BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2266
(313 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 89/148 (60%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLF 204
P F +AE T+ TNFF VC L PL++P RVVNV+S + + S EL+Q
Sbjct: 99 PTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 158
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E++TE++L+ +M +V+ K+G ++ GWP +Y V+K+GV LS I LS+ ++
Sbjct: 159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD 218
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I++N PG+V TD+ K +PE+G
Sbjct: 219 KILLNACCPGWVRTDMAGPKATKSPEEG 246
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFGQRAETTLATNFFA 70
RFHQLDI D SI L D ++ ++GGLD+LVNNAGI ++ P F +AE T+ TNFF
Sbjct: 57 RFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG 116
Query: 71 LVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ 129
VC L PL++P RVVNV+S + + S EL+Q +E++TE++L+ +M +V+
Sbjct: 117 TRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 88/148 (59%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLF 204
P F +AE T+ TNFF V L PL++P RVVNV+S + + S EL+Q
Sbjct: 99 PTPFHIQAEVTMKTNFFGTRDVXTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 158
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E++TE++L+ +M +V+ K+G ++ GWP +Y V+K+GV LS I LS+ ++
Sbjct: 159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGD 218
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I++N PG+V TD+ K +PE+G
Sbjct: 219 KILLNACCPGWVRTDMAGPKATKSPEEG 246
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 77/120 (64%), Gaps = 2/120 (1%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFGQRAETTLATNFFA 70
RFHQLDI D SI L D ++ ++GGLD+LVNNAGI ++ P F +AE T+ TNFF
Sbjct: 57 RFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFG 116
Query: 71 LVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ 129
V L PL++P RVVNV+S + + S EL+Q +E++TE++L+ +M +V+
Sbjct: 117 TRDVXTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 1/148 (0%)
Query: 146 PGSFGQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS-KLGMLYNVPSQELRQTLF 204
P F +AE TL TNFFA +C+ L P+++PH RVVN++S + + S++L++
Sbjct: 97 PMPFDIKAEMTLKTNFFATRNMCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFH 156
Query: 205 NESLTEDQLLDMMTDYVQLAKEGKDKEAGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRP 264
+E+LTE L+D+M +V+ K + GWP Y VSKLGV LS I L + ++
Sbjct: 157 SETLTEGDLVDLMKKFVEDTKNEVHEREGWPNSPYGVSKLGVTVLSRILARRLDEKRKAD 216
Query: 265 DIIVNPVHPGYVNTDLTEHKGVLTPEQG 292
I+VN PG V TD+ + T E+G
Sbjct: 217 RILVNACCPGPVKTDMDGKDSIRTVEEG 244
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/120 (42%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFGQRAETTLATNFFA 70
RFHQLDI D SI L D ++ ++GGL++LVNNA + ++ P F +AE TL TNFFA
Sbjct: 55 RFHQLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDIKAEMTLKTNFFA 114
Query: 71 LVTVCHILFPLLRPHARVVNVAS-KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ 129
+C+ L P+++PH RVVN++S + + S++L++ +E+LTE L+D+M +V+
Sbjct: 115 TRNMCNELLPIMKPHGRVVNISSLQCLRAFENCSEDLQERFHSETLTEGDLVDLMKKFVE 174
>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase
20beta-Hydroxysteroid Dehydrogenase
Length = 288
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 102/181 (56%), Gaps = 8/181 (4%)
Query: 119 QLLDMMTDYVQYN-GPLDKILDTA-----MDTAPGSFGQRAETTLATNFFALVTVCHILF 172
Q + + D+++ G LD +++ A +D P F +AE T+ TNF VC L
Sbjct: 67 QSIRALCDFLRKEYGGLDVLVNNAAIAFQLDN-PTPFHIQAELTMKTNFMGTRNVCTELL 125
Query: 173 PLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231
PL++P RVVNV+S G+ N S EL+Q +E++TE++L+ +M +V+ K G ++
Sbjct: 126 PLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHRK 185
Query: 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
GW + +Y V+K+GV+ LS I L + + I++N PG+V TD+ K +PE
Sbjct: 186 EGWSDSTYGVTKIGVSVLSRIYARKLREQRAGDKILLNACCPGWVRTDMGGPKAPKSPEV 245
Query: 292 G 292
G
Sbjct: 246 G 246
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-YRDTAPGSFGQRAETTLATNFFA 70
RFHQLDI+D SI L D ++ ++GGLD+LVNNA I ++ P F +AE T+ TNF
Sbjct: 57 RFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIAFQLDNPTPFHIQAELTMKTNFMG 116
Query: 71 LVTVCHILFPLLRPHARVVNVASKLGM-LYNVPSQELRQTLFNESLTEDQLLDMMTDYVQ 129
VC L PL++P RVVNV+S G+ N S EL+Q +E++TE++L+ +M +V+
Sbjct: 117 TRNVCTELLPLIKPQGRVVNVSSTEGVRALNECSPELQQKFKSETITEEELVGLMNKFVE 176
>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver
Somniferum
Length = 311
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 36/161 (22%)
Query: 1 QKVCKNNNNNVRFHQLDILDQ-SSIHKLHDDIQTQHGGLDLLVNNAGI------------ 47
+K+ +N+ NV FHQLD+ D +++ L D I+T G LD+LVNNAG+
Sbjct: 54 EKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKA 113
Query: 48 -YRDTAPGSFG------------------QRAETTLATNFFALVTVCHILFPLLR--PHA 86
D S + AE L N+ + +V +L PLL+
Sbjct: 114 MISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSP 173
Query: 87 RVVNVASKLGMLYNVPSQELRQTLFN-ESLTEDQLLDMMTD 126
R+VNV+S G L V ++ + L + ++LTE++ +DM+ +
Sbjct: 174 RIVNVSSSTGSLKYVSNETALEILGDGDALTEER-IDMVVN 213
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 14/186 (7%)
Query: 114 SLTEDQLLDMMTDYVQYNGPLDKILDT--AMDTAPGSFGQRAETTLATNFFALVTVCHIL 171
S+ D+ M++D + + L KI + A + ++ + AE L N+ + +V +L
Sbjct: 105 SVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETY-ELAEECLKINYNGVKSVTEVL 163
Query: 172 FPLLR--PHARVVNVASKLGMLYNVPSQELRQTLFN-ESLTEDQLLDMMTDYVQLAKEGK 228
PLL+ R+VNV+S G L V ++ + L + ++LTE+++ ++ ++ KE
Sbjct: 164 IPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENL 223
Query: 229 DKEAGWPEF--SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGV 286
+ GWP F +Y+ SK + + T + P VN V PG V T++ G
Sbjct: 224 IETNGWPSFGAAYTTSK------ACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYGIGN 277
Query: 287 LTPEQG 292
T E+G
Sbjct: 278 YTAEEG 283
>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|B Chain B, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|C Chain C, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
pdb|3GRP|D Chain D, 2.1 Angstrom Crystal Structure Of
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From
Bartonella Henselae
Length = 266
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF---- 56
+++ + +V ++ D+ SI +L + + + G+D+LVNNAGI RD G F
Sbjct: 65 KEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRD---GLFVRMQ 121
Query: 57 GQRAETTLATNFFALVTVCHILF--PLLRPHARVVNVASKLGMLYNVPSQ 104
Q + LA N A T+ L + R + R++N+ S +G++ N P Q
Sbjct: 122 DQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-PGQ 170
>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASU|B Chain B, Crystal Structure Of Serine Dehydrogenase From Escherichia
Coli
pdb|3ASV|A Chain A, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|B Chain B, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|C Chain C, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|D Chain D, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|E Chain E, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
pdb|3ASV|F Chain F, The Closed Form Of Serine Dehydrogenase Complexed With
Nadp+
Length = 248
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG--QRAETTLA 65
+N+ QLD+ ++++I ++ + + +D+LVNNAG+ P + ET +
Sbjct: 45 GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMID 104
Query: 66 TNFFALVTVCHILFPLL--RPHARVVNVASKLG 96
TN LV + + P + R H ++N+ S G
Sbjct: 105 TNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG 137
>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2PNF|B Chain B, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier
Protein) Reductase
pdb|2P68|A Chain A, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
pdb|2P68|B Chain B, Crystal Structure Of Aq_1716 From Aquifex Aeolicus Vf5
Length = 248
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 7 NNNNVRFH--QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA---- 60
N V+ H ++++L + SI+K ++I G+D+LVNNAGI RD F + +
Sbjct: 53 NKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL---FLRMSLLDW 109
Query: 61 ETTLATNFFA--LVTVCHILFPLLRPHARVVNVASKLGMLYNV 101
E L N LVT + + + R+VN++S +G NV
Sbjct: 110 EEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV 152
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 10/62 (16%)
Query: 236 EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQGKIR 295
+ +YS +K G+ + F + +L+K+ +++VN V PG++ TD+T VL+ E I+
Sbjct: 154 QVNYSTTKAGL--IGFTK--SLAKELAPRNVLVNAVAPGFIETDMT---AVLSEE---IK 203
Query: 296 QK 297
QK
Sbjct: 204 QK 205
>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|B Chain B, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|C Chain C, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|D Chain D, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|E Chain E, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|F Chain F, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|G Chain G, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1I01|H Chain H, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein]
Reductase From E. Coli.
pdb|1Q7B|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|C Chain C, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
pdb|1Q7B|D Chain D, The Structure Of Betaketoacyl-[acp] Reductase From E. Coli
In Complex With Nadp+
Length = 244
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAETTL 64
N + L++ D +SI + + I+ + G +D+LVNNAGI RD + ET L
Sbjct: 52 NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNL 111
Query: 65 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
++ F V + + H R++ + S +G + N
Sbjct: 112 SSVFRLSKAVMRAMMK--KRHGRIITIGSVVGTMGN 145
>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
pdb|1Q7C|B Chain B, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant
In Complex With Nadph Fragment
Length = 244
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAETTL 64
N + L++ D +SI + + I+ + G +D+LVNNAGI RD + ET L
Sbjct: 52 NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNL 111
Query: 65 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
++ F V + + H R++ + S +G + N
Sbjct: 112 SSVFRLSKAVMRAMMK--KRHGRIITIGSVVGTMGN 145
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAET 62
+N + L++ + SI + I + GG+D+LVNNAGI RD + ET
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMET 116
Query: 63 TLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYN 100
L T+ F L +L +++ R++NV S +G + N
Sbjct: 117 NL-TSIFRLSKA--VLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RSH|B Chain B, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase
(Fabg) From Vibrio Cholerae O1 Complexed With Nadp+
(Space Group P62)
pdb|3RRO|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|3RRO|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg) From Vibrio Cholerae
pdb|4I08|A Chain A, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
pdb|4I08|B Chain B, Crystal Structure Of Beta-Ketoacyl-Acyl Carrier Protein
Reductase (Fabg) From Vibrio Cholerae In Complex With
Nadph
Length = 251
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAET 62
+N + L++ + SI + I + GG+D+LVNNAGI RD + ET
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMET 116
Query: 63 TLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYN 100
L T+ F L +L +++ R++NV S +G + N
Sbjct: 117 NL-TSIFRLSKA--VLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
pdb|3TZC|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(Y155f) From Vibrio Cholerae
Length = 251
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAET 62
+N + L++ + SI + I + GG+D+LVNNAGI RD + ET
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMET 116
Query: 63 TLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYN 100
L T+ F L +L +++ R++NV S +G + N
Sbjct: 117 NL-TSIFRLSKA--VLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|B Chain B, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|C Chain C, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
pdb|3EMK|D Chain D, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
From Brucella Melitensis
Length = 246
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 20 DQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA----ETTLATNFFALVTVC 75
D+ ++ L + + GG+D+LVNNAGI RD G F + + + L N ++ +
Sbjct: 64 DREAVKALGQKAEEEMGGVDILVNNAGITRD---GLFVRMSDEDWDAVLTVNLTSVFNLT 120
Query: 76 HIL-FPLL-RPHARVVNVASKLGMLYNVPSQ 104
L P++ R + R++N+ S +G+ N P Q
Sbjct: 121 RELTHPMMRRRNGRIINITSIVGVTGN-PGQ 150
>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|B Chain B, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|C Chain C, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
pdb|3ENN|D Chain D, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE
FROM BRUCELLA Melitensis (P43212)
Length = 249
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA----ETTLATNFFALV 72
++ D+ ++ L + + GG+D+LVNNAGI RD G F + + + L N ++
Sbjct: 64 NLSDREAVKALGQKAEEEMGGVDILVNNAGITRD---GLFVRMSDEDWDAVLTVNLTSVF 120
Query: 73 TVCHIL-FPLL-RPHARVVNVASKLGMLYNVPSQ 104
+ L P++ R + R++N+ S +G+ N P Q
Sbjct: 121 NLTRELTHPMMRRRNGRIINITSIVGVTGN-PGQ 153
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFFALVTVC 75
D+ + I ++ + I T+H +D+LVNNAGI RD E L TN +L +
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYIT 160
Query: 76 HILFPLL--RPHARVVNVASKLGMLYNV 101
+ + + R++N++S +G+ NV
Sbjct: 161 QPISKRMINNRYGRIINISSIVGLTGNV 188
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%), Gaps = 4/45 (8%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
+YS SK GV + F + +L+K+ +I VN + PG++++D+T+
Sbjct: 192 NYSSSKAGV--IGFTK--SLAKELASRNITVNAIAPGFISSDMTD 232
>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
pdb|1K2W|B Chain B, Crystal Structure Of Sorbitol Dehydrogenase From R.
Sphaeroides
Length = 256
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLAT--NFFALVT 73
LD+ DQ+SI + ++ + G +D+LVNNA ++ D AP E T + FA +
Sbjct: 58 LDVTDQASIDRCVAELLDRWGSIDILVNNAALF-DLAP-----IVEITRESYDRLFA-IN 110
Query: 74 VCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQ 108
V LF +++ AR + + G + N+ SQ R+
Sbjct: 111 VSGTLF-MMQAVARAMIAGGRGGKIINMASQAGRR 144
>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|B Chain B, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|C Chain C, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
pdb|2CFC|D Chain D, Structural Basis For Stereo Selectivity In The (R)- And
(S)- Hydroxypropylethane Thiosulfonate Dehydrogenases
Length = 250
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG----QRAETTLATNFFALV 72
D+ D+ ++ Q G +D+LVNNAGI ++ G ++ + +A N +
Sbjct: 60 DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIF 119
Query: 73 TVCHILFP--LLRPHARVVNVASKLGMLYNVPSQELRQTLFNE--SLTEDQLLDMMTDYV 128
C + P LL+ +VN+AS + L P + T LT+ +D +
Sbjct: 120 LGCRAVLPHMLLQGAGVIVNIAS-VASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGI 178
Query: 129 QYNGPLDKILDTAM 142
+ N +++T M
Sbjct: 179 RCNAVCPGMIETPM 192
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI----YRDTAPGSF 56
+ + V +LD+ D SS+ + D + G D+L+NNAGI Y T G
Sbjct: 54 EAAARTMAGQVEVRELDLQDLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGF- 108
Query: 57 GQRAETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93
E+ + TN + ++L P L RVV V+S
Sbjct: 109 ----ESQIGTNHLGHFALTNLLLPRLTD--RVVTVSS 139
>pdb|3OP4|A Chain A, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
pdb|3OP4|B Chain B, Crystal Structure Of Putative
3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio
Cholerae O1 Biovar Eltor Str. N16961 In Complex With
Nadp+
Length = 248
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-----TAPGSFGQRAET 62
+N + L++ + SI + I + GG+D+LVNNAGI RD + ET
Sbjct: 54 GDNGKGXALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXRXKEEEWSDIXET 113
Query: 63 TLATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYNV 101
L T+ F L + + R++NV S +G N
Sbjct: 114 NL-TSIFRLSKAV-LRGXXKKRQGRIINVGSVVGTXGNA 150
>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From
Streptococcus Suis Type 2
pdb|3O03|A Chain A, Quaternary Complex Structure Of Gluconate 5-Dehydrogenase
From Streptococcus Suis Type 2
Length = 291
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR-----DTAPGSFGQRAETTL 64
N + D+ D+ I + I+++ G +D+LVNNAGI R + F Q + L
Sbjct: 84 NAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDL 143
Query: 65 ATNFFALVTVCHILFPLLRPHARVVNVASKLGML 98
F +V+ I + + H +++N+ S + L
Sbjct: 144 NAPF--IVSKAVIPSMIKKGHGKIINICSMMSEL 175
>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
pdb|3TZK|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92a) From Vibrio Cholerae
Length = 251
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAET 62
+N + L++ + SI + I + GG+D+LVNNA I RD + ET
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDIMET 116
Query: 63 TLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYN 100
L T+ F L +L +++ R++NV S +G + N
Sbjct: 117 NL-TSIFRLSKA--VLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|N Chain N, Architecture Of Mammalian Fatty Acid Synthase
Length = 226
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
N + L++ D +SI + + I+ + G +D+LVNNAGI RD
Sbjct: 52 NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD 92
>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|E Chain E, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|F Chain F, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|G Chain G, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2Q|H Chain H, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2V|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|B Chain B, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|C Chain C, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
pdb|2Q2W|D Chain D, Structure Of D-3-Hydroxybutyrate Dehydrogenase From
Pseudomonas Putida
Length = 255
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALV 72
H D+ D + I L + + GG+D+LVNNAGI F + + +A N A+
Sbjct: 56 HPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVF 115
Query: 73 TVCHILFPLLRPH--ARVVNVASKLGML 98
+ P +R R++N+AS G++
Sbjct: 116 HGTRLALPGMRARNWGRIINIASVHGLV 143
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVT 73
Q D+ D +++ +L + GG+D+LVNNAGI T G + +A N
Sbjct: 83 QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFN 142
Query: 74 VCHILFPLLRPHARVVNVA-SKLGMLY 99
LR R++N + S++G+L+
Sbjct: 143 TLREAAQRLRVGGRIINXSTSQVGLLH 169
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280
Y+ +K GV + + LSK+ R DI VN V PG TDL
Sbjct: 175 YAAAKAGVEAXTHV----LSKELRGRDITVNAVAPGPTATDL 212
>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
pdb|3SJ7|B Chain B, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From
Staphylococcus Aureus Complex With Nadph
Length = 252
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVT 73
Q ++ D + + ++ +Q G LD+LVNNAGI RD Q + + TN +
Sbjct: 66 QANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFN 125
Query: 74 VCHILFP-LLRPHA-RVVNVASKLGMLYNVPSQ 104
P +LR + ++N++S +G + N P Q
Sbjct: 126 CIQKATPQMLRQRSGAIINLSSVVGAVGN-PGQ 157
>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1T|D Chain D, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4)
From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom
Resolution
pdb|3V1U|A Chain A, Crystal Structure Of A Beta-Ketoacyl Reductase Fabg4 From
Mycobacterium Tuberculosis H37rv Complexed With Nad+ And
Hexanoyl-Coa At 2.5 Angstrom Resolution
Length = 462
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 16 LDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSF-GQRAETTLATNFFALVT 73
LD+ ++ K+ + ++ HGG D+LVNNAGI RD + R + LA N A +
Sbjct: 274 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 333
Query: 74 VCHILF--PLLRPHARVVNVASKLGMLYN 100
+ L + RV+ ++S G+ N
Sbjct: 334 LTEGLVGNGSIGEGGRVIGLSSIAGIAGN 362
>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
pdb|3M1L|B Chain B, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A
Putative Ketoacyl Reductase (Fabg4) From Mycobacterium
Tuberculosis H37rv At 2.5 Angstrom Resolution
Length = 432
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 16 LDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSF-GQRAETTLATNFFALVT 73
LD+ ++ K+ + ++ HGG D+LVNNAGI RD + R + LA N A +
Sbjct: 250 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 309
Query: 74 VCHILF--PLLRPHARVVNVASKLGMLYN 100
+ L + RV+ ++S G+ N
Sbjct: 310 LTEGLVGNGSIGEGGRVIGLSSIAGIAGN 338
>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
pdb|3LLS|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Mycobacterium Tuberculosis
Length = 475
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 16 LDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSF-GQRAETTLATNFFALVT 73
LD+ ++ K+ + ++ HGG D+LVNNAGI RD + R + LA N A +
Sbjct: 287 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 346
Query: 74 VCHILF--PLLRPHARVVNVASKLGMLYN 100
+ L + RV+ ++S G+ N
Sbjct: 347 LTEGLVGNGSIGEGGRVIGLSSIAGIAGN 375
>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|B Chain B, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|C Chain C, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
pdb|4FW8|D Chain D, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh
Length = 454
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 16 LDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSF-GQRAETTLATNFFALVT 73
LD+ ++ K+ + ++ HGG D+LVNNAGI RD + R + LA N A +
Sbjct: 266 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 325
Query: 74 VCHILF--PLLRPHARVVNVASKLGMLYN 100
+ L + RV+ ++S G+ N
Sbjct: 326 LTEGLVGNGSIGEGGRVIGLSSIAGIAGN 354
>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|B Chain B, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|C Chain C, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
pdb|3Q6I|D Chain D, Crystal Structure Of Fabg4 And Coenzyme Binary Complex
Length = 446
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 16 LDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSF-GQRAETTLATNFFALVT 73
LD+ ++ K+ + ++ HGG D+LVNNAGI RD + R + LA N A +
Sbjct: 258 LDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDARWDAVLAVNLLAPLR 317
Query: 74 VCHILF--PLLRPHARVVNVASKLGMLYN 100
+ L + RV+ ++S G+ N
Sbjct: 318 LTEGLVGNGSIGEGGRVIGLSSIAGIAGN 346
>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
pdb|3U09|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(G92d) From Vibrio Cholerae
Length = 251
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAET 62
+N + L++ + SI + I + GG+D+LVNNA I RD + ET
Sbjct: 57 GDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDIMET 116
Query: 63 TLATNFFALVTVCHILFPLLRP-HARVVNVASKLGMLYN 100
L T+ F L +L +++ R++NV S +G + N
Sbjct: 117 NL-TSIFRLSKA--VLRGMMKKRQGRIINVGSVVGTMGN 152
>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
pdb|1VL8|B Chain B, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441)
From Thermotoga Maritima At 2.07 A Resolution
Length = 267
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 3/96 (3%)
Query: 1 QKVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QR 59
QK+ + + D+ + + KL + ++ + G LD +VN AGI R F
Sbjct: 63 QKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDE 122
Query: 60 AETTLATNFFALVTVCHILFPLLRP--HARVVNVAS 93
+ N F VC F LLR + ++N+ S
Sbjct: 123 FRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 158
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
+Y+ SK GVA L+ L+K+ R I VN + PG+ T +TE
Sbjct: 171 AYAASKGGVASLT----KALAKEWGRYGIRVNVIAPGWYRTKMTE 211
>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIU|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.1 A Resolution
pdb|4IIV|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
pdb|4IIV|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Escherichia Coli Strain Cft073
Complexed With Nadp+ At 2.5 A Resolution
Length = 267
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFGQRAETTLA 65
N N R D+ ++ ++ + QHG +V+NAGI RD A P + +
Sbjct: 74 NGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIH 133
Query: 66 TN---FFALVTVCHILFPLL--RPHARVVNVASKLGMLYN 100
TN F+ ++ C + P++ R R++ ++S G++ N
Sbjct: 134 TNLDSFYNVIQPC--IMPMIGARQGGRIITLSSVSGVMGN 171
>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4B79|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery.
pdb|4AVY|B Chain B, The Aeropath Project And Pseudomonas Aeruginosa
High-throughput Crystallographic Studies For Assessment
Of Potential Targets In Early Stage Drug Discovery
Length = 242
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 20/92 (21%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLAT--- 66
+R +LDI D + +L + + LD+LVNNAGI RD R E LAT
Sbjct: 55 RIRREELDITDSQRLQRLFEALPR----LDVLVNNAGISRD--------REEYDLATFER 102
Query: 67 ----NFFALVTVCHILFPLL-RPHARVVNVAS 93
N A + + PLL + ++N+AS
Sbjct: 103 VLRLNLSAAMLASQLARPLLAQRGGSILNIAS 134
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNF----FA 70
LD+ D I + D+ ++G +D+LVNNAG T G+F + E L F F
Sbjct: 57 SLDVTDGERIDVVAADVLARYGRVDVLVNNAG---RTQVGAFEETTERELRDLFELHVFG 113
Query: 71 LVTVCHILFPLLRPH--ARVVNVASKLGML 98
+ L P R VVN++S G L
Sbjct: 114 PARLTRALLPQXRERGSGSVVNISSFGGQL 143
>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium
Smegmatis
Length = 454
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Query: 16 LDILDQSSIHKLHDDIQTQHGG-LDLLVNNAGIYRDTAPGSFGQ-RAETTLATNFFALVT 73
LD+ ++ K+ + HGG +D+LVNNAGI RD + + R + +A N A
Sbjct: 266 LDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQR 325
Query: 74 VCHILF--PLLRPHARVVNVASKLGMLYN 100
+ L + RV+ ++S G+ N
Sbjct: 326 LTEGLVGNGTIGEGGRVIGLSSMAGIAGN 354
>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|B Chain B, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|C Chain C, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
pdb|2HSD|D Chain D, The Refined Three-Dimensional Structure Of 3alpha,20beta-
Hydroxysteroid Dehydrogenase And Possible Roles Of The
Residues Conserved In Short-Chain Dehydrogenases
Length = 253
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPE 290
SY SK GV LS + L D+ R VN VHPG T +T G+ E
Sbjct: 150 SYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTYTPMTAETGIRQGE 198
>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|B Chain B, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|C Chain C, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
pdb|1HDC|D Chain D, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid
Dehydrogenase By A Licorice-Derived Steroidal Inhibitor
Length = 254
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPE 290
SY SK GV LS + L D+ R VN VHPG T +T G+ E
Sbjct: 150 SYGASKWGVRGLSKLAAVELGTDRIR----VNSVHPGMTYTPMTAETGIRQGE 198
>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|B Chain B, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|C Chain C, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|D Chain D, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|E Chain E, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|F Chain F, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|G Chain G, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
pdb|2UVD|H Chain H, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis (Ba3989)
Length = 246
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFA--LVTVCHILFPLLRPHARVVNVA 92
G +D+LVNNAG+ +D + +T + TN L T F + + H R+VN+A
Sbjct: 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIA 140
Query: 93 SKLGMLYNVPSQ 104
S +G+ N P Q
Sbjct: 141 SVVGVTGN-PGQ 151
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 43/111 (38%), Gaps = 44/111 (39%)
Query: 172 FPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQLAKEGKDKE 231
F + + H R+VN+AS +G+ N P Q
Sbjct: 127 FMMRQRHGRIVNIASVVGVTGN-PGQA--------------------------------- 152
Query: 232 AGWPEFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
+Y +K GV L+ T +K+ +I VN + PG++ TD+T+
Sbjct: 153 ------NYVAAKAGVIGLT----KTSAKELASRNITVNAIAPGFIATDMTD 193
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAETTLATNFF 69
+ D+ +S + L + + G LD+LVNNAGI RDT + + L F
Sbjct: 84 KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQ 104
I+ L + R++N+AS +G + N P Q
Sbjct: 144 CSRAAAKIM--LKQRSGRIINIASVVGEMGN-PGQ 175
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 231 EAGWP-EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEH 283
E G P + +YS +K GV L+ T++K+ I VN V PG++ TD+T
Sbjct: 169 EMGNPGQANYSAAKAGVIGLT----KTVAKELASRGITVNAVAPGFIATDMTSE 218
>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
pdb|2PH3|B Chain B, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein]
Reductase Ttha0415 From Thermus Thermophilus
Length = 245
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 36 GGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLLRPH--ARVVNVA 92
GGLD LVNNAGI RDT + E L N A+ L+ R+VN+
Sbjct: 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNIT 138
Query: 93 SKLGMLYNVPSQ 104
S +G+L N P Q
Sbjct: 139 SVVGILGN-PGQ 149
>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
pdb|3FTP|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase From Burkholderia Pseudomallei At 2.05 A
Resolution
Length = 270
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 231 EAGWP-EFSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTP 289
AG P + +Y+ +K GVA ++ L+++ I VN V PG+++TD+T KG+
Sbjct: 168 SAGNPGQVNYAAAKAGVAGMTR----ALAREIGSRGITVNCVAPGFIDTDMT--KGLPQE 221
Query: 290 EQGKIRQKIYL 300
+Q ++ +I L
Sbjct: 222 QQTALKTQIPL 232
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-----ETTLAT 66
R L++ D +++ L + + G L++LVNNAGI +D R + + T
Sbjct: 80 RGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQD----QLAMRMKDDEWDAVIDT 135
Query: 67 NFFALVTVCH-ILFPLLRPH-ARVVNVASKLGMLYNVPSQ 104
N A+ + +L P+++ R+VN+ S +G N P Q
Sbjct: 136 NLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGN-PGQ 174
>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
pdb|3OSU|B Chain B, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein
Reductase, Fabg, From Staphylococcus Aureus
Length = 246
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVT 73
Q ++ D + ++ +Q G LD+LVNNAGI RD Q + + TN +
Sbjct: 60 QANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFN 119
Query: 74 VCHILFP--LLRPHARVVNVASKLGMLYNVPSQ 104
P L + ++N++S +G + N P Q
Sbjct: 120 CIQKATPQXLRQRSGAIINLSSVVGAVGN-PGQ 151
>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|B Chain B, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|C Chain C, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
pdb|3I4F|D Chain D, Structure Of Putative 3-oxoacyl-reductase From Bacillus
Thuringiensis
Length = 264
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY 48
K+ ++F Q D+ + +HK+ ++ + G +D L+NNAG Y
Sbjct: 53 KDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPY 96
>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|B Chain B, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|C Chain C, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
pdb|3LYL|D Chain D, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase,
Fabg From Francisella Tularensis
Length = 247
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
L+I D SI +I+ ++ +D+LVNNAGI RD
Sbjct: 61 LNISDIESIQNFFAEIKAENLAIDILVNNAGITRD 95
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-AETTLATNFFALVTVC 75
++ D S + D ++ + G +D+LVNNAGI RD + + + TN +L V
Sbjct: 71 NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVT 130
Query: 76 HILFPLL--RPHARVVNVAS 93
+ + R R++N++S
Sbjct: 131 KQVIDGMVERGWGRIINISS 150
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
+YS +K G+ + +L+++ + VN V PGY+ TD+ +
Sbjct: 162 NYSTAKAGIHGFTM----SLAQEVATKGVTVNTVSPGYIGTDMVK 202
>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|D Chain D, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|A Chain A, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|B Chain B, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|E Chain E, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|F Chain F, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|G Chain G, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
pdb|3A28|H Chain H, Crystal Structure Of L-2,3-Butanediol Dehydrogenase
Length = 258
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR 49
K+ + + F LD+ D+++ D+ + GG D+LVNNAGI +
Sbjct: 46 KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ 93
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 10 NVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAETTL 64
NV + D+ + + + G +D+LVNNAGI RDT + + T L
Sbjct: 56 NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNL 115
Query: 65 ATNFFALVTVCHILFPLLRPHARVVNVASKLGMLYN 100
+ + V I+ L + +++N+ S G++ N
Sbjct: 116 KSAYLCTKAVSKIM--LKQKSGKIINITSIAGIIGN 149
>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|B Chain B, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|C Chain C, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
pdb|3RKR|D Chain D, Crystal Structure Of A Metagenomic Short-Chain
Oxidoreductase (Sdr) In Complex With Nadp
Length = 262
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVT 73
H D+ +I + HG D+LVNNAG+ G FG T + AL+
Sbjct: 83 HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV------GWFGGPLHTMKPAEWDALIA 136
Query: 74 V-CHILFPLLRPHARVVNVASKLGMLYNVPS 103
V + LLR A + +A+K G + N+ S
Sbjct: 137 VNLKAPYLLLRAFAPAM-IAAKRGHIINISS 166
>pdb|3RJ5|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ5|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|A Chain A, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|B Chain B, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|C Chain C, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|D Chain D, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|E Chain E, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
pdb|3RJ9|F Chain F, Structure Of Alcohol Dehydrogenase From Drosophila
Lebanonesis T114v Mutant Complexed With Nad+
Length = 254
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 10 NVRFHQLDI-LDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNF 68
N+ FH D+ + + KL I Q +D+L+N AGI D + E T+A NF
Sbjct: 56 NITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD-------HQIERTIAINF 108
Query: 69 FALVTVCHILFPLL-----RPHARVVNVASKLGM--LYNVP---SQELRQTLFNESLTED 118
LV V + P + N+ S G ++ VP + + F SL +
Sbjct: 109 TGLVNVTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKL 168
Query: 119 QLLDMMTDYVQYNG----PLDKILDTAMDTAP 146
+ +T Y G PL ++ +D P
Sbjct: 169 APITGVTAYSINPGITRTPLVHTFNSWLDVEP 200
>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|B Chain B, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|C Chain C, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
pdb|3GK3|D Chain D, Crystal Structure Of Acetoacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 269
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQR 59
++ + + + +D+ D S + + + G +D+L+NNAGI RD G +
Sbjct: 71 RDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAV 130
Query: 60 AETTLATNFFALVTVCHILFPLLRPHARVVNVAS 93
T L F VT I + R R+VN+ S
Sbjct: 131 MRTDLDAMFN--VTKQFIAGMVERRFGRIVNIGS 162
>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|B Chain B, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|C Chain C, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NUG|D Chain D, Crystal Structure Of Wild Type Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3RWB|A Chain A, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|B Chain B, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|C Chain C, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
pdb|3RWB|D Chain D, Crystal Structure Of Complex Of 4pal (4-Pyridoxolactone)
And Pldh (Tetrameric Pyridoxal 4-Dehydrogenase) From
Mesorhizobium Loti
Length = 247
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
R DI D S+ L +IQ GG+D+LVNNA I
Sbjct: 55 RAIAADISDPGSVKALFAEIQALTGGIDILVNNASI 90
>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1WMB|B Chain B, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate
Dehydrogenase
pdb|1X1T|A Chain A, Crystal Structure Of D-3-hydroxybutyrate Dehydrogenase
From Pseudomonas Fragi Complexed With Nad+
pdb|2ZTL|A Chain A, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|B Chain B, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|C Chain C, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTL|D Chain D, Closed Conformation Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+ And L-3-Hydroxybutyrate
pdb|2ZTV|A Chain A, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|B Chain B, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|C Chain C, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
pdb|2ZTV|D Chain D, The Binary Complex Of D-3-Hydroxybutyrate Dehydrogenase
With Nad+
Length = 260
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFF 69
V + D+ ++ L D+ Q G +D+LVNNAGI F ++ + LA N
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 70 ALVTVCHILFPLLRPH--ARVVNVASKLGMLYN 100
A+ P ++ R++N+AS G++ +
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVAS 149
>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|B Chain B, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|C Chain C, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|D Chain D, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|E Chain E, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|F Chain F, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|G Chain G, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|2YZ7|H Chain H, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From
Alcaligenes Faecalis
pdb|3VDR|A Chain A, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|B Chain B, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|C Chain C, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDR|D Chain D, Crystal Structure Of D-3-Hydroxybutyrate Dehydrogenase,
Prepared In The Presence Of The Substrate
D-3-Hydroxybutyrate And Nad(+)
pdb|3VDQ|A Chain A, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|B Chain B, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|C Chain C, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
pdb|3VDQ|D Chain D, Crystal Structure Of Alcaligenes Faecalis
D-3-Hydroxybutyrate Dehydrogenase In Complex With Nad(+)
And Acetate
Length = 260
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 36 GGLDLLVNNAGIYRDTAP-GSFG-QRAETTLATNFFALVTVCHILFPLLRPH--ARVVNV 91
GGLD+LVNNAGI + TAP F + +A N A+ P+++ R++N+
Sbjct: 82 GGLDILVNNAGI-QHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGRIINI 140
Query: 92 ASKLGMLYNV 101
AS G++ +V
Sbjct: 141 ASAHGLVASV 150
>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|B Chain B, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|C Chain C, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
pdb|3NDR|D Chain D, Crystal Structure Of Tetrameric Pyridoxal
4-Dehydrogenase From Mesorhizobium Loti
Length = 247
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
R DI D S+ L +IQ GG+D+LVNNA I
Sbjct: 55 RAIAADISDPGSVKALFAEIQALTGGIDILVNNASI 90
>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|B Chain B, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|C Chain C, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
pdb|2ZTU|D Chain D, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Complexed With Nad+
Length = 260
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFF 69
V + D+ ++ L D+ Q G +D+LVNNAGI F ++ + LA N
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 70 ALVTVCHILFPLLRPH--ARVVNVASKLGMLYN 100
A+ P ++ R++N+AS G++ +
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVAS 149
>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|B Chain B, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|C Chain C, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
pdb|2ZTM|D Chain D, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase
Length = 260
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRAETTLATNFF 69
V + D+ ++ L D+ Q G +D+LVNNAGI F ++ + LA N
Sbjct: 57 VLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLS 116
Query: 70 ALVTVCHILFPLLRPH--ARVVNVASKLGMLYN 100
A+ P ++ R++N+AS G++ +
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVAS 149
>pdb|1SNY|A Chain A, Carbonyl Reductase Sniffer Of D. Melanogaster
Length = 267
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 7 NNNNVRFHQLDILDQSSIHKLHDDIQ--TQHGGLDLLVNNAGIYRDTA--PGSFGQRAET 62
N++N+ ++D+ + + KL DI+ T+ GL++L NNAGI +A Q
Sbjct: 70 NHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLD 129
Query: 63 TLATNFFALVTVCHILFPLLRPHARV 88
TL TN + + PLL+ A+
Sbjct: 130 TLQTNTVVPIXLAKACLPLLKKAAKA 155
>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein
Reductase From Brassica Napus Complexed With Nadp+
pdb|2CDH|G Chain G, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|H Chain H, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|I Chain I, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|J Chain J, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|K Chain K, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution.
pdb|2CDH|L Chain L, Architecture Of The Thermomyces Lanuginosus Fungal Fatty
Acid Synthase At 5 Angstrom Resolution
Length = 244
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-----APGSFGQRAETTLATNFFAL 71
D+ ++ + + G +D++VNNAGI RDT + + + L F
Sbjct: 59 DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCT 118
Query: 72 VTVCHILFPLLRPHARVVNVASKLGMLYNV 101
I+ + R++N+AS +G++ N+
Sbjct: 119 QAATKIMMK--KRKGRIINIASVVGLIGNI 146
>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|B Chain B, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|C Chain C, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
pdb|3RKU|D Chain D, Substrate Fingerprint And The Structure Of Nadp+ Dependent
Serine Dehydrogenase From Saccharomyces Cerevisiae
Complexed With Nadp+
Length = 287
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 30/165 (18%)
Query: 8 NNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGS--FGQRA----E 61
N V QLDI I +++ + +D+LVNNAG A GS GQ A +
Sbjct: 86 NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAG----KALGSDRVGQIATEDIQ 141
Query: 62 TTLATNFFALVTVCHILFPLLRPH--ARVVNVAS-------KLGMLYNVP-------SQE 105
TN AL+ + + P+ + +VN+ S G +Y +
Sbjct: 142 DVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDS 201
Query: 106 LRQTLFNES----LTEDQLLDMMTDYVQYNGPLDKILDTAMDTAP 146
LR+ L N L L++ V+Y G ++ + DT P
Sbjct: 202 LRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP 246
>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
pdb|3OEC|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Thermoresistibile
Length = 317
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF-GQRA 60
++ + + Q D+ D +S+ + D+ + G +D+LV+N GI S Q+
Sbjct: 100 RLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQW 159
Query: 61 ETTLATNFFALVTVCHILFPLLRPHAR---VVNVASKLGMLYNVPSQ 104
L TN C + P + + V+ V+S +G L P Q
Sbjct: 160 SDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG-LRGAPGQ 205
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281
Y+ SK GV L +L+ + R +I VN V+PG VNT++
Sbjct: 208 YAASKHGVQGLML----SLANEVGRHNIRVNSVNPGAVNTEMA 246
>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|B Chain B, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|C Chain C, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
pdb|1XG5|D Chain D, Structure Of Human Putative Dehydrogenase Mgc4172 In
Complex With Nadp
Length = 279
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 14 HQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYR 49
++ D+ ++ I + I++QH G+D+ +NNAG+ R
Sbjct: 88 YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR 123
>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|B Chain B, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|C Chain C, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
pdb|2JAP|D Chain D, Clavulanic Acid Dehydrogenase: Structural And Biochemical
Analysis Of The Final Step In The Biosynthesis Of The
Beta- Lactamase Inhibitor Clavulanic Acid
Length = 247
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 21/118 (17%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG--QRAETT-----LATN 67
+LD+ D+ + GGLD+LVNNAGI G + A+TT + TN
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIML------LGPVEDADTTDWTRMIDTN 115
Query: 68 FFALVTVCHILFP-LLRPHARVVNVASKLGMLYNVPSQELRQT------LFNESLTED 118
L+ + P LLR VV ++S G + NV + + Q F+E+L ++
Sbjct: 116 LLGLMYMTRAALPHLLRSKGTVVQMSSIAGRV-NVRNAAVYQATKFGVNAFSETLRQE 172
>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
pdb|2NM0|B Chain B, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier
Protein Reductase From Streptomyces Coelicolor A3(2)
Length = 253
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD-----TAPGSFGQRAETTLATNFF 69
+ DI D + + + +I+ HG +++L+ NAG+ +D + F ET L F
Sbjct: 65 KCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFR 124
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLGML 98
+ + L RVV ++S +G+L
Sbjct: 125 VVKRANRAM--LRAKKGRVVLISSVVGLL 151
Score = 30.8 bits (68), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 7/53 (13%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKGVLTPEQ 291
Y+ SK G+ + +L+++ +I N V PG+V+TD+T+ VLT EQ
Sbjct: 159 YAASKAGLVGFA----RSLARELGSRNITFNVVAPGFVDTDMTK---VLTDEQ 204
>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
pdb|1YB1|B Chain B, Crystal Structure Of Human 17-Beta-Hydroxysteroid
Dehydrogenase Type Xi
Length = 272
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG-IYRDTAPGSFGQRAET 62
CK V +D ++ I+ ++ + G + +LVNNAG +Y + + E
Sbjct: 75 CKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEK 134
Query: 63 TLATNFFALVTVCHILFPLLRP--HARVVNVASKLGMLYNVP------SQELRQTLFNES 114
T N A P + H +V VAS G + +VP S + F+++
Sbjct: 135 TFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV-SVPFLLAYCSSKFAAVGFHKT 193
Query: 115 LTED 118
LT++
Sbjct: 194 LTDE 197
>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida
Tropicalis Peroxisomal Multifunctional Enzyme Type 2
Length = 604
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 34 QHGGLDLLVNNAGIYRDTAPGSFG-QRAETTLATNFFALVTVCHILFPLL--RPHARVVN 90
++G +D+LVNNAGI RD + Q ++ + + + +P + R++N
Sbjct: 392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIIN 451
Query: 91 VASKLGMLYN 100
+ S G+ N
Sbjct: 452 ITSTSGIYGN 461
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 234 WPEFS-YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTEHKG 285
WP S YS SK +A L+ L++D I VN VHPG +TD G
Sbjct: 174 WPGISLYSASKAALAGLT----KGLARDLGPRGITVNIVHPGSTDTDXNPADG 222
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 13/99 (13%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTL-------ATN 67
+ D D +I + + GGLD+LVN+AGI+ +AP ETT+ A N
Sbjct: 87 RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH-SAP-----LEETTVADFDEVXAVN 140
Query: 68 FFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQEL 106
F A L R++ + S L L P L
Sbjct: 141 FRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISL 179
>pdb|1A4U|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1A4U|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
pdb|1B16|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B16|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-3-pentanone
pdb|1B14|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B14|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Binary
Complex With Nad+
pdb|1B15|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B15|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis Ternary
Complex With Nad-Acetone
pdb|1B2L|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis:
Ternary Complex With Nad-Cyclohexanone
pdb|1SBY|A Chain A, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
pdb|1SBY|B Chain B, Alcohol Dehydrogenase From Drosophila Lebanonensis
Complexed With Nad+ And 2,2,2-Trifluoroethanol At 1.1 A
Resolution
Length = 254
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 22/152 (14%)
Query: 10 NVRFHQLDI-LDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNF 68
N+ FH D+ + + KL I Q +D+L+N AGI D + E T+A NF
Sbjct: 56 NITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD-------HQIERTIAINF 108
Query: 69 FALVTVCHILFPLL-----RPHARVVNVASKLGM--LYNVP---SQELRQTLFNESLTED 118
LV + P + N+ S G ++ VP + + F SL +
Sbjct: 109 TGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKL 168
Query: 119 QLLDMMTDYVQYNG----PLDKILDTAMDTAP 146
+ +T Y G PL ++ +D P
Sbjct: 169 APITGVTAYSINPGITRTPLVHTFNSWLDVEP 200
>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|B Chain B, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|C Chain C, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
pdb|2BD0|D Chain D, Chlorobium Tepidum Sepiapterin Reductase Complexed With
Nadp And Sepiapterin
Length = 244
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVTVC 75
DI D + + +L I ++G +D LVNNAG+ R A + + T+ TN +
Sbjct: 66 DISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLT 125
Query: 76 HILFPLL-RPHA 86
LF L+ R H+
Sbjct: 126 QALFALMERQHS 137
>pdb|3U9L|A Chain A, The Crystal Structure Of
3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From
Sinorhizobium Meliloti
Length = 324
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 4 CKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG 46
++N+ ++R +LD+ Q S+ + D I + G +D+L++NAG
Sbjct: 54 ARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG 96
>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp
pdb|1AE1|B Chain B, Tropinone Reductase-I Complex With Nadp
Length = 273
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 10 NVRFHQLDILDQSSIHKLHDDI-QTQHGGLDLLVNNAGIYRDTAPGSFGQR-AETTLATN 67
NV D+L ++ KL + G L++LVNNAG+ F ++ + TN
Sbjct: 71 NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTN 130
Query: 68 FFALVTVCHILFPLLR 83
F A + I +PLL+
Sbjct: 131 FEAAYHLSQIAYPLLK 146
>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
pdb|2B4Q|B Chain B, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex
Length = 276
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRA-ETTLATNFFALVTVC 75
D+ ++ +L + LD+LVNNAG A S+ E + N ++ +
Sbjct: 85 DLSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCI 144
Query: 76 HILFPLLRPH------ARVVNVASKLGM 97
L PLLR ARV+N+ S G+
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAGI 172
>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZM|B Chain B, Maba From Mycobacterium Tuberculosis
pdb|1UZN|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZN|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281
Y+ SK GV ++ +++++ + ++ N V PGY++TD+T
Sbjct: 153 YAASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 191
>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181
pdb|3AWD|B Chain B, Crystal Structure Of Gox2181
pdb|3AWD|C Chain C, Crystal Structure Of Gox2181
pdb|3AWD|D Chain D, Crystal Structure Of Gox2181
Length = 260
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 11/105 (10%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI------YRDTAPGSFGQRAETTLATNFF 69
+D+ + S+ + Q G +D+LV AGI D G + ++ + L F
Sbjct: 69 MDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFR 128
Query: 70 ALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFNES 114
+ V I+ L + +V + S G++ N P Q Q +N S
Sbjct: 129 SCQAVGRIM--LEQKQGVIVAIGSMSGLIVNRPQQ---QAAYNAS 168
>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis
pdb|1UZL|B Chain B, Maba From Mycobacterium Tuberculosis
Length = 247
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281
Y+ SK GV ++ +++++ + ++ N V PGY++TD+T
Sbjct: 153 YAASKAGVIGMAR----SIARELSKANVTANVVAPGYIDTDMT 191
>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGK|B Chain B, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase
pdb|2BGL|A Chain A, X-Ray Structure Of Binary-Secoisolariciresinol
Dehydrogenase
pdb|2BGM|A Chain A, X-Ray Structure Of Ternary-Secoisolariciresinol
Dehydrogenase
Length = 278
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 1 QKVCKN--NNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
QKVC N + + + F D+ + L D +HG LD++ N G+ T
Sbjct: 54 QKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTT 106
>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|B Chain B, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|C Chain C, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
pdb|2JAH|D Chain D, Biochemical And Structural Analysis Of The Clavulanic Acid
Dehydeogenase (Cad) From Streptomyces Clavuligerus
Length = 247
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG--QRAETT-----LATN 67
+LD+ D+ + GGLD+LVNNAGI G + A+TT + TN
Sbjct: 62 ELDVADRQGVDAAVASTVEALGGLDILVNNAGIXL------LGPVEDADTTDWTRXIDTN 115
Query: 68 FFALVTVCHILFP-LLRPHARVVNVASKLGMLYNVPSQELRQT------LFNESLTED 118
L P LLR VV +S G + NV + + Q F+E+L ++
Sbjct: 116 LLGLXYXTRAALPHLLRSKGTVVQXSSIAGRV-NVRNAAVYQATKFGVNAFSETLRQE 172
>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l
pdb|2NTN|B Chain B, Crystal Structure Of Maba-c60v/g139a/s144l
Length = 267
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 239 YSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLT 281
Y+ SK GV ++ +++++ + ++ N V PGY++TD+T
Sbjct: 173 YAASKAGVIGMA----RSIARELSKANVTANVVAPGYIDTDMT 211
>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|E Chain E, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
pdb|3QLJ|F Chain F, Crystal Structure Of A Short Chain Dehydrogenase From
Mycobacterium Avium
Length = 322
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRD 50
+ + +N + Q L Q+++ GGLD+LVNNAGI RD
Sbjct: 87 EAVADGSNVADWDQAAGLIQTAVETF--------GGLDVLVNNAGIVRD 127
>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|B Chain B, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|C Chain C, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
pdb|2NWQ|D Chain D, Short Chain Dehydrogenase From Pseudomonas Aeruginosa
Length = 272
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFG--QRAETTLATNFFALVT 73
LD+ D+++ D++ + L L+NNAG+ T P +T + TN L+
Sbjct: 76 LDVRDRAAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLY 135
Query: 74 VCHILFPLLRPH---ARVVNVASKLG 96
+L P L H A +VN+ S G
Sbjct: 136 STRLLLPRLIAHGAGASIVNLGSVAG 161
>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase
Type1, Complexed With Nad+
Length = 267
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALV 72
F Q D+ DQ + + G LD+LVNNAG+ + + E TL N +++
Sbjct: 62 FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE-------KNWEKTLQINLVSVI 114
Query: 73 TVCHILFPLLRPH-----ARVVNVASKLGML 98
+ ++ + ++N++S G++
Sbjct: 115 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLM 145
>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFF|B Chain B, Crystal Structure Of Rv2002 Gene Product From
Mycobacterium Tuberculosis
pdb|1NFQ|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFQ|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-----YRDTAPGSFGQRAETTLAT 66
R+ LD+ + D T GGL +LVNNAGI D A + + + L
Sbjct: 56 RYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTG 115
Query: 67 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFN-ESLTEDQLLDMMT 125
F + V + R ++N++S G+ V T F LT+ L++
Sbjct: 116 VFLGIRAVVKPMKEAGR--GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGP 173
Query: 126 DYVQYN 131
++ N
Sbjct: 174 SGIRVN 179
>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|B Chain B, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|C Chain C, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
pdb|3UXY|D Chain D, The Crystal Structure Of Short Chain Dehydrogenase From
Rhodobacter Sphaeroides
Length = 266
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETT-------LATNFF 69
D+ + + L + G LD++VNNAG+ S G+ ETT L N
Sbjct: 74 DLREAAYADGLPGAVAAGLGRLDIVVNNAGVI------SRGRITETTDADWSLSLGVNVE 127
Query: 70 ALVTVCHILFPL--LRPHARVVNVASKLGM 97
A +C PL +VNVAS G+
Sbjct: 128 APFRICRAAIPLXAAAGGGAIVNVASCWGL 157
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT-APGSFGQRAETTLATNFFALVT 73
++D+ D++++ + + GG+D+ + NAGI P + + + TN
Sbjct: 77 KVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFN 136
Query: 74 VCHILFP--LLRPHARVVNVASKLGMLYN 100
+ P + R + R+V V+S LG N
Sbjct: 137 TIAAVAPGMIKRNYGRIVTVSSMLGHSAN 165
>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|B Chain B, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|C Chain C, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|D Chain D, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|E Chain E, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
pdb|3PXX|F Chain F, Crystal Structure Of Carveol Dehydrogenase From
Mycobacterium Avium Bound To Nicotinamide Adenine
Dinucleotide
Length = 287
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALVTV 74
++D+ D++++ + + + G LD++V NAGI A Q +F ++
Sbjct: 77 EVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPV-QAFADAFDVDFVGVINT 135
Query: 75 CHILFPLLRPHARVVNVASKLGML 98
H P L A ++ S G++
Sbjct: 136 VHAALPYLTSGASIITTGSVAGLI 159
>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IIN|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Complexed With Nad+
pdb|4IJK|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|C Chain C, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
pdb|4IJK|D Chain D, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier
Protein]reductase From Helicobacter Pylori 26695
Length = 271
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 19 LDQSSIHKLHDDIQT---QHGGLDLLVNNAGIYRDT-----APGSFGQRAETTLATNFFA 70
D +S + IQT GGL LVNNAG+ RD F + L + F
Sbjct: 86 FDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIG 145
Query: 71 LVTVCHILFPLLRPH--ARVVNVASKLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYV 128
C ++ VVNVAS +G N + QT N S ++ ++ M +
Sbjct: 146 ----CREALKVMSKSRFGSVVNVASIIGERGN-----MGQT--NYSASKGGMIAMSKSFA 194
Query: 129 QYNGPLDKI 137
Y G L I
Sbjct: 195 -YEGALRNI 202
>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain
Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein]
Reductase From Mycobacterium Paratuberculosis Atcc
Baa-968 K-10
pdb|3QIV|B Chain B, Crystal Structure Of A Putative Short-Chain
Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein]
Reductase From Mycobacterium Paratuberculosis Atcc
Baa-968 K-10
Length = 253
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIY 48
+D+ D S + D + GG+D LVNNA I+
Sbjct: 65 VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIF 97
>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|B Chain B, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|C Chain C, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|D Chain D, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|E Chain E, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|F Chain F, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|G Chain G, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|H Chain H, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|I Chain I, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|J Chain J, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|K Chain K, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|L Chain L, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|M Chain M, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|N Chain N, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|O Chain O, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
pdb|1YDE|P Chain P, Crystal Structure Of Human Retinal Short-Chain
DehydrogenaseREDUCTASE 3
Length = 270
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 15/95 (15%)
Query: 13 FHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQRAETTLATNFFALV 72
F D+ + + L + + G LD +VNNAG + QR E T A F L+
Sbjct: 58 FILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP------QRPEETSAQGFRQLL 111
Query: 73 --------TVCHILFPLLR-PHARVVNVASKLGML 98
T+ + P LR V+N++S +G +
Sbjct: 112 ELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAI 146
>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|B Chain B, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|C Chain C, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
pdb|4DA9|D Chain D, Crystal Structure Of Putative Short-Chain
DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021
Length = 280
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 8/91 (8%)
Query: 11 VRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-------YRDTAPGSFGQRAETT 63
V F + D+ D SS D + + G +D LVNNAGI + D P +F
Sbjct: 81 VIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVN 140
Query: 64 L-ATNFFALVTVCHILFPLLRPHARVVNVAS 93
L T FF + L R ++N+ S
Sbjct: 141 LRGTVFFTQAVLKAXLASDARASRSIINITS 171
>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|B Chain B, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|C Chain C, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
pdb|4E6P|D Chain D, Crystal Structure Of A Probable Sorbitol Dehydrogenase
(Target Psi- 012078) From Sinorhizobium Meliloti 1021
Length = 259
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAP 53
Q D+ Q SI GGLD+LVNNA ++ D AP
Sbjct: 60 QXDVTRQDSIDAAIAATVEHAGGLDILVNNAALF-DLAP 97
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query: 25 HKLHDDIQTQHGG--LDLLVNNAGIYRDTAPGSFGQRAETT-------LATNFFALVTVC 75
L +++Q + G D+L+NNAGI PG+F + ETT ++ N A +
Sbjct: 77 SSLDNELQNRTGSTKFDILINNAGI----GPGAFIE--ETTEQFFDRXVSVNAKAPFFII 130
Query: 76 HILFPLLRPHARVVNVAS 93
LR ++R++N++S
Sbjct: 131 QQALSRLRDNSRIINISS 148
>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|B Chain B, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|C Chain C, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|D Chain D, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|E Chain E, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|F Chain F, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|G Chain G, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|H Chain H, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|I Chain I, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|J Chain J, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|K Chain K, Mannitol Dehydrogenase From Agaricus Bisporus
pdb|1H5Q|L Chain L, Mannitol Dehydrogenase From Agaricus Bisporus
Length = 265
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 257 LSKDKRRPDIIVNPVHPGYVNTDLTEH 283
L+ + I VN + PGYVNTD T H
Sbjct: 186 LAAEWASAGIRVNALSPGYVNTDQTAH 212
>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|B Chain B, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|C Chain C, Rv2002 Gene Product From Mycobacterium Tuberculosis
pdb|1NFR|D Chain D, Rv2002 Gene Product From Mycobacterium Tuberculosis
Length = 260
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 8/126 (6%)
Query: 12 RFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI-----YRDTAPGSFGQRAETTLAT 66
R+ LD+ + D T GGL +LVNNAGI D A + + + L
Sbjct: 56 RYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTG 115
Query: 67 NFFALVTVCHILFPLLRPHARVVNVASKLGMLYNVPSQELRQTLFN-ESLTEDQLLDMMT 125
F + V R ++N++S G+ V T F LT+ L++
Sbjct: 116 VFLGIRAVVKPXKEAGR--GSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGP 173
Query: 126 DYVQYN 131
++ N
Sbjct: 174 SGIRVN 179
>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh)
(Apoenyzme) From Lactobacillus Brevis
pdb|1ZK4|A Chain A, Structure Of R-specific Alcohol Dehydrogenase (wildtype)
From Lactobacillus Brevis In Complex With Acetophenone
And Nadp
Length = 251
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
+ ++F Q D D+ KL D + G + LVNNAGI
Sbjct: 54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI 92
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
+Y+ SK V +S + A L + D+ VN VHPGY+ T L +
Sbjct: 154 AYNASKGAVRIMS--KSAALDCALKDYDVRVNTVHPGYIKTPLVD 196
>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZJZ|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK0|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nadh
pdb|1ZK1|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant
G37d) From Lactobacillus Brevis In Complex With
Phenylethanol And Nad
pdb|1ZK2|A Chain A, Orthorhombic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|A Chain A, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|B Chain B, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|C Chain C, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|D Chain D, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|E Chain E, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|F Chain F, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|G Chain G, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
pdb|1ZK3|H Chain H, Triclinic Crystal Structure Of The Apo-Form Of
R-Specific Alcohol Dehydrogenase (Mutant G37d) From
Lactobacillus Brevis
Length = 251
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 9 NNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
+ ++F Q D D+ KL D + G + LVNNAGI
Sbjct: 54 DQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI 92
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 238 SYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDLTE 282
+Y+ SK V +S + A L + D+ VN VHPGY+ T L +
Sbjct: 154 AYNASKGAVRIMS--KSAALDCALKDYDVRVNTVHPGYIKTPLVD 196
>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|B Chain B, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|C Chain C, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
pdb|3R3S|D Chain D, Structure Of The Ygha Oxidoreductase From Salmonella
Enterica
Length = 294
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSF----GQRAETTLATNFFALV 72
D+ D+S L + GGLD+L AG + TA ++ + T A N FAL
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAG--KQTAIPEIKDLTSEQFQQTFAVNVFALF 165
Query: 73 TVCHILFPLLRPHARVVNVAS 93
+ PLL A ++ +S
Sbjct: 166 WITQEAIPLLPKGASIITTSS 186
>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|B Chain B, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|C Chain C, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
pdb|3NYW|D Chain D, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg)
From Bacteroides Thetaiotaomicron
Length = 250
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPG----SFGQRAETTLATNFFAL 71
LDI D + DI ++G +D+LVN A + D + +F + E + + L
Sbjct: 66 LDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGSLSEPVDNFRKIXEINVIAQYGIL 125
Query: 72 VTVCHILFPLLRPHARVVNVASK 94
TV I ++ + + NVAS+
Sbjct: 126 KTVTEIX--KVQKNGYIFNVASR 146
>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
pdb|2RHR|A Chain A, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And
Inhibitor Emodin
Length = 277
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 79 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVT 138
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 172
>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3CSD|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3QRW|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3QRW|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph
pdb|3RI3|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
pdb|3RI3|A Chain A, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To
Nadph And The Inhibitor Emodin
Length = 281
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 83 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 176
>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With
Unknown Function From Saccharomyces Cerevisiae
Length = 254
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTA-PGSFGQRAETTLA-TNFFALVTV 74
DI + S + +L + HG +D LV NAG+ A L NFF++V++
Sbjct: 58 DITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117
Query: 75 CHILFP-LLRPHARVVNVASKLGMLY 99
I P L + + VV V+S +Y
Sbjct: 118 VGIALPELKKTNGNVVFVSSDACNMY 143
>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
pdb|3V2H|B Chain B, The Crystal Structure Of D-Beta-Hydroxybutyrate
Dehydrogenase From Sinorhizobium Meliloti
Length = 281
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 22/46 (47%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
+V ++ V H D S I + + GG D+LVNNAG+
Sbjct: 69 EVAGLSSGTVLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGV 114
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 237 FSYSVSKLGVAKLSFIQHATLSKDKRRPDIIVNPVHPGYVNTDL 280
F+Y++SK +A+ + +L+ D + I VN V PG V+TDL
Sbjct: 138 FAYTLSKGAIAQXT----KSLALDLAKYQIRVNTVCPGTVDTDL 177
>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DBZ|B Chain B, Crystal Structure Of V151l Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 83 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAP 176
>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon
Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp
Length = 235
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
++ + V +H LD+ S+ + + + G +D++V NAG+
Sbjct: 45 ELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGL 90
>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
pdb|3TN7|B Chain B, Crystal Structure Of Short-Chain Alcohol Dehydrogenase
From Hyperthermophilic Archaeon Thermococcus Sibiricus
Complexed With 5- Hydroxy-Nadp
Length = 257
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
++ + V +H LD+ S+ + + + G +D++V NAG+
Sbjct: 67 ELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGL 112
>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|B Chain B, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|C Chain C, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
pdb|3PGX|D Chain D, Crystal Structure Of A Putative Carveol Dehydrogenase From
Mycobacterium Paratuberculosis Bound To Nicotinamide
Adenine Dinucleotide
Length = 280
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
LD+ D +++ +L D Q G LD++V NAG+
Sbjct: 84 LDVRDDAALRELVADGMEQFGRLDVVVANAGV 115
>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7G|B Chain B, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp
Bound
pdb|1X7H|A Chain A, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1X7H|B Chain B, Actinorhodin Polyketide Ketoreductase, With Nadph Bound
pdb|1XR3|A Chain A, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
pdb|1XR3|B Chain B, Actinorhodin Polyketide Ketoreductase With Nadp And The
Inhibitor Isoniazid Bound
Length = 261
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 63 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 122
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 123 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 156
>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
pdb|4DRY|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Rhizobium Meliloti
Length = 281
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 2 KVCKNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAG 46
++ N VR D+ D + L ++ + LDLLVNNAG
Sbjct: 76 EIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAG 120
>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RH4|B Chain B, Actinorhodin Ketoreductase, Actkr, With Nadph And
Inhibitor Emodin
pdb|2RHC|B Chain B, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
pdb|2RHC|A Chain A, Actinorhodin Ketordeuctase, Actkr, With Nadp+ And
Inhibitor Emodin
Length = 277
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 79 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 138
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 139 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 172
>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC0|B Chain B, Crystal Structure Of F189w Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 83 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 176
>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPE|B Chain B, Tropinone Reductase-Ii Complexed With Nadph
pdb|1IPF|A Chain A, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
pdb|1IPF|B Chain B, Tropinone Reductase-Ii Complexed With Nadph And Tropinone
Length = 259
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 17 DILDQSSIHKLHDDIQTQ-HGGLDLLVNNAG--IYRDTAPGSFGQRAETTLATNFFALVT 73
D+ +S +L + + HG L++LVNNAG IY++ + + ++ NF A
Sbjct: 65 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTV-EDYSLIMSINFEAAYH 123
Query: 74 VCHILFPLLRPHAR--VVNVASKLGMLYNVPSQELRQTLFN--ESLTEDQLLDMMTDYVQ 129
+ + P L+ R VV ++S G L VP + + + LT + D ++
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGAL-AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 182
Query: 130 YNGPLDKILDTAM 142
NG ++ T++
Sbjct: 183 VNGVGPGVIATSL 195
>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase
pdb|1W4Z|B Chain B, Structure Of Actinorhodin Polyketide (Actiii) Reductase
Length = 281
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 83 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 176
>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE2|B Chain B, Tropinone Reductase-Ii Complexed With Nadp+ And
Pseudotropine
pdb|2AE1|A Chain A, Tropinone Reductase-Ii
Length = 260
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 17 DILDQSSIHKLHDDIQTQ-HGGLDLLVNNAG--IYRDTAPGSFGQRAETTLATNFFALVT 73
D+ +S +L + + HG L++LVNNAG IY++ + + ++ NF A
Sbjct: 66 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTV-EDYSLIMSINFEAAYH 124
Query: 74 VCHILFPLLRPHAR--VVNVASKLGMLYNVPSQELRQTLFN--ESLTEDQLLDMMTDYVQ 129
+ + P L+ R VV ++S G L VP + + + LT + D ++
Sbjct: 125 LSVLAHPFLKASERGNVVFISSVSGAL-AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIR 183
Query: 130 YNGPLDKILDTAM 142
NG ++ T++
Sbjct: 184 VNGVGPGVIATSL 196
>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
pdb|4DC1|B Chain B, Crystal Structure Of Y202f Actinorhodin Polyketide
Ketoreductase With Nadph
Length = 281
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 17 DILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDTAPGSFGQR-----AETTLATNFFAL 71
D+ I L + ++G +D+LVNNAG A ET L F
Sbjct: 83 DVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVT 142
Query: 72 VTVCHILFPLLRPHARVVNVAS---KLGMLYNVP 102
V L R R+VN+AS K G+++ P
Sbjct: 143 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAP 176
>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
pdb|3AI3|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose
Length = 263
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAG 46
+D+ + + + +++ GG D+LVNNAG
Sbjct: 64 VDVATPEGVDAVVESVRSSFGGADILVNNAG 94
>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI1|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph And
L-Sorbose Reveals The Structure Bases Of Its Catalytic
Mechanism And High Substrate Selectivity
pdb|3AI2|A Chain A, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|B Chain B, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|H Chain H, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|D Chain D, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|E Chain E, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|C Chain C, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|F Chain F, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
pdb|3AI2|G Chain G, The Crystal Structure Of L-Sorbose Reductase From
Gluconobacter Frateurii Complexed With Nadph
Length = 263
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 16 LDILDQSSIHKLHDDIQTQHGGLDLLVNNAG 46
+D+ + + + +++ GG D+LVNNAG
Sbjct: 64 VDVATPEGVDAVVESVRSSFGGADILVNNAG 94
>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
pdb|3IOY|B Chain B, Structure Of Putative Short-Chain Dehydrogenase
(Saro_0793) From Novosphingobium Aromaticivorans
Length = 319
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
QLD+ + D+++ + G + +L NNAG+
Sbjct: 65 QLDVASREGFKMAADEVEARFGPVSILCNNAGV 97
>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|B Chain B, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|C Chain C, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|D Chain D, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|E Chain E, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|F Chain F, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|G Chain G, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
pdb|1GEG|H Chain H, Cryatal Structure Analysis Of Meso-2,3-Butanediol
Dehydrogenase
Length = 256
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 15 QLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGIYRDT 51
++D+ D+ + + + GG D++VNNAG+ T
Sbjct: 57 KVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPST 93
>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|B Chain B, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|C Chain C, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|D Chain D, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|E Chain E, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|F Chain F, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|G Chain G, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
pdb|4EGF|H Chain H, Crystal Structure Of A L-Xylulose Reductase From
Mycobacterium Smegmatis
Length = 266
Score = 27.7 bits (60), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 9/40 (22%)
Query: 36 GGLDLLVNNAGIYR-----DTAPGSFGQRAETTLATNFFA 70
GGLD+LVNNAGI DT P F + T+A N A
Sbjct: 97 GGLDVLVNNAGISHPQPVVDTDPQLF----DATIAVNLRA 132
>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|B Chain B, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|C Chain C, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
pdb|3UVE|D Chain D, Crystal Structure Of Carveol Dehydrogenase
((+)-Trans-Carveol Dehydrogenase) From Mycobacterium
Avium
Length = 286
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 5 KNNNNNVRFHQLDILDQSSIHKLHDDIQTQHGGLDLLVNNAGI 47
K +N + ++D+ D ++ D Q G LD++V NAGI
Sbjct: 72 KGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGI 114
>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|B Chain B, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|C Chain C, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
pdb|1XKQ|D Chain D, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF
Unknown Function From Caenorhabditis Elegans With
Cofactor
Length = 280
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 34 QHGGLDLLVNNAGIYRDTAPGSFGQRA--------ETTLATNFFALVTVCHILFP-LLRP 84
Q G +D+LVNNAG P +FG TL N A++ + + P L+
Sbjct: 83 QFGKIDVLVNNAGA---AIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS 139
Query: 85 HARVVNVAS 93
+VNV+S
Sbjct: 140 KGEIVNVSS 148
>pdb|1VF6|A Chain A, 2.1 Angstrom Crystal Structure Of The Pals-1-L27n And Patj
L27 Heterodimer Complex
pdb|1VF6|B Chain B, 2.1 Angstrom Crystal Structure Of The Pals-1-L27n And Patj
L27 Heterodimer Complex
Length = 83
Score = 27.3 bits (59), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 94 KLGMLYNVPSQELRQTLFNESLTEDQLLDMMTDYVQYNGPLDKILDTAMDTAPGSF 149
KL M Y L+ LFN Q+L + Q G L+ IL++ +TA F
Sbjct: 27 KLSMFYET----LKSPLFN------QILTLQQSIKQLKGQLNHILESGKETAAAKF 72
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,123,322
Number of Sequences: 62578
Number of extensions: 365411
Number of successful extensions: 1072
Number of sequences better than 100.0: 129
Number of HSP's better than 100.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 932
Number of HSP's gapped (non-prelim): 183
length of query: 313
length of database: 14,973,337
effective HSP length: 99
effective length of query: 214
effective length of database: 8,778,115
effective search space: 1878516610
effective search space used: 1878516610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)