Your job contains 1 sequence.
>psy2262
MLNLVIDASLSDILPVWVREKTKTLWDMHMKGPHYKKRPPRQPLLGKPFAKGVVLKVLIK
KPKKPNSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRG
VYDLPHVVKKTQLTPGK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2262
(137 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0003714 - symbol:tko "technical knockout" species:... 397 6.3e-37 1
MGI|MGI:1346333 - symbol:Mrps12 "mitochondrial ribosomal ... 277 3.3e-24 1
ZFIN|ZDB-GENE-091204-48 - symbol:si:dkey-17e16.10 "si:dke... 276 4.2e-24 1
UNIPROTKB|O15235 - symbol:MRPS12 "28S ribosomal protein S... 270 1.8e-23 1
UNIPROTKB|Q29RU1 - symbol:MRPS12 "28S ribosomal protein S... 267 3.8e-23 1
RGD|1306221 - symbol:Mrps12 "mitochondrial ribosomal prot... 265 6.1e-23 1
UNIPROTKB|E2RE10 - symbol:MRPS12 "Uncharacterized protein... 263 1.0e-22 1
UNIPROTKB|H9L236 - symbol:MRPS12 "Uncharacterized protein... 259 2.6e-22 1
TIGR_CMR|NSE_0689 - symbol:NSE_0689 "ribosomal protein S1... 202 2.9e-16 1
TIGR_CMR|CJE_0540 - symbol:CJE_0540 "ribosomal protein S1... 200 4.7e-16 1
CGD|CAL0001528 - symbol:orf19.2438 species:5476 "Candida ... 194 2.0e-15 1
TIGR_CMR|SPO_3501 - symbol:SPO_3501 "ribosomal protein S1... 192 3.3e-15 1
TIGR_CMR|BA_0105 - symbol:BA_0105 "ribosomal protein S12"... 191 4.2e-15 1
UNIPROTKB|P0C460 - symbol:rps12-A "30S ribosomal protein ... 190 5.4e-15 1
UNIPROTKB|P0C461 - symbol:rps12-A "30S ribosomal protein ... 190 5.4e-15 1
UNIPROTKB|P12149 - symbol:rps12-A "30S ribosomal protein ... 190 5.4e-15 1
UNIPROTKB|Q6ENC0 - symbol:rps12 "30S ribosomal protein S1... 190 5.4e-15 1
UNIPROTKB|P41196 - symbol:rpsL "30S ribosomal protein S12... 188 8.8e-15 1
TIGR_CMR|DET_0470 - symbol:DET_0470 "ribosomal protein S1... 188 8.8e-15 1
POMBASE|SPAC4F8.06 - symbol:SPAC4F8.06 "mitochondrial rib... 188 8.8e-15 1
WB|WBGene00011391 - symbol:mrps-12 species:6239 "Caenorha... 188 8.8e-15 1
TIGR_CMR|APH_1035 - symbol:APH_1035 "ribosomal protein S1... 185 1.8e-14 1
TIGR_CMR|SO_0226 - symbol:SO_0226 "ribosomal protein S12"... 185 1.8e-14 1
ASPGD|ASPL0000075253 - symbol:AN4730 species:162425 "Emer... 184 2.3e-14 1
TIGR_CMR|CPS_4767 - symbol:CPS_4767 "ribosomal protein S1... 182 3.8e-14 1
UNIPROTKB|P0A7S3 - symbol:rpsL species:83333 "Escherichia... 181 4.9e-14 1
UNIPROTKB|Q9KUZ9 - symbol:rpsL "30S ribosomal protein S12... 181 4.9e-14 1
TIGR_CMR|CBU_0233 - symbol:CBU_0233 "ribosomal protein S1... 181 4.9e-14 1
TIGR_CMR|VC_0359 - symbol:VC_0359 "ribosomal protein S12"... 181 4.9e-14 1
TIGR_CMR|CHY_2315 - symbol:CHY_2315 "ribosomal protein S1... 180 6.2e-14 1
TIGR_CMR|ECH_0963 - symbol:ECH_0963 "ribosomal protein S1... 180 6.2e-14 1
SGD|S000005319 - symbol:MRPS12 "Mitochondrial protein" sp... 177 1.3e-13 1
UNIPROTKB|P28520 - symbol:RPS12 "Ribosomal protein S12, m... 175 2.1e-13 1
UNIPROTKB|Q2F983 - symbol:rps12 "Ribosomal protein S12" s... 175 2.1e-13 1
UNIPROTKB|Q7JAI8 - symbol:rps12 "Ribosomal protein S12" s... 175 2.1e-13 1
DICTYBASE|DDB_G0294074 - symbol:mrps12 "ribosomal protein... 133 5.9e-09 1
GENEDB_PFALCIPARUM|PFC0290w - symbol:PFC0290w "40S riboso... 124 5.3e-08 1
DICTYBASE|DDB_G0272250 - symbol:rps23 "40S ribosomal prot... 106 4.3e-06 1
WB|WBGene00004492 - symbol:rps-23 species:6239 "Caenorhab... 104 7.0e-06 1
FB|FBgn0033912 - symbol:RpS23 "Ribosomal protein S23" spe... 103 9.0e-06 1
ASPGD|ASPL0000058023 - symbol:AN1345 species:162425 "Emer... 99 2.4e-05 1
UNIPROTKB|F1NDC2 - symbol:RPS23 "Uncharacterized protein"... 99 2.4e-05 1
UNIPROTKB|E1BEQ3 - symbol:E1BEQ3 "Uncharacterized protein... 99 2.4e-05 1
UNIPROTKB|G3X7D5 - symbol:LOC787803 "Uncharacterized prot... 99 2.4e-05 1
UNIPROTKB|Q3T199 - symbol:RPS23 "40S ribosomal protein S2... 99 2.4e-05 1
UNIPROTKB|J9NZX6 - symbol:RPS23 "Uncharacterized protein"... 99 2.4e-05 1
UNIPROTKB|P62266 - symbol:RPS23 "40S ribosomal protein S2... 99 2.4e-05 1
UNIPROTKB|F2Z512 - symbol:RPS23 "40S ribosomal protein S2... 99 2.4e-05 1
UNIPROTKB|Q6SA96 - symbol:RPS23 "40S ribosomal protein S2... 99 2.4e-05 1
MGI|MGI:1913725 - symbol:Rps23 "ribosomal protein S23" sp... 99 2.4e-05 1
RGD|621039 - symbol:Rps23 "ribosomal protein S23" species... 99 2.4e-05 1
ZFIN|ZDB-GENE-080220-50 - symbol:rps23 "ribosomal protein... 99 2.4e-05 1
UNIPROTKB|D6RD47 - symbol:RPS23 "40S ribosomal protein S2... 98 3.0e-05 1
POMBASE|SPAC23C11.02c - symbol:rps23 "40S ribosomal prote... 97 3.9e-05 1
POMBASE|SPBP4H10.13 - symbol:rps2302 "40S ribosomal prote... 97 3.9e-05 1
RGD|1563570 - symbol:RGD1563570 "similar to ribosomal pro... 97 3.9e-05 1
UNIPROTKB|I3LMI4 - symbol:LOC100523526 "Uncharacterized p... 96 5.0e-05 1
TAIR|locus:2151301 - symbol:AT5G02960 species:3702 "Arabi... 96 5.0e-05 1
CGD|CAL0000513 - symbol:RPS23A species:5476 "Candida albi... 95 6.3e-05 1
SGD|S000003350 - symbol:RPS23A "Ribosomal protein 28 (rp2... 95 6.3e-05 1
SGD|S000006336 - symbol:RPS23B "Ribosomal protein 28 (rp2... 95 6.3e-05 1
TAIR|locus:2074954 - symbol:AT3G09680 species:3702 "Arabi... 94 8.1e-05 1
UNIPROTKB|E1B8G4 - symbol:E1B8G4 "Uncharacterized protein... 88 0.00065 1
>FB|FBgn0003714 [details] [associations]
symbol:tko "technical knockout" species:7227 "Drosophila
melanogaster" [GO:0007638 "mechanosensory behavior" evidence=IMP]
[GO:0009612 "response to mechanical stimulus" evidence=IMP]
[GO:0006412 "translation" evidence=ISS] [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0008049 "male courtship
behavior" evidence=IMP] [GO:0007619 "courtship behavior"
evidence=TAS] [GO:0001666 "response to hypoxia" evidence=IDA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
EMBL:AE014298 GO:GO:0001666 GO:GO:0007605 GO:GO:0003735
GO:GO:0008049 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0005763 GO:GO:0007638 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
eggNOG:COG0048 GeneTree:ENSGT00550000075103 OMA:LNQMHRQ EMBL:M19494
EMBL:AJ250320 EMBL:AL133505 EMBL:BT015958 PIR:A29622
RefSeq:NP_001245490.1 RefSeq:NP_525050.1 UniGene:Dm.1694
ProteinModelPortal:P10735 SMR:P10735 DIP:DIP-22123N
MINT:MINT-760161 STRING:P10735 PaxDb:P10735 PRIDE:P10735
EnsemblMetazoa:FBtr0070459 GeneID:31228 KEGG:dme:Dmel_CG7925
CTD:31228 FlyBase:FBgn0003714 InParanoid:P10735 OrthoDB:EOG4PC88F
PhylomeDB:P10735 GenomeRNAi:31228 NextBio:772558 Bgee:P10735
GermOnline:CG7925 Uniprot:P10735
Length = 140
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 77/109 (70%), Positives = 84/109 (77%)
Query: 24 TLWDMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRLSTGKEM 83
+L MH GPH K RPPRQPL GKPFA NSANRKCVLVRLSTGKEM
Sbjct: 32 SLQQMHRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLSTGKEM 91
Query: 84 VAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKKTQ 132
VAYIPG GHNLQEHNIVLC+VGR++D+PGVK+K VRGVYDL HVVKK+Q
Sbjct: 92 VAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVVKKSQ 140
>MGI|MGI:1346333 [details] [associations]
symbol:Mrps12 "mitochondrial ribosomal protein S12"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR005679
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
PROSITE:PS00055 MGI:MGI:1346333 GO:GO:0005739 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
HOGENOM:HOG000040063 CTD:6183 GeneTree:ENSGT00550000075103
HOVERGEN:HBG001525 OMA:LNQMHRQ OrthoDB:EOG4MGS8W EMBL:Y11682
EMBL:BC012679 EMBL:BC027522 IPI:IPI00132932 RefSeq:NP_036015.1
UniGene:Mm.358650 ProteinModelPortal:O35680 SMR:O35680
STRING:O35680 PhosphoSite:O35680 PaxDb:O35680 PRIDE:O35680
Ensembl:ENSMUST00000056078 Ensembl:ENSMUST00000171183 GeneID:24030
KEGG:mmu:24030 UCSC:uc009fzo.1 InParanoid:O35680 NextBio:303963
Bgee:O35680 CleanEx:MM_MRPS12 Genevestigator:O35680
GermOnline:ENSMUSG00000045948 Uniprot:O35680
Length = 139
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 59/117 (50%), Positives = 70/117 (59%)
Query: 16 VWVREKTKTLWDMHMKGPHYKKRPPRQ--PLLGKPFAXXXXXXXXXXXXXXXNSANRKCV 73
+W TL MH GP +K PP++ P G+P NSANRKC
Sbjct: 24 LWAARSMATLNQMHRLGP--RKEPPKRLGPTEGRPQLKGVVLRTFIRKPKKPNSANRKCC 81
Query: 74 LVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 130
VRLSTGKE V +IPGEGH LQEH++VL + GR +DLPGVK+K VRG YD HV KK
Sbjct: 82 RVRLSTGKEAVCFIPGEGHTLQEHHVVLVEGGRTQDLPGVKLKVVRGKYDCGHVQKK 138
>ZFIN|ZDB-GENE-091204-48 [details] [associations]
symbol:si:dkey-17e16.10 "si:dkey-17e16.10"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
ZFIN:ZDB-GENE-091204-48 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 GeneTree:ENSGT00550000075103
EMBL:CR388166 IPI:IPI00995277 RefSeq:XP_003200900.1
Ensembl:ENSDART00000122505 Ensembl:ENSDART00000144917
GeneID:100537619 KEGG:dre:100537619 Uniprot:E7F8G8
Length = 143
Score = 276 (102.2 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 67/138 (48%), Positives = 79/138 (57%)
Query: 1 MLNLVIDASLSDIL---PVWVREKTKTLWDMHMKGPHYKKRPPRQPL---LGKPFAXXXX 54
ML+ + AS S L P++ R TL MH KG K PPR+ + G P
Sbjct: 10 MLSSALQASRSVSLWSAPLFSRTMA-TLNQMHRKG---KPPPPRRKISATFGHPQLKAVV 65
Query: 55 XXXXXXXXXXXNSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVK 114
NSANRKC VRLS G+E V YIPGEGHNLQEHN+VL + GR +DLPGVK
Sbjct: 66 LKTMIRKPKKPNSANRKCAQVRLSNGQEAVVYIPGEGHNLQEHNVVLVQGGRTQDLPGVK 125
Query: 115 IKCVRGVYDLPHVVKKTQ 132
+ +RG YD HVVKK Q
Sbjct: 126 LAVIRGKYDCAHVVKKKQ 143
>UNIPROTKB|O15235 [details] [associations]
symbol:MRPS12 "28S ribosomal protein S12, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005761
"mitochondrial ribosome" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0006412 EMBL:CH471126 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005761 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
HOGENOM:HOG000040063 CTD:6183 HOVERGEN:HBG001525 OMA:LNQMHRQ
OrthoDB:EOG4MGS8W EMBL:Y11681 EMBL:AF058761 EMBL:CR407609
EMBL:BC001617 EMBL:BC006424 EMBL:BC007499 IPI:IPI00005692
RefSeq:NP_066930.1 RefSeq:NP_203526.1 RefSeq:NP_203527.1
UniGene:Hs.411125 ProteinModelPortal:O15235 SMR:O15235
IntAct:O15235 MINT:MINT-1373561 STRING:O15235 PhosphoSite:O15235
PaxDb:O15235 PeptideAtlas:O15235 PRIDE:O15235 DNASU:6183
Ensembl:ENST00000308018 Ensembl:ENST00000402029
Ensembl:ENST00000407800 GeneID:6183 KEGG:hsa:6183 UCSC:uc002okc.3
GeneCards:GC19P039422 HGNC:HGNC:10380 HPA:HPA046775 HPA:HPA050633
MIM:603021 neXtProt:NX_O15235 PharmGKB:PA30996 InParanoid:O15235
PhylomeDB:O15235 GenomeRNAi:6183 NextBio:24009 Bgee:O15235
CleanEx:HS_MRPS12 Genevestigator:O15235 GermOnline:ENSG00000128626
Uniprot:O15235
Length = 138
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 61/121 (50%), Positives = 71/121 (58%)
Query: 13 ILP-VWVREKTKTLWDMHMKGPHYKKRPPRQ--PLLGKPFAXXXXXXXXXXXXXXXNSAN 69
++P +W TL MH GP KRPPR+ P G+P NSAN
Sbjct: 20 LVPRLWATCSMATLNQMHRLGP--PKRPPRKLGPTEGRPQLKGVVLCTFTRKPKKPNSAN 77
Query: 70 RKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVK 129
RKC VRLSTG+E V +IPGEGH LQEH IVL + GR +DLPGVK+ VRG YD HV K
Sbjct: 78 RKCCRVRLSTGREAVCFIPGEGHTLQEHQIVLVEGGRTQDLPGVKLTVVRGKYDCGHVQK 137
Query: 130 K 130
K
Sbjct: 138 K 138
>UNIPROTKB|Q29RU1 [details] [associations]
symbol:MRPS12 "28S ribosomal protein S12, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 HOGENOM:HOG000040063
EMBL:BC114019 IPI:IPI00697120 RefSeq:NP_001070569.1
UniGene:Bt.59090 STRING:Q29RU1 PRIDE:Q29RU1
Ensembl:ENSBTAT00000002335 GeneID:768042 KEGG:bta:768042 CTD:6183
GeneTree:ENSGT00550000075103 HOVERGEN:HBG001525 InParanoid:Q29RU1
OMA:LNQMHRQ OrthoDB:EOG4MGS8W NextBio:20918397 Uniprot:Q29RU1
Length = 139
Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
Identities = 58/116 (50%), Positives = 69/116 (59%)
Query: 17 WVREKTKTLWDMHMKGPHYKKRPPRQP--LLGKPFAXXXXXXXXXXXXXXXNSANRKCVL 74
W TL +H +GP K PP +P G+P NSANRKC
Sbjct: 25 WGTRPMATLNQLHRRGP--PKFPPSKPGPTEGRPQLKGVVLRTFIRKPKKPNSANRKCCR 82
Query: 75 VRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 130
VRLSTG+E V +IPGEGHNLQEH++VL + GR +DLPGVK+K VRG YD HV KK
Sbjct: 83 VRLSTGREAVCFIPGEGHNLQEHHVVLVQGGRTQDLPGVKLKVVRGKYDCGHVQKK 138
>RGD|1306221 [details] [associations]
symbol:Mrps12 "mitochondrial ribosomal protein S12"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 RGD:1306221
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473979 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 CTD:6183
GeneTree:ENSGT00550000075103 OMA:LNQMHRQ OrthoDB:EOG4MGS8W
IPI:IPI00197829 RefSeq:NP_001099709.1 UniGene:Rn.8526
Ensembl:ENSRNOT00000027029 GeneID:292758 KEGG:rno:292758
NextBio:634698 Uniprot:D3ZQX3
Length = 139
Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
Identities = 58/117 (49%), Positives = 68/117 (58%)
Query: 16 VWVREKTKTLWDMHMKGPHYKKRPPRQ--PLLGKPFAXXXXXXXXXXXXXXXNSANRKCV 73
+W TL MH G K PP++ P G+P NSANRKC
Sbjct: 24 LWATRSMATLNQMHRLGR--PKEPPKRLGPTEGRPQLKGVVLRTFIRKPKKPNSANRKCC 81
Query: 74 LVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 130
VRLSTGKE V +IPGEGH LQEH++VL + GR +DLPGVK+K VRG YD HV KK
Sbjct: 82 RVRLSTGKEAVCFIPGEGHTLQEHHVVLVEGGRTQDLPGVKLKVVRGKYDCGHVQKK 138
>UNIPROTKB|E2RE10 [details] [associations]
symbol:MRPS12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 CTD:6183 GeneTree:ENSGT00550000075103
OMA:LNQMHRQ EMBL:AAEX03000966 RefSeq:XP_541631.3
ProteinModelPortal:E2RE10 Ensembl:ENSCAFT00000009045 GeneID:484517
KEGG:cfa:484517 NextBio:20858647 Uniprot:E2RE10
Length = 139
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 56/116 (48%), Positives = 68/116 (58%)
Query: 16 VWVREKTKTLWDMHMKG-PHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVL 74
+W TL MH +G P + PP P G+P NSANRKC
Sbjct: 24 LWTTRTMATLNQMHRRGLPKWPP-PPLGPTAGRPQLKGVVLRTFIRKPKKPNSANRKCCR 82
Query: 75 VRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 130
VRLSTG+E V +IPGEGH+LQEH++VL + GR +DLPGVK+ VRG YD HV KK
Sbjct: 83 VRLSTGREAVCFIPGEGHSLQEHHVVLVQGGRTQDLPGVKLTVVRGKYDCGHVQKK 138
>UNIPROTKB|H9L236 [details] [associations]
symbol:MRPS12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
GeneTree:ENSGT00550000075103 OMA:LNQMHRQ EMBL:AADN02036685
Ensembl:ENSGALT00000035751 Uniprot:H9L236
Length = 110
Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 55/108 (50%), Positives = 67/108 (62%)
Query: 24 TLWDMHMKGPHYKKRPPRQ-PLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRLSTGKE 82
TL MH +G K PP+ P G+P NSANRKCV VRLS G+E
Sbjct: 3 TLNQMHRQG-RPKPPPPKPGPTFGRPQLKGVVVRNLIRKPKKPNSANRKCVRVRLSNGRE 61
Query: 83 MVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLPHVVKK 130
+V ++PGEGHNLQEH++VL + GR +DLPGVK+ VRG YD HV KK
Sbjct: 62 VVCFVPGEGHNLQEHHVVLVQGGRTQDLPGVKLTVVRGKYDCAHVQKK 109
>TIGR_CMR|NSE_0689 [details] [associations]
symbol:NSE_0689 "ribosomal protein S12" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
SUPFAM:SSF50249 GO:GO:0019843 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0015935 HAMAP:MF_00403_B
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950
HOGENOM:HOG000040063 OMA:SCPERRG ProtClustDB:PRK05163
RefSeq:YP_506566.2 ProteinModelPortal:Q2GD80 SMR:Q2GD80
STRING:Q2GD80 GeneID:3932187 KEGG:nse:NSE_0689 PATRIC:22681397
BioCyc:NSEN222891:GHFU-702-MONOMER Uniprot:Q2GD80
Length = 122
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 44/84 (52%), Positives = 51/84 (60%)
Query: 41 RQPLLGK-PFAXXXXXXXXXXXXXXXNSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNI 99
R P L K P NSA RK VRLS G E++AYIPGEGHNLQEH++
Sbjct: 20 RVPALNKNPLKRGICSKVYTTTPKKPNSALRKVARVRLSGGAEVIAYIPGEGHNLQEHSV 79
Query: 100 VLCKVGRVKDLPGVKIKCVRGVYD 123
V + GRVKDLPGV+ VRGV+D
Sbjct: 80 VCIRGGRVKDLPGVRYHIVRGVFD 103
>TIGR_CMR|CJE_0540 [details] [associations]
symbol:CJE_0540 "ribosomal protein S12" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0006450 "regulation of translational fidelity" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR005679
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
PROSITE:PS00055 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063 OMA:SCPERRG
ProtClustDB:PRK05163 RefSeq:YP_178557.1 ProteinModelPortal:Q5HVX8
SMR:Q5HVX8 STRING:Q5HVX8 GeneID:3231301 KEGG:cjr:CJE0540
PATRIC:20042802 BioCyc:CJEJ195099:GJC0-555-MONOMER Uniprot:Q5HVX8
Length = 128
Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
Identities = 41/66 (62%), Positives = 49/66 (74%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL++G E+++YI GEGHNLQEH+IVL + GRVKDLPGVK VRG D
Sbjct: 46 NSALRKVAKVRLTSGFEVISYIGGEGHNLQEHSIVLVRGGRVKDLPGVKYHIVRGALDTA 105
Query: 126 HVVKKT 131
V K+T
Sbjct: 106 GVAKRT 111
>CGD|CAL0001528 [details] [associations]
symbol:orf19.2438 species:5476 "Candida albicans" [GO:0005840
"ribosome" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 CGD:CAL0001528
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
HOGENOM:HOG000040063 RefSeq:XP_718461.1 RefSeq:XP_718544.1
ProteinModelPortal:Q5AA46 SMR:Q5AA46 STRING:Q5AA46 GeneID:3639816
GeneID:3639824 KEGG:cal:CaO19.2438 KEGG:cal:CaO19.9974
Uniprot:Q5AA46
Length = 180
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RKC VRL+ G + A IPGEGHNLQEH++VL + GRV+D+PGVK VRG +DL
Sbjct: 102 NSALRKCARVRLTNGNVISALIPGEGHNLQEHHVVLVRGGRVQDVPGVKYHLVRGAFDLV 161
Query: 126 HVVKK 130
V +
Sbjct: 162 GVANR 166
>TIGR_CMR|SPO_3501 [details] [associations]
symbol:SPO_3501 "ribosomal protein S12" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_168696.1
ProteinModelPortal:Q5LMR2 SMR:Q5LMR2 GeneID:3193405
KEGG:sil:SPO3501 PATRIC:23380469 Uniprot:Q5LMR2
Length = 123
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+++YIPGE HNLQEH++VL + GRVKDLPGV+ +RGV D
Sbjct: 46 NSAMRKVAKVRLTNGYEVISYIPGESHNLQEHSVVLIRGGRVKDLPGVRYHILRGVLDTQ 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVKDRKQ 112
>TIGR_CMR|BA_0105 [details] [associations]
symbol:BA_0105 "ribosomal protein S12" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
SUPFAM:SSF50249 GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950
HOGENOM:HOG000040063 OMA:SCPERRG ProtClustDB:PRK05163
RefSeq:NP_842673.1 RefSeq:YP_016710.1 RefSeq:YP_026391.1
ProteinModelPortal:Q81VT5 SMR:Q81VT5 DNASU:1086682
EnsemblBacteria:EBBACT00000011134 EnsemblBacteria:EBBACT00000017848
EnsemblBacteria:EBBACT00000019741 GeneID:1086682 GeneID:2818174
GeneID:2850980 KEGG:ban:BA_0105 KEGG:bar:GBAA_0105 KEGG:bat:BAS0105
BioCyc:BANT260799:GJAJ-116-MONOMER
BioCyc:BANT261594:GJ7F-118-MONOMER Uniprot:Q81VT5
Length = 140
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 40/67 (59%), Positives = 47/67 (70%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ VRG D
Sbjct: 59 NSALRKYARVRLTNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALDTA 118
Query: 126 HVVKKTQ 132
V K+ Q
Sbjct: 119 GVDKRMQ 125
>UNIPROTKB|P0C460 [details] [associations]
symbol:rps12-A "30S ribosomal protein S12, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 EMBL:AY522331 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
ProteinModelPortal:P0C460 SMR:P0C460 Gramene:P0C460
Genevestigator:P0C460 Uniprot:P0C460
Length = 124
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL++G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG D
Sbjct: 46 NSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAV 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 AVKNRQQ 112
>UNIPROTKB|P0C461 [details] [associations]
symbol:rps12-A "30S ribosomal protein S12, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 EMBL:AY522329 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
ProteinModelPortal:P0C461 SMR:P0C461 Gramene:P0C461 Uniprot:P0C461
Length = 124
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL++G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG D
Sbjct: 46 NSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAV 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 AVKNRQQ 112
>UNIPROTKB|P12149 [details] [associations]
symbol:rps12-A "30S ribosomal protein S12, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC;ISS] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 EMBL:X15901 EMBL:AY522330 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843
GO:GO:0015935 ProtClustDB:CHL00051 HAMAP:MF_00403_B
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 PIR:JQ0250 RefSeq:NP_039359.1
RefSeq:NP_039457.2 ProteinModelPortal:P12149 SMR:P12149
STRING:P12149 GeneID:3131385 GeneID:3131499 KEGG:osa:3131385
KEGG:osa:3131499 Gramene:P12149 eggNOG:COG0048 KO:K02950
Uniprot:P12149
Length = 124
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL++G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG D
Sbjct: 46 NSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAV 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 AVKNRQQ 112
>UNIPROTKB|Q6ENC0 [details] [associations]
symbol:rps12 "30S ribosomal protein S12, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0019843 EMBL:AP006728
GO:GO:0015935 RefSeq:YP_052725.1 RefSeq:YP_203383.1
ProteinModelPortal:Q6ENC0 SMR:Q6ENC0 GeneID:2885891 GeneID:3276630
Gramene:Q6ENC0 ProtClustDB:CHL00051 HAMAP:MF_00403_B
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 Uniprot:Q6ENC0
Length = 124
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL++G E+ AYIPG GHNLQEH++VL + GRVKDLPGV+ + +RG D
Sbjct: 46 NSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYRIIRGALDAV 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 AVKNRQQ 112
>UNIPROTKB|P41196 [details] [associations]
symbol:rpsL "30S ribosomal protein S12" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0040007
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006412 GO:GO:0046677 EMBL:BX842574 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 EMBL:X70995 EMBL:L08011
EMBL:AF398879 EMBL:AF398880 EMBL:AF398881 EMBL:AF398882
EMBL:AY156729 EMBL:AY156730 EMBL:AY156732 EMBL:AY156733
EMBL:AF367438 PIR:S39591 RefSeq:NP_215196.1 RefSeq:NP_335122.1
RefSeq:YP_006514025.1 ProteinModelPortal:P41196 SMR:P41196
PRIDE:P41196 EnsemblBacteria:EBMYCT00000002672
EnsemblBacteria:EBMYCT00000072055 GeneID:13318570 GeneID:888259
GeneID:925995 KEGG:mtc:MT0710 KEGG:mtu:Rv0682 KEGG:mtv:RVBD_0682
PATRIC:18123287 TubercuList:Rv0682 Uniprot:P41196
Length = 124
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 38/67 (56%), Positives = 48/67 (71%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK V+L++ E+ AYIPGEGHNLQEH++VL + GRVKDLPGV+ K +RG D
Sbjct: 46 NSALRKVARVKLTSQVEVTAYIPGEGHNLQEHSMVLVRGGRVKDLPGVRYKIIRGSLDTQ 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVKNRKQ 112
>TIGR_CMR|DET_0470 [details] [associations]
symbol:DET_0470 "ribosomal protein S12" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_181214.1
ProteinModelPortal:Q3Z985 SMR:Q3Z985 STRING:Q3Z985 PRIDE:Q3Z985
GeneID:3230165 KEGG:det:DET0470 PATRIC:21608009
BioCyc:DETH243164:GJNF-470-MONOMER Uniprot:Q3Z985
Length = 144
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 38/67 (56%), Positives = 45/67 (67%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRLS E+ AYIPGEGHNLQEH++VL + GRV DLPGV+ +RG D
Sbjct: 60 NSALRKIARVRLSNHMEVTAYIPGEGHNLQEHSVVLIRGGRVPDLPGVRYHIIRGTLDTA 119
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 120 GVANRQQ 126
>POMBASE|SPAC4F8.06 [details] [associations]
symbol:SPAC4F8.06 "mitochondrial ribosomal protein
subunit S12 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003735 "structural constituent of ribosome" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISS] [GO:0006412
"translation" evidence=ISS] [GO:0032543 "mitochondrial translation"
evidence=NAS] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 PomBase:SPAC4F8.06
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005763
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048
HOGENOM:HOG000040063 PIR:T38836 RefSeq:NP_593866.2 HSSP:Q5SHN3
STRING:O14182 EnsemblFungi:SPAC4F8.06.1 GeneID:2543614
OrthoDB:EOG4CZFRD NextBio:20804620 Uniprot:O14182
Length = 162
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 41/84 (48%), Positives = 48/84 (57%)
Query: 44 LLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCK 103
L G PF NSA RK VRLSTG+ + AYIPG GHN QEH +VL +
Sbjct: 61 LEGSPFRRGVCTRVFTVKPKKPNSAVRKVARVRLSTGRSVTAYIPGIGHNAQEHAVVLLR 120
Query: 104 VGRVKDLPGVKIKCVRGVYDLPHV 127
GR +D PGV+ VRGVYD+ V
Sbjct: 121 GGRAQDCPGVQYHVVRGVYDIAGV 144
>WB|WBGene00011391 [details] [associations]
symbol:mrps-12 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0006412 GO:GO:0000003 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
EMBL:Z92838 PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040063
GeneTree:ENSGT00550000075103 PIR:T24380 RefSeq:NP_508023.1
ProteinModelPortal:Q9XTY5 SMR:Q9XTY5 STRING:Q9XTY5 PaxDb:Q9XTY5
EnsemblMetazoa:T03D8.2.1 EnsemblMetazoa:T03D8.2.2 GeneID:180368
KEGG:cel:CELE_T03D8.2 UCSC:T03D8.2 CTD:180368 WormBase:T03D8.2
InParanoid:Q9XTY5 OMA:ISVKANI NextBio:909068 Uniprot:Q9XTY5
Length = 157
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 38/58 (65%), Positives = 42/58 (72%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 123
NS NRKC +VRLSTG E+ AYIP GHNLQEH+ VL K GR +DL VK VRG YD
Sbjct: 92 NSGNRKCAIVRLSTGAEVCAYIPNVGHNLQEHSQVLVKGGRRRDLISVKANIVRGKYD 149
>TIGR_CMR|APH_1035 [details] [associations]
symbol:APH_1035 "ribosomal protein S12" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 RefSeq:YP_505593.1
ProteinModelPortal:Q2GJ58 SMR:Q2GJ58 STRING:Q2GJ58 GeneID:3930709
KEGG:aph:APH_1035 PATRIC:20950820 HOGENOM:HOG000040063 OMA:SCPERRG
ProtClustDB:PRK05163 BioCyc:APHA212042:GHPM-1041-MONOMER
Uniprot:Q2GJ58
Length = 124
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 37/59 (62%), Positives = 45/59 (76%)
Query: 66 NSANRKCVLVRLST-GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 123
NSA RK VR++ G E++AYIPGEGHNLQEH++VL + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVARVRIAGYGSEVIAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGALD 104
>TIGR_CMR|SO_0226 [details] [associations]
symbol:SO_0226 "ribosomal protein S12" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:NP_715866.1
ProteinModelPortal:P59166 SMR:P59166 GeneID:1168109
KEGG:son:SO_0226 PATRIC:23520145 Uniprot:P59166
Length = 124
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+ +YI GEGHNLQEH+++L + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVARVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCA 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVTSRRQ 112
>ASPGD|ASPL0000075253 [details] [associations]
symbol:AN4730 species:162425 "Emericella nidulans"
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR005679
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
GO:GO:0006412 GO:GO:0003735 EMBL:BN001303 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 HOGENOM:HOG000040063
EnsemblFungi:CADANIAT00005699 OMA:LENCPER Uniprot:C8VAU5
Length = 96
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NS RK VRLS+GK + AYIPGEGHN+Q+H++VL + GR D PGVK VRG DL
Sbjct: 17 NSGERKTARVRLSSGKVVTAYIPGEGHNVQQHSVVLVRGGRAPDCPGVKYHLVRGAMDLG 76
Query: 126 HVVKK 130
V +
Sbjct: 77 GVASR 81
>TIGR_CMR|CPS_4767 [details] [associations]
symbol:CPS_4767 "ribosomal protein S12" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_271411.1
ProteinModelPortal:Q47UW1 SMR:Q47UW1 STRING:Q47UW1 GeneID:3520613
KEGG:cps:CPS_4767 PATRIC:21472351
BioCyc:CPSY167879:GI48-4773-MONOMER Uniprot:Q47UW1
Length = 124
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+ +YI GEGHNLQEH+++L + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVARVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCS 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVSDRRQ 112
>UNIPROTKB|P0A7S3 [details] [associations]
symbol:rpsL species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0034337 "RNA folding" evidence=IDA] [GO:0034336 "misfolded RNA
binding" evidence=IDA] [GO:0033120 "positive regulation of RNA
splicing" evidence=IDA] [GO:0000372 "Group I intron splicing"
evidence=IDA] [GO:0046677 "response to antibiotic" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA;IDA] [GO:0000049 "tRNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA;IMP]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 GO:GO:0046677 DrugBank:DB01172 EMBL:U18997
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049
SUPFAM:SSF50249 GO:GO:0019843 PDB:3J00 PDBsum:3J00 GO:GO:0000372
GO:GO:0033120 DrugBank:DB00452 PDB:3J0E PDBsum:3J0E PDB:3EP2
PDB:3EQ3 PDB:3EQ4 PDBsum:3EP2 PDBsum:3EQ3 PDBsum:3EQ4 PDB:3FIH
PDB:3IZV PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627
PDB:3DEG PDBsum:3DEG DrugBank:DB00798 GO:GO:0034337 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ PDB:3J0D PDBsum:3J0D
HAMAP:MF_00403_B PANTHER:PTHR11652 TIGRFAMs:TIGR00981
eggNOG:COG0048 KO:K02950 PDB:1ZN1 PDB:4GAS PDB:4GD1 PDBsum:1ZN1
PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87 PDB:1VS5
PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P PDB:2I2U
PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF PDB:2QBH
PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO PDB:2VHP
PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
PDBsum:4GAQ PDBsum:4GD2 HOGENOM:HOG000040063 OMA:SCPERRG
ProtClustDB:PRK05163 EMBL:V00355 EMBL:AF312716 EMBL:AF312717
EMBL:V00354 EMBL:J01688 PIR:S13738 RefSeq:NP_417801.1
RefSeq:YP_492090.1 PDB:1MJ1 PDBsum:1MJ1 ProteinModelPortal:P0A7S3
SMR:P0A7S3 DIP:DIP-35806N IntAct:P0A7S3 PRIDE:P0A7S3
EnsemblBacteria:EBESCT00000002185 EnsemblBacteria:EBESCT00000016331
GeneID:12932620 GeneID:947845 KEGG:ecj:Y75_p3834 KEGG:eco:b3342
PATRIC:32122116 EchoBASE:EB0904 EcoGene:EG10911
BioCyc:EcoCyc:EG10911-MONOMER BioCyc:ECOL316407:JW3304-MONOMER
DrugBank:DB00479 DrugBank:DB00994 DrugBank:DB00955 DrugBank:DB00919
DrugBank:DB01082 DrugBank:DB00684 EvolutionaryTrace:P0A7S3
Genevestigator:P0A7S3 GO:GO:0034336 Uniprot:P0A7S3
Length = 124
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+ +YI GEGHNLQEH+++L + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCS 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVKDRKQ 112
>UNIPROTKB|Q9KUZ9 [details] [associations]
symbol:rpsL "30S ribosomal protein S12" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 OMA:SCPERRG
ProtClustDB:PRK05163 PIR:A82332 RefSeq:NP_230013.1
ProteinModelPortal:Q9KUZ9 SMR:Q9KUZ9 DNASU:2615038 GeneID:2615038
KEGG:vch:VC0359 PATRIC:20079791 Uniprot:Q9KUZ9
Length = 124
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+ +YI GEGHNLQEH++VL + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCA 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVNDRKQ 112
>TIGR_CMR|CBU_0233 [details] [associations]
symbol:CBU_0233 "ribosomal protein S12" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR005679 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:NP_819277.2
ProteinModelPortal:Q83ES9 SMR:Q83ES9 PRIDE:Q83ES9 GeneID:1208114
KEGG:cbu:CBU_0233 PATRIC:17929159
BioCyc:CBUR227377:GJ7S-239-MONOMER Uniprot:Q83ES9
Length = 124
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 123
NSA RK VR++ G E+ AYI GEGHNLQEH++VL + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVARVRITNGAEVTAYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLD 103
>TIGR_CMR|VC_0359 [details] [associations]
symbol:VC_0359 "ribosomal protein S12" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 OMA:SCPERRG
ProtClustDB:PRK05163 PIR:A82332 RefSeq:NP_230013.1
ProteinModelPortal:Q9KUZ9 SMR:Q9KUZ9 DNASU:2615038 GeneID:2615038
KEGG:vch:VC0359 PATRIC:20079791 Uniprot:Q9KUZ9
Length = 124
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+ +YI GEGHNLQEH++VL + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCA 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVNDRKQ 112
>TIGR_CMR|CHY_2315 [details] [associations]
symbol:CHY_2315 "ribosomal protein S12" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_361124.1
ProteinModelPortal:Q3A9R0 SMR:Q3A9R0 STRING:Q3A9R0 PRIDE:Q3A9R0
GeneID:3728085 KEGG:chy:CHY_2315 PATRIC:21277699
BioCyc:CHYD246194:GJCN-2314-MONOMER Uniprot:Q3A9R0
Length = 126
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 38/67 (56%), Positives = 45/67 (67%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G E+ AYI G GHNLQEH++VL + GRVKDLPGV+ VRG D
Sbjct: 46 NSALRKVARVRLTNGIEVTAYIGGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDCA 105
Query: 126 HVVKKTQ 132
V + Q
Sbjct: 106 GVQNRNQ 112
>TIGR_CMR|ECH_0963 [details] [associations]
symbol:ECH_0963 "ribosomal protein S12" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 GO:GO:0000049 SUPFAM:SSF50249
GO:GO:0019843 GO:GO:0015935 HAMAP:MF_00403_B PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 KO:K02950 HOGENOM:HOG000040063
OMA:SCPERRG ProtClustDB:PRK05163 RefSeq:YP_507750.1
ProteinModelPortal:Q2GFN3 SMR:Q2GFN3 STRING:Q2GFN3 PRIDE:Q2GFN3
GeneID:3927553 KEGG:ech:ECH_0963 PATRIC:20577308
BioCyc:ECHA205920:GJNR-966-MONOMER Uniprot:Q2GFN3
Length = 123
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 66 NSANRKCVLVRLST-GKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 123
NSA RK V+++ G E++AYIPGEGHNLQEH+++L + GRVKDLPGV+ +RG D
Sbjct: 46 NSALRKVARVKIAGYGSEVIAYIPGEGHNLQEHSVILIRGGRVKDLPGVRYHIIRGALD 104
>SGD|S000005319 [details] [associations]
symbol:MRPS12 "Mitochondrial protein" species:4932
"Saccharomyces cerevisiae" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0032543
"mitochondrial translation" evidence=ISA] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=ISA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 SGD:S000005319
EMBL:BK006947 GO:GO:0003735 GO:GO:0032543 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0005763 PANTHER:PTHR11652
TIGRFAMs:TIGR00981 eggNOG:COG0048 HOGENOM:HOG000040063 OMA:SCPERRG
GeneTree:ENSGT00550000075103 OrthoDB:EOG4CZFRD EMBL:Z71651
EMBL:AY558003 PIR:S63367 RefSeq:NP_014434.1
ProteinModelPortal:P53732 SMR:P53732 DIP:DIP-5562N IntAct:P53732
MINT:MINT-574668 STRING:P53732 PaxDb:P53732 PeptideAtlas:P53732
EnsemblFungi:YNR036C GeneID:855772 KEGG:sce:YNR036C CYGD:YNR036c
NextBio:980226 Genevestigator:P53732 GermOnline:YNR036C
Uniprot:P53732
Length = 153
Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 36/65 (55%), Positives = 44/65 (67%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDLP 125
NSA RK VRL+ G + AYIPGEGH+ QEH+IV + GR +DLPGVK +RG DL
Sbjct: 74 NSAQRKACRVRLTNGNVVSAYIPGEGHDAQEHSIVYVRGGRCQDLPGVKYHVIRGAGDLS 133
Query: 126 HVVKK 130
VV +
Sbjct: 134 GVVNR 138
>UNIPROTKB|P28520 [details] [associations]
symbol:RPS12 "Ribosomal protein S12, mitochondrial"
species:39947 "Oryza sativa Japonica Group" [GO:0005739
"mitochondrion" evidence=IC;ISS] InterPro:IPR005679
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PRINTS:PR01034
PROSITE:PS00055 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
EMBL:D21251 EMBL:D32052 PANTHER:PTHR11652 TIGRFAMs:TIGR00981
eggNOG:COG0048 HOGENOM:HOG000040063 EMBL:M57904 PIR:S17913
RefSeq:YP_002000567.1 ProteinModelPortal:P28520 SMR:P28520
STRING:P28520 EnsemblPlants:LOC_Os12g33924.1
EnsemblPlants:LOC_Os12g34062.1 EnsemblPlants:LOC_Os12g34144.1
EnsemblPlants:LOC_Osm1g00290.1 GeneID:6450201 KEGG:osa:6450201
Gramene:P28520 OMA:SHRIRGV Uniprot:P28520
Length = 125
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/59 (62%), Positives = 43/59 (72%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDL 124
NSA RK VRLS ++ A+IPGEGHN QEH+IVL + GRVKD PGVK +RGV DL
Sbjct: 46 NSALRKIAKVRLSNRHDIFAHIPGEGHNSQEHSIVLVRGGRVKDSPGVKSHRIRGVKDL 104
>UNIPROTKB|Q2F983 [details] [associations]
symbol:rps12 "Ribosomal protein S12" species:39946 "Oryza
sativa Indica Group" [GO:0005739 "mitochondrion" evidence=IC]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:DQ167399 GO:GO:0015935 HAMAP:MF_00403_B
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 EMBL:JN861111 EMBL:JN861112
EMBL:JF281153 EMBL:JF281154 EMBL:AP011077 RefSeq:YP_514650.1
ProteinModelPortal:Q2F983 SMR:Q2F983 GeneID:3950682 Gramene:Q2F983
Uniprot:Q2F983
Length = 125
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/59 (62%), Positives = 43/59 (72%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDL 124
NSA RK VRLS ++ A+IPGEGHN QEH+IVL + GRVKD PGVK +RGV DL
Sbjct: 46 NSALRKIAKVRLSNRHDIFAHIPGEGHNSQEHSIVLVRGGRVKDSPGVKSHRIRGVKDL 104
>UNIPROTKB|Q7JAI8 [details] [associations]
symbol:rps12 "Ribosomal protein S12" species:39947 "Oryza
sativa Japonica Group" [GO:0005739 "mitochondrion" evidence=IC]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:BA000029 GenomeReviews:BA000029_GR
EMBL:DQ167807 EMBL:DQ167400 GO:GO:0015935 HAMAP:MF_00403_B
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 RefSeq:YP_002000567.1
EnsemblPlants:LOC_Os12g33924.1 EnsemblPlants:LOC_Os12g34062.1
EnsemblPlants:LOC_Os12g34144.1 EnsemblPlants:LOC_Osm1g00290.1
GeneID:6450201 KEGG:osa:6450201 OMA:SHRIRGV SMR:Q7JAI8
STRING:Q7JAI8 Uniprot:Q7JAI8
Length = 125
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 37/59 (62%), Positives = 43/59 (72%)
Query: 66 NSANRKCVLVRLSTGKEMVAYIPGEGHNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYDL 124
NSA RK VRLS ++ A+IPGEGHN QEH+IVL + GRVKD PGVK +RGV DL
Sbjct: 46 NSALRKIAKVRLSNRHDIFAHIPGEGHNSQEHSIVLVRGGRVKDSPGVKSHRIRGVKDL 104
>DICTYBASE|DDB_G0294074 [details] [associations]
symbol:mrps12 "ribosomal protein S12, mitochondrial"
species:44689 "Dictyostelium discoideum" [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR005679 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PRINTS:PR01034 PROSITE:PS00055
dictyBase:DDB_G0294074 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
EMBL:AB000109 GenomeReviews:AB000109_GR Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:D21196 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00981 eggNOG:COG0048 PIR:T43768
RefSeq:NP_050089.1 ProteinModelPortal:Q23886 STRING:Q23886
GeneID:2193917 KEGG:ddi:DidioMp22 Uniprot:Q23886
Length = 140
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 42/101 (41%), Positives = 51/101 (50%)
Query: 27 DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKC--VLVRLSTG-KEM 83
D +GP KKR + L G P NSA RK V ++L K +
Sbjct: 9 DRKARGPK-KKR--KTLLTGYPQKKGYCMRVYETKPKKPNSAIRKVAKVTIKLKNKRKNL 65
Query: 84 VAYIPGEG-HNLQEHNIVLCKVGRVKDLPGVKIKCVRGVYD 123
+AYIPG G HNLQ + VL K GR +DLPGVK + VR YD
Sbjct: 66 IAYIPGFGPHNLQPLSTVLVKGGRCQDLPGVKYRLVRKHYD 106
>GENEDB_PFALCIPARUM|PFC0290w [details] [associations]
symbol:PFC0290w "40S ribosomal protein S23,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL844502
KO:K02973 GO:GO:0015935 PANTHER:PTHR11652 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 OMA:DGAINFI ProtClustDB:PTZ00067
RefSeq:XP_001351145.1 ProteinModelPortal:O97248 SMR:O97248
PRIDE:O97248 EnsemblProtists:PFC0290w:mRNA GeneID:814387
KEGG:pfa:PFC0290w EuPathDB:PlasmoDB:PF3D7_0306900 Uniprot:O97248
Length = 145
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 38/110 (34%), Positives = 52/110 (47%)
Query: 18 VREKTKTLWDMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL 77
+R +T+ D K H R P G A NSA RKCV V+L
Sbjct: 17 IRRRTQRWADKSYKKSHLGTRWKSNPFRGSSHAKGIVVEKVAIEAKQPNSAYRKCVRVQL 76
Query: 78 -STGKEMVAYIPGEG--HNLQEHNIVLCK-VGR----VKDLPGVKIKCVR 119
GK++ A++PG+G + + E++ VL GR V DLPGVK K V+
Sbjct: 77 IKNGKKITAFVPGDGCLNFIDENDEVLVSGFGRSGHSVGDLPGVKFKVVK 126
>DICTYBASE|DDB_G0272250 [details] [associations]
symbol:rps23 "40S ribosomal protein S23"
species:44689 "Dictyostelium discoideum" [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 dictyBase:DDB_G0272250
GO:GO:0006412 GenomeReviews:CM000151_GR GO:GO:0003735
EMBL:AAFI02000008 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 TIGRFAMs:TIGR00982 OMA:DGAINFI RefSeq:XP_645165.1
ProteinModelPortal:Q55A19 SMR:Q55A19 STRING:Q55A19 PRIDE:Q55A19
EnsemblProtists:DDB0231062 GeneID:8618337 KEGG:ddi:DDB_G0272250
ProtClustDB:PTZ00067 Uniprot:Q55A19
Length = 143
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRLS-TGKEM 83
W D K H+ P G A NSA RKCV V+L GK++
Sbjct: 22 WNDKLYKKAHFGTALKANPFGGASHASGIVVSRLGIEAKQPNSAIRKCVRVQLKKNGKKI 81
Query: 84 VAYIPGEG--HNLQEHNIVLCK-VGR----VKDLPGVKIKCVR 119
A++P +G + +QE++ VL +GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVK 124
>WB|WBGene00004492 [details] [associations]
symbol:rps-23 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0002119 GO:GO:0006412
GO:GO:0018996 GO:GO:0040035 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973 EMBL:Z70684
GO:GO:0015935 PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 OMA:DGAINFI GeneTree:ENSGT00550000074784
PIR:T21497 RefSeq:NP_502365.1 ProteinModelPortal:Q19877 SMR:Q19877
DIP:DIP-27207N MINT:MINT-1046438 STRING:Q19877 PaxDb:Q19877
EnsemblMetazoa:F28D1.7.1 EnsemblMetazoa:F28D1.7.2
EnsemblMetazoa:F28D1.7.3 GeneID:178188 KEGG:cel:CELE_F28D1.7
UCSC:F28D1.7.1 CTD:178188 WormBase:F28D1.7 InParanoid:Q19877
NextBio:900090 Uniprot:Q19877
Length = 143
Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 34/103 (33%), Positives = 46/103 (44%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H R P G A NSA RKCV V+L GK++
Sbjct: 22 WNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVK 124
>FB|FBgn0033912 [details] [associations]
symbol:RpS23 "Ribosomal protein S23" species:7227 "Drosophila
melanogaster" [GO:0006412 "translation" evidence=ISS] [GO:0003735
"structural constituent of ribosome" evidence=ISS;IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS] [GO:0005840
"ribosome" evidence=IDA] [GO:0051298 "centrosome duplication"
evidence=IMP] [GO:0051297 "centrosome organization" evidence=IMP]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 EMBL:AE013599 GO:GO:0051298
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973 GO:GO:0015935
PANTHER:PTHR11652 eggNOG:COG0048 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 CTD:6228 EMBL:AY089523
RefSeq:NP_610939.2 UniGene:Dm.4964 ProteinModelPortal:Q8T3U2
SMR:Q8T3U2 MINT:MINT-852223 STRING:Q8T3U2 PaxDb:Q8T3U2 PRIDE:Q8T3U2
EnsemblMetazoa:FBtr0087575 GeneID:36576 KEGG:dme:Dmel_CG8415
FlyBase:FBgn0033912 InParanoid:Q8T3U2 OrthoDB:EOG4BK3M5
PhylomeDB:Q8T3U2 GenomeRNAi:36576 NextBio:799290 Bgee:Q8T3U2
GermOnline:CG8415 Uniprot:Q8T3U2
Length = 143
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 35/111 (31%), Positives = 48/111 (43%)
Query: 18 VREKTKTLW-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVR 76
V + W D K H R P G A NSA RKCV V+
Sbjct: 14 VNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 73
Query: 77 L-STGKEMVAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
L GK++ A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 74 LIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>ASPGD|ASPL0000058023 [details] [associations]
symbol:AN1345 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0006450 "regulation of translational fidelity" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 EMBL:BN001308 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
KO:K02973 EMBL:AACD01000018 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI
OrthoDB:EOG4M0JB5 RefSeq:XP_658949.1 ProteinModelPortal:Q5BDN5
SMR:Q5BDN5 STRING:Q5BDN5 EnsemblFungi:CADANIAT00001267
GeneID:2877118 KEGG:ani:AN1345.2 Uniprot:Q5BDN5
Length = 145
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 34 HYKKRP-----PRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEMVAYI 87
HYKKR P G A NSA RKCV V+L GK++ A++
Sbjct: 28 HYKKRLLGTAYKSSPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVKVQLIKNGKKVTAFV 87
Query: 88 PGEG--HNLQEHNIVLC----KVGRVK-DLPGVKIKCVR 119
P +G + + E++ VL + G+ K D+PGV+ K V+
Sbjct: 88 PNDGCLNFIDENDEVLLAGFGRKGKAKGDIPGVRFKVVK 126
>UNIPROTKB|F1NDC2 [details] [associations]
symbol:RPS23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0022627
PANTHER:PTHR11652 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 EMBL:AADN02047835 IPI:IPI00602355
Ensembl:ENSGALT00000025176 Uniprot:F1NDC2
Length = 145
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 24 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 83
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 84 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 126
>UNIPROTKB|E1BEQ3 [details] [associations]
symbol:E1BEQ3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 EMBL:DAAA02031102
Ensembl:ENSBTAT00000063143 OMA:NEAPFAG NextBio:20899002
Uniprot:E1BEQ3
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGTSHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>UNIPROTKB|G3X7D5 [details] [associations]
symbol:LOC787803 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
OMA:DGAINFI GeneTree:ENSGT00550000074784 EMBL:DAAA02073203
Ensembl:ENSBTAT00000024424 Uniprot:G3X7D5
Length = 141
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 20 WHDKQYKKAHLGTALKANPFGGASHAKGVVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 79
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 80 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 122
>UNIPROTKB|Q3T199 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 OMA:FACSSHA TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 EMBL:BC102049 IPI:IPI00906795
RefSeq:NP_001029862.1 UniGene:Bt.63544 ProteinModelPortal:Q3T199
SMR:Q3T199 STRING:Q3T199 PRIDE:Q3T199 Ensembl:ENSBTAT00000017770
GeneID:540129 KEGG:bta:540129 CTD:6228 HOVERGEN:HBG054200
OrthoDB:EOG4Z8XXP NextBio:20878431 Uniprot:Q3T199
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>UNIPROTKB|J9NZX6 [details] [associations]
symbol:RPS23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 CTD:6228 EMBL:AAEX03002095
RefSeq:XP_536303.1 ProteinModelPortal:J9NZX6
Ensembl:ENSCAFT00000043903 GeneID:479159 KEGG:cfa:479159
Uniprot:J9NZX6
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>UNIPROTKB|P62266 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006412 "translation" evidence=IC;TAS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005840
"ribosome" evidence=NAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973
GO:GO:0006415 GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0019083 PANTHER:PTHR11652 eggNOG:COG0048
HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI CTD:6228
HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:D14530 EMBL:CR456996
EMBL:BC070221 EMBL:AB007158 IPI:IPI00218606 PIR:S42105
RefSeq:NP_001016.1 UniGene:Hs.527193 ProteinModelPortal:P62266
SMR:P62266 IntAct:P62266 MINT:MINT-5000369 STRING:P62266
PhosphoSite:P62266 DMDM:50403755 PaxDb:P62266 PRIDE:P62266
Ensembl:ENST00000296674 GeneID:6228 KEGG:hsa:6228 UCSC:uc003khu.3
GeneCards:GC05M081569 HGNC:HGNC:10410 MIM:603683 neXtProt:NX_P62266
PharmGKB:PA34813 InParanoid:P62266 PhylomeDB:P62266 ChiTaRS:RPS23
GenomeRNAi:6228 NextBio:24175 ArrayExpress:P62266 Bgee:P62266
CleanEx:HS_RPS23 Genevestigator:P62266 GermOnline:ENSG00000186468
Uniprot:P62266
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>UNIPROTKB|F2Z512 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9823 "Sus
scrofa" [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0015935
PANTHER:PTHR11652 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 EMBL:CU984598
ProteinModelPortal:F2Z512 SMR:F2Z512 PRIDE:F2Z512
Ensembl:ENSSSCT00000015437 Uniprot:F2Z512
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>UNIPROTKB|Q6SA96 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 CTD:6228
HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:AY461380
RefSeq:NP_998929.1 UniGene:Ssc.784 ProteinModelPortal:Q6SA96
SMR:Q6SA96 STRING:Q6SA96 GeneID:396638 KEGG:ssc:396638
Uniprot:Q6SA96
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>MGI|MGI:1913725 [details] [associations]
symbol:Rps23 "ribosomal protein S23" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR005680 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055 MGI:MGI:1913725
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 TIGRFAMs:TIGR00982 OMA:DGAINFI
GeneTree:ENSGT00550000074784 CTD:6228 HOVERGEN:HBG054200
OrthoDB:EOG4Z8XXP EMBL:AK002573 EMBL:AK010594 EMBL:AK010608
EMBL:AK012438 EMBL:AK013720 EMBL:AK050580 EMBL:AK088085
EMBL:AK166994 EMBL:AK168587 EMBL:BC002145 EMBL:BC054435
EMBL:BC078418 IPI:IPI00972920 RefSeq:NP_077137.1 UniGene:Mm.306302
ProteinModelPortal:P62267 SMR:P62267 STRING:P62267
PhosphoSite:P62267 PaxDb:P62267 PRIDE:P62267
Ensembl:ENSMUST00000051955 GeneID:66475 KEGG:mmu:66475
UCSC:uc007rjq.2 InParanoid:P62267 NextBio:321794 Bgee:P62267
CleanEx:MM_RPS23 Genevestigator:P62267
GermOnline:ENSMUSG00000049517 GermOnline:ENSMUSG00000063001
Uniprot:P62267
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>RGD|621039 [details] [associations]
symbol:Rps23 "ribosomal protein S23" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=NAS] [GO:0006412
"translation" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=NAS] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=NAS]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 RGD:621039 GO:GO:0006412
GO:GO:0045182 GO:GO:0005840 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973 GO:GO:0015935
PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 GeneTree:ENSGT00550000074784 CTD:6228
HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:X77398 EMBL:BC058134
IPI:IPI00210238 PIR:S41955 RefSeq:NP_511172.1 UniGene:Rn.2139
ProteinModelPortal:P62268 SMR:P62268 IntAct:P62268 STRING:P62268
PhosphoSite:P62268 PRIDE:P62268 Ensembl:ENSRNOT00000022348
GeneID:124323 KEGG:rno:124323 UCSC:RGD:621039 InParanoid:P62268
NextBio:620455 Genevestigator:P62268 GermOnline:ENSRNOG00000016580
Uniprot:P62268
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>ZFIN|ZDB-GENE-080220-50 [details] [associations]
symbol:rps23 "ribosomal protein S23" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
ZFIN:ZDB-GENE-080220-50 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 KO:K02973
GO:GO:0015935 PANTHER:PTHR11652 eggNOG:COG0048 HOGENOM:HOG000040064
TIGRFAMs:TIGR00982 OMA:DGAINFI GeneTree:ENSGT00550000074784
CTD:6228 HOVERGEN:HBG054200 OrthoDB:EOG4Z8XXP EMBL:FP067440
EMBL:BC153998 EMBL:BC171649 EMBL:BC171653 IPI:IPI00772264
RefSeq:NP_001103591.1 UniGene:Dr.41813 SMR:A8KB78 STRING:A8KB78
Ensembl:ENSDART00000039206 GeneID:100000341 KEGG:dre:100000341
NextBio:20784605 Uniprot:A8KB78
Length = 143
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV+ K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVK 124
>UNIPROTKB|D6RD47 [details] [associations]
symbol:RPS23 "40S ribosomal protein S23" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652
HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 HGNC:HGNC:10410
ChiTaRS:RPS23 EMBL:AC010598 IPI:IPI00966986 SMR:D6RD47
Ensembl:ENST00000510210 Ensembl:ENST00000512493 Uniprot:D6RD47
Length = 134
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/104 (31%), Positives = 44/104 (42%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVRG 120
A++P +G N E N +++ GR V D+PGV+ K G
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKSFHG 125
>POMBASE|SPAC23C11.02c [details] [associations]
symbol:rps23 "40S ribosomal protein S23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 PomBase:SPAC23C11.02c
PomBase:SPBP4H10.13 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI
EMBL:AB001288 PIR:T38240 RefSeq:NP_593633.1 RefSeq:NP_596187.1
ProteinModelPortal:P79057 SMR:P79057 IntAct:P79057 STRING:P79057
EnsemblFungi:SPAC23C11.02c.1 EnsemblFungi:SPBP4H10.13.1
GeneID:2541369 GeneID:2542012 KEGG:spo:SPAC23C11.02c
KEGG:spo:SPBP4H10.13 OrthoDB:EOG4M0JB5 NextBio:20802478
Uniprot:P79057
Length = 143
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 34 HYKKRP-----PRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEMVAYI 87
HYKKR P G A NSA RKCV V+L GK++ A++
Sbjct: 26 HYKKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 85
Query: 88 PGEG--HNLQEHNIVLC----KVGRVK-DLPGVKIKCVR 119
P +G + + E++ VL + G+ K D+PGV+ K V+
Sbjct: 86 PHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVK 124
>POMBASE|SPBP4H10.13 [details] [associations]
symbol:rps2302 "40S ribosomal protein S23 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 PomBase:SPAC23C11.02c
PomBase:SPBP4H10.13 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 HOGENOM:HOG000040064 TIGRFAMs:TIGR00982 OMA:DGAINFI
EMBL:AB001288 PIR:T38240 RefSeq:NP_593633.1 RefSeq:NP_596187.1
ProteinModelPortal:P79057 SMR:P79057 IntAct:P79057 STRING:P79057
EnsemblFungi:SPAC23C11.02c.1 EnsemblFungi:SPBP4H10.13.1
GeneID:2541369 GeneID:2542012 KEGG:spo:SPAC23C11.02c
KEGG:spo:SPBP4H10.13 OrthoDB:EOG4M0JB5 NextBio:20802478
Uniprot:P79057
Length = 143
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 33/99 (33%), Positives = 48/99 (48%)
Query: 34 HYKKRP-----PRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEMVAYI 87
HYKKR P G A NSA RKCV V+L GK++ A++
Sbjct: 26 HYKKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 85
Query: 88 PGEG--HNLQEHNIVLC----KVGRVK-DLPGVKIKCVR 119
P +G + + E++ VL + G+ K D+PGV+ K V+
Sbjct: 86 PHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVK 124
>RGD|1563570 [details] [associations]
symbol:RGD1563570 "similar to ribosomal protein S23"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 RGD:1563570 GO:GO:0006412
GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 OrthoDB:EOG4Z8XXP IPI:IPI00566901
RefSeq:XP_001077912.1 RefSeq:XP_573594.1 Ensembl:ENSRNOT00000046342
GeneID:498360 KEGG:rno:498360 UCSC:RGD:1563570 CTD:498360
NextBio:699547 Uniprot:D4A9Q3
Length = 143
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 66 NSANRKCVLVRL-STGKEMVAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKC 117
NSA RKCV V L GK++ A++P +G N E N +++ GR V D+PGV+ K
Sbjct: 63 NSAIRKCVRVHLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKV 122
Query: 118 VR 119
V+
Sbjct: 123 VK 124
>UNIPROTKB|I3LMI4 [details] [associations]
symbol:LOC100523526 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 OMA:NEAPFAG EMBL:CU633628
RefSeq:XP_003121525.1 Ensembl:ENSSSCT00000026361 GeneID:100523526
KEGG:ssc:100523526 Uniprot:I3LMI4
Length = 143
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/103 (32%), Positives = 44/103 (42%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEM 83
W D K H P G A NSA RKCV V+L GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLKKVGVEAKQPNSAIRKCVRVQLIKNGKKI 81
Query: 84 VAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKCVR 119
A++P +G N E N +++ GR V D+PGV K V+
Sbjct: 82 TAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVHFKVVK 124
>TAIR|locus:2151301 [details] [associations]
symbol:AT5G02960 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0022626 "cytosolic ribosome"
evidence=IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 EMBL:AL162973
KO:K02973 GO:GO:0022627 PANTHER:PTHR11652 eggNOG:COG0048
UniGene:At.22945 HOGENOM:HOG000040064 ProtClustDB:CLSN2687528
TIGRFAMs:TIGR00982 EMBL:AY039983 EMBL:AY052330 EMBL:AY113931
EMBL:Z17759 IPI:IPI00535189 PIR:T48317 RefSeq:NP_195916.1
ProteinModelPortal:P49201 SMR:P49201 STRING:P49201 PaxDb:P49201
PRIDE:P49201 EnsemblPlants:AT5G02960.1 GeneID:831724
KEGG:ath:AT5G02960 GeneFarm:968 TAIR:At5g02960 InParanoid:P49201
OMA:DGAINFI PhylomeDB:P49201 Genevestigator:P49201
GermOnline:AT5G02960 Uniprot:P49201
Length = 142
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 41 RQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLVRL-STGKEMVAYIPGEGH-NLQEHN 98
++P G A NSA RKC V+L GK++ A++P +G N E N
Sbjct: 37 KKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEEN 96
Query: 99 --IVLCKVGR----VKDLPGVKIKCVR 119
+++ GR V D+PGV+ K V+
Sbjct: 97 DEVLIAGFGRKGHAVGDIPGVRFKVVK 123
>CGD|CAL0000513 [details] [associations]
symbol:RPS23A species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0006450 "regulation of translational fidelity"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 GO:GO:0006412 GO:GO:0003735
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
EMBL:AACQ01000038 KO:K02973 GO:GO:0015935 PANTHER:PTHR11652
eggNOG:COG0048 TIGRFAMs:TIGR00982 RefSeq:XP_718756.1
ProteinModelPortal:Q5AAQ8 SMR:Q5AAQ8 STRING:Q5AAQ8 GeneID:3639647
KEGG:cal:CaO19.13632 CGD:CAL0069976 Uniprot:Q5AAQ8
Length = 145
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 66 NSANRKCVLVRL-STGKEMVAYIPGEGH-NLQEHN--IVLCKVGR---VK-DLPGVKIKC 117
NSA RKCV V+L GK++ A++P +G N + N ++L GR K D+PGV+ K
Sbjct: 65 NSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRRGKAKGDIPGVRFKV 124
Query: 118 VR 119
V+
Sbjct: 125 VK 126
>SGD|S000003350 [details] [associations]
symbol:RPS23A "Ribosomal protein 28 (rp28) of the small (40S)
ribosomal subunit, req" species:4932 "Saccharomyces cerevisiae"
[GO:0006450 "regulation of translational fidelity"
evidence=IGI;IMP] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA;IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IGI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR005680 InterPro:IPR006032
Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055 SGD:S000003350
EMBL:BK006941 GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 RefSeq:NP_011633.3 GeneID:853015
KEGG:sce:YGR118W KO:K02973 GO:GO:0006450 GO:GO:0000462 PDB:1S1H
PDBsum:1S1H GO:GO:0022627 PDB:3IZB PDB:3O2Z PDB:3O30 PDB:3U5C
PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3U5C
PDBsum:3U5G KO:K04460 RefSeq:NP_011639.3 GeneID:853023
KEGG:sce:YGR123C PANTHER:PTHR11652 PDB:1K5X PDBsum:1K5X
TIGRFAMs:TIGR00982 EMBL:M96570 EMBL:Z72903 PIR:A46703
RefSeq:NP_015457.1 ProteinModelPortal:P0CX29 SMR:P0CX29
PRIDE:P0CX29 EnsemblFungi:YGR118W EnsemblFungi:YPR132W
GeneID:856250 KEGG:sce:YPR132W CYGD:YGR118w
EvolutionaryTrace:P0CX29 NextBio:972878 ArrayExpress:P0CX29
GermOnline:YGR118W Uniprot:P0CX29
Length = 145
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 66 NSANRKCVLVRL-STGKEMVAYIPGEGH-NLQEHN--IVLCKVGR---VK-DLPGVKIKC 117
NSA RKCV V+L GK++ A++P +G N + N ++L GR K D+PGV+ K
Sbjct: 65 NSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKV 124
Query: 118 VR 119
V+
Sbjct: 125 VK 126
>SGD|S000006336 [details] [associations]
symbol:RPS23B "Ribosomal protein 28 (rp28) of the small (40S)
ribosomal subunit, req" species:4932 "Saccharomyces cerevisiae"
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0006450 "regulation of translational fidelity"
evidence=IGI;IMP] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IGI] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR005680 InterPro:IPR006032 Pfam:PF00164
PIRSF:PIRSF002133 PROSITE:PS00055 SGD:S000006336 GO:GO:0006412
EMBL:BK006949 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:U40829 RefSeq:NP_011633.3 GeneID:853015
KEGG:sce:YGR118W KO:K02973 GO:GO:0006450 GO:GO:0000462
GO:GO:0022627 KO:K04460 RefSeq:NP_011639.3 GeneID:853023
KEGG:sce:YGR123C PANTHER:PTHR11652 TIGRFAMs:TIGR00982 PIR:A46703
RefSeq:NP_015457.1 EnsemblFungi:YGR118W EnsemblFungi:YPR132W
GeneID:856250 KEGG:sce:YPR132W NextBio:972878 EMBL:M96571
ProteinModelPortal:P0CX30 SMR:P0CX30 PRIDE:P0CX30 CYGD:YPR132w
GeneTree:ENSGT00550000074784 ArrayExpress:P0CX30 GermOnline:YPR132W
Uniprot:P0CX30
Length = 145
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 66 NSANRKCVLVRL-STGKEMVAYIPGEGH-NLQEHN--IVLCKVGR---VK-DLPGVKIKC 117
NSA RKCV V+L GK++ A++P +G N + N ++L GR K D+PGV+ K
Sbjct: 65 NSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKV 124
Query: 118 VR 119
V+
Sbjct: 125 VK 126
>TAIR|locus:2074954 [details] [associations]
symbol:AT3G09680 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0022626 "cytosolic ribosome" evidence=IDA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0006412
EMBL:AC016661 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 KO:K02973 GO:GO:0022627 PANTHER:PTHR11652
eggNOG:COG0048 EMBL:AY084484 IPI:IPI00540777 RefSeq:NP_566351.1
UniGene:At.22945 UniGene:At.40058 ProteinModelPortal:Q9SF35
SMR:Q9SF35 STRING:Q9SF35 PaxDb:Q9SF35 PRIDE:Q9SF35
EnsemblPlants:AT3G09680.1 GeneID:820125 KEGG:ath:AT3G09680
GeneFarm:969 TAIR:At3g09680 HOGENOM:HOG000040064 InParanoid:Q9SF35
OMA:FACSSHA PhylomeDB:Q9SF35 ProtClustDB:CLSN2687528
Genevestigator:Q9SF35 GermOnline:AT3G09680 TIGRFAMs:TIGR00982
Uniprot:Q9SF35
Length = 142
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 66 NSANRKCVLVRL-STGKEMVAYIPGEGH-NLQEHN--IVLCKVGR----VKDLPGVKIKC 117
NSA RKC V+L GK++ A++P +G N E N +++ GR V D+PGV+ K
Sbjct: 62 NSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKV 121
Query: 118 VR 119
V+
Sbjct: 122 VK 123
>UNIPROTKB|E1B8G4 [details] [associations]
symbol:E1B8G4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR005680
InterPro:IPR006032 Pfam:PF00164 PIRSF:PIRSF002133 PROSITE:PS00055
GO:GO:0006412 GO:GO:0003735 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0015935 PANTHER:PTHR11652 TIGRFAMs:TIGR00982
GeneTree:ENSGT00550000074784 EMBL:DAAA02031724 IPI:IPI00704180
Ensembl:ENSBTAT00000043597 OMA:FARPANM NextBio:20870773
Uniprot:E1B8G4
Length = 151
Score = 88 (36.0 bits), Expect = 0.00065, P = 0.00065
Identities = 31/103 (30%), Positives = 45/103 (43%)
Query: 26 W-DMHMKGPHYKKRPPRQPLLGKPFAXXXXXXXXXXXXXXXNSANRKCVLV-RLSTGKEM 83
W D K H P G A NSA RKCV V R+ GK++
Sbjct: 22 WHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKRPNSAIRKCVRVQRIKNGKKI 81
Query: 84 VAYIPGEG--HNLQEHNIVLC-----KVGRVKDLPGVKIKCVR 119
A++ +G + ++E++ VL K V D+PGV+ K V+
Sbjct: 82 TAFVSNDGCLNFIEENDEVLVAGFGGKGHAVGDIPGVRFKVVK 124
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.436 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 137 122 0.00091 102 3 11 22 0.37 31
29 0.49 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 578 (61 KB)
Total size of DFA: 136 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 10.50u 0.13s 10.63t Elapsed: 00:00:01
Total cpu time: 10.51u 0.13s 10.64t Elapsed: 00:00:01
Start: Thu Aug 15 16:32:16 2013 End: Thu Aug 15 16:32:17 2013