BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2263
(232 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O08992|SDCB1_MOUSE Syntenin-1 OS=Mus musculus GN=Sdcbp PE=2 SV=1
Length = 299
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 129/214 (60%), Gaps = 48/214 (22%)
Query: 18 KLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQ 77
++ LCKD GKIGLR+ +I G+FV LVQ SPA+LVGLRFGDQ+LQ+NG+ AG + +
Sbjct: 115 EVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDK 174
Query: 78 VHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLL 137
H +L+ I++ +RDRPFER VT+HKDS+GHVGF FK G+I +VK+SSA+RNGLL
Sbjct: 175 AHKVLKQAFGEKITMTIRDRPFERTVTMHKDSSGHVGFIFKSGKITSIVKDSSAARNGLL 234
Query: 138 TDHHILEVNGQNVVGLKNDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN 197
TDHHI E+NGQNV+GLK
Sbjct: 235 TDHHICEINGQNVIGLK------------------------------------------- 251
Query: 198 VVGLKDKEIREIVEKAPCVINLTIMPSYVYHHMM 231
D +I +I+ A V+ +TIMP++++ H++
Sbjct: 252 -----DAQIADILSTAGTVVTITIMPTFIFEHII 280
>sp|Q9JI92|SDCB1_RAT Syntenin-1 OS=Rattus norvegicus GN=Sdcbp PE=1 SV=1
Length = 300
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 129/214 (60%), Gaps = 48/214 (22%)
Query: 18 KLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQ 77
++ LCKD GKIGLR+ ++ G+FV LVQ SPA+LVGLRFGDQ+LQ+NG+ AG + +
Sbjct: 116 EVILCKDQDGKIGLRLKSVDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDK 175
Query: 78 VHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLL 137
H +L+ I++ +RDRPFER VT+HKDS+GHVGF FK G+I +VK+SSA+RNGLL
Sbjct: 176 AHKVLKQAFGEKITMTIRDRPFERTVTMHKDSSGHVGFIFKSGKITSIVKDSSAARNGLL 235
Query: 138 TDHHILEVNGQNVVGLKNDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN 197
TDHHI E+NGQNV+GLK
Sbjct: 236 TDHHICEINGQNVIGLK------------------------------------------- 252
Query: 198 VVGLKDKEIREIVEKAPCVINLTIMPSYVYHHMM 231
D +I +I+ A V+ +TIMP++++ H++
Sbjct: 253 -----DAQIADILSTAGTVVTITIMPAFIFEHII 281
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 87/217 (40%), Gaps = 41/217 (18%)
Query: 3 NIYPSLEDMKYHQMTKLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGS--PAALVGLRFGD 60
++YPSLED+K ++ I + + F+ +V + P + +
Sbjct: 2 SLYPSLEDLKVDKV--------IQAQTASSANPASQAFFLNVVDSAAFPPGGNLYPKLYP 53
Query: 61 QILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRG 120
++ Q G +++ + + + ++ P + RP N + + G +R
Sbjct: 54 ELSQYMGLSLSEAEICENMPVVSGAPTQGQLVA---RPSSVNYMVAPVTGNDAGI--RRA 108
Query: 121 QIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKNDSAGHVGFQFKR---GQIIRLVKES 177
+I + ++E V L D G +G + K G ++LV+ +
Sbjct: 109 EIKQGIRE----------------------VILCKDQDGKIGLRLKSVDNGIFVQLVQAN 146
Query: 178 S-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKA 213
S AS GL +L++NG+N G + +++++A
Sbjct: 147 SPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA 183
>sp|Q99JZ0|SDCB2_MOUSE Syntenin-2 OS=Mus musculus GN=Sdcbp2 PE=2 SV=1
Length = 292
Score = 183 bits (465), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 128/214 (59%), Gaps = 48/214 (22%)
Query: 18 KLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQ 77
++ LCKD GK GLR+ A+ +G+FV LVQ +PA+LVGLRFGDQILQ++G AG N H+
Sbjct: 108 EIHLCKDERGKTGLRLQAVDKGLFVQLVQANTPASLVGLRFGDQILQIDGCDCAGWNTHK 167
Query: 78 VHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLL 137
H +L+ I +V+RDRPF+R VT+HKDS+G VGF K+G+I+ +VK SSA+RNGLL
Sbjct: 168 AHKVLKKASAEKIVMVIRDRPFQRTVTMHKDSSGQVGFSIKKGKIVSVVKGSSAARNGLL 227
Query: 138 TDHHILEVNGQNVVGLKNDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN 197
T+H++ EVNGQNV+GLK
Sbjct: 228 TNHYVCEVNGQNVIGLK------------------------------------------- 244
Query: 198 VVGLKDKEIREIVEKAPCVINLTIMPSYVYHHMM 231
DK++ EI+ A VI LTI+P+ +Y HM+
Sbjct: 245 -----DKKVTEILTTAGDVITLTIIPTVIYEHMI 273
>sp|O00560|SDCB1_HUMAN Syntenin-1 OS=Homo sapiens GN=SDCBP PE=1 SV=1
Length = 298
Score = 181 bits (459), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 48/214 (22%)
Query: 18 KLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQ 77
++ LCKD GKIGLR+ +I G+FV LVQ SPA+LVGLRFGDQ+LQ+NG+ AG + +
Sbjct: 114 EVILCKDQDGKIGLRLKSIDNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDK 173
Query: 78 VHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLL 137
H +L+ I++ +RDRPFER +T+HKDS GHVGF FK G+I +VK+SSA+RNGLL
Sbjct: 174 AHKVLKQAFGEKITMTIRDRPFERTITMHKDSTGHVGFIFKNGKITSIVKDSSAARNGLL 233
Query: 138 TDHHILEVNGQNVVGLKNDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN 197
T+H+I E+NGQNV+GLK
Sbjct: 234 TEHNICEINGQNVIGLK------------------------------------------- 250
Query: 198 VVGLKDKEIREIVEKAPCVINLTIMPSYVYHHMM 231
D +I +I+ + V+ +TIMP++++ H++
Sbjct: 251 -----DSQIADILSTSGTVVTITIMPAFIFEHII 279
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 91/222 (40%), Gaps = 53/222 (23%)
Query: 3 NIYPSLEDMKYH---QMTKLFLCKDIHGKIGLRVAAI--HEG-VFVCLVQEGSPAALVGL 56
++YPSLED+K Q F + I +A H+G ++ L E S +GL
Sbjct: 2 SLYPSLEDLKVDKVIQAQTAFSANPANPAILSEASAPIPHDGNLYPRLYPELS--QYMGL 59
Query: 57 RFGDQILQVNGKTVAGSNMH-QVHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHVGF 115
++ ++ N V+G+ + Q+ A RP N + + VG
Sbjct: 60 SLNEEEIRANVAVVSGAPLQGQLVA----------------RPSSINYMVAPVTGNDVGI 103
Query: 116 QFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKNDSAGHVGFQFKR---GQIIR 172
+R +I + ++E V L D G +G + K G ++
Sbjct: 104 --RRAEIKQGIRE----------------------VILCKDQDGKIGLRLKSIDNGIFVQ 139
Query: 173 LVKESS-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKA 213
LV+ +S AS GL +L++NG+N G + +++++A
Sbjct: 140 LVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQA 181
>sp|Q9H190|SDCB2_HUMAN Syntenin-2 OS=Homo sapiens GN=SDCBP2 PE=2 SV=2
Length = 292
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 129/215 (60%), Gaps = 48/215 (22%)
Query: 18 KLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQ 77
++ LCKD GK GLR+ + +G+FV LVQ +PA+LVGLRFGDQ+LQ++G+ AG + H+
Sbjct: 108 EIHLCKDERGKTGLRLRKVDQGLFVQLVQANTPASLVGLRFGDQLLQIDGRDCAGWSSHK 167
Query: 78 VHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLL 137
H +++ + I +VVRDRPF+R VT+HKDS GHVGF K+G+I+ LVK SSA+RNGLL
Sbjct: 168 AHQVVKKASGDKIVVVVRDRPFQRTVTMHKDSMGHVGFVIKKGKIVSLVKGSSAARNGLL 227
Query: 138 TDHHILEVNGQNVVGLKNDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN 197
T+H++ EV+GQNV+GLK
Sbjct: 228 TNHYVCEVDGQNVIGLK------------------------------------------- 244
Query: 198 VVGLKDKEIREIVEKAPCVINLTIMPSYVYHHMMN 232
DK+I EI+ A V+ LTI+PS +Y HM+
Sbjct: 245 -----DKKIMEILATAGNVVTLTIIPSVIYEHMVK 274
>sp|Q8SQG9|NHRF2_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Oryctolagus
cuniculus GN=SLC9A3R2 PE=1 SV=1
Length = 316
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 88/204 (43%), Gaps = 38/204 (18%)
Query: 25 IHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+HG+ G R G F+ V+ GSPA LR GD++++VNG V G HQV ++
Sbjct: 25 LHGEKGRR------GQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKA 78
Query: 85 CPVNNISIVVRDRPFE----RNVTLHKDSA------GHVGFQFKRGQIIRLVKESSASRN 134
+VV E R +T +D A H ++ K A
Sbjct: 79 VEGETRLLVVDKETDEELRRRQLTCTEDMAQRGLPPAHDPWE---------PKPDWARAG 129
Query: 135 GLLTDHHILEVNG------QNVVGLKNDSAGHVGFQF-----KRGQIIRLVKE-SSASRN 182
L +D +VNG + L+ G+ GF + GQ IR V S A+ +
Sbjct: 130 SLSSDAGQKDVNGPPRELRPRLCHLRKGPQGY-GFNLHSDKSRPGQYIRSVDPGSPAAHS 188
Query: 183 GLLTDHHILEVNGQNVVGLKDKEI 206
GL ++EVNGQNV GL+ E+
Sbjct: 189 GLCAQDRLIEVNGQNVEGLRHAEV 212
>sp|Q9JHL1|NHRF2_MOUSE Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Mus musculus
GN=Slc9a3r2 PE=1 SV=2
Length = 337
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 25 IHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+HG+ G R G F+ V+ GSPA LR GD++++VNG V G HQV ++
Sbjct: 25 LHGEKGRR------GQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKA 78
Query: 85 CPVNNISIVVRDRPFE----RNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDH 140
+VV E R +T ++ A H G K A L +D
Sbjct: 79 VEGQTQLLVVDKETDEELCRRQLTCTEEMA-HRGLPPAHNPW--EPKPDWACSGSLGSDT 135
Query: 141 HILEVNG------QNVVGLKNDSAGHVGFQF-----KRGQIIRLVKE-SSASRNGLLTDH 188
+VNG + L+ G+ GF + GQ IR V S AS +GL
Sbjct: 136 GQKDVNGPPRELRPRLCHLRRGPQGY-GFNLHSDKSRPGQYIRSVDPGSPASHSGLRAQD 194
Query: 189 HILEVNGQNVVGLKDKEI 206
++EVNGQNV GL+ E+
Sbjct: 195 RLIEVNGQNVEGLRHAEV 212
>sp|Q15599|NHRF2_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Homo sapiens
GN=SLC9A3R2 PE=1 SV=2
Length = 337
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 34/202 (16%)
Query: 25 IHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+HG+ G R G F+ V+ GSPA LR GD++++VNG V G HQV ++
Sbjct: 25 LHGEKGRR------GQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKA 78
Query: 85 CPVNNISIVVRDRPFE----RNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDH 140
+VV E R +T ++ A +RG + + T
Sbjct: 79 VEGQTRLLVVDQETDEELRRRQLTCTEEMA-------QRG-LPPAHDPWEPKPDWAHTGS 130
Query: 141 HILEVNGQNVVGLKND--------SAGHVGFQF-------KRGQIIRLVKE-SSASRNGL 184
H E ++V G + G G+ F + GQ IR V S A+R+GL
Sbjct: 131 HSSEAGKKDVSGPLRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAARSGL 190
Query: 185 LTDHHILEVNGQNVVGLKDKEI 206
++EVNGQNV GL+ E+
Sbjct: 191 RAQDRLIEVNGQNVEGLRHAEV 212
>sp|Q920G2|NHRF2_RAT Na(+)/H(+) exchange regulatory cofactor NHE-RF2 OS=Rattus
norvegicus GN=Slc9a3r2 PE=1 SV=1
Length = 337
Score = 57.8 bits (138), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 25 IHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+HG+ G R G F+ V+ GSPA LR GD++++VNG V G HQV ++
Sbjct: 25 LHGEKGRR------GQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVHRIKA 78
Query: 85 CPVNNISIVVRDRPFE----RNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDH 140
+VV E R +T ++ A H G K A L +D
Sbjct: 79 VEGQTQLLVVDKETDEELCRRQLTCTEEMA-HRGLPPAHNPW--EPKPDWACSGSLGSDT 135
Query: 141 HILEVNG------QNVVGLKNDSAGHVGFQF-----KRGQIIRLVKE-SSASRNGLLTDH 188
+VNG + L+ G+ GF + GQ IR V S AS +GL
Sbjct: 136 GHKDVNGPPRELRPRLCHLRRGPQGY-GFNLHSDKSRPGQYIRSVDPGSPASLSGLRAQD 194
Query: 189 HILEVNGQNVVGLKDKEI 206
++EVNGQNV GL+ E+
Sbjct: 195 RLIEVNGQNVEGLRHAEV 212
>sp|Q865P3|NHRF3_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Oryctolagus
cuniculus GN=PDZK1 PE=1 SV=1
Length = 518
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 33/198 (16%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR+ EG V ++++GSPA GL+ GD++L++NG V QV L+R N +
Sbjct: 24 LRIEKDTEGHLVRVIEKGSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKS-GNAV 82
Query: 91 SIVVRD-RPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASR-NGLLTDHHILEV-NG 147
+++V D +E+ V D +KE SR L D ++ V NG
Sbjct: 83 TLLVLDGNSYEKAVKKQVD-----------------LKELGQSRQEADLRDENVAPVMNG 125
Query: 148 ------QNVVGLKNDSAGHVGFQFKRGQ------IIRLVKESSASRNGLLTDHHILEVNG 195
Q + GF K Q + ++ +S A + G+L D H++EVNG
Sbjct: 126 GVETWTQPRLCYLEKQGNSYGFSLKTVQGKKGVYMTDIIPQSVAMKAGVLADDHLIEVNG 185
Query: 196 QNVVGLKDKEIREIVEKA 213
+NV +E+ E V+K+
Sbjct: 186 ENVEDASHEEVVEKVKKS 203
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRP 98
G FV VQ+GSPA L GL D I++VNG V +V +++ N +V +
Sbjct: 400 GSFVKEVQKGSPADLAGLEDEDIIIEVNGVNVLDEPYEKVVDRIQSSGDNVTLLVCGKKA 459
Query: 99 FE 100
+E
Sbjct: 460 YE 461
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
L+ G + + GSPA GL+ D ++ VNGK+V + V L++ +
Sbjct: 257 LKAGPEQRGQIIKDIDSGSPAEAAGLKNNDLVIAVNGKSVEALDHDGVVELIKKG-GDQT 315
Query: 91 SIVVRDR 97
S++V D+
Sbjct: 316 SLLVVDK 322
>sp|Q5ZM14|NHRF1_CHICK Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Gallus gallus
GN=SLC9A3R1 PE=2 SV=1
Length = 333
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 25 IHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+HG+ G G ++ LV+ GSPA GLR GD++L+V+G V + QV +R
Sbjct: 27 LHGEKG------KPGQYIRLVEAGSPAERSGLRAGDRLLEVDGTNVERESHQQVVERIRA 80
Query: 85 CPVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILE 144
+VV+ +P E+ H D G + + E S L
Sbjct: 81 AAGAVRLLVVQPQPEEQPPKTHSDPDGEAQREPPAAETP--AAERSGPEERELRPRLCRI 138
Query: 145 VNGQNVVGLKNDSAGHVGFQFKRGQIIRLV-KESSASRNGLLTDHHILEVNGQNVVG 200
G N G S + + GQ +R V +S A GL I+EVNG +V G
Sbjct: 139 KKGPNGYGFNLHSE-----KSRPGQYVRAVDPDSPAEAAGLRAQDRIVEVNGTSVEG 190
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLR 83
G +V V SPA GLR D+I++VNG +V G V A ++
Sbjct: 157 GQYVRAVDPDSPAEAAGLRAQDRIVEVNGTSVEGKQHADVVAAIK 201
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 162 GFQFKRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLT 220
G + K GQ IRLV+ S A R+GL +LEV+G NV +++ E + A + L
Sbjct: 29 GEKGKPGQYIRLVEAGSPAERSGLRAGDRLLEVDGTNVERESHQQVVERIRAAAGAVRLL 88
Query: 221 IM 222
++
Sbjct: 89 VV 90
>sp|O35430|APBA1_RAT Amyloid beta A4 precursor protein-binding family A member 1
OS=Rattus norvegicus GN=Apba1 PE=1 SV=1
Length = 839
Score = 54.7 bits (130), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 40 VFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIV----V 94
V + + G PA G L GDQI+ +NG ++ G + ++++ + N S V V
Sbjct: 685 VIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKG--LKNQSRVKLNIV 742
Query: 95 RDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLK 154
R P + D +GF + G I L++ A R G+ H I+E+NGQ+VV
Sbjct: 743 RCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATP 802
Query: 155 NDSAGHV 161
++ H+
Sbjct: 803 HEKIVHI 809
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV ++I I+ A I++
Sbjct: 760 QLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHM 819
Query: 220 TIMPSYVY 227
MP+ +Y
Sbjct: 820 KTMPAAMY 827
>sp|Q02410|APBA1_HUMAN Amyloid beta A4 precursor protein-binding family A member 1 OS=Homo
sapiens GN=APBA1 PE=1 SV=3
Length = 837
Score = 54.7 bits (130), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 40 VFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIV----V 94
V + + G PA G L GDQI+ +NG ++ G + ++++ + N S V V
Sbjct: 683 VIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKG--LKNQSRVKLNIV 740
Query: 95 RDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLK 154
R P + D +GF + G I L++ A R G+ H I+E+NGQ+VV
Sbjct: 741 RCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATP 800
Query: 155 NDSAGHV 161
++ H+
Sbjct: 801 HEKIVHI 807
Score = 46.6 bits (109), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV ++I I+ A I++
Sbjct: 758 QLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHM 817
Query: 220 TIMPSYVY 227
MP+ +Y
Sbjct: 818 KTMPAAMY 825
>sp|B2RUJ5|APBA1_MOUSE Amyloid beta A4 precursor protein-binding family A member 1 OS=Mus
musculus GN=Apba1 PE=2 SV=2
Length = 842
Score = 54.3 bits (129), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 7/127 (5%)
Query: 40 VFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIV----V 94
V + + G PA G L GDQI+ +NG ++ G + ++++ + N S V V
Sbjct: 688 VIIANMMHGGPAEKSGKLNIGDQIMSINGTSLVGLPLSTCQSIIKG--LKNQSRVKLNIV 745
Query: 95 RDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLK 154
R P + D +GF + G I L++ A R G+ H I+E+NGQ+VV
Sbjct: 746 RCPPVTTVLIRRPDLRYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATP 805
Query: 155 NDSAGHV 161
++ H+
Sbjct: 806 HEKIVHI 812
Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV ++I I+ A I++
Sbjct: 763 QLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNAVGEIHM 822
Query: 220 TIMPSYVY 227
MP+ +Y
Sbjct: 823 KTMPAAMY 830
>sp|Q5RD33|APBA2_PONAB Amyloid beta A4 precursor protein-binding family A member 2
OS=Pongo abelii GN=APBA2 PE=2 SV=1
Length = 749
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 40 VFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAG-------------SNMHQVHALLRNC 85
V + + G PAA G L GDQI+ +NG ++ G N QV + +C
Sbjct: 595 VILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSC 654
Query: 86 PVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEV 145
P ++ V+ RP D +GF + G I L++ A R G+ H I+E+
Sbjct: 655 P--PVTTVLIKRP---------DLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEI 703
Query: 146 NGQNVVGLKND 156
NGQ+VV ++
Sbjct: 704 NGQSVVATAHE 714
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV ++I + + + I++
Sbjct: 670 QLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHM 729
Query: 220 TIMPSYVY 227
MP+ ++
Sbjct: 730 KTMPAAMF 737
>sp|O35431|APBA2_RAT Amyloid beta A4 precursor protein-binding family A member 2
OS=Rattus norvegicus GN=Apba2 PE=1 SV=1
Length = 750
Score = 53.9 bits (128), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 40 VFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAG-------------SNMHQVHALLRNC 85
V + + G PAA G L GDQI+ +NG ++ G N QV + +C
Sbjct: 596 VILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSC 655
Query: 86 PVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEV 145
P ++ V+ RP D +GF + G I L++ A R G+ H I+E+
Sbjct: 656 P--PVTTVLIKRP---------DLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEI 704
Query: 146 NGQNVVGLKND 156
NGQ+VV ++
Sbjct: 705 NGQSVVATAHE 715
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV ++I + + + I++
Sbjct: 671 QLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHM 730
Query: 220 TIMPSYVY 227
MP+ ++
Sbjct: 731 KTMPAAMF 738
>sp|Q99767|APBA2_HUMAN Amyloid beta A4 precursor protein-binding family A member 2 OS=Homo
sapiens GN=APBA2 PE=1 SV=3
Length = 749
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 40 VFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAG-------------SNMHQVHALLRNC 85
V + + G PAA G L GDQI+ +NG ++ G N QV + +C
Sbjct: 595 VILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSC 654
Query: 86 PVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEV 145
P ++ V+ RP D +GF + G I L++ A R G+ H I+E+
Sbjct: 655 P--PVTTVLIKRP---------DLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEI 703
Query: 146 NGQNVVGLKND 156
NGQ+VV ++
Sbjct: 704 NGQSVVATAHE 714
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV ++I + + + I++
Sbjct: 670 QLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHM 729
Query: 220 TIMPSYVY 227
MP+ ++
Sbjct: 730 KTMPAAMF 737
>sp|P98084|APBA2_MOUSE Amyloid beta A4 precursor protein-binding family A member 2 OS=Mus
musculus GN=Apba2 PE=1 SV=2
Length = 750
Score = 53.5 bits (127), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 40 VFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAG-------------SNMHQVHALLRNC 85
V + + G PAA G L GDQI+ +NG ++ G N QV + +C
Sbjct: 596 VILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSC 655
Query: 86 PVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEV 145
P ++ V+ RP D +GF + G I L++ A R G+ H I+E+
Sbjct: 656 P--PVTTVLIKRP---------DLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEI 704
Query: 146 NGQNVVGLKND 156
NGQ+VV ++
Sbjct: 705 NGQSVVATAHE 715
Score = 42.7 bits (99), Expect = 0.002, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV ++I + + + I++
Sbjct: 671 QLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNSVGEIHM 730
Query: 220 TIMPSYVY 227
MP+ ++
Sbjct: 731 KTMPAAMF 738
>sp|Q5T2W1|NHRF3_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Homo sapiens
GN=PDZK1 PE=1 SV=2
Length = 519
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR+ EG V +V++ SPA GL+ GD++L++NG V QV L+R N++
Sbjct: 24 LRIEKDTEGHLVRVVEKCSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSG-NSV 82
Query: 91 SIVVRD-RPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN 149
+++V D +E+ V D Q ++G ++ S NG + + Q
Sbjct: 83 TLLVLDGDSYEKAVKTRVDLKELGQSQKEQGLSDNIL---SPVMNGGV------QTWTQP 133
Query: 150 VVGLKNDSAGHVGFQFKRGQ------IIRLVKESSASRNGLLTDHHILEVNGQNVVGLKD 203
+ G GF K Q + + + A R G+L D H++EVNG+NV
Sbjct: 134 RLCYLVKEGGSYGFSLKTVQGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASH 193
Query: 204 KEIREIVEKA 213
+E+ E V+K+
Sbjct: 194 EEVVEKVKKS 203
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 18 KLFLCKDIHGK--IGLRVAAIH--EGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGS 73
K LC+ G+ G + AI G F+ VQ+G PA L GL D I++VNG V
Sbjct: 375 KPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDE 434
Query: 74 NMHQV 78
+V
Sbjct: 435 PYEKV 439
Score = 32.3 bits (72), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR + +G + + GSPA GL+ D ++ VNG++V + V ++R +
Sbjct: 257 LRAGSEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRKGG-DQT 315
Query: 91 SIVVRDR 97
S++V D+
Sbjct: 316 SLLVVDK 322
>sp|Q3T0X8|NHRF3_BOVIN Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Bos taurus
GN=PDZK1 PE=2 SV=1
Length = 520
Score = 52.0 bits (123), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR+ +G V ++++GSPA GL+ GD++L++NG V QV L+R N++
Sbjct: 24 LRIEKDTDGHLVRVIEKGSPAEKAGLQDGDRVLRINGVFVDKEEHMQVVDLVRKSG-NSV 82
Query: 91 SIVVRD-RPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEV-NGQ 148
+++V D +E+ + D +K S+ L D V NG
Sbjct: 83 TLLVLDGDSYEKAMKKQVD-----------------LKALGQSQEPSLNDKKAPSVMNGG 125
Query: 149 NVVGLKN------DSAGHVGFQFKRGQ------IIRLVKESSASRNGLLTDHHILEVNGQ 196
+ ++ G GF K Q + + + A + G+L D H++EVNG+
Sbjct: 126 AQMWMQPRLCYLVKEGGSYGFSLKTVQGKNGVYMTDIKPQGVAMKAGVLADDHLIEVNGE 185
Query: 197 NVVGLKDKEIREIVEKAPCVINLTIMPSYVYHH 229
NV +E+ E V+K+ + ++ H
Sbjct: 186 NVEDASHEEVVEKVKKSGSRVTFLLVDKETDKH 218
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 17/212 (8%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR + +G + + SPA GL+ D ++ VNGK+V + V ++R +
Sbjct: 256 LRESPEQKGQIIKDIDPKSPAEKAGLKNNDLVVAVNGKSVESLDHDSVVEMIRKGG-DQT 314
Query: 91 SIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIR--LVKESSASRNGLL--TDHHILEVN 146
S++V D+ + L AG F + + Q + VKE A L + E
Sbjct: 315 SLLVVDKETDNIYKL----AGFSPFFYYQSQELPNGSVKEVPAPTPAPLEVSSPETTEEV 370
Query: 147 GQNVVGLKNDSAGHVGFQFK----RGQIIRLVKE----SSASRNGLLTDHHILEVNGQNV 198
G + L + G G+ F RGQ VKE A GL + I+EVNG N+
Sbjct: 371 GDHKPKLCRLARGEDGYGFHLNAVRGQPGSFVKEVQKGGPADLAGLEDEDVIIEVNGVNM 430
Query: 199 VGLKDKEIREIVEKAPCVINLTIMPSYVYHHM 230
+ +++ + ++ + + L + Y +
Sbjct: 431 LDESYEKVVDRIQSSGKTVTLLVCGKKAYDYF 462
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 18 KLFLCKDIHGKIG----LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNG 67
K LC+ G+ G L G FV VQ+G PA L GL D I++VNG
Sbjct: 374 KPKLCRLARGEDGYGFHLNAVRGQPGSFVKEVQKGGPADLAGLEDEDVIIEVNG 427
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 44/194 (22%)
Query: 6 PSLEDMK-----------YHQMTKLFLCKDIHGKIGLRVAAIH--EGVFVCLVQEGSPAA 52
PSL D K + Q +L K+ G G + + GV++ ++ A
Sbjct: 111 PSLNDKKAPSVMNGGAQMWMQPRLCYLVKE-GGSYGFSLKTVQGKNGVYMTDIKPQGVAM 169
Query: 53 LVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRPF-----ERNVTLHK 107
G+ D +++VNG+ V ++ +V ++ + ++ ++ D+ E+ + + +
Sbjct: 170 KAGVLADDHLIEVNGENVEDASHEEVVEKVKKSG-SRVTFLLVDKETDKHHSEQKIKVKR 228
Query: 108 DSA----------------GHVGFQF-------KRGQIIRLVK-ESSASRNGLLTDHHIL 143
++A G G+ F ++GQII+ + +S A + GL + ++
Sbjct: 229 ETASLKLLPCQPRVVEMKKGSNGYGFYLRESPEQKGQIIKDIDPKSPAEKAGLKNNDLVV 288
Query: 144 EVNGQNVVGLKNDS 157
VNG++V L +DS
Sbjct: 289 AVNGKSVESLDHDS 302
>sp|P70441|NHRF1_MOUSE Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Mus musculus
GN=Slc9a3r1 PE=1 SV=3
Length = 355
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRP 98
G F+ LV+ GSPA GL GD++++VNG+ V QV + +R +N + ++V D
Sbjct: 36 GQFIRLVEPGSPAEKSGLLAGDRLVEVNGENVEKETHQQVVSRIRAA-LNAVRLLVVD-- 92
Query: 99 FERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN--------- 149
E + L K +G R +++R ++S + D H E QN
Sbjct: 93 PETDERLKK-----LGVSI-REELLRPQEKSEQAEPPAAADTH--EAGDQNEAEKSHLRE 144
Query: 150 ----VVGLKNDSAGHVGFQF-----KRGQIIRLV-KESSASRNGLLTDHHILEVNG 195
+ +K G+ GF K GQ IR V +S A +GL I+EVNG
Sbjct: 145 LRPRLCTMKKGPNGY-GFNLHSDKSKPGQFIRAVDPDSPAEASGLRAQDRIVEVNG 199
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 162 GFQFKRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNV 198
G + K GQ IRLV+ S A ++GLL ++EVNG+NV
Sbjct: 30 GEKGKVGQFIRLVEPGSPAEKSGLLAGDRLVEVNGENV 67
>sp|Q5RCF7|NHRF3_PONAB Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Pongo abelii
GN=PDZK1 PE=2 SV=1
Length = 519
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR+ EG V +V++GSPA GL+ GD++L++N V QV L+R N++
Sbjct: 24 LRIEKDTEGHLVRVVEKGSPAEKAGLQDGDRVLRINDVFVDKEEHMQVVDLVRKS-GNSV 82
Query: 91 SIVVRD-RPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGL--LTDHHILEVNG 147
+++V D +E+ V D ++ + KE S N L + + +
Sbjct: 83 TLLVLDGDSYEKAVKTRVDLK----------ELGQRQKEQGLSDNTLSPVMNGGVQTWTQ 132
Query: 148 QNVVGLKNDSAGHVGFQFKRGQ------IIRLVKESSASRNGLLTDHHILEVNGQNVVGL 201
+ L + G GF K Q + + + A + G+L D H++EVNG+NV
Sbjct: 133 PRLCYLVKE-GGSYGFSLKTVQGKKGVYMTDITPQGVAMKAGVLADDHLIEVNGENVEDA 191
Query: 202 KDKEIREIVEKA 213
+++ E V+K+
Sbjct: 192 SHEQVVEKVKKS 203
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 18 KLFLCKDIHGK--IGLRVAAIH--EGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGS 73
K LC+ G+ G + AI G F+ VQ+G PA L GL D I++VNG V
Sbjct: 375 KPKLCRLAKGENGYGFHLNAIRGLPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDE 434
Query: 74 NMHQV 78
+V
Sbjct: 435 PYEKV 439
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR + +G + + GSPA GL+ D ++ VNG++V + V ++R +
Sbjct: 257 LRAGSEQKGQIIKDIDSGSPAEEAGLKNNDLVVAVNGESVETLDHDSVVEMIRKG-GDQT 315
Query: 91 SIVVRDR 97
S++V D+
Sbjct: 316 SLLVVDK 322
>sp|O17583|LIN10_CAEEL Protein lin-10 OS=Caenorhabditis elegans GN=lin-10 PE=1 SV=1
Length = 982
Score = 50.4 bits (119), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 56 LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNN-ISIVVRDRPFERNVTLHK-DSAGHV 113
L GDQI+ +NG ++ G + ++N + + V P V + + D+ +
Sbjct: 845 LNIGDQIININGISLVGLPLSAAQTQIKNMKTATAVRMTVVSTPPVVEVRIRRPDTKYQL 904
Query: 114 GFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKND 156
GF + G I L++ A R G+ H I+E+NG +VV + +D
Sbjct: 905 GFSVQNGVICSLLRGGIAERGGIRVGHRIIEINGTSVVAVAHD 947
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 113 VGFQFKRGQI-IRLVKESSASRNGLLTDHHILEVNGQNVVGLKNDSAGHVGFQFKRGQII 171
VG Q I+ +K ++A R +++ ++EV + + D+ +GF + G I
Sbjct: 860 VGLPLSAAQTQIKNMKTATAVRMTVVSTPPVVEVRIR-----RPDTKYQLGFSVQNGVIC 914
Query: 172 RLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMPSYVY 227
L++ A R G+ H I+E+NG +VV + I ++ A I++ MP+ ++
Sbjct: 915 SLLRGGIAERGGIRVGHRIIEINGTSVVAVAHDRIVNMLATAVGEIHMKTMPTSMF 970
>sp|Q9JIL4|NHRF3_MOUSE Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Mus musculus
GN=Pdzk1 PE=1 SV=1
Length = 519
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR+ +G + +++EGSPA GL GD++L++NG V QV L+R N++
Sbjct: 24 LRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSV 82
Query: 91 SIVVRD-RPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHH-------I 142
+++V D +E+ V D L + + R L D
Sbjct: 83 TLLVLDGDSYEKAVKNQVD----------------LKELDQSQREAALNDKKPGPGMNGA 126
Query: 143 LEVNGQNVVGLKNDSAGHVGFQFKRGQ------IIRLVKESSASRNGLLTDHHILEVNGQ 196
+E Q + GF K Q + ++ + A + G+L D H++EVNG+
Sbjct: 127 VEPCAQPRLCYLVKEGNSFGFSLKTIQGKKGVYLTDIMPQGVAMKAGVLADDHLIEVNGE 186
Query: 197 NVVGLKDKEIREIVEKA 213
NV +E+ E V K+
Sbjct: 187 NVENASHEEVVEKVTKS 203
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 31/187 (16%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR +G + ++ GSPA GL+ D ++ VNGK+V + V ++R +
Sbjct: 257 LRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKG-GDQT 315
Query: 91 SIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNV 150
+++V D+ E +L + S + + Q + + + + G LE G
Sbjct: 316 TLLVLDKEAESIYSLARFSP----LLYCQSQEL----PNGSVKEGPAPIPAPLEATGSEP 367
Query: 151 VGLKNDSAGH-------------VGFQFK--RGQIIRLVKE----SSASRNGLLTDHHIL 191
D+ GH GF RGQ VKE A + GL + I+
Sbjct: 368 T---EDAEGHKPKLCRLLKEDDSYGFHLNAIRGQPGSFVKEVQQGGPADKAGLENEDVII 424
Query: 192 EVNGQNV 198
EVNG+NV
Sbjct: 425 EVNGENV 431
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 9 EDMKYHQMTKLFLCKDIHGKIGLRVAAI--HEGVFVCLVQEGSPAALVGLRFGDQILQVN 66
ED + H+ L K+ G + AI G FV VQ+G PA GL D I++VN
Sbjct: 369 EDAEGHKPKLCRLLKE-DDSYGFHLNAIRGQPGSFVKEVQQGGPADKAGLENEDVIIEVN 427
Query: 67 GKTV 70
G+ V
Sbjct: 428 GENV 431
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 101 RNVTLHKDSAGHVGFQFK-----RGQIIRLVKE-SSASRNGLLTDHHILEVNGQNVVGLK 154
R L K + GF + G +IR+++E S A + GLL +L +NG V
Sbjct: 8 RECKLSKQEGQNYGFFLRIEKDTDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFV---- 63
Query: 155 NDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKD 203
D H Q++ LV++S S L+ D E +N V LK+
Sbjct: 64 -DKEEHA-------QVVELVRKSGNSVTLLVLDGDSYEKAVKNQVDLKE 104
>sp|Q9JJ40|NHRF3_RAT Na(+)/H(+) exchange regulatory cofactor NHE-RF3 OS=Rattus
norvegicus GN=Pdzk1 PE=1 SV=2
Length = 523
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR+ +G V +++EGSPA GL GD++L++NG V QV L+R N++
Sbjct: 24 LRIEKDTDGHLVRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVDLVRKS-GNSV 82
Query: 91 SIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNV 150
+++V D H+ + Q R + K G +E Q
Sbjct: 83 TLLVLDGDSYEKAVKHQVDLKELD-QSPREPALNEKKPDLGMNGG-------VETCAQPR 134
Query: 151 VGLKNDSAGHVGFQFKRGQ------IIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDK 204
+ GF K Q + + + A + G+L D H++EVNG+NV +
Sbjct: 135 LCYLVKEGNSFGFSLKTIQGKKGVFLTDITPQGVAMKAGVLADDHLIEVNGENVENASHE 194
Query: 205 EIREIVEKA 213
E+ E V K+
Sbjct: 195 EVVEKVTKS 203
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 24/196 (12%)
Query: 31 LRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNI 90
LR +G + ++ GSPA GL+ D ++ VNG++V + V ++RN +
Sbjct: 257 LRAGPEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGESVEALDHDGVVEMIRNG-GDQT 315
Query: 91 SIVVRDRPFERNVTLHKDSAGHVGFQFKRGQIIR--LVKESSA------SRNGLLTDHHI 142
+++V D+ +R +L + S + + Q + VKE+ A G T +
Sbjct: 316 TLLVLDKEADRIYSLARFSP----LLYCQSQELPNGSVKEAPAPISAPLEAPGSATTEDV 371
Query: 143 LEVNGQNVVGLKNDSAGHVGFQFK--RGQIIRLVKE----SSASRNGLLTDHHILEVNGQ 196
+ + +K D + GF RGQ VKE A + GL + I+EVNG+
Sbjct: 372 GDHKPKLCRLIKEDDS--YGFHLNAIRGQPGSFVKEVQQGGPADKAGLENEDIIIEVNGE 429
Query: 197 NVVGLKDKEIREIVEK 212
NV +D+ +VE+
Sbjct: 430 NV---QDEPYDRVVER 442
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 27/109 (24%)
Query: 7 SLEDMKYHQMTKLFLCKDIHGKIGLRVAAI--HEGVFVCLVQEGSPAALVGLRFGDQILQ 64
+ ED+ H+ L K+ G + AI G FV VQ+G PA GL D I++
Sbjct: 367 TTEDVGDHKPKLCRLIKE-DDSYGFHLNAIRGQPGSFVKEVQQGGPADKAGLENEDIIIE 425
Query: 65 VNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRPFERNVTLHKDSAGHV 113
VNG+ V+D P++R V K S HV
Sbjct: 426 VNGEN------------------------VQDEPYDRVVERIKSSGEHV 450
>sp|O70248|APBA3_RAT Amyloid beta A4 precursor protein-binding family A member 3
OS=Rattus norvegicus GN=Apba3 PE=2 SV=2
Length = 569
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 25/121 (20%)
Query: 48 GSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRN-------------CPVNNISIV 93
G PA G L GD++ +NG ++ G ++ A +R CP ++
Sbjct: 424 GGPAERCGALSIGDRVTAINGTSLVGLSLAACQAAVREVRRHSSVTLSIIHCP--PVTTA 481
Query: 94 VRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGL 153
V RP R +GF + G I L++ S+A R G+ H I+EVNGQ+VV +
Sbjct: 482 VIHRPHVRE---------QLGFCVENGIICSLLRGSAAERGGVRVGHRIIEVNGQSVVAM 532
Query: 154 K 154
Sbjct: 533 P 533
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ S+A R G+ H I+EVNGQ+VV + I +++ + I++
Sbjct: 491 QLGFCVENGIICSLLRGSAAERGGVRVGHRIIEVNGQSVVAMPHARIIQLLTET-REIHI 549
Query: 220 TIMPSYVY 227
MP+ Y
Sbjct: 550 KTMPAATY 557
>sp|Q4H4B6|SCRIB_DANRE Protein scribble homolog OS=Danio rerio GN=scrib PE=1 SV=1
Length = 1724
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 38 EGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDR 97
EG+F+ V E PAA G++ GD++L+VNG + G+ H LRN + V+R+R
Sbjct: 759 EGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHGAEHHTAVEALRNSGAAVVMTVLRER 818
Query: 98 PFE 100
E
Sbjct: 819 MVE 821
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVA-GSNMHQVHALLRN------------C 85
GVF+ V A+ GLR GD+IL+VN + ++ V ALL N
Sbjct: 1036 GVFISKVIPNGLASQSGLRVGDRILEVNSIDLRHATHQEAVRALLSNKQEIRMLVRRDPS 1095
Query: 86 PVNNISIVVRDRPFER-NVTLHKDSAGHVGFQFKRGQ----IIRLVKESSASRNG-LLTD 139
P IV+ +P E+ +++ + GH G F I ++ +A+R+G L
Sbjct: 1096 PPGMQEIVIHKQPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSNGAAARDGRLRVG 1155
Query: 140 HHILEVNGQNVVGLKNDSAGHV 161
ILEV +++G+ + A V
Sbjct: 1156 MRILEVGNNSLLGMTHTEAVRV 1177
>sp|Q14160|SCRIB_HUMAN Protein scribble homolog OS=Homo sapiens GN=SCRIB PE=1 SV=4
Length = 1630
Score = 48.5 bits (114), Expect = 3e-05, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVA-GSNMHQVHALLRNCPVNNISIVVRDR 97
GVF+ V AA GLR GD+IL VNG+ V ++ V ALLR C +S++VR
Sbjct: 1035 GVFISKVLPRGLAARSGLRVGDRILAVNGQDVRDATHQEAVSALLRPCL--ELSLLVRRD 1092
Query: 98 PFE---RNVTLHKDSAGHVGFQFKRGQ----------------IIRLVKESSASRNG-LL 137
P R + + K +G + G I ++ +A R+G L
Sbjct: 1093 PAPPGLRELCIQKAPGERLGISIRGGARGHAGNPRDPTDEGIFISKVSPTGAAGRDGRLR 1152
Query: 138 TDHHILEVNGQNVVGLKNDSA 158
+LEVN Q+++GL + A
Sbjct: 1153 VGLRLLEVNQQSLLGLTHGEA 1173
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 38 EGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDR 97
EG+F+ V E PAA G+R GD++L+VNG + G+ H+ LR V R+R
Sbjct: 756 EGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRER 815
Query: 98 PFE 100
E
Sbjct: 816 MVE 818
>sp|Q5PYH7|DLG2_DANRE Disks large homolog 2 OS=Danio rerio GN=dlg2 PE=2 SV=1
Length = 881
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 3 NIYPSLEDMKYHQMT----------KLFLCKDIHGKIGLRVAAIH--EGVFVCLVQEGSP 50
N PSL++M+ H+ K+ L K G +G + EG+FV + G P
Sbjct: 399 NRNPSLDEMEGHRFDSQHFQLREPRKIVLHKGSTG-LGFNIVGGEDGEGIFVSFILAGGP 457
Query: 51 AALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRPFE 100
A L G LR GDQIL VNG + G+ Q A L+ ++I+ + RP E
Sbjct: 458 ADLSGELRRGDQILSVNGIDLRGATHEQAAAALKGA-GQTVTIIAQYRPEE 507
>sp|O88888|APBA3_MOUSE Amyloid beta A4 precursor protein-binding family A member 3 OS=Mus
musculus GN=Apba3 PE=1 SV=1
Length = 571
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 25/121 (20%)
Query: 48 GSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRN-------------CPVNNISIV 93
G PA G L GD++ +NG ++ G ++ A +R CP ++
Sbjct: 426 GGPAERCGALSIGDRVTAINGTSLVGLSLAACQAAVREVRRLSSVTLSIIHCP--PVTTA 483
Query: 94 VRDRPFERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGL 153
V RP R +GF + G I L++ +A R G+ H I+EVNGQ+VV +
Sbjct: 484 VIRRPHVRE---------QLGFCVEDGIICSLLRGGAAERGGVRVGHRIIEVNGQSVVAM 534
Query: 154 K 154
Sbjct: 535 P 535
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ +A R G+ H I+EVNGQ+VV + I +++ + I++
Sbjct: 493 QLGFCVEDGIICSLLRGGAAERGGVRVGHRIIEVNGQSVVAMPHARIIQLLTET-REIHI 551
Query: 220 TIMPSYVY 227
MP+ Y
Sbjct: 552 KTMPAATY 559
>sp|Q80U72|SCRIB_MOUSE Protein scribble homolog OS=Mus musculus GN=Scrib PE=1 SV=2
Length = 1612
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTV-AGSNMHQVHALLRNCPVNNISIVVRDR 97
GVF+ V AA GLR GD+IL VNG+ V ++ V ALLR C + +V RD
Sbjct: 1021 GVFISKVLPRGLAARCGLRVGDRILAVNGQDVREATHQEAVSALLRPC-LELCLLVRRDP 1079
Query: 98 PFE--RNVTLHKDSAGHVGFQFKRGQ----------------IIRLVKESSASRNG-LLT 138
P R + + K +G + G I ++ +A R+G L
Sbjct: 1080 PPPGMRELCIQKAPGEKLGISIRGGAKGHAGNPCDPTDEGIFISKVSPTGAAGRDGRLRV 1139
Query: 139 DHHILEVNGQNVVGLKNDSA 158
+LEVN Q+++GL + A
Sbjct: 1140 GLRLLEVNQQSLLGLTHAEA 1159
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%)
Query: 38 EGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDR 97
EG+F+ V E PAA G+R GD++L+VNG + + H+ LR V R+R
Sbjct: 742 EGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQDAEHHEAVEALRGAGAAVQMRVWRER 801
Query: 98 PFE 100
E
Sbjct: 802 MVE 804
>sp|Q5T5U3|RHG21_HUMAN Rho GTPase-activating protein 21 OS=Homo sapiens GN=ARHGAP21 PE=1
SV=1
Length = 1957
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 40 VFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVN-NISIVVRDRP 98
+FV V+EG PA GL GD+I++VNG++V G QV AL++N +S++ +D
Sbjct: 101 IFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKDED 160
Query: 99 FERNVTLHKD 108
+ + KD
Sbjct: 161 ILQVLQFTKD 170
Score = 33.9 bits (76), Expect = 0.85, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 171 IRLVKESS-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMP 223
++ VKE A GL T I++VNG++V+G ++ +++ + + L++MP
Sbjct: 103 VKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMP 156
>sp|Q7KRY7|LAP4_DROME Protein lap4 OS=Drosophila melanogaster GN=scrib PE=1 SV=1
Length = 1851
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 38 EGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRD 96
+G+F+ V E PA L GL+ GD++++VNG V ++ +Q +L+ C + +V R+
Sbjct: 759 DGIFISRVTEAGPADLAGLKVGDKVIKVNGIVVVDADHYQAVQVLKACGAVLVLVVQRE 817
Score = 37.4 bits (85), Expect = 0.085, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 39 GVFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDR 97
G+F+ + G A+ G LR GD+IL+VN V+ + HQ L P + I + ++
Sbjct: 1270 GIFISHIVPGGIASKCGKLRMGDRILKVNEADVSKAT-HQDAVLELLKPGDEIKLTIQHD 1328
Query: 98 PFE---RNVTLHKDSAGHVGFQFKRGQ----------------IIRLVKESSASRNGLL- 137
P + V L K +G K G + ++ +A R+G L
Sbjct: 1329 PLPPGFQEVLLSKAEGERLGMHIKGGLNGQRGNPADPSDEGVFVSKINSVGAARRDGRLK 1388
Query: 138 TDHHILEVNGQNVVGLKNDSAGHV 161
+LEVNG +++G + A +V
Sbjct: 1389 VGMRLLEVNGHSLLGASHQDAVNV 1412
Score = 30.8 bits (68), Expect = 8.8, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 38 EGVFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVV 94
EGVFV + A G L+ G ++L+VNG ++ G++ +LRN N I +VV
Sbjct: 1368 EGVFVSKINSVGAARRDGRLKVGMRLLEVNGHSLLGASHQDAVNVLRNAG-NEIQLVV 1424
>sp|O95049|ZO3_HUMAN Tight junction protein ZO-3 OS=Homo sapiens GN=TJP3 PE=1 SV=2
Length = 933
Score = 45.8 bits (107), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 7 SLEDMKYHQMTKLFLCKDIHGK-IGLRVAAIHE-GVFVCLVQEGSPAALVGLRFGDQILQ 64
S+ED Y T++ + + GK IGLR+A ++ G+FV VQ GSPA G++ GDQILQ
Sbjct: 385 SMEDRGYSPDTRV--VRFLKGKSIGLRLAGGNDVGIFVSGVQAGSPADGQGIQEGDQILQ 442
Query: 65 VN 66
VN
Sbjct: 443 VN 444
>sp|O96018|APBA3_HUMAN Amyloid beta A4 precursor protein-binding family A member 3 OS=Homo
sapiens GN=APBA3 PE=1 SV=1
Length = 575
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 22 CKDIH-----GKIGLRVAAIHEGVFVCLVQE-------GSPAALVG-LRFGDQILQVNGK 68
C+++H G+ GL VA + G L G PA G L GD++ +NG
Sbjct: 392 CREVHLEKRRGE-GLGVALVESGWGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGT 450
Query: 69 TVAGSNMHQVHALLRNCPV-NNISIVVRDRPFERNVTLHKDSA-GHVGFQFKRGQIIRLV 126
++ G + A +R ++++ + P +H+ A +GF + G I L+
Sbjct: 451 SLVGLPLAACQAAVRETKSQTSVTLSIVHCPPVTTAIIHRPHAREQLGFCVEDGIICSLL 510
Query: 127 KESSASRNGLLTDHHILEVNGQNVV 151
+ A R G+ H I+E+NGQ+VV
Sbjct: 511 RGGIAERGGIRVGHRIIEINGQSVV 535
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 160 HVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINL 219
+GF + G I L++ A R G+ H I+E+NGQ+VV I E++ +A +++
Sbjct: 496 QLGFCVEDGIICSLLRGGIAERGGIRVGHRIIEINGQSVVATPHARIIELLTEAYGEVHI 555
Query: 220 TIMPSYVY 227
MP+ Y
Sbjct: 556 KTMPAATY 563
>sp|O14745|NHRF1_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Homo sapiens
GN=SLC9A3R1 PE=1 SV=4
Length = 358
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRP 98
G ++ LV+ GSPA GL GD++++VNG+ V QV + +R +N + ++V D
Sbjct: 36 GQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA-LNAVRLLVVD-- 92
Query: 99 FERNVTLHKDSAGHVGFQFKRGQIIRLVK-------ESSASRNGLLTDHHILEVNGQ--- 148
E + L K +G Q R +++R + ++A G ++ E +
Sbjct: 93 PETDEQLQK-----LGVQV-REELLRAQEAPGQAEPPAAAEVQGAGNENEPREADKSHPE 146
Query: 149 ------NVVGLKNDSAGHVGFQF-----KRGQIIRLV-KESSASRNGLLTDHHILEVNG 195
+ +K +G+ GF K GQ IR V +S A +GL I+EVNG
Sbjct: 147 QRELRPRLCTMKKGPSGY-GFNLHSDKSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNG 204
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 98 PFERNVTLHKDSAGHVGFQF-----KRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNV 150
P R L K G+ GF K GQ IRLV+ S A + GLL ++EVNG+NV
Sbjct: 10 PLPRLCCLEKGPNGY-GFHLHGEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENV 67
Score = 33.9 bits (76), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 162 GFQFKRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNV 198
G + K GQ IRLV+ S A + GLL ++EVNG+NV
Sbjct: 30 GEKGKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENV 67
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLR 83
G F+ V SPA GLR D+I++VNG + G V + +R
Sbjct: 176 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIR 220
>sp|Q28619|NHRF1_RABIT Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Oryctolagus
cuniculus GN=SLC9A3R1 PE=1 SV=3
Length = 358
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 32/184 (17%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRP 98
G ++ LV+ GSPA GL GD++++VNG+ V QV + +R +N + ++V D
Sbjct: 36 GQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA-LNAVRLLVVDPD 94
Query: 99 FERNVTLHKDSAGHVGFQFKRGQIIRLV-------KESSASRNGLLTDHHILEVNGQ--- 148
+ +G Q RG+++R ++ G ++ EV
Sbjct: 95 TDEQFR-------KLGVQI-RGELLRAQAGPEQAGPPAAPGEQGPAGENEPREVEKSHPE 146
Query: 149 ------NVVGLKNDSAGHVGFQF-----KRGQIIRLV-KESSASRNGLLTDHHILEVNGQ 196
+ +K G+ GF + GQ IR V +S A +GL I+EVNG
Sbjct: 147 RRELRPRLCAMKKGPNGY-GFNLHSDKSRPGQFIRAVDPDSPAEASGLREQDRIVEVNGV 205
Query: 197 NVVG 200
V G
Sbjct: 206 CVEG 209
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 98 PFERNVTLHKDSAGHVGFQF-----KRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNV 150
P R L K G+ GF K GQ IRLV+ S A + GLL ++EVNG+NV
Sbjct: 10 PLPRLCCLEKGPNGY-GFHLHGEKGKVGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENV 67
Score = 34.3 bits (77), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 162 GFQFKRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNV 198
G + K GQ IRLV+ S A + GLL ++EVNG+NV
Sbjct: 30 GEKGKVGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENV 67
>sp|Q5PYH5|DLG1L_DANRE Discs large homolog 1-like protein OS=Danio rerio GN=dlg1l PE=2
SV=1
Length = 827
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 EGVFVCLVQEGSPAALVG-LRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRD 96
EG+F+ + G PA L G LR GD+++ VNG + G+ Q A L+N ++IV +
Sbjct: 424 EGIFISFILAGGPADLCGELRKGDRLVSVNGIDLRGATHEQAAAALKNA-GQTVTIVAQY 482
Query: 97 RPFE 100
RP E
Sbjct: 483 RPEE 486
>sp|A2RUV4|RHG21_XENTR Rho GTPase-activating protein 21 OS=Xenopus tropicalis GN=arhgap21
PE=2 SV=1
Length = 1935
Score = 45.4 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 40 VFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+FV V+EG PA GL GD+I++VNG++V G QV AL++N
Sbjct: 106 IFVKQVKEGGPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQN 150
Score = 34.7 bits (78), Expect = 0.56, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 171 IRLVKESS-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMP 223
++ VKE A GL T I++VNG++V+G ++ +++ + + L++MP
Sbjct: 108 VKQVKEGGPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTLELSVMP 161
>sp|Q71M21|RH21B_XENLA Rho GTPase-activating protein 21-B OS=Xenopus laevis GN=arhgap21-b
PE=2 SV=1
Length = 1902
Score = 45.4 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 40 VFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+FV V+EG PA GL GD+I++VNG++V G QV AL++N
Sbjct: 105 IFVKQVKEGGPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQN 149
Score = 34.7 bits (78), Expect = 0.56, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 171 IRLVKESS-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMP 223
++ VKE A GL T I++VNG++V+G ++ +++ + + L++MP
Sbjct: 107 VKQVKEGGPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTLELSVMP 160
>sp|Q6DFV3|RHG21_MOUSE Rho GTPase-activating protein 21 OS=Mus musculus GN=Arhgap21 PE=1
SV=1
Length = 1944
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 40 VFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVN-NISIVVRD 96
+FV V+EG PA GL GD+I++VNG++V G QV AL++N +S++ +D
Sbjct: 107 IFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMPKD 164
Score = 33.9 bits (76), Expect = 0.85, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 171 IRLVKESS-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMP 223
++ VKE A GL T I++VNG++V+G ++ +++ + + L++MP
Sbjct: 109 VKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDTTLELSVMP 162
>sp|Q6DFG0|RH21A_XENLA Rho GTPase-activating protein 21-A OS=Xenopus laevis GN=arhgap21-a
PE=2 SV=1
Length = 1926
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 40 VFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+FV V+EG PA GL GD+I++VNG++V G QV AL++N
Sbjct: 105 IFVKQVKEGGPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQN 149
Score = 34.7 bits (78), Expect = 0.58, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 171 IRLVKESS-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMP 223
++ VKE A GL T I++VNG++V+G ++ +++ + + L++MP
Sbjct: 107 VKQVKEGGPAHEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNSDSTLELSVMP 160
>sp|Q86UT5|NHRF4_HUMAN Na(+)/H(+) exchange regulatory cofactor NHE-RF4 OS=Homo sapiens
GN=PDZD3 PE=1 SV=2
Length = 571
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 6 PSLEDMKYHQMT----KLFLCKDIHGKIGLRVAAIHEG--VFVCLVQEGSPAALVGLRFG 59
PSLED + + FL G G R++ + G +F+ V G AA GL+ G
Sbjct: 451 PSLEDTSVPSVPLGSRQCFLYPGPGGSYGFRLSCVASGPRLFISQVTPGGSAARAGLQVG 510
Query: 60 DQILQVNGKTVAGSN 74
D IL+VNG V G N
Sbjct: 511 DVILEVNGYPVGGQN 525
>sp|Q70Z35|PREX2_HUMAN Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2
protein OS=Homo sapiens GN=PREX2 PE=2 SV=1
Length = 1606
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 16 MTKLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNM 75
+ K L K G G + ++ + LV++GS A + G+ G +I +NG V
Sbjct: 590 IAKSLLIKSNEGSYGFGLEDKNKVPIIKLVEKGSNAEMAGMEVGKKIFAINGDLVFMRPF 649
Query: 76 HQVHALLRNC--PVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRG---QIIRLV-KES 129
++V L++C + ++V +P R DSA +GFQ RG ++ V + +
Sbjct: 650 NEVDCFLKSCLNSRKPLRVLVSTKP--RETVKIPDSADGLGFQI-RGFGPSVVHAVGRGT 706
Query: 130 SASRNGLLTDHHILEVNGQNV 150
A+ GL I++VNG NV
Sbjct: 707 VAAAAGLHPGQCIIKVNGINV 727
>sp|Q9JJ19|NHRF1_RAT Na(+)/H(+) exchange regulatory cofactor NHE-RF1 OS=Rattus
norvegicus GN=Slc9a3r1 PE=1 SV=3
Length = 356
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 39 GVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRNCPVNNISIVVRDRP 98
G F+ LV+ GSPA GL GD++++VNG+ V QV + +R +N + ++V D
Sbjct: 36 GQFIRLVEPGSPAEKSGLLAGDRLVEVNGENVEKETHQQVVSRIRAA-LNAVRLLVVD-- 92
Query: 99 FERNVTLHKDSAGHVGFQFKRGQIIRLVKESSASRNGLLTDHHILEVNGQN--------- 149
E + L K +G R +++R ++S + D + QN
Sbjct: 93 PETDEQLKK-----LGVPI-REELLRAQEKSEHTEPPAAAD--TKKAGDQNEAEKSHLER 144
Query: 150 ------VVGLKNDSAGHVGFQF-----KRGQIIRLV-KESSASRNGLLTDHHILEVNG 195
+ +K G+ GF K GQ IR V +S A +GL I+EVNG
Sbjct: 145 CELRPRLCTMKKGPNGY-GFNLHSDKSKPGQFIRAVDPDSPAEASGLRAQDRIVEVNG 201
Score = 36.2 bits (82), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 98 PFERNVTLHKDSAGHVGFQF-----KRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNV 150
P R L K G+ GF K GQ IRLV+ S A ++GLL ++EVNG+NV
Sbjct: 10 PLPRLCCLEKGPNGY-GFHLHGEKGKVGQFIRLVEPGSPAEKSGLLAGDRLVEVNGENV 67
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 162 GFQFKRGQIIRLVKE-SSASRNGLLTDHHILEVNGQNV 198
G + K GQ IRLV+ S A ++GLL ++EVNG+NV
Sbjct: 30 GEKGKVGQFIRLVEPGSPAEKSGLLAGDRLVEVNGENV 67
>sp|Q9QXY1|ZO3_MOUSE Tight junction protein ZO-3 OS=Mus musculus GN=Tjp3 PE=1 SV=1
Length = 905
Score = 45.1 bits (105), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 7 SLEDMKYHQMTKLFLCKDIHGKIGLRVAAIHE-GVFVCLVQEGSPAALVGLRFGDQILQV 65
SLED Y T++ + IGLR+A ++ G+FV VQ GSPA G++ GD+ILQV
Sbjct: 359 SLEDRGYSPDTRV-VSFPKGASIGLRLAGGNDVGIFVSGVQAGSPADGQGIQEGDEILQV 417
Query: 66 NG 67
NG
Sbjct: 418 NG 419
>sp|O62683|ZO3_CANFA Tight junction protein ZO-3 OS=Canis familiaris GN=TJP3 PE=1 SV=1
Length = 898
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 30/39 (76%), Gaps = 1/39 (2%)
Query: 29 IGLRVAAIHE-GVFVCLVQEGSPAALVGLRFGDQILQVN 66
IGLR+A ++ G+FV VQEGSPA G++ GDQILQVN
Sbjct: 381 IGLRLAGGNDVGIFVSGVQEGSPADGQGIQEGDQILQVN 419
>sp|Q9P227|RHG23_HUMAN Rho GTPase-activating protein 23 OS=Homo sapiens GN=ARHGAP23 PE=1
SV=2
Length = 1491
Score = 44.7 bits (104), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 40 VFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+FV V+E PA GLR GD++++VNG++V G QV AL++N
Sbjct: 98 IFVKNVKEDGPAHRAGLRTGDRLVKVNGESVIGKTYSQVIALIQN 142
Score = 34.3 bits (77), Expect = 0.71, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 171 IRLVKESS-ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMP 223
++ VKE A R GL T +++VNG++V+G ++ +++ + + L+IMP
Sbjct: 100 VKNVKEDGPAHRAGLRTGDRLVKVNGESVIGKTYSQVIALIQNSDDTLELSIMP 153
>sp|Q3LAC4|PREX2_MOUSE Phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2
protein OS=Mus musculus GN=Prex2 PE=2 SV=2
Length = 1598
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 16 MTKLFLCKDIHGKIGLRVAAIHEGVFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNM 75
+ K L K G G + ++ + LV++GS A + G+ G +I +NG V
Sbjct: 582 IAKSLLIKSNEGSYGFGLEDKNKVPIIKLVEKGSNAEMAGMEVGKKIFAINGDLVFLRPF 641
Query: 76 HQVHALLRNC--PVNNISIVVRDRPFERNVTLHKDSAGHVGFQFKRG---QIIRLV-KES 129
+V L++C + ++V +P R DSA +GFQ RG ++ V + +
Sbjct: 642 PEVDCFLKSCLNSRKPLRVLVSTKP--RETVKIPDSADGLGFQI-RGFGPSVVHAVGRGT 698
Query: 130 SASRNGLLTDHHILEVNGQNV 150
A+ GL I++VNG NV
Sbjct: 699 VAAAAGLHPGQCIIKVNGINV 719
>sp|Q69ZH9|RHG23_MOUSE Rho GTPase-activating protein 23 OS=Mus musculus GN=Arhgap23 PE=1
SV=2
Length = 1483
Score = 43.9 bits (102), Expect = 0.001, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 40 VFVCLVQEGSPAALVGLRFGDQILQVNGKTVAGSNMHQVHALLRN 84
+FV V++G PA GLR GD++++VNG+++ G QV L++N
Sbjct: 98 IFVKNVKDGGPAHRAGLRTGDRLVKVNGESIIGKTYSQVIGLIQN 142
Score = 32.0 bits (71), Expect = 3.4, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 28/45 (62%)
Query: 179 ASRNGLLTDHHILEVNGQNVVGLKDKEIREIVEKAPCVINLTIMP 223
A R GL T +++VNG++++G ++ +++ + + L+IMP
Sbjct: 109 AHRAGLRTGDRLVKVNGESIIGKTYSQVIGLIQNSDDTLELSIMP 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,172,630
Number of Sequences: 539616
Number of extensions: 3354168
Number of successful extensions: 9842
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 9085
Number of HSP's gapped (non-prelim): 800
length of query: 232
length of database: 191,569,459
effective HSP length: 114
effective length of query: 118
effective length of database: 130,053,235
effective search space: 15346281730
effective search space used: 15346281730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)