred HHHHHHHHHHh----------------------------------------------------cCCceEEEEeCCeEEEE
Confidence 66666555555 56667799999999999
Q ss_pred cCCCCchhHHHHHHHHhhhhhhhhhcCCcccccccccccccccchhhhhhccCCcCCCCchhhhhcccCCCCCCCCCHHH
Q psy2261 709 GAGQQSRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFDGPPPEPMTEKE 788 (857)
Q Consensus 709 GaGQ~sRV~~~riA~~KA~~~~lr~h~~v~~~~f~~~~~r~e~~n~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e 788 (857)
|+||||||||+|+|++||++| |
T Consensus 449 GaGQ~sRV~s~r~A~~kA~~~-------------------------------g--------------------------- 470 (534)
T 4ehi_A 449 GMGMTSRIDAAKAAIAKAKEM-------------------------------G--------------------------- 470 (534)
T ss_dssp ECSSSCHHHHHHHHHHHHHHT-------------------------------T---------------------------
T ss_pred CCCCcchHHHHHHHHHHHHhh-------------------------------c---------------------------
Confidence 999999999999999999864 1
Q ss_pred HHhhhhccCceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcCCCCCCC
Q psy2261 789 KADFIYTLHGVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHNTRLFHH 857 (857)
Q Consensus 789 r~~~~~~l~G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG~RhFrH 857 (857)
.+++|+||||||||||+|+||+|+++||+|||||||||||+|||++||||||+|||||+|||||
T Consensus 471 -----~~~~G~vlASDAFFPF~D~ve~Aa~aGV~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 534 (534)
T 4ehi_A 471 -----LDLQGCVLASEAFFPFRDSIDEASKVGVKAIVEPGGSIRDDEVVKAADEYGMALYFTGVRHFLH 534 (534)
T ss_dssp -----CCCTTCEEECSSCCCSTHHHHHHHHTTCCEEEECCCCTTHHHHHHHHHHHTCEEEECSCCCCCC
T ss_pred -----cCCCCeEEEeccccCCCccHHHHHHcCCEEEECCCCCCccHHHHHHHHHcCCeEEEcCccCcCC
Confidence 1267999999999999999999999999999999999999999999999999999999999999
No 4
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=100.00 E-value=4.7e-177 Score=1438.87 Aligned_cols=450 Identities=36% Similarity=0.499 Sum_probs=410.6
Q ss_pred CccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCCCCh
Q psy2261 5 NGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSRNTD 84 (857)
Q Consensus 5 ~~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar~~~ 84 (857)
.++++||||+||+||++||+.|.++||+|+||+||+++|+++||+|+.|+++||||||||||||||||+||||||+|+.
T Consensus 12 ~~~~aliSV~DK~gl~~~A~~L~~~G~eiisTgGTak~L~~~Gi~v~~Vs~~TgfPEildGRVKTLHP~ihggiLa~r~- 90 (464)
T 1zcz_A 12 HMKRILVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKTLHPEIFAGILGPEP- 90 (464)
T ss_dssp -CCEEEEECSSTGGGHHHHHHHHHTTCEEEECHHHHHHHHHTTCCCEEGGGGSCCCCGGGGTTTTCCHHHHHHHHSSSC-
T ss_pred hccEEEEEecCccCHHHHHHHHHHCCCEEEECchHHHHHHHCCCceEEHHhhcCCchhhcCcccccChhheeeeeecCC-
Confidence 4689999999999999999999999999999999999999999999999999999999999999999999999999765
Q ss_pred hhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHHHcCC
Q psy2261 85 SDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDIEASP 164 (857)
Q Consensus 85 ~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el~~~~ 164 (857)
+|||||||||| |||||||||||||||||||++|+|||||+||+.++++
T Consensus 91 ------------~IDlVVvNLYP---------------iEnIDIGGpsmiRaAAKN~~~V~vv~dp~dY~~vl~~----- 138 (464)
T 1zcz_A 91 ------------RWDVVFVDLYP---------------PPDIDIGGVALLRAAAKNWKKVKPAFDMETLKLAIEI----- 138 (464)
T ss_dssp ------------SCSEEEECCCC---------------TTCCCSHHHHHHHHHHHTTTTCEEECSHHHHHHHHHC-----
T ss_pred ------------CccEEEEcCCc---------------hhhhccccHHHHHHHHHcCCCEEEECCHHHHHHHHHh-----
Confidence 99999999999 9999999999999999999999999999999999986
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhHHHHhhhhhccCC-ccc-ccccccCCCCCCcccccccccCccchhhhcCCC-CCCC
Q psy2261 165 TKETSEEIRKKLALKAFTHTSDYDTNIVDYFRKQYSP-NEA-QISLRYGMNPHQSPAQIFTTLDKLPIKVLNGQP-GFIN 241 (857)
Q Consensus 165 ~G~~s~~~R~~LA~kAF~~tA~YD~aIa~yl~~~~~~-~~~-~~~LRYGENPHQ~~AalY~~~~~~~~~~L~Gk~-SyNN 241 (857)
+|+++|++||.|||+|||+||++|+++|-+.+.. ..+ .+.|||||||||+ |+||... .+++|||||+ ||||
T Consensus 139 ---~~~~~R~~LA~kAF~~Ta~YD~aIa~~fp~~~~~~~~~~~~~LRYGENPHQ~-Aa~Y~~~--~~~~qL~GKelSYNN 212 (464)
T 1zcz_A 139 ---DDEETRKYLAGMTFAFTSVYDSIRANQFVEGISLAFKREDLQLRYGENPHEK-AFVYGKP--AFEILHEGKTISFNN 212 (464)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEECCCCSCSSSTTSC-EEEESCC--SEEEECSSSCCCHHH
T ss_pred ---ccHHHHHHHHHHHHHHHhhhhHHHhcccchhEEeecccccCccCCCCCCCcc-cceeCCC--ccceeccCccCCcch
Confidence 7899999999999999999999999987554322 467 8999999999997 7899764 7889999998 9999
Q ss_pred hhhhHHHHHHHHHHHhhcCCCcEEEeccCCcceeeeccCCChhhhhhhhhcccccCCchHHHHHHHHHcCCCccCCCCEE
Q psy2261 242 LLDALNGWQLVKELKTALNLPAAASFKHCSPAGAAVFRRLTDPEIKAAMVEDLEDGMSELAVAYARARGADRMSSFGDFI 321 (857)
Q Consensus 242 ilDadaA~~lv~e~~~~~~~paavivKH~nPcG~A~~~~l~~~~~~~~~~~~~~~~~~~l~~Ay~~A~~~Dp~SAFGgII 321 (857)
|+|+|+||++|+||+ +||||||||+||||+|+| +++++||+|||+|||+|||||||
T Consensus 213 i~DadaA~~lv~ef~----~Pa~aivKH~nPCGvA~g--------------------~~l~~Ay~~A~~~Dp~SaFGGii 268 (464)
T 1zcz_A 213 ILDAENAWFMAKNLP----RMGAVVVKHQSPCGAAIG--------------------EDKVEIVKKAIEADDESSFGGIL 268 (464)
T ss_dssp HHHHHHHHHHHHTCS----SSEEEEEETTEEEEEEEC--------------------SCHHHHHHHHHHHTTTTTTTEEE
T ss_pred hhhhHHHHHHHHhcC----CCeEEEEecCCccceecC--------------------cchHHHHHHHHhcCCccccCCEE
Confidence 999999999999997 599999999999999999 36777777777777777777776
Q ss_pred ecCCccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecCchhcccchhHHHHhhhccccceEEEeeCCeEE
Q psy2261 322 ALSDECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILELPEFAIRDLTVATIALKYTQSNSVVYAKNGQVI 401 (857)
Q Consensus 322 a~n~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~~~~~~~dl~~a~~~~~~~ksn~v~~~k~~~~v 401 (857)
T Consensus 269 -------------------------------------------------------------------------------- 268 (464)
T 1zcz_A 269 -------------------------------------------------------------------------------- 268 (464)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccCCccchhhhhhhccccchhhhhcCCCccchhhhhhhhhhccccccccccccccCCCCCccccccccCCCCCCCCCh
Q psy2261 402 GIGAGQQSRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFDGPPPEPMTE 481 (857)
Q Consensus 402 giG~Gq~~Rv~~~~lA~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (857)
T Consensus 269 -------------------------------------------------------------------------------- 268 (464)
T 1zcz_A 269 -------------------------------------------------------------------------------- 268 (464)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhhhhhcccchhhhhhhhhhhhhhHHHHHHHHHhcCCcccccCceeeeccccCHHHHHHhccceEEEEEcCCCChh
Q psy2261 482 KEKADFIYTLHGVSIKAAMVEDLEDGMSELAVAYARARGADRMSSFGDFIALSDECDTSTAEVIGREVSDGIICPGITLG 561 (857)
Q Consensus 482 ~~~~~~~~~kh~npcg~a~~~~~~~~~~~~~eAy~kA~~~DpvSAFGgiIA~Nr~vD~~tA~~i~~~f~EvIIAP~fe~e 561 (857)
|+||+||.+||++| ++|+||||||+|+||
T Consensus 269 --------------------------------------------------A~Nr~vD~~tA~~i-~~F~EvVIAP~~~~e 297 (464)
T 1zcz_A 269 --------------------------------------------------AVNFEMDEEVAKSL-KKYLEVIVAPSFTQE 297 (464)
T ss_dssp --------------------------------------------------EESSCBCHHHHHHC-CSCEEEEECSCBCHH
T ss_pred --------------------------------------------------EEcCccCHHHHHhh-hheEEEEEcCCCCHH
Confidence 99999999999999 999999999999999
Q ss_pred HHHHHHhccCCcEEEEEeCCCCCCCCceEEEEeeeEEEeecCCCCCCcccccccccccCCCCHHHHHhhHHHHHHhhhcc
Q psy2261 562 AREILEKKKGGKYVILEVDPNYTPSPIERRQVFGLTLEQKRNNFNVTPELFTNIVSEEKWLPEFAIRDLTVATIALKYTQ 641 (857)
Q Consensus 562 ALeiL~~KKnlR~~iL~~~~~~~~~~~e~r~v~Gg~L~Q~~d~~~~~~~~~~~vvT~~~~~~~~~~~dl~fa~~v~k~~k 641 (857)
||||| +|||+| +|+++ . ++.+++|+|+||+|+|++|. ++++| ++||+++| +++|++||+|||+||||
T Consensus 298 AleiL-~KKnlR--lL~~~-~--~~~~e~r~v~GG~LvQ~~D~---~~~~~-~vVT~~~p-t~~e~~DL~FAwkv~K~-- 364 (464)
T 1zcz_A 298 AIEVL-SKKKVR--LLKPG-D--YASWAGKMAFGSLVLSERKY---PEGNF-ELVVGEPL-SEKELEDLEFAYRVVEG-- 364 (464)
T ss_dssp HHHHH-TTSSCE--EEEEC-C--CCCEEEEEETTEEEEEECCC---CCSCC-EEEESCCC-CHHHHHHHHHHHHHHHH--
T ss_pred HHHHH-hcCCeE--EEEEC-C--CCCceEEEEcCEEEEECCCC---Chhhc-eEecCCCC-CHHHHHHHHHHHHHHhh--
Confidence 99999 999999 66664 2 23689999999999999998 56677 89999974 76666666666666555
Q ss_pred ccchhhcccCceecccCCccccchhccccCCCCchhhhhhhHHHHHHhhccccceEEEeeCCeEEeecCCCCchhHHHHH
Q psy2261 642 SNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKLPEFAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRL 721 (857)
Q Consensus 642 snaiv~ak~~~~vgigaGQ~sRv~~~r~a~~~~~~~~~~DLl~a~~~~k~vkSNsIv~akdg~tvGIGaGQ~sRV~~~ri 721 (857)
||||||||+|||||||||+||||||||+||
T Consensus 365 --------------------------------------------------vKSNAIv~akdg~tvGiGaGQ~sRV~s~ri 394 (464)
T 1zcz_A 365 --------------------------------------------------AKSNAVLIAKDGVTVGIGSGQPSRKRAAWI 394 (464)
T ss_dssp --------------------------------------------------SCSSCEEEEETTEEEEEECSCSSHHHHHHH
T ss_pred --------------------------------------------------cccceEEEEeCCeEEEECCCCCchHHHHHH
Confidence 556677999999999999999999999999
Q ss_pred HHHhhhhhhhhhcCCcccccccccccccccchhhhhhccCCcCCCCchhhhhcccCCCCCCCCCHHHHHhhhhccCceEE
Q psy2261 722 AGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFDGPPPEPMTEKEKADFIYTLHGVSV 801 (857)
Q Consensus 722 A~~KA~~~~lr~h~~v~~~~f~~~~~r~e~~n~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~er~~~~~~l~G~Vl 801 (857)
|++||+. + .+|+||
T Consensus 395 A~~kA~~------------------------------------------------------------~------~~G~vl 408 (464)
T 1zcz_A 395 ATVMAGE------------------------------------------------------------K------AKGAVA 408 (464)
T ss_dssp HHHHHGG------------------------------------------------------------G------GTTCEE
T ss_pred HHHHhhc------------------------------------------------------------c------cCCeEE
Confidence 9999952 1 369999
Q ss_pred eccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcCCCCCCC
Q psy2261 802 ASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHNTRLFHH 857 (857)
Q Consensus 802 aSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG~RhFrH 857 (857)
||||||||+|+||.|+++||+|||||||||||+|||++||||||+|||||+|||||
T Consensus 409 ASDAFFPF~D~v~~aa~aGv~aIiQPGGSiRD~evI~aane~giaMvfTG~RhF~H 464 (464)
T 1zcz_A 409 ASDAFFPFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGITFYKAPSRVFRH 464 (464)
T ss_dssp EESSCCSSHHHHHHHHHTTCCEEEECCCCTTHHHHHHHHHHHTCEEEECSSCCCCC
T ss_pred EecccCCchhhHHHHHHhCCeEEEcCCCCcCcHHHHHHHHHcCCeEEEccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999
No 5
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=100.00 E-value=2.2e-37 Score=348.27 Aligned_cols=166 Identities=61% Similarity=1.007 Sum_probs=151.1
Q ss_pred CccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecCc------------------------------hh--
Q psy2261 325 DECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILELP------------------------------EF-- 372 (857)
Q Consensus 325 ~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~~------------------------------~~-- 372 (857)
|+||.+||+.|++.|+||||||+|+++|||||++|||+||++|+++ .+
T Consensus 324 ~~vD~~tA~~i~~~f~EvVIAP~y~~eAleiL~~KKn~r~~vL~~~~~~~~~~~e~r~v~Gg~L~Q~rd~~~~~~~~~~~ 403 (593)
T 1g8m_A 324 DICDVPTAKIISREVSDGVVAPGYEEEALKILSKKKNGGYCVLQMDPNYEPDDNEIRTLYGLQLMQKRNNAVIDRSLFKN 403 (593)
T ss_dssp SCBCHHHHHHHHTSCEEEEEESCBCHHHHHHHHHGGGGTCEEEEECTTCCCCSEEEEEETTEEEEEECCCCCCSGGGGCC
T ss_pred CccCHHHHHHHhhhEEEEEEcCCCCHHHHHHHHhCcCcceEEEEECCCCCCCCeeEEEECcEEEEECCCCCCCCHHHHHH
Confidence 4679999999999999999999999999999999999996655431 01
Q ss_pred -----------cccchhHHHHhhhccccceEEEeeCCeEEeeccCCccchhhhhhhccccchhhhhcCCCccchhhhhhh
Q psy2261 373 -----------AIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGV 441 (857)
Q Consensus 373 -----------~~~dl~~a~~~~~~~ksn~v~~~k~~~~vgiG~Gq~~Rv~~~~lA~~k~~~~~~~~~~~~~~~~~~~~~ 441 (857)
..+||.|||++++|||||||+|+|+|++||||+||||||||+|||++||++||+|+||..-.-+|.+++
T Consensus 404 vVT~~~~pt~~e~~DL~fAw~v~K~vkSNaIv~akdg~tvGiGaGQ~sRV~~~rlA~~KA~~w~lr~~~~v~~~~~~~~~ 483 (593)
T 1g8m_A 404 IVTKNKTLPESAVRDLIVASIAVKYTQSNSVCYAKDGQVIGIGAGQQSRIHCTRLAGDKANSWWLRHHPRVLSMKFKAGV 483 (593)
T ss_dssp BCSSSCCCCHHHHHHHHHHHHHHHTSCSSCEEEEETTEEEEEECSCSCHHHHHHHHHHHHHHHHHTTCHHHHTCEECTTC
T ss_pred hccCCCCcCHHHHHHHHHHHHHHHhcCcceEEEEECCeEEEECCCCCchHHHHHHHHHHhhhhhhhcchhhhcccccchh
Confidence 136899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccccccccccccccCCCCCccccccccCCCCCCCCChhhhhhhhhhh
Q psy2261 442 KRAEKSNAIDNYILGTIGKDMDTKTWESFFDGPPPEPMTEKEKADFIYTL 491 (857)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 491 (857)
||++++|+||.|+-|..++++....|+++|.. .|+++|++||.+.+--.
T Consensus 484 ~r~~~~n~id~~~~~~~~~~~~~~~~~~~f~~-~p~~~t~~ek~~w~~~~ 532 (593)
T 1g8m_A 484 KRAEVSNAIDQYVTGTIGEDEDLVKWQAMFEE-VPAQLTEAEKKQWIAKL 532 (593)
T ss_dssp CHHHHHHHHHHHHHTCSCSTHHHHHHHTTEEE-CCCCCCHHHHHHHHTTC
T ss_pred hhhhhhcchhhhcccccccchhhhhhhhhhcc-ccccccHHHHHhhhccc
Confidence 99999999999999999999999999999987 56899999996554433
No 6
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=99.94 E-value=5.6e-31 Score=276.68 Aligned_cols=245 Identities=12% Similarity=0.002 Sum_probs=163.4
Q ss_pred hcccchhhhhhhhhhhhhhHHHHHHHHHhcCCcccccCceeeeccccCHHHHHHhccceEEEEEcCCCChhHHHHHHhcc
Q psy2261 491 LHGVSIKAAMVEDLEDGMSELAVAYARARGADRMSSFGDFIALSDECDTSTAEVIGREVSDGIICPGITLGAREILEKKK 570 (857)
Q Consensus 491 kh~npcg~a~~~~~~~~~~~~~eAy~kA~~~DpvSAFGgiIA~Nr~vD~~tA~~i~~~f~EvIIAP~fe~eALeiL~~KK 570 (857)
++-+||.+++...-.. +....+..+++++.||++|.+++..+...+..+...+-+.+..+.++..++.+|.+..
T Consensus 27 ~G~~~~ii~l~g~~d~------~l~~~~~~~i~ig~~G~ii~~lk~~~v~~vvmaG~V~rp~l~~~~~D~~~~~~l~~~~ 100 (283)
T 4ggi_A 27 AGRAFAVMRLRSFADP------SLDRYPGADVGIGEFGKIFKALRAEGCDVVCFAGNVSRPDFSALMPDARGLKVLPSLI 100 (283)
T ss_dssp TTCCCCEEEETTTCCS------TTTTSSEEEECTTCTTHHHHHHHHHTCCCEEEESCCCCCCSTTCCCCGGGTTTSHHHH
T ss_pred CCCCeEEEEeCCCCch------hhhhCCceEEcHHHHHHHHHHHHHhchhheeeecceehhhhccccCCHHHHHHHHHHH
Confidence 4457777777432111 1223456788999999999999999988887777777777778888888888775543
Q ss_pred CCcEEEEEeCCCCCCCCceEEEEeeeEEEeecCCCCCCcccccccccccCCCCHHHHHhhHHHHHHhhhccccchhhccc
Q psy2261 571 GGKYVILEVDPNYTPSPIERRQVFGLTLEQKRNNFNVTPELFTNIVSEEKWLPEFAIRDLTVATIALKYTQSNSVVYAKN 650 (857)
Q Consensus 571 nlR~~iL~~~~~~~~~~~e~r~v~Gg~L~Q~~d~~~~~~~~~~~vvT~~~~~~~~~~~dl~fa~~v~k~~ksnaiv~ak~ 650 (857)
+++ -. -|......-..+-.-.|..+++..+........+ .++|+++| ++++++|+.|||+++||++||+|-
T Consensus 101 ~~~--~~-gDd~lL~~i~~~~e~~G~~vi~~~~~~p~l~~~~-g~~t~~~p-~~~~~~di~~~~~v~~~~~~~dig---- 171 (283)
T 4ggi_A 101 VAA--RK-GDDALLRRVLDEFEKEGFEIEGAHEVMGEMTLPR-GRLGKVSP-APEHMADIDKALDVAREIGRLDIG---- 171 (283)
T ss_dssp HHH--HH-CTTHHHHHHHHHHHHTTCCCCCSHHHHHHHBCCS-EESSSCCC-CGGGHHHHHHHHHHHHHHHHTTSC----
T ss_pred Hhh--hc-ccchhHHHHHHHHHhCCcceechhhhhhHhhhhc-CcccccCc-hHHHHHHHHHHHHHHHHhhccccc----
Confidence 221 00 0100000000000112333333222110001123 57888874 888888888888888888777661
Q ss_pred CceecccCCccccchhccccCCCCchhhhhhhHHHHHHhhccccceEEEeeCCeEEeecCCCCchhHHHHHHHHhhhhhh
Q psy2261 651 GQVIGIGAGQQSRIHCTRLAGDKLPEFAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKVDNWY 730 (857)
Q Consensus 651 ~~~vgigaGQ~sRv~~~r~a~~~~~~~~~~DLl~a~~~~k~vkSNsIv~akdg~tvGIGaGQ~sRV~~~riA~~KA~~~~ 730 (857)
| -|+++||+|||||+||++|++..|+|..|+...
T Consensus 172 -Q--------------------------------------------~vvv~~~~~~~iea~~gt~~~~~r~~~~~~~~~- 205 (283)
T 4ggi_A 172 -Q--------------------------------------------GAVVCEGLVLAVEAQEGTDAMLRRVADLPEAIR- 205 (283)
T ss_dssp -S--------------------------------------------EEEEETTEEEEECSSSCHHHHHHHHHHSCGGGS-
T ss_pred -e--------------------------------------------eeEecCCeEEEecCccchHHHHHHHHHHHHhhh-
Confidence 1 178999999999999999999999999988521
Q ss_pred hhhcCCcccccccccccccccchhhhhhccCCcCCCCchhhhhcccCCCCCCCCCHHHHHhhhhccCceEEeccccccC-
Q psy2261 731 MRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKDMDTKTWESFFDGPPPEPMTEKEKADFIYTLHGVSVASDAFFPF- 809 (857)
Q Consensus 731 lr~h~~v~~~~f~~~~~r~e~~n~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~er~~~~~~l~G~VlaSDAFFPF- 809 (857)
.+.... + ..-.++++++||+||||
T Consensus 206 ----------------~~~~~~--------~-------------------------------g~~~k~~k~~qD~~fd~P 230 (283)
T 4ggi_A 206 ----------------GRAERR--------L-------------------------------GVLAKAPKPIQETRVALP 230 (283)
T ss_dssp ----------------CBTTBC--------C-------------------------------CEEEECCCCC---CCCCC
T ss_pred ----------------cccccc--------c-------------------------------cceecccccccccccCCc
Confidence 000000 0 01257899999999999
Q ss_pred ---CCCHhHHHHcCCeEE-ecCCCCC--CcHHHHHHHHhCCcEEEEcC
Q psy2261 810 ---RANIDRAVLSGAKFV-SAPGGSN--NDQSVIDAANYHKLTLIHHN 851 (857)
Q Consensus 810 ---~D~Vd~Aa~~GV~aI-iQPGGSi--RD~EVI~Aane~gIaMvFTG 851 (857)
+|+|+.|+++|+++| ||||||+ ||+|||++||+|||+|+--.
T Consensus 231 ~iG~dti~~~~~ag~~~ivi~~g~si~~~~~~~i~~a~~~gi~~~~~~ 278 (283)
T 4ggi_A 231 TIGVATIHRAARAGLAGIVGEAGRLLVVDREAVIAAADDLGLFVLGVD 278 (283)
T ss_dssp EECHHHHHHHHHTTCCEEEEETTBCEETTHHHHHHHHHHHTCEEEEEC
T ss_pred cccHHHHHHHHHcCCeEEEEcCCCcEEeCHHHHHHHHHHcCCEEEEeC
Confidence 599999999999997 7999997 99999999999999998543
No 7
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=99.92 E-value=2.7e-26 Score=256.36 Aligned_cols=100 Identities=31% Similarity=0.358 Sum_probs=90.9
Q ss_pred CccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecC------c------------------------h---
Q psy2261 325 DECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILEL------P------------------------E--- 371 (857)
Q Consensus 325 ~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~------~------------------------~--- 371 (857)
|+||.+||+.|++.|+||||||+|+++|||||++|||+|++++.- | .
T Consensus 327 r~vD~~tA~~i~~~F~EvVIAP~y~~eAleiL~~KKnlRiL~~~~~~~~~~~~~~e~r~v~GG~LvQ~~d~~~~~~~~~~ 406 (534)
T 4ehi_A 327 GTLDEALANKINEIYVEVIIAANVDEKALAVFEGKKRIKIFTQESPFLIRSFDKYDFKHIDGGFVYQNSDEVGEDELKNA 406 (534)
T ss_dssp EEECHHHHHHHTTSCCSEEEEEEECHHHHHTTSSCSSCEEEECSSSSCCCCCCSEEEEEETTEEEEEECCCCCTTTTTTS
T ss_pred CccCHHHHHHHhhhEEEEEEcCCCCHHHHHHHHhCCCceEEEECCccccCCCCCeEEEEEeeEEEEECCCCCCCCchhcc
Confidence 456999999999999999999999999999999999999998642 1 0
Q ss_pred ----------hcccchhHHHHhhhccccceEEEeeCCeEEeeccCCccchhhhhhhccccchh
Q psy2261 372 ----------FAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKVDNW 424 (857)
Q Consensus 372 ----------~~~~dl~~a~~~~~~~ksn~v~~~k~~~~vgiG~Gq~~Rv~~~~lA~~k~~~~ 424 (857)
...+||.|||++++|+|||||+++|+|++||||+||+|||||+|+|++||++|
T Consensus 407 ~vVT~~~pt~~e~~DL~FAw~v~K~vKSNAIv~akdg~tvGiGaGQ~sRV~s~r~A~~kA~~~ 469 (534)
T 4ehi_A 407 KLMSQREASKEELKDLEIAMKIAAFTKSNNVVYVKNGAMVAIGMGMTSRIDAAKAAIAKAKEM 469 (534)
T ss_dssp EECSSBCCCHHHHHHHHHHHHHHHHSCSSCEEEEETTEEEEEECSSSCHHHHHHHHHHHHHHT
T ss_pred eeeCCCCCCHHHHHHHHHHHHHHHhcCCceEEEEeCCeEEEECCCCcchHHHHHHHHHHHHhh
Confidence 01368999999999999999999999999999999999999999999999985
No 8
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=99.91 E-value=1.3e-25 Score=250.78 Aligned_cols=97 Identities=30% Similarity=0.482 Sum_probs=88.3
Q ss_pred CccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecCc----------------------------------
Q psy2261 325 DECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILELP---------------------------------- 370 (857)
Q Consensus 325 ~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~~---------------------------------- 370 (857)
|+||.+||+.|++.|+||||||+|+++|+|||++|||+|++.+.-+
T Consensus 321 ~~vD~~tA~~i~~~f~EvviAP~~~~eAleiL~~KKnlR~l~~~~~~~~~~e~r~v~GG~LvQ~~D~~~~~~~~~~~~~v 400 (523)
T 3zzm_A 321 TEVSVEMAEYVSTIFTEVIVAPGYAPGALDVLARKKNIRVLVAAEPLAGGSELRPISGGLLIQQSDQLDAHGDNPANWTL 400 (523)
T ss_dssp SCBCHHHHHHHTTSCEEEEEESCBCTTHHHHHTTSSSCEEEECCCCCSSCEEEEEETTEEEEEECCCSCSGGGSGGGCEE
T ss_pred CccCHHHHHHHhhhEEEEEEcCCCCHHHHHHHHhCCCeEEEEecCCCCCCeEEEEEeeeEEEECCCCcccccCCHHHCee
Confidence 4669999999999999999999999999999999999999985210
Q ss_pred -------hhcccchhHHHHhhhccccceEEEeeCCeEEeeccCCccchhhhhhhcccc
Q psy2261 371 -------EFAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKV 421 (857)
Q Consensus 371 -------~~~~~dl~~a~~~~~~~ksn~v~~~k~~~~vgiG~Gq~~Rv~~~~lA~~k~ 421 (857)
+...+||.|||++++|+|||||+++|+|++||||+||+|||||+|+|++||
T Consensus 401 vT~~~pt~~e~~dL~fAw~v~K~vkSNAIv~akdg~tvGiGaGQ~sRV~s~r~A~~kA 458 (523)
T 3zzm_A 401 ATGSPADPATLTDLVFAWRACRAVKSNAIVIAADGATVGVGMGQVNRVDAARLAVERG 458 (523)
T ss_dssp EESSCCCHHHHHHHHHHHHHGGGSCSSCEEEEETTEEEEEECSCSSHHHHHHHHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhccCceEEEEECCeEEEECCCCcchHHHHHHHHHHh
Confidence 012368999999999999999999999999999999999999999999999
No 9
>1zcz_A Bifunctional purine biosynthesis protein PURH; TM1249; HET: PG4; 1.88A {Thermotoga maritima} SCOP: c.24.1.3 c.97.1.4
Probab=99.91 E-value=2e-25 Score=245.41 Aligned_cols=97 Identities=30% Similarity=0.354 Sum_probs=88.0
Q ss_pred CccCchhhhhhcccceeeeecCCCChhHHHHHHHhcCCceeeecCc---------------------------------h
Q psy2261 325 DECDTSTAEVIGREVSDGIICPGITLGAREILEKKKGGKYVILELP---------------------------------E 371 (857)
Q Consensus 325 ~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~kK~~r~~~l~~~---------------------------------~ 371 (857)
|+||.+||+.| +.|+||||||+||++|+||| +|||+|++.+.-| +
T Consensus 272 r~vD~~tA~~i-~~F~EvVIAP~~~~eAleiL-~KKnlRlL~~~~~~~~e~r~v~GG~LvQ~~D~~~~~~~vVT~~~pt~ 349 (464)
T 1zcz_A 272 FEMDEEVAKSL-KKYLEVIVAPSFTQEAIEVL-SKKKVRLLKPGDYASWAGKMAFGSLVLSERKYPEGNFELVVGEPLSE 349 (464)
T ss_dssp SCBCHHHHHHC-CSCEEEEECSCBCHHHHHHH-TTSSCEEEEECCCCCEEEEEETTEEEEEECCCCCSCCEEEESCCCCH
T ss_pred CccCHHHHHhh-hheEEEEEcCCCCHHHHHHH-hcCCeEEEEECCCCCceEEEEcCEEEEECCCCChhhceEecCCCCCH
Confidence 56799999999 99999999999999999999 9999999865311 1
Q ss_pred hcccchhHHHHhhhccccceEEEeeCCeEEeeccCCccchhhhhhhccccch
Q psy2261 372 FAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLAGDKVDN 423 (857)
Q Consensus 372 ~~~~dl~~a~~~~~~~ksn~v~~~k~~~~vgiG~Gq~~Rv~~~~lA~~k~~~ 423 (857)
...+||.|||++++|+|||+|+++|+|++||||+||+|||||+|+|++||.+
T Consensus 350 ~e~~DL~FAwkv~K~vKSNAIv~akdg~tvGiGaGQ~sRV~s~riA~~kA~~ 401 (464)
T 1zcz_A 350 KELEDLEFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGE 401 (464)
T ss_dssp HHHHHHHHHHHHHHHSCSSCEEEEETTEEEEEECSCSSHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhhcccceEEEEeCCeEEEECCCCCchHHHHHHHHHHhhc
Confidence 1246899999999999999999999999999999999999999999999984
No 10
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=99.18 E-value=1.7e-11 Score=117.23 Aligned_cols=114 Identities=15% Similarity=0.213 Sum_probs=80.2
Q ss_pred ccEEEEEecC--CCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCCCC
Q psy2261 6 GKLVILSVSD--KTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSRNT 83 (857)
Q Consensus 6 ~graLISVsD--K~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar~~ 83 (857)
.| +||||+| |++++++|+.|.++||+|+||+||+++|+++||+|+.|++++. +|| ++.||.|.
T Consensus 25 ~g-vliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GTa~~L~~~Gi~v~~v~k~~e-----gg~-~~~~~~i~-------- 89 (143)
T 2yvq_A 25 KG-ILIGIQQSFRPRFLGVAEQLHNEGFKLFATEATSDWLNANNVPATPVAWPSQ-----EGQ-NPSLSSIR-------- 89 (143)
T ss_dssp SE-EEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHHHHHHHHTTCCCEEECCGGG-----C------CBCHH--------
T ss_pred CC-EEEEecccchHHHHHHHHHHHHCCCEEEECchHHHHHHHcCCeEEEEEeccC-----CCc-ccccccHH--------
Confidence 46 9999996 9999999999999999999999999999999999999999862 334 33444432
Q ss_pred hhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHH
Q psy2261 84 DSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIK 158 (857)
Q Consensus 84 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~ 158 (857)
++-+. ..|||||.---|- . .. .--|-.|-|+|..+ +|-++|+++-=..+++
T Consensus 90 -----d~i~~--g~i~lVInt~~~~----~-------~~----~~d~~~iRR~Av~~--~IP~~T~~~tA~a~~~ 140 (143)
T 2yvq_A 90 -----KLIRD--GSIDLVINLPNNN----T-------KF----VHDNYVIRRTAVDS--GIPLLTNFQVTKLFAE 140 (143)
T ss_dssp -----HHHHT--TSCCEEEECCCCC----G-------GG----HHHHHHHHHHHHHT--TCCEECSHHHHHHHHH
T ss_pred -----HHHHC--CCceEEEECCCCC----C-------cC----CccHHHHHHHHHHh--CCCeEcCHHHHHHHHH
Confidence 22222 3589987433221 0 11 12367778888775 7888888776555544
No 11
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=98.81 E-value=4.5e-09 Score=104.91 Aligned_cols=116 Identities=21% Similarity=0.232 Sum_probs=89.7
Q ss_pred CccEEEEEec--CCCChHHHHHHHHHC--CcEEEEehhHHHHHHh-CCCCceecccccCCCcccCCcccccchhhhcccc
Q psy2261 5 NGKLVILSVS--DKTGLLPFAKQLSGL--GYTLVASGGTAKALRD-ENIPVRDVADITGAPEMLGGRVKTLHPAVHAGIL 79 (857)
Q Consensus 5 ~~graLISVs--DK~glvelAr~L~~l--GfeIiATgGTAk~L~e-~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGIL 79 (857)
..|++||||. ||+.++++|+.|.++ ||+|+||+||+++|++ +||+|+.|.|+. | +|| |.|..-|.
T Consensus 26 ~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~AT~gTa~~L~e~~Gl~v~~v~k~~---e--GG~-----pqI~d~I~ 95 (178)
T 1vmd_A 26 KKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYATGTTGALLQEKLGLKVHRLKSGP---L--GGD-----QQIGAMIA 95 (178)
T ss_dssp SSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEECHHHHHHHHHHHCCCCEECSCGG---G--THH-----HHHHHHHH
T ss_pred CCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEEchHHHHHHHHHhCceeEEEeecC---C--CCC-----chHHHHHH
Confidence 3579999999 599999999999999 9999999999999999 999999998863 2 232 44433332
Q ss_pred CCCChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHH
Q psy2261 80 SRNTDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKD 159 (857)
Q Consensus 80 ar~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~e 159 (857)
. ..|||||.---|... ++ -+-=|-.+.|+|..+ +|-++|+.+-=..+++.
T Consensus 96 ~---------------geIdlVInt~dPl~~---~~----------h~~D~~~IRR~A~~~--~IP~~TnlatA~A~v~a 145 (178)
T 1vmd_A 96 E---------------GKIDVLIFFWDPLEP---QA----------HDVDVKALIRIATVY--NIPVAITRSTADFLISS 145 (178)
T ss_dssp T---------------TSCCEEEEECCSSSC---CT----------TSCCHHHHHHHHHHT--TCCEESSHHHHHHHHHS
T ss_pred C---------------CCccEEEEccCccCC---Cc----------ccccHHHHHHHHHHc--CCCEEeCHHHHHHHHHH
Confidence 2 478999977777652 21 022367888998886 88899999887777776
Q ss_pred H
Q psy2261 160 I 160 (857)
Q Consensus 160 l 160 (857)
|
T Consensus 146 i 146 (178)
T 1vmd_A 146 P 146 (178)
T ss_dssp G
T ss_pred H
Confidence 4
No 12
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=98.71 E-value=8.3e-09 Score=125.27 Aligned_cols=112 Identities=22% Similarity=0.266 Sum_probs=86.6
Q ss_pred ccEEEEEecC--CCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccc-cCCCcccCCcccccchhhhccccCCC
Q psy2261 6 GKLVILSVSD--KTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADI-TGAPEMLGGRVKTLHPAVHAGILSRN 82 (857)
Q Consensus 6 ~graLISVsD--K~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~Vskv-TgfPEil~GRVKTLHPkIhgGILar~ 82 (857)
.|++||||+| |++++++|+.|.++||+|+||+||+++|+++||+|+.|+|+ +|+|+++|
T Consensus 942 ~g~vlisv~d~~K~~~~~~a~~l~~~G~~i~aT~gTa~~l~~~gi~~~~v~~~~~g~p~i~d------------------ 1003 (1073)
T 1a9x_A 942 HGRALLSVREGDKERVVDLAAKLLKQGFELDATHGTAIVLGEAGINPRLVNKVHEGRPHIQD------------------ 1003 (1073)
T ss_dssp SSEEEEECCGGGGTTHHHHHHHHHHTTCEEEECHHHHHHHHTTTCCCEECBCTTTCSSBHHH------------------
T ss_pred cceEEEEecCcCHHHHHHHHHHHHHCCCEEEEcCchHHHHHhCCceEEEEeecCCCCccHHH------------------
Confidence 6899999996 99999999999999999999999999999999999999999 78888762
Q ss_pred ChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHHHc
Q psy2261 83 TDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDIEA 162 (857)
Q Consensus 83 ~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el~~ 162 (857)
.+++ ..|||||.---. ..... -|-.+=|+|..+ +|.++|..+--..+++.|+.
T Consensus 1004 ------~~~~---~~~~~~~~~~~~------------~~~~~----~~~~~r~~a~~~--~~~~~t~~~~~~~~~~~~~~ 1056 (1073)
T 1a9x_A 1004 ------RIKN---GEYTYIINTTSG------------RRAIE----DSRVIRRSALQY--KVHYDTTLNGGFATAMALNA 1056 (1073)
T ss_dssp ------HHHH---TCCSEEEECCCS------------HHHHH----HTHHHHHHHHHT--TCEEESSHHHHHHHHHHHTC
T ss_pred ------HHHc---CCeEEEEECCCC------------ccccc----chHHHHHHHHHh--CCCEEccHHHHHHHHHHHHh
Confidence 1233 357888743211 11111 244444555554 78999999998888888864
No 13
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=98.68 E-value=2.2e-08 Score=95.96 Aligned_cols=117 Identities=19% Similarity=0.318 Sum_probs=89.9
Q ss_pred ccEEEEEec--CCCChHHHHHHHHHC--CcEEEEehhHHHHHHh-CCCCceecccccCCCcccCCcccccchhhhccccC
Q psy2261 6 GKLVILSVS--DKTGLLPFAKQLSGL--GYTLVASGGTAKALRD-ENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILS 80 (857)
Q Consensus 6 ~graLISVs--DK~glvelAr~L~~l--GfeIiATgGTAk~L~e-~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILa 80 (857)
+.++=+||. ||+.++++|+.|.++ ||+|+||+||+++|++ +||+|+.|.|+. |+|| |.|..-|..
T Consensus 3 ~~~ialsv~D~dK~~~v~~a~~~~~ll~Gf~l~AT~gTa~~L~e~~Gl~v~~v~k~~-----~eG~-----p~I~d~I~~ 72 (134)
T 2xw6_A 3 MRALALIAHDAKKEEMVAFCQRHREVLARFPLVATGTTGRRIEEATGLTVEKLLSGP-----LGGD-----QQMGARVAE 72 (134)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHTHHHHTTSCEEECHHHHHHHHHHHCCCCEECSCGG-----GTHH-----HHHHHHHHT
T ss_pred ccEEEEEEecccHHHHHHHHHHHHHHhCCCEEEEccHHHHHHHHhhCceEEEEEecC-----CCCc-----chHHHHHHC
Confidence 346778899 699999999999999 9999999999999999 999999999864 1232 444333322
Q ss_pred CCChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHH
Q psy2261 81 RNTDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDI 160 (857)
Q Consensus 81 r~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el 160 (857)
..||+||.---|... ++ -+-=|-.+.|+|..+ +|-++|+.+-=..+++.|
T Consensus 73 ---------------geIdlVInt~~pl~~---~~----------h~~D~~~IrR~A~~~--~IP~~T~latA~a~v~al 122 (134)
T 2xw6_A 73 ---------------GRILAVIFFRDPLTA---QP----------HEPDVQALLRVCDVH--GVPLATNPMAAEALIPWL 122 (134)
T ss_dssp ---------------TCEEEEEEECCTTTC---CT----------TSCCSHHHHHHHHHH--TCCEECSHHHHHHHHHHH
T ss_pred ---------------CCccEEEEccCcccC---CC----------ccchHHHHHHHHHHc--CCCeEcCHHHHHHHHHHH
Confidence 479999977777642 11 012267788888884 799999999988888888
Q ss_pred Hc
Q psy2261 161 EA 162 (857)
Q Consensus 161 ~~ 162 (857)
+.
T Consensus 123 ~~ 124 (134)
T 2xw6_A 123 QS 124 (134)
T ss_dssp HT
T ss_pred HH
Confidence 54
No 14
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=98.68 E-value=3.8e-09 Score=103.11 Aligned_cols=115 Identities=21% Similarity=0.233 Sum_probs=86.2
Q ss_pred ccEEEEEec--CCCChHHHHHHHHHC--CcEEEEehhHHHHHHh-CCCCceecccccCCCcccCCcccccchhhhccccC
Q psy2261 6 GKLVILSVS--DKTGLLPFAKQLSGL--GYTLVASGGTAKALRD-ENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILS 80 (857)
Q Consensus 6 ~graLISVs--DK~glvelAr~L~~l--GfeIiATgGTAk~L~e-~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILa 80 (857)
.|++|+||. ||+.++++|+.|.++ ||+|+||+||+++|++ +||+|+.|.|+. | +|| |.|..-|..
T Consensus 11 ~g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~gTa~~L~e~~Gl~v~~v~k~~---e--GG~-----p~I~d~I~~ 80 (152)
T 1b93_A 11 RKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATGTTGNLISRATGMNVNAMLSGP---M--GGD-----QQVGALISE 80 (152)
T ss_dssp SCEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEETTHHHHHHHHHCCCCEEECCGG---G--THH-----HHHHHHHHT
T ss_pred CCEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEccHHHHHHHHHhCceeEEEEecC---C--CCC-----chHHHHHHC
Confidence 479999999 599999999999999 9999999999999999 999999998863 2 232 444333322
Q ss_pred CCChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHH
Q psy2261 81 RNTDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDI 160 (857)
Q Consensus 81 r~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el 160 (857)
..||+||.---|... ++ . +-=|-.+.|+|..+ +|-++|+.+-=..+++.+
T Consensus 81 ---------------geIdlVInt~~pl~~---~~--h--------~~D~~~IrR~A~~~--~IP~~T~latA~a~v~ai 130 (152)
T 1b93_A 81 ---------------GKIDVLIFFWDPLNA---VP--H--------DPDVKALLRLATVW--NIPVATNVATADFIIQSP 130 (152)
T ss_dssp ---------------TCCCEEEEECCTTSC---CT--T--------HHHHHHHHHHHHHT--TCCEESSHHHHHHHHTSG
T ss_pred ---------------CCccEEEEcCCcccC---Cc--c--------cccHHHHHHHHHHc--CCCEEeCHHHHHHHHHHH
Confidence 468999977777641 11 0 12367788888886 788888877666665554
No 15
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=98.49 E-value=2.9e-09 Score=112.23 Aligned_cols=116 Identities=12% Similarity=0.055 Sum_probs=95.4
Q ss_pred HHcCCCccCCCCEEecCCccCchhhhhhcccceeeeecCCCChhHHHHHHHh-----cC----Cceee----------ec
Q psy2261 308 ARGADRMSSFGDFIALSDECDTSTAEVIGREVSDGIICPGITLGAREILEKK-----KG----GKYVI----------LE 368 (857)
Q Consensus 308 A~~~Dp~SAFGgIIa~n~~~d~e~A~~i~~~f~EViiAP~~~~~A~eiL~~k-----K~----~r~~~----------l~ 368 (857)
+..+++++.||+++.++++.+...+..++.-+-+.+..+.++..++.+|.+. ++ ++.++ +.
T Consensus 48 ~~~~i~ig~~G~ii~~lk~~~v~~vvmaG~V~rp~l~~~~~D~~~~~~l~~~~~~~~~gDd~lL~~i~~~~e~~G~~vi~ 127 (283)
T 4ggi_A 48 PGADVGIGEFGKIFKALRAEGCDVVCFAGNVSRPDFSALMPDARGLKVLPSLIVAARKGDDALLRRVLDEFEKEGFEIEG 127 (283)
T ss_dssp SEEEECTTCTTHHHHHHHHHTCCCEEEESCCCCCCSTTCCCCGGGTTTSHHHHHHHHHCTTHHHHHHHHHHHHTTCCCCC
T ss_pred CceEEcHHHHHHHHHHHHHhchhheeeecceehhhhccccCCHHHHHHHHHHHHhhhcccchhHHHHHHHHHhCCcceec
Confidence 3456899999999999999999999999999999999999999998876553 22 11100 00
Q ss_pred ----Cc---------------hhcccchhHHHHhhhccccceE---EEeeCCeEEeeccCCccchhhhhhhccccch
Q psy2261 369 ----LP---------------EFAIRDLTVATIALKYTQSNSV---VYAKNGQVIGIGAGQQSRIHCTRLAGDKVDN 423 (857)
Q Consensus 369 ----~~---------------~~~~~dl~~a~~~~~~~ksn~v---~~~k~~~~vgiG~Gq~~Rv~~~~lA~~k~~~ 423 (857)
+| +...+|+.|+|.++++++||+| +++++++++|||+||.+|+++.|.|..|+..
T Consensus 128 ~~~~~p~l~~~~g~~t~~~p~~~~~~di~~~~~v~~~~~~~digQ~vvv~~~~~~~iea~~gt~~~~~r~~~~~~~~ 204 (283)
T 4ggi_A 128 AHEVMGEMTLPRGRLGKVSPAPEHMADIDKALDVAREIGRLDIGQGAVVCEGLVLAVEAQEGTDAMLRRVADLPEAI 204 (283)
T ss_dssp SHHHHHHHBCCSEESSSCCCCGGGHHHHHHHHHHHHHHHHTTSCSEEEEETTEEEEECSSSCHHHHHHHHHHSCGGG
T ss_pred hhhhhhHhhhhcCcccccCchHHHHHHHHHHHHHHHHhhccccceeeEecCCeEEEecCccchHHHHHHHHHHHHhh
Confidence 01 1234689999999999999999 9999999999999999999999999988764
No 16
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=66.49 E-value=2.9 Score=42.95 Aligned_cols=44 Identities=25% Similarity=0.422 Sum_probs=35.0
Q ss_pred ceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCc
Q psy2261 798 GVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKL 845 (857)
Q Consensus 798 G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gI 845 (857)
+.++.-.-.. =.+.++.|+++|.+.|+-|| -|+|||++|+++|+
T Consensus 64 ~~~IGAGTVl-t~~~a~~ai~AGA~fivsP~---~~~evi~~~~~~~v 107 (217)
T 3lab_A 64 EAIVGAGTVC-TADDFQKAIDAGAQFIVSPG---LTPELIEKAKQVKL 107 (217)
T ss_dssp TSEEEEECCC-SHHHHHHHHHHTCSEEEESS---CCHHHHHHHHHHHH
T ss_pred CCeEeecccc-CHHHHHHHHHcCCCEEEeCC---CcHHHHHHHHHcCC
Confidence 3344333333 25678999999999999999 59999999999999
No 17
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=65.91 E-value=3.3 Score=42.87 Aligned_cols=48 Identities=17% Similarity=0.272 Sum_probs=39.4
Q ss_pred CceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEE
Q psy2261 797 HGVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLI 848 (857)
Q Consensus 797 ~G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMv 848 (857)
.+.++.-...+ -.|-++.|+++|+..|+-|| -|.|+|++|+++|+..+
T Consensus 84 ~~~~iGaGTVl-t~~~a~~Ai~AGA~fIvsP~---~~~~vi~~~~~~gi~~i 131 (232)
T 4e38_A 84 PEMLIGAGTIL-NGEQALAAKEAGATFVVSPG---FNPNTVRACQEIGIDIV 131 (232)
T ss_dssp TTCEEEEECCC-SHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHHTCEEE
T ss_pred CCCEEeECCcC-CHHHHHHHHHcCCCEEEeCC---CCHHHHHHHHHcCCCEE
Confidence 34555545544 58999999999999999998 59999999999999864
No 18
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=54.86 E-value=11 Score=34.92 Aligned_cols=37 Identities=11% Similarity=0.151 Sum_probs=31.4
Q ss_pred CCCHhHHHHcCCeEEe-cCCCCCCcHHHHHHHHhCCcEEE
Q psy2261 810 RANIDRAVLSGAKFVS-APGGSNNDQSVIDAANYHKLTLI 848 (857)
Q Consensus 810 ~D~Vd~Aa~~GV~aIi-QPGGSiRD~EVI~Aane~gIaMv 848 (857)
.+-++.+.+.|+++|+ |||- .++|+.+.|.++||.++
T Consensus 72 ~~~v~e~~~~g~k~v~~~~G~--~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIFNPGT--ENEELEEILSENGIEPV 109 (122)
T ss_dssp GGGHHHHHHHCCSEEEECTTC--CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCEEEECCCC--ChHHHHHHHHHcCCeEE
Confidence 5788999999998764 6664 58999999999999987
No 19
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=49.02 E-value=15 Score=36.39 Aligned_cols=43 Identities=19% Similarity=0.237 Sum_probs=32.2
Q ss_pred CCCChHHHHHHHHHCCc-EEEEehhHHHHHHhC-CCCceecccccCC
Q psy2261 15 DKTGLLPFAKQLSGLGY-TLVASGGTAKALRDE-NIPVRDVADITGA 59 (857)
Q Consensus 15 DK~glvelAr~L~~lGf-eIiATgGTAk~L~e~-GI~v~~VskvTgf 59 (857)
+=+..++.|+.| +.|+ =|+|-|||+++|+++ +|||..| ++|||
T Consensus 37 ~l~~~v~~a~~~-~~~~dVIISRGgta~~lr~~~~iPVV~I-~~s~~ 81 (196)
T 2q5c_A 37 SLTRASKIAFGL-QDEVDAIISRGATSDYIKKSVSIPSISI-KVTRF 81 (196)
T ss_dssp CHHHHHHHHHHH-TTTCSEEEEEHHHHHHHHTTCSSCEEEE-CCCHH
T ss_pred CHHHHHHHHHHh-cCCCeEEEECChHHHHHHHhCCCCEEEE-cCCHh
Confidence 444567889999 8898 567779999999996 6666655 45555
No 20
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=47.94 E-value=7.8 Score=35.96 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=36.3
Q ss_pred HHHH-cCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcCCCCC
Q psy2261 815 RAVL-SGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHNTRLF 855 (857)
Q Consensus 815 ~Aa~-~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG~RhF 855 (857)
.|.+ .++.+||=.||--=++++++.|+++||+.+-|..-.|
T Consensus 68 ~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ipvl~t~~~T~ 109 (139)
T 2ioj_A 68 TALEMPNVRCLILTGNLEPVQLVLTKAEERGVPVILTGHDTL 109 (139)
T ss_dssp HHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCCEEECSSCHH
T ss_pred HHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCeEEEECCCHH
Confidence 5666 7999999999999999999999999999999876443
No 21
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=43.56 E-value=17 Score=37.06 Aligned_cols=50 Identities=18% Similarity=0.266 Sum_probs=40.6
Q ss_pred cCceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEE
Q psy2261 796 LHGVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIH 849 (857)
Q Consensus 796 l~G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvF 849 (857)
+....+.-+..+ =.|-++.|.++|+..|+-|+ -|.+++++|+++|+.++-
T Consensus 66 ~~~l~vgaGtvl-~~d~~~~A~~aGAd~v~~p~---~d~~v~~~ar~~g~~~i~ 115 (224)
T 1vhc_A 66 RPDFLIAAGTVL-TAEQVVLAKSSGADFVVTPG---LNPKIVKLCQDLNFPITP 115 (224)
T ss_dssp CTTCEEEEESCC-SHHHHHHHHHHTCSEEECSS---CCHHHHHHHHHTTCCEEC
T ss_pred CcCcEEeeCcEe-eHHHHHHHHHCCCCEEEECC---CCHHHHHHHHHhCCCEEe
Confidence 445566666655 56999999999999999986 589999999999988753
No 22
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=40.84 E-value=65 Score=31.07 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=64.0
Q ss_pred ccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCCCChh
Q psy2261 6 GKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSRNTDS 85 (857)
Q Consensus 6 ~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar~~~~ 85 (857)
.+++||+-...-==..+++.|.+.|++++.+.-...-+++. ..+. . +++. +-+= -.+++
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~-------~-~~~~-----~~~D--~~~~~ 65 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL------AKEC-------P-GIEP-----VCVD--LGDWD 65 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHHS-------T-TCEE-----EECC--TTCHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH------HHhc-------c-CCCc-----EEec--CCCHH
Confidence 35788887754334578999999999999886554443321 0000 0 1111 1011 12345
Q ss_pred hHHHHHhCCCCceeEEEEecC-----ChhhhccCCCCChhhhh--hccccchH-HHHHHHHhC------CCceEEEeCCc
Q psy2261 86 DQSDMKKMNYDMVSIVVCNLY-----PFSQTVAKPDCNIPTAV--ENIDIGGV-TLLRAAAKN------HERVTVICDPS 151 (857)
Q Consensus 86 h~~~l~~~~I~~IDlVVVNLY-----PFe~tv~~~~~~~~e~I--EnIDIGGp-smiRAAAKN------~~~V~Vv~dP~ 151 (857)
.++++-+ ...++|+||.|-= ||.+ .+.++.- -++.+-|+ .+++++.+. ..+++.+++..
T Consensus 66 ~~~~~~~-~~~~id~vi~~Ag~~~~~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~ 138 (244)
T 1cyd_A 66 ATEKALG-GIGPVDLLVNNAALVIMQPFLE------VTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMV 138 (244)
T ss_dssp HHHHHHT-TCCCCSEEEECCCCCCCBCGGG------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred HHHHHHH-HcCCCCEEEECCcccCCCCccc------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchh
Confidence 5555544 4568999998853 2221 2333322 23444554 445665542 45677777765
Q ss_pred cH
Q psy2261 152 DY 153 (857)
Q Consensus 152 DY 153 (857)
-|
T Consensus 139 ~~ 140 (244)
T 1cyd_A 139 AH 140 (244)
T ss_dssp GT
T ss_pred hc
Confidence 44
No 23
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=39.12 E-value=15 Score=37.08 Aligned_cols=48 Identities=21% Similarity=0.345 Sum_probs=37.7
Q ss_pred ceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEE
Q psy2261 798 GVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIH 849 (857)
Q Consensus 798 G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvF 849 (857)
...+.-+.++ =.|-++.|.++|+..|+-|+ -|.+++++|+++|+.++-
T Consensus 67 ~~~vgagtvi-~~d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i~ 114 (214)
T 1wbh_A 67 EAIVGAGTVL-NPQQLAEVTEAGAQFAISPG---LTEPLLKAATEGTIPLIP 114 (214)
T ss_dssp TSEEEEESCC-SHHHHHHHHHHTCSCEEESS---CCHHHHHHHHHSSSCEEE
T ss_pred CCEEeeCEEE-EHHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEE
Confidence 4444444432 34899999999999999885 589999999999988764
No 24
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=37.63 E-value=1.3e+02 Score=30.28 Aligned_cols=126 Identities=11% Similarity=0.070 Sum_probs=68.9
Q ss_pred CccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCC-CC
Q psy2261 5 NGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSR-NT 83 (857)
Q Consensus 5 ~~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar-~~ 83 (857)
..+++||+-...-==..+|+.|.+.|++++.+.-+..-+++. +.++ ++++..+ -.. .+
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~------~~~~-------~~~~~~~--------~~Dl~d 73 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAA------ARTM-------AGQVEVR--------ELDLQD 73 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HTTS-------SSEEEEE--------ECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH------HHHh-------cCCeeEE--------EcCCCC
Confidence 345788888764334678899999999999987766655541 1111 2333221 111 24
Q ss_pred hhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchH-HHHHHHHhCCC-ceEEEeCCccH
Q psy2261 84 DSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGV-TLLRAAAKNHE-RVTVICDPSDY 153 (857)
Q Consensus 84 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGp-smiRAAAKN~~-~V~Vv~dP~DY 153 (857)
++.++.+.+. +.+||+||.|-=.+......+.-.+++.+ ++..-|+ -|++++.+... +|+.+++..-|
T Consensus 74 ~~~v~~~~~~-~~~iD~lv~nAg~~~~~~~~~~~~~~~~~-~vN~~g~~~l~~~~~~~~~~riv~isS~~~~ 143 (291)
T 3rd5_A 74 LSSVRRFADG-VSGADVLINNAGIMAVPYALTVDGFESQI-GTNHLGHFALTNLLLPRLTDRVVTVSSMAHW 143 (291)
T ss_dssp HHHHHHHHHT-CCCEEEEEECCCCCSCCCCBCTTSCBHHH-HHHTHHHHHHHHHHGGGEEEEEEEECCGGGT
T ss_pred HHHHHHHHHh-cCCCCEEEECCcCCCCcccCCHHHHHHHH-HHHHHHHHHHHHHHHHHHHhheeEeechhhc
Confidence 5555555443 27899999986433211000011223333 3444454 56777776654 55555554443
No 25
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=36.53 E-value=29 Score=32.40 Aligned_cols=38 Identities=5% Similarity=0.008 Sum_probs=31.8
Q ss_pred CCCHhHHHHcCCeE-EecCCCCCCcHHHHHHHHhCCcEEEE
Q psy2261 810 RANIDRAVLSGAKF-VSAPGGSNNDQSVIDAANYHKLTLIH 849 (857)
Q Consensus 810 ~D~Vd~Aa~~GV~a-IiQPGGSiRD~EVI~Aane~gIaMvF 849 (857)
.+.++.+.+.|+++ ++|+|+. .+|+.+.|.++||.++-
T Consensus 84 ~~v~~~~~~~gi~~i~~~~g~~--~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 84 MDHLPEVLALRPGLVWLQSGIR--HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp TTTHHHHHHHCCSCEEECTTCC--CHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCcC--HHHHHHHHHHcCCEEEc
Confidence 57899999999976 5677664 79999999999998873
No 26
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=36.37 E-value=99 Score=30.85 Aligned_cols=40 Identities=18% Similarity=0.056 Sum_probs=29.1
Q ss_pred ccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHh
Q psy2261 6 GKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRD 45 (857)
Q Consensus 6 ~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e 45 (857)
.+++||+-...-==..+|+.|.+.|++++.+.-....+++
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~ 69 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA 69 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH
Confidence 4568887775433457899999999999998765555543
No 27
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans}
Probab=35.76 E-value=43 Score=36.06 Aligned_cols=74 Identities=23% Similarity=0.196 Sum_probs=49.8
Q ss_pred ccceeeeecCCCChhHHHHHHHhcC----CceeeecCchhcccchhHHHHhhh--ccccceEEEeeCCeEEeeccCCccc
Q psy2261 337 REVSDGIICPGITLGAREILEKKKG----GKYVILELPEFAIRDLTVATIALK--YTQSNSVVYAKNGQVIGIGAGQQSR 410 (857)
Q Consensus 337 ~~f~EViiAP~~~~~A~eiL~~kK~----~r~~~l~~~~~~~~dl~~a~~~~~--~~ksn~v~~~k~~~~vgiG~Gq~~R 410 (857)
..|+.||.||+|..++..+++.-.- =|.+.|..|+.+.++-.+...+.. ..+-|-+++..+.+ .|.|+..|
T Consensus 81 ~a~~~vi~a~d~~~G~~~lvq~yglg~l~PNTilLg~~~~~e~~~~y~~~i~~~~~~~~nVlil~~~~~---~~fg~~~~ 157 (294)
T 3g40_A 81 FSSWTIIDTAEFEENLVVGMEALTGSFFRPSILFLRLPENRDRDEEIREIIRKASMYRMGVLLFSKHPQ---AGLGRQNL 157 (294)
T ss_dssp EEEEEEC-----CHHHHHHHHHHTTCSSCSCEEEEECCSSGGGHHHHHHHHHHHHHTTCEEEEEECCTT---TTTTTSCE
T ss_pred eeEEEEEecCChhHHHHHHHHHcCCCCCCCCEEEeCCCCChhhhHHHHHHHHHHHHhCceEEEEecCCc---cCCCCCce
Confidence 4688999999999999999998764 356677788777776666655544 44666777765554 78888777
Q ss_pred hhh
Q psy2261 411 IHC 413 (857)
Q Consensus 411 v~~ 413 (857)
||-
T Consensus 158 Idv 160 (294)
T 3g40_A 158 INL 160 (294)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 28
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=34.39 E-value=50 Score=31.93 Aligned_cols=114 Identities=11% Similarity=0.079 Sum_probs=62.1
Q ss_pred CCCCCccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccC
Q psy2261 1 MEKNNGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILS 80 (857)
Q Consensus 1 ~~~~~~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILa 80 (857)
|-+...+++||+-...-==..+|+.|.+.|+.++.+.-... +-
T Consensus 1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------------------~D 43 (223)
T 3uce_A 1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------------------LD 43 (223)
T ss_dssp ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------------------CC
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------------------cC
Confidence 33444567888877543345788999999999988764322 11
Q ss_pred CCChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccc--c-chHHHHHHHHhCCC---ceEEEeCCcc
Q psy2261 81 RNTDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENID--I-GGVTLLRAAAKNHE---RVTVICDPSD 152 (857)
Q Consensus 81 r~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnID--I-GGpsmiRAAAKN~~---~V~Vv~dP~D 152 (857)
-.+++..+++-+. +.++|+||.|-=.+...-.-...+.++.-+.++ . |=.-++|++.+..+ +++.+++..-
T Consensus 44 ~~~~~~v~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~ 120 (223)
T 3uce_A 44 ISDEKSVYHYFET-IGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS 120 (223)
T ss_dssp TTCHHHHHHHHHH-HCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG
T ss_pred CCCHHHHHHHHHH-hCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh
Confidence 1234444444331 378999999865331100001345555544444 3 44456777776543 4666665443
No 29
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=34.01 E-value=84 Score=28.73 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=19.4
Q ss_pred CCChHHHHHHHHHCCcEE-EEehhH
Q psy2261 16 KTGLLPFAKQLSGLGYTL-VASGGT 39 (857)
Q Consensus 16 K~glvelAr~L~~lGfeI-iATgGT 39 (857)
-+++.++.+.|++.|+.+ +.|+++
T Consensus 29 ~~g~~~~l~~L~~~g~~~~i~Tn~~ 53 (179)
T 3l8h_A 29 LPGSLQAIARLTQADWTVVLATNQS 53 (179)
T ss_dssp CTTHHHHHHHHHHTTCEEEEEEECT
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCC
Confidence 368899999999999986 566654
No 30
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=33.74 E-value=20 Score=36.54 Aligned_cols=49 Identities=20% Similarity=0.377 Sum_probs=38.0
Q ss_pred CceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEE
Q psy2261 797 HGVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIH 849 (857)
Q Consensus 797 ~G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvF 849 (857)
.+..+..+..+ =.|-++.|.++|+..|+-|+ -|.+++++|+++|+.++-
T Consensus 76 ~~~~igagtvl-~~d~~~~A~~aGAd~v~~p~---~d~~v~~~~~~~g~~~i~ 124 (225)
T 1mxs_A 76 PELCVGAGTVL-DRSMFAAVEAAGAQFVVTPG---ITEDILEAGVDSEIPLLP 124 (225)
T ss_dssp TTSEEEEECCC-SHHHHHHHHHHTCSSEECSS---CCHHHHHHHHHCSSCEEC
T ss_pred cccEEeeCeEe-eHHHHHHHHHCCCCEEEeCC---CCHHHHHHHHHhCCCEEE
Confidence 34445445432 33899999999999999885 489999999999988763
No 31
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=32.73 E-value=30 Score=34.49 Aligned_cols=49 Identities=18% Similarity=0.270 Sum_probs=39.9
Q ss_pred CceEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEE
Q psy2261 797 HGVSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIH 849 (857)
Q Consensus 797 ~G~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvF 849 (857)
......-+.++ -.|-++.|.++|+..|.-|+ -|.+++++|+++|+.++.
T Consensus 61 ~~~~~gag~vl-~~d~~~~A~~~GAd~v~~~~---~d~~v~~~~~~~g~~~i~ 109 (207)
T 2yw3_A 61 SGLLLGAGTVR-SPKEAEAALEAGAAFLVSPG---LLEEVAALAQARGVPYLP 109 (207)
T ss_dssp SSCEEEEESCC-SHHHHHHHHHHTCSEEEESS---CCHHHHHHHHHHTCCEEE
T ss_pred CCCEEEeCeEe-eHHHHHHHHHcCCCEEEcCC---CCHHHHHHHHHhCCCEEe
Confidence 44555556655 56999999999999999885 579999999999988763
No 32
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=32.29 E-value=92 Score=30.36 Aligned_cols=126 Identities=20% Similarity=0.226 Sum_probs=66.2
Q ss_pred CccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHHhCCCCceecccccCCCcccCCcccccchhhhccccCC-CC
Q psy2261 5 NGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSR-NT 83 (857)
Q Consensus 5 ~~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar-~~ 83 (857)
..+++||+-...-==..+|+.|.+.|++++.+.-....|++. ..+ +..++.. +... .+
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~-------~~~~~~~--------~~~D~~~ 71 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSL------GNA-------LKDNYTI--------EVCNLAN 71 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHH-------HCSSEEE--------EECCTTS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHH------HHH-------hccCccE--------EEcCCCC
Confidence 345788887754434578999999999999988766665541 011 1112211 1111 23
Q ss_pred hhhHHHHHhCCCCceeEEEEecCChhhh-c-cCCCCChhhhhhccccchH-HHHHHHH-----hCCCceEEEeCCccH
Q psy2261 84 DSDQSDMKKMNYDMVSIVVCNLYPFSQT-V-AKPDCNIPTAVENIDIGGV-TLLRAAA-----KNHERVTVICDPSDY 153 (857)
Q Consensus 84 ~~h~~~l~~~~I~~IDlVVVNLYPFe~t-v-~~~~~~~~e~IEnIDIGGp-smiRAAA-----KN~~~V~Vv~dP~DY 153 (857)
++..+++-+. +.+||+||.|--..... . ..+..++++.++ +..-|+ .|+|++. +...+++.+++..-|
T Consensus 72 ~~~~~~~~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~-~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 147 (249)
T 3f9i_A 72 KEECSNLISK-TSNLDILVCNAGITSDTLAIRMKDQDFDKVID-INLKANFILNREAIKKMIQKRYGRIINISSIVGI 147 (249)
T ss_dssp HHHHHHHHHT-CSCCSEEEECCC-------------CHHHHHH-HHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC-
T ss_pred HHHHHHHHHh-cCCCCEEEECCCCCCCCccccCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhc
Confidence 4455554432 36899999886432211 0 001112333332 344454 4566664 455678888887665
No 33
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=32.03 E-value=41 Score=35.37 Aligned_cols=49 Identities=8% Similarity=0.009 Sum_probs=36.5
Q ss_pred cEEEEEec----CCCChHHHHHHHHHCCcE--EEEehhHHHHHHhCCCCceeccc
Q psy2261 7 KLVILSVS----DKTGLLPFAKQLSGLGYT--LVASGGTAKALRDENIPVRDVAD 55 (857)
Q Consensus 7 graLISVs----DK~glvelAr~L~~lGfe--IiATgGTAk~L~e~GI~v~~Vsk 55 (857)
.++|+... +=.-++.+|+.|.+.|++ +++|+.....++..|+++..+..
T Consensus 13 ~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~g~~~~~~~~ 67 (424)
T 2iya_A 13 RHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVVYDS 67 (424)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHTCEEEECCC
T ss_pred ceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhCCCEEEecCc
Confidence 35666433 456679999999999987 56667777888999998876654
No 34
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=30.99 E-value=47 Score=31.02 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=30.7
Q ss_pred CCCHhHHHHcCCeE-EecCCCCCCcHHHHHHHHhCCcEEE
Q psy2261 810 RANIDRAVLSGAKF-VSAPGGSNNDQSVIDAANYHKLTLI 848 (857)
Q Consensus 810 ~D~Vd~Aa~~GV~a-IiQPGGSiRD~EVI~Aane~gIaMv 848 (857)
.+.++.+.+.|+++ ++|+|.. .+|+.++|.++||.++
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g~~--~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYNTY--NREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTTCC--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEECCCch--HHHHHHHHHHcCCEEE
Confidence 46688899999976 5577654 8999999999999976
No 35
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=28.91 E-value=36 Score=33.44 Aligned_cols=53 Identities=17% Similarity=0.285 Sum_probs=45.3
Q ss_pred eEEeccccccCCCCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcCCCCC
Q psy2261 799 VSVASDAFFPFRANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHNTRLF 855 (857)
Q Consensus 799 ~VlaSDAFFPF~D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG~RhF 855 (857)
.|+..| =.|..+.+.+.|+.+++-.||.--++++++.|++.+++.+.|....|
T Consensus 123 ivIvgd----r~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~~~~~~i~t~~d~~ 175 (245)
T 3l2b_A 123 IAIAGD----RAEIQAELIELKVSLLIVTGGHTPSKEIIELAKKNNITVITTPHDSF 175 (245)
T ss_dssp EEEECS----CHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHHHTCEEEECSSCHH
T ss_pred EEEECC----CHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHHcCCeEEEeCCChH
Confidence 444555 36788999999999999999999999999999999999999986544
No 36
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=27.62 E-value=79 Score=33.58 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=0.0
Q ss_pred CCCChHHHHHHHHHCCcEEEEe-----------------------------------hhHHHHHHhCCCCceecccccCC
Q psy2261 15 DKTGLLPFAKQLSGLGYTLVAS-----------------------------------GGTAKALRDENIPVRDVADITGA 59 (857)
Q Consensus 15 DK~glvelAr~L~~lGfeIiAT-----------------------------------gGTAk~L~e~GI~v~~VskvTgf 59 (857)
|.+.++++++...++|++++=+ .-+...|+++|+.|..|. +|=
T Consensus 58 d~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~--vGN 135 (334)
T 1fob_A 58 DLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIIS--IGN 135 (334)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEE--ESS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEE--Eee
Q ss_pred CcccCCc-----------------------ccccc--hhhhccccCCCChhhH-------HHHHhCCCC---ceeEEEEe
Q psy2261 60 PEMLGGR-----------------------VKTLH--PAVHAGILSRNTDSDQ-------SDMKKMNYD---MVSIVVCN 104 (857)
Q Consensus 60 PEil~GR-----------------------VKTLH--PkIhgGILar~~~~h~-------~~l~~~~I~---~IDlVVVN 104 (857)
|+..|- ||..- |.+. -++....+.+. ..+.++|-. .+|+|-+|
T Consensus 136 -E~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~-v~~h~~~~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~s 213 (334)
T 1fob_A 136 -EIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPK-IMIHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGVS 213 (334)
T ss_dssp -SGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCE-EEEEESCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEEE
T ss_pred -cCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCe-EEEEcCCcCchHHHHHHHHHHHHcCCCCCCCcCEEEEe
Q ss_pred cCCh
Q psy2261 105 LYPF 108 (857)
Q Consensus 105 LYPF 108 (857)
+|||
T Consensus 214 yYp~ 217 (334)
T 1fob_A 214 YYPF 217 (334)
T ss_dssp CCSS
T ss_pred CCCC
No 37
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=27.30 E-value=54 Score=36.02 Aligned_cols=88 Identities=19% Similarity=0.266 Sum_probs=47.3
Q ss_pred CCCChHHHHHHHHHCCcEE--EEehhHHHHHHhC----------CCCceecccccCCCcccCCccc--ccchhhhccccC
Q psy2261 15 DKTGLLPFAKQLSGLGYTL--VASGGTAKALRDE----------NIPVRDVADITGAPEMLGGRVK--TLHPAVHAGILS 80 (857)
Q Consensus 15 DK~glvelAr~L~~lGfeI--iATgGTAk~L~e~----------GI~v~~VskvTgfPEil~GRVK--TLHPkIhgGILa 80 (857)
.=.-+++||+.|.+.|+++ +.|.-....+.+. ||.+..+.+ |+|+. ++... .-.+.....+.
T Consensus 21 Hi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~--~lp~~-~~~~~~~~~~~~~~~~~~- 96 (482)
T 2pq6_A 21 HINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPD--GLTPM-EGDGDVSQDVPTLCQSVR- 96 (482)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECC--CCC----------CCHHHHHHHHT-
T ss_pred hHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCC--CCCCc-ccccCcchhHHHHHHHHH-
Confidence 3455889999999999764 6777776666442 777777775 78872 21111 11122222221
Q ss_pred CCChhhHHHH-HhC----CCCceeEEEEecC
Q psy2261 81 RNTDSDQSDM-KKM----NYDMVSIVVCNLY 106 (857)
Q Consensus 81 r~~~~h~~~l-~~~----~I~~IDlVVVNLY 106 (857)
+..+..++++ +++ +-.++|+||+..+
T Consensus 97 ~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~ 127 (482)
T 2pq6_A 97 KNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 127 (482)
T ss_dssp TSSHHHHHHHHHHHHTCSSSCCCCEEEEETT
T ss_pred HHhhHHHHHHHHHHhhhccCCCceEEEECCc
Confidence 2233333333 221 1358999999864
No 38
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=27.28 E-value=29 Score=31.38 Aligned_cols=39 Identities=8% Similarity=0.080 Sum_probs=33.7
Q ss_pred CCCCHhHHHHcCCeEEecCCCCCCc-------------HHHHHHHHhCCcEE
Q psy2261 809 FRANIDRAVLSGAKFVSAPGGSNND-------------QSVIDAANYHKLTL 847 (857)
Q Consensus 809 F~D~Vd~Aa~~GV~aIiQPGGSiRD-------------~EVI~Aane~gIaM 847 (857)
+.+.+..+.+.|++-++-.|-+.+. .++++.++++++.+
T Consensus 29 ~~~~l~~l~~~Gi~~~iaTGR~~~~~nG~~~~~~~~~~~~i~~~~~~~~~~~ 80 (126)
T 1xpj_A 29 VIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVPY 80 (126)
T ss_dssp HHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhCCCeEEEEeCCChhhccccccccCHHHHHHHHHHHHHcCCCE
Confidence 5577888889999999999988877 79999999999864
No 39
>2isb_A Fumarase, FUM-1; NP_069927.1, fumarase of FUM-1, structural genomics, PSI-2, structure initiative, joint center for structural genomics; HET: MSE; 1.66A {Archaeoglobus fulgidus} SCOP: c.8.9.1
Probab=26.06 E-value=56 Score=33.26 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=28.8
Q ss_pred hHHHH-cCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcC
Q psy2261 814 DRAVL-SGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHN 851 (857)
Q Consensus 814 d~Aa~-~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG 851 (857)
+...+ .|++.+|--|| |.++|++||.+|++=+.++|
T Consensus 104 ~~ll~~~G~~~mIGKG~--r~~~v~~a~k~~avYl~avG 140 (192)
T 2isb_A 104 PKILEKVECMGIIGKGG--MSEEVVEAMRGKAAYFAFTG 140 (192)
T ss_dssp HHHHHHCSCEEEEEBSC--CCHHHHHHHTTTEEEEEECS
T ss_pred HHHHHhCCcEEEEECCC--CCHHHHHHHHhCeEEEEcCc
Confidence 34455 59999999998 89999999999955555554
No 40
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=25.54 E-value=23 Score=36.79 Aligned_cols=38 Identities=21% Similarity=0.497 Sum_probs=26.8
Q ss_pred CHHHHHhhHHHHHHhhhccccchhhcccCceecccCCccccchhccc
Q psy2261 623 PEFAIRDLTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRL 669 (857)
Q Consensus 623 ~~~~~~dl~fa~~v~k~~ksnaiv~ak~~~~vgigaGQ~sRv~~~r~ 669 (857)
++++++. ..|+++++|+| +||+||+|.|.+..+---++
T Consensus 3 ~qd~~K~-~aa~~A~~~V~--------~gmvvGlGTGSTv~~~i~~L 40 (228)
T 4gmk_A 3 NQDELKQ-LVGTKAVEWIK--------DGMIVGLGTGSTVKYMVDAL 40 (228)
T ss_dssp HHHHHHH-HHHHHHGGGCC--------TTCEEEECCSHHHHHHHHHH
T ss_pred CHHHHHH-HHHHHHHHhCC--------CCCEEEECchHHHHHHHHHH
Confidence 5555554 56888888875 56889999998776554443
No 41
>4gmk_A Ribose-5-phosphate isomerase A; D-ribose-5-phosphate isomerase family, ribose 5-phosphate isomerisation; 1.72A {Lactobacillus salivarius}
Probab=25.09 E-value=49 Score=34.35 Aligned_cols=33 Identities=24% Similarity=0.534 Sum_probs=23.8
Q ss_pred hHHHHHHhhccccceEEEeeCCeEEeecCCCCchhHHHHHH
Q psy2261 682 LTVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLA 722 (857)
Q Consensus 682 Ll~a~~~~k~vkSNsIv~akdg~tvGIGaGQ~sRV~~~riA 722 (857)
-..|+.++.|++ +|++||+|+|.+-.----+||
T Consensus 9 ~~aa~~A~~~V~--------~gmvvGlGTGSTv~~~i~~L~ 41 (228)
T 4gmk_A 9 QLVGTKAVEWIK--------DGMIVGLGTGSTVKYMVDALG 41 (228)
T ss_dssp HHHHHHHGGGCC--------TTCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--------CCCEEEECchHHHHHHHHHHH
Confidence 356778888875 578999999988764444444
No 42
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=24.50 E-value=2.6e+02 Score=27.18 Aligned_cols=33 Identities=12% Similarity=0.112 Sum_probs=24.1
Q ss_pred CccEEEEEecCCCChHHHHHHHHHCCcEEEEeh
Q psy2261 5 NGKLVILSVSDKTGLLPFAKQLSGLGYTLVASG 37 (857)
Q Consensus 5 ~~graLISVsDK~glvelAr~L~~lGfeIiATg 37 (857)
+.+++||+-...-==..+|+.|.+.|++++.+.
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 455788877654333578999999999998864
No 43
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=24.36 E-value=1.2e+02 Score=30.22 Aligned_cols=122 Identities=13% Similarity=0.045 Sum_probs=67.9
Q ss_pred CCCChHHHHHHHHHCC-----cEEEEeh-hHHHHHHhCCCCceeccc-cc--CCCccc---------CCcccccchhhhc
Q psy2261 15 DKTGLLPFAKQLSGLG-----YTLVASG-GTAKALRDENIPVRDVAD-IT--GAPEML---------GGRVKTLHPAVHA 76 (857)
Q Consensus 15 DK~glvelAr~L~~lG-----feIiATg-GTAk~L~e~GI~v~~Vsk-vT--gfPEil---------~GRVKTLHPkIhg 76 (857)
.+.++--|.+.|.+.| ..+++-| +|++.|+++|+++..+.+ .+ ++=+.+ ++|| |+|+
T Consensus 66 S~~aV~~~~~~l~~~~~~~~~~~i~aVG~~Ta~~L~~~G~~~~~~~~~~~~e~L~~~l~~~~~~~~~~~~v--L~~r--- 140 (254)
T 4es6_A 66 SKPAARLGLERLDRYWPQPPQQTWCSVGAATAAILEAYGLDVTYPEQGDDSEALLALPAFQDSLRVHDPKV--LIMR--- 140 (254)
T ss_dssp SHHHHHHHHHHHHHHCSSCCSCEEEESSHHHHHHHHHHTCCEECCSSCCSHHHHHTCHHHHHHTCSSSCEE--EEEE---
T ss_pred CHHHHHHHHHHHHHhCCCcccCEEEEECHHHHHHHHHcCCCcccCCCCCCHHHHHHhHhhcccccCCCCEE--EEEc---
Confidence 3445555666666543 5788885 899999999999887654 22 111111 1122 2221
Q ss_pred cccCCCChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHH
Q psy2261 77 GILSRNTDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKV 156 (857)
Q Consensus 77 GILar~~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v 156 (857)
|-.+ .+.-.+.|++.|+....++ .|- ++.. ..+.+++.+.+ ...--+++++++|+--..+
T Consensus 141 g~~~--r~~L~~~L~~~G~~v~~~~---vY~---~~~~-~~~~~~~~~~l-----------~~~~~d~v~ftS~s~v~~~ 200 (254)
T 4es6_A 141 GEGG--REFLAERLRGQGVQVDYLP---LYR---RRAP-DYPAGELLARV-----------RAERLNGLVVSSGQGLQNL 200 (254)
T ss_dssp CSSC--CCHHHHHHHHTTCEEEEEE---CEE---EECC-CCCTTHHHHHH-----------HHTTCCEEECCSHHHHHHH
T ss_pred CCcc--HHHHHHHHHHCCCEEEEEe---EEE---eeCC-CCCHHHHHHHH-----------HhCCCCEEEEcCHHHHHHH
Confidence 1111 3444567888887544333 442 3221 11222332222 2334578889999999988
Q ss_pred HHHHH
Q psy2261 157 IKDIE 161 (857)
Q Consensus 157 ~~el~ 161 (857)
++.+.
T Consensus 201 ~~~~~ 205 (254)
T 4es6_A 201 YQLAA 205 (254)
T ss_dssp HHHHG
T ss_pred HHHhh
Confidence 88774
No 44
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=24.15 E-value=59 Score=31.35 Aligned_cols=35 Identities=23% Similarity=0.335 Sum_probs=21.8
Q ss_pred CHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEE
Q psy2261 812 NIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIH 849 (857)
Q Consensus 812 ~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvF 849 (857)
-++.|.++|+.+|+.|+= +.++++.|.++|++++-
T Consensus 75 ~~~~a~~~Gad~iv~~~~---~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 75 QCRKAVESGAEFIVSPHL---DEEISQFCKEKGVFYMP 109 (205)
T ss_dssp HHHHHHHHTCSEEECSSC---CHHHHHHHHHHTCEEEC
T ss_pred HHHHHHHcCCCEEEcCCC---CHHHHHHHHHcCCcEEC
Confidence 456666677777766653 25666666666666543
No 45
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=24.13 E-value=2.2e+02 Score=30.73 Aligned_cols=111 Identities=13% Similarity=0.195 Sum_probs=67.2
Q ss_pred ccceEEEeeCCe---EEeecCCCC---chhHHHHHHHHhhhhhhhhhcCCcccccccccccccccchhhhhhccCCcCCC
Q psy2261 693 QSNSVVYAKNGQ---VIGIGAGQQ---SRIHCTRLAGDKVDNWYMRHHPNITSWKFRKGVKRAEKSNAIDNYILGTIGKD 766 (857)
Q Consensus 693 kSNsIv~akdg~---tvGIGaGQ~---sRV~~~riA~~KA~~~~lr~h~~v~~~~f~~~~~r~e~~n~i~~~~~~~~~~~ 766 (857)
.-+.++++-|.= .+|+|.|.. +|.+-.+-.+.+.- +|.++++=.-.|+-+ |.-+
T Consensus 41 ~gr~~Iva~DH~arg~lgv~~~p~~m~~~~~~l~~~~~~~~------~~Gvdavl~~~gi~~-------d~~L------- 100 (307)
T 3fok_A 41 DGKLFIVAADHPARGALAVGDNETAMANRYELLERMAIALS------RPGVDGVLGTPDIID-------DLAA------- 100 (307)
T ss_dssp TCCEEEEECCSGGGTCCCSSSSSSSSSCHHHHHHHHHHHHH------STTCCEEEECHHHHH-------HHHH-------
T ss_pred CCcEEEEECCCCccccCccCCCccccccHHHHHHHHHHHHh------ccCCCEEEECcchhh-------cccc-------
Confidence 357899998863 688988887 88888777666653 455555544333321 1111
Q ss_pred CchhhhhcccCCCCCCCCCHHHHHhhhhccCceE-Ee---cccc----ccCCC-----CHhHHHHcCCeEEe-----cCC
Q psy2261 767 MDTKTWESFFDGPPPEPMTEKEKADFIYTLHGVS-VA---SDAF----FPFRA-----NIDRAVLSGAKFVS-----APG 828 (857)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~t~~er~~~~~~l~G~V-la---SDAF----FPF~D-----~Vd~Aa~~GV~aIi-----QPG 828 (857)
+..|.|.+ ++ ..+. ||..| +||.|.+.|..++- -||
T Consensus 101 --------------------------i~~L~~~tv~gs~~~ggl~g~~~~~d~~~~~~sVe~AvrlGADaV~~l~~i~~G 154 (307)
T 3fok_A 101 --------------------------LGLLDDKIVVGSMNRGGLRGASFEMDDRYTGYNVSSMVDRGVDFAKTLVRINLS 154 (307)
T ss_dssp --------------------------TTCCTTCEEEEECCCCSCTTCTTTTSCCCCSCCHHHHHHHTCCEEEEEEEECTT
T ss_pred --------------------------eEEecCcccccccCccccccCCCCccccccccCHHHHHHCCCCEEEEEEEECCC
Confidence 11233332 22 2222 44433 89999999988854 676
Q ss_pred CCCCc------HHHHHHHHhCCcEEEE
Q psy2261 829 GSNND------QSVIDAANYHKLTLIH 849 (857)
Q Consensus 829 GSiRD------~EVI~Aane~gIaMvF 849 (857)
..--. .++++.|+++||+++.
T Consensus 155 s~~e~~~l~~la~vv~ea~~~GlP~~~ 181 (307)
T 3fok_A 155 DAGTAPTLEATAHAVNEAAAAQLPIML 181 (307)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 54332 2477899999987554
No 46
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=23.97 E-value=80 Score=29.54 Aligned_cols=36 Identities=19% Similarity=0.126 Sum_probs=28.9
Q ss_pred CCHhHHHHcCCeE-EecCCCCCCcHHHHHHHHhCCcEEE
Q psy2261 811 ANIDRAVLSGAKF-VSAPGGSNNDQSVIDAANYHKLTLI 848 (857)
Q Consensus 811 D~Vd~Aa~~GV~a-IiQPGGSiRD~EVI~Aane~gIaMv 848 (857)
+.++.+.+.|+++ ++|+|+. .+++.++|.++||.++
T Consensus 85 ~v~~~~~~~g~~~i~i~~~~~--~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 85 GVAQEAIAIGAKTLWLQLGVI--NEQAAVLAREAGLSVV 121 (145)
T ss_dssp HHHHHHHHHTCCEEECCTTCC--CHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHcCCCEEEEcCChH--HHHHHHHHHHcCCEEE
Confidence 4566677899886 4677544 8999999999999887
No 47
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=23.85 E-value=1e+02 Score=30.63 Aligned_cols=108 Identities=15% Similarity=0.146 Sum_probs=58.3
Q ss_pred CcEEEEeh-hHHHHHHhCCCCceecccccCCCcccCCcccccchhhhc-cccC-CC---ChhhHHHHHhCCCCceeEEEE
Q psy2261 30 GYTLVASG-GTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHA-GILS-RN---TDSDQSDMKKMNYDMVSIVVC 103 (857)
Q Consensus 30 GfeIiATg-GTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhg-GILa-r~---~~~h~~~l~~~~I~~IDlVVV 103 (857)
+..+++-| +|++.|++.|+.+..+-+- +-.|-| +..|-+.+-| -+|. |. .+.-.+.|+++|+.-..++|-
T Consensus 67 ~~~i~aVG~~Ta~aL~~~G~~~~~~p~~-~~~e~L---~~~l~~~~~~~~vL~~rg~~~~~~L~~~L~~~G~~v~~~~vY 142 (229)
T 3p9z_A 67 NIPAYALSEPTAKTLQDHHFKVAFMGEK-AHGKEF---VQEIFPLLEKKSVLYLRAKEIVSSLDTILLEHGIDFKQAVVY 142 (229)
T ss_dssp TSCEEESSHHHHHHHHHTTCCBCCCCC-------------CCHHHHTTCEEEEEEESSCSSCHHHHHHHTTCEEEEEEEE
T ss_pred CCcEEEECHHHHHHHHHcCCCeeecCCc-ccHHHH---HHHHHhhCCCCEEEEECCccchHHHHHHHHHCCCeEEEEEEE
Confidence 56888886 8999999999998766541 212211 1111111111 1232 21 244456788999865555544
Q ss_pred ecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHH
Q psy2261 104 NLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDI 160 (857)
Q Consensus 104 NLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el 160 (857)
.--|- + .+ .+.++.++ ...-+++++++|+--..+++.+
T Consensus 143 ~~~~~------~-~~-~~~~~~l~-----------~~~~d~v~ftS~s~v~~~~~~~ 180 (229)
T 3p9z_A 143 ENKLK------H-LT-LSEQNALK-----------PKEKSILIFTAISHAKAFLHYF 180 (229)
T ss_dssp EEEEC------C-CC-HHHHHHHS-----------CCTTCEEEECSHHHHHHHHHHS
T ss_pred EeeCC------C-cc-HHHHHHHh-----------cCCCeEEEEECHHHHHHHHHHh
Confidence 33321 1 11 12222222 2334788889999988887765
No 48
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.47 E-value=2e+02 Score=27.30 Aligned_cols=103 Identities=11% Similarity=0.039 Sum_probs=57.0
Q ss_pred cEEEEEecCCCChHHHHHHHH-HCCcEEEEehhHHH-HHHhCCCCceecccccCCCcccCCcccccchhhhccccCC-CC
Q psy2261 7 KLVILSVSDKTGLLPFAKQLS-GLGYTLVASGGTAK-ALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHAGILSR-NT 83 (857)
Q Consensus 7 graLISVsDK~glvelAr~L~-~lGfeIiATgGTAk-~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhgGILar-~~ 83 (857)
+++||.-...-==..+++.|. +.|++++++.-... .+++ +. -.++++.. +... .+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~----------~~----~~~~~~~~--------~~~D~~d 63 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP----------EI----IDHERVTV--------IEGSFQN 63 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH----------HH----HTSTTEEE--------EECCTTC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh----------hc----cCCCceEE--------EECCCCC
Confidence 348887764333356788888 89999988765433 2221 00 01111211 1111 13
Q ss_pred hhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhC-CCceEEEeCCccH
Q psy2261 84 DSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKN-HERVTVICDPSDY 153 (857)
Q Consensus 84 ~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN-~~~V~Vv~dP~DY 153 (857)
++.++++- ..+|+||.|.=+. |+| --.+++++.++ ..+++.+++..-|
T Consensus 64 ~~~~~~~~----~~~d~vv~~ag~~----------------n~~--~~~~~~~~~~~~~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 64 PGXLEQAV----TNAEVVFVGAMES----------------GSD--MASIVKALSRXNIRRVIGVSMAGLS 112 (221)
T ss_dssp HHHHHHHH----TTCSEEEESCCCC----------------HHH--HHHHHHHHHHTTCCEEEEEEETTTT
T ss_pred HHHHHHHH----cCCCEEEEcCCCC----------------Chh--HHHHHHHHHhcCCCeEEEEeeceec
Confidence 44444443 3679999887432 444 56677777665 4577777766544
No 49
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=22.94 E-value=74 Score=29.63 Aligned_cols=36 Identities=17% Similarity=0.155 Sum_probs=28.8
Q ss_pred CCHhHHHHcCCeEE-ecCCCCCCcHHHHHHHHhCCcEEE
Q psy2261 811 ANIDRAVLSGAKFV-SAPGGSNNDQSVIDAANYHKLTLI 848 (857)
Q Consensus 811 D~Vd~Aa~~GV~aI-iQPGGSiRD~EVI~Aane~gIaMv 848 (857)
+.++.+.+.|+++| +++|+ ..+|+.++|.++||.++
T Consensus 84 ~v~~~~~~~g~~~i~~~~~~--~~~~l~~~a~~~Gi~~i 120 (138)
T 1y81_A 84 QVAKEAVEAGFKKLWFQPGA--ESEEIRRFLEKAGVEYS 120 (138)
T ss_dssp HHHHHHHHTTCCEEEECTTS--CCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCCEEEEcCcc--HHHHHHHHHHHCCCEEE
Confidence 55667778899864 57765 38999999999999976
No 50
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.89 E-value=1.5e+02 Score=29.45 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=25.8
Q ss_pred ccEEEEEecCCCChHHHHHHHHHCCcEEEEehhH
Q psy2261 6 GKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGT 39 (857)
Q Consensus 6 ~graLISVsDK~glvelAr~L~~lGfeIiATgGT 39 (857)
.+++||+-...-==..+|+.|.+.|++++.+.-+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468888776433467899999999999988643
No 51
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.76 E-value=66 Score=32.85 Aligned_cols=129 Identities=13% Similarity=0.185 Sum_probs=68.1
Q ss_pred CChHHHHHHHHHC-Cc-EEEEehhHHHHHHhC-CCCceecccccCCCcccC--CcccccchhhhccccC-CCChhhHHHH
Q psy2261 17 TGLLPFAKQLSGL-GY-TLVASGGTAKALRDE-NIPVRDVADITGAPEMLG--GRVKTLHPAVHAGILS-RNTDSDQSDM 90 (857)
Q Consensus 17 ~glvelAr~L~~l-Gf-eIiATgGTAk~L~e~-GI~v~~VskvTgfPEil~--GRVKTLHPkIhgGILa-r~~~~h~~~l 90 (857)
+..++.|+.+.+. |+ =|+|-|||+++|+++ +|||..| ++||| .+|. =+.|....+| |+++ .+-....+.+
T Consensus 49 e~av~~a~~~~~~~~~dVIISRGgta~~Lr~~~~iPVV~I-~vs~~-Dil~aL~~a~~~~~kI--avVg~~~~~~~~~~i 124 (225)
T 2pju_A 49 EKAVTYIRKKLANERCDAIIAAGSNGAYLKSRLSVPVILI-KPSGY-DVLQFLAKAGKLTSSI--GVVTYQETIPALVAF 124 (225)
T ss_dssp HHHHHHHHHHTTTSCCSEEEEEHHHHHHHHTTCSSCEEEE-CCCHH-HHHHHHHHTTCTTSCE--EEEEESSCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEeCChHHHHHHhhCCCCEEEe-cCCHH-HHHHHHHHHHhhCCcE--EEEeCchhhhHHHHH
Confidence 3466777776554 57 567889999999996 6776655 45555 3332 1122222332 5555 3333334444
Q ss_pred HhCCCCceeEEEEecCChhhhccCCCCChhhhhhc-------cccchHHHHHHHHhCCCceEEEeCCccHHHHHHHHHc
Q psy2261 91 KKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVEN-------IDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDIEA 162 (857)
Q Consensus 91 ~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEn-------IDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el~~ 162 (857)
.+ +-.+|+.+.-+..-++. +++|+. +=|||....+.|.|.--+...|. + .+.+.+.|++
T Consensus 125 ~~--ll~~~i~~~~~~~~ee~--------~~~i~~l~~~G~~vVVG~~~~~~~A~~~Gl~~vlI~--s-~eSI~~Ai~e 190 (225)
T 2pju_A 125 QK--TFNLRLDQRSYITEEDA--------RGQINELKANGTEAVVGAGLITDLAEEAGMTGIFIY--S-AATVRQAFSD 190 (225)
T ss_dssp HH--HHTCCEEEEEESSHHHH--------HHHHHHHHHTTCCEEEESHHHHHHHHHTTSEEEESS--C-HHHHHHHHHH
T ss_pred HH--HhCCceEEEEeCCHHHH--------HHHHHHHHHCCCCEEECCHHHHHHHHHcCCcEEEEC--C-HHHHHHHHHH
Confidence 43 12334444333322221 222222 22677777777777655544444 2 4677776653
No 52
>3ixq_A Ribose-5-phosphate isomerase A; structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; HET: PGO; 1.78A {Methanocaldococcus jannaschii}
Probab=22.56 E-value=45 Score=34.49 Aligned_cols=32 Identities=34% Similarity=0.600 Sum_probs=23.6
Q ss_pred HHHHHHhhccccceEEEeeCCeEEeecCCCCchhHHHHHH
Q psy2261 683 TVATIALKYTQSNSVVYAKNGQVIGIGAGQQSRIHCTRLA 722 (857)
Q Consensus 683 l~a~~~~k~vkSNsIv~akdg~tvGIGaGQ~sRV~~~riA 722 (857)
..|+.+++|++ +|++||+|+|.+..----+||
T Consensus 9 ~aa~~A~~~V~--------~gmvvGlGTGSTv~~~I~~L~ 40 (226)
T 3ixq_A 9 KVAKEAVKLVK--------DGMVIGLGTGSTAALFIRELG 40 (226)
T ss_dssp HHHHHHGGGCC--------TTCEEEECCSHHHHHHHHHHH
T ss_pred HHHHHHHHhCC--------CCCEEEeCcHHHHHHHHHHHH
Confidence 46788888875 578999999988765444454
No 53
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=21.94 E-value=1.8e+02 Score=27.93 Aligned_cols=39 Identities=23% Similarity=0.187 Sum_probs=28.3
Q ss_pred ccEEEEEecCCCChHHHHHHHHHCCcEEEEehhHHHHHH
Q psy2261 6 GKLVILSVSDKTGLLPFAKQLSGLGYTLVASGGTAKALR 44 (857)
Q Consensus 6 ~graLISVsDK~glvelAr~L~~lGfeIiATgGTAk~L~ 44 (857)
.+++||+-...-==..+++.|.+.|++++.+.-...-++
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~ 45 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLD 45 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 356888877544445788999999999998865554443
No 54
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=21.31 E-value=1.3e+02 Score=29.82 Aligned_cols=120 Identities=13% Similarity=0.125 Sum_probs=67.1
Q ss_pred CCChHHHHHHHHHC---------CcEEEEeh-hHHHHHHhCCCCceecccccCCCcccCCcccccchhhhc-cccC-CC-
Q psy2261 16 KTGLLPFAKQLSGL---------GYTLVASG-GTAKALRDENIPVRDVADITGAPEMLGGRVKTLHPAVHA-GILS-RN- 82 (857)
Q Consensus 16 K~glvelAr~L~~l---------GfeIiATg-GTAk~L~e~GI~v~~VskvTgfPEil~GRVKTLHPkIhg-GILa-r~- 82 (857)
+.++.-|.+.|.+. +..+++-| +|++.|++.|+.+..+. .+-.|-| ++.|.+ .. -||- |.
T Consensus 68 ~~aV~~~~~~l~~~~~~~~~~l~~~~i~avG~~Ta~~l~~~G~~~~~~p--~~~~e~L---~~~l~~--g~~~vL~~r~~ 140 (261)
T 1wcw_A 68 GVGVRDLLEAGKALGLDLEGPLAKAFRLARGAKAARALKEAGLPPHAVG--DGTSKSL---LPLLPQ--GRGVAALQLYG 140 (261)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHSEEEESSHHHHHHHHHTTCCCSEEC--SSSHHHH---GGGSCC--CCEEEEEECCS
T ss_pred HHHHHHHHHHHHHhCchHHHHhcCCeEEEECHHHHHHHHHcCCCCCccc--CccHHHH---HHHHHc--CCceEEEEccC
Confidence 44455555555543 35688864 89999999999876665 2222222 333333 22 2444 32
Q ss_pred --ChhhHHHHHhCCCCceeEEEEecCChhhhccCCCCChhhhhhccccchHHHHHHHHhCCCceEEEeCCccHHHHHHHH
Q psy2261 83 --TDSDQSDMKKMNYDMVSIVVCNLYPFSQTVAKPDCNIPTAVENIDIGGVTLLRAAAKNHERVTVICDPSDYAKVIKDI 160 (857)
Q Consensus 83 --~~~h~~~l~~~~I~~IDlVVVNLYPFe~tv~~~~~~~~e~IEnIDIGGpsmiRAAAKN~~~V~Vv~dP~DY~~v~~el 160 (857)
.+.-.+.|++.|+ ++..+-+|- ++.. ....+++ ++.-...--+++++++|+--..+++.+
T Consensus 141 ~~~~~L~~~L~~~G~---~v~~~~~Y~---~~~~-~~~~~~~-----------~~~l~~~~~d~v~ftS~~~v~~~~~~~ 202 (261)
T 1wcw_A 141 KPLPLLENALAERGY---RVLPLMPYR---HLPD-PEGILRL-----------EEALLRGEVDALAFVAAIQVEFLFEGA 202 (261)
T ss_dssp SCCHHHHHHHHHTTE---EEEEECSEE---EEEC-HHHHHHH-----------HHHHHHTCCSEEEECSHHHHHHHHHHC
T ss_pred cccHHHHHHHHHCCC---EEEEEeeEE---EecC-CccHHHH-----------HHHHHcCCCCEEEEECHHHHHHHHHHH
Confidence 3445577888885 455555553 2211 0001222 222223345788899999988887765
No 55
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=20.90 E-value=89 Score=32.72 Aligned_cols=49 Identities=16% Similarity=0.076 Sum_probs=36.4
Q ss_pred CCCccEEEEEecCCCChHHHHHHHHHCCcEEEEehh-----HHHHHHhCCCCce
Q psy2261 3 KNNGKLVILSVSDKTGLLPFAKQLSGLGYTLVASGG-----TAKALRDENIPVR 51 (857)
Q Consensus 3 ~~~~graLISVsDK~glvelAr~L~~lGfeIiATgG-----TAk~L~e~GI~v~ 51 (857)
+|.++++++---=..|+-.+|+.|.++|+++..+.. +.+.|++.||++.
T Consensus 1 ~~~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~~~~~L~~~gi~v~ 54 (326)
T 3eag_A 1 SNAMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPPMSTQLEALGIDVY 54 (326)
T ss_dssp --CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHTTCEEE
T ss_pred CCCCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcHHHHHHHhCCCEEE
Confidence 466677765555678888899999999999998754 4567888888754
No 56
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=20.77 E-value=77 Score=33.35 Aligned_cols=43 Identities=12% Similarity=0.102 Sum_probs=31.9
Q ss_pred ccCCC--CHhHHHHc---CCeEEe-----cCCCCCCc-----HHHHHHHHhCCcEEEE
Q psy2261 807 FPFRA--NIDRAVLS---GAKFVS-----APGGSNND-----QSVIDAANYHKLTLIH 849 (857)
Q Consensus 807 FPF~D--~Vd~Aa~~---GV~aIi-----QPGGSiRD-----~EVI~Aane~gIaMvF 849 (857)
+||.| .++.+.+. .+++|+ .+||.+-+ +++.+.|++||+-+|+
T Consensus 181 ~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~ 238 (427)
T 3fq8_A 181 TPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVF 238 (427)
T ss_dssp EETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEE
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 46654 56666665 456665 66888877 7899999999999885
No 57
>1knx_A Probable HPR(Ser) kinase/phosphatase; HPR kinase, HPR kinase/phosphatase, HPRK/P, P-loop, walker A BOX, catabolite repression; 2.50A {Mycoplasma pneumoniae} SCOP: c.98.2.1 c.91.1.2
Probab=20.27 E-value=76 Score=34.09 Aligned_cols=45 Identities=0% Similarity=-0.026 Sum_probs=39.2
Q ss_pred CCHhHHHHcCCeEEecCCCCCCcHHHHHHHHhCCcEEEEcCCCCC
Q psy2261 811 ANIDRAVLSGAKFVSAPGGSNNDQSVIDAANYHKLTLIHHNTRLF 855 (857)
Q Consensus 811 D~Vd~Aa~~GV~aIiQPGGSiRD~EVI~Aane~gIaMvFTG~RhF 855 (857)
..++.....++.+||=--|---++|.|++|+++||+++-|....|
T Consensus 74 ~~~~~l~~~~iP~IIvtrg~~pp~elie~A~e~~ipLl~T~~~t~ 118 (312)
T 1knx_A 74 QILHNLLKLNPPAIILTKSFTDPTVLLQVNQTYQVPILKTDFFST 118 (312)
T ss_dssp TTHHHHHTTCCSCEEEETTTCCCHHHHHHGGGTCCCEEEESSCGG
T ss_pred HHHHHHhCCCCCEEEEECCCCCCHHHHHHHHHcCCEEEEeCccHH
Confidence 457778888999999988888899999999999999999987655
No 58
>2w4l_A DCMP deaminse, deoxycytidylate deaminase; pyrimidine metabolism, nucleotide biosynthesis, zinc, hexamer, hydrolase, metal-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=20.22 E-value=1.2e+02 Score=29.92 Aligned_cols=17 Identities=18% Similarity=0.517 Sum_probs=12.8
Q ss_pred eEEEeeCCeEEeecCCC
Q psy2261 696 SVVYAKNGQVIGIGAGQ 712 (857)
Q Consensus 696 sIv~akdg~tvGIGaGQ 712 (857)
||++-+||++||.|.-+
T Consensus 36 AvIV~~dg~Iia~G~N~ 52 (178)
T 2w4l_A 36 ACIVNSENKIVGIGYNG 52 (178)
T ss_dssp EEEECTTSCEEEEEESB
T ss_pred EEEEecCCEEEEEEECC
Confidence 55555899999998644
No 59
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=20.13 E-value=1.6e+02 Score=27.57 Aligned_cols=37 Identities=19% Similarity=0.441 Sum_probs=27.9
Q ss_pred CCChHHHHHHHHHCCcEEE-Eehh-------------------HHHHHHhCCCCcee
Q psy2261 16 KTGLLPFAKQLSGLGYTLV-ASGG-------------------TAKALRDENIPVRD 52 (857)
Q Consensus 16 K~glvelAr~L~~lGfeIi-ATgG-------------------TAk~L~e~GI~v~~ 52 (857)
.+++.++.+.|.+.|+.+. .|.+ ....|+..|+.+..
T Consensus 44 ~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ 100 (176)
T 2fpr_A 44 EPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDE 100 (176)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCCeeE
Confidence 4689999999999999864 5554 33678888988433
Done!