Query psy2264
Match_columns 148
No_of_seqs 140 out of 1049
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 20:17:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 4.9E-40 1.7E-44 288.4 12.8 142 1-146 236-385 (967)
2 4fke_A Aminopeptidase N; zinc 100.0 4.1E-40 1.4E-44 287.9 10.0 143 1-146 183-337 (909)
3 3ebh_A PFA-M1, M1 family amino 100.0 1.6E-39 5.4E-44 282.4 11.0 141 2-146 163-316 (889)
4 2xdt_A Endoplasmic reticulum a 100.0 4.1E-39 1.4E-43 281.2 12.8 142 1-146 174-323 (897)
5 2gtq_A Aminopeptidase N; alani 100.0 2.5E-37 8.7E-42 268.9 12.7 142 1-146 155-308 (867)
6 1z5h_A Tricorn protease intera 100.0 9.6E-38 3.3E-42 269.3 9.8 138 1-146 137-280 (780)
7 3b34_A Aminopeptidase N; prote 100.0 1.7E-37 5.7E-42 270.3 11.2 142 1-146 180-333 (891)
8 3u9w_A Leukotriene A-4 hydrola 100.0 7.4E-36 2.5E-40 251.7 7.0 127 11-146 181-308 (608)
9 2xq0_A LTA-4 hydrolase, leukot 100.0 7.3E-34 2.5E-38 240.5 6.2 122 16-146 193-316 (632)
10 3cia_A Cold-active aminopeptid 100.0 7.3E-33 2.5E-37 233.4 7.6 122 16-146 193-315 (605)
11 4fgm_A Aminopeptidase N family 99.6 7.3E-15 2.5E-19 123.6 8.6 109 32-146 168-288 (597)
12 3cqb_A Probable protease HTPX 82.0 1.2 4E-05 28.7 3.1 68 66-141 27-99 (107)
13 3c37_A Peptidase, M48 family; 69.9 3.2 0.00011 30.7 3.0 11 127-137 102-112 (253)
14 2v4b_A Adamts-1; zymogen, prot 68.0 9.2 0.00031 28.8 5.3 12 126-137 144-155 (300)
15 2rjp_A Adamts-4; metalloprotea 67.4 12 0.00039 28.5 5.8 12 126-137 144-155 (316)
16 2rjq_A Adamts-5; metalloprotea 58.7 12 0.00041 29.1 4.5 12 126-137 144-155 (378)
17 2ddf_A ADAM 17; hydrolase; HET 54.6 4 0.00014 30.0 1.0 11 127-137 184-194 (257)
18 1bud_A Protein (acutolysin A); 54.3 4.1 0.00014 28.7 1.0 12 126-137 134-145 (197)
19 2cki_A Ulilysin; metalloprotea 53.3 4.5 0.00016 30.3 1.2 17 127-144 164-180 (262)
20 1atl_A Atrolysin C; metalloend 53.1 4.4 0.00015 28.7 1.0 12 126-137 137-148 (202)
21 1r55_A ADAM 33; metalloproteas 53.0 18 0.00061 25.7 4.3 12 126-137 137-148 (214)
22 1qua_A Acutolysin-C, hemorrhag 52.8 4.5 0.00015 28.5 1.0 12 126-137 136-147 (197)
23 2ejq_A Hypothetical protein TT 51.1 3.5 0.00012 27.6 0.2 10 128-137 92-101 (130)
24 2w15_A Zinc metalloproteinase 50.8 5.1 0.00017 28.4 1.0 12 126-137 137-148 (202)
25 1yp1_A FII; FII hydrolase; 1.9 49.9 5.3 0.00018 28.3 1.0 12 126-137 136-147 (202)
26 3dte_A IRRE protein; radiotole 49.1 5.1 0.00017 30.7 0.9 35 106-140 76-111 (301)
27 2ero_A VAP-1, vascular apoptos 49.0 30 0.001 27.5 5.4 12 126-137 147-158 (427)
28 1kuf_A Atrolysin E, metallopro 48.7 5.7 0.0002 28.2 1.0 11 127-137 140-150 (203)
29 3b8z_A Protein adamts-5; alpha 46.8 6.4 0.00022 28.2 1.0 12 126-137 142-153 (217)
30 2i47_A ADAM 17; TACE-inhibitor 46.5 6.4 0.00022 29.5 1.0 11 127-137 190-200 (288)
31 3e11_A Predicted zincin-like m 45.6 4.5 0.00015 26.4 0.1 9 128-136 93-101 (114)
32 1u4g_A Elastase, pseudolysin; 43.6 48 0.0016 25.3 5.6 70 60-137 73-146 (301)
33 2e3x_A Coagulation factor X-ac 41.3 8.5 0.00029 30.7 1.1 11 127-137 141-151 (427)
34 2dw0_A Catrocollastatin; apopt 38.5 9.9 0.00034 30.3 1.0 12 126-137 138-149 (419)
35 3k7n_A K-like; SVMP, hydrolase 37.0 53 0.0018 25.9 5.0 10 127-136 141-150 (397)
36 3g5c_A ADAM 22; alpha/beta fol 36.5 61 0.0021 26.5 5.5 11 126-136 135-145 (510)
37 4dd8_A Disintegrin and metallo 33.9 13 0.00044 26.4 0.9 10 127-136 135-144 (208)
38 1bqb_A Protein (aureolysin); h 32.3 95 0.0033 23.6 5.6 21 60-80 67-87 (301)
39 3k7l_A Atragin; SVMP, metallop 32.3 54 0.0018 26.1 4.4 11 127-137 146-156 (422)
40 2jsd_A Matrix metalloproteinas 28.2 19 0.00064 24.3 0.9 21 62-82 25-45 (160)
41 3nqx_A MCP-02, secreted metall 27.4 1.6E+02 0.0056 22.4 6.2 71 60-137 74-147 (306)
42 4ger_A Gentlyase metalloprotea 26.7 20 0.00068 27.5 0.9 22 59-80 62-83 (304)
43 4aw6_A CAAX prenyl protease 1 25.0 24 0.00083 28.7 1.2 14 127-140 331-344 (482)
44 3b4r_A Putative zinc metallopr 24.4 24 0.00083 25.5 1.0 11 128-138 51-61 (224)
45 2ovx_A Matrix metalloproteinas 24.0 25 0.00085 23.8 0.9 20 63-82 28-47 (159)
46 1hy7_A Stromelysin-1, MMP-3; m 23.7 25 0.00086 24.1 0.9 21 62-82 30-50 (173)
47 1cge_A Fibroblast collagenase; 23.7 25 0.00087 24.0 0.9 20 63-82 29-48 (168)
48 3dnz_A Thermolysin; hydrolase, 23.6 25 0.00085 27.1 0.9 22 59-80 69-90 (316)
49 2xs4_A Karilysin protease; hyd 23.4 26 0.00088 23.8 0.9 21 62-82 28-48 (167)
50 4axq_A Archaemetzincin; metall 23.3 29 0.00099 23.9 1.2 9 128-136 117-125 (163)
51 3khi_A Putative metal-dependen 23.1 26 0.0009 26.3 1.0 9 128-136 147-155 (267)
52 2vqx_A Metalloproteinase; ther 22.4 27 0.00092 27.2 0.9 22 60-81 90-111 (341)
53 1hv5_A Stromelysin 3; inhibiti 20.8 31 0.0011 23.4 0.9 20 63-82 30-49 (165)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=4.9e-40 Score=288.41 Aligned_cols=142 Identities=31% Similarity=0.584 Sum_probs=126.0
Q ss_pred CCCcceeeeeCCCEEEEEEecCCCCCceEEEEEEecceeeeec--CC-ceEEEecCccccccHHHHHHHHHHHHHHHHHH
Q psy2264 1 MPVSTSVEIANSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDK--DG-KFRVWGREDVVKTQGQYIFDKGPKILAALSDY 77 (148)
Q Consensus 1 MP~~~~~~~~~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~--~~-~i~v~~~~~~~~~~~~~~l~~~~~~l~~~e~~ 77 (148)
||+.++... .+|+++++|++||||||||+||+||+|+.++.. .| ++++|++|+. .++++++++.++++++++|++
T Consensus 236 ~~~~~~~~~-~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~-~~~~~~al~~~~~~l~~~e~~ 313 (967)
T 3se6_A 236 MPKVKTIEL-EGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDK-RNQTHYALQASLKLLDFYEKY 313 (967)
T ss_dssp SCEEEEEEC-TTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGG-GGGGHHHHHHHHHHHHHHHHH
T ss_pred CCcccceec-CCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcch-HHHHHHHHHHHHHHHHHHHHh
Confidence 677666556 789999999999999999999999999988764 24 9999999998 889999999999999999999
Q ss_pred hCCcCCCCCCcccEEEeCCCCCCchhhhhhhhhhccccccccccc-hhh----hhHHHHhhhhhhcCCeeeecc
Q psy2264 78 MGFDYYKMLPKMDLVAVPDFDAGAMENWGMNTYRLGLVVEATHLY-LLQ----HTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 78 ~g~~y~~p~~k~d~v~vp~~~~~~MEn~Gli~~~e~~ll~~~~~~-~~~----~~~iaHElaHqWfGn~Vt~~~ 146 (148)
||+|| |++|+|+|++|+|..||||||||++|+++.+++++... ... ..+||||+|||||||+||++.
T Consensus 314 fg~~Y--P~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT~~w 385 (967)
T 3se6_A 314 FDIYY--PLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEW 385 (967)
T ss_dssp HTCCC--CSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEEESS
T ss_pred cCCCC--CcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccccCC
Confidence 99999 99999999999999999999999999999999877632 222 246999999999999999653
No 2
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=4.1e-40 Score=287.86 Aligned_cols=143 Identities=31% Similarity=0.591 Sum_probs=123.4
Q ss_pred CCCcceeee-e-CCCEEEEEEecCCCCCceEEEEEEecceeeeecC--C-ceEEEecCccccc--cHHHHHHHHHHHHHH
Q psy2264 1 MPVSTSVEI-A-NSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDKD--G-KFRVWGREDVVKT--QGQYIFDKGPKILAA 73 (148)
Q Consensus 1 MP~~~~~~~-~-~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~~--~-~i~v~~~~~~~~~--~~~~~l~~~~~~l~~ 73 (148)
||+.++... . .+|+++++|++||||||||+||+||+|+..+... | ++++|++|+. .+ +++++++.+++++++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~-~~~~~~~~al~~~~~~l~~ 261 (909)
T 4fke_A 183 MPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNA-IAEGHGMYALNVTGPILNF 261 (909)
T ss_dssp SCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHH-HHTTTTHHHHHHHHHHHHH
T ss_pred CcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecch-hhhhhHHHHHHHHHHHHHH
Confidence 677655433 1 5789999999999999999999999999887654 3 8999999986 44 467999999999999
Q ss_pred HHHHhCCcCCCCCCcccEEEeCCCCCCchhhhhhhhhhccccccccccchh-hh----hHHHHhhhhhhcCCeeeecc
Q psy2264 74 LSDYMGFDYYKMLPKMDLVAVPDFDAGAMENWGMNTYRLGLVVEATHLYLL-QH----TSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 74 ~e~~~g~~y~~p~~k~d~v~vp~~~~~~MEn~Gli~~~e~~ll~~~~~~~~-~~----~~iaHElaHqWfGn~Vt~~~ 146 (148)
||++||.|| |++|+|+|++|+|..||||||||++|+++.++++++.... .+ .+||||+|||||||+|||+.
T Consensus 262 ~e~~~~~~Y--p~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaHElAHqWFGnlVT~~~ 337 (909)
T 4fke_A 262 FANHYNTSY--PLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAW 337 (909)
T ss_dssp HHHHTTSCC--SSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESS
T ss_pred HHHhccCCC--CCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHHHHHhhhhcCeecccc
Confidence 999999999 9999999999999999999999999999999988765322 21 36999999999999999754
No 3
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=1.6e-39 Score=282.43 Aligned_cols=141 Identities=23% Similarity=0.339 Sum_probs=122.9
Q ss_pred CCcceeeeeCCCEEEEEEecCCCCCceEEEEEEecceeeeec-----CC---ceEEEecCccccccHHHHHHHHHHHHHH
Q psy2264 2 PVSTSVEIANSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDK-----DG---KFRVWGREDVVKTQGQYIFDKGPKILAA 73 (148)
Q Consensus 2 P~~~~~~~~~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~-----~~---~i~v~~~~~~~~~~~~~~l~~~~~~l~~ 73 (148)
|+.++... .+|+++++|++|+||||||+||+||+|+.+++. .| ++++|++++. .++++++++.+++++++
T Consensus 163 ~l~~~~~~-~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~-~~~~~~al~~~~~~l~~ 240 (889)
T 3ebh_A 163 DKVNEFEI-PGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKY-VSKLQWALECLKKSMAF 240 (889)
T ss_dssp EEEEEEEE-TTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGG-GGGGHHHHHHHHHHHHH
T ss_pred ccccceec-CCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCc-HHHHHHHHHHHHHHHHH
Confidence 44444445 789999999999999999999999999988752 33 6899999998 89999999999999999
Q ss_pred HHHHhCCcCCCCCCcccEEEeCCCCCCchhhhhhhhhhccccccccccc-hh----hhhHHHHhhhhhhcCCeeeecc
Q psy2264 74 LSDYMGFDYYKMLPKMDLVAVPDFDAGAMENWGMNTYRLGLVVEATHLY-LL----QHTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 74 ~e~~~g~~y~~p~~k~d~v~vp~~~~~~MEn~Gli~~~e~~ll~~~~~~-~~----~~~~iaHElaHqWfGn~Vt~~~ 146 (148)
+|++||+|| |++|||+|++|+|+.||||||||++|+++.+++++... .. ...+||||+|||||||+||++.
T Consensus 241 ~e~~fG~pY--P~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~~~ 316 (889)
T 3ebh_A 241 DEDYFGLEY--DLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRD 316 (889)
T ss_dssp HHHHHCCCC--CSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEESS
T ss_pred HHHHHCCCC--CCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeeecc
Confidence 999999999 99999999999999999999999999999999876542 21 1246999999999999999753
No 4
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=4.1e-39 Score=281.25 Aligned_cols=142 Identities=33% Similarity=0.605 Sum_probs=125.2
Q ss_pred CCCcceeeeeCCCEEEEEEecCCCCCceEEEEEEecceeeeec--CC-ceEEEecCccccccHHHHHHHHHHHHHHHHHH
Q psy2264 1 MPVSTSVEIANSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDK--DG-KFRVWGREDVVKTQGQYIFDKGPKILAALSDY 77 (148)
Q Consensus 1 MP~~~~~~~~~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~--~~-~i~v~~~~~~~~~~~~~~l~~~~~~l~~~e~~ 77 (148)
||+.++... .+|+++++|+.|+||||||+||+||+|+.++.. .| ++++|++++. .++++++++.+++++++++++
T Consensus 174 ~~~~~~~~~-~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~-~~~~~~al~~~~~~l~~~e~~ 251 (897)
T 2xdt_A 174 MPLVKSVTV-AEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDK-INQADYALDAAVTLLEFYEDY 251 (897)
T ss_dssp SCEEEEEEE-ETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTT-GGGCHHHHHHHHHHHHHHHHH
T ss_pred CCccceEec-CCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCCh-HHHHHHHHHHHHHHHHHHHHH
Confidence 566665555 678999999999999999999999999998862 24 9999999998 888999999999999999999
Q ss_pred hCCcCCCCCCcccEEEeCCCCCCchhhhhhhhhhccccccccccchh-h----hhHHHHhhhhhhcCCeeeecc
Q psy2264 78 MGFDYYKMLPKMDLVAVPDFDAGAMENWGMNTYRLGLVVEATHLYLL-Q----HTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 78 ~g~~y~~p~~k~d~v~vp~~~~~~MEn~Gli~~~e~~ll~~~~~~~~-~----~~~iaHElaHqWfGn~Vt~~~ 146 (148)
||+|| |++|+|+|++|+|..||||||||++|+|..+++++..... . ..+||||+|||||||+||++.
T Consensus 252 fg~~Y--P~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT~~~ 323 (897)
T 2xdt_A 252 FSIPY--PLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEW 323 (897)
T ss_dssp TTCCC--CSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESS
T ss_pred hCCCC--CccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEeccCC
Confidence 99999 9999999999999999999999999999999987664321 1 236999999999999999753
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=2.5e-37 Score=268.95 Aligned_cols=142 Identities=18% Similarity=0.237 Sum_probs=122.6
Q ss_pred CCCcceeeeeCCCEEEEEEecCCCCCceEEEEEEecceeeeec----CC---ceEEEecCccccccHHHHHHHHHHHHHH
Q psy2264 1 MPVSTSVEIANSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDK----DG---KFRVWGREDVVKTQGQYIFDKGPKILAA 73 (148)
Q Consensus 1 MP~~~~~~~~~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~----~~---~i~v~~~~~~~~~~~~~~l~~~~~~l~~ 73 (148)
||+.++... .+|+++++|+.++|||+||+||+||+|+..+.. .| ++++|++++. .++++++++.+++++++
T Consensus 155 g~l~~~~~~-~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~-~~~~~~al~~~~~~l~~ 232 (867)
T 2gtq_A 155 GNKIDGGEF-SDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEAD-KPKVGFAVESLKNAMKW 232 (867)
T ss_dssp SEEEEEEEC-TTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTT-GGGCHHHHHHHHHHHHH
T ss_pred Cccccceee-cCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEecccc-HHHHHHHHHHHHHHHHH
Confidence 344444444 688999999999999999999999999988762 23 7899999998 88899999999999999
Q ss_pred HHHHhCCcCCCCCCcccEEEeCCCCCCchhhhhhhhhhccccccccccch-h----hhhHHHHhhhhhhcCCeeeecc
Q psy2264 74 LSDYMGFDYYKMLPKMDLVAVPDFDAGAMENWGMNTYRLGLVVEATHLYL-L----QHTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 74 ~e~~~g~~y~~p~~k~d~v~vp~~~~~~MEn~Gli~~~e~~ll~~~~~~~-~----~~~~iaHElaHqWfGn~Vt~~~ 146 (148)
+|++||+|| |++|+|+|++|+|..||||||||++|+++.++.+++... . ...+||||+|||||||+||++.
T Consensus 233 ~e~~fG~pY--P~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGnlVT~~~ 308 (867)
T 2gtq_A 233 DETRFGLEY--DLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGNRVTCRD 308 (867)
T ss_dssp HHHHHCCCC--CSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTBEESS
T ss_pred HHHHhCCCC--CCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCcEEEecc
Confidence 999999999 999999999999999999999999999999998765322 1 1246999999999999999763
No 6
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=9.6e-38 Score=269.35 Aligned_cols=138 Identities=30% Similarity=0.486 Sum_probs=119.0
Q ss_pred CCCcceeeeeCCCEEEEEEecCCCCCceEEEEEEecceeeeecC-C-ceEEEecCccccccHHHHHHHHHHHHHHHHHHh
Q psy2264 1 MPVSTSVEIANSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDKD-G-KFRVWGREDVVKTQGQYIFDKGPKILAALSDYM 78 (148)
Q Consensus 1 MP~~~~~~~~~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~~-~-~i~v~~~~~~~~~~~~~~l~~~~~~l~~~e~~~ 78 (148)
||+.++ . .+|+++++|++||||||||+||+||+|+..+... + ++++|++++ ++++++++.+++++++++++|
T Consensus 137 ~~~~~~--~-~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~gv~~~v~~~~~---~~~~~al~~~~~~l~~~e~~f 210 (780)
T 1z5h_A 137 MPPKRI--E-VSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYRDIDLILASLKD---IRSKYPLDMARKSVEFYENYF 210 (780)
T ss_dssp SCEEEE--E-ESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEETTEEEEEEESSC---CCCSHHHHHHHHHHHHHHHHH
T ss_pred Cccccc--c-CCCceEEEEecCCcccceEEEEEEeccEEEeeccCCeeEEEEEccc---hhHHHHHHHHHHHHHHHHHHh
Confidence 455443 3 5788999999999999999999999999988653 4 899999987 466899999999999999999
Q ss_pred CCcCCCCCCcccEEEeCCCCCCchhhhhhhhhhccccccccccchhh----hhHHHHhhhhhhcCCeeeecc
Q psy2264 79 GFDYYKMLPKMDLVAVPDFDAGAMENWGMNTYRLGLVVEATHLYLLQ----HTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 79 g~~y~~p~~k~d~v~vp~~~~~~MEn~Gli~~~e~~ll~~~~~~~~~----~~~iaHElaHqWfGn~Vt~~~ 146 (148)
|+|| |++|+|+|++|+|..|||||||+++|+++.+++++...... ..+||||+|||||||+||++.
T Consensus 211 g~~Y--P~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~ 280 (780)
T 1z5h_A 211 GIPY--ALPKMHLISVPEFGAGAMENWGAITFREIYMDIAENSAVTVKRNSANVIAHEIAHQWFGDLVTMKW 280 (780)
T ss_dssp SSCC--SSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCCTTSCHHHHHHHHHHHHHHHHHTTBTTTEEESS
T ss_pred CCCC--CCccCCEEEcCCCCCCcccccCeeEeecceEeecCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Confidence 9999 99999999999999999999999999999988874333222 246999999999999999753
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=1.7e-37 Score=270.32 Aligned_cols=142 Identities=19% Similarity=0.247 Sum_probs=123.1
Q ss_pred CCCcceeeeeCCCEEEEEEecCCCCCceEEEEEEecceeeeec----CC---ceEEEecCccccccHHHHHHHHHHHHHH
Q psy2264 1 MPVSTSVEIANSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDK----DG---KFRVWGREDVVKTQGQYIFDKGPKILAA 73 (148)
Q Consensus 1 MP~~~~~~~~~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~----~~---~i~v~~~~~~~~~~~~~~l~~~~~~l~~ 73 (148)
||+.++... .+|+++++|+.++|||+||+||+||+|+..+.. .| ++++|++++. .++++++++.+++++++
T Consensus 180 g~l~~~~~~-~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~-~~~~~~al~~~~~~l~~ 257 (891)
T 3b34_A 180 GNRVAQGEL-ENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGN-LDRAPWAMTSLKNSMKW 257 (891)
T ss_dssp SEEEEEEEC-STTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTC-GGGCHHHHHHHHHHHHH
T ss_pred Cccccceee-cCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCc-HHHHHHHHHHHHHHHHH
Confidence 344444444 688999999999999999999999999988752 23 7899999998 88999999999999999
Q ss_pred HHHHhCCcCCCCCCcccEEEeCCCCCCchhhhhhhhhhccccccccccch-h----hhhHHHHhhhhhhcCCeeeecc
Q psy2264 74 LSDYMGFDYYKMLPKMDLVAVPDFDAGAMENWGMNTYRLGLVVEATHLYL-L----QHTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 74 ~e~~~g~~y~~p~~k~d~v~vp~~~~~~MEn~Gli~~~e~~ll~~~~~~~-~----~~~~iaHElaHqWfGn~Vt~~~ 146 (148)
+|++||+|| |++|||+|++|+|..|||||||+++|+++.++.++.... . ...+||||+|||||||+||++.
T Consensus 258 ~e~~fG~pY--P~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFGNlVT~~~ 333 (891)
T 3b34_A 258 DEERFGLEY--DLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRD 333 (891)
T ss_dssp HHHHHCCCC--CSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEESS
T ss_pred HHHHhCCCC--CCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhCCCCcccc
Confidence 999999999 999999999999999999999999999999998765422 1 1246999999999999999764
No 8
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=7.4e-36 Score=251.74 Aligned_cols=127 Identities=21% Similarity=0.354 Sum_probs=113.4
Q ss_pred CCCEEEEEEecCCCCCceEEEEEEecceeeeecCCceEEEecCccccccHHHHHHHHHHHHHHHHHHhCCcCCCCCCccc
Q psy2264 11 NSDKVTDTFQQSPPMPTYLVGFAVFEFNSLSDKDGKFRVWGREDVVKTQGQYIFDKGPKILAALSDYMGFDYYKMLPKMD 90 (148)
Q Consensus 11 ~~~~~~~~F~~tppmstYl~a~~vg~f~~~~~~~~~i~v~~~~~~~~~~~~~~l~~~~~~l~~~e~~~g~~y~~p~~k~d 90 (148)
.+++++++|++++||||||+||+||+|+..+. ..++++|++++. .+++.++++.++++++++|+++| || |++|+|
T Consensus 181 ~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~-~~~~~v~~~p~~-~~~~~~~~~~~~~~l~~~e~~~g-~Y--p~~~~~ 255 (608)
T 3u9w_A 181 DPSRKIYKFIQKVPIPCYLIALVVGALESRQI-GPRTLVWSEKEQ-VEKSAYEFSETESMLKIAEDLGG-PY--VWGQYD 255 (608)
T ss_dssp CTTEEEEEEEEEEEECGGGCCEEEESCEEEEE-ETTEEEEECHHH-HHHHHHHTTTHHHHHHHHHHHHC-CC--CSSCCE
T ss_pred CCCeEEEEEEecCCcccEEEEEEEeeeeeEec-CCceEEEeChhh-HHHHHHHHHHHHHHHHhHHhcCC-CC--Cchhhc
Confidence 56799999999999999999999999987663 238899999998 88999999999999999999999 99 999999
Q ss_pred EEEe-CCCCCCchhhhhhhhhhccccccccccchhhhhHHHHhhhhhhcCCeeeecc
Q psy2264 91 LVAV-PDFDAGAMENWGMNTYRLGLVVEATHLYLLQHTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 91 ~v~v-p~~~~~~MEn~Gli~~~e~~ll~~~~~~~~~~~~iaHElaHqWfGn~Vt~~~ 146 (148)
+|++ |+|+.||||||||++++++.+..+.. ...+||||+|||||||+||++.
T Consensus 256 ~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~----~~~viaHElAHqWfGnlVT~~~ 308 (608)
T 3u9w_A 256 LLVLPPSFPYGGMENPCLTFVTPTLLAGDKS----LSNVIAHEISHSWTGNLVTNKT 308 (608)
T ss_dssp EEECCTTCSSSEECCTTEEEECGGGCCSSST----TTHHHHHHHHTTTBTTTEEESS
T ss_pred eeeecccccchhhhcCcceeeeeeeecccch----hHHHHHHHhhhhhhcCcCcccc
Confidence 9888 78999999999999999988876543 2357999999999999999654
No 9
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=7.3e-34 Score=240.48 Aligned_cols=122 Identities=16% Similarity=0.241 Sum_probs=105.4
Q ss_pred EEEEecCCCCCceEEEEEEecceeeeecCCceEEEecCccccccHHHHHH-HHHHHHHHHHHHhCCcCCCCCCcccEEEe
Q psy2264 16 TDTFQQSPPMPTYLVGFAVFEFNSLSDKDGKFRVWGREDVVKTQGQYIFD-KGPKILAALSDYMGFDYYKMLPKMDLVAV 94 (148)
Q Consensus 16 ~~~F~~tppmstYl~a~~vg~f~~~~~~~~~i~v~~~~~~~~~~~~~~l~-~~~~~l~~~e~~~g~~y~~p~~k~d~v~v 94 (148)
+++|+.++|||+||+||+||+|+..+. ..++++|++++. .+++.++++ .++++++++|++|| || |++|+|+|++
T Consensus 193 ~~~F~~t~pmstYLva~~vg~f~~~~~-g~~~~v~~~p~~-~~~~~~~~~~~~~~~l~~~e~~fG-pY--P~~k~d~v~~ 267 (632)
T 2xq0_A 193 IYRFEQKVPIPAYLIGIASGDLSSAPI-GPRSTVYTEPFR-LKDCQWEFENDVEKFIQTAEKIIF-EY--EWGTYDILVN 267 (632)
T ss_dssp EEEEEEEEEECGGGCCEEESSCEEEEE-ETTEEEEECHHH-HHHHHHHHTTTHHHHHHHHHHHSC-CC--CSSCCCEEEC
T ss_pred eEEEEeCCccchhheeeeEecceeecc-CCeeEEEEccch-HHHHHHHHHHHHHHHHHHHHHhcc-cC--CcccccEEEE
Confidence 799999999999999999999998874 237999999988 888899998 99999999999999 99 9999999999
Q ss_pred -CCCCCCchhhhhhhhhhccccccccccchhhhhHHHHhhhhhhcCCeeeecc
Q psy2264 95 -PDFDAGAMENWGMNTYRLGLVVEATHLYLLQHTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 95 -p~~~~~~MEn~Gli~~~e~~ll~~~~~~~~~~~~iaHElaHqWfGn~Vt~~~ 146 (148)
|+|+.|||||||++ |.++.++.++.. ...+||||+|||||||+||++.
T Consensus 268 pp~f~~GgMEn~glt-~~~~~ll~~~~~---~~~viaHElAHqWfGnlVT~~~ 316 (632)
T 2xq0_A 268 VDSYPYGGMESPNMT-FATPTLLAHDRS---NIDVIAHELAHSWSGNLVTNCS 316 (632)
T ss_dssp CTTCCSSEECCTTCE-EECGGGCCSSSC---STHHHHHHHHHTTBTTTEEESS
T ss_pred CCCCCCCccccceEE-EeeceeccCchh---HHHHHHHHHHHHHhcCCCccCC
Confidence 59999999999985 555555544321 2457999999999999999653
No 10
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=99.97 E-value=7.3e-33 Score=233.36 Aligned_cols=122 Identities=16% Similarity=0.268 Sum_probs=106.3
Q ss_pred EEEEecCCCCCceEEEEEEecceeeeecCCceEEEecCccccccHHHHHHHHHHHHHHHHHHhCCcCCCCCCcccEEEeC
Q psy2264 16 TDTFQQSPPMPTYLVGFAVFEFNSLSDKDGKFRVWGREDVVKTQGQYIFDKGPKILAALSDYMGFDYYKMLPKMDLVAVP 95 (148)
Q Consensus 16 ~~~F~~tppmstYl~a~~vg~f~~~~~~~~~i~v~~~~~~~~~~~~~~l~~~~~~l~~~e~~~g~~y~~p~~k~d~v~vp 95 (148)
+++|+.++|||+||+||+||+|+..+. ..++++|++++. .++++.+++.+++++++++++|| || |++|||+|++|
T Consensus 193 ~~~f~~t~pmstYl~a~~vg~f~~~~~-g~~~~v~~~p~~-~~~~~~~~~~~~~~l~~~e~~fG-~Y--P~~k~d~v~~p 267 (605)
T 3cia_A 193 DYFFSMPQAIPPYLIAIGVGDLEFKAM-SHQTGIYAESYI-LDAAVAEFDDTQAMIDKAEQMYG-KY--RWGRYDLLMLP 267 (605)
T ss_dssp EEEEEEEEEECGGGCCEEEESCEEEES-SSSEEEEECSTT-HHHHHHHSTTHHHHHHHHHHHHC-CC--TTSCEEEEECC
T ss_pred eEEEeeCCCccceeEEEEEeeeeEecC-CCeEEEEeccCh-HHHHHHHHHHHHHHHHHHHHHhC-CC--CCccccEEEEC
Confidence 689999999999999999999998873 227999999998 88899999999999999999999 99 99999999995
Q ss_pred -CCCCCchhhhhhhhhhccccccccccchhhhhHHHHhhhhhhcCCeeeecc
Q psy2264 96 -DFDAGAMENWGMNTYRLGLVVEATHLYLLQHTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 96 -~~~~~~MEn~Gli~~~e~~ll~~~~~~~~~~~~iaHElaHqWfGn~Vt~~~ 146 (148)
+|+.|||||||+ +|.++.++.++.. ...+||||+|||||||+||++.
T Consensus 268 ~~f~~GgMEn~gl-tf~~~~ll~~~~~---~~~viaHElaHqWfGnlVT~~~ 315 (605)
T 3cia_A 268 PSFPFGGMENPRL-SFITPTVVAGDKS---LVNLIAHELAHSWSGNLVTNES 315 (605)
T ss_dssp TTCSSSEECCTTE-EEECGGGCCSSSC---STHHHHHHHHHTTBTTTEEESS
T ss_pred CccCCCcccCCcE-EEecchhccCcHH---HHHHHHHHHHHHhhccccccCc
Confidence 899999999997 5666666654321 2357999999999999999653
No 11
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.56 E-value=7.3e-15 Score=123.62 Aligned_cols=109 Identities=13% Similarity=0.064 Sum_probs=76.3
Q ss_pred EEEecceeeeecC-C-ceEE--EecCccccccHHHHHHHHHHHHHHHHHHhCCcCCCCCCcccEEEe-CCCCCCchhhhh
Q psy2264 32 FAVFEFNSLSDKD-G-KFRV--WGREDVVKTQGQYIFDKGPKILAALSDYMGFDYYKMLPKMDLVAV-PDFDAGAMENWG 106 (148)
Q Consensus 32 ~~vg~f~~~~~~~-~-~i~v--~~~~~~~~~~~~~~l~~~~~~l~~~e~~~g~~y~~p~~k~d~v~v-p~~~~~~MEn~G 106 (148)
+.+|+|+..+... | ++++ +.+ . ..+.+..++.+++++++++++|| +| |+++|++++. ++...|||||.+
T Consensus 168 v~~G~~~~~~~~~~g~p~~l~v~~~--~-~~d~~~~~~~~~~~~~~~~~~fG-~y--P~~~Y~fl~~~~~~~~GgmEh~~ 241 (597)
T 4fgm_A 168 FLIGDLTIEEFIAHGIKHSLVLSGR--H-YADTSRITADLAKICETQISLFE-EA--PFQSYTFLTMVVGNGFGGLEHRN 241 (597)
T ss_dssp EEEESCEEEEEEETTEEEEEEEESS--C-CCCHHHHHHHHHHHHHHHHHHHT-SC--SCSEEEEEEEEESSCCEEEECSS
T ss_pred hcccCcEEEEeccCCeEEEEEEEcC--C-CCCHHHHHHHHHHHHHHHHHHhC-CC--CCCceEEEEEccCCCCcccccCC
Confidence 3577777666443 3 5554 554 3 33568888999999999999999 99 9999999864 345789999987
Q ss_pred hh--hhhccccccccc--c---chhhhhHHHHhhhhhhcCCeeeecc
Q psy2264 107 MN--TYRLGLVVEATH--L---YLLQHTSMIRMTNIPWFPAWISWKY 146 (148)
Q Consensus 107 li--~~~e~~ll~~~~--~---~~~~~~~iaHElaHqWfGn~Vt~~~ 146 (148)
.. ++.++.+..... . ......+++||++||||||.|+++.
T Consensus 242 st~l~~~~~~l~~~~~~~~~~~~~~~~~liaHE~~H~W~g~~i~p~~ 288 (597)
T 4fgm_A 242 STALLCSRKDLISAHQYEMNDNYQTFLSLCCHEYFHSWNIKTLKPKA 288 (597)
T ss_dssp EEEEEEEGGGSCCTTCCSCCHHHHHHHHHHHHHHHHTTBTTTBCBGG
T ss_pred ceEEEeCchhccccccccchhhhhchhhhHhhhhheeeccccccccc
Confidence 64 355544322111 0 1122347999999999999998653
No 12
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=82.04 E-value=1.2 Score=28.67 Aligned_cols=68 Identities=7% Similarity=-0.084 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHhCCcCCCCCCcccEEEeCCCCCCchhh-----hhhhhhhccccccccccchhhhhHHHHhhhhhhcCC
Q psy2264 66 KGPKILAALSDYMGFDYYKMLPKMDLVAVPDFDAGAMEN-----WGMNTYRLGLVVEATHLYLLQHTSMIRMTNIPWFPA 140 (148)
Q Consensus 66 ~~~~~l~~~e~~~g~~y~~p~~k~d~v~vp~~~~~~MEn-----~Gli~~~e~~ll~~~~~~~~~~~~iaHElaHqWfGn 140 (148)
...++++-+.+..|.+. | ++.++++-..+|.-- -+.|.+....+.. ........++|||++|-=-++
T Consensus 27 ~L~~~~~~l~~~~~~~~--~----~v~v~~~~~~NAf~~g~~~~~~~i~v~~gLl~~--l~~~El~aVlaHElgH~~~~h 98 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--P----TVAIYDSADINAFATGAKRDDSLVAVSTGLLHN--MTRDEAEAVLAHEVSHIANGD 98 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--C----EEEEECCSSEEEEEECCC--CCEEEEEHHHHHH--SCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCC--C----eEEEEECCCcCEEEEecCCCCCEEEEcHHHHhh--CCHHHHHHHHHHHHHHHHCCC
Confidence 45566667777777554 3 455555422122211 1223333222211 011122347999999976655
Q ss_pred e
Q psy2264 141 W 141 (148)
Q Consensus 141 ~ 141 (148)
.
T Consensus 99 ~ 99 (107)
T 3cqb_A 99 M 99 (107)
T ss_dssp E
T ss_pred H
Confidence 4
No 13
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=69.93 E-value=3.2 Score=30.66 Aligned_cols=11 Identities=9% Similarity=-0.082 Sum_probs=8.9
Q ss_pred hHHHHhhhhhh
Q psy2264 127 TSMIRMTNIPW 137 (148)
Q Consensus 127 ~~iaHElaHqW 137 (148)
.+||||++|-=
T Consensus 102 aVLaHElgH~~ 112 (253)
T 3c37_A 102 GVLAHEINHAV 112 (253)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 47999999953
No 14
>2v4b_A Adamts-1; zymogen, protease, hydrolase, metalloprotease, heparin-binding, metalloproteinase, metzincin, glycoprotein metal-binding; 2.00A {Homo sapiens} PDB: 2jih_A 3q2g_A* 3q2h_A*
Probab=68.02 E-value=9.2 Score=28.77 Aligned_cols=12 Identities=0% Similarity=-0.152 Sum_probs=9.8
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|..
T Consensus 144 a~t~AHElGHnl 155 (300)
T 2v4b_A 144 AFTTAHELGHVF 155 (300)
T ss_dssp HHHHHHHHHHHT
T ss_pred eehhhhhhhhhc
Confidence 457999999975
No 15
>2rjp_A Adamts-4; metalloprotease domain, aggrecanase, cleavage on PAIR of basic residues, extracellular matrix, glycoprotein, hydrolase, metal-binding; HET: 886; 2.80A {Homo sapiens} PDB: 3b2z_A
Probab=67.40 E-value=12 Score=28.48 Aligned_cols=12 Identities=0% Similarity=-0.128 Sum_probs=9.8
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|..
T Consensus 144 a~t~AHElGHnl 155 (316)
T 2rjp_A 144 AFTAAHQLGHVF 155 (316)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhc
Confidence 457999999974
No 16
>2rjq_A Adamts-5; metalloprotease domain, aggrecanase, cleavage on PAIR of BAS residues, extracellular matrix, glycoprotein, hydrolase, ME binding; HET: NAG BAT; 2.60A {Homo sapiens}
Probab=58.71 E-value=12 Score=29.11 Aligned_cols=12 Identities=0% Similarity=-0.205 Sum_probs=9.8
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|..
T Consensus 144 a~~~AHElGHnl 155 (378)
T 2rjq_A 144 AFTVAHEIGHLL 155 (378)
T ss_dssp HHHHHHHHHHHT
T ss_pred hhhhhhhhhhhc
Confidence 457999999974
No 17
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=54.65 E-value=4 Score=30.03 Aligned_cols=11 Identities=0% Similarity=-0.157 Sum_probs=9.4
Q ss_pred hHHHHhhhhhh
Q psy2264 127 TSMIRMTNIPW 137 (148)
Q Consensus 127 ~~iaHElaHqW 137 (148)
.++||||+|.+
T Consensus 184 ~~~AHElGHnl 194 (257)
T 2ddf_A 184 LVTTHELGHNF 194 (257)
T ss_dssp HHHHHHHHHHT
T ss_pred eeeeeehhhhc
Confidence 46899999986
No 18
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=54.29 E-value=4.1 Score=28.73 Aligned_cols=12 Identities=0% Similarity=-0.108 Sum_probs=9.7
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|+.
T Consensus 134 a~~~AHElGH~l 145 (197)
T 1bud_A 134 AITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhhc
Confidence 346999999985
No 19
>2cki_A Ulilysin; metalloprotease, hydrolase; HET: ARG; 1.7A {Methanosarcina acetivorans} PDB: 2j83_A* 3lum_A* 3lun_A*
Probab=53.34 E-value=4.5 Score=30.28 Aligned_cols=17 Identities=12% Similarity=0.483 Sum_probs=12.7
Q ss_pred hHHHHhhhhhhcCCeeee
Q psy2264 127 TSMIRMTNIPWFPAWISW 144 (148)
Q Consensus 127 ~~iaHElaHqWfGn~Vt~ 144 (148)
..++||+.| |+|=+=||
T Consensus 164 ~TltHEvGH-~LGL~HtF 180 (262)
T 2cki_A 164 RTATHEIGH-WLNLYHIW 180 (262)
T ss_dssp HHHHHHHHH-HTTCCCTT
T ss_pred chhhhhhhh-hhcceeec
Confidence 479999998 77755444
No 20
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=53.06 E-value=4.4 Score=28.72 Aligned_cols=12 Identities=8% Similarity=-0.067 Sum_probs=9.7
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|+.
T Consensus 137 a~~~AHElGHnl 148 (202)
T 1atl_A 137 GVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHT
T ss_pred EEEehhhhcccc
Confidence 346999999984
No 21
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=52.99 E-value=18 Score=25.74 Aligned_cols=12 Identities=8% Similarity=0.022 Sum_probs=9.8
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|..
T Consensus 137 a~~~AHElGHnl 148 (214)
T 1r55_A 137 AATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 357999999975
No 22
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=52.79 E-value=4.5 Score=28.52 Aligned_cols=12 Identities=8% Similarity=-0.050 Sum_probs=9.7
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|+.
T Consensus 136 a~~~AHElGH~l 147 (197)
T 1qua_A 136 AVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 346999999984
No 23
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=51.10 E-value=3.5 Score=27.64 Aligned_cols=10 Identities=10% Similarity=0.076 Sum_probs=8.6
Q ss_pred HHHHhhhhhh
Q psy2264 128 SMIRMTNIPW 137 (148)
Q Consensus 128 ~iaHElaHqW 137 (148)
+++||+||..
T Consensus 92 tvvHEiaHhf 101 (130)
T 2ejq_A 92 TMLHELRHHL 101 (130)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHhHHHH
Confidence 5899999975
No 24
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=50.77 E-value=5.1 Score=28.37 Aligned_cols=12 Identities=8% Similarity=-0.050 Sum_probs=9.6
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|..
T Consensus 137 a~~~AHElGH~l 148 (202)
T 2w15_A 137 AVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHhhhc
Confidence 346999999984
No 25
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=49.89 E-value=5.3 Score=28.29 Aligned_cols=12 Identities=8% Similarity=-0.119 Sum_probs=9.7
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|+.
T Consensus 136 a~~~AHElGH~l 147 (202)
T 1yp1_A 136 AVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 346999999984
No 26
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=49.06 E-value=5.1 Score=30.67 Aligned_cols=35 Identities=6% Similarity=0.012 Sum_probs=20.5
Q ss_pred hhhhhhccccccccccc-hhhhhHHHHhhhhhhcCC
Q psy2264 106 GMNTYRLGLVVEATHLY-LLQHTSMIRMTNIPWFPA 140 (148)
Q Consensus 106 Gli~~~e~~ll~~~~~~-~~~~~~iaHElaHqWfGn 140 (148)
|+..-+...++.+.... ..+...+||||+|-+++.
T Consensus 76 G~~~~~~~~I~LN~~~~~~rqrFTLAHELGHllLh~ 111 (301)
T 3dte_A 76 GAYDPEHHVILINSQVRPERQRFTLAHEISHALLLG 111 (301)
T ss_dssp EEEETTTTEEEEETTSCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcEEEEcCCCChhhHHHHHHHHHHHHHhcc
Confidence 44332333444444333 234567999999998875
No 27
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=49.03 E-value=30 Score=27.49 Aligned_cols=12 Identities=8% Similarity=-0.058 Sum_probs=9.9
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|++
T Consensus 147 a~t~AHElGHnl 158 (427)
T 2ero_A 147 AIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 346999999985
No 28
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=48.74 E-value=5.7 Score=28.19 Aligned_cols=11 Identities=9% Similarity=-0.024 Sum_probs=9.2
Q ss_pred hHHHHhhhhhh
Q psy2264 127 TSMIRMTNIPW 137 (148)
Q Consensus 127 ~~iaHElaHqW 137 (148)
.++||||+|..
T Consensus 140 ~~~AHElGH~l 150 (203)
T 1kuf_A 140 VTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHhhhhc
Confidence 46999999984
No 29
>3b8z_A Protein adamts-5; alpha/beta, hydrolase; HET: 294; 1.40A {Homo sapiens} PDB: 3hyg_A* 3hy9_A* 3hy7_A* 3ljt_A*
Probab=46.80 E-value=6.4 Score=28.15 Aligned_cols=12 Identities=0% Similarity=-0.205 Sum_probs=9.7
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|..
T Consensus 142 a~~~AHElGHnl 153 (217)
T 3b8z_A 142 AFTVAHEIGHLL 153 (217)
T ss_dssp HHHHHHHHHHHT
T ss_pred hhhhHhhhhhhc
Confidence 357999999974
No 30
>2i47_A ADAM 17; TACE-inhibitor complex, hydrolase; HET: INN KGY; 1.90A {Homo sapiens} SCOP: d.92.1.10 PDB: 3g42_A*
Probab=46.48 E-value=6.4 Score=29.49 Aligned_cols=11 Identities=0% Similarity=-0.157 Sum_probs=9.4
Q ss_pred hHHHHhhhhhh
Q psy2264 127 TSMIRMTNIPW 137 (148)
Q Consensus 127 ~~iaHElaHqW 137 (148)
.++||||+|.+
T Consensus 190 ~~~AHElGHnl 200 (288)
T 2i47_A 190 LVTTHELGHNF 200 (288)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhhc
Confidence 46999999985
No 31
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=45.62 E-value=4.5 Score=26.42 Aligned_cols=9 Identities=0% Similarity=0.025 Sum_probs=7.8
Q ss_pred HHHHhhhhh
Q psy2264 128 SMIRMTNIP 136 (148)
Q Consensus 128 ~iaHElaHq 136 (148)
+++||+||.
T Consensus 93 vvvhEiahh 101 (114)
T 3e11_A 93 TVVHEIAHH 101 (114)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 589999996
No 32
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=43.56 E-value=48 Score=25.25 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCCCCcccEEEeCCCCCCchhh--h--hhhhhhccccccccccchhhhhHHHHhhhh
Q psy2264 60 GQYIFDKGPKILAALSDYMGFDYYKMLPKMDLVAVPDFDAGAMEN--W--GMNTYRLGLVVEATHLYLLQHTSMIRMTNI 135 (148)
Q Consensus 60 ~~~~l~~~~~~l~~~e~~~g~~y~~p~~k~d~v~vp~~~~~~MEn--~--Gli~~~e~~ll~~~~~~~~~~~~iaHElaH 135 (148)
+.-+.--+.+..+++.+.||. - ++.. .++..-.+. ...+| | ..++|....-... ......+++||++|
T Consensus 73 ~~DAhy~a~~~~d~y~~~~gr-~--~id~-~l~~~Vhyg-~~y~NAfWdG~~M~fGDG~~~~~---p~~~lDVv~HE~tH 144 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFGT-S--PLTH-KLYMKVHYG-RSVENAYWDGTAMLFGDGATMFY---PLVSLDVAAHEVSH 144 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS-C--SSSS-CEEEEESCT-TTCCCEEECSSCEEECCCCSSBS---CSCCHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcCC-C--CCCC-ceEEEEecC-CCccCcEecCcEEEeeCCCcccc---cccccceeeecccc
Confidence 345556678899999999993 3 5542 233333332 23334 2 1223332211100 11234579999999
Q ss_pred hh
Q psy2264 136 PW 137 (148)
Q Consensus 136 qW 137 (148)
--
T Consensus 145 GV 146 (301)
T 1u4g_A 145 GF 146 (301)
T ss_dssp HH
T ss_pred ce
Confidence 54
No 33
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=41.25 E-value=8.5 Score=30.74 Aligned_cols=11 Identities=9% Similarity=-0.115 Sum_probs=9.4
Q ss_pred hHHHHhhhhhh
Q psy2264 127 TSMIRMTNIPW 137 (148)
Q Consensus 127 ~~iaHElaHqW 137 (148)
.++||||+|+.
T Consensus 141 ~t~AHElGHnl 151 (427)
T 2e3x_A 141 VIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHTT
T ss_pred eehHHHHHHhh
Confidence 46999999985
No 34
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=38.46 E-value=9.9 Score=30.27 Aligned_cols=12 Identities=8% Similarity=-0.122 Sum_probs=9.7
Q ss_pred hhHHHHhhhhhh
Q psy2264 126 HTSMIRMTNIPW 137 (148)
Q Consensus 126 ~~~iaHElaHqW 137 (148)
..++||||+|+.
T Consensus 138 a~t~AHElGHnl 149 (419)
T 2dw0_A 138 AVIMAHEMGHNL 149 (419)
T ss_dssp HHHHHHHHHHHT
T ss_pred hhhHHHHHHHHc
Confidence 346999999985
No 35
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=36.98 E-value=53 Score=25.87 Aligned_cols=10 Identities=0% Similarity=-0.014 Sum_probs=8.6
Q ss_pred hHHHHhhhhh
Q psy2264 127 TSMIRMTNIP 136 (148)
Q Consensus 127 ~~iaHElaHq 136 (148)
.++||||+|.
T Consensus 141 ~t~AHElGHn 150 (397)
T 3k7n_A 141 STITHELGHN 150 (397)
T ss_dssp HHHHHHHHHH
T ss_pred hhHHHHHHHH
Confidence 4699999996
No 36
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=36.51 E-value=61 Score=26.51 Aligned_cols=11 Identities=0% Similarity=-0.055 Sum_probs=8.9
Q ss_pred hhHHHHhhhhh
Q psy2264 126 HTSMIRMTNIP 136 (148)
Q Consensus 126 ~~~iaHElaHq 136 (148)
..++||||+|.
T Consensus 135 A~t~AHELGHn 145 (510)
T 3g5c_A 135 AVTLAQSLAHN 145 (510)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 34699999995
No 37
>4dd8_A Disintegrin and metalloproteinase domain-containi 8; batimastat, inflammation, alpha/beta motif, metalloproteinas allergic asthma, tumorigenesis; HET: BAT; 2.10A {Homo sapiens}
Probab=33.89 E-value=13 Score=26.39 Aligned_cols=10 Identities=10% Similarity=-0.004 Sum_probs=8.6
Q ss_pred hHHHHhhhhh
Q psy2264 127 TSMIRMTNIP 136 (148)
Q Consensus 127 ~~iaHElaHq 136 (148)
.++||||+|.
T Consensus 135 ~~~AHElGH~ 144 (208)
T 4dd8_A 135 CTMAHEMGHN 144 (208)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4699999996
No 38
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=32.33 E-value=95 Score=23.59 Aligned_cols=21 Identities=10% Similarity=-0.042 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q psy2264 60 GQYIFDKGPKILAALSDYMGF 80 (148)
Q Consensus 60 ~~~~l~~~~~~l~~~e~~~g~ 80 (148)
+..+..-+.+..+++.+.||.
T Consensus 67 avdA~~~~~~t~d~y~~~~gr 87 (301)
T 1bqb_A 67 GVDANYYAKQTYDYYKNTFGR 87 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 345666788999999999993
No 39
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=32.29 E-value=54 Score=26.08 Aligned_cols=11 Identities=9% Similarity=-0.027 Sum_probs=9.0
Q ss_pred hHHHHhhhhhh
Q psy2264 127 TSMIRMTNIPW 137 (148)
Q Consensus 127 ~~iaHElaHqW 137 (148)
.++||||+|..
T Consensus 146 ~t~AHElGHnl 156 (422)
T 3k7l_A 146 ITMAHEMGHNL 156 (422)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 46999999963
No 40
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=28.24 E-value=19 Score=24.28 Aligned_cols=21 Identities=14% Similarity=0.059 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHhCCcC
Q psy2264 62 YIFDKGPKILAALSDYMGFDY 82 (148)
Q Consensus 62 ~~l~~~~~~l~~~e~~~g~~y 82 (148)
...+.+.++++..++...+.+
T Consensus 25 ~~~~~i~~A~~~W~~~t~l~F 45 (160)
T 2jsd_A 25 EVDKAVEMALQAWSSAVPLSF 45 (160)
T ss_dssp HHHHHHHHHHHHHHHHSSCEE
T ss_pred HHHHHHHHHHHHHHccCCeeE
Confidence 335677888899999887665
No 41
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=27.37 E-value=1.6e+02 Score=22.38 Aligned_cols=71 Identities=14% Similarity=0.046 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcCCCCCCcccEEEeCCCC---CCchhhhhhhhhhccccccccccchhhhhHHHHhhhhh
Q psy2264 60 GQYIFDKGPKILAALSDYMGFDYYKMLPKMDLVAVPDFD---AGAMENWGMNTYRLGLVVEATHLYLLQHTSMIRMTNIP 136 (148)
Q Consensus 60 ~~~~l~~~~~~l~~~e~~~g~~y~~p~~k~d~v~vp~~~---~~~MEn~Gli~~~e~~ll~~~~~~~~~~~~iaHElaHq 136 (148)
+.-+.--+.+..+++.++||. = ++. ..++..-.+. .+|-=+-..++|....-... +.....+++||++|-
T Consensus 74 ~~DAhy~a~~t~d~y~~~~gr-~--~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~---~~~slDVv~HE~tHG 146 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLGT-A--PLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFY---PLVSLDVSAHEVSHG 146 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS-C--SSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBS---CSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCC-C--CCC-CceEEEEecCCCccCccccCCEEEEeCCCcccc---cccccchhhhhhccc
Confidence 455566778899999999993 3 554 1222222221 11211222334433221111 112345799999995
Q ss_pred h
Q psy2264 137 W 137 (148)
Q Consensus 137 W 137 (148)
-
T Consensus 147 v 147 (306)
T 3nqx_A 147 F 147 (306)
T ss_dssp H
T ss_pred c
Confidence 3
No 42
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=26.71 E-value=20 Score=27.46 Aligned_cols=22 Identities=14% Similarity=0.043 Sum_probs=17.9
Q ss_pred cHHHHHHHHHHHHHHHHHHhCC
Q psy2264 59 QGQYIFDKGPKILAALSDYMGF 80 (148)
Q Consensus 59 ~~~~~l~~~~~~l~~~e~~~g~ 80 (148)
.+..+..-+.+..++|.+.||.
T Consensus 62 aavdA~~~~~~t~d~y~~~~gr 83 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFGR 83 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 3556777888999999999994
No 43
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A
Probab=25.04 E-value=24 Score=28.72 Aligned_cols=14 Identities=0% Similarity=-0.365 Sum_probs=10.7
Q ss_pred hHHHHhhhhhhcCC
Q psy2264 127 TSMIRMTNIPWFPA 140 (148)
Q Consensus 127 ~~iaHElaHqWfGn 140 (148)
.++|||++|-=-|+
T Consensus 331 aVlaHElgH~~~~~ 344 (482)
T 4aw6_A 331 AVLGHELGHWKLGH 344 (482)
T ss_dssp HHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHccc
Confidence 36999999975554
No 44
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=24.40 E-value=24 Score=25.52 Aligned_cols=11 Identities=0% Similarity=0.108 Sum_probs=8.7
Q ss_pred HHHHhhhhhhc
Q psy2264 128 SMIRMTNIPWF 138 (148)
Q Consensus 128 ~iaHElaHqWf 138 (148)
++.||++|-|.
T Consensus 51 v~~HElgH~~~ 61 (224)
T 3b4r_A 51 VVLHELGHSYV 61 (224)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 47899999864
No 45
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=24.02 E-value=25 Score=23.83 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHhCCcC
Q psy2264 63 IFDKGPKILAALSDYMGFDY 82 (148)
Q Consensus 63 ~l~~~~~~l~~~e~~~g~~y 82 (148)
..+.++++++.-++...+.+
T Consensus 28 ~~~~i~~A~~~W~~~~~l~F 47 (159)
T 2ovx_A 28 IDDAFARAFALWSAVTPLTF 47 (159)
T ss_dssp HHHHHHHHHHHHHTSSSCEE
T ss_pred HHHHHHHHHHHHHccCCeeE
Confidence 34566777888887765444
No 46
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=23.75 E-value=25 Score=24.10 Aligned_cols=21 Identities=10% Similarity=0.078 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHhCCcC
Q psy2264 62 YIFDKGPKILAALSDYMGFDY 82 (148)
Q Consensus 62 ~~l~~~~~~l~~~e~~~g~~y 82 (148)
...+.+.++++..++...+.+
T Consensus 30 ~~~~~i~~A~~~W~~~t~l~F 50 (173)
T 1hy7_A 30 AVDSAVEKALKVWEEVTPLTF 50 (173)
T ss_dssp HHHHHHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHHHHhCCCcce
Confidence 334567788888888877655
No 47
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=23.65 E-value=25 Score=23.98 Aligned_cols=20 Identities=10% Similarity=0.071 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHhCCcC
Q psy2264 63 IFDKGPKILAALSDYMGFDY 82 (148)
Q Consensus 63 ~l~~~~~~l~~~e~~~g~~y 82 (148)
..+.++++++..++...+.+
T Consensus 29 ~~~~i~~A~~~W~~~t~l~F 48 (168)
T 1cge_A 29 VDHAIEKAFQLWSNVTPLTF 48 (168)
T ss_dssp HHHHHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHHhhccCcee
Confidence 34567788888888876554
No 48
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=23.62 E-value=25 Score=27.10 Aligned_cols=22 Identities=0% Similarity=-0.278 Sum_probs=18.1
Q ss_pred cHHHHHHHHHHHHHHHHHHhCC
Q psy2264 59 QGQYIFDKGPKILAALSDYMGF 80 (148)
Q Consensus 59 ~~~~~l~~~~~~l~~~e~~~g~ 80 (148)
.+..+..-+.+..++|.+.||.
T Consensus 69 aavdA~~~~~~t~d~y~~~~gr 90 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHNR 90 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 3466777888999999999993
No 49
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=23.40 E-value=26 Score=23.82 Aligned_cols=21 Identities=14% Similarity=-0.012 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHhCCcC
Q psy2264 62 YIFDKGPKILAALSDYMGFDY 82 (148)
Q Consensus 62 ~~l~~~~~~l~~~e~~~g~~y 82 (148)
...+.++++++..++..++.+
T Consensus 28 ~~~~~i~~A~~~W~~~~~l~F 48 (167)
T 2xs4_A 28 ERENAIRSAFALWSDKSTLSF 48 (167)
T ss_dssp HHHHHHHHHHHHHHHTSSCEE
T ss_pred HHHHHHHHHHHHHhccCCceE
Confidence 344667788888888876554
No 50
>4axq_A Archaemetzincin; metalloprotease, protease, hydrolase, metal-bindi; 1.40A {Archaeoglobus fulgidus} PDB: 2xhq_A 3zvs_A 4a3w_A*
Probab=23.34 E-value=29 Score=23.93 Aligned_cols=9 Identities=0% Similarity=-0.108 Sum_probs=7.8
Q ss_pred HHHHhhhhh
Q psy2264 128 SMIRMTNIP 136 (148)
Q Consensus 128 ~iaHElaHq 136 (148)
.++||++|.
T Consensus 117 ~~~HElGH~ 125 (163)
T 4axq_A 117 EAVHEIGHV 125 (163)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 489999997
No 51
>3khi_A Putative metal-dependent hydrolase; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; 1.95A {Klebsiella pneumoniae subsp} PDB: 3dl1_A
Probab=23.12 E-value=26 Score=26.29 Aligned_cols=9 Identities=0% Similarity=-0.067 Sum_probs=8.1
Q ss_pred HHHHhhhhh
Q psy2264 128 SMIRMTNIP 136 (148)
Q Consensus 128 ~iaHElaHq 136 (148)
++.||+||+
T Consensus 147 vvIHEFAHk 155 (267)
T 3khi_A 147 LVVHEVAHK 155 (267)
T ss_dssp HHHHHHHHH
T ss_pred hHHhHHHHH
Confidence 589999997
No 52
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=22.42 E-value=27 Score=27.18 Aligned_cols=22 Identities=5% Similarity=-0.182 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCc
Q psy2264 60 GQYIFDKGPKILAALSDYMGFD 81 (148)
Q Consensus 60 ~~~~l~~~~~~l~~~e~~~g~~ 81 (148)
+..+..-+.+..++|.+.||..
T Consensus 90 v~~ay~~~~~t~d~y~~~~grn 111 (341)
T 2vqx_A 90 VDEAYDYLGVTYDFFWQAFKRN 111 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCC
Confidence 4556777888999999999943
No 53
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=20.77 E-value=31 Score=23.38 Aligned_cols=20 Identities=10% Similarity=0.172 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHhCCcC
Q psy2264 63 IFDKGPKILAALSDYMGFDY 82 (148)
Q Consensus 63 ~l~~~~~~l~~~e~~~g~~y 82 (148)
..+.++++++..++..++.+
T Consensus 30 ~~~~i~~A~~~W~~~t~l~F 49 (165)
T 1hv5_A 30 VRQTVAEALQVWSEVTPLTF 49 (165)
T ss_dssp HHHHHHHHHHHHHTTSSCEE
T ss_pred HHHHHHHHHHHHHcccCeeE
Confidence 34567788888888776554
Done!