Query psy2267
Match_columns 462
No_of_seqs 240 out of 2267
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 20:21:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2267.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2267hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 4.4E-96 1E-100 785.9 37.8 393 21-455 1-393 (547)
2 3rtk_A 60 kDa chaperonin 2; he 100.0 1.4E-96 5E-101 788.5 33.7 392 21-455 1-392 (546)
3 1iok_A Chaperonin 60; chaperon 100.0 6.5E-96 2E-100 784.8 30.8 393 21-455 2-394 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 8.8E-95 3E-99 776.3 38.8 392 21-455 1-392 (543)
5 3ko1_A Chaperonin; 9-fold symm 100.0 7.5E-74 2.6E-78 615.7 36.6 364 15-413 15-435 (553)
6 1q3q_A Thermosome alpha subuni 100.0 9.3E-74 3.2E-78 615.0 34.6 352 22-413 15-428 (548)
7 1a6d_B Thermosome (beta subuni 100.0 1.5E-73 5.2E-78 613.0 35.5 351 22-412 13-425 (543)
8 1a6d_A Thermosome (alpha subun 100.0 1.1E-73 3.8E-78 614.1 34.3 350 22-412 14-424 (545)
9 3iyg_E T-complex protein 1 sub 100.0 2.3E-73 7.8E-78 608.4 36.1 357 23-412 3-416 (515)
10 3iyg_H T-complex protein 1 sub 100.0 2.7E-73 9.1E-78 607.4 36.4 351 24-411 5-415 (515)
11 3ruv_A Chaperonin, CPN; double 100.0 1.4E-73 4.7E-78 613.1 33.8 358 22-412 11-420 (543)
12 3iyg_B T-complex protein 1 sub 100.0 4.4E-73 1.5E-77 605.7 37.2 356 23-412 3-413 (513)
13 3p9d_C T-complex protein 1 sub 100.0 6.9E-75 2.4E-79 626.3 22.8 373 15-455 4-450 (590)
14 3p9d_D T-complex protein 1 sub 100.0 8.5E-74 2.9E-78 612.9 29.1 349 22-410 11-428 (528)
15 3p9d_A T-complex protein 1 sub 100.0 1.2E-73 4.2E-78 615.1 28.2 360 22-411 16-437 (559)
16 3iyg_Q T-complex protein 1 sub 100.0 1.7E-72 5.8E-77 601.3 35.2 353 24-411 4-411 (512)
17 3iyg_A T-complex protein 1 sub 100.0 3.9E-72 1.3E-76 600.4 37.9 363 23-413 3-423 (529)
18 3iyg_D T-complex protein 1 sub 100.0 2.3E-72 7.8E-77 600.9 35.2 356 23-412 4-420 (518)
19 3p9d_E T-complex protein 1 sub 100.0 1.2E-72 4.1E-77 607.7 31.5 357 23-412 38-459 (562)
20 3p9d_B T-complex protein 1 sub 100.0 7E-73 2.4E-77 606.2 23.3 358 22-413 9-421 (527)
21 3p9d_G T-complex protein 1 sub 100.0 5.3E-73 1.8E-77 609.1 22.0 360 15-412 9-429 (550)
22 3iyg_G T-complex protein 1 sub 100.0 1.7E-70 5.8E-75 586.0 36.8 355 24-411 3-414 (515)
23 3iyg_Z T-complex protein 1 sub 100.0 3.4E-69 1.2E-73 576.0 34.6 355 24-412 4-419 (517)
24 3p9d_H T-complex protein 1 sub 100.0 2E-69 6.7E-74 583.4 29.2 354 24-412 19-439 (568)
25 3p9d_F T-complex protein 1 sub 100.0 6.9E-69 2.4E-73 577.3 23.7 352 23-409 10-428 (546)
26 3aq1_B Thermosome subunit; gro 100.0 7.2E-63 2.5E-67 525.5 25.1 315 58-412 1-378 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 2.6E-59 8.8E-64 430.3 15.4 194 205-440 1-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 1.8E-57 6E-62 419.0 16.5 189 209-439 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 3E-42 1E-46 303.5 14.4 143 211-354 1-143 (145)
30 1gml_A T-complex protein 1 sub 99.8 1.9E-20 6.6E-25 173.4 13.5 143 205-364 3-167 (178)
31 1ass_A Thermosome; chaperonin, 99.8 7.1E-19 2.4E-23 159.9 12.9 134 209-359 1-152 (159)
32 3p9d_C T-complex protein 1 sub 94.7 0.014 5E-07 62.8 3.3 38 365-413 451-489 (590)
33 1we3_A CPN60(groel); chaperoni 93.7 0.035 1.2E-06 59.3 3.8 35 365-411 393-428 (543)
34 1kp8_A Groel protein; chaperon 91.3 0.052 1.8E-06 58.0 1.1 34 365-410 394-428 (547)
35 1iok_A Chaperonin 60; chaperon 91.2 0.038 1.3E-06 59.0 -0.0 34 365-410 395-429 (545)
36 3rtk_A 60 kDa chaperonin 2; he 89.3 0.049 1.7E-06 58.1 -1.2 29 365-405 393-422 (546)
37 3p9d_B T-complex protein 1 sub 83.3 0.04 1.4E-06 58.5 -5.8 60 396-455 307-382 (527)
38 3iyg_Q T-complex protein 1 sub 45.5 5.5 0.00019 41.8 0.7 23 433-455 352-374 (512)
39 3iyg_B T-complex protein 1 sub 27.9 8.1 0.00028 40.6 -1.5 28 428-455 344-375 (513)
40 3aon_B V-type sodium ATPase su 27.6 75 0.0026 26.3 4.8 73 247-321 28-104 (115)
41 3iyg_D T-complex protein 1 sub 26.5 18 0.00061 38.0 0.9 22 434-455 361-382 (518)
42 1go4_E MAD1 (mitotic arrest de 24.6 44 0.0015 27.2 2.7 18 421-438 82-99 (100)
43 3p9d_D T-complex protein 1 sub 21.8 21 0.00073 37.5 0.4 21 435-455 372-392 (528)
44 3p9d_G T-complex protein 1 sub 21.2 5.8 0.0002 42.1 -4.2 29 427-455 359-391 (550)
45 3o0m_A HIT family protein; ssg 20.7 99 0.0034 26.3 4.4 35 27-61 56-91 (149)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=4.4e-96 Score=785.93 Aligned_cols=393 Identities=55% Similarity=0.875 Sum_probs=385.3
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhc
Q psy2267 21 YAKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNT 100 (462)
Q Consensus 21 ~~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q 100 (462)
++|++.||.++|..|++||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|||||++|||++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (547)
T 1kp8_A 1 AAKDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKA 80 (547)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhh
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHcCCCchhhhH
Q psy2267 101 NEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGEL 180 (462)
Q Consensus 101 ~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~i~~l 180 (462)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|++++++|+++
T Consensus 81 d~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~l 160 (547)
T 1kp8_A 81 NDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKL 160 (547)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHH
T ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHhccCceEEEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccccCCHHhHHHHHHHHH
Q psy2267 181 ISDAMKRVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 260 (462)
Q Consensus 181 i~~A~~~vg~~g~I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ki~s~~~i~~~le~i~ 260 (462)
+++|+.+++++|.|++++|++++|++++++||+|+++|.||||++++++|+..++||+|++++.+|++++++++++|++.
T Consensus 161 iadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~ 240 (547)
T 1kp8_A 161 IAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVA 240 (547)
T ss_dssp HHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999856999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCcee
Q psy2267 261 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 340 (462)
Q Consensus 261 ~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a 340 (462)
+.|+||||++++|+++|+++|+.|++|++++|+|||+|+|||+|+++|+|||++|||++++++ .|++++++++++||+|
T Consensus 241 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~-~g~~l~~~~~~~LG~a 319 (547)
T 1kp8_A 241 KAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEE-IGMELEKATLEDLGQA 319 (547)
T ss_dssp GGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGG-GTCCSTTCCTTTSEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEeccc-ccCCcccCCHHHCCce
Confidence 999999999999999999999999999999999999999999999999999999999999976 7888999999999999
Q ss_pred eEEEEeeCceEEEEecCCCCeeEEeechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCCh
Q psy2267 341 GEIVITKDDTLILKVTSAPPCTCKSCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKEDIDRRADQIRDQIEATTSD 420 (462)
Q Consensus 341 ~~v~i~~~~t~ii~~~~~~~~TI~sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e~i~~r~~~~~~~~~~~~~~ 420 (462)
++|++++++++++. |.++++.+..|++|++.|++.++|+
T Consensus 320 ~~v~~~~~~~~~i~-----------------------------------------g~~~~~~i~~r~~~i~~~~~~~~s~ 358 (547)
T 1kp8_A 320 KRVVINKDTTTIID-----------------------------------------GVGEEAAIQGRVAQIRQQIEEATSD 358 (547)
T ss_dssp EEEEECSSCEEEEE-----------------------------------------ECCCHHHHHHHHHHHHHHHHSCCSH
T ss_pred eEEEEccceEEEEc-----------------------------------------CCCCHHHHHHHHHHHHHHhhcccch
Confidence 99999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEEeccccccccccccc
Q psy2267 421 YEREKLQERLARLASGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 421 ~~~~~l~~r~~~l~~~~a~~~vg~~~~~~~~~~~~ 455 (462)
||||||+||||||+||+|+|.|||+||.|++|++.
T Consensus 359 ~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr 393 (547)
T 1kp8_A 359 YDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKA 393 (547)
T ss_dssp HHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHH
Confidence 99999999999999999999999999999999986
No 2
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.4e-96 Score=788.54 Aligned_cols=392 Identities=50% Similarity=0.813 Sum_probs=317.7
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhc
Q psy2267 21 YAKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNT 100 (462)
Q Consensus 21 ~~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q 100 (462)
|+|++.||+++|.+|+.|++.||++|+|||||+||||||++++|+|+|||||+||+|+|+++||++|+||||++++|++|
T Consensus 1 ~~k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~q 80 (546)
T 3rtk_A 1 MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKT 80 (546)
T ss_dssp ------------------------------------------------------------CCCHHHHHHHHHHHHHHTSC
T ss_pred CCceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHcCCCchhhhH
Q psy2267 101 NEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGEL 180 (462)
Q Consensus 101 ~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~i~~l 180 (462)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++.++|.+||++|++ ++.++++
T Consensus 81 d~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~l 159 (546)
T 3rtk_A 81 DDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDL 159 (546)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred hhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHHhccCceEEEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccccCCHHhHHHHHHHHH
Q psy2267 181 ISDAMKRVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 260 (462)
Q Consensus 181 i~~A~~~vg~~g~I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ki~s~~~i~~~le~i~ 260 (462)
+++||.+++++|.|+++.+++..+++++++||+|+++|.||||++++++|+..++||+|++++.+|+++++++++++++.
T Consensus 160 iadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~ 239 (546)
T 3rtk_A 160 IAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVI 239 (546)
T ss_dssp HHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHH
T ss_pred HHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHH
Confidence 99999999999999999888887789999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCcee
Q psy2267 261 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 340 (462)
Q Consensus 261 ~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a 340 (462)
+.|+|||||+++|+++||++|+.|+++|.++|+|||+|+||++|+++|+|||++|||++++++ .|++++++++++||+|
T Consensus 240 ~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~-~~~~l~~~~~~~LG~a 318 (546)
T 3rtk_A 240 GAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEE-VGLTLENADLSLLGKA 318 (546)
T ss_dssp TTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSS-SSCCSTTCCTTTSEEE
T ss_pred hcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeecc-ccCccccCCHhhCCee
Confidence 999999999999999999999999999999999999999999999999999999999999977 7889999999999999
Q ss_pred eEEEEeeCceEEEEecCCCCeeEEeechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCCh
Q psy2267 341 GEIVITKDDTLILKVTSAPPCTCKSCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKEDIDRRADQIRDQIEATTSD 420 (462)
Q Consensus 341 ~~v~i~~~~t~ii~~~~~~~~TI~sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e~i~~r~~~~~~~~~~~~~~ 420 (462)
++|++++++++++. |.|+++.+..|++|++.|++.++|+
T Consensus 319 ~~v~i~~d~~~~i~-----------------------------------------g~~~~~~i~~r~~~i~~~~~~~~s~ 357 (546)
T 3rtk_A 319 RKVVVTKDETTIVE-----------------------------------------GAGDTDAIAGRVAQIRQEIENSDSD 357 (546)
T ss_dssp EEEEECSSCEEEEE-----------------------------------------ECSCHHHHHHHHHHHHHHHHTCSCH
T ss_pred EEEEEcCCeEEEEc-----------------------------------------CCCCHHHHHHHHHHHHHHHhhccch
Confidence 99999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEEeccccccccccccc
Q psy2267 421 YEREKLQERLARLASGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 421 ~~~~~l~~r~~~l~~~~a~~~vg~~~~~~~~~~~~ 455 (462)
||||||+||||||+||+|+|.|||+||.+++|++.
T Consensus 358 ~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er 392 (546)
T 3rtk_A 358 YDREKLQERLAKLAGGVAVIKAGAATEVELKERKH 392 (546)
T ss_dssp HHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHH
T ss_pred hhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999875
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=6.5e-96 Score=784.82 Aligned_cols=393 Identities=54% Similarity=0.894 Sum_probs=344.0
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhc
Q psy2267 21 YAKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNT 100 (462)
Q Consensus 21 ~~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q 100 (462)
|+|++.||.++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|||||++|||++++|++|
T Consensus 2 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 81 (545)
T 1iok_A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRT 81 (545)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHG
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHcCCCchhhhH
Q psy2267 101 NEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGEL 180 (462)
Q Consensus 101 ~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~i~~l 180 (462)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|++++++|+++
T Consensus 82 d~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~l 161 (545)
T 1iok_A 82 NDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQ 161 (545)
T ss_dssp GGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHH
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999989999999
Q ss_pred HHHHHHHhccCceEEEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccccCCHHhHHHHHHHHH
Q psy2267 181 ISDAMKRVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 260 (462)
Q Consensus 181 i~~A~~~vg~~g~I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ki~s~~~i~~~le~i~ 260 (462)
+++|+.+++++|.|++++|++++|++++++||+|+++|.||||++++++|+..++||+|++++.+|+++++++++++++.
T Consensus 162 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~ 241 (545)
T 1iok_A 162 IAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVI 241 (545)
T ss_dssp HHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC---------
T ss_pred HHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999855999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCcee
Q psy2267 261 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 340 (462)
Q Consensus 261 ~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a 340 (462)
+.|+||||++++|+++|+++|+.|++|++++|+|||+|+|||+|+++|+|||++|||++++++ .|++++++++++||+|
T Consensus 242 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~-~~~~l~~~~~~~LG~a 320 (545)
T 1iok_A 242 QSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISED-LGMKLENVTIDMLGRA 320 (545)
T ss_dssp --CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC----------------CTTSEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeeccc-ccCCcccCCHHHcCcC
Confidence 999999999999999999999999999999999999999999999999999999999999976 7888999999999999
Q ss_pred eEEEEeeCceEEEEecCCCCeeEEeechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCCh
Q psy2267 341 GEIVITKDDTLILKVTSAPPCTCKSCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKEDIDRRADQIRDQIEATTSD 420 (462)
Q Consensus 341 ~~v~i~~~~t~ii~~~~~~~~TI~sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e~i~~r~~~~~~~~~~~~~~ 420 (462)
++|++++++++++. |.++++.+.+|++|++.|++.++|+
T Consensus 321 ~~v~~~~~~~~~i~-----------------------------------------g~~~~~~i~~r~~~i~~~~~~~~s~ 359 (545)
T 1iok_A 321 KKVSINKDNTTIVD-----------------------------------------GAGEKAEIEARVSQIRQQIEETTSD 359 (545)
T ss_dssp EEEEECSSCEEEES-----------------------------------------CCCCHHHHHHHHHHHHHHHTTCCCS
T ss_pred cEEEEecCEEEEEe-----------------------------------------CCCCHHHHHHHHHHHHHHHhccCch
Confidence 99999999999998 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEEeccccccccccccc
Q psy2267 421 YEREKLQERLARLASGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 421 ~~~~~l~~r~~~l~~~~a~~~vg~~~~~~~~~~~~ 455 (462)
||||||+||||||+||+|+|.|||+||.+++|++.
T Consensus 360 ~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr 394 (545)
T 1iok_A 360 YDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKD 394 (545)
T ss_dssp SHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHH
T ss_pred hhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999885
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=8.8e-95 Score=776.27 Aligned_cols=392 Identities=52% Similarity=0.836 Sum_probs=383.7
Q ss_pred hhhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhc
Q psy2267 21 YAKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNT 100 (462)
Q Consensus 21 ~~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q 100 (462)
|+|++.||.++|..|++||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|||||++|||++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (543)
T 1we3_A 1 MAKILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKT 80 (543)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhh
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHcCCCchhhhH
Q psy2267 101 NEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGEL 180 (462)
Q Consensus 101 ~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~i~~l 180 (462)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|++ +++||++
T Consensus 81 d~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~l 159 (543)
T 1we3_A 81 NDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKL 159 (543)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred heecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHHhccCceEEEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccccCCHHhHHHHHHHHH
Q psy2267 181 ISDAMKRVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 260 (462)
Q Consensus 181 i~~A~~~vg~~g~I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ki~s~~~i~~~le~i~ 260 (462)
+++||.+++++|.|++++|++++|++++++||+|+++|.||||++++++|+..++||+|++++.+|++++++++++|++.
T Consensus 160 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~ 239 (543)
T 1we3_A 160 IADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVA 239 (543)
T ss_dssp HHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999866999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCcee
Q psy2267 261 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 340 (462)
Q Consensus 261 ~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a 340 (462)
+.|+||||++++|+++|+++|+.|+++++++|+|||+|+|||+|+++|+|||++|||++++++ .|++++++++++||+|
T Consensus 240 ~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~-~g~~l~~~~~~~LG~a 318 (543)
T 1we3_A 240 QTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEE-LGFKLENATLSMLGRA 318 (543)
T ss_dssp TTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTT-TTCCGGGCCGGGCEEE
T ss_pred hcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeecc-ccCCcccCCHHHCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999976 7888999999999999
Q ss_pred eEEEEeeCceEEEEecCCCCeeEEeechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCCh
Q psy2267 341 GEIVITKDDTLILKVTSAPPCTCKSCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKEDIDRRADQIRDQIEATTSD 420 (462)
Q Consensus 341 ~~v~i~~~~t~ii~~~~~~~~TI~sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e~i~~r~~~~~~~~~~~~~~ 420 (462)
++|++++++++++. |.++++.+..|++|++.|++.++|+
T Consensus 319 ~~v~~~~~~~~~i~-----------------------------------------g~~~~~~i~~r~~~i~~~~~~~~s~ 357 (543)
T 1we3_A 319 ERVRITKDETTIVG-----------------------------------------GKGKKEDIEARINGIKKELETTDSE 357 (543)
T ss_dssp EEEEECSSCEEEEE-----------------------------------------ECCCHHHHHHHHHHHHHHHTTCCSH
T ss_pred eEEEEEcCEEEEEc-----------------------------------------CCCCHHHHHHHHHHHHHHhhccCch
Confidence 99999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEEeccccccccccccc
Q psy2267 421 YEREKLQERLARLASGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 421 ~~~~~l~~r~~~l~~~~a~~~vg~~~~~~~~~~~~ 455 (462)
||||+|+||||||+||+|+|.|||+||.+++|++.
T Consensus 358 ~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r 392 (543)
T 1we3_A 358 YAREKLQERLAKLAGGVAVIRVGAATETELKEKKH 392 (543)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHH
T ss_pred hHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999885
No 5
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=7.5e-74 Score=615.73 Aligned_cols=364 Identities=24% Similarity=0.359 Sum_probs=316.0
Q ss_pred hHHHhhhhhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHH
Q psy2267 15 PLLRRAYAKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQ 94 (462)
Q Consensus 15 ~~~~~~~~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~ 94 (462)
|++...-..+..||.++|..|+.||+.|+++|||||||+||||||++++|+|+|||||+||+|+|+++| |+|||++
T Consensus 15 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h----P~Akll~ 90 (553)
T 3ko1_A 15 PVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQH----PAAKLLV 90 (553)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCS----HHHHHHH
T ss_pred eEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccC----hhHHHHH
Confidence 554444356788999999999999999999999999999999999999999999999999999999999 5999999
Q ss_pred HHHhhcccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHcC
Q psy2267 95 DVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISAN 172 (462)
Q Consensus 95 ~~a~~q~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~~ 172 (462)
++|++||+++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.+||+||++
T Consensus 91 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~ 170 (553)
T 3ko1_A 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLS 170 (553)
T ss_dssp HHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHT
T ss_pred HHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999988 78999999999999
Q ss_pred C------CchhhhHHHHHHHHhccC--ce-------EEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEee
Q psy2267 173 G------DKAVGELISDAMKRVGKE--GV-------ITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQ 235 (462)
Q Consensus 173 ~------~~~i~~li~~A~~~vg~~--g~-------I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~ 235 (462)
+ +++||+|+++||.+++++ |. |+++ .|+++.| +++++||+|+++|.||||++..+++++.+.
T Consensus 171 sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~d-s~lv~G~v~dk~~~~~~m~~~ien~kIll~ 249 (553)
T 3ko1_A 171 SKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSIND-TQLVYGIVVDKEVVHPGMPKRLENAKIALI 249 (553)
T ss_dssp TSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGG-CEEESEEEECSCBSCTTSCSCCBSCEEEEE
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcccc-ceeeEEEEecccccCCCCccccccceEEEe
Confidence 8 478999999999999975 65 7664 7888774 999999999999999999887777777777
Q ss_pred ceeEEeccc------ccCCHHh-----------HHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecC
Q psy2267 236 DALVLLSES------KISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAP 298 (462)
Q Consensus 236 n~~Ili~d~------ki~s~~~-----------i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p 298 (462)
|+++.+... +|+++++ +.++++++.+.|+||||++++|+++|+++|+.+ +|++|+
T Consensus 250 d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~------gI~~v~-- 321 (553)
T 3ko1_A 250 DASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKK------GVLAVR-- 321 (553)
T ss_dssp CSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHH------TCEEEC--
T ss_pred cCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhc------chhhhh--
Confidence 776655322 4788887 457789999999999999999999999999743 367764
Q ss_pred CCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEe---eCceEEEEecCC---CCeeEE--------
Q psy2267 299 GFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKVTSA---PPCTCK-------- 364 (462)
Q Consensus 299 ~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~---~~~t~ii~~~~~---~~~TI~-------- 364 (462)
++++++|+|||++|||++++ +++++++++||+|++|++. +++++| |++| +.|||+
T Consensus 322 ---~v~k~~leria~~tGa~ivs------~l~~l~~~~LG~a~~v~~~~ig~d~~~~--i~g~~~~~~~TI~lrG~te~~ 390 (553)
T 3ko1_A 322 ---RAKKSDLEKLARATGGRVVS------NIDEISEQDLGYASLIEERKVGEDKMVF--VEGAKNPKSISILIRGGLERL 390 (553)
T ss_dssp ---CCCHHHHHHHHTTTTCCEES------CGGGCCSSSSEECSEEECCCCSSSCCEE--EESCSSSSCEEEEECCSSTTH
T ss_pred ---hhhhhhHHHHHHhhCCeeec------ccccCChhhcchHHHHHHhhcCcceEEE--eccCCCCceEEEeeeccHHHH
Confidence 67899999999999999999 8999999999999999976 455544 5564 589987
Q ss_pred ------eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHHH
Q psy2267 365 ------SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRDQ 413 (462)
Q Consensus 365 ------sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~~ 413 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++...
T Consensus 391 l~E~er~l~DAl~~~r~av~~g~iVp-----------GGGa~e~~~s~~L~~~~~~ 435 (553)
T 3ko1_A 391 VDETERALRDALGTVADVIKDGRAIA-----------GGGAVEIEIAKKLRKYAPQ 435 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEEEE-----------TTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCceec-----------CCceeEeHHHHHHHHhccc
Confidence 99999999999999999999 999999 888888876543
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=9.3e-74 Score=615.02 Aligned_cols=352 Identities=26% Similarity=0.384 Sum_probs=319.1
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcc
Q psy2267 22 AKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTN 101 (462)
Q Consensus 22 ~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~ 101 (462)
.+++.||.++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||
T Consensus 15 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd 90 (548)
T 1q3q_A 15 GTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHP----AAKMMVEVAKTQD 90 (548)
T ss_dssp TCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSH----HHHHHHHHHHHHH
T ss_pred CcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccch----HHHHHHHHHHhcC
Confidence 477899999999999999999999999999999999999999999999999999999999995 9999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHcCCC-----
Q psy2267 102 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD----- 174 (462)
Q Consensus 102 ~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~~~~----- 174 (462)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +.++|.++|+||+++|
T Consensus 91 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~ 170 (548)
T 1q3q_A 91 KEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESH 170 (548)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGG
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999999999999999999999999999987 4889999999998775
Q ss_pred -chhhhHHHHHHHHhccC--c-------eEEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEec
Q psy2267 175 -KAVGELISDAMKRVGKE--G-------VITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLS 242 (462)
Q Consensus 175 -~~i~~li~~A~~~vg~~--g-------~I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~ 242 (462)
++|++++++|+.+++++ | +|+++ +|++++| +++++||+|+++|.||||++. ++||+|+++
T Consensus 171 ~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~d-s~lv~G~v~dk~~~~~~m~~~-------ien~kIll~ 242 (548)
T 1q3q_A 171 KELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEE-SELVRGVVIDKEVVHPRMPKR-------VENAKIALI 242 (548)
T ss_dssp HHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGG-CEEESSEEESCCCSSTTSCSE-------ESSEEEEEE
T ss_pred hHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccc-eEEEeeEEEeccCCCCCCcce-------ecCCEEEEE
Confidence 67999999999999875 4 57665 9999985 899999999999999999754 456666665
Q ss_pred ccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecC
Q psy2267 243 ESK-------------ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAP 298 (462)
Q Consensus 243 d~k-------------i~s~~~i-----------~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p 298 (462)
+.+ |++++++ .++++++.+.|+||||++++|+++|+++|+.| +|+||
T Consensus 243 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av--- 313 (548)
T 1q3q_A 243 NEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKY------GIMAV--- 313 (548)
T ss_dssp CSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHT------TCEEE---
T ss_pred ecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHC------CcEEE---
Confidence 544 7788876 78899999999999999999999999999976 36886
Q ss_pred CCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE----------
Q psy2267 299 GFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK---------- 364 (462)
Q Consensus 299 ~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~---------- 364 (462)
+++++++|+|||++|||++++ +++++++++||+|++|++.+ .+..++.|++| +.|||+
T Consensus 314 --~~~~k~~le~ia~~tGa~ii~------~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~ 385 (548)
T 1q3q_A 314 --RRVKKSDMEKLAKATGAKIVT------NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNPKAVTILIRGGTEHVID 385 (548)
T ss_dssp --CSCCHHHHHHHHHHHCCCCBS------SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHH
T ss_pred --ccCCHHHHHHHHHHhCCeEec------ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCCeEEEEECCCChHHHH
Confidence 588999999999999999999 89999999999999999864 34455566775 589987
Q ss_pred ----eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHHH
Q psy2267 365 ----SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRDQ 413 (462)
Q Consensus 365 ----sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~~ 413 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++...
T Consensus 386 E~er~l~DAl~~~r~a~~~~~ivp-----------GGGa~e~~~~~~L~~~~~~ 428 (548)
T 1q3q_A 386 EVERALEDAVKVVKDVMEDGAVLP-----------AGGAPEIELAIRLDEYAKQ 428 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHSCEEEE-----------CTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCccc-----------CCcHHHHHHHHHHHHHhhh
Confidence 99999999999999999999 999999 888888877643
No 7
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.5e-73 Score=613.05 Aligned_cols=351 Identities=23% Similarity=0.350 Sum_probs=312.2
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcc
Q psy2267 22 AKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTN 101 (462)
Q Consensus 22 ~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~ 101 (462)
..++.||.++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||
T Consensus 13 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd 88 (543)
T 1a6d_B 13 GTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHP----AAKMMVEVSKTQD 88 (543)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSH----HHHHHHHHHTCTT
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccch----HHHHHHHHHHhcC
Confidence 456899999999999999999999999999999999999999999999999999999999995 9999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCC--HHHHHHHHHHHcCCC-----
Q psy2267 102 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT--PEEIAQVATISANGD----- 174 (462)
Q Consensus 102 ~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~--~~~l~~va~~s~~~~----- 174 (462)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. .++|.++|+||+++|
T Consensus 89 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~ 168 (543)
T 1a6d_B 89 SFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVA 168 (543)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGG
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccccc
Confidence 9999999999999999999999999999999999999999999999999999999874 789999999998765
Q ss_pred -chhhhHHHHHHHHhccC--ce-------EEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEec
Q psy2267 175 -KAVGELISDAMKRVGKE--GV-------ITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLS 242 (462)
Q Consensus 175 -~~i~~li~~A~~~vg~~--g~-------I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~ 242 (462)
+.|++++++|+.+++++ |. |+++ +|++++| +++++||+|+++|.||||++. ++||+|+++
T Consensus 169 ~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~d-s~lv~G~v~dk~~~~~~m~~~-------ien~kIll~ 240 (543)
T 1a6d_B 169 KDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDD-TQLINGIIVDKEKVHPGMPDV-------VKDAKIALL 240 (543)
T ss_dssp HHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGG-CEEESEEEESCCCSSTTSCSE-------EEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccc-eeEEccEEEecCCCCCCCcce-------ecCCeEEEE
Confidence 67999999999999876 63 6665 9999986 899999999999999999754 556666665
Q ss_pred ccc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecC
Q psy2267 243 ESK-------------ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAP 298 (462)
Q Consensus 243 d~k-------------i~s~~~i-----------~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p 298 (462)
+.+ |++++++ .++++++.+.|+||||++++|+++|+++|+.| +|+||
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av--- 311 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRA------GIYAV--- 311 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHT------TCEEE---
T ss_pred ecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHC------CeeEe---
Confidence 544 7777775 78999999999999999999999999999976 37886
Q ss_pred CCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE----------
Q psy2267 299 GFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK---------- 364 (462)
Q Consensus 299 ~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~---------- 364 (462)
+++++++|+|||++|||++++ +++++++++||+|++|++.+ ++..++.|++| +.|||+
T Consensus 312 --~~v~k~~le~ia~~tGa~iis------~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~ 383 (543)
T 1a6d_B 312 --RRVKKSDMDKLAKATGASIVS------TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNPKAVSILVRGETEHVVD 383 (543)
T ss_dssp --CSCCHHHHHHHHHHHTCCEES------CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSSSCEEEEEEESSHHHHH
T ss_pred --ccCCHHHHHHHHHHhCCceec------ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEecCCCHHHHH
Confidence 588999999999999999999 89999999999999999864 34455556664 589987
Q ss_pred ----eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 365 ----SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 365 ----sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
++|||||++|++++++++|| |+|+.| +++.+++++..
T Consensus 384 E~er~l~DAl~~~r~a~~~~~ivp-----------GGGa~e~~~s~~L~~~~~ 425 (543)
T 1a6d_B 384 EMERSITDSLHVVASALEDGAYAA-----------GGGATAAEIAFRLRSYAQ 425 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEEEE-----------TTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCccC-----------CccHHHHHHHHHHHHHhh
Confidence 99999999999999999999 999999 88888887764
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.1e-73 Score=614.07 Aligned_cols=350 Identities=24% Similarity=0.351 Sum_probs=315.1
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcc
Q psy2267 22 AKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTN 101 (462)
Q Consensus 22 ~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~ 101 (462)
..++.||.++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||
T Consensus 14 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd 89 (545)
T 1a6d_A 14 GTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHP----TAKMIVEVSKAQD 89 (545)
T ss_dssp ---CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSH----HHHHHHGGGGCTT
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccch----HHHHHHHHHHhcC
Confidence 456899999999999999999999999999999999999999999999999999999999995 9999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHcCCC------
Q psy2267 102 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-TPEEIAQVATISANGD------ 174 (462)
Q Consensus 102 ~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~-~~~~l~~va~~s~~~~------ 174 (462)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++| + +.++|.+||+||+++|
T Consensus 90 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~ 168 (545)
T 1a6d_A 90 TAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSN 168 (545)
T ss_dssp TCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTH
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccH
Confidence 9999999999999999999999999999999999999999999999999999999 7 8899999999998764
Q ss_pred chhhhHHHHHHHHhccC---------ceEEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecc
Q psy2267 175 KAVGELISDAMKRVGKE---------GVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSE 243 (462)
Q Consensus 175 ~~i~~li~~A~~~vg~~---------g~I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d 243 (462)
++|++|+++|+.+++++ ++|+++ +|++++| +++++||+|+++|.||||++. ++||+|++++
T Consensus 169 ~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~d-s~lv~G~v~dk~~~~~~m~~~-------ien~kIll~~ 240 (545)
T 1a6d_A 169 DFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVND-TQFISGIVIDKEKVHSKMPDV-------VKNAKIALID 240 (545)
T ss_dssp HHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTT-CEEESEEEESCCCSCTTSCSE-------EEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCcee-eEEEeeEEEeccCCCCCCcce-------ecCCEEEEEe
Confidence 67999999999999875 357765 9999986 899999999999999999754 5566666655
Q ss_pred cc-------------cCCHHhH-----------HHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCC
Q psy2267 244 SK-------------ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPG 299 (462)
Q Consensus 244 ~k-------------i~s~~~i-----------~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~ 299 (462)
.+ |++++++ .++++++.+.|+||||++++|+++|+++|+.| +|+||
T Consensus 241 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av---- 310 (545)
T 1a6d_A 241 SALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKE------GIYAV---- 310 (545)
T ss_dssp SCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHH------TCEEE----
T ss_pred cCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeeEe----
Confidence 54 6777775 78999999999999999999999999999977 36886
Q ss_pred CCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE-----------
Q psy2267 300 FGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK----------- 364 (462)
Q Consensus 300 ~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~----------- 364 (462)
+++++++|+|||++|||++++ +++++++++||+|++|++.+ .+..++.|++| +.|||+
T Consensus 311 -~~~~k~~le~ia~~tGa~iis------~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~te~~l~E 383 (545)
T 1a6d_A 311 -RRVKKSDMEKLAKATGAKIVT------DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNPKAVSILIRGGTDHVVSE 383 (545)
T ss_dssp -CSCCHHHHHHHHHHHCCCEES------SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCSSCEEEEECCSSSTTHHH
T ss_pred -ccCCHHHHHHHHHHhCCeeec------ccccCCHHHCCCceEEEEEEecCceEEEEecCCCCceEEEEEcCCCHHHHHH
Confidence 588999999999999999999 89999999999999999865 33445556654 589987
Q ss_pred ---eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 365 ---SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 365 ---sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
++|||||++|++++++++|| |+|+.| +++.+++++..
T Consensus 384 ~kr~l~DAl~~~r~a~~~g~iVp-----------GGGa~e~~~~~~L~~~~~ 424 (545)
T 1a6d_A 384 VERALNDAIRVVAITKEDGKFLW-----------GGGAVEAELAMRLAKYAN 424 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHCEEEE-----------TTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEe-----------CcCHHHHHHHHHHHHHhh
Confidence 99999999999999999999 999999 88888887653
No 9
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-73 Score=608.42 Aligned_cols=357 Identities=24% Similarity=0.349 Sum_probs=317.6
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhccc
Q psy2267 23 KDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNE 102 (462)
Q Consensus 23 k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~ 102 (462)
++..||.++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP----~Akll~~~a~~qd~ 78 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQ----IAKLMVELSKSQDD 78 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCH----HHHHHHHHHHHhhh
Confidence 45789999999999999999999999999999999999999999999999999999999995 89999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCC----HHHHHHHHHHHcCCC----
Q psy2267 103 EAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT----PEEIAQVATISANGD---- 174 (462)
Q Consensus 103 ~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~----~~~l~~va~~s~~~~---- 174 (462)
++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++. +++|.+||+||+++|
T Consensus 79 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~ 158 (515)
T 3iyg_E 79 EIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNS 158 (515)
T ss_pred hhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhH
Confidence 999999999999999999999999999999999999999999999999999998853 689999999999986
Q ss_pred --chhhhHHHHHHHHhccC-------ceE--EEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEe--
Q psy2267 175 --KAVGELISDAMKRVGKE-------GVI--TVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLL-- 241 (462)
Q Consensus 175 --~~i~~li~~A~~~vg~~-------g~I--~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili-- 241 (462)
+.|+++++||+..+.+. +.| .+..|+++.| +++++||+|+++|.||||+++.+++++.+.++++.+
T Consensus 159 ~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~d-s~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k 237 (515)
T 3iyg_E 159 CHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLED-TKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPK 237 (515)
T ss_pred HHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCccc-ceEEeeEEEecccccccccccCCCceEEEEcCcccccc
Confidence 57889999999988652 234 4467999986 999999999999999999999999888776666554
Q ss_pred ----cccccCCHHhH-----------HHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchh
Q psy2267 242 ----SESKISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 306 (462)
Q Consensus 242 ----~d~ki~s~~~i-----------~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~ 306 (462)
++.+|++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |++++. .+++
T Consensus 238 ~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~------I~~v~~-----v~k~ 306 (515)
T 3iyg_E 238 PKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQND------LPAVRW-----VGGP 306 (515)
T ss_pred ccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCC------CEEEec-----cCHH
Confidence 34568888886 578999999999999999999999999999774 567654 4589
Q ss_pred hHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee---CceEEEEecCC---CCeeEE--------------ee
Q psy2267 307 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK---DDTLILKVTSA---PPCTCK--------------SC 366 (462)
Q Consensus 307 ~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~---~~t~ii~~~~~---~~~TI~--------------sl 366 (462)
+|+|||++|||++++ +++++++++||+|++|++.+ .+..++.|++| +.|||+ ++
T Consensus 307 ~le~ia~~tGa~ii~------~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~i 380 (515)
T 3iyg_E 307 EIELIAIATGGRIVP------RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSL 380 (515)
T ss_pred HHHHHHHHhCCEEec------ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCCceEEEEEeCCcHHHHHHHHHHH
Confidence 999999999999999 89999999999999998732 11344456665 478886 99
Q ss_pred chhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 367 EKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 367 ~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
|||||++|++++|+++|| |+|+.| +++.+++++..
T Consensus 381 ~DAl~~~r~a~~~~~iVp-----------GGGa~e~~~~~~L~~~~~ 416 (515)
T 3iyg_E 381 HDALCVIRNLIRDNRVVY-----------GGGAAEISCALAVSQEAD 416 (515)
T ss_pred HHHHHHHHHHHhcCCcCC-----------CCcHHHHHHHHHHHHHhc
Confidence 999999999999999999 999999 88888877643
No 10
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.7e-73 Score=607.40 Aligned_cols=351 Identities=21% Similarity=0.307 Sum_probs=313.1
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcccc
Q psy2267 24 DVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEE 103 (462)
Q Consensus 24 ~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~~ 103 (462)
+...|.+++..|+.||+.||++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||++
T Consensus 5 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd~~ 80 (515)
T 3iyg_H 5 DSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHP----AAKTLVDIAKSQDAE 80 (515)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCH----HHHHHHHHHHHhhce
Confidence 4567899999999999999999999999999999999999999999999999999999995 899999999999999
Q ss_pred cCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--C----HHHHHHHHHHHcCCC---
Q psy2267 104 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--T----PEEIAQVATISANGD--- 174 (462)
Q Consensus 104 ~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~----~~~l~~va~~s~~~~--- 174 (462)
+||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ + ++.|.+||+||+++|
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s 160 (515)
T 3iyg_H 81 VGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLIS 160 (515)
T ss_pred eCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999999999999999999999999999999999999999999999985 5 567799999998754
Q ss_pred ---chhhhHHHHHHHHhccC---ceEEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEeccc--
Q psy2267 175 ---KAVGELISDAMKRVGKE---GVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES-- 244 (462)
Q Consensus 175 ---~~i~~li~~A~~~vg~~---g~I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~-- 244 (462)
+.||+++++|+.+++.+ |+|+++ .|+++.| +++++||+|+++|.||||+++++ .++||+|++++.
T Consensus 161 ~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~d-s~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~L 235 (515)
T 3iyg_H 161 QQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEE-SQLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVEL 235 (515)
T ss_pred ccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccc-eEEEeeeEEecCccCcccccCCc----cccccEEEEEcccc
Confidence 68999999999999876 777654 6888875 99999999999999999976543 577888888765
Q ss_pred -----------ccCCHHhH-----------HHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCC
Q psy2267 245 -----------KISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGD 302 (462)
Q Consensus 245 -----------ki~s~~~i-----------~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~ 302 (462)
+|++++++ .++++++.+.|+||||++++|++.++++|..+ +|++ +++
T Consensus 236 e~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~------gI~~-----v~~ 304 (515)
T 3iyg_H 236 ELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR------DMFC-----AGR 304 (515)
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc------CCcc-----ccc
Confidence 47888776 56799999999999999999999999998532 3555 478
Q ss_pred CchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE--------------
Q psy2267 303 NRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK-------------- 364 (462)
Q Consensus 303 ~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~-------------- 364 (462)
+++++|+|||++|||++++ +++++++++||+|++|++.+ ++..++.|++| +.|||+
T Consensus 305 ~~k~~leria~~tGa~ii~------~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~tI~lrG~t~~~l~E~kr 378 (515)
T 3iyg_H 305 VPEEDLKRTMMACGGSIQT------SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKAKTCTIILRGGAEQFMEETER 378 (515)
T ss_pred ccHHHHHHHHHHhCCEEee------ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCCceEEEEEeCCcHHHHHHHHH
Confidence 8999999999999999999 89999999999999999865 33445556775 488886
Q ss_pred eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHH
Q psy2267 365 SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIR 411 (462)
Q Consensus 365 sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~ 411 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++.
T Consensus 379 ~i~DAl~~~r~~v~~~~iVp-----------GGGa~e~~~s~~L~~~~ 415 (515)
T 3iyg_H 379 SLHDAIMIVRRAIKNDSVVA-----------GGGAIEMELSKYLRDYS 415 (515)
T ss_pred HHHHHHHHHHHHhhCCCeec-----------CCcHHHHHHHHHHHHHH
Confidence 99999999999999999999 999999 8888887764
No 11
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=1.4e-73 Score=613.11 Aligned_cols=358 Identities=24% Similarity=0.375 Sum_probs=317.2
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcc
Q psy2267 22 AKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTN 101 (462)
Q Consensus 22 ~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~ 101 (462)
..+..+|.++|..|+.||+.||++|+|||||+||||||++++|+|+|||||+||+|+|+++| |+|||++++|++||
T Consensus 11 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h----P~Akll~e~a~~qd 86 (543)
T 3ruv_A 11 NMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEH----PAAKMLIEVAKTQE 86 (543)
T ss_dssp SEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCC----HHHHHHHHHHHHHH
T ss_pred CcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcC----HHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999 59999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHcCC------
Q psy2267 102 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANG------ 173 (462)
Q Consensus 102 ~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~~~------ 173 (462)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ ++++|.+||+||+++
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~ 166 (543)
T 3ruv_A 87 KEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKA 166 (543)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGC
T ss_pred hhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchh
Confidence 999999999999999999999999999999999999999999999999999999988 789999999999987
Q ss_pred CchhhhHHHHHHHHhccC-ce-----EEE--ecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEeccc-
Q psy2267 174 DKAVGELISDAMKRVGKE-GV-----ITV--KDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES- 244 (462)
Q Consensus 174 ~~~i~~li~~A~~~vg~~-g~-----I~v--~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~- 244 (462)
+++||+++++|+.+++++ |. |++ ..|+++.| |++++||+|+++|.||||++..+++++.+.|+++.+...
T Consensus 167 ~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~d-s~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~k~e 245 (543)
T 3ruv_A 167 KEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDD-TELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETE 245 (543)
T ss_dssp CHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGG-CEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCCCCS
T ss_pred HHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCccc-ceeecceEEeccccCccccccccCcEEEEEcccccccccc
Confidence 578999999999999987 75 665 47888874 999999999999999999776555555555555444221
Q ss_pred -----ccCCHHh-----------HHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhH
Q psy2267 245 -----KISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 308 (462)
Q Consensus 245 -----ki~s~~~-----------i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~L 308 (462)
+|+++++ +.++++++.+.|+||||++++|+++|+++|+.+ +|++|+ ++++++|
T Consensus 246 ~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~~v~-----~v~k~~l 314 (543)
T 3ruv_A 246 TDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE------GIVAAR-----RVKKSDM 314 (543)
T ss_dssp SCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHH
T ss_pred cCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc------CcEEEe-----eCCHHHH
Confidence 4677776 457789999999999999999999999999743 367764 6789999
Q ss_pred HHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE--------------eechhh
Q psy2267 309 QDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK--------------SCEKAP 370 (462)
Q Consensus 309 edIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~--------------sl~DaL 370 (462)
+|||++|||++++ +++++++++||+|++|++.+ ++..++.|++| +.|||+ ++||||
T Consensus 315 e~ia~~tGa~iis------~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl 388 (543)
T 3ruv_A 315 EKLAKATGANVIA------AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAV 388 (543)
T ss_dssp HHHHHHHCCCEES------CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCceec------ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHH
Confidence 9999999999999 89999999999999999864 33345566675 589986 999999
Q ss_pred HHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 371 CITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 371 ~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
|++|++++|+++|| |+|+.| +++.+++++..
T Consensus 389 ~~~r~av~~g~iVp-----------GGGa~e~~~s~~L~~~~~ 420 (543)
T 3ruv_A 389 GVVGCTIEDGRIVS-----------GGGSTEVELSMKLREYAE 420 (543)
T ss_dssp HHHHHHHHHCEEEE-----------TTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeec-----------CCcHHHHHHHHHHHHHhh
Confidence 99999999999999 999999 88888887654
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=4.4e-73 Score=605.71 Aligned_cols=356 Identities=22% Similarity=0.250 Sum_probs=313.3
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCC--CCceEecChHHhhhccccCCccchhHHHHHHHHHhhc
Q psy2267 23 KDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSW--GSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNT 100 (462)
Q Consensus 23 k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~--g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q 100 (462)
.+..||.++|..|+.||+.||++|+|||||+||||||++++ |+|+|||||+||+|+|+++| |+|||++++|++|
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~h----p~Akll~e~a~~q 78 (513)
T 3iyg_B 3 ADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDN----PAAKVLVDMSRVQ 78 (513)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccC----HHHHHHHHHHHHh
Confidence 35789999999999999999999999999999999999999 99999999999999999999 4999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC-----CHHHHHHHHHHHcCCC-
Q psy2267 101 NEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-----TPEEIAQVATISANGD- 174 (462)
Q Consensus 101 ~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~-----~~~~l~~va~~s~~~~- 174 (462)
|+++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ +.+.|.+||+||+++|
T Consensus 79 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~ 158 (513)
T 3iyg_B 79 DDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKL 158 (513)
T ss_pred hhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999999999999999999999997 5789999999998763
Q ss_pred -----chhhhHHHHHHHHhccC---ceEEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEeccc
Q psy2267 175 -----KAVGELISDAMKRVGKE---GVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES 244 (462)
Q Consensus 175 -----~~i~~li~~A~~~vg~~---g~I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ 244 (462)
++||+++++|+.+++++ +.|.++ .|+++.| +++++||+|+++|.|| |++..+++++.+.|+++.....
T Consensus 159 ~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~d-s~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le~~k~ 236 (513)
T 3iyg_B 159 LTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLAD-SYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMDTDKI 236 (513)
T ss_pred cccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccc-eeEEeeEEEeccccCC-CceeecCceEEEEcCCcccccc
Confidence 68999999999999987 777664 6888886 9999999999999988 6654444444444443332111
Q ss_pred -------ccCCHHhHHH-----------HHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchh
Q psy2267 245 -------KISSIQSIIP-----------ALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 306 (462)
Q Consensus 245 -------ki~s~~~i~~-----------~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~ 306 (462)
++++++++.+ +++++.+.|+||||++++|+++|+++|..+ +|+|||.|+ +.
T Consensus 237 e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~------~I~av~~~~-----~~ 305 (513)
T 3iyg_B 237 KIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAA------GVMAIEHAD-----FV 305 (513)
T ss_pred cccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHc------CceEEecCC-----HH
Confidence 4788888754 788999999999999999999999999743 689999887 57
Q ss_pred hHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE--------------eech
Q psy2267 307 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK--------------SCEK 368 (462)
Q Consensus 307 ~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~--------------sl~D 368 (462)
+|+|||++|||++++ +++++++++||+|++|+... ++..++.|++| +.|||+ ++||
T Consensus 306 ~le~ia~~tGa~ii~------~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~D 379 (513)
T 3iyg_B 306 GVERLALVTGGEIAS------TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHD 379 (513)
T ss_pred HHHHHHHHhCCEEec------ccccCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 999999999999999 89999999999999998533 44456677775 478886 9999
Q ss_pred hhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 369 APCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 369 aL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
|||++|++++|+++|| |+|+.| +++.+++++..
T Consensus 380 Al~~~r~av~~~~iVp-----------GGGa~e~~~~~~L~~~~~ 413 (513)
T 3iyg_B 380 ALCVLAQTVKDSRTVY-----------GGGCSEMLMAHAVTQLAS 413 (513)
T ss_pred HHHHHHHHHhCCcEEe-----------CCcHHHHHHHHHHHHHhh
Confidence 9999999999999999 999999 88888877643
No 13
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=6.9e-75 Score=626.31 Aligned_cols=373 Identities=21% Similarity=0.273 Sum_probs=293.7
Q ss_pred hHHHhhhhhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHH
Q psy2267 15 PLLRRAYAKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQ 94 (462)
Q Consensus 15 ~~~~~~~~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~ 94 (462)
|++..+-..+..+|.++|..|+.||+.||++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++
T Consensus 4 ~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP----~Akll~ 79 (590)
T 3p9d_C 4 PVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHP----AAKSML 79 (590)
T ss_dssp --CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCH----HHHTHH
T ss_pred CeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCH----HHHHHH
Confidence 5554444567889999999999999999999999999999999999999999999999999999999995 899999
Q ss_pred HHHhhcccccCCCcchHHHHHHHHHHHhhhh-hhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHc
Q psy2267 95 DVANNTNEEAGDGTTTATVLARAIAKEGFEK-ISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISA 171 (462)
Q Consensus 95 ~~a~~q~~~~GDGTTT~vvLa~~Ll~~~~~l-i~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~ 171 (462)
++|++||+++||||||+||||++||++|.++ +++|+||+.|++||++|++.++++|+++++|++ +++.|.+||+||+
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tsl 159 (590)
T 3p9d_C 80 ELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASI 159 (590)
T ss_dssp HHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTS
T ss_pred HHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999999999999999987 3689999999998
Q ss_pred CCC------chhhhHHHHHHHHhccCce------------------EEEecCCCcccceeEEEEEEEecccCCCCccCcc
Q psy2267 172 NGD------KAVGELISDAMKRVGKEGV------------------ITVKDGKTLTDELEVIEGMKFDRGYISPYFINTA 227 (462)
Q Consensus 172 ~~~------~~i~~li~~A~~~vg~~g~------------------I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~ 227 (462)
++| +.||+|+++||.+|+++|. |.+..|+++.| +++++||+|++++.+|.|++..
T Consensus 160 sSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~d-s~lv~Gmvfdk~~~~~~m~~~~ 238 (590)
T 3p9d_C 160 GTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLD-SRVLKGVLLNKDVVHPKMSRHI 238 (590)
T ss_dssp TTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGG-CBCCSSEEECCCCSCTTSCSCE
T ss_pred hcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCccc-ceeeeEEEEecccCCCCCccee
Confidence 764 6899999999999997653 33456999886 9999999999999988776554
Q ss_pred ccceeEeeceeEEeccc------ccCCHHhHHHHH-----------HHHHhcCCCEEEEecCCchhHHHHHHhhhhccCc
Q psy2267 228 KGAKVEFQDALVLLSES------KISSIQSIIPAL-----------ELANSKRKPLVILAEDVDGEALSTLVVNRLKIGL 290 (462)
Q Consensus 228 ~~~kv~l~n~~Ili~d~------ki~s~~~i~~~l-----------e~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~ 290 (462)
+++++.+.|+++..... .+++++++.+++ +++.+.|++|||++++|+++|+++|+.|+
T Consensus 239 en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~----- 313 (590)
T 3p9d_C 239 ENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGG----- 313 (590)
T ss_dssp ESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTT-----
T ss_pred eeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhcc-----
Confidence 44444444433322111 156777765544 67888898888888889999999998653
Q ss_pred eEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCce-eeEEEE---eeCceEEEEecCCCCeeEEee
Q psy2267 291 QVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGS-VGEIVI---TKDDTLILKVTSAPPCTCKSC 366 (462)
Q Consensus 291 ~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~-a~~v~i---~~~~t~ii~~~~~~~~TI~sl 366 (462)
| ++||++++++|+|||++|||++++ +++++++++||+ |++|++ ++++++++.
T Consensus 314 -I-----~av~~~~k~~le~ia~~TGa~iis------~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~------------ 369 (590)
T 3p9d_C 314 -C-----SVLRRVKKSDNNRIARVTGATIVN------RVEDLKESDVGTNCGLFKVEMIGDEYFSFLD------------ 369 (590)
T ss_dssp -C-----CCCCCCCHHHHHHHHHHHTCCCCS------CSTTCCTTSCBCCCSEEECCEETTEECEEEC------------
T ss_pred -c-----eeeccCCHHHHHHHHHHhCCceee------cccCCCHHHhCCcCCEEEEEEEcCcEEEEEe------------
Confidence 3 347899999999999999999999 899999999999 999974 556677766
Q ss_pred chhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHHH--------------------------HHHHHHHHHHHHHhcCCh
Q psy2267 367 EKAPCITKNLITHYFIDIELLLISFDSPQGKGKKED--------------------------IDRRADQIRDQIEATTSD 420 (462)
Q Consensus 367 ~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e~--------------------------i~~r~~~~~~~~~~~~~~ 420 (462)
|.++++. |+.|++|++.|++.++|+
T Consensus 370 -----------------------------g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~ 420 (590)
T 3p9d_C 370 -----------------------------NCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGH 420 (590)
T ss_dssp -----------------------------C--------------------------------------------------
T ss_pred -----------------------------CCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCH
Confidence 6666555 999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCeEEEEeccccccccccccc
Q psy2267 421 YEREKLQERLARLASGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 421 ~~~~~l~~r~~~l~~~~a~~~vg~~~~~~~~~~~~ 455 (462)
||++ ++||+||||+|.|||+||.+++|++.
T Consensus 421 ~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr 450 (590)
T 3p9d_C 421 HHHH-----HHHGSGKACTIMLRGGSKDILNEIDR 450 (590)
T ss_dssp ------------CCCSCCCEEEECSSTTTHHHHHH
T ss_pred HHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHH
Confidence 9977 48999999999999999999999875
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=8.5e-74 Score=612.90 Aligned_cols=349 Identities=22% Similarity=0.313 Sum_probs=313.3
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcc
Q psy2267 22 AKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTN 101 (462)
Q Consensus 22 ~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~ 101 (462)
.++..||.++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||
T Consensus 11 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~akll~e~a~~qd 86 (528)
T 3p9d_D 11 FKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHP----VARMLVEVSAAQD 86 (528)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCT----THHHHHHHHHHHH
T ss_pred cchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCH----HHHHHHHHHHHhh
Confidence 478899999999999999999999999999999999999999999999999999999999996 8999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHcCCC-----
Q psy2267 102 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD----- 174 (462)
Q Consensus 102 ~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~~~~----- 174 (462)
+++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ +.+.|.+||+||+++|
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 166 (528)
T 3p9d_D 87 SEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQY 166 (528)
T ss_dssp HHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTT
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchh
Confidence 999999999999999999999999999999999999999999999999999999998 7899999999999984
Q ss_pred -chhhhHHHHHHHHhcc--CceEEE-------ecCCCcccceeEEEEEEEecccCCCC-ccCccccceeEeeceeEEecc
Q psy2267 175 -KAVGELISDAMKRVGK--EGVITV-------KDGKTLTDELEVIEGMKFDRGYISPY-FINTAKGAKVEFQDALVLLSE 243 (462)
Q Consensus 175 -~~i~~li~~A~~~vg~--~g~I~v-------~~G~~~~des~lv~G~~~d~g~~sp~-~~~~~~~~kv~l~n~~Ili~d 243 (462)
++||+|+++||.++++ +|.|.+ ..|++++| +++++||+|+++|.||| |++. ++||+|++++
T Consensus 167 ~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~d-s~lv~G~v~dk~~~~~~~m~~~-------ien~kIll~~ 238 (528)
T 3p9d_D 167 SSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDD-TEMIDGVVLTQTAIKSAGGPTR-------KEKAKIGLIQ 238 (528)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCC-CEEESSCBCCCCCCCSSSCCSE-------ESSEEEEEEC
T ss_pred HHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccc-eEEEeeeEEeecccCcccCccc-------ccCceEEEEe
Confidence 7899999999999987 454433 35999985 99999999999999999 5554 5555555544
Q ss_pred cc-------------cCCHHh-----------HHHHHHHHHhcCCCEEEEecCC-----chhHHHHHHhhhhccCceEEE
Q psy2267 244 SK-------------ISSIQS-----------IIPALELANSKRKPLVILAEDV-----DGEALSTLVVNRLKIGLQVAA 294 (462)
Q Consensus 244 ~k-------------i~s~~~-----------i~~~le~i~~~g~~lvIia~~I-----~~~aL~~L~~Nk~~~~~~v~a 294 (462)
.+ ++++++ +.++++++.+.|+||||++++| +++|+++|..| +|+|
T Consensus 239 ~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~------~I~a 312 (528)
T 3p9d_D 239 FQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKL------NIMV 312 (528)
T ss_dssp CCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTT------SCCE
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHc------CcEE
Confidence 33 335543 6789999999999999999999 99999999865 4788
Q ss_pred EecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCCC------CeeEE---
Q psy2267 295 VKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSAP------PCTCK--- 364 (462)
Q Consensus 295 Vk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~~------~~TI~--- 364 (462)
|+ +.++++|+|||++|||++++ +++++++++||+|++|++.+ +++.+++|++|+ .|||+
T Consensus 313 v~-----~~~k~~le~ia~~tGa~ii~------~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG 381 (528)
T 3p9d_D 313 VK-----DIEREEIEFLSKGLGCKPIA------DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRG 381 (528)
T ss_dssp EE-----CCCTHHHHHHHHHHTCCCCS------CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCC
T ss_pred EE-----eCCHHHHHHHHHHHCCEEec------ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcC
Confidence 76 66799999999999999999 78999999999999999864 777888888753 68886
Q ss_pred -----------eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHH
Q psy2267 365 -----------SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQI 410 (462)
Q Consensus 365 -----------sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~ 410 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++
T Consensus 382 ~te~~l~E~kr~i~DAl~~~r~av~~~~iVp-----------GGGa~e~~~s~~L~~~ 428 (528)
T 3p9d_D 382 ANNMIIDETERSLHDALCVIRCLVKERGLIA-----------GGGAPEIEISRRLSKE 428 (528)
T ss_dssp SSTTHHHHHHHHHTTTHHHHHHHHHSSCEEE-----------TTTHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcCCccC-----------CCCHHHHHHHHHHHHH
Confidence 99999999999999999999 999999 777777764
No 15
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.2e-73 Score=615.06 Aligned_cols=360 Identities=20% Similarity=0.303 Sum_probs=314.7
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcc
Q psy2267 22 AKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTN 101 (462)
Q Consensus 22 ~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~ 101 (462)
++++.||.++|..|+.||+.||++|+|||||+||||||++++|+|+|||||+||||+|+++|| +|||++++|++||
T Consensus 16 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd 91 (559)
T 3p9d_A 16 GGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHP----AGKILVELAQQQD 91 (559)
T ss_dssp SCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSH----HHHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCH----HHHHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999999999999995 8999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhh-cCCCCCC--HHHHHHHHHHHcCC-----
Q psy2267 102 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKE-LSKPVTT--PEEIAQVATISANG----- 173 (462)
Q Consensus 102 ~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~-~s~~v~~--~~~l~~va~~s~~~----- 173 (462)
+++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|++ +++|++. .+.|.+||+||+++
T Consensus 92 ~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~ 171 (559)
T 3p9d_A 92 REIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGA 171 (559)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGT
T ss_pred HHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccc
Confidence 999999999999999999999999999999999999999999999999999 9999984 78899999999998
Q ss_pred -CchhhhHHHHHHHHhcc-----Cce-----EE--EecCCCcccceeEEEEEEEecccCCCCccCccc--cceeEeecee
Q psy2267 174 -DKAVGELISDAMKRVGK-----EGV-----IT--VKDGKTLTDELEVIEGMKFDRGYISPYFINTAK--GAKVEFQDAL 238 (462)
Q Consensus 174 -~~~i~~li~~A~~~vg~-----~g~-----I~--v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~--~~kv~l~n~~ 238 (462)
+++||+|+++||.++++ +|. |. +..|++++| |++++||+|+++|.||||++..+ ++++.+.+++
T Consensus 172 ~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~d-s~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~ 250 (559)
T 3p9d_A 172 DSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATE-SLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLN 250 (559)
T ss_dssp THHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSC-CBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTC
T ss_pred hhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccc-eeEeccEEEeecccCCCcceeeccCCceEEEEecc
Confidence 47899999999999984 254 33 345999986 99999999999999999987665 5555555555
Q ss_pred EEecccc------cCCHHh-----------HHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCC
Q psy2267 239 VLLSESK------ISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFG 301 (462)
Q Consensus 239 Ili~d~k------i~s~~~-----------i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g 301 (462)
+.....+ ++++++ +.++++++.+.|+||||++++|+++|+++|+.|+ |+|| +
T Consensus 251 Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~------I~av-----~ 319 (559)
T 3p9d_A 251 LQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAK------IMGV-----R 319 (559)
T ss_dssp CSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTT------CEEE-----S
T ss_pred ccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcC------CceE-----c
Confidence 4332111 345544 5788999999999999999999999999999874 5665 6
Q ss_pred CCchhhHHHHHHHhCCeEeccCCCCCcc-CCCCCCCCceeeEEEE---eeCceEEEEecCC---CCeeEE----------
Q psy2267 302 DNRKATLQDLAVATGGIVFGDEASPVKL-EDLQATDLGSVGEIVI---TKDDTLILKVTSA---PPCTCK---------- 364 (462)
Q Consensus 302 ~~rk~~LedIa~~TGa~vis~~~~~~~l-~~~~~~~LG~a~~v~i---~~~~t~ii~~~~~---~~~TI~---------- 364 (462)
++++++|+|||++|||+++++. .++.+ +++++++||+|++|++ ++++++ .|++| ..|||+
T Consensus 320 ~~~k~~le~ia~~TGa~iis~~-~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~--~~~g~~~~~~~tI~lrG~te~~l~ 396 (559)
T 3p9d_A 320 RCKKEDLRRIARATGATLVSSM-SNLEGEETFESSYLGLCDEVVQAKFSDDECI--LIKGTSKHSSSSIILRGANDYSLD 396 (559)
T ss_dssp SCCHHHHHHHHHHSSCCCBCCS-CCSTTCCCCCTTTSCCEEEEEEEECSSCEEE--CEEEESSSCCCCEEEEESCHHHHH
T ss_pred cCCHHHHHHHHHHhCCEEEecc-ccccccccCCHhHCccceEEEEEEEcCceEE--EEEcCCCCCEEEEEEcCCCHHHHH
Confidence 8899999999999999999954 34443 7899999999999995 444444 45554 589986
Q ss_pred ----eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHH
Q psy2267 365 ----SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIR 411 (462)
Q Consensus 365 ----sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~ 411 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++.
T Consensus 397 E~kr~l~DAL~~~r~av~~g~iVp-----------GGGa~e~~~s~~L~~~~ 437 (559)
T 3p9d_A 397 EMERSLHDSLSVVKRTLESGNVVP-----------GGGCVEAALNIYLDNFA 437 (559)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCEEC-----------TTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCEEe-----------CccHHHHHHHHHHHHHh
Confidence 99999999999999999999 999999 7888887664
No 16
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.7e-72 Score=601.31 Aligned_cols=353 Identities=19% Similarity=0.257 Sum_probs=318.5
Q ss_pred hhccc-HHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhccc
Q psy2267 24 DVRFG-PEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNE 102 (462)
Q Consensus 24 ~~~~g-~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~ 102 (462)
+...| +++|..|+.||+.||++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||+
T Consensus 4 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd~ 79 (512)
T 3iyg_Q 4 KHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHP----AAKMIVMASHMQEQ 79 (512)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCH----HHHHHHHHHHHhhh
Confidence 34577 79999999999999999999999999999999999999999999999999999995 89999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhc----CCCCCCHHHHHHHHHHHcCC-----
Q psy2267 103 EAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKEL----SKPVTTPEEIAQVATISANG----- 173 (462)
Q Consensus 103 ~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~----s~~v~~~~~l~~va~~s~~~----- 173 (462)
++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++ +.+++++++|.+||+||+++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~ 159 (512)
T 3iyg_Q 80 EVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGN 159 (512)
T ss_pred hhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccc
Confidence 999999999999999999999999999999999999999999999999998 56778999999999999998
Q ss_pred CchhhhHHHHHHHHhccC-ceEE-------EecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEE--ecc
Q psy2267 174 DKAVGELISDAMKRVGKE-GVIT-------VKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVL--LSE 243 (462)
Q Consensus 174 ~~~i~~li~~A~~~vg~~-g~I~-------v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Il--i~d 243 (462)
+++||+|+++||.+++++ |.|. +..|+++. ++++++||+||++|.| |+++.+++++.+.++++. .++
T Consensus 160 ~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~-ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e 236 (512)
T 3iyg_Q 160 EVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVH-SSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITE 236 (512)
T ss_pred hHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcc-cceEEeeEEEecCcCC--CCcccccCceEEEeccccccccc
Confidence 578999999999999986 4433 34699986 5999999999999986 999999999987776654 467
Q ss_pred cc----cCCHHhHHHH-------HH----HHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhH
Q psy2267 244 SK----ISSIQSIIPA-------LE----LANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 308 (462)
Q Consensus 244 ~k----i~s~~~i~~~-------le----~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~L 308 (462)
.+ |++++++.++ ++ ++.+.|+||||++++|++.++++|. +. +|+|||.|+ +.+|
T Consensus 237 ~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~--k~----~I~av~~~~-----~~dl 305 (512)
T 3iyg_Q 237 TKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYAN--KY----NIMLVRLNS-----KWDL 305 (512)
T ss_pred ccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHH--HC----CeEEEEeCC-----HHHH
Confidence 77 8999998776 55 8888999999999999999999985 32 699999886 5789
Q ss_pred HHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC----CCeeEE--------------eechh
Q psy2267 309 QDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA----PPCTCK--------------SCEKA 369 (462)
Q Consensus 309 edIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~----~~~TI~--------------sl~Da 369 (462)
+|||++|||++++ +++++++++||+|++|++.+ .+..++.|++| ..|||+ ++|||
T Consensus 306 e~ia~~tGa~iis------~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DA 379 (512)
T 3iyg_Q 306 RRLCKTVGATALP------RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDG 379 (512)
T ss_pred HHHHHHhCCEEec------ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHH
Confidence 9999999999999 89999999999999999876 46677888876 368886 99999
Q ss_pred hHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHH
Q psy2267 370 PCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIR 411 (462)
Q Consensus 370 L~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~ 411 (462)
||++|++++|+++|| |+|+.| +++.+++++.
T Consensus 380 l~~~r~a~~~~~iVp-----------GGGa~e~~~s~~L~~~~ 411 (512)
T 3iyg_Q 380 VNTFKVLTRDKRLVP-----------GGGATEIELAKQITSYG 411 (512)
T ss_pred HHHHHHHHhCCCEec-----------CCcHHHHHHHHHHHHHh
Confidence 999999999999999 999999 8888887764
No 17
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-72 Score=600.38 Aligned_cols=363 Identities=21% Similarity=0.294 Sum_probs=316.8
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhccc
Q psy2267 23 KDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNE 102 (462)
Q Consensus 23 k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~ 102 (462)
.+..+|.++|..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP----~akll~~~a~~qd~ 78 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP----AAKVLCELADLQDK 78 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCh----HHHHHHHHHHHhhh
Confidence 35789999999999999999999999999999999999999999999999999999999995 99999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhh-cCCCCC--CHHHHHHHHHHHcCC------
Q psy2267 103 EAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKE-LSKPVT--TPEEIAQVATISANG------ 173 (462)
Q Consensus 103 ~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~-~s~~v~--~~~~l~~va~~s~~~------ 173 (462)
++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|++ +++|++ +++.|.+||+||+++
T Consensus 79 e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 79 EVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999999999999999999 999988 789999999999976
Q ss_pred CchhhhHHHHHHHHhc---cCc-----e--EE--EecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEe
Q psy2267 174 DKAVGELISDAMKRVG---KEG-----V--IT--VKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLL 241 (462)
Q Consensus 174 ~~~i~~li~~A~~~vg---~~g-----~--I~--v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili 241 (462)
+++||+++++|+.+++ ++| . |+ +..|+++.| |++++||+|+++|.||||++..+++++.+.|+++..
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~d-s~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~ 237 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQME-SMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQK 237 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccc-eEEEeeeEEecCcccccCCcccCCceEEEecCCccc
Confidence 3789999999999998 344 2 44 468999886 999999999999999999999888888888888766
Q ss_pred cccc------cCCHHh-----------HHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCc
Q psy2267 242 SESK------ISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNR 304 (462)
Q Consensus 242 ~d~k------i~s~~~-----------i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~r 304 (462)
...+ ++++++ +.++++++.+.|+||||++++|+++|+++|+.| +|+||+ +++
T Consensus 238 ~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~------gI~av~-----~v~ 306 (529)
T 3iyg_A 238 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEA------GAMAVR-----RVL 306 (529)
T ss_pred ccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHc------CCceec-----cCC
Confidence 4332 344433 457889999999999999999999999999877 478865 788
Q ss_pred hhhHHHHHHHhCCeEeccCCCCCc-cCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE--------------e
Q psy2267 305 KATLQDLAVATGGIVFGDEASPVK-LEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK--------------S 365 (462)
Q Consensus 305 k~~LedIa~~TGa~vis~~~~~~~-l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~--------------s 365 (462)
+++|+|||++|||+++++. .+++ ++++++++||+|++|+..+ ++..++.|++| +.|||+ +
T Consensus 307 k~~leria~~tGa~iv~~~-~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~ 385 (529)
T 3iyg_A 307 KRDLKRIAKASGATVLSTL-ANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKARTSASVILRGANDFMCDEMERS 385 (529)
T ss_pred HHHHHHHHHHhCCeeecch-hcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCCceEEEEECCchHHHHHHHHHH
Confidence 9999999999999999943 1111 2345678999999998432 23344556665 488986 9
Q ss_pred echhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHHH
Q psy2267 366 CEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRDQ 413 (462)
Q Consensus 366 l~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~~ 413 (462)
+|||||++|++++|+++|| |+|+.| +++.+++++...
T Consensus 386 l~Dal~v~r~~v~~~~iVp-----------GGGa~E~~ls~~L~~~~~~ 423 (529)
T 3iyg_A 386 LHDALCVVKRVLESKSVVP-----------GGGAVEAALSIYLENYATS 423 (529)
T ss_pred HHHHHHHHHHHhhCCeEEe-----------CCcHHHHHHHHHHHHHhhh
Confidence 9999999999999999999 999999 888888877544
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.3e-72 Score=600.86 Aligned_cols=356 Identities=21% Similarity=0.312 Sum_probs=317.8
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhccc
Q psy2267 23 KDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNE 102 (462)
Q Consensus 23 k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~ 102 (462)
++..+|.++|..|+.||+.||++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||+
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~akll~~~a~~qd~ 79 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHP----AARMLVELSKAQDI 79 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchH----HHHHHHHHHHHhhh
Confidence 45678999999999999999999999999999999999999999999999999999999995 89999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHcCCC------
Q psy2267 103 EAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------ 174 (462)
Q Consensus 103 ~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~~~~------ 174 (462)
++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ ++++|.+||+||+++|
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 80 EAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred hhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999999998 7899999999999987
Q ss_pred chhhhHHHHHHHHhcc---Cce-----EEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEe---
Q psy2267 175 KAVGELISDAMKRVGK---EGV-----ITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLL--- 241 (462)
Q Consensus 175 ~~i~~li~~A~~~vg~---~g~-----I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili--- 241 (462)
++||+|+++||.++++ +|. |+++ .|++..| +++++||+|+++|.| +|++..+++++.+.++.+..
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~d-s~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~Le~~k~ 237 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDD-CELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKT 237 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhh-heEeccEEEeccccc-CCCccccCceEEEEEeecccccc
Confidence 7899999999999985 554 5553 6888875 999999999999999 77777777777666665543
Q ss_pred -ccc--ccCCHHh-----------HHHHHHHHHhcCCCEEEE-----ecCCchhHHHHHHhhhhccCceEEEEecCCCCC
Q psy2267 242 -SES--KISSIQS-----------IIPALELANSKRKPLVIL-----AEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGD 302 (462)
Q Consensus 242 -~d~--ki~s~~~-----------i~~~le~i~~~g~~lvIi-----a~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~ 302 (462)
++. +++++++ +.++++++.+.|+||||+ +++|+++|+++|+.| +|+|||.|+
T Consensus 238 ~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~--- 308 (518)
T 3iyg_D 238 DMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVKDIE--- 308 (518)
T ss_pred ccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEecCC---
Confidence 233 4677754 578899999999999999 899999999999865 589999886
Q ss_pred CchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-Cc-eEEEEecCC----CCeeEE------------
Q psy2267 303 NRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DD-TLILKVTSA----PPCTCK------------ 364 (462)
Q Consensus 303 ~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~-t~ii~~~~~----~~~TI~------------ 364 (462)
+.+|+|||++|||++++ +++++++++||+|++|++.+ ++ ..++.|++| ..|||+
T Consensus 309 --~~~le~ia~~tGa~ii~------~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~ 380 (518)
T 3iyg_D 309 --REDIEFICKTIGTKPVA------HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEA 380 (518)
T ss_pred --HHHHHHHHHHhCCEEec------ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHH
Confidence 57899999999999999 79999999999999999865 33 367778876 368886
Q ss_pred --eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 365 --SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 365 --sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++..
T Consensus 381 kr~l~DAl~~~r~av~~~~iVp-----------GGGa~e~~~~~~L~~~~~ 420 (518)
T 3iyg_D 381 ERSIHDALCVIRCLVKKRALIA-----------GGGAPEIELALRLTEYSR 420 (518)
T ss_pred HHHHHHHHHHHHHHHhCCCEee-----------cCcHHHHHHHHHHHHHhh
Confidence 99999999999999999999 999999 88888877643
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.2e-72 Score=607.71 Aligned_cols=357 Identities=24% Similarity=0.377 Sum_probs=314.6
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhccc
Q psy2267 23 KDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNE 102 (462)
Q Consensus 23 k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~ 102 (462)
+++.||.++|..|+.||+.||++|||||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||+
T Consensus 38 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd~ 113 (562)
T 3p9d_E 38 KKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNE----IAKLLVQLSKSQDD 113 (562)
T ss_dssp CSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSH----HHHHHHHHHHHHHH
T ss_pred ceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCH----HHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999999999999999999995 99999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCCH------HHHHHHHHHHcCCC--
Q psy2267 103 EAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTP------EEIAQVATISANGD-- 174 (462)
Q Consensus 103 ~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~~------~~l~~va~~s~~~~-- 174 (462)
++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|+++. +.|.+||+||+++|
T Consensus 114 e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i 193 (562)
T 3p9d_E 114 EIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIV 193 (562)
T ss_dssp HTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTT
T ss_pred hcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchh
Confidence 9999999999999999999999999999999999999999999999999999998632 68999999999986
Q ss_pred ----chhhhHHHHHHHHhccC-------ce--EEEecCCCcccceeEEEEEEEecccCCCCccCcc------ccceeEee
Q psy2267 175 ----KAVGELISDAMKRVGKE-------GV--ITVKDGKTLTDELEVIEGMKFDRGYISPYFINTA------KGAKVEFQ 235 (462)
Q Consensus 175 ----~~i~~li~~A~~~vg~~-------g~--I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~------~~~kv~l~ 235 (462)
+.|+++++||+..+.+. +. |.+..|++++| +++++||+|+++|.||||+++. ++.++.+.
T Consensus 194 ~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~d-s~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall 272 (562)
T 3p9d_E 194 SKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISD-SKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAIL 272 (562)
T ss_dssp TTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGG-CEEESSEEESSCCCTTSCCC-----TTCSSCEECEE
T ss_pred HHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhh-hceeeeEEEecCCCCCCcCcccccccccccceEEEe
Confidence 46899999999998752 23 44568999986 8999999999999999999998 78888766
Q ss_pred ceeEEec------ccccCCHHh-----------HHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecC
Q psy2267 236 DALVLLS------ESKISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAP 298 (462)
Q Consensus 236 n~~Ili~------d~ki~s~~~-----------i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p 298 (462)
++++.+. +.+|+++++ +.++++++.+.|+||||++++|+++|+++|+.|++ ++|+
T Consensus 273 ~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I------~~v~-- 344 (562)
T 3p9d_E 273 TCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDL------PAVR-- 344 (562)
T ss_dssp ESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTC------CCEE--
T ss_pred cccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCC------EEEe--
Confidence 6655442 246888877 56889999999999999999999999999997754 5555
Q ss_pred CCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee---CceEEEEecCC---CCeeEE--------
Q psy2267 299 GFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK---DDTLILKVTSA---PPCTCK-------- 364 (462)
Q Consensus 299 ~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~---~~t~ii~~~~~---~~~TI~-------- 364 (462)
+.++++|+|||++|||++++ +++++++++||+|++|++.+ .+..++.|++| +.|||+
T Consensus 345 ---~v~k~~le~ia~~TGa~iis------~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~ 415 (562)
T 3p9d_E 345 ---WVGGQELEHIAISTNGRIVP------RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMI 415 (562)
T ss_dssp ---CCCTTTHHHHHHHHCCCEEE------SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTT
T ss_pred ---ccCHHHHHHHHHHhCCEEEe------ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHH
Confidence 44689999999999999999 89999999999999999832 11234445665 588986
Q ss_pred ------eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 365 ------SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 365 ------sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++..
T Consensus 416 l~E~kr~i~DAL~~~r~av~~g~iVp-----------GGGa~e~~~s~~L~~~~~ 459 (562)
T 3p9d_E 416 VDEAERALHDSLCVVRNLVKDSRVVY-----------GGGAAEVTMSLAVSEEAD 459 (562)
T ss_dssp HHHHTHHHHHHHHHHHHHHHSCCEEE-----------TTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCC-----------CCcHHHHHHHHHHHHHhc
Confidence 99999999999999999999 999999 88888887644
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=7e-73 Score=606.15 Aligned_cols=358 Identities=20% Similarity=0.253 Sum_probs=315.5
Q ss_pred hhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEec-CCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhc
Q psy2267 22 AKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQ-SWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNT 100 (462)
Q Consensus 22 ~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~-~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q 100 (462)
.+++.||.++|..|+.||+.||++|+|||||+||||||++ ++|+|+|||||+||+|+|+++| |+|||++++|++|
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~h----P~Akll~e~a~~q 84 (527)
T 3p9d_B 9 QVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDN----PAAKVLVNISKVQ 84 (527)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCC----HHHHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCC----HHHHHHHHHHHHh
Confidence 3678999999999999999999999999999999999999 8999999999999999999999 5999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHhhhhhhc-CCChHHHHHHHHHHHHHHHHHHhhcCCCCCC-----HHHHHHHHHHHcCC-
Q psy2267 101 NEEAGDGTTTATVLARAIAKEGFEKISK-GANPIEIRRGVMLAVETIKTHLKELSKPVTT-----PEEIAQVATISANG- 173 (462)
Q Consensus 101 ~~~~GDGTTT~vvLa~~Ll~~~~~li~~-G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~~s~~~- 173 (462)
|+++||||||+||||++||++|.+++++ |+||+.|++||++|++.++++|+++++|+++ +++|.+||+||+++
T Consensus 85 d~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK 164 (527)
T 3p9d_B 85 DDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSK 164 (527)
T ss_dssp HHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred HhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccC
Confidence 9999999999999999999999999999 9999999999999999999999999999985 78999999999998
Q ss_pred -----CchhhhHHHHHHHHhccCc---eEEEe--cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEe--
Q psy2267 174 -----DKAVGELISDAMKRVGKEG---VITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLL-- 241 (462)
Q Consensus 174 -----~~~i~~li~~A~~~vg~~g---~I~v~--~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili-- 241 (462)
+++||+|+++||.+|+++| +|+++ .|+++.| +++++||+||++|.||| ++..+++++.+.++.+..
T Consensus 165 ~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~d-s~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~le~~k 242 (527)
T 3p9d_B 165 ILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSD-SFLDEGFILAKKFGNNQ-PKRIENAKILIANTTLDTDK 242 (527)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSC-CCEESSCCCSCCCSSSC-CSCCSSCEEEEECSCSSCCC
T ss_pred cccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCccc-cEEEEeEEEecccCCCC-CeeeecceEEEecccccccc
Confidence 4689999999999999987 67664 6888875 99999999999999998 776666666665554433
Q ss_pred ---cccc--cCCHHhH-----------HHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCch
Q psy2267 242 ---SESK--ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 305 (462)
Q Consensus 242 ---~d~k--i~s~~~i-----------~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk 305 (462)
++.+ +++++++ .+.++++.+.|+||||++++|+++++++|..| +|++|+.| ++
T Consensus 243 ~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~------~i~av~~~-----~~ 311 (527)
T 3p9d_B 243 VKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDL------GINSIEHA-----DF 311 (527)
T ss_dssp CSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHT------CBCCCCCC-----HH
T ss_pred ccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHC------CCEEEecC-----CH
Confidence 3344 6777765 57889999999999999999999999999876 47887765 47
Q ss_pred hhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE--------------eec
Q psy2267 306 ATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK--------------SCE 367 (462)
Q Consensus 306 ~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~--------------sl~ 367 (462)
.+|+|||++|||++++ +++++++++||+|++|+... ++..++.|++| ..|||+ ++|
T Consensus 312 ~dle~ia~~tGa~iv~------~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~ 385 (527)
T 3p9d_B 312 EGVERLALVTGGEVVS------TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLH 385 (527)
T ss_dssp HHHHHHHHHTCCCCCS------TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHH
T ss_pred HHHHHHHHHhCCEEec------chhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHH
Confidence 8899999999999999 78999999999999998432 23345557776 478886 999
Q ss_pred hhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHHH
Q psy2267 368 KAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRDQ 413 (462)
Q Consensus 368 DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~~ 413 (462)
||||++|++++++++|| |+|+.| +++.+++++...
T Consensus 386 DAl~~~r~av~~g~iVp-----------GGGa~e~~~s~~L~~~~~~ 421 (527)
T 3p9d_B 386 DALSVLSQTTKETRTVL-----------GGGCAEMVMSKAVDTEAQN 421 (527)
T ss_dssp HHHHHHHHHHHCCCEEE-----------TTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCccc-----------CCcHHHHHHHHHHHHHHhc
Confidence 99999999999999999 999999 888888876543
No 21
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.3e-73 Score=609.12 Aligned_cols=360 Identities=19% Similarity=0.276 Sum_probs=312.5
Q ss_pred hHHHhhhhhhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHH
Q psy2267 15 PLLRRAYAKDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQ 94 (462)
Q Consensus 15 ~~~~~~~~k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~ 94 (462)
|+....-..+..+|.++|..|+.||+.||++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++
T Consensus 9 ~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP----~Akll~ 84 (550)
T 3p9d_G 9 TIVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHP----AAKTLV 84 (550)
T ss_dssp -------CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSH----HHHHHH
T ss_pred chhhhcCCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCH----HHHHHH
Confidence 3333333456789999999999999999999999999999999999999999999999999999999995 999999
Q ss_pred HHHhhcccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCCC-----HHHHHHHHHH
Q psy2267 95 DVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT-----PEEIAQVATI 169 (462)
Q Consensus 95 ~~a~~q~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~~ 169 (462)
++|++||+++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++. .++|.+||+|
T Consensus 85 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~t 164 (550)
T 3p9d_G 85 DISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCART 164 (550)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHH
T ss_pred HHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999863 6789999999
Q ss_pred HcCC------CchhhhHHHHHHHHhccC-------ceEEEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeec
Q psy2267 170 SANG------DKAVGELISDAMKRVGKE-------GVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQD 236 (462)
Q Consensus 170 s~~~------~~~i~~li~~A~~~vg~~-------g~I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n 236 (462)
|+++ +++||+|++||+.+|+++ ++++ .+|++++| +++++||+|+++|.||||++.+++ ++|
T Consensus 165 sl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vik-v~Gg~~~d-s~lv~G~~~dk~~~s~yf~~~~~~----~en 238 (550)
T 3p9d_G 165 AMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKK-IPGGAMEE-SLFINGVAFKKTFSYAGFEQQPKK----FNN 238 (550)
T ss_dssp HHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCB-CCSSCGGG-CCCCSSEEECCCSSCTTCSCSCSC----CSS
T ss_pred hccCccccccHhHHHHHHHHHHHHhCccccCchheeEEE-ecCCCccc-eeEEeeEEEeccccccccccCccc----ccC
Confidence 9876 478999999999999853 3344 45999987 799999999999999999876554 889
Q ss_pred eeEEecccc-------------cCCHHhHHH-----------HHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceE
Q psy2267 237 ALVLLSESK-------------ISSIQSIIP-----------ALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQV 292 (462)
Q Consensus 237 ~~Ili~d~k-------------i~s~~~i~~-----------~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v 292 (462)
|+|++++.+ |++++++.+ .++++.+.|++|||++++|++.++++|..+ +|
T Consensus 239 ~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~------gI 312 (550)
T 3p9d_G 239 PKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR------NI 312 (550)
T ss_dssp CCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG------TC
T ss_pred ceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc------CC
Confidence 999987765 567766544 677888999999999999999999998632 35
Q ss_pred EEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC---CCeeEE----
Q psy2267 293 AAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK---- 364 (462)
Q Consensus 293 ~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~---- 364 (462)
+++ |++++++|+|||++|||++++ +++++++++||+|++|++.+ .+..+..|++| +.|||+
T Consensus 313 ~~v-----~~v~k~~lerIa~~tGa~iis------~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~~~~tI~lrG~ 381 (550)
T 3p9d_G 313 FCA-----GRVSADDMNRVIQAVGGSIQS------TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQAKTCTLLLRGG 381 (550)
T ss_dssp EEE-----ECCCTTHHHHHHHHTCCCCBS------SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTCCCCCCCBCSS
T ss_pred ccc-----cCcCHHHHHHHHHHhCCceec------chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCCceeEEEEeCC
Confidence 664 688899999999999999999 89999999999999998754 33456667786 488886
Q ss_pred ----------eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 365 ----------SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 365 ----------sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++..
T Consensus 382 te~~l~E~kr~l~DAl~~~r~av~~g~iVp-----------GGGa~e~~~s~~L~~~~~ 429 (550)
T 3p9d_G 382 AEQVIAEVERSLHDAIMIVKRALQNKLIVA-----------GGGATEMEVSKCLRDYSK 429 (550)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHSCCEEE-----------TTTHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhHHHHHHHHHhcCCccc-----------CCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999 999999 88888877643
No 22
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.7e-70 Score=586.01 Aligned_cols=355 Identities=21% Similarity=0.309 Sum_probs=312.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcccc
Q psy2267 24 DVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEE 103 (462)
Q Consensus 24 ~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~~ 103 (462)
+...|.++|..|+.||+.||++|||||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||++
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd~e 78 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHP----AAKSMIEISRTQDEE 78 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCH----HHHHHHHHHHHhhhh
Confidence 4567899999999999999999999999999999999999999999999999999999995 899999999999999
Q ss_pred cCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHcCCC------c
Q psy2267 104 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------K 175 (462)
Q Consensus 104 ~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~~~~------~ 175 (462)
+||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++| +
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~ 158 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSS 158 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999987 4789999999999876 3
Q ss_pred hhhhHHHHHHHHhccC--c----------eEEEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecc
Q psy2267 176 AVGELISDAMKRVGKE--G----------VITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSE 243 (462)
Q Consensus 176 ~i~~li~~A~~~vg~~--g----------~I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d 243 (462)
.+++++++|+..+.++ | .|.+.+|++++| |++++||+|+++|.||+|++..+++++.+.|+++....
T Consensus 159 ~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~d-s~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k 237 (515)
T 3iyg_G 159 LACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIED-SCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKK 237 (515)
T ss_pred HHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCccc-ceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccccc
Confidence 5678999999988732 2 134468999985 99999999999999999876655555555555544422
Q ss_pred c------ccCCHHhHHHHHH-----------HHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchh
Q psy2267 244 S------KISSIQSIIPALE-----------LANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 306 (462)
Q Consensus 244 ~------ki~s~~~i~~~le-----------~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~ 306 (462)
. +|++++++.++++ ++.+.|++|||++++|++.++++|..+ +|+|| ||++++
T Consensus 238 ~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~k~ 306 (515)
T 3iyg_G 238 GESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVRKT 306 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCCHH
Confidence 1 5889999888776 888899999999999999999999743 57774 789999
Q ss_pred hHHHHHHHhCCeEeccCCCCCccCCCCCCCCce-eeEEEEee-CceEEEEecCC---CCeeEE--------------eec
Q psy2267 307 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGS-VGEIVITK-DDTLILKVTSA---PPCTCK--------------SCE 367 (462)
Q Consensus 307 ~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~-a~~v~i~~-~~t~ii~~~~~---~~~TI~--------------sl~ 367 (462)
+|+|||++|||++++ +++++++++||+ |+.|++.+ ++..++.|++| +.|||+ ++|
T Consensus 307 ~leria~~tGa~ii~------~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~~~~TIllrG~t~~~l~E~er~i~ 380 (515)
T 3iyg_G 307 DNNRIARACGARIVS------RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDPKACTILLRGASKEILSEVERNLQ 380 (515)
T ss_pred HHHHHHHHhCCeeec------cccccChhhcCCcccEEEEEEECCceEEEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHH
Confidence 999999999999999 899999999999 99999866 33456667775 488986 999
Q ss_pred hhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHH
Q psy2267 368 KAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIR 411 (462)
Q Consensus 368 DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~ 411 (462)
||||++|++++|+++|| |+|+.| +++.+++++.
T Consensus 381 Dal~~~r~~~~~~~ivp-----------GGGa~e~~~~~~L~~~~ 414 (515)
T 3iyg_G 381 DAMQVCRNVLLDPQLVP-----------GGGASEMAVAHALTEKS 414 (515)
T ss_pred HHHHHHHHHhhCCcEEe-----------CCCHHHHHHHHHHHHHh
Confidence 99999999999999999 999999 8888877654
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.4e-69 Score=575.97 Aligned_cols=355 Identities=21% Similarity=0.291 Sum_probs=298.9
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcccc
Q psy2267 24 DVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEE 103 (462)
Q Consensus 24 ~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~~ 103 (462)
+..+|.+++..|+.||+.|+++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||++
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp----~akll~~~a~~qd~e 79 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHP----TASLIAKVATAQDDI 79 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCH----HHHHHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999999999999999995 999999999999999
Q ss_pred cCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC-CHHHHHHHHHHHcCCC------ch
Q psy2267 104 AGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-TPEEIAQVATISANGD------KA 176 (462)
Q Consensus 104 ~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~-~~~~l~~va~~s~~~~------~~ 176 (462)
+||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.+||+||+++| +.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~ 159 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADV 159 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999988 8899999999999885 57
Q ss_pred hhhHHHHHHHHhccCc--------eEEEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccc---
Q psy2267 177 VGELISDAMKRVGKEG--------VITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK--- 245 (462)
Q Consensus 177 i~~li~~A~~~vg~~g--------~I~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~k--- 245 (462)
|+++++||+..+.+++ .|.+..|++..| |++++||+|+++|.||||++..+++++.+.|+++.....+
T Consensus 160 la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~d-s~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~ 238 (517)
T 3iyg_Z 160 LTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETD-TSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNS 238 (517)
T ss_pred HHHHHHHHhheeccCCCcCChhHheeeeecCCCccc-cceEeeEEEeccCCCCCccccccCCeEEEecccccccccccce
Confidence 8889999998886532 245578888875 9999999999999999987665555555555554432111
Q ss_pred ---cCCHHhHH-----------HHHHHHHhc--------CCCEEEE-ecCCchhHHHHHHhhhhccCceEEEEecCCCCC
Q psy2267 246 ---ISSIQSII-----------PALELANSK--------RKPLVIL-AEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGD 302 (462)
Q Consensus 246 ---i~s~~~i~-----------~~le~i~~~--------g~~lvIi-a~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~ 302 (462)
+++++++. ..++++... ++|+||+ +++|+++|+++|..+ +|++|+ +
T Consensus 239 ~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~------gI~~v~-----~ 307 (517)
T 3iyg_Z 239 GFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE------GIIALR-----R 307 (517)
T ss_pred eEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC------CCEEEE-----e
Confidence 34444432 234444333 4555555 699999999999854 478876 4
Q ss_pred CchhhHHHHHHHhCCeEeccCCCCCccCCCCCCC-CceeeEEEEee-CceEEEEecCC---CCeeEE-------------
Q psy2267 303 NRKATLQDLAVATGGIVFGDEASPVKLEDLQATD-LGSVGEIVITK-DDTLILKVTSA---PPCTCK------------- 364 (462)
Q Consensus 303 ~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~-LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~------------- 364 (462)
.++++|+|||++|||++++ +++++++++ ||+|+ |+... ++..++.|++| +.|||+
T Consensus 308 v~~~~leria~~tGa~iv~------~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~k 380 (517)
T 3iyg_Z 308 AKRRNMERLTLACGGIALN------SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIK 380 (517)
T ss_pred cCHHHHHHHHHHhCCEEec------chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchhheeeecCCcHHHHHHHH
Confidence 5689999999999999999 899999999 99999 95422 23345556675 478886
Q ss_pred -eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 365 -SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 365 -sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
++|||||++|++++|+++|| |+|+.| +++.+++++..
T Consensus 381 r~l~DAl~~~r~av~~~~iVp-----------GGGa~e~~~s~~L~~~~~ 419 (517)
T 3iyg_Z 381 DAIRDGLRAVKNAIDDGCVVP-----------GAGAVEVAMAEALVKYKP 419 (517)
T ss_pred HHHHHHHHHHHHHHhcceEec-----------CccHHHHHHHHHHHHHhc
Confidence 99999999999999999999 999999 88888887654
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=2e-69 Score=583.41 Aligned_cols=354 Identities=19% Similarity=0.242 Sum_probs=309.6
Q ss_pred hhccc-HHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhccc
Q psy2267 24 DVRFG-PEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNE 102 (462)
Q Consensus 24 ~~~~g-~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~ 102 (462)
+...| +++|..|+.||+.||++|||||||+||||||++++|+|+|||||+||||+|+++|| +|||++++|++||+
T Consensus 19 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP----~Akll~e~a~~qd~ 94 (568)
T 3p9d_H 19 NSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHP----AVKVLVMATEQQKI 94 (568)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCH----HHHHHHHHHHHHHT
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCH----HHHHHHHHHHhhhc
Confidence 45566 67999999999999999999999999999999999999999999999999999995 89999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCC----CCHHHHHHHHHHHcCCC----
Q psy2267 103 EAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPV----TTPEEIAQVATISANGD---- 174 (462)
Q Consensus 103 ~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v----~~~~~l~~va~~s~~~~---- 174 (462)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++++ +++++|.+||+||+++|
T Consensus 95 e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~ 174 (568)
T 3p9d_H 95 DMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGS 174 (568)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTC
T ss_pred eeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcch
Confidence 9999999999999999999999999999999999999999999999999999887 57889999999998764
Q ss_pred -chhhhHHHHHHHHhccC-----c-------eEEE--ecCCCcccceeEEEEEEEecccCCCCccCccc---cceeEeec
Q psy2267 175 -KAVGELISDAMKRVGKE-----G-------VITV--KDGKTLTDELEVIEGMKFDRGYISPYFINTAK---GAKVEFQD 236 (462)
Q Consensus 175 -~~i~~li~~A~~~vg~~-----g-------~I~v--~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~---~~kv~l~n 236 (462)
++||+|+++||.+++++ | .|++ ..|++++| |++++||+|+++|. +|++..+ ++++.+.+
T Consensus 175 ~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~d-S~lv~G~v~dk~~~--~m~~~i~~~~n~kIlll~ 251 (568)
T 3p9d_H 175 EDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSN-STVIKGMVFNREPE--GHVKSLSEDKKHKVAVFT 251 (568)
T ss_dssp HHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGG-CEEESSCCBSSCBS--SGGGSCCCCSSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcch-heeeccEEEeeccc--CCcEEEecCCcceEEEEc
Confidence 68999999999999874 3 3554 56999986 89999999999984 6776665 55555555
Q ss_pred eeEEecccc------cCCHHhHHH-----------HHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCC
Q psy2267 237 ALVLLSESK------ISSIQSIIP-----------ALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPG 299 (462)
Q Consensus 237 ~~Ili~d~k------i~s~~~i~~-----------~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~ 299 (462)
+++.+...+ +++++++.+ +++++.+.|+||||++++|+++|+++|..+ +|+||+.|+
T Consensus 252 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~ 325 (568)
T 3p9d_H 252 CPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS 325 (568)
T ss_dssp SCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC
T ss_pred cCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC
Confidence 554432222 678877754 788899999999999999999999999865 589998774
Q ss_pred CCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-CceEEEEecCC-----CCeeEE---------
Q psy2267 300 FGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDTLILKVTSA-----PPCTCK--------- 364 (462)
Q Consensus 300 ~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t~ii~~~~~-----~~~TI~--------- 364 (462)
+.+|+|||++|||++++ +++++++++||+|++|++.+ .+..++.|++| ..|||+
T Consensus 326 -----~~~leria~~tGa~ivs------~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l 394 (568)
T 3p9d_H 326 -----KFELRRLCRVCGATPLP------RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNL 394 (568)
T ss_dssp -----HHHHHHHHHHHSCCCCS------SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHH
T ss_pred -----HHHHHHHHHHhCCEEEe------ccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHH
Confidence 78999999999999999 79999999999999998765 34456667764 478986
Q ss_pred -----eechhhHHHHHhhh--cCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHH
Q psy2267 365 -----SCEKAPCITKNLIT--HYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 365 -----sl~DaL~vvk~~i~--d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~ 412 (462)
++|||||++|++++ |+++|| |+|+.| +++.+++++..
T Consensus 395 ~E~er~i~DAL~vvr~av~~~d~~iVp-----------GGGa~E~~ls~~L~~~a~ 439 (568)
T 3p9d_H 395 DDIERAIDDGVAAVKGLMKPSGGKLLP-----------GAGATEIELISRITKYGE 439 (568)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTCCCCCC-----------TTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCeEEe-----------CCcHHHHHHHHHHHHHhc
Confidence 99999999999999 999999 999999 88888887654
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=6.9e-69 Score=577.25 Aligned_cols=352 Identities=22% Similarity=0.276 Sum_probs=298.1
Q ss_pred hhhcccHHHHHHHHHHHHHHHHhhhccCCCCCCcEEEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhccc
Q psy2267 23 KDVRFGPEVRGLMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNE 102 (462)
Q Consensus 23 k~~~~g~~ar~~~i~gv~~la~~v~tTLGP~G~~k~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~ 102 (462)
.+..+|.+++..|+.||+.||++|+|||||+||||||++++|+|+|||||+||+|+|+++|| +|||++++|++||+
T Consensus 10 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP----~akll~e~a~~qd~ 85 (546)
T 3p9d_F 10 AESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSP----TAVLIARAAAAQDE 85 (546)
T ss_dssp EEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCH----HHHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCH----HHHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999995 89999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHHHHHHHHHHHHHHHhhcCCCCC----CHHHHHHHHHHHcCCC----
Q psy2267 103 EAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT----TPEEIAQVATISANGD---- 174 (462)
Q Consensus 103 ~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~G~~~a~~~~~~~L~~~s~~v~----~~~~l~~va~~s~~~~---- 174 (462)
++||||||+||||++||++|.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.+||+||+++|
T Consensus 86 e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~ 165 (546)
T 3p9d_F 86 ITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDAD 165 (546)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHH
T ss_pred HhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchh
Confidence 99999999999999999999999999999999999999999999999999999884 6889999999999975
Q ss_pred --chhhhHHHHHHHHhccC-c------eE--EEecCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecc
Q psy2267 175 --KAVGELISDAMKRVGKE-G------VI--TVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSE 243 (462)
Q Consensus 175 --~~i~~li~~A~~~vg~~-g------~I--~v~~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d 243 (462)
+.|+++++||+..+.+. + .| .+..|++..| |++++||+|+++|.||+|++..+++++.+.|+++....
T Consensus 166 ~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~d-s~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k 244 (546)
T 3p9d_F 166 LTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKD-TTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEK 244 (546)
T ss_dssp HCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTT-CCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCC
T ss_pred HHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccc-cEEEeeEEEecccccccCcceecCceEEEecCcccccc
Confidence 67899999999988631 1 23 4467888885 99999999999999999887766666666666655432
Q ss_pred cc------cCCHHhHH-----------HHHHHHHh---------cCCC-EEEEecCCchhHHHHHHhhhhccCceEEEEe
Q psy2267 244 SK------ISSIQSII-----------PALELANS---------KRKP-LVILAEDVDGEALSTLVVNRLKIGLQVAAVK 296 (462)
Q Consensus 244 ~k------i~s~~~i~-----------~~le~i~~---------~g~~-lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk 296 (462)
.+ +++++++. ..++.+.. .|+| |||++++|+++|+++|+.|+ |++|+
T Consensus 245 ~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr 318 (546)
T 3p9d_F 245 TEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALR 318 (546)
T ss_dssp CSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTT------CEEEC
T ss_pred cccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEe
Confidence 21 33333221 23444433 4566 55566799999999998763 57765
Q ss_pred cCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEE---EeeCceEEEEecCC---CCeeEE------
Q psy2267 297 APGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIV---ITKDDTLILKVTSA---PPCTCK------ 364 (462)
Q Consensus 297 ~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~---i~~~~t~ii~~~~~---~~~TI~------ 364 (462)
+.++++|+|||++|||++++ +++++++++||+|++|+ ++++++ +.|++| +.|||+
T Consensus 319 -----~v~~~~leria~~tGa~ii~------~l~~l~~~~LG~a~~v~~~~ig~~~~--~~i~g~~~~~~~tI~lrG~te 385 (546)
T 3p9d_F 319 -----RAKRRNMERLQLVTGGEAQN------SVEDLSPQILGFSGLVYQETIGEEKF--TYVTENTDPKSCTILIKGSTH 385 (546)
T ss_dssp -----CCCHHHHHHHHHTTTBCCCC------CCSSCSTTCCBCCCCBCBCCCSSCCC--EECSSCSCCSCEEEECCCSCH
T ss_pred -----cCCHHHHHHHHHHhCCEEec------chhhCCHhHCCcccEEEEEEecCceE--EEEecCCCCceEEEEECCCCH
Confidence 56789999999999999999 89999999999999995 454554 456775 589987
Q ss_pred --------eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHH
Q psy2267 365 --------SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQ 409 (462)
Q Consensus 365 --------sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~ 409 (462)
++|||||++|++++|+++|| |+|+.| +++.++++
T Consensus 386 ~~l~E~kr~l~DAl~~~r~av~~~~iVp-----------GGGa~e~~~s~~L~~ 428 (546)
T 3p9d_F 386 YALAQTKDAVRDGLRAVANVLKDKNIIP-----------GAGAFYIALSRYLRS 428 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCEEE-----------TTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcEEe-----------CCCHHHHHHHHHHHh
Confidence 99999999999999999999 999999 77777776
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=7.2e-63 Score=525.46 Aligned_cols=315 Identities=23% Similarity=0.347 Sum_probs=234.4
Q ss_pred EEecCCCCceEecChHHhhhccccCCccchhHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHhhhhhhcCCChHHHHH
Q psy2267 58 ILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRR 137 (462)
Q Consensus 58 ~I~~~~g~~~ITnDG~TIlk~i~l~~p~enp~akll~~~a~~q~~~~GDGTTT~vvLa~~Ll~~~~~li~~G~~P~~I~~ 137 (462)
||++++|+|+|||||+||+|+|+++|| +|||++++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP----~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHP----AAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCH----HHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 688999999999999999999999995 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCC--CHHHHHHHHHHHcCCC------chhhhHHHHHHHHhccC--ce--------EEEe--
Q psy2267 138 GVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVGKE--GV--------ITVK-- 197 (462)
Q Consensus 138 G~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~~s~~~~------~~i~~li~~A~~~vg~~--g~--------I~v~-- 197 (462)
||++|++.++++|+++++|++ +.++|.++|+||+++| +.|++++++|+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999999999987 4889999999997764 67999999999999876 52 5554
Q ss_pred cCCCcccceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccc-------------cCCHHhH-----------H
Q psy2267 198 DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK-------------ISSIQSI-----------I 253 (462)
Q Consensus 198 ~G~~~~des~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~k-------------i~s~~~i-----------~ 253 (462)
+|++++ +|++++||+|+++|.||||++. ++||+|++++.+ |++++++ .
T Consensus 157 ~G~~~~-ds~lv~G~v~dk~~~~~~m~~~-------i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSID-DSELIDGLVIDKERSHPNMPEK-------VENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGG-GCEEESEEEESCCCSSTTSCSE-------EEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCcc-ceEEEeeeEEeecCCCCCCccc-------ccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 899997 5999999999999999999765 456666665544 6777775 7
Q ss_pred HHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCC
Q psy2267 254 PALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQ 333 (462)
Q Consensus 254 ~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~ 333 (462)
++++++.+.|+||||++++|+++|+++|+.| +|+|| +++++++|+|||++|||++++ ++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~------~I~av-----~~~~k~~le~ia~~tGa~iis------~l~~~~ 291 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKA------GIYAV-----RRVKKSDLKRLSKVTGATIIQ------DLDQIT 291 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHT------TCEEE-----CSCCHHHHHHHHHHHCCCCBS------CTTCCC
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHC------CEEEE-----EeCCHHHHHHHHHHhCCeEec------ccccCC
Confidence 9999999999999999999999999999976 36886 588999999999999999999 899999
Q ss_pred CCCCceeeEEEEee-CceEEEEecCC---CCeeEE--------------eechhhHHHHHhhhcCeEeeeehhhhccCCC
Q psy2267 334 ATDLGSVGEIVITK-DDTLILKVTSA---PPCTCK--------------SCEKAPCITKNLITHYFIDIELLLISFDSPQ 395 (462)
Q Consensus 334 ~~~LG~a~~v~i~~-~~t~ii~~~~~---~~~TI~--------------sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~ 395 (462)
+++||+|++|++.+ ++..++.|++| +.|||+ ++|||||++|++++++++||
T Consensus 292 ~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVp----------- 360 (500)
T 3aq1_B 292 TEDVGTAGLVEEKEVRGGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVV----------- 360 (500)
T ss_dssp STTCEEEEEEEEEECSSSEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEE-----------
T ss_pred HhHCCCceEEEEEEecCeEEEEEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-----------
Confidence 99999999999864 22334445553 589987 99999999999999999999
Q ss_pred CCCCHH-HHHHHHHHHHH
Q psy2267 396 GKGKKE-DIDRRADQIRD 412 (462)
Q Consensus 396 g~g~~e-~i~~r~~~~~~ 412 (462)
|+|+.| +++.+++++..
T Consensus 361 GGGa~e~~~~~~L~~~~~ 378 (500)
T 3aq1_B 361 GGGSSEVELSLRLSEYAS 378 (500)
T ss_dssp TTTHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHhh
Confidence 999999 88888887653
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.6e-59 Score=430.31 Aligned_cols=194 Identities=48% Similarity=0.782 Sum_probs=190.9
Q ss_pred ceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccccCCHHhHHHHHHHHHhcCCCEEEEecCCchhHHHHHHhh
Q psy2267 205 ELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVN 284 (462)
Q Consensus 205 es~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ki~s~~~i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~N 284 (462)
++++++||.|||||+||||+|+.++|+++|+||+||++|+||+++++++|+||++.+.|+||+|+++||+++||++|+.|
T Consensus 1 elevvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvN 80 (194)
T 3m6c_A 1 ELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVN 80 (194)
T ss_dssp CCCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHH
T ss_pred CeEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhh
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEeeCceEEEEecCCCCeeEE
Q psy2267 285 RLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKVTSAPPCTCK 364 (462)
Q Consensus 285 k~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~~~t~ii~~~~~~~~TI~ 364 (462)
|+||+++|||||+||||++||++|+|||++|||++++++ .|++|++++.++||+|++|.+++++|+++.
T Consensus 81 klrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee-~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~---------- 149 (194)
T 3m6c_A 81 AIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPD-AGMVLREVGLEVLGSARRVVVSKDDTVIVD---------- 149 (194)
T ss_dssp HHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGG-GTCCGGGCCGGGCEEEEEEEECSSCEEEEE----------
T ss_pred hccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEecc-CCcccccCCHHHCCCccEEEEcCCceEEec----------
Confidence 999999999999999999999999999999999999988 899999999999999999999999999999
Q ss_pred eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEE
Q psy2267 365 SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVL 440 (462)
Q Consensus 365 sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e~i~~r~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~~a~~ 440 (462)
|+|++++|+.|++|++.||+.++|+||||||+||||||+||||||
T Consensus 150 -------------------------------G~g~~~~I~~Rv~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 150 -------------------------------GGGTAEAVANRAKHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp -------------------------------ECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred -------------------------------CCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999999999999999986
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=1.8e-57 Score=418.98 Aligned_cols=189 Identities=53% Similarity=0.837 Sum_probs=186.2
Q ss_pred EEEEEEecccCCCCccCccccceeEeeceeEEecccccCCHHhHHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhcc
Q psy2267 209 IEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKI 288 (462)
Q Consensus 209 v~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ki~s~~~i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~ 288 (462)
.+||.|||||+||||+|+.++|+++|+||+||++|+||+++++++|+||++.+.++||||+++||+++||++|+.||+||
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEeeCceEEEEecCCCCeeEEeech
Q psy2267 289 GLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKVTSAPPCTCKSCEK 368 (462)
Q Consensus 289 ~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~~~t~ii~~~~~~~~TI~sl~D 368 (462)
+++|||||+||||++||++|+|||++|||++|+++ .|++|++++.++||+|++|.|++++|+|+.
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee-~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~-------------- 156 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEE-IGLELEKATLEDLGQAKRVVINKDTTTIID-------------- 156 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGG-GTCCGGGCCGGGCEEEEEEEECSSCEEEEE--------------
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecc-cCCccccCCHhhCCCccEEEEcCCceEEec--------------
Confidence 99999999999999999999999999999999988 899999999999999999999999999999
Q ss_pred hhHHHHHhhhcCeEeeeehhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEE
Q psy2267 369 APCITKNLITHYFIDIELLLISFDSPQGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 439 (462)
Q Consensus 369 aL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e~i~~r~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~~a~ 439 (462)
|+|++++|+.|++||+.||+.++|+||||||+||||||+|||||
T Consensus 157 ---------------------------G~G~~~~I~~Rv~qIr~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 157 ---------------------------GVGEEGAIAARVTQIRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp ---------------------------ECCCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred ---------------------------CCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999999999999999999996
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=3e-42 Score=303.50 Aligned_cols=143 Identities=49% Similarity=0.810 Sum_probs=140.7
Q ss_pred EEEEecccCCCCccCccccceeEeeceeEEecccccCCHHhHHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCc
Q psy2267 211 GMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGL 290 (462)
Q Consensus 211 G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~ki~s~~~i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~ 290 (462)
||+|||||+||||+|+.++|+++++||+||++|+||+++++++|+||++.+.|+||+|+|+||+++||++|+.||+||++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEeeCceEEEE
Q psy2267 291 QVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILK 354 (462)
Q Consensus 291 ~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~~~t~ii~ 354 (462)
+|||||+||||++||++|+|||++|||++++++ .|++|++.+.++||+|++|.+++++|+++.
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee-~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~ 143 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEE-LGFKLENATLSMLGRAERVRITKDETTIVG 143 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTT-TTCCGGGCCGGGCEEEEEEEECSSCEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccc-cCCccccCCHhHCCccCEEEEcCCCeEEeC
Confidence 999999999999999999999999999999987 899999999999999999999999999985
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.83 E-value=1.9e-20 Score=173.37 Aligned_cols=143 Identities=20% Similarity=0.288 Sum_probs=117.2
Q ss_pred ceeEEEEEEEecccCCCCccCccccceeEeeceeEEecccc------cCCHHhH-----------HHHHHHHHhcCCCEE
Q psy2267 205 ELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK------ISSIQSI-----------IPALELANSKRKPLV 267 (462)
Q Consensus 205 es~lv~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~k------i~s~~~i-----------~~~le~i~~~g~~lv 267 (462)
+|++++|++|++++.+|.|++..+++++.+.|+++.....+ +++++++ ...++++.+.|+++|
T Consensus 3 dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVV 82 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVV 82 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEE
Confidence 49999999999999999999999999998888887764322 3444332 456888889999999
Q ss_pred EEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCce-eeEEEEe
Q psy2267 268 ILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGS-VGEIVIT 346 (462)
Q Consensus 268 Iia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~-a~~v~i~ 346 (462)
+++++|+|.|+++|..+ +|+|| +|+++++|+|||++|||++++ +++++++++||+ |+.|++.
T Consensus 83 l~~k~I~d~a~~~l~k~------gI~~v-----r~v~~~dleria~atGa~iv~------~~~~l~~~~LG~~~~~v~~~ 145 (178)
T 1gml_A 83 ITEKGISDLAQHYLMRA------NVTAI-----RRVRKTDNNRIARACGARIVS------RPEELREDDVGTGAGLLEIK 145 (178)
T ss_dssp EESSCBCHHHHHHHHHT------TCEEE-----CCCCHHHHHHHHHHHCCCEES------CGGGCCGGGSBCCEEEEEEE
T ss_pred EECCcccHHHHHHHHHC------CCEEE-----ecCCHHHHHHHHHHhCCeEeC------ChhhCChhhhCCcccEEEEE
Confidence 99999999999999754 47876 577899999999999999999 899999999999 9999965
Q ss_pred e-CceEEEEecCC---CCeeEE
Q psy2267 347 K-DDTLILKVTSA---PPCTCK 364 (462)
Q Consensus 347 ~-~~t~ii~~~~~---~~~TI~ 364 (462)
+ ++..++.|++| ++|||+
T Consensus 146 ~ig~~~~~~~~gc~~~~~~TIl 167 (178)
T 1gml_A 146 KIGDEYFTFITDCKDPKACTIL 167 (178)
T ss_dssp EETTEEEEEEEEESSTTSCEEE
T ss_pred EECCeEEEEEECCCCCCEEEEE
Confidence 4 56678888875 589986
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.79 E-value=7.1e-19 Score=159.94 Aligned_cols=134 Identities=22% Similarity=0.310 Sum_probs=112.7
Q ss_pred EEEEEEecccCCCCccCccccceeEeeceeEEecccc------cCCHHhH-----------HHHHHHHHhcCCCEEEEec
Q psy2267 209 IEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK------ISSIQSI-----------IPALELANSKRKPLVILAE 271 (462)
Q Consensus 209 v~G~~~d~g~~sp~~~~~~~~~kv~l~n~~Ili~d~k------i~s~~~i-----------~~~le~i~~~g~~lvIia~ 271 (462)
++|++|++++.+|.|++..+++++.+.|+++.....+ +++++++ ...++++.+.|+++||+++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 4799999999999999998888888888887763222 4555543 3568888899999999999
Q ss_pred CCchhHHHHHHhhhhccCceEEEEecCCCCCCchhhHHHHHHHhCCeEeccCCCCCccCCCCCCCCceeeEEEEee-Cce
Q psy2267 272 DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK-DDT 350 (462)
Q Consensus 272 ~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~rk~~LedIa~~TGa~vis~~~~~~~l~~~~~~~LG~a~~v~i~~-~~t 350 (462)
+|+|.|+++|..+ +|+|| +++++++|+|||++|||++++ +++++++++||+|+.|+..+ ++.
T Consensus 81 ~I~d~a~~~l~k~------gI~~v-----~~v~~~dleria~atGa~iv~------~~~~l~~~~LG~~~~v~e~~ig~~ 143 (159)
T 1ass_A 81 GIDDVAQHYLAKE------GIYAV-----RRVKKSDMEKLAKATGAKIVT------DLDDLTPSVLGEAETVEERKIGDD 143 (159)
T ss_dssp CBCHHHHHHHHHT------TCEEE-----CSCCHHHHHHHHHHHTCCCBS------STTSCCTTSCEEEEEEEEEEETTE
T ss_pred ccCHHHHHHHHHC------CCEEE-----ccCCHHHHHHHHHHhCCeeeC------ccccCCcccCccceEEEEEEECCe
Confidence 9999999999754 47886 577899999999999999999 89999999999999999755 566
Q ss_pred EEEEecCCC
Q psy2267 351 LILKVTSAP 359 (462)
Q Consensus 351 ~ii~~~~~~ 359 (462)
.++.|++|+
T Consensus 144 ~~~~~~g~~ 152 (159)
T 1ass_A 144 RMTFVMGCK 152 (159)
T ss_dssp EEEEEESCC
T ss_pred EEEEEECCC
Confidence 788888875
No 32
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=94.72 E-value=0.014 Score=62.80 Aligned_cols=38 Identities=16% Similarity=0.265 Sum_probs=34.3
Q ss_pred eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHHHH
Q psy2267 365 SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIRDQ 413 (462)
Q Consensus 365 sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~~~ 413 (462)
++|||||++|++++||++|| |+|+.| +++.++.++...
T Consensus 451 ~i~DAl~a~r~av~~~~iVp-----------GGGa~e~~~s~~L~~~~~~ 489 (590)
T 3p9d_C 451 NLQDAMAVARNVMLSPSLSP-----------GGGATEMAVSVKLAEKAKQ 489 (590)
T ss_dssp HHHHHHHHHHHHHHCCCEEC-----------TTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEe-----------CccHHHHHHHHHHHHHhhc
Confidence 99999999999999999999 999999 888888876443
No 33
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=93.74 E-value=0.035 Score=59.26 Aligned_cols=35 Identities=17% Similarity=0.089 Sum_probs=32.2
Q ss_pred eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHHH
Q psy2267 365 SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQIR 411 (462)
Q Consensus 365 sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~~ 411 (462)
++|||||++|++++++ +|| |+|+.| +++.+++++.
T Consensus 393 ~i~DAl~~~r~av~~g-iVp-----------GGGa~e~~~s~~L~~~~ 428 (543)
T 1we3_A 393 RFEDALNATRAAVEEG-IVP-----------GGGVTLLRAISAVEELI 428 (543)
T ss_dssp HHHHHHHHHHHHHHHC-EEE-----------TTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccC-cCC-----------CccHHHHHHHHHHHHHh
Confidence 9999999999999999 999 999999 8888887764
No 34
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=91.34 E-value=0.052 Score=57.98 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=30.1
Q ss_pred eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHH
Q psy2267 365 SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQI 410 (462)
Q Consensus 365 sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~ 410 (462)
++|||||++|++++++ +|| |+|+.| +++.+++++
T Consensus 394 ~i~DAl~~~r~av~~g-iVp-----------GGGa~e~~~s~~L~~~ 428 (547)
T 1kp8_A 394 RVEDALHATRAAVEEG-VVA-----------GGGVALIRVASKLADL 428 (547)
T ss_dssp HHHHHHHHHHHHHHHC-EEE-----------TTTHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHhccCC-EEe-----------CCcHHHHHHHHHHHHH
Confidence 9999999999999999 999 999988 777776654
No 35
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=91.23 E-value=0.038 Score=58.95 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=29.0
Q ss_pred eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHHHHHHH
Q psy2267 365 SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDRRADQI 410 (462)
Q Consensus 365 sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~r~~~~ 410 (462)
++|||||++|++++++ +|| |+|+.| +++.+++++
T Consensus 395 ~i~DAl~~~r~av~~g-iVp-----------GGGa~e~~~s~~L~~~ 429 (545)
T 1iok_A 395 RVDDALNATRAAVQEG-IVV-----------GGGVALVQGAKVLEGL 429 (545)
T ss_dssp HHHHHHHHHHHHHHHC-EEE-----------TTTHHHHHHGGGGGSC
T ss_pred HHHHHHHHHHHHhhcC-CCC-----------CchHHHHHHHHHHHHH
Confidence 9999999999999999 999 999888 666665543
No 36
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=89.30 E-value=0.049 Score=58.11 Aligned_cols=29 Identities=21% Similarity=0.083 Sum_probs=24.3
Q ss_pred eechhhHHHHHhhhcCeEeeeehhhhccCCCCCCCHH-HHHH
Q psy2267 365 SCEKAPCITKNLITHYFIDIELLLISFDSPQGKGKKE-DIDR 405 (462)
Q Consensus 365 sl~DaL~vvk~~i~d~~vv~~~~~~~~~~~~g~g~~e-~i~~ 405 (462)
++|||||++|++++++ +|| |+|+.| +++.
T Consensus 393 ~l~DAl~a~r~av~~g-iVp-----------GGGa~e~~~s~ 422 (546)
T 3rtk_A 393 RIEDAVRNAKAAVEEG-IVA-----------GGGVTLLQAAP 422 (546)
T ss_dssp HHHHHHHHHHHHHHHC-EEE-----------TTTHHHHTTGG
T ss_pred HHHHHHHHHHHHHhCC-ccc-----------CCcHHHHHHHH
Confidence 9999999999999998 999 777666 4433
No 37
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=83.35 E-value=0.04 Score=58.52 Aligned_cols=60 Identities=13% Similarity=0.236 Sum_probs=47.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhcCChHHHHHH------------HHHHHhhcC----CeEEEEeccccccccccccc
Q psy2267 396 GKGKKEDIDRRADQIRDQIEATTSDYEREKL------------QERLARLAS----GVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 396 g~g~~e~i~~r~~~~~~~~~~~~~~~~~~~l------------~~r~~~l~~----~~a~~~vg~~~~~~~~~~~~ 455 (462)
....+..+.........++-.+.++++.++| .+|+..+.| |+|+|.+||+||.+++|++.
T Consensus 307 ~~~~~~dle~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr 382 (527)
T 3p9d_B 307 EHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAER 382 (527)
T ss_dssp CCCHHHHHHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHT
T ss_pred ecCCHHHHHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHH
Confidence 4455667777766666666666667777777 688999998 99999999999999999886
No 38
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=45.53 E-value=5.5 Score=41.85 Aligned_cols=23 Identities=9% Similarity=0.163 Sum_probs=20.9
Q ss_pred hcCCeEEEEeccccccccccccc
Q psy2267 433 LASGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 433 l~~~~a~~~vg~~~~~~~~~~~~ 455 (462)
++|++|+|.+||+||.+++|++.
T Consensus 352 ~~~~~~tI~lrG~te~~l~E~kr 374 (512)
T 3iyg_Q 352 EDGAISTIVLRGSTDNLMDDIER 374 (512)
T ss_pred CCCceEEEEECCCcHHHHHHHHH
Confidence 37999999999999999999875
No 39
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=27.91 E-value=8.1 Score=40.56 Aligned_cols=28 Identities=11% Similarity=0.296 Sum_probs=24.2
Q ss_pred HHHHhhcC----CeEEEEeccccccccccccc
Q psy2267 428 ERLARLAS----GVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 428 ~r~~~l~~----~~a~~~vg~~~~~~~~~~~~ 455 (462)
+|+..+.| ++++|.+||+||.+++|++.
T Consensus 344 ~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr 375 (513)
T 3iyg_B 344 DKLIHFSGVALGEACTIVLRGATQQILDEAER 375 (513)
T ss_pred eEEEEEecCCCCceEEEEecCCCHHHHHHHHH
Confidence 66777774 69999999999999999876
No 40
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=27.61 E-value=75 Score=26.28 Aligned_cols=73 Identities=14% Similarity=0.164 Sum_probs=47.0
Q ss_pred CCHHhHHHHHHHHHhcCCCEEEEecCCchhHHHHHHhhhhccCceEEEEecCCCCCCc----hhhHHHHHHHhCCeEec
Q psy2267 247 SSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNR----KATLQDLAVATGGIVFG 321 (462)
Q Consensus 247 ~s~~~i~~~le~i~~~g~~lvIia~~I~~~aL~~L~~Nk~~~~~~v~aVk~p~~g~~r----k~~LedIa~~TGa~vis 321 (462)
++.+++...++++.+.+.-++++.+++.+..-+.+- +++....=+.|-+|+..... ....+++.++.|..++-
T Consensus 28 ~~~ee~~~~~~~l~~~digIIlIte~ia~~i~~~i~--~~~~~~~P~IveIPs~~g~~~~~~~~i~~~V~~aiG~di~~ 104 (115)
T 3aon_B 28 TTKTEIRKTIDEMAKNEYGVIYITEQCANLVPETIE--RYKGQLTPAIILIPSHQGTLGIGLEEIQNSVEKAVGQNILS 104 (115)
T ss_dssp CSHHHHHHHHHHHHHTTEEEEEEEHHHHTTCHHHHH--HHHTSSSCEEEEECBTTBCCSHHHHHHHHHHHHHTTCC---
T ss_pred CCHHHHHHHHHHHHhcCceEEEEeHHHHHHhHHHHH--HHhCCCCCEEEEECCCCCCCCccHHHHHHHHHHHhCcceEe
Confidence 567888888888776577889998877777666553 23333223445678854332 25677788899998875
No 41
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=26.48 E-value=18 Score=37.97 Aligned_cols=22 Identities=18% Similarity=0.264 Sum_probs=20.5
Q ss_pred cCCeEEEEeccccccccccccc
Q psy2267 434 ASGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 434 ~~~~a~~~vg~~~~~~~~~~~~ 455 (462)
+|++++|.+||+||.+++|++.
T Consensus 361 ~~~~~tI~lrG~te~~l~E~kr 382 (518)
T 3iyg_D 361 PGKTVTIVVRGSNKLVIEEAER 382 (518)
T ss_pred CCceEEEEECCCCHHHHHHHHH
Confidence 5999999999999999999876
No 42
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=24.59 E-value=44 Score=27.24 Aligned_cols=18 Identities=28% Similarity=0.322 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHhhcCCeE
Q psy2267 421 YEREKLQERLARLASGVA 438 (462)
Q Consensus 421 ~~~~~l~~r~~~l~~~~a 438 (462)
.+-++|++|+.+|..|-+
T Consensus 82 ~E~erLr~~v~~lEeg~~ 99 (100)
T 1go4_E 82 AECERLRGLLRAMERGGT 99 (100)
T ss_dssp HHHHHHHHHHTTCC----
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 345899999999998754
No 43
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=21.78 E-value=21 Score=37.49 Aligned_cols=21 Identities=5% Similarity=0.162 Sum_probs=19.9
Q ss_pred CCeEEEEeccccccccccccc
Q psy2267 435 SGVAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 435 ~~~a~~~vg~~~~~~~~~~~~ 455 (462)
|++++|.+||+||.+++|++.
T Consensus 372 ~~~~tI~lrG~te~~l~E~kr 392 (528)
T 3p9d_D 372 RPTVSVVIRGANNMIIDETER 392 (528)
T ss_dssp CCCCEEECCCSSTTHHHHHHH
T ss_pred CceEEEEEcCCCHHHHHHHHH
Confidence 899999999999999999876
No 44
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=21.20 E-value=5.8 Score=42.10 Aligned_cols=29 Identities=17% Similarity=0.178 Sum_probs=26.2
Q ss_pred HHHHHhhcCC----eEEEEeccccccccccccc
Q psy2267 427 QERLARLASG----VAVLKVGGSSEVSLEYPVN 455 (462)
Q Consensus 427 ~~r~~~l~~~----~a~~~vg~~~~~~~~~~~~ 455 (462)
++|+..++|+ +++|.+||+||.+++|++.
T Consensus 359 ~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr 391 (550)
T 3p9d_G 359 SERYNLFQGCPQAKTCTLLLRGGAEQVIAEVER 391 (550)
T ss_dssp SSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHH
T ss_pred CeEEEEEecCCCCceeEEEEeCCcHHHHHHHHH
Confidence 5799999985 9999999999999999875
No 45
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str}
Probab=20.69 E-value=99 Score=26.26 Aligned_cols=35 Identities=20% Similarity=0.216 Sum_probs=30.0
Q ss_pred ccHHHHHHHHHHHHHHHHhhhcc-CCCCCCcEEEec
Q psy2267 27 FGPEVRGLMLQGVDILADAVAVT-MGPKGRNVILEQ 61 (462)
Q Consensus 27 ~g~~ar~~~i~gv~~la~~v~tT-LGP~G~~k~I~~ 61 (462)
...+.+..+...+..++.+++.. |+|.|.|.++-+
T Consensus 56 l~~~~~~~l~~~~~~v~~~l~~~~~~~~~~ni~~n~ 91 (149)
T 3o0m_A 56 TPPETVAGMAAVGQRIARAARESGLHADGNNIAIND 91 (149)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHSTTCCSEEEEECCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCCceEEEEec
Confidence 45778899999999999999998 999999977643
Done!