Query psy2268
Match_columns 261
No_of_seqs 250 out of 2157
Neff 8.0
Searched_HMMs 46136
Date Fri Aug 16 20:21:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2268.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2268hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 1.6E-62 3.5E-67 439.9 23.7 230 1-260 2-290 (371)
2 PRK14288 chaperone protein Dna 100.0 1.1E-55 2.4E-60 404.1 23.7 229 1-260 1-284 (369)
3 PRK14296 chaperone protein Dna 100.0 3.3E-54 7.1E-59 394.6 25.6 235 3-260 4-300 (372)
4 PRK14285 chaperone protein Dna 100.0 4.5E-53 9.7E-58 386.5 24.9 231 1-260 1-292 (365)
5 PRK14286 chaperone protein Dna 100.0 5.7E-53 1.2E-57 386.6 25.3 235 2-260 3-296 (372)
6 PRK14278 chaperone protein Dna 100.0 1.1E-52 2.4E-57 385.5 25.7 227 1-258 1-287 (378)
7 PRK14279 chaperone protein Dna 100.0 8.8E-53 1.9E-57 387.6 25.1 245 1-260 7-319 (392)
8 PRK14284 chaperone protein Dna 100.0 1.7E-52 3.7E-57 386.0 26.1 245 3-259 1-303 (391)
9 PTZ00037 DnaJ_C chaperone prot 100.0 4.6E-53 1E-57 391.0 22.3 214 2-260 27-300 (421)
10 PRK14276 chaperone protein Dna 100.0 1.3E-52 2.8E-57 385.4 24.9 231 2-260 3-296 (380)
11 PRK14280 chaperone protein Dna 100.0 2.4E-52 5.2E-57 383.2 25.5 228 3-260 4-293 (376)
12 PRK14298 chaperone protein Dna 100.0 2.3E-52 4.9E-57 383.1 24.8 228 2-260 4-291 (377)
13 PRK14287 chaperone protein Dna 100.0 4.7E-52 1E-56 380.5 25.7 226 2-260 3-288 (371)
14 PRK14291 chaperone protein Dna 100.0 4E-52 8.8E-57 382.4 24.9 244 1-260 1-301 (382)
15 PRK14295 chaperone protein Dna 100.0 6.7E-52 1.4E-56 381.4 26.0 239 1-260 7-312 (389)
16 PRK14297 chaperone protein Dna 100.0 7.5E-52 1.6E-56 380.6 25.7 233 2-260 3-298 (380)
17 PRK14294 chaperone protein Dna 100.0 1.1E-51 2.3E-56 377.9 24.0 229 3-260 4-290 (366)
18 PRK14277 chaperone protein Dna 100.0 1.7E-51 3.7E-56 378.7 24.8 234 2-260 4-305 (386)
19 PRK14301 chaperone protein Dna 100.0 2.2E-51 4.7E-56 376.4 23.2 231 2-260 3-290 (373)
20 PRK14281 chaperone protein Dna 100.0 4.3E-51 9.3E-56 377.1 24.8 248 1-260 1-312 (397)
21 PRK14282 chaperone protein Dna 100.0 8.3E-51 1.8E-55 372.4 25.9 235 2-260 3-302 (369)
22 PRK14299 chaperone protein Dna 100.0 1.2E-50 2.6E-55 360.4 24.1 220 2-260 3-227 (291)
23 PRK14290 chaperone protein Dna 100.0 4.5E-50 9.7E-55 367.0 25.4 235 1-259 1-295 (365)
24 PRK10767 chaperone protein Dna 100.0 3.7E-50 8.1E-55 368.6 24.8 229 2-260 3-288 (371)
25 PRK14300 chaperone protein Dna 100.0 3.2E-50 7E-55 368.7 24.4 233 1-259 1-290 (372)
26 TIGR02349 DnaJ_bact chaperone 100.0 5.4E-50 1.2E-54 365.7 24.0 230 4-259 1-292 (354)
27 PRK14283 chaperone protein Dna 100.0 4.6E-49 1E-53 361.9 24.7 232 2-259 4-295 (378)
28 PRK14292 chaperone protein Dna 100.0 4.3E-49 9.4E-54 361.5 23.4 229 2-260 1-288 (371)
29 PRK10266 curved DNA-binding pr 100.0 2E-48 4.2E-53 348.6 24.8 225 3-260 4-235 (306)
30 PRK14289 chaperone protein Dna 100.0 8.2E-48 1.8E-52 354.7 24.4 240 2-260 4-304 (386)
31 PRK14293 chaperone protein Dna 100.0 7.3E-48 1.6E-52 353.5 21.4 233 1-260 1-293 (374)
32 KOG0712|consensus 100.0 4.3E-47 9.4E-52 336.1 16.4 215 2-260 3-278 (337)
33 KOG0713|consensus 100.0 4.5E-39 9.9E-44 281.9 9.5 226 2-258 15-275 (336)
34 TIGR03835 termin_org_DnaJ term 100.0 9.8E-36 2.1E-40 283.3 22.7 114 143-260 656-772 (871)
35 KOG0715|consensus 100.0 3.6E-32 7.8E-37 240.4 13.1 192 4-246 44-288 (288)
36 KOG0714|consensus 99.9 6.7E-26 1.4E-30 200.4 15.5 250 1-259 1-277 (306)
37 COG2214 CbpA DnaJ-class molecu 99.9 1.4E-20 3E-25 159.4 15.6 217 1-244 4-232 (237)
38 KOG0716|consensus 99.8 1.3E-21 2.9E-26 167.0 5.5 72 2-73 30-102 (279)
39 KOG0717|consensus 99.8 2.6E-21 5.6E-26 175.3 5.6 75 1-75 6-82 (508)
40 KOG0718|consensus 99.8 2.9E-21 6.2E-26 175.1 5.9 71 3-73 9-83 (546)
41 PTZ00341 Ring-infected erythro 99.8 6.4E-21 1.4E-25 186.2 6.2 73 2-74 572-644 (1136)
42 KOG0691|consensus 99.8 2.9E-20 6.3E-25 163.7 6.3 72 2-73 4-76 (296)
43 PF00226 DnaJ: DnaJ domain; I 99.8 1.7E-19 3.7E-24 124.8 5.3 62 4-65 1-64 (64)
44 KOG0624|consensus 99.8 3.6E-19 7.7E-24 157.2 7.8 72 2-74 393-468 (504)
45 KOG0719|consensus 99.8 2.2E-19 4.8E-24 150.1 6.0 70 1-70 12-84 (264)
46 PHA03102 Small T antigen; Revi 99.7 3.1E-18 6.6E-23 137.4 5.6 83 4-102 6-90 (153)
47 smart00271 DnaJ DnaJ molecular 99.7 1.8E-17 3.8E-22 113.1 5.9 57 3-59 1-59 (60)
48 KOG0721|consensus 99.7 3.1E-17 6.7E-22 136.1 6.5 69 2-70 98-167 (230)
49 cd06257 DnaJ DnaJ domain or J- 99.7 5.1E-17 1.1E-21 108.7 6.2 54 4-57 1-55 (55)
50 PRK01356 hscB co-chaperone Hsc 99.6 3.9E-15 8.4E-20 121.9 6.9 65 2-66 1-71 (166)
51 KOG0722|consensus 99.6 1E-15 2.2E-20 129.7 3.2 65 3-67 33-97 (329)
52 KOG0550|consensus 99.5 5.4E-15 1.2E-19 133.3 5.8 64 3-66 373-438 (486)
53 PRK05014 hscB co-chaperone Hsc 99.5 1E-14 2.2E-19 120.1 6.8 64 3-66 1-72 (171)
54 KOG0720|consensus 99.5 2.2E-14 4.8E-19 130.6 5.4 66 2-67 234-299 (490)
55 PRK03578 hscB co-chaperone Hsc 99.5 5.5E-14 1.2E-18 116.1 6.7 65 2-66 5-77 (176)
56 PRK00294 hscB co-chaperone Hsc 99.5 7.6E-14 1.7E-18 114.8 7.3 65 2-66 3-75 (173)
57 PTZ00100 DnaJ chaperone protei 99.4 2.2E-13 4.8E-18 104.0 5.0 51 3-56 65-115 (116)
58 PRK09430 djlA Dna-J like membr 99.4 4.9E-13 1.1E-17 117.6 5.4 56 3-58 200-263 (267)
59 PRK14282 chaperone protein Dna 99.4 8.8E-13 1.9E-17 121.3 6.7 89 137-240 269-360 (369)
60 PHA02624 large T antigen; Prov 99.3 1.3E-12 2.9E-17 124.4 4.9 60 3-65 11-72 (647)
61 PRK14294 chaperone protein Dna 99.3 3.2E-12 6.9E-17 117.5 6.6 88 137-240 257-347 (366)
62 PRK14290 chaperone protein Dna 99.3 3.1E-12 6.8E-17 117.5 6.4 88 137-240 263-353 (365)
63 PF01556 CTDII: DnaJ C termina 99.3 6.1E-12 1.3E-16 91.1 6.1 71 145-230 1-75 (81)
64 COG5407 SEC63 Preprotein trans 99.3 3.1E-12 6.8E-17 116.3 5.1 70 2-71 97-172 (610)
65 PRK14285 chaperone protein Dna 99.3 5.1E-12 1.1E-16 116.0 6.1 88 137-239 259-349 (365)
66 PRK14298 chaperone protein Dna 99.3 6E-12 1.3E-16 116.0 5.9 88 137-240 258-348 (377)
67 PRK10767 chaperone protein Dna 99.3 6.4E-12 1.4E-16 115.7 6.1 88 137-240 255-345 (371)
68 PRK14299 chaperone protein Dna 99.3 6.3E-12 1.4E-16 112.1 5.8 87 136-238 193-281 (291)
69 PRK14284 chaperone protein Dna 99.2 1.4E-11 3E-16 114.2 6.7 89 137-239 271-362 (391)
70 PRK14287 chaperone protein Dna 99.2 1.4E-11 3.1E-16 113.3 6.0 87 137-239 255-344 (371)
71 PRK14301 chaperone protein Dna 99.2 2.4E-11 5.1E-16 112.0 6.5 85 138-238 258-345 (373)
72 PRK14288 chaperone protein Dna 99.2 2.2E-11 4.7E-16 112.0 6.2 85 137-236 251-338 (369)
73 PRK14300 chaperone protein Dna 99.2 7.8E-11 1.7E-15 108.5 9.2 86 137-237 258-346 (372)
74 TIGR02349 DnaJ_bact chaperone 99.2 3.1E-11 6.6E-16 110.6 6.4 85 137-237 260-347 (354)
75 PRK10266 curved DNA-binding pr 99.2 9.3E-11 2E-15 105.3 8.9 80 137-232 202-282 (306)
76 COG0484 DnaJ DnaJ-class molecu 99.2 2.8E-11 6.1E-16 109.6 5.4 86 137-238 257-345 (371)
77 PRK14279 chaperone protein Dna 99.2 1.3E-10 2.9E-15 107.6 9.4 83 137-235 286-370 (392)
78 PRK01773 hscB co-chaperone Hsc 99.2 8E-11 1.7E-15 96.9 7.0 65 2-66 1-73 (173)
79 PRK14286 chaperone protein Dna 99.1 5.2E-11 1.1E-15 109.7 6.3 86 137-237 263-351 (372)
80 PRK14295 chaperone protein Dna 99.1 1.9E-10 4.2E-15 106.4 9.3 83 137-234 279-363 (389)
81 PRK14276 chaperone protein Dna 99.1 1.9E-10 4.1E-15 106.3 9.1 82 137-234 263-347 (380)
82 PRK14291 chaperone protein Dna 99.1 2.3E-10 5.1E-15 105.7 9.7 76 137-227 268-346 (382)
83 PRK14280 chaperone protein Dna 99.1 7.8E-11 1.7E-15 108.7 6.3 82 137-234 260-344 (376)
84 PRK14293 chaperone protein Dna 99.1 6E-11 1.3E-15 109.4 5.2 87 138-240 261-351 (374)
85 PRK14281 chaperone protein Dna 99.1 2.5E-10 5.5E-15 106.0 9.1 83 137-235 279-364 (397)
86 KOG1150|consensus 99.1 1.2E-10 2.6E-15 95.8 5.3 63 2-64 52-116 (250)
87 PRK14297 chaperone protein Dna 99.1 3.6E-10 7.8E-15 104.4 8.9 82 137-234 265-349 (380)
88 PRK14278 chaperone protein Dna 99.1 1.4E-10 3.1E-15 107.0 6.1 85 137-236 256-343 (378)
89 PRK14292 chaperone protein Dna 99.1 1.3E-10 2.8E-15 107.1 5.4 85 137-237 255-342 (371)
90 TIGR00714 hscB Fe-S protein as 99.1 2.1E-10 4.6E-15 93.2 6.1 53 15-67 3-61 (157)
91 PRK14277 chaperone protein Dna 99.1 1.8E-10 3.8E-15 106.7 6.1 84 137-236 272-358 (386)
92 PRK14296 chaperone protein Dna 99.0 2.4E-10 5.2E-15 105.3 5.9 83 137-235 266-353 (372)
93 PRK14283 chaperone protein Dna 99.0 3.8E-10 8.1E-15 104.2 6.3 83 137-235 263-348 (378)
94 PTZ00037 DnaJ_C chaperone prot 99.0 1E-09 2.2E-14 102.3 8.8 82 137-233 267-356 (421)
95 PRK14289 chaperone protein Dna 99.0 6.1E-10 1.3E-14 103.1 5.8 79 138-232 272-353 (386)
96 COG5269 ZUO1 Ribosome-associat 99.0 4.8E-10 1E-14 96.3 3.8 67 3-69 43-115 (379)
97 TIGR03835 termin_org_DnaJ term 98.9 3.3E-09 7.1E-14 102.9 8.5 69 3-71 2-70 (871)
98 KOG0568|consensus 98.5 1.7E-07 3.8E-12 79.0 4.4 55 4-58 48-103 (342)
99 KOG1789|consensus 98.4 3.4E-07 7.3E-12 91.1 5.3 52 4-57 1282-1337(2235)
100 KOG0723|consensus 98.2 2.4E-06 5.1E-11 63.6 5.1 49 7-58 60-108 (112)
101 KOG0712|consensus 97.6 0.00017 3.7E-09 65.0 7.2 77 136-227 244-324 (337)
102 KOG3192|consensus 97.2 0.00036 7.8E-09 55.7 3.9 64 3-66 8-79 (168)
103 PF01556 CTDII: DnaJ C termina 97.1 0.00026 5.6E-09 51.0 1.7 26 235-260 1-26 (81)
104 COG1076 DjlA DnaJ-domain-conta 95.9 0.0065 1.4E-07 50.2 3.1 63 4-66 2-72 (174)
105 KOG0431|consensus 95.1 0.027 5.9E-07 53.4 4.5 43 11-53 396-446 (453)
106 COG1076 DjlA DnaJ-domain-conta 93.3 0.043 9.2E-07 45.3 1.5 35 3-37 113-147 (174)
107 PF03656 Pam16: Pam16; InterP 93.1 0.21 4.6E-06 39.0 5.0 51 6-59 61-111 (127)
108 PF13446 RPT: A repeated domai 86.8 1.7 3.6E-05 29.3 4.6 25 5-29 7-31 (62)
109 KOG0724|consensus 86.3 0.75 1.6E-05 41.8 3.5 53 14-66 3-60 (335)
110 PF11833 DUF3353: Protein of u 84.8 1.8 4E-05 36.3 4.9 38 12-56 1-38 (194)
111 COG5552 Uncharacterized conser 83.4 4.5 9.7E-05 28.4 5.4 46 1-46 1-46 (88)
112 PF10041 DUF2277: Uncharacteri 73.2 19 0.00041 25.4 6.1 46 1-46 1-46 (78)
113 PF14687 DUF4460: Domain of un 65.3 14 0.00031 28.1 4.7 44 13-56 4-52 (112)
114 PF07709 SRR: Seven Residue Re 58.3 6.1 0.00013 18.4 1.0 13 44-56 2-14 (14)
115 smart00276 GLECT Galectin. Gal 55.2 17 0.00037 28.0 3.6 38 189-226 2-48 (128)
116 PF09285 Elong-fact-P_C: Elong 46.1 32 0.0007 22.8 3.2 20 188-207 30-49 (56)
117 PF07739 TipAS: TipAS antibiot 44.6 47 0.001 24.6 4.6 52 10-69 51-104 (118)
118 smart00841 Elong-fact-P_C Elon 43.7 32 0.00069 22.8 3.0 20 188-207 30-49 (56)
119 PF12434 Malate_DH: Malate deh 42.9 36 0.00077 19.1 2.5 17 17-33 10-26 (28)
120 PF04620 FlaA: Flagellar filam 41.2 1.5E+02 0.0033 25.3 7.5 42 186-227 148-190 (217)
121 PF01846 FF: FF domain; Inter 41.0 67 0.0015 20.1 4.2 46 19-67 1-51 (51)
122 cd05794 S1_EF-P_repeat_2 S1_EF 39.2 40 0.00088 22.3 2.9 20 188-207 30-49 (56)
123 cd00084 HMG-box High Mobility 36.9 1.2E+02 0.0025 19.6 5.2 43 21-67 12-54 (66)
124 cd00070 GLECT Galectin/galacto 36.7 58 0.0012 24.9 4.0 39 189-227 3-50 (127)
125 KOG0713|consensus 35.2 3.8 8.2E-05 37.1 -3.3 80 138-232 245-328 (336)
126 smart00441 FF Contains two con 32.8 1.2E+02 0.0027 19.1 4.6 48 19-67 2-52 (55)
127 PF14706 Tnp_DNA_bind: Transpo 32.4 46 0.001 22.2 2.4 41 18-59 15-57 (58)
128 cd01388 SOX-TCF_HMG-box SOX-TC 31.2 1.6E+02 0.0034 19.9 5.1 42 22-67 14-55 (72)
129 cd01389 MATA_HMG-box MATA_HMG- 28.9 1.8E+02 0.0039 19.9 5.2 43 21-67 13-55 (77)
130 cd01390 HMGB-UBF_HMG-box HMGB- 27.9 1.7E+02 0.0038 18.9 5.0 41 24-68 15-55 (66)
131 KOG0527|consensus 27.4 75 0.0016 29.0 3.6 41 22-66 75-115 (331)
132 PF00505 HMG_box: HMG (high mo 25.8 1.9E+02 0.0041 18.9 4.7 42 22-67 13-54 (69)
133 TIGR02642 phage_xxxx uncharact 25.5 76 0.0017 26.5 3.1 25 180-205 125-149 (186)
134 PF00337 Gal-bind_lectin: Gala 25.2 75 0.0016 24.3 2.9 39 189-227 3-54 (133)
135 PRK12426 elongation factor P; 24.6 1.2E+02 0.0025 25.3 4.0 20 188-207 158-177 (185)
136 COG0089 RplW Ribosomal protein 23.7 63 0.0014 23.8 2.0 20 8-27 25-44 (94)
137 PF04246 RseC_MucC: Positive r 22.7 1E+02 0.0022 23.8 3.2 24 183-206 39-62 (135)
138 KOG3442|consensus 22.6 1.1E+02 0.0023 23.9 3.1 32 7-38 63-94 (132)
139 PRK14578 elongation factor P; 22.4 1.5E+02 0.0032 24.8 4.2 20 188-207 160-179 (187)
140 cd06463 p23_like Proteins cont 22.3 2.2E+02 0.0049 18.9 4.7 18 187-204 9-26 (84)
141 PRK13263 ureE urease accessory 22.0 5E+02 0.011 22.1 7.8 63 147-234 22-86 (206)
142 TIGR01563 gp16_SPP1 phage head 21.7 2.4E+02 0.0053 19.9 4.9 45 185-239 55-99 (101)
143 cd08545 YcnI_like Reeler-like 21.1 1.6E+02 0.0034 23.8 4.0 50 150-206 5-61 (152)
144 cd01780 PLC_epsilon_RA Ubiquit 20.4 1.1E+02 0.0024 22.5 2.6 35 3-37 11-45 (93)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-62 Score=439.91 Aligned_cols=230 Identities=27% Similarity=0.429 Sum_probs=189.8
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN-DVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTP 79 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~-~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~ 79 (261)
|.+|||+||||+++||.+||||||||||++||||+|+ +++|+++|++|++||||||||+||++||+||++++++++.++
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg~gg 81 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGGFGG 81 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCCcCC
Confidence 6789999999999999999999999999999999999 799999999999999999999999999999999987433222
Q ss_pred CCCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhc
Q psy2268 80 LGYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYR 159 (261)
Q Consensus 80 ~~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~ 159 (261)
++ .++ |.+++.+||++|||+.. + +.+++..++++.| +.+.|+|||+||+.
T Consensus 82 ~g-~~~--fgg~~~DIF~~~FgGg~-------------------~-~~~~~~~~~rG~D-------l~~~l~isleEa~~ 131 (371)
T COG0484 82 FG-FGG--FGGDFGDIFEDFFGGGG-------------------G-GRRRPNRPRRGAD-------LRYNLEITLEEAVF 131 (371)
T ss_pred CC-cCC--CCCCHHHHHHHhhcCCC-------------------c-ccCCCCCcccCCc-------eEEEEEeEhhhhcc
Confidence 11 111 22256777777775210 1 1112223445666 99999999999999
Q ss_pred CcEEEEEeEE--Ee--cCC--------------cee------------------------e----------e---eEEee
Q psy2268 160 GCVKLLTVPV--QE--IDP--------------CSV------------------------Q----------L---NFINT 184 (261)
Q Consensus 160 G~~~~i~~~~--~~--~~G--------------~~~------------------------~----------~---~~~~~ 184 (261)
|++++|.+++ .| |+| |.+ + | +++.+
T Consensus 132 G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i~~pC~~C~G~G~v~~ 211 (371)
T COG0484 132 GVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKIIKDPCGKCKGKGRVKK 211 (371)
T ss_pred CceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeECCCCCCCCCCCCeEee
Confidence 9999999982 21 111 211 0 1 37889
Q ss_pred eEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 185 SKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 185 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
.++++|+||+|+.+|++||++|+|+++++ +|||||+|.|++|+.|.|+|+|||++++|++.+|+||++|.||||..
T Consensus 212 ~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl~g 290 (371)
T COG0484 212 KKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTEAALGGEIEVPTLDG 290 (371)
T ss_pred eeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHHHhcCCEEEEEecCC
Confidence 99999999999999999999999999985 79999999999999999999999999999999999999999999864
No 2
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-55 Score=404.11 Aligned_cols=229 Identities=25% Similarity=0.438 Sum_probs=178.5
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN-DVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTP 79 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~-~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~ 79 (261)
|+.|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+||+||.+|++||+||++++..+..+
T Consensus 1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~~~- 79 (369)
T PRK14288 1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAGAS- 79 (369)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCCCC-
Confidence 7899999999999999999999999999999999998 47799999999999999999999999999999876532110
Q ss_pred CCCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhc
Q psy2268 80 LGYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYR 159 (261)
Q Consensus 80 ~~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~ 159 (261)
+ .+ |+.+|+ .|+++|+.+++. .+.+ ..+..+++++| +.+.|.|||+|+|.
T Consensus 80 -~--~~----------~~~~f~---~~~~~F~~~fg~-----g~~~--~~~~~~~~g~d-------i~~~l~vslee~~~ 129 (369)
T PRK14288 80 -Q--SD----------FSDFFE---DLGSFFEDAFGF-----GARG--SKRQKSSIAPD-------YLQTIELSFKEAVF 129 (369)
T ss_pred -c--cc----------cccchh---hHHHHHHhhcCC-----CCcc--cCcCCCCCCCC-------eeEeccccHHHHhC
Confidence 0 01 112221 122222211100 0000 00111233445 99999999999999
Q ss_pred CcEEEEEeEE--Ee--cCC-------------ce----------------------ee-------------eeEEeeeEE
Q psy2268 160 GCVKLLTVPV--QE--IDP-------------CS----------------------VQ-------------LNFINTSKI 187 (261)
Q Consensus 160 G~~~~i~~~~--~~--~~G-------------~~----------------------~~-------------~~~~~~~~~ 187 (261)
|++++|.+.+ .| |.| |. ++ .+++.+.++
T Consensus 130 G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~ 209 (369)
T PRK14288 130 GCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEE 209 (369)
T ss_pred CeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEccccCccCCCcceEEEEEE
Confidence 9999999972 22 111 11 10 135778899
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC--CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST--SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~--~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
++|.||||+++|++|+|+|+|++.++ +|||+|+|++++|+.|+|+|+||+++++|||+|||+|+++.|+||..
T Consensus 210 l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tLdG 284 (369)
T PRK14288 210 IDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKG 284 (369)
T ss_pred EEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcCCEEEeecCCC
Confidence 99999999999999999999998776 89999999999999999999999999999999999999999999975
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.3e-54 Score=394.60 Aligned_cols=235 Identities=21% Similarity=0.287 Sum_probs=178.8
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCCC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGY 82 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~ 82 (261)
+|||+||||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.||+.||+||+++++.+.+.+.++
T Consensus 4 ~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~~~~~~ 83 (372)
T PRK14296 4 KDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSGFSSNF 83 (372)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCCcCcCC
Confidence 79999999999999999999999999999999999888999999999999999999999999999998775321100010
Q ss_pred CCCCccCCCccccccccCC-CCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 83 VPPYEYDRDTKRTFRNFFG-TESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 83 ~~~~~~~~~~~~~f~~~fg-~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
+++.+.|+.+.+ +..+|+++|+.+++. + ......+.+++| +.+.|.|||+|+|+|+
T Consensus 84 -------~~~~~~~~~~~~~g~~~f~d~f~~~fgg--------g-~~~~~~~~~g~d-------i~~~l~ltlee~~~G~ 140 (372)
T PRK14296 84 -------GDFEDLFSNMGSSGFSSFTNIFSDFFGS--------N-KSDYQRSTKGQS-------VSLDIYLTFKELLFGV 140 (372)
T ss_pred -------CccccccccccccccccchhhhhhhcCC--------C-ccCCCCcCCCCC-------eEEEeeccHHHhhCCe
Confidence 011112222211 111244444332110 0 001111233445 9999999999999999
Q ss_pred EEEEEeEE--Ee--cCC--------------ceee---------------------------------------eeEEee
Q psy2268 162 VKLLTVPV--QE--IDP--------------CSVQ---------------------------------------LNFINT 184 (261)
Q Consensus 162 ~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~~~~~~ 184 (261)
+++|.+.+ .| |.| |.++ .+++.+
T Consensus 141 ~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 220 (372)
T PRK14296 141 DKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLE 220 (372)
T ss_pred eEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcCCcceeecccccCCCCceEEEE
Confidence 99999872 11 111 1110 124667
Q ss_pred eEEEEEEecCCCCCCCEEEecCCCCCCC-C--CCcEEEEEEeccCCCeEEe-CCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 185 SKIVHIKIKPGLPEHTVFKFPKEPLEYS-T--SSEVIVITKDKPHDVFWRE-GADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 185 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~-~--~GDl~v~i~v~~h~~f~R~-g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
.++++|.||||+++|++|+|+|+|++.+ + +|||+|+|++++|+.|+|+ |+|||++++|||+|||+|+++.|+||..
T Consensus 221 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tldG 300 (372)
T PRK14296 221 RKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILGNEIIIKTLDG 300 (372)
T ss_pred EEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCCCC
Confidence 7899999999999999999999999875 3 8999999999999999995 8999999999999999999999999975
No 4
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.5e-53 Score=386.47 Aligned_cols=231 Identities=26% Similarity=0.430 Sum_probs=180.8
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTP 79 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~ 79 (261)
|..|||++|||+++||.+|||+|||+||++||||+|+. +.|.++|++|++||+||+||.+|+.||+||+++++.+.+ .
T Consensus 1 m~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~~-~ 79 (365)
T PRK14285 1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGGG-F 79 (365)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCCC-c
Confidence 77899999999999999999999999999999999985 778899999999999999999999999999987754311 1
Q ss_pred CCCCCCCc-c---CCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehH
Q psy2268 80 LGYVPPYE-Y---DRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLE 155 (261)
Q Consensus 80 ~~~~~~~~-~---~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~ 155 (261)
.++.+++. + .+++.++|++|||+. .++ .+...+.+++| +.+.|.|||+
T Consensus 80 ~~~~~g~~~~~~~~~~~~d~f~~~fgg~--------------------~~~-~~~~~~~~g~d-------i~~~l~vtle 131 (365)
T PRK14285 80 EGFSGGFSGFSDIFEDFGDIFDSFFTGN--------------------RGQ-DKNRKHEKGQD-------LTYQIEISLE 131 (365)
T ss_pred cccCCCccccccccccHHHHHHHhhcCC--------------------cCC-CCCcCCCCCCC-------EEEEEEEEHH
Confidence 11111111 0 112334455444320 000 00011234445 9999999999
Q ss_pred hhhcCcEEEEEeEE--Ee--cCC--------------ceee-----------------------------------eeEE
Q psy2268 156 ELYRGCVKLLTVPV--QE--IDP--------------CSVQ-----------------------------------LNFI 182 (261)
Q Consensus 156 e~~~G~~~~i~~~~--~~--~~G--------------~~~~-----------------------------------~~~~ 182 (261)
|+|+|++++|.+.+ .| |.| |.++ .+++
T Consensus 132 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v 211 (365)
T PRK14285 132 DAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSL 211 (365)
T ss_pred HhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCcccccCCCCCCCCCCCEE
Confidence 99999999999972 21 111 1110 1256
Q ss_pred eeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeee
Q psy2268 183 NTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFT 259 (261)
Q Consensus 183 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~ 259 (261)
.+.++++|.||||+++|++|+|+|+|++.++ +|||+|+|++++|+.|+|+|+||+++++|||.|||+|+++.|+||.
T Consensus 212 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tld 291 (365)
T PRK14285 212 KKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIA 291 (365)
T ss_pred eccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHHHhCCCEEEEECCC
Confidence 7789999999999999999999999999875 7999999999999999999999999999999999999999999986
Q ss_pred c
Q psy2268 260 V 260 (261)
Q Consensus 260 ~ 260 (261)
.
T Consensus 292 G 292 (365)
T PRK14285 292 S 292 (365)
T ss_pred C
Confidence 3
No 5
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.7e-53 Score=386.63 Aligned_cols=235 Identities=26% Similarity=0.403 Sum_probs=180.7
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
..|||+||||+++|+.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|+.||+||+++++.+.++.+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~ 82 (372)
T PRK14286 3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAGGFG 82 (372)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccCCCC
Confidence 3799999999999999999999999999999999984 788999999999999999999999999999988764321100
Q ss_pred -CCCCCCc-cCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhh
Q psy2268 81 -GYVPPYE-YDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELY 158 (261)
Q Consensus 81 -~~~~~~~-~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~ 158 (261)
+...++. +.+++.++|++|||+.. ++ ..+......+.+++| +++.|.|||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~ffgg~~---------~~--------~~~~~~~~~~~~g~d-------i~~~l~vtLee~~ 138 (372)
T PRK14286 83 QGAYTDFSDIFGDFGDIFGDFFGGGR---------GG--------GSGGGRRSGPQRGSD-------LRYNLEVSLEDAA 138 (372)
T ss_pred CCCcccccccccchhhHHHHhhCCCc---------cC--------CCcccccCCCCCCCC-------eeEEEEEEHHHHh
Confidence 0000110 01234455666654210 00 000000111233444 9999999999999
Q ss_pred cCcEEEEEeEE--Ee--cCC--------------ceee-----------------------------------eeEEeee
Q psy2268 159 RGCVKLLTVPV--QE--IDP--------------CSVQ-----------------------------------LNFINTS 185 (261)
Q Consensus 159 ~G~~~~i~~~~--~~--~~G--------------~~~~-----------------------------------~~~~~~~ 185 (261)
+|++++|.+.+ .| |.| |.++ .+++.+.
T Consensus 139 ~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~~~~~ 218 (372)
T PRK14286 139 LGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKR 218 (372)
T ss_pred CCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEecccCCCCCCCcEEecc
Confidence 99999999972 22 111 1110 1256677
Q ss_pred EEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 186 KIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 186 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
++++|.||||+++|++|+|+|+|++.++ +|||||+|++++|+.|+|+|+||++++.|||++||+|+++.|+||..
T Consensus 219 ~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG 296 (372)
T PRK14286 219 RTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPTIDG 296 (372)
T ss_pred eEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHHHhCCCEEEEeCCCC
Confidence 8999999999999999999999999875 79999999999999999999999999999999999999999999864
No 6
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-52 Score=385.51 Aligned_cols=227 Identities=28% Similarity=0.403 Sum_probs=179.3
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
|.+|||+||||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|+.||+||++...++.. +.
T Consensus 1 m~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~~~-~~ 79 (378)
T PRK14278 1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAGGG-GG 79 (378)
T ss_pred CCCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCCccccccCC-CC
Confidence 77899999999999999999999999999999999998889999999999999999999999999999864321110 11
Q ss_pred CCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 81 GYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
++..+ | +++.++|++|||+. + ++......+++++| +.+.|.|||+|+|+|
T Consensus 80 g~~~~--f-~~~~d~f~~ffgg~----------g----------~~~~~~~~~~~g~d-------~~~~l~vtLee~~~G 129 (378)
T PRK14278 80 GFGGG--F-GGLGDVFEAFFGGG----------A----------ASRGPRGRVRPGSD-------SLLRMRLDLEECATG 129 (378)
T ss_pred CCCcC--c-CchhHHHHHHhCCC----------C----------CCCCCccCCCCCCC-------eEEEEEEEHHHhcCC
Confidence 11111 1 12345666665421 0 00000011234455 999999999999999
Q ss_pred cEEEEEeEE--Ee--cCC--------------ceee---------------------------------------eeEEe
Q psy2268 161 CVKLLTVPV--QE--IDP--------------CSVQ---------------------------------------LNFIN 183 (261)
Q Consensus 161 ~~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~~~~~ 183 (261)
++++|.+.+ .| |.| |.++ .+++.
T Consensus 130 ~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~ 209 (378)
T PRK14278 130 VTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVR 209 (378)
T ss_pred eEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccceeeCCCCCCCCCceeEe
Confidence 999999972 11 111 2110 02566
Q ss_pred eeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeee
Q psy2268 184 TSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMF 258 (261)
Q Consensus 184 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl 258 (261)
+.++++|.||||+++|++|+|+|+|++.++ +|||+|+|++++|+.|+|+|+||+++++|||.+||+|++++|+||
T Consensus 210 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl 287 (378)
T PRK14278 210 ARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAI 287 (378)
T ss_pred cceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCHHHHhcCCeEEEecC
Confidence 778999999999999999999999999875 799999999999999999999999999999999999999999998
No 7
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.8e-53 Score=387.60 Aligned_cols=245 Identities=19% Similarity=0.295 Sum_probs=180.4
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcC-
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVT- 78 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~- 78 (261)
|.+|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||+||++||+||+++...+..+
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~~ 86 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGGR 86 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhccccccccc
Confidence 46899999999999999999999999999999999984 7899999999999999999999999999997543322110
Q ss_pred ----CCCCCCCCccCC-CccccccccCCC-----CCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEE
Q psy2268 79 ----PLGYVPPYEYDR-DTKRTFRNFFGT-----ESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVH 148 (261)
Q Consensus 79 ----~~~~~~~~~~~~-~~~~~f~~~fg~-----~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~ 148 (261)
+.++ ++|.+.. .....|.++|+. ...|+++|+++++. + ++..+...+.+++ |+.+
T Consensus 87 ~~~~~~~~-~g~~~~~~~~~~d~~~~f~~~~~~~~~~f~d~f~~~fg~------~-~~~~~~~~~~~g~-------di~~ 151 (392)
T PRK14279 87 RFDGGGGF-GGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGGLFNR------G-GGSARPSRPRRGN-------DLET 151 (392)
T ss_pred cccCCCCC-CCccccccccCcChhhhhcccccccccchhhhhhhhhcC------C-CcccccCCCCCCC-------CeEE
Confidence 0011 1111000 000113334421 12344444432110 0 0000011122344 4999
Q ss_pred EEEeehHhhhcCcEEEEEeEE--Ee--cC--------------Ccee----------------------e----------
Q psy2268 149 TVVVSLEELYRGCVKLLTVPV--QE--ID--------------PCSV----------------------Q---------- 178 (261)
Q Consensus 149 ~l~vsl~e~~~G~~~~i~~~~--~~--~~--------------G~~~----------------------~---------- 178 (261)
.|.|||+|+|+|++++|.+.+ .| |. .|.+ +
T Consensus 152 ~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~i~~~C~~ 231 (392)
T PRK14279 152 ETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGSIIEDPCEE 231 (392)
T ss_pred EEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeEEeCCcCCC
Confidence 999999999999999999972 11 11 1111 0
Q ss_pred ---eeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCe
Q psy2268 179 ---LNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQK 252 (261)
Q Consensus 179 ---~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~ 252 (261)
.+++.+.++++|.||||+++|++|+|+|+|++.++ +|||+|+|++++|+.|+|+|+||+++++|||.+||+|++
T Consensus 232 C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~ 311 (392)
T PRK14279 232 CKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELALGST 311 (392)
T ss_pred CCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccHHHHcCCce
Confidence 13577889999999999999999999999999875 799999999999999999999999999999999999999
Q ss_pred EEEeeeec
Q psy2268 253 YTTRMFTV 260 (261)
Q Consensus 253 ~~i~tl~~ 260 (261)
+.|+||..
T Consensus 312 ~~v~~ldg 319 (392)
T PRK14279 312 LSVPTLDG 319 (392)
T ss_pred EEEEcCCc
Confidence 99999863
No 8
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-52 Score=386.01 Aligned_cols=245 Identities=25% Similarity=0.345 Sum_probs=180.5
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
.|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|+.||+||++++..+.++..+
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~~ 80 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGG 80 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcCC
Confidence 489999999999999999999999999999999985 7789999999999999999999999999999876432111000
Q ss_pred CCCCCccCCCccccccccCCCC-CCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGTE-SPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
.++....++...|..+|+.. ..+.++|+.+++... ..|++......+.+++| +.+.|.|||+|+|+|
T Consensus 81 --~g~~~~~~~~~~~~~~f~~~~~~~~d~f~~~fgg~g---~~~~~~~~~~~~~~g~d-------~~~~l~vslee~~~G 148 (391)
T PRK14284 81 --AGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLG---EAFGMRGGPAGARQGAS-------KKVHITLSFEEAAKG 148 (391)
T ss_pred --CCcCcccchhhhccccccccccccccchhhhccCcc---ccccccccCCCcCCCCC-------eEEEEEEEHHHHhCC
Confidence 11111122333444444321 011233322211000 00111000111223444 999999999999999
Q ss_pred cEEEEEeEE--Ee--cC--------------Cceee-----------------------------------eeEEeeeEE
Q psy2268 161 CVKLLTVPV--QE--ID--------------PCSVQ-----------------------------------LNFINTSKI 187 (261)
Q Consensus 161 ~~~~i~~~~--~~--~~--------------G~~~~-----------------------------------~~~~~~~~~ 187 (261)
++++|.+.+ .| |. .|.++ .+++.+.++
T Consensus 149 ~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~ 228 (391)
T PRK14284 149 VEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRS 228 (391)
T ss_pred eeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcccCCcCCCCCCcceecceEE
Confidence 999999972 11 11 11110 125667889
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeee
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFT 259 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~ 259 (261)
++|.||||+++|++|+|+|+|+++++ +|||+|+|++++|+.|+|+|+||+++++|||.+||+|+++.|+||.
T Consensus 229 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tld 303 (391)
T PRK14284 229 VHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALGMKKEIPTLL 303 (391)
T ss_pred EEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHHHHhCCCeEEEeecC
Confidence 99999999999999999999999874 7999999999999999999999999999999999999999999985
No 9
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=4.6e-53 Score=390.98 Aligned_cols=214 Identities=33% Similarity=0.529 Sum_probs=176.5
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
..|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+||+||.+|++||+||++++.++.+
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~---~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~~~---- 99 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD---PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGGEQ---- 99 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch---HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccCCC----
Confidence 4699999999999999999999999999999999964 489999999999999999999999999987653210
Q ss_pred CCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
..++.++|+.|||++ .++..+++++| +.+.|.|||+|+|+|+
T Consensus 100 -------~~d~~d~f~~~Fggg------------------------~~~~~~~rg~d-------i~~~l~vtLee~~~G~ 141 (421)
T PTZ00037 100 -------PADASDLFDLIFGGG------------------------RKPGGKKRGED-------IVSHLKVTLEQIYNGA 141 (421)
T ss_pred -------CcchhhhHHHhhccc------------------------cccccccCCCC-------EEEEeeeeHHHHhCCC
Confidence 123456677666521 00011234455 9999999999999999
Q ss_pred EEEEEeEE--Ee--cC-------------Cceee-----------------------------------------eeEEe
Q psy2268 162 VKLLTVPV--QE--ID-------------PCSVQ-----------------------------------------LNFIN 183 (261)
Q Consensus 162 ~~~i~~~~--~~--~~-------------G~~~~-----------------------------------------~~~~~ 183 (261)
+++|.+.+ .| |. .|.++ .+++.
T Consensus 142 ~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i~~~~~C~~C~G~g~v~ 221 (421)
T PTZ00037 142 MRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKK 221 (421)
T ss_pred ceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceeccccccCCcCCCcceee
Confidence 99999872 21 11 12110 02466
Q ss_pred eeEEEEEEecCCCCCCCEEEecCCCCCCCC--CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 184 TSKIVHIKIKPGLPEHTVFKFPKEPLEYST--SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 184 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+.++++|.||||+.+|++|+|+|+|++.++ +|||||+|++++|+.|+|+|+||+++++|||++||+|+++.|+||.+
T Consensus 222 ~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tLdG 300 (421)
T PTZ00037 222 TRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDG 300 (421)
T ss_pred eeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCCCC
Confidence 778999999999999999999999999877 99999999999999999999999999999999999999999999975
No 10
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-52 Score=385.44 Aligned_cols=231 Identities=22% Similarity=0.311 Sum_probs=180.3
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
+.|||+||||+++||.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|++||+||+++++++.++..+
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~~~~ 82 (380)
T PRK14276 3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGGGAG 82 (380)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCCCCC
Confidence 37999999999999999999999999999999999988899999999999999999999999999999887643211000
Q ss_pred CCCCCcc---CCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhh
Q psy2268 82 YVPPYEY---DRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELY 158 (261)
Q Consensus 82 ~~~~~~~---~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~ 158 (261)
...++.+ .+++.++|++|||+. + +.+....+++++| +.+.|.|||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~----------~-----------~~~~~~~~~~g~d-------i~~~l~vtLee~~ 134 (380)
T PRK14276 83 GFGGFDGSGGFGGFEDIFSSFFGGG----------G-----------ARRNPNAPRQGDD-------LQYRVNLDFEEAI 134 (380)
T ss_pred CCCCccccccccchhhHHHHHhCcc----------c-----------cccCcCCCCCCCC-------EEEEEEEEHHHhc
Confidence 0011110 122334555555420 0 0000111223444 9999999999999
Q ss_pred cCcEEEEEeEE--Ee--cC--------------Cceee---------------------------------------eeE
Q psy2268 159 RGCVKLLTVPV--QE--ID--------------PCSVQ---------------------------------------LNF 181 (261)
Q Consensus 159 ~G~~~~i~~~~--~~--~~--------------G~~~~---------------------------------------~~~ 181 (261)
+|++++|.+.+ .| |. .|.++ .++
T Consensus 135 ~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~ 214 (380)
T PRK14276 135 FGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGH 214 (380)
T ss_pred CCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCccccCCCCCCCCceE
Confidence 99999999972 11 11 12110 135
Q ss_pred EeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeee
Q psy2268 182 INTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMF 258 (261)
Q Consensus 182 ~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl 258 (261)
+.+.++++|.||+|+++|++|+|+|+|++.++ +|||+|+|+|++|+.|+|+|+||+++++|||.+||+|++++|+||
T Consensus 215 ~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tl 294 (380)
T PRK14276 215 EKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPTV 294 (380)
T ss_pred EEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCHHHHhCCCeEEEEcC
Confidence 66778999999999999999999999998764 799999999999999999999999999999999999999999998
Q ss_pred ec
Q psy2268 259 TV 260 (261)
Q Consensus 259 ~~ 260 (261)
..
T Consensus 295 dg 296 (380)
T PRK14276 295 HG 296 (380)
T ss_pred CC
Confidence 63
No 11
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.4e-52 Score=383.21 Aligned_cols=228 Identities=25% Similarity=0.399 Sum_probs=179.7
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCCC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGY 82 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~ 82 (261)
.|||+||||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|+.||+||++++.++.++ .++
T Consensus 4 ~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~-~~~ 82 (376)
T PRK14280 4 RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFGG-GGF 82 (376)
T ss_pred CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcCC-CCC
Confidence 7999999999999999999999999999999999988899999999999999999999999999999887643211 110
Q ss_pred CCCCccCC--CccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 83 VPPYEYDR--DTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 83 ~~~~~~~~--~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
+. ..|.+ ++.++|+.|||+. + .+ +....+++++| +.+.|.|||+|+|+|
T Consensus 83 ~~-~~~~~~~~~~d~f~~~fgg~----------~---------~~--~~~~~~~kg~d-------i~~~l~vtLee~~~G 133 (376)
T PRK14280 83 GG-GDFGGGFGFEDIFSSFFGGG----------G---------RR--RDPNAPRQGAD-------LQYTMTLTFEEAVFG 133 (376)
T ss_pred CC-CCccccccchhhHHHHhCCc----------c---------cc--CcccccccccC-------EEEEEEEEHHHHhCC
Confidence 00 00110 2334555555421 0 00 00111223445 999999999999999
Q ss_pred cEEEEEeEE--Ee--cCC--------------ceee---------------------------------------eeEEe
Q psy2268 161 CVKLLTVPV--QE--IDP--------------CSVQ---------------------------------------LNFIN 183 (261)
Q Consensus 161 ~~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~~~~~ 183 (261)
++++|.+.+ .| |.| |.++ .+++.
T Consensus 134 ~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~ 213 (376)
T PRK14280 134 KEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVR 213 (376)
T ss_pred ceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCCceecCCCCCCCCceEEE
Confidence 999999972 22 111 1110 03567
Q ss_pred eeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 184 TSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 184 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+.++++|.||+|+++|++|+|+|+|++.++ +|||+|+|++++|+.|+|+|+||++++.|||++||+|+++.|+||..
T Consensus 214 ~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldg 293 (376)
T PRK14280 214 KRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPTLHG 293 (376)
T ss_pred EEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCCc
Confidence 788999999999999999999999998764 79999999999999999999999999999999999999999999863
No 12
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.3e-52 Score=383.08 Aligned_cols=228 Identities=25% Similarity=0.365 Sum_probs=178.4
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
.+|||+||||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|+.||+||+++++.+..++.+
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~~~~ 83 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDI 83 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCcccc
Confidence 47999999999999999999999999999999999888899999999999999999999999999999877532111000
Q ss_pred CCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
+.. ..+ +++.++|++|||+. +...+..+++++| +.+.|.|||+|+|+|+
T Consensus 84 ~~~-~~~-~~~~d~f~~~Fgg~----------------------~~~~~~~~~~g~d-------i~~~l~vslee~~~G~ 132 (377)
T PRK14298 84 FRG-ADF-GGFGDIFEMFFGGG----------------------GRRGRMGPRRGSD-------LRYDLYITLEEAAFGV 132 (377)
T ss_pred ccc-CCc-CcchhhhHhhhcCC----------------------CccCCCCCCCCCC-------EEEEEEEEHHHhhCCe
Confidence 000 001 12234444444310 0000111234445 9999999999999999
Q ss_pred EEEEEeEE--Ee--cCC--------------ceee---------------------------------------eeEEee
Q psy2268 162 VKLLTVPV--QE--IDP--------------CSVQ---------------------------------------LNFINT 184 (261)
Q Consensus 162 ~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~~~~~~ 184 (261)
+++|.+.+ .| |.| |.++ .+++.+
T Consensus 133 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 212 (377)
T PRK14298 133 RKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRK 212 (377)
T ss_pred EEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcccCCCCCCCCCccEEEE
Confidence 99999972 22 111 1110 125667
Q ss_pred eEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 185 SKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 185 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
.++++|.||||+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||+++++|||.+||+|+++.|+||..
T Consensus 213 ~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG 291 (377)
T PRK14298 213 TRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTLYG 291 (377)
T ss_pred EEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHHHHhCCCeEEEecCCC
Confidence 88999999999999999999999998653 89999999999999999999999999999999999999999999864
No 13
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.7e-52 Score=380.45 Aligned_cols=226 Identities=23% Similarity=0.366 Sum_probs=179.6
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
..|||++|||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|+.||+||+++++++..+ ++
T Consensus 3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~~-~~ 81 (371)
T PRK14287 3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFGG-GG 81 (371)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccCC-CC
Confidence 36999999999999999999999999999999999888899999999999999999999999999999877543211 11
Q ss_pred CCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
..+ | +++.++|+.|||+.+ +.+....+.+++| +.+.|.|||+|+|+|+
T Consensus 82 -~~~--f-~~~~d~f~~~fgg~~---------------------~~~~~~~~~~g~d-------~~~~l~vslee~~~G~ 129 (371)
T PRK14287 82 -AGD--F-GGFSDIFDMFFGGGG---------------------GRRNPNAPRQGAD-------LQYTMTLEFKEAVFGK 129 (371)
T ss_pred -Ccc--c-cchHHHHHhhhcccc---------------------CCCCCCCCCCCCC-------EEEEEEEEHHHhcCCe
Confidence 011 1 123456666665210 0000011223445 9999999999999999
Q ss_pred EEEEEeEE--Ee--cCC--------------ceee---------------------------------------eeEEee
Q psy2268 162 VKLLTVPV--QE--IDP--------------CSVQ---------------------------------------LNFINT 184 (261)
Q Consensus 162 ~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~~~~~~ 184 (261)
+++|.+.+ .| |.| |.++ .+++.+
T Consensus 130 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 209 (371)
T PRK14287 130 ETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRK 209 (371)
T ss_pred EEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCccccccCCCCCCeeEEee
Confidence 99999972 11 111 1110 024566
Q ss_pred eEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 185 SKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 185 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
.++++|.||||+++|++|+|+|+|++.++ +|||+|+|++++|+.|+|+|+||++++.|||.+||+|++++|+||..
T Consensus 210 ~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldg 288 (371)
T PRK14287 210 RKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLNG 288 (371)
T ss_pred eEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccHHHHhCCCEEEEEcCCC
Confidence 78999999999999999999999998754 89999999999999999999999999999999999999999999864
No 14
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4e-52 Score=382.44 Aligned_cols=244 Identities=24% Similarity=0.426 Sum_probs=184.7
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
|.+|||++|||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||+||+||.+|+.||+||++++..+.....
T Consensus 1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~ 80 (382)
T PRK14291 1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQQQ 80 (382)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCccc
Confidence 67899999999999999999999999999999999998889999999999999999999999999999987654221111
Q ss_pred CCCCCCc-c-CCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhh
Q psy2268 81 GYVPPYE-Y-DRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELY 158 (261)
Q Consensus 81 ~~~~~~~-~-~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~ 158 (261)
+ ..+|. + ..++.++|++||+.. .|+.+|+..++ ..+.......+. .+.|+.+.|.|||+|+|
T Consensus 81 ~-~~~~~~~~~~~~~d~f~~~f~~f-g~~~~fg~~~~-------~~~~~~~~~~~~-------~g~di~~~l~vsLee~~ 144 (382)
T PRK14291 81 G-QEGFSDFGGGNIEDILEDVFDIF-GFGDIFGRRRA-------TRERRKTYQRPV-------KGEDIYQTVEISLEEAY 144 (382)
T ss_pred c-ccccccccCCCHHHHHHHHHHhc-ccccccccccc-------cccccccccccc-------CCCCEEEEEEEEHHHhh
Confidence 1 11111 1 124456677665421 12222211000 000000001112 34459999999999999
Q ss_pred cCcEEEEEeEE--Ee--cCC--------------ceee----------------------------------eeEEeeeE
Q psy2268 159 RGCVKLLTVPV--QE--IDP--------------CSVQ----------------------------------LNFINTSK 186 (261)
Q Consensus 159 ~G~~~~i~~~~--~~--~~G--------------~~~~----------------------------------~~~~~~~~ 186 (261)
+|++++|.+.+ .| |.| |.++ .+++.+.+
T Consensus 145 ~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~C~~C~G~g~v~~~~ 224 (382)
T PRK14291 145 TGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREPCSKCNGRGLVIKKE 224 (382)
T ss_pred CCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEEccCCCCCCCCceEEeee
Confidence 99999999972 21 111 1110 13567889
Q ss_pred EEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 187 IVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 187 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+++|.||||+++|++|+|+|+|++++. +|||||+|++++|+.|+|+|+||++++.|||.+||+|+++.|+||..
T Consensus 225 ~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~ldG 301 (382)
T PRK14291 225 TIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTELEVPLLDG 301 (382)
T ss_pred EEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhCCCEEEEecCCC
Confidence 999999999999999999999998763 99999999999999999999999999999999999999999999754
No 15
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=6.7e-52 Score=381.41 Aligned_cols=239 Identities=22% Similarity=0.348 Sum_probs=182.0
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhh----ccchhhccC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQ----YGEENLKRG 75 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~----~G~~~~~~~ 75 (261)
|..|||+||||+++|+.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|+.||+ ||++++..+
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~~ 86 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRPG 86 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcccccccC
Confidence 56899999999999999999999999999999999984 6789999999999999999999999999 998877532
Q ss_pred CcCCCCCCCCCccCCCccccccccCCCC------CCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEE
Q psy2268 76 VVTPLGYVPPYEYDRDTKRTFRNFFGTE------SPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHT 149 (261)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~f~~~fg~~------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~ 149 (261)
..+ +..+++. .++.++|..+++.. ..|+++|+++ |++......+++++| +.+.
T Consensus 87 ~~~--~~~~~~~--~~~~~~f~~~~~~~~~~~~~~~f~d~f~~~----------fg~~~~~~~~~~g~d-------i~~~ 145 (389)
T PRK14295 87 PGG--GGGGGFN--FDLGDLFGGGAQGGGGAGGGGGLGDVFGGL----------FNRGGRRTQPRRGAD-------VESE 145 (389)
T ss_pred CCC--CCCCCCC--cccccccccccccccccccccchhhhhccc----------ccCCCCCCCCCCCCC-------EEEE
Confidence 110 1011221 23344554332111 1133333321 111101111223444 9999
Q ss_pred EEeehHhhhcCcEEEEEeEE--Ee--cCC--------------ce----------------------ee-----------
Q psy2268 150 VVVSLEELYRGCVKLLTVPV--QE--IDP--------------CS----------------------VQ----------- 178 (261)
Q Consensus 150 l~vsl~e~~~G~~~~i~~~~--~~--~~G--------------~~----------------------~~----------- 178 (261)
|.|||+|+|+|++++|.+.+ .| |.| |. +.
T Consensus 146 l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C 225 (389)
T PRK14295 146 VTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGLIADDPCLVC 225 (389)
T ss_pred EEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeEEeccCCCCC
Confidence 99999999999999999972 11 111 11 10
Q ss_pred --eeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeE
Q psy2268 179 --LNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKY 253 (261)
Q Consensus 179 --~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~ 253 (261)
.+++.+.++++|.||+|+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||+++++|||.+||+|+++
T Consensus 226 ~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~ 305 (389)
T PRK14295 226 KGSGRAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAALGAEV 305 (389)
T ss_pred CCCceEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeecHHHHhCCCeE
Confidence 12567788999999999999999999999998754 7999999999999999999999999999999999999999
Q ss_pred EEeeeec
Q psy2268 254 TTRMFTV 260 (261)
Q Consensus 254 ~i~tl~~ 260 (261)
+|+||..
T Consensus 306 ~I~tldG 312 (389)
T PRK14295 306 RVPTLGG 312 (389)
T ss_pred EEECCCC
Confidence 9999864
No 16
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.5e-52 Score=380.60 Aligned_cols=233 Identities=26% Similarity=0.422 Sum_probs=180.8
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
..|||+||||+++|+.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|++||+||+++++.+.+.+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAGGFGS 82 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccCCCCC
Confidence 4699999999999999999999999999999999985 678999999999999999999999999999988763211110
Q ss_pred CCCCCCccC--CCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhh
Q psy2268 81 GYVPPYEYD--RDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELY 158 (261)
Q Consensus 81 ~~~~~~~~~--~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~ 158 (261)
+...++.++ +++.++|++|||+. | + +..+++..+++++| +.+.|.|||+|+|
T Consensus 83 ~~~~~~~~~~~~~~~d~f~~~fgg~--~-------g----------~~~~~~~~~~kg~d-------i~~~l~vsLee~~ 136 (380)
T PRK14297 83 GGFGGFDFSDMGGFGDIFDSFFGGG--F-------G----------SSSRRRNGPQRGAD-------IEYTINLTFEEAV 136 (380)
T ss_pred CCCCCcCcccccchhHHHHHHhccC--c-------c----------ccccccCCCCCCCC-------EEEEEEEEHHHhc
Confidence 100111111 23446666666521 0 0 00001111234445 9999999999999
Q ss_pred cCcEEEEEeEE--Ee--cCC--------------ceee---------------------------------------eeE
Q psy2268 159 RGCVKLLTVPV--QE--IDP--------------CSVQ---------------------------------------LNF 181 (261)
Q Consensus 159 ~G~~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~~~ 181 (261)
+|++++|.+.+ .| |.| |.++ .++
T Consensus 137 ~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~ 216 (380)
T PRK14297 137 FGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGK 216 (380)
T ss_pred CCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCceEcCCCCCCCCCCeE
Confidence 99999999972 11 111 1110 124
Q ss_pred EeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeee
Q psy2268 182 INTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMF 258 (261)
Q Consensus 182 ~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl 258 (261)
+.+.++++|.||||+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||+++++|||++||+|+++.|+||
T Consensus 217 v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~l 296 (380)
T PRK14297 217 VRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEIKVPTV 296 (380)
T ss_pred EEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcC
Confidence 66788999999999999999999999998764 899999999999999999999999999999999999999999997
Q ss_pred ec
Q psy2268 259 TV 260 (261)
Q Consensus 259 ~~ 260 (261)
..
T Consensus 297 dg 298 (380)
T PRK14297 297 DG 298 (380)
T ss_pred CC
Confidence 53
No 17
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.1e-51 Score=377.90 Aligned_cols=229 Identities=27% Similarity=0.428 Sum_probs=177.8
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
+|||+||||+++|+.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|+.||+||+++++++..+ +
T Consensus 4 ~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~~~--~ 81 (366)
T PRK14294 4 RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTGFS--G 81 (366)
T ss_pred CChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCCCC--C
Confidence 799999999999999999999999999999999984 7789999999999999999999999999999887532111 1
Q ss_pred CCCCCc-cCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 82 YVPPYE-YDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 82 ~~~~~~-~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
+ +++. ..+++.++|++|||. ++ .++.+....+.+++| +.+.|.|||+|+|+|
T Consensus 82 ~-~~~~~~~~~~~d~f~~~fg~-----------g~--------~~~~~~~~~~~~g~d-------~~~~l~lslee~~~G 134 (366)
T PRK14294 82 F-SGFDDIFSSFGDIFEDFFGF-----------GG--------GRRGRSRTAVRAGAD-------LRYDLTLPFLEAAFG 134 (366)
T ss_pred c-CccccchhhhhhhHHHhhcc-----------CC--------CcCCcccCCCCCCCC-------ceEEEEeeHHHhcCC
Confidence 0 1111 001223444444430 00 000000011233445 999999999999999
Q ss_pred cEEEEEeEE--Ee--cCC--------------ceee-----------------------------------eeEEeeeEE
Q psy2268 161 CVKLLTVPV--QE--IDP--------------CSVQ-----------------------------------LNFINTSKI 187 (261)
Q Consensus 161 ~~~~i~~~~--~~--~~G--------------~~~~-----------------------------------~~~~~~~~~ 187 (261)
++++|.+.+ .| |.| |.+. .+++.+.++
T Consensus 135 ~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~ 214 (366)
T PRK14294 135 TEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKT 214 (366)
T ss_pred eEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecCcCCCCCCCceEeeccee
Confidence 999999972 22 111 1110 135677889
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
++|.||||+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||++++.|||.+||+|+++.|+||..
T Consensus 215 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tldG 290 (366)
T PRK14294 215 VQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEG 290 (366)
T ss_pred EEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHHhCCCeEEEECCCC
Confidence 99999999999999999999998753 89999999999999999999999999999999999999999999854
No 18
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-51 Score=378.73 Aligned_cols=234 Identities=23% Similarity=0.393 Sum_probs=179.0
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
..|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|+.||+||+++++.+..++.
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~~ 83 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQG 83 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhccccccccccccC
Confidence 4799999999999999999999999999999999985 778999999999999999999999999999988764211110
Q ss_pred -----CCC-CCCccC-CCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEee
Q psy2268 81 -----GYV-PPYEYD-RDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVS 153 (261)
Q Consensus 81 -----~~~-~~~~~~-~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vs 153 (261)
++. .++.+. +++.++|++||+. +|++ ++.+....+.+++| +.+.|.||
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~d~f~~~F~~------~fgg------------~~~~~~~~~~kg~d-------i~~~l~vt 138 (386)
T PRK14277 84 GFGQGGFGGGGFDFDFGGFGDIFEDIFGD------FFGT------------GRRRAETGPQKGAD-------IRYDLELT 138 (386)
T ss_pred CcCCCCccccCccccccchhHHHHHhhcc------cccC------------CCcCCCCCCCCCCC-------EEEEEEEE
Confidence 100 011110 1223445444431 1110 00000111234445 99999999
Q ss_pred hHhhhcCcEEEEEeEE--Ee--cCC--------------ceee-------------------------------------
Q psy2268 154 LEELYRGCVKLLTVPV--QE--IDP--------------CSVQ------------------------------------- 178 (261)
Q Consensus 154 l~e~~~G~~~~i~~~~--~~--~~G--------------~~~~------------------------------------- 178 (261)
|+|+|+|++++|.+.+ .| |.| |.++
T Consensus 139 Lee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C 218 (386)
T PRK14277 139 FEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKC 218 (386)
T ss_pred HHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCcceeeccCCCCCC
Confidence 9999999999999972 22 211 2110
Q ss_pred --eeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeE
Q psy2268 179 --LNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKY 253 (261)
Q Consensus 179 --~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~ 253 (261)
.+++.+.++++|.||+|+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||+++++|||++||+|+++
T Consensus 219 ~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~ 298 (386)
T PRK14277 219 GGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEI 298 (386)
T ss_pred CCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCHHHHhCCCEE
Confidence 02566778999999999999999999999998653 7999999999999999999999999999999999999999
Q ss_pred EEeeeec
Q psy2268 254 TTRMFTV 260 (261)
Q Consensus 254 ~i~tl~~ 260 (261)
.|+||..
T Consensus 299 ~i~tldG 305 (386)
T PRK14277 299 EIPTLDG 305 (386)
T ss_pred EEEcCCC
Confidence 9999864
No 19
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-51 Score=376.36 Aligned_cols=231 Identities=23% Similarity=0.387 Sum_probs=176.0
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
..|||++|||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|+.||+||+++++++.+ +
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~~-~- 80 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNGG-F- 80 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCCC-C-
Confidence 5799999999999999999999999999999999985 678899999999999999999999999999987753211 1
Q ss_pred CCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 81 GYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
++| . +..++|+ .|+++|+.+++. .+.++ .+...+.+++| +.+.|.|||+|+|+|
T Consensus 81 ---~g~--~-~~~~~~~-------~f~d~f~~~fg~-----g~~~~-~~~~~~~~g~d-------i~~~l~vtLee~~~G 134 (373)
T PRK14301 81 ---GGF--S-SAEDIFS-------HFSDIFGDLFGF-----SGGGS-RRGPRPQAGSD-------LRYNLTVSFRQAAKG 134 (373)
T ss_pred ---CCc--c-ccccccc-------chHHHHHHHhhc-----cCccc-ccCCCCCCCCC-------EEEEEeccHHHHhCC
Confidence 111 1 1111111 122222111000 00000 00111223444 999999999999999
Q ss_pred cEEEEEeEE--Ee--cCC--------------ceee-----------------------------------eeEEeeeEE
Q psy2268 161 CVKLLTVPV--QE--IDP--------------CSVQ-----------------------------------LNFINTSKI 187 (261)
Q Consensus 161 ~~~~i~~~~--~~--~~G--------------~~~~-----------------------------------~~~~~~~~~ 187 (261)
++++|.+.+ .| |.| |.++ .+++.+.++
T Consensus 135 ~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~ 214 (373)
T PRK14301 135 DEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRE 214 (373)
T ss_pred ceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCCCCCCCCCceeccceE
Confidence 999999972 11 111 1110 135677889
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
++|.||+|+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||+++++|||.+||+|+++.|+||..
T Consensus 215 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tldG 290 (373)
T PRK14301 215 LKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDD 290 (373)
T ss_pred EEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhCCCeEEEecCCc
Confidence 99999999999999999999998763 89999999999999999999999999999999999999999999864
No 20
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.3e-51 Score=377.15 Aligned_cols=248 Identities=25% Similarity=0.389 Sum_probs=181.4
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTP 79 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~ 79 (261)
|..|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||+++++.+...+
T Consensus 1 ~~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~~ 80 (397)
T PRK14281 1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASG 80 (397)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhccccccC
Confidence 77899999999999999999999999999999999985 67889999999999999999999999999998876321100
Q ss_pred CCCCCCCcc-CCCccccc---cccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehH
Q psy2268 80 LGYVPPYEY-DRDTKRTF---RNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLE 155 (261)
Q Consensus 80 ~~~~~~~~~-~~~~~~~f---~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~ 155 (261)
.+ ++|.. ..+..++| ++|||+...+..- .. .++...+++...+. ++.. ...+.|+++.|.|||+
T Consensus 81 ~~--~~~~~~~~~~~d~f~~f~~~Fgg~~~~~~~-----~~-~~~~~~~~g~~~~~-~~~~---~~~g~di~~~l~vtLe 148 (397)
T PRK14281 81 GG--PGYGGGGGDFNDIFSAFNDMFGGGARRGGG-----SP-FGFEDVFGGGGRRR-RASA---GIPGTDLKIRLKLTLE 148 (397)
T ss_pred CC--CCCCcCCCCHHHHHHHHHHHhCCCcccccc-----cc-cccccccCCCcccc-cccC---CCCCCCEEEEEEeEHH
Confidence 00 11100 01223333 4666542111100 00 00000111100000 0000 0124459999999999
Q ss_pred hhhcCcEEEEEeE--EEe--cCC-------------ceee---------------------------------------e
Q psy2268 156 ELYRGCVKLLTVP--VQE--IDP-------------CSVQ---------------------------------------L 179 (261)
Q Consensus 156 e~~~G~~~~i~~~--~~~--~~G-------------~~~~---------------------------------------~ 179 (261)
|+|+|++++|.+. +.| |.| |.+. .
T Consensus 149 e~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~ 228 (397)
T PRK14281 149 EIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGGEGRVVKDRCPACYGE 228 (397)
T ss_pred HHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcceeeeeCCCCCCCCCC
Confidence 9999999999997 222 111 1110 0
Q ss_pred eEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEe
Q psy2268 180 NFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTR 256 (261)
Q Consensus 180 ~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~ 256 (261)
+++.++++++|.||||+++|++|+|+|+|++.++ +|||+|+|++++|+.|+|+|+||++++.|||.+||+|+++.|+
T Consensus 229 g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~ 308 (397)
T PRK14281 229 GIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVSYPDLVLGTKVEVP 308 (397)
T ss_pred ccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEEecHHHHhcCCeEEee
Confidence 2456778999999999999999999999998764 8999999999999999999999999999999999999999999
Q ss_pred eeec
Q psy2268 257 MFTV 260 (261)
Q Consensus 257 tl~~ 260 (261)
||..
T Consensus 309 tldg 312 (397)
T PRK14281 309 TLDG 312 (397)
T ss_pred cCCc
Confidence 9853
No 21
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.3e-51 Score=372.37 Aligned_cols=235 Identities=21% Similarity=0.322 Sum_probs=176.2
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTP 79 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~ 79 (261)
..|||+||||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||+||+||.+|+.||+||++++..+..+.
T Consensus 3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~~ 82 (369)
T PRK14282 3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQET 82 (369)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCccccccccccC
Confidence 4799999999999999999999999999999999974 57889999999999999999999999999988765321110
Q ss_pred CCCCCCCccCCCccccccc---cCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHh
Q psy2268 80 LGYVPPYEYDRDTKRTFRN---FFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEE 156 (261)
Q Consensus 80 ~~~~~~~~~~~~~~~~f~~---~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e 156 (261)
.+ .+++ + .++|.. +|+. +.|+.||++.+ ++.+.+..+.+++| +.+.|.|||+|
T Consensus 83 ~~-~g~~-~----~~~~~~~~~~~~~-d~f~~~fgg~~----------~~~~~~~~~~~g~d-------i~~~l~~slee 138 (369)
T PRK14282 83 ES-GGGF-F----EDIFKDFENIFNR-DIFDIFFGERR----------TQEEQREYARRGED-------IRYEIEVTLSD 138 (369)
T ss_pred CC-CCcc-c----ccccccccccccc-hhhhHhhcccC----------CcccccCCCCCCCC-------eEEEEEEEHHH
Confidence 00 0111 0 111211 1211 12222322100 00000111223444 99999999999
Q ss_pred hhcCcEEEEEeEE--Ee--cCC--------------ceee---------------------------------------e
Q psy2268 157 LYRGCVKLLTVPV--QE--IDP--------------CSVQ---------------------------------------L 179 (261)
Q Consensus 157 ~~~G~~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~ 179 (261)
+|+|++++|.+.+ .| |.| |.++ .
T Consensus 139 ~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~ 218 (369)
T PRK14282 139 LINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGS 218 (369)
T ss_pred hcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcceeCCCCCCCCCCc
Confidence 9999999999872 11 111 2110 1
Q ss_pred eEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEe
Q psy2268 180 NFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTR 256 (261)
Q Consensus 180 ~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~ 256 (261)
+++.+.++++|.||||+.+|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||++++.|||.|||+|+++.|+
T Consensus 219 g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~ 298 (369)
T PRK14282 219 GRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEVP 298 (369)
T ss_pred eeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCHHHHhCCCEEEEe
Confidence 3567778999999999999999999999998654 7999999999999999999999999999999999999999999
Q ss_pred eeec
Q psy2268 257 MFTV 260 (261)
Q Consensus 257 tl~~ 260 (261)
||..
T Consensus 299 ~ldG 302 (369)
T PRK14282 299 LPEG 302 (369)
T ss_pred CCCC
Confidence 9753
No 22
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-50 Score=360.37 Aligned_cols=220 Identities=27% Similarity=0.399 Sum_probs=173.2
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCC--
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTP-- 79 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~-- 79 (261)
..|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+||+++...+..++
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~~~ 82 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGPPP 82 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCCCC
Confidence 589999999999999999999999999999999998888999999999999999999999999999998654321111
Q ss_pred C-CCCCCCc-c-CCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHh
Q psy2268 80 L-GYVPPYE-Y-DRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEE 156 (261)
Q Consensus 80 ~-~~~~~~~-~-~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e 156 (261)
. +...++. + .+++.++|++|||+.+.++.+ + ..+.. ....+ +.|.|+++++.|||+|
T Consensus 83 ~~~~~~~~~~~~~~~~~d~f~~~fgg~~~~~~~----g-------~~~~~--~~~~~-------~~g~dl~~~l~isL~e 142 (291)
T PRK14299 83 GPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGF----G-------DLFGS--VGRRA-------RKGRDLEAELPLTLEE 142 (291)
T ss_pred CCCCCCCccccCcCCHHHHHHHHhCCCCCCCCc----c-------ccccc--ccCCC-------CCCCCEEEEEEecHHH
Confidence 0 0001110 1 124456777777632111000 0 00000 00111 2345599999999999
Q ss_pred hhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCCCCcEEEEEEeccCCCeEEeCCcE
Q psy2268 157 LYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYSTSSEVIVITKDKPHDVFWREGADL 236 (261)
Q Consensus 157 ~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~GDl~v~i~v~~h~~f~R~g~DL 236 (261)
++.||++++.+. | ++++|+||||+++|++|+++|+|++. |||+|+|++++|+.|+|+|+||
T Consensus 143 a~~G~~~~i~l~-----g-----------~~~~V~Ip~G~~~G~~ir~~g~G~~~---GDL~v~i~v~~h~~f~R~G~DL 203 (291)
T PRK14299 143 AYRGGEKVVEVA-----G-----------ERLSVRIPPGVREGQVIRLAGKGRQG---GDLYLVVRLLPHPVFRLEGDDL 203 (291)
T ss_pred HhCCCeEEEeeC-----C-----------EEEEEecCCCcCCCcEEEECCCCCCC---CCEEEEEEEcCCCCeEEECCEE
Confidence 999999998753 2 46899999999999999999999973 9999999999999999999999
Q ss_pred EEEeecCHHHHhcCCeEEEeeeec
Q psy2268 237 HMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 237 ~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+++++|||.+||+|+++.|+||..
T Consensus 204 ~~~~~Isl~eAl~G~~~~v~tldG 227 (291)
T PRK14299 204 YATVDVPAPIAVVGGKVRVMTLDG 227 (291)
T ss_pred EEEEecCHHHHhCCCEEEEECCCC
Confidence 999999999999999999999864
No 23
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.5e-50 Score=367.05 Aligned_cols=235 Identities=23% Similarity=0.380 Sum_probs=181.3
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVT 78 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~ 78 (261)
|..|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||++++..+. +
T Consensus 1 m~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~~-~ 79 (365)
T PRK14290 1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAGG-S 79 (365)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccCC-C
Confidence 67899999999999999999999999999999999985 37899999999999999999999999999998765311 1
Q ss_pred CCCCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCC-CCCCCCCCCCCccccCCCceEEEEEeehHhh
Q psy2268 79 PLGYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTA-TNLQGEKGSKQDITLSSNQQVHTVVVSLEEL 157 (261)
Q Consensus 79 ~~~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~ 157 (261)
+.++ .++...+++.++|+.|||+. |.. +.+++ ......+++++| +.+.|.|||+|+
T Consensus 80 ~~~~-~~~~~~~~~~d~f~~~fg~~--~~~-------------~~~~~~~~~~~~~~~~~d-------i~~~l~lsLee~ 136 (365)
T PRK14290 80 NFNW-DNFTHFSDINDIFNQIFGGN--FGS-------------DFFSGFGNQQSTRNIDLD-------IYTNLDISLEDA 136 (365)
T ss_pred Cccc-cccccccchhHHHHHHhcCc--ccc-------------ccccccccccCCCCCCCC-------EEEEEEecHHHh
Confidence 1010 11111135567787777631 100 00010 000011122445 999999999999
Q ss_pred hcCcEEEEEeEE--Ee--cCC-------------ceee---------------------------------------eeE
Q psy2268 158 YRGCVKLLTVPV--QE--IDP-------------CSVQ---------------------------------------LNF 181 (261)
Q Consensus 158 ~~G~~~~i~~~~--~~--~~G-------------~~~~---------------------------------------~~~ 181 (261)
|+|++++|.+.+ .| |.| |.++ .++
T Consensus 137 ~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~ 216 (365)
T PRK14290 137 YYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGT 216 (365)
T ss_pred cCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeEccCCCCCCCCcee
Confidence 999999999972 22 111 1110 135
Q ss_pred EeeeEEEEEEecCCCCCCCEEEecCCCCCCCC-CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeee
Q psy2268 182 INTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFT 259 (261)
Q Consensus 182 ~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~ 259 (261)
+.+.++++|.||||+.+|++|+|+|+|+.... +|||+|+|++++|+.|+|+|+||++++.|||.+||+|+++.|+|+.
T Consensus 217 v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~~ 295 (365)
T PRK14290 217 VVVNEDISVKIPKGATDNLRLRVKGKGQSYGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFR 295 (365)
T ss_pred EEEeeEEEEEECCCCCCCcEEEEccccCCCCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHHHhCCCEEEEEcCC
Confidence 67789999999999999999999999997323 9999999999999999999999999999999999999999999975
No 24
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.7e-50 Score=368.60 Aligned_cols=229 Identities=28% Similarity=0.419 Sum_probs=176.4
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
..|||+||||+++||.+|||+|||+||++||||+|+. +.|+++|++|++||++|+||.+|+.||+||++++..+.. +.
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-~~ 81 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG-GG 81 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCC-CC
Confidence 4799999999999999999999999999999999984 678899999999999999999999999999987753211 01
Q ss_pred CCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 81 GYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
++. ++ .+..++|++||+ .||++ + .+ ..+..+++++| +.+.|.|||+|+|+|
T Consensus 82 ~~~-~~---~~~~~~f~~~f~------~~fgg-~---------~~--~~~~~~~~g~d-------i~~~l~vsLee~~~G 132 (371)
T PRK10767 82 GFG-GG---GGFGDIFGDIFG------DIFGG-G---------RG--GGRQRARRGAD-------LRYNMEITLEEAVRG 132 (371)
T ss_pred CCC-Cc---cccccchhhhhh------hhccC-C---------cc--ccCCCCCCCCC-------eEEEEEeehHHhhCC
Confidence 110 10 011122333322 11110 0 00 01111234445 999999999999999
Q ss_pred cEEEEEeEE--Ee--cCC--------------ceee-----------------------------------eeEEeeeEE
Q psy2268 161 CVKLLTVPV--QE--IDP--------------CSVQ-----------------------------------LNFINTSKI 187 (261)
Q Consensus 161 ~~~~i~~~~--~~--~~G--------------~~~~-----------------------------------~~~~~~~~~ 187 (261)
++++|.+.+ .| |.| |.+. .+++.+.++
T Consensus 133 ~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~~ 212 (371)
T PRK10767 133 VTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKT 212 (371)
T ss_pred eeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCCCCCCCCCceEeeeee
Confidence 999999972 21 111 1110 135677889
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
++|.||||+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||++++.|||++||+|+++.|+||..
T Consensus 213 l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~ldG 288 (371)
T PRK10767 213 LSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG 288 (371)
T ss_pred EEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhCCCeEEEecCCC
Confidence 99999999999999999999998654 89999999999999999999999999999999999999999999864
No 25
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.2e-50 Score=368.67 Aligned_cols=233 Identities=24% Similarity=0.392 Sum_probs=180.4
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCc-CC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVV-TP 79 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~-~~ 79 (261)
|..|||+||||+++||.+|||+|||+||++||||+|+++.++++|++|++||++|+|+.+|+.||+||++++..+.. ++
T Consensus 1 ~~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~ 80 (372)
T PRK14300 1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSRGG 80 (372)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccccccccccccCC
Confidence 78999999999999999999999999999999999987778899999999999999999999999999987753210 11
Q ss_pred CCCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhc
Q psy2268 80 LGYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYR 159 (261)
Q Consensus 80 ~~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~ 159 (261)
.+..++ |+.+..++|++||+. +|++ + +.......+.+++ |+++.|.|||+|+++
T Consensus 81 ~g~~~~--~~~~~~~~f~~~f~~------~~gg-~----------~~~~~~~~~~~g~-------di~~~l~~sLee~~~ 134 (372)
T PRK14300 81 GGNHGG--FHPDINDIFGDFFSD------FMGG-S----------RRSRPTSSKVRGS-------DLKYNLTINLEEAFH 134 (372)
T ss_pred CCCCCc--cccchhhhHHHHHHh------hcCC-C----------CCCCCCcCCCCCC-------CeeEEEEEEHHHHhC
Confidence 110011 111233455555542 1110 0 0000000112344 499999999999999
Q ss_pred CcEEEEEeEE--Ee--cCC--------------ceee-----------------------------------eeEEeeeE
Q psy2268 160 GCVKLLTVPV--QE--IDP--------------CSVQ-----------------------------------LNFINTSK 186 (261)
Q Consensus 160 G~~~~i~~~~--~~--~~G--------------~~~~-----------------------------------~~~~~~~~ 186 (261)
|++++|.+.+ .| |.| |.++ .+++.+.+
T Consensus 135 G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~~~ 214 (372)
T PRK14300 135 GIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQR 214 (372)
T ss_pred CceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCCCCCCCCCceEEEeeE
Confidence 9999999972 22 111 1111 13567889
Q ss_pred EEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeee
Q psy2268 187 IVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFT 259 (261)
Q Consensus 187 ~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~ 259 (261)
+++|.||||+++|++|+++|+|++.+. +|||+|+|++++|+.|+|+|+||++++.|+|++||+|+++.|+||.
T Consensus 215 ~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~ld 290 (372)
T PRK14300 215 NLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIE 290 (372)
T ss_pred EEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHhCCCEEEEecCC
Confidence 999999999999999999999998653 8999999999999999999999999999999999999999999986
No 26
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=5.4e-50 Score=365.68 Aligned_cols=230 Identities=27% Similarity=0.421 Sum_probs=177.9
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCCCC
Q psy2268 4 NYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGYV 83 (261)
Q Consensus 4 d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~~ 83 (261)
|||+||||+++|+.+|||+|||+||++||||+|+++.++++|++|++||++|+|+.+|+.||+||+++++.+.....+..
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~~~ 80 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGGGF 80 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCCCc
Confidence 79999999999999999999999999999999987778999999999999999999999999999987764221101100
Q ss_pred CCCcc--CCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 84 PPYEY--DRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 84 ~~~~~--~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
.++.. .+++.++|+.|||+.. + .+ ......+.+++| +.++|.|||+|+|+|+
T Consensus 81 ~~~~~~~~~~~~~~f~~~fg~~~---------g---------~~-~~~~~~~~~~~d-------~~~~l~vsLee~~~G~ 134 (354)
T TIGR02349 81 NGFDIGFFGDFGDIFGDFFGGGG---------G---------SG-RRRRSGPRRGED-------LRYDLELTFEEAVFGV 134 (354)
T ss_pred CCccccCcCchhhhHHHHhccCc---------c---------cC-ccccCCCCCCCC-------eEEEEEEEHHHHhCCe
Confidence 11110 1223455555554210 0 00 000111233444 9999999999999999
Q ss_pred EEEEEeE--EEe--cCC--------------ceee---------------------------------------eeEEee
Q psy2268 162 VKLLTVP--VQE--IDP--------------CSVQ---------------------------------------LNFINT 184 (261)
Q Consensus 162 ~~~i~~~--~~~--~~G--------------~~~~---------------------------------------~~~~~~ 184 (261)
+++|.+. +.| |.| |.++ .+++.+
T Consensus 135 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 214 (354)
T TIGR02349 135 EKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKE 214 (354)
T ss_pred eEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecCCCCCCCCCCcEecc
Confidence 9999997 222 111 1110 025677
Q ss_pred eEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeee
Q psy2268 185 SKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFT 259 (261)
Q Consensus 185 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~ 259 (261)
.++++|.||||+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||++++.|||++||+|+++.|+||.
T Consensus 215 ~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~ld 292 (354)
T TIGR02349 215 RKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLD 292 (354)
T ss_pred cceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHHhCCCeEEEecCC
Confidence 78999999999999999999999998653 8999999999999999999999999999999999999999999975
No 27
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-49 Score=361.90 Aligned_cols=232 Identities=25% Similarity=0.384 Sum_probs=178.9
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
..|||++|||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|++||+||++++..... + +
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~-~-~ 81 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQ-E-D 81 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccccc-c-c
Confidence 4799999999999999999999999999999999988889999999999999999999999999999987652110 0 0
Q ss_pred CCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
.+. ..++.++|..|++ +|+++|..++ |++.. ...+++++| +.++|.|||+|+|+|+
T Consensus 82 ---~~~-~~~~~~~~~~~~~---~~~~~f~~~~---------fgg~~-~~~~~kg~d-------i~~~l~vsLed~~~G~ 137 (378)
T PRK14283 82 ---IFN-NINFEDIFQGFGF---GIGNIFDMFG---------FGGGS-RHGPQRGAD-------IYTEVEITLEEAASGV 137 (378)
T ss_pred ---ccc-ccCcccccccccc---chhhhccccc---------cCCCC-CCCccCCCC-------eEEEeeeeHHHHhCCc
Confidence 000 1122334444432 2333332210 11110 111234445 9999999999999999
Q ss_pred EEEEEeE--EEe--cCC--------------ceee---------------------------------------eeEEee
Q psy2268 162 VKLLTVP--VQE--IDP--------------CSVQ---------------------------------------LNFINT 184 (261)
Q Consensus 162 ~~~i~~~--~~~--~~G--------------~~~~---------------------------------------~~~~~~ 184 (261)
++++.+. +.| |.| |.++ .+++.+
T Consensus 138 ~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~~ 217 (378)
T PRK14283 138 EKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRE 217 (378)
T ss_pred ceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCccceecCCCCCCCCCceeecc
Confidence 9999987 222 111 1110 124567
Q ss_pred eEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeee
Q psy2268 185 SKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFT 259 (261)
Q Consensus 185 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~ 259 (261)
.++++|.||||+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+|+||++++.|||.+|++|+++.|+||.
T Consensus 218 ~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tld 295 (378)
T PRK14283 218 TKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDTVDVPTID 295 (378)
T ss_pred ceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHHHHhcCCeEEEEcCC
Confidence 78999999999999999999999998653 8999999999999999999999999999999999999999999875
No 28
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.3e-49 Score=361.55 Aligned_cols=229 Identities=23% Similarity=0.308 Sum_probs=181.2
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
+.|||++|||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|+.||+||+++..+. .++.+
T Consensus 1 ~~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~-~~~~~ 79 (371)
T PRK14292 1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM-PGGDP 79 (371)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc-cCCcc
Confidence 36999999999999999999999999999999999988899999999999999999999999999998763211 11001
Q ss_pred CCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
+ +++ ..++.++|+.|||+. .+ ++......+++++| +.+.+.|||+|+++|+
T Consensus 80 ~-~~~--~~d~~d~f~~~fg~~-~~------------------~~~~~~~~~~~g~d-------~~~~l~~sLee~~~G~ 130 (371)
T PRK14292 80 F-GGM--GFDPMDIFEQLFGGA-GF------------------GGGRGRRGPARGDD-------LETEARITLEQARAGE 130 (371)
T ss_pred c-Ccc--CCChHHHHHHhhCCC-Cc------------------CCCCCcccccCCCC-------eEEEEeccHHHHcCCe
Confidence 1 111 124567788777631 00 00000011223444 9999999999999999
Q ss_pred EEEEEeEE--Ee--cCC---------------cee--------------------------e-------------eeEEe
Q psy2268 162 VKLLTVPV--QE--IDP---------------CSV--------------------------Q-------------LNFIN 183 (261)
Q Consensus 162 ~~~i~~~~--~~--~~G---------------~~~--------------------------~-------------~~~~~ 183 (261)
++++.+.+ .| |.| |.+ . .+++.
T Consensus 131 ~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~ 210 (371)
T PRK14292 131 EVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTL 210 (371)
T ss_pred EEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccceecCCCCCCCCCceEEe
Confidence 99999982 11 111 111 0 13566
Q ss_pred eeEEEEEEecCCCCCCCEEEecCCCCCCCC-CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 184 TSKIVHIKIKPGLPEHTVFKFPKEPLEYST-SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 184 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+.++++|.||+|+.+|++|+|+|+|++.++ .|||||+|++++|+.|+|+|+||++.+.|+|.+||+|+++.|+||..
T Consensus 211 ~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tldG 288 (371)
T PRK14292 211 KAETVKVKLPRGIDEGYRIRVAGMGNEGPGGNGDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLDG 288 (371)
T ss_pred ecceEEEEECCCCCCCcEEEEecCcCCCCCCCCCEEEEEEEecCCccccchhceeEEeccCHHHHhCCCeEEEECCCC
Confidence 778899999999999999999999999887 89999999999999999999999999999999999999999999864
No 29
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=2e-48 Score=348.63 Aligned_cols=225 Identities=21% Similarity=0.284 Sum_probs=174.4
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcC--CC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVT--PL 80 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~--~~ 80 (261)
.|||++|||+++|+.+|||+|||+||++||||+|+++.++++|++|++||++|+||.+|+.||+||+.....+... +.
T Consensus 4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~~~~~ 83 (306)
T PRK10266 4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQH 83 (306)
T ss_pred CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccccccc
Confidence 7999999999999999999999999999999999888899999999999999999999999999986421111000 00
Q ss_pred CCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 81 GYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
+....+. ..++.++|+.|||.. + +...+..+++ |.|+.++++|||+|++.|
T Consensus 84 ~~~~~~~-~~~~~~~f~~~~g~~----------~-----------~~~~~~~~~k-------g~di~~~v~isLee~~~G 134 (306)
T PRK10266 84 GDGQSFN-AEDFDDIFSSIFGQH----------A-----------RQSRQRPAAR-------GHDIEIEVAVFLEETLTE 134 (306)
T ss_pred CCCCCCC-CCCHHHHHHHHhCCC----------C-----------CCCCCCCCCC-------CCceEEEEEEEHHHhcCC
Confidence 0000111 123445566555421 0 0000011123 445999999999999999
Q ss_pred cEEEEEeEE--EecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCc
Q psy2268 161 CVKLLTVPV--QEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGAD 235 (261)
Q Consensus 161 ~~~~i~~~~--~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~D 235 (261)
|++++.+.+ |++.|... ....++++|.||+|+++|++|+++|+|++.++ +|||+|+|++++|+.|+|+|+|
T Consensus 135 ~~k~i~~~~~~~~g~G~~~----~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~ph~~f~r~g~D 210 (306)
T PRK10266 135 HKRTISYNLPVYNAFGMIE----QEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQD 210 (306)
T ss_pred ceEEEEEecccccCCCeEE----EeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEEcCCCCeEEeCCc
Confidence 999999873 33234220 12236899999999999999999999998754 8999999999999999999999
Q ss_pred EEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 236 LHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 236 L~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
|++++.|||++||+|+++.|+|+..
T Consensus 211 L~~~~~Isl~~al~G~~~~i~~~~g 235 (306)
T PRK10266 211 LEIVVPLAPWEAALGAKVTVPTLKE 235 (306)
T ss_pred eEEEEecCHHHHhCCCEEEeeCCCc
Confidence 9999999999999999999999764
No 30
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.2e-48 Score=354.65 Aligned_cols=240 Identities=23% Similarity=0.338 Sum_probs=177.8
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
..|||++|||+++|+.+|||+|||+||++||||+|+. +.|+++|++|++||++|+||.+|++||+||+++++++.. ..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~-~~ 82 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAG-GG 82 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCC-CC
Confidence 5799999999999999999999999999999999985 689999999999999999999999999999987753211 11
Q ss_pred CCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 81 GYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
++.++ . .+..++|+.| + ..|+.++++.++. . .+++......+.+++ |+++.|.|||+|+|+|
T Consensus 83 ~~~~~-~--~~~~~~f~~f-~--~~fg~~~gg~~~~-~----~~~~~~~~~~~~~g~-------di~~~l~vsLee~~~G 144 (386)
T PRK14289 83 GFSGE-G--MSMEDIFSMF-G--DIFGGHGGGFGGF-G----GFGGGGSQQRVFRGS-------DLRVKVKLNLKEISTG 144 (386)
T ss_pred CCCCC-C--cChhhhhHHh-h--hhhcccccCcccc-c----ccccccccCCCCCCC-------CeEEEEEEEHHHhhCC
Confidence 11110 0 1223333332 1 0111111111000 0 011000001122344 4999999999999999
Q ss_pred cEEEEEeE--EEe--cCC--------------ceee---------------------------------------eeEEe
Q psy2268 161 CVKLLTVP--VQE--IDP--------------CSVQ---------------------------------------LNFIN 183 (261)
Q Consensus 161 ~~~~i~~~--~~~--~~G--------------~~~~---------------------------------------~~~~~ 183 (261)
++++|.+. +.| |+| |.+. .+++.
T Consensus 145 ~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~ 224 (386)
T PRK14289 145 VEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVY 224 (386)
T ss_pred eEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCccccccCcCCCCCCCCcEEe
Confidence 99999998 222 111 2110 03567
Q ss_pred eeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 184 TSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 184 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+.++++|.||+|+++|++|+|+|+|++.+. +|||+|+|++++|+.|+|+++||++++.|+|.+||+|+++.|+||..
T Consensus 225 ~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldg 304 (386)
T PRK14289 225 GEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAVEVPTIDG 304 (386)
T ss_pred eeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEeccCHHHHhCCCeEEeecCCc
Confidence 788999999999999999999999998753 89999999999999999999999999999999999999999999753
No 31
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.3e-48 Score=353.49 Aligned_cols=233 Identities=22% Similarity=0.303 Sum_probs=180.1
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
|..|||+||||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|+.||+||++++.++.. ..
T Consensus 1 ~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~~~-~~ 79 (374)
T PRK14293 1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGAAG-FP 79 (374)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccCCC-cC
Confidence 78899999999999999999999999999999999998889999999999999999999999999999987653210 00
Q ss_pred CCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 81 GYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
++ .+ + ++..++|++||++ |+ +.+++ +. ......+.+++| +.+.|.|||+|+|+|
T Consensus 80 ~~-~~--~-~~~~d~f~~~fg~---~~----~~~~~------~~--~~~~~~~~kg~d-------i~~~l~vsLee~~~G 133 (374)
T PRK14293 80 DM-GD--M-GGFADIFETFFSG---FG----GAGGQ------GG--RRRRRGPQRGDD-------LRYDLKLDFREAIFG 133 (374)
T ss_pred Cc-cc--c-cchHHHHHHHhcc---cC----CCCCC------Cc--cccccCccCCCC-------eEEEEEeeHHHHhCC
Confidence 00 00 1 1234567666652 10 00000 00 000011223444 999999999999999
Q ss_pred cEEEEEeEE--Ee--cCC--------------ceee---------------------------------------eeEEe
Q psy2268 161 CVKLLTVPV--QE--IDP--------------CSVQ---------------------------------------LNFIN 183 (261)
Q Consensus 161 ~~~~i~~~~--~~--~~G--------------~~~~---------------------------------------~~~~~ 183 (261)
++++|.+.+ .| |.| |.++ .+++.
T Consensus 134 ~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~g~v~ 213 (374)
T PRK14293 134 GEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQ 213 (374)
T ss_pred ceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCcceeEeccCCCCCCCCcccc
Confidence 999999872 11 111 1110 02456
Q ss_pred eeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 184 TSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 184 ~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+.++++|.||||+++|++|+|+|+|++... +|||+|+|++++|+.|+|+|+||+++++|||.+||+|+++.|+||..
T Consensus 214 ~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~ldG 293 (374)
T PRK14293 214 VTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDG 293 (374)
T ss_pred cceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCHHHHhCCCEEEecCCCC
Confidence 678899999999999999999999998653 79999999999999999999999999999999999999999999864
No 32
>KOG0712|consensus
Probab=100.00 E-value=4.3e-47 Score=336.12 Aligned_cols=215 Identities=33% Similarity=0.526 Sum_probs=178.1
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
+..||+||+|+++||.+|||||||+||++||||+||+ +.++|++|++||||||||+||++||+||+++++.|.+++ |
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~--~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~~-g 79 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD--AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGGG-G 79 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCCC-C
Confidence 4679999999999999999999999999999999986 779999999999999999999999999999997653321 1
Q ss_pred CCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
+ .+ |++||+. + +.+ ++.+.+++| +.+.+.|||+|+|.|.
T Consensus 80 ----~--~~-----f~~~F~~--------g------------~~~---~~~~~rg~~-------~~~~~~~~Le~~y~G~ 118 (337)
T KOG0712|consen 80 ----F--GG-----FSQFFGF--------G------------GNG---GRGRQRGKD-------VVHQLKVTLEELYMGK 118 (337)
T ss_pred ----C--cc-----HHHhccC--------C------------CcC---ccccccCCC-------ceEEEEEEHHHhhcCC
Confidence 0 00 6666651 0 111 111223566 9999999999999999
Q ss_pred EEEEEeE--EEe---------------cCCceee-----------------------e-------------------eEE
Q psy2268 162 VKLLTVP--VQE---------------IDPCSVQ-----------------------L-------------------NFI 182 (261)
Q Consensus 162 ~~~i~~~--~~~---------------~~G~~~~-----------------------~-------------------~~~ 182 (261)
++++.++ ++| |..|.++ | +++
T Consensus 119 s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~~~~kd~C~~C~G~~~v 198 (337)
T KOG0712|consen 119 SKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGETISLKDRCKTCSGAKVV 198 (337)
T ss_pred ccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCCccccccccccCcccccchhh
Confidence 9998887 222 1112210 0 267
Q ss_pred eeeEEEEEEecCCCCCCCEEEecCCCCCCCC--CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 183 NTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 183 ~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
...+.++|.|++|++++++|.+.|++++.+. +||+++.|..++|+.|.|+|+||++..+|+|.+||+|+.+.+.||+.
T Consensus 199 ~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~ldG 278 (337)
T KOG0712|consen 199 REKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISLVEALCGFQRVWETLDG 278 (337)
T ss_pred hhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecccccccceecccccceeeecchhhccccceEEEEccCC
Confidence 7889999999999999999999999999888 99999999999999999999999999999999999999999998864
No 33
>KOG0713|consensus
Probab=100.00 E-value=4.5e-39 Score=281.93 Aligned_cols=226 Identities=26% Similarity=0.354 Sum_probs=172.7
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPL 80 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~ 80 (261)
++|||+||||+++|+..|||+||||||++||||+||+ |.|.+.|++|+.||||||||.+|+.||+||+++++..+-...
T Consensus 15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~~~ 94 (336)
T KOG0713|consen 15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKDGE 94 (336)
T ss_pred CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhcccccccc
Confidence 5899999999999999999999999999999999997 999999999999999999999999999999999985421111
Q ss_pred CCCCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcC
Q psy2268 81 GYVPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRG 160 (261)
Q Consensus 81 ~~~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G 160 (261)
+... ..++|+.||+. |+. .+++.......+++.+ +...++.++++.|.|
T Consensus 95 ~g~~-------~~~~f~~~f~d---fg~--------------~~~g~~~~e~~~~g~~-------V~~~~e~~~~h~y~~ 143 (336)
T KOG0713|consen 95 GGGG-------GNDIFSAFFGD---FGV--------------TVGGNPLEEALPKGSD-------VSSDLEKQLEHFYMG 143 (336)
T ss_pred cCCc-------ccchHHHhhcc---ccc--------------ccCCCcccCCCCCCce-------EEeehhhchhhhhcc
Confidence 1001 13567666653 111 1111111112333444 999999999999988
Q ss_pred cEEEEEeE----------EEe-c-------CC------------cee--eeeEEeeeEEEEEEecCCCCCCCEEEecCCC
Q psy2268 161 CVKLLTVP----------VQE-I-------DP------------CSV--QLNFINTSKIVHIKIKPGLPEHTVFKFPKEP 208 (261)
Q Consensus 161 ~~~~i~~~----------~~~-~-------~G------------~~~--~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G 208 (261)
...+..-. +.| | .. |.. .-.+...+.++++.+..|...+....+..+|
T Consensus 144 ~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 223 (336)
T KOG0713|consen 144 NFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFERGDADGPEEIFELEG 223 (336)
T ss_pred cHHHHHhccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCccceeecCCceeeeeeecccCCceeeeeccC
Confidence 64322211 111 1 11 110 1135678889999999999999999999999
Q ss_pred CCCCC--CCcEEEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeee
Q psy2268 209 LEYST--SSEVIVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMF 258 (261)
Q Consensus 209 ~~~~~--~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl 258 (261)
.+... +||+++.+...+|+.|.|+++||++.+.+++..+|.|....+..|
T Consensus 224 ~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~ 275 (336)
T KOG0713|consen 224 EPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHL 275 (336)
T ss_pred CcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhcc
Confidence 87665 999999999999999999999999999999999999987766554
No 34
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=9.8e-36 Score=283.30 Aligned_cols=114 Identities=12% Similarity=0.032 Sum_probs=101.9
Q ss_pred CCceEEEEEeehHhhhcCcEEEEEeE--EEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC-CCcEEE
Q psy2268 143 SNQQVHTVVVSLEELYRGCVKLLTVP--VQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-SSEVIV 219 (261)
Q Consensus 143 g~di~~~l~vsl~e~~~G~~~~i~~~--~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~GDl~v 219 (261)
.-+|.+.+.|+|+++|+||+++|++. ++|+.|+. .+.+.++++|+||+|+++|++|||+|+|+.+++ +|||+|
T Consensus 656 ~~dI~y~l~vtLEeLY~G~tKkIKitR~V~~g~G~k----tvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~GDLyV 731 (871)
T TIGR03835 656 NVNLVYEEEVPQILFFNNQIKEIKYTRHTVDGNTES----TTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGCGDLKV 731 (871)
T ss_pred ccceEEecccCHHHHhCCCeEEEEEEEeeccCCCcc----eeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCCCCEEE
Confidence 34788899999999999999999997 44444432 256678999999999999999999999999877 899999
Q ss_pred EEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 220 ITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 220 ~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+|++++|+.|+|+|+|||+++.|+|.+||+|+++.|+||.+
T Consensus 732 vIkVKPHp~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDG 772 (871)
T TIGR03835 732 VFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNK 772 (871)
T ss_pred EEEEcCCCCeEEECCeEEEEEecCHHHHhcCCEEEeeCCCC
Confidence 99999999999999999999999999999999999999964
No 35
>KOG0715|consensus
Probab=99.98 E-value=3.6e-32 Score=240.43 Aligned_cols=192 Identities=30% Similarity=0.489 Sum_probs=155.4
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCCCC
Q psy2268 4 NYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGYV 83 (261)
Q Consensus 4 d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~~ 83 (261)
|||+||||+++|+..|||+||++||++||||.|.+++|.++|++|.+|||+|+|+++|+.||++|..+. + +
T Consensus 44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~--~---~---- 114 (288)
T KOG0715|consen 44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGLEQH--G---E---- 114 (288)
T ss_pred chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcc--c---c----
Confidence 899999999999999999999999999999999999999999999999999999999999999998751 0 0
Q ss_pred CCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCcEE
Q psy2268 84 PPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGCVK 163 (261)
Q Consensus 84 ~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~~~ 163 (261)
+.+++.++|..+|+. + . .....+.+ .++.+.++|++|..|+.+
T Consensus 115 ----~~g~~~~~~~~~~~~-~--------~-----------------~~~~~~~~-------~~~d~~~~f~~A~~g~~~ 157 (288)
T KOG0715|consen 115 ----FGGNPFDVFLEFFGG-K--------M-----------------NKRVPDKD-------QYYDLSLDFKEAVRGSKK 157 (288)
T ss_pred ----ccCCccchHHHhhcc-c--------c-----------------cccccCcc-------cccccccCHHHHhhcccc
Confidence 123566677666653 0 0 00111223 778899999999999988
Q ss_pred EEEeEEE-ecCCcee--------------------------------ee--------------------eEEeeeEEEEE
Q psy2268 164 LLTVPVQ-EIDPCSV--------------------------------QL--------------------NFINTSKIVHI 190 (261)
Q Consensus 164 ~i~~~~~-~~~G~~~--------------------------------~~--------------------~~~~~~~~~~V 190 (261)
.+.+.+. .|.+|.+ +| +.+...+.+.|
T Consensus 158 ~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~~v~~~k~i~i 237 (288)
T KOG0715|consen 158 RISFNVLSDCETCFGSGAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAGQVRRAKDIMI 237 (288)
T ss_pred ceEEEeecccccccCcCcccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcchhhhhheeEEe
Confidence 8888722 1111110 00 25667789999
Q ss_pred EecCCCCCCCEEEecCCCCCCCCCCcEEEEEEeccCCCeEEeCCcEEEEeecCHHH
Q psy2268 191 KIKPGLPEHTVFKFPKEPLEYSTSSEVIVITKDKPHDVFWREGADLHMKKNVSLTP 246 (261)
Q Consensus 191 ~Ip~G~~~G~~i~~~g~G~~~~~~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl~e 246 (261)
.+|+|+.++.+|++.+.|.. ||+|.+.|.+++.|+|+|.|+++++.|++.|
T Consensus 238 ~~~~g~~~~~~l~~~~~~~~-----~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 238 VLPAGVRSADTLRFAGHGND-----DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred ecCcccccccEEEEecCCcc-----eEEEEEEeccCcccccccCcccccccccccC
Confidence 99999999999999998774 9999999999999999999999999998864
No 36
>KOG0714|consensus
Probab=99.94 E-value=6.7e-26 Score=200.35 Aligned_cols=250 Identities=35% Similarity=0.511 Sum_probs=181.6
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--hHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDV--KSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVT 78 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~--~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~ 78 (261)
|..|||++|+|.++|+..+|++|||++|++||||+|+.+ .+.++|+++.+||++|+|+.+|..||+||++++.+....
T Consensus 1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~ 80 (306)
T KOG0714|consen 1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSF 80 (306)
T ss_pred CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCC
Confidence 788999999999999999999999999999999999876 666789999999999999999999999999766642111
Q ss_pred CCCCCCC--CccCCCccccccccCCCCCCcccc------cccCCC-C-CCCC----CCCCCCCC-------CCCCCCCCC
Q psy2268 79 PLGYVPP--YEYDRDTKRTFRNFFGTESPFADL------LNAYRP-P-KKQE----TSGDTATN-------LQGEKGSKQ 137 (261)
Q Consensus 79 ~~~~~~~--~~~~~~~~~~f~~~fg~~~~f~~~------~~~~~~-~-~~~~----~~~~~~~~-------~~~~~~~~~ 137 (261)
...+..+ +....++.++|..|||..++|+.. +....+ . .... ....+..+ ......+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (306)
T KOG0714|consen 81 SSSFTSELFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSDRSARQSP 160 (306)
T ss_pred CCCCCCCcceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCcccccccccccccccCCC
Confidence 1111111 223456778899999977776643 000000 0 0000 00000000 001111222
Q ss_pred ccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC--CC
Q psy2268 138 DITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--SS 215 (261)
Q Consensus 138 d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~G 215 (261)
. +...+.+++++.+.|+.+...+.+...+... .. .......+.+.+++++..|+.+....+|+..++ +-
T Consensus 161 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 231 (306)
T KOG0714|consen 161 P-------VEHPLRVSLEDLYKGESKKMKISRQSFTSNG-RE-GSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPA 231 (306)
T ss_pred C-------ccCCcceeHHHhccccceeeecccccccCCc-cc-ccCccceeEEeccCCcccccceeccccccccCCcCcc
Confidence 2 4555566999999999999988732211111 00 135567789999999999999999999988776 89
Q ss_pred cEEEEEEeccCCCeEEeCCcEEEE--eecCHHHHhcCCeEEEeeee
Q psy2268 216 EVIVITKDKPHDVFWREGADLHMK--KNVSLTPQERNQKYTTRMFT 259 (261)
Q Consensus 216 Dl~v~i~v~~h~~f~R~g~DL~~~--~~Isl~eAl~G~~~~i~tl~ 259 (261)
++++.+..++|+.|.|.+.||... ..|++.+|++|....++++.
T Consensus 232 ~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~ 277 (306)
T KOG0714|consen 232 DIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLD 277 (306)
T ss_pred eeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeeccc
Confidence 999999999999999999999999 99999999999999998653
No 37
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=1.4e-20 Score=159.35 Aligned_cols=217 Identities=25% Similarity=0.299 Sum_probs=139.1
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hh-HHHHHHHHHHHHhhcchhhhhhhhhhcc-chhhccCCc
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VK-SQAMFTLICEAYEVLSDKFRKAIYDQYG-EENLKRGVV 77 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~-a~~~f~~i~~Ay~~L~d~~~r~~YD~~G-~~~~~~~~~ 77 (261)
|..+||+||||+++|+..||++|||++|++||||+++. +. +.+.|+.|++||++|+|+.+|+.||+++ .....+...
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~~ 83 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKSY 83 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCccccc
Confidence 45789999999999999999999999999999999996 43 8999999999999999999999999984 222211100
Q ss_pred CCCCCCCCCccCC--CccccccccCCCCC------CcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEE
Q psy2268 78 TPLGYVPPYEYDR--DTKRTFRNFFGTES------PFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHT 149 (261)
Q Consensus 78 ~~~~~~~~~~~~~--~~~~~f~~~fg~~~------~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~ 149 (261)
.. ...+.... .....+...++... ...++..............+............. .+....
T Consensus 84 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 154 (237)
T COG2214 84 RE---SAAFPIEGSLQLTGLYEEWRGKRNKTERKASLADLLSRGLSGLAAALSLFADEAALRSGSLRR------RDLAAN 154 (237)
T ss_pred cc---cccccccccccHHHHHHhhcccccccccccchhhhcccccccccccccccccccccccccccc------cceeee
Confidence 00 00000000 11122222222110 001111000000000000000000000000000 037888
Q ss_pred EEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC-CCcEEEEEEeccCCC
Q psy2268 150 VVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-SSEVIVITKDKPHDV 228 (261)
Q Consensus 150 l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~GDl~v~i~v~~h~~ 228 (261)
+.+++.+++.+....+... .. ....+.+|.++..+..+++.+.+..... .++.+..+..++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (237)
T COG2214 155 LADNFEEALAGVKKAVARL----LG-----------KALKSTIKAGALEGKALRLKGLLKSARGALGKARLKELSKRHPP 219 (237)
T ss_pred eeccHHHHhcCcceeeecc----cc-----------ccccccCCcccccCceeeecccCCcCCCCcccceeeeeccCCCC
Confidence 9999999999998888754 22 2344899999999999999999876656 899999999999999
Q ss_pred eEEeCCcEEEEeecCH
Q psy2268 229 FWREGADLHMKKNVSL 244 (261)
Q Consensus 229 f~R~g~DL~~~~~Isl 244 (261)
|..++.++ ..+.+
T Consensus 220 ~~~~~~~~---~~~~~ 232 (237)
T COG2214 220 FALEGDDK---YPVKL 232 (237)
T ss_pred ccccCCcc---cccch
Confidence 99999999 44444
No 38
>KOG0716|consensus
Probab=99.84 E-value=1.3e-21 Score=167.05 Aligned_cols=72 Identities=42% Similarity=0.755 Sum_probs=68.8
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLK 73 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~ 73 (261)
..|+|+||||+++|+.++||||||+||++||||++++ |++.++|++||+||++|+||.+|..||.||+.++.
T Consensus 30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 3589999999999999999999999999999999998 89999999999999999999999999999998775
No 39
>KOG0717|consensus
Probab=99.83 E-value=2.6e-21 Score=175.31 Aligned_cols=75 Identities=44% Similarity=0.654 Sum_probs=70.9
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRG 75 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~ 75 (261)
|++.||+||||.++|++.|||++||+||++||||+||+ .+|.+.|+.|+.||+|||||..|++||.+.++.+.+-
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~ 82 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGK 82 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCC
Confidence 56889999999999999999999999999999999998 7899999999999999999999999999999888653
No 40
>KOG0718|consensus
Probab=99.83 E-value=2.9e-21 Score=175.14 Aligned_cols=71 Identities=42% Similarity=0.744 Sum_probs=67.9
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc----hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhc
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND----VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLK 73 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~ 73 (261)
.|||.+|+|+++||.+|||+|||++++.|||||+.+ ..|+++|+.|++||||||||.+|++||.||++|++
T Consensus 9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 589999999999999999999999999999999875 46899999999999999999999999999999998
No 41
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.82 E-value=6.4e-21 Score=186.22 Aligned_cols=73 Identities=27% Similarity=0.470 Sum_probs=68.7
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhcc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKR 74 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~ 74 (261)
+.+||+||||+++||..+||+|||+||++||||+|+++.|.++|++|++||+|||||.+|+.||+||..++..
T Consensus 572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~ 644 (1136)
T PTZ00341 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644 (1136)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence 4689999999999999999999999999999999997778899999999999999999999999999987653
No 42
>KOG0691|consensus
Probab=99.81 E-value=2.9e-20 Score=163.67 Aligned_cols=72 Identities=40% Similarity=0.700 Sum_probs=68.2
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLK 73 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~ 73 (261)
+.|||++|||+.+|+.+||++|||+.|++||||+||+ |.|.++|+.+.+||+||+|+.+|+.||++|..+..
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~ 76 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSS 76 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhccc
Confidence 4689999999999999999999999999999999996 89999999999999999999999999999987653
No 43
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.78 E-value=1.7e-19 Score=124.82 Aligned_cols=62 Identities=45% Similarity=0.715 Sum_probs=59.0
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--hHHHHHHHHHHHHhhcchhhhhhhhh
Q psy2268 4 NYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDV--KSQAMFTLICEAYEVLSDKFRKAIYD 65 (261)
Q Consensus 4 d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~--~a~~~f~~i~~Ay~~L~d~~~r~~YD 65 (261)
|||+||||+++++.++||+||+++++++|||+++.. .+.+.|+.|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 689999999999999999999999999999998764 48899999999999999999999998
No 44
>KOG0624|consensus
Probab=99.78 E-value=3.6e-19 Score=157.19 Aligned_cols=72 Identities=38% Similarity=0.594 Sum_probs=66.0
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc----hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhcc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND----VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKR 74 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~----~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~ 74 (261)
.+|||+||||.++|+..||.|||||+|.+||||..++ ..|+++|-.|..|-|||+||++|+.||. |++.+..
T Consensus 393 kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD~ 468 (504)
T KOG0624|consen 393 KRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLDP 468 (504)
T ss_pred cchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCCh
Confidence 4799999999999999999999999999999999887 3688999999999999999999999999 6666653
No 45
>KOG0719|consensus
Probab=99.78 E-value=2.2e-19 Score=150.08 Aligned_cols=70 Identities=34% Similarity=0.657 Sum_probs=65.1
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc---hhHHHHHHHHHHHHhhcchhhhhhhhhhccch
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND---VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEE 70 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~ 70 (261)
|.+|+|+||||.++|+.++|++|||+||++||||+++. ..|.++|+.++.||.||+|.++|+.||+.|.-
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i 84 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI 84 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence 34699999999999999999999999999999999964 67899999999999999999999999998854
No 46
>PHA03102 Small T antigen; Reviewed
Probab=99.73 E-value=3.1e-18 Score=137.37 Aligned_cols=83 Identities=16% Similarity=0.265 Sum_probs=69.8
Q ss_pred CCccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCC
Q psy2268 4 NYYAVLGLTRGA--SDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLG 81 (261)
Q Consensus 4 d~y~~Lgv~~~a--~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~ 81 (261)
.+|+||||+++| |.++||+|||++|+++|||++++ .++|++|++||++|+|+.+|..||.+|.+......
T Consensus 6 ~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~---~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~~----- 77 (153)
T PHA03102 6 ELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD---EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEEE----- 77 (153)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch---hHHHHHHHHHHHHHhhHHHhccccccCCccccccc-----
Confidence 479999999999 99999999999999999999864 47999999999999999999999999987543211
Q ss_pred CCCCCccCCCccccccccCCC
Q psy2268 82 YVPPYEYDRDTKRTFRNFFGT 102 (261)
Q Consensus 82 ~~~~~~~~~~~~~~f~~~fg~ 102 (261)
..+.+.|...||+
T Consensus 78 --------~~~~~~f~~~fg~ 90 (153)
T PHA03102 78 --------DVPSGYVGATFGD 90 (153)
T ss_pred --------ccHHHHhhhhcCC
Confidence 1255667766764
No 47
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.71 E-value=1.8e-17 Score=113.06 Aligned_cols=57 Identities=46% Similarity=0.714 Sum_probs=53.9
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--chhHHHHHHHHHHHHhhcchhh
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN--DVKSQAMFTLICEAYEVLSDKF 59 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~--~~~a~~~f~~i~~Ay~~L~d~~ 59 (261)
.|||+||||+++++.++||+||+++++++|||+++ .+.+.+.|++|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999999999999999999999999999998 5778899999999999999985
No 48
>KOG0721|consensus
Probab=99.69 E-value=3.1e-17 Score=136.10 Aligned_cols=69 Identities=35% Similarity=0.713 Sum_probs=64.6
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccch
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEE 70 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~ 70 (261)
..|+|+||||+++|++.|||||||+|++++|||++++ .+.++.|..|++||+.|+|+..|..|..||+.
T Consensus 98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~P 167 (230)
T KOG0721|consen 98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNP 167 (230)
T ss_pred cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCC
Confidence 3689999999999999999999999999999999998 56678899999999999999999999999975
No 49
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.69 E-value=5.1e-17 Score=108.74 Aligned_cols=54 Identities=50% Similarity=0.839 Sum_probs=51.7
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcch
Q psy2268 4 NYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSD 57 (261)
Q Consensus 4 d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d 57 (261)
|||++|||+++++.++||++||+|+++||||+++. +.+.+.|++|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999987 7788999999999999986
No 50
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.57 E-value=3.9e-15 Score=121.88 Aligned_cols=65 Identities=20% Similarity=0.404 Sum_probs=57.7
Q ss_pred CCCCccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCch----hHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 2 GFNYYAVLGLTRG--ASDYDIKMAFRKKAIQYNPERNNDV----KSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 2 ~~d~y~~Lgv~~~--a~~~eik~ayr~la~~~hPd~~~~~----~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
+.|||++|||++. ++..+|+++||+|++++|||+++.. .+.+.+..||+||++|+||.+|+.|+-
T Consensus 1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL 71 (166)
T PRK01356 1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML 71 (166)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3699999999996 7899999999999999999998752 234568899999999999999999976
No 51
>KOG0722|consensus
Probab=99.57 E-value=1e-15 Score=129.70 Aligned_cols=65 Identities=38% Similarity=0.601 Sum_probs=62.4
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.|+|+||||+++|+..||.+|||+||+++|||+++++++.+.|+.|..||++|.|...|..||-+
T Consensus 33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydya 97 (329)
T KOG0722|consen 33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYA 97 (329)
T ss_pred hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHH
Confidence 58999999999999999999999999999999999988889999999999999999999999964
No 52
>KOG0550|consensus
Probab=99.54 E-value=5.4e-15 Score=133.33 Aligned_cols=64 Identities=38% Similarity=0.686 Sum_probs=61.3
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.|||.||||+++|+..|||+|||++|+.||||+|.. .+++.+|+++-+||.+|+||.+|..||.
T Consensus 373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds 438 (486)
T KOG0550|consen 373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS 438 (486)
T ss_pred hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence 589999999999999999999999999999999975 5788999999999999999999999998
No 53
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.54 E-value=1e-14 Score=120.08 Aligned_cols=64 Identities=17% Similarity=0.365 Sum_probs=57.3
Q ss_pred CCCccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCc--h----hHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 3 FNYYAVLGLTRG--ASDYDIKMAFRKKAIQYNPERNND--V----KSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 3 ~d~y~~Lgv~~~--a~~~eik~ayr~la~~~hPd~~~~--~----~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.|||++|||++. ++..+|+++||++++++|||+.+. + .+.+.|..||+||++|+||.+|+.|+-
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 389999999995 788999999999999999999764 1 256789999999999999999999985
No 54
>KOG0720|consensus
Probab=99.49 E-value=2.2e-14 Score=130.60 Aligned_cols=66 Identities=32% Similarity=0.533 Sum_probs=63.8
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+|.|.+|||++++++++|||.|||+|..-|||||-.+.|+|.|+.++.|||+|+|+.+|..||.-
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e 299 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLE 299 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHH
Confidence 469999999999999999999999999999999999999999999999999999999999999984
No 55
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=5.5e-14 Score=116.09 Aligned_cols=65 Identities=23% Similarity=0.329 Sum_probs=57.0
Q ss_pred CCCCccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCc-hh-----HHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 2 GFNYYAVLGLTRG--ASDYDIKMAFRKKAIQYNPERNND-VK-----SQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 2 ~~d~y~~Lgv~~~--a~~~eik~ayr~la~~~hPd~~~~-~~-----a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
..|||++|||++. ++..+|+++||+|++++|||+++. +. +.+.+..||+||++|+||.+|+.|+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4699999999995 689999999999999999999864 22 34557899999999999999999995
No 56
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.48 E-value=7.6e-14 Score=114.80 Aligned_cols=65 Identities=22% Similarity=0.224 Sum_probs=58.3
Q ss_pred CCCCccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCc------hhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 2 GFNYYAVLGLTRG--ASDYDIKMAFRKKAIQYNPERNND------VKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 2 ~~d~y~~Lgv~~~--a~~~eik~ayr~la~~~hPd~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
..|||++|||++. .+..+|+++||+|++++|||++.. ..+.+.|..||+||++|+||.+|+.|+-
T Consensus 3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 4689999999997 668999999999999999999864 2356789999999999999999999996
No 57
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.41 E-value=2.2e-13 Score=103.99 Aligned_cols=51 Identities=22% Similarity=0.330 Sum_probs=46.3
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcc
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLS 56 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~ 56 (261)
.++|++|||+++||.+||+++||+|++++|||++. ..+.|++|++||++|.
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG---s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGG---STYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999964 3478899999999984
No 58
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.37 E-value=4.9e-13 Score=117.60 Aligned_cols=56 Identities=27% Similarity=0.399 Sum_probs=50.5
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--------hhHHHHHHHHHHHHhhcchh
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--------VKSQAMFTLICEAYEVLSDK 58 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--------~~a~~~f~~i~~Ay~~L~d~ 58 (261)
.++|++|||+++||.+|||+|||+|+++||||++.. +.++++|++|++||++|+..
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999632 45889999999999999853
No 59
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.36 E-value=8.8e-13 Score=121.29 Aligned_cols=89 Identities=19% Similarity=0.233 Sum_probs=79.3
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|++.|+||+++++|||.||+.|+++.|... +| ++++|+||+|+++|++|+|+|+|++..+
T Consensus 269 ~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~l----dG-----------~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~ 333 (369)
T PRK14282 269 PRFKRSGSDLIYDVTIDYLQAILGTTVEVPLP----EG-----------GTTMLKIPPGTQPETVFRLKGKGLPNMRYGR 333 (369)
T ss_pred CcEEEecCCEEEEEEeCHHHHhCCCEEEEeCC----CC-----------cEEEEEeCCCcCCCCEEEECCCCCCCCCCCC
Confidence 34889999999999999999999999999865 55 3589999999999999999999998643
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEEe
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMKK 240 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~~ 240 (261)
+|||||+|.|+.|+.|++++.+|+..+
T Consensus 334 ~GDL~V~~~v~~P~~l~~~~~~ll~~l 360 (369)
T PRK14282 334 RGDLIVNVHVEIPKRLSREERKLLKEL 360 (369)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 799999999999999999998887653
No 60
>PHA02624 large T antigen; Provisional
Probab=99.31 E-value=1.3e-12 Score=124.42 Aligned_cols=60 Identities=20% Similarity=0.345 Sum_probs=55.8
Q ss_pred CCCccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhh
Q psy2268 3 FNYYAVLGLTRGA--SDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYD 65 (261)
Q Consensus 3 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD 65 (261)
.++|++|||+++| +.++||+|||++|++||||++.+ +++|++|++||++|+|+.+|..|+
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd---eekfk~Ln~AYevL~d~~k~~r~~ 72 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD---EEKMKRLNSLYKKLQEGVKSARQS 72 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc---HHHHHHHHHHHHHHhcHHHhhhcc
Confidence 3689999999999 99999999999999999999754 589999999999999999999993
No 61
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.30 E-value=3.2e-12 Score=117.48 Aligned_cols=88 Identities=14% Similarity=0.118 Sum_probs=78.2
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|+|+||+++++|||.||+.|+++.|... +| .++|.||+|+++|++|+|+|+|++.++
T Consensus 257 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl----dG------------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~ 320 (366)
T PRK14294 257 EFFERDGNDVHCKVPISFVQAALGAQIEVPTL----EG------------ERELKIPKGTQPGDIFRFKGKGIPSLRGGG 320 (366)
T ss_pred CcceecCCCEEEEEEeCHHHHhCCCeEEEECC----CC------------cEEEEECCCcCCCCEEEECCCCCCCCCCCC
Confidence 34889999999999999999999999999865 55 359999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEEe
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMKK 240 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~~ 240 (261)
+|||||+|.|..|+.|++++.+|+..+
T Consensus 321 ~GDL~V~~~v~~P~~l~~~q~~ll~~~ 347 (366)
T PRK14294 321 RGDQIIEVEVKVPTRLTKKQEELLTEF 347 (366)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 799999999999999999888777654
No 62
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.30 E-value=3.1e-12 Score=117.51 Aligned_cols=88 Identities=11% Similarity=0.064 Sum_probs=79.0
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+.|+|+|+||+++++|||.||+.|+++.|.+. +| +++|.||+|+++|++|+|+|+|++.++
T Consensus 263 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~~~----~g------------~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~ 326 (365)
T PRK14290 263 PNIQRINDDLYVDQKINFPQAALGGEIEIKLF----RE------------KYNLKIPEGTQPGEVLKIKGAGMPHLNGHG 326 (365)
T ss_pred CCEEEecCCEEEEEEeCHHHHhCCCEEEEEcC----Cc------------eEEEEECCccCCCcEEEECCCCCCCCCCCC
Confidence 45889999999999999999999999999864 33 589999999999999999999998754
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEEe
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMKK 240 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~~ 240 (261)
+|||||+|.|..|+.|++++.+|+.++
T Consensus 327 ~GDL~V~~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 327 SGDLLVRINVEVPKRLTSKQKELIREF 353 (365)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 799999999999999999998887663
No 63
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.29 E-value=6.1e-12 Score=91.06 Aligned_cols=71 Identities=20% Similarity=0.217 Sum_probs=56.5
Q ss_pred ceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC----CCcEEEE
Q psy2268 145 QQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST----SSEVIVI 220 (261)
Q Consensus 145 di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~----~GDl~v~ 220 (261)
|++++++|||.||+.|++++|... +| +.++|.||+|+++|++++++|+|.+... +|||+|+
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l----~g-----------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~ 65 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL----DG-----------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVK 65 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T----TS------------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC----CC-----------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEE
Confidence 599999999999999999999865 55 4689999999999999999999996433 8999999
Q ss_pred EEeccCCCeE
Q psy2268 221 TKDKPHDVFW 230 (261)
Q Consensus 221 i~v~~h~~f~ 230 (261)
++|.-+..++
T Consensus 66 ~~V~~P~~ls 75 (81)
T PF01556_consen 66 FEVEFPKKLS 75 (81)
T ss_dssp EEEE--SSTS
T ss_pred EEEECCCCCC
Confidence 9999776554
No 64
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.28 E-value=3.1e-12 Score=116.30 Aligned_cols=70 Identities=30% Similarity=0.641 Sum_probs=64.4
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc------hhHHHHHHHHHHHHhhcchhhhhhhhhhccchh
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND------VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEEN 71 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~ 71 (261)
..|+|+||||+.+++..+||++||+|+.|+||||-+. .+-++++.+|++||+.|+|...|..|-.||..-
T Consensus 97 ~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd 172 (610)
T COG5407 97 GFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPD 172 (610)
T ss_pred CCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCC
Confidence 3689999999999999999999999999999999875 466889999999999999999999999998653
No 65
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.27 E-value=5.1e-12 Score=116.01 Aligned_cols=88 Identities=16% Similarity=0.116 Sum_probs=77.6
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+.|+++|+||+++++|||.||+.|+++.|+.. +| +.++|+||+|+++|++|+|+|+|++.++
T Consensus 259 ~~f~R~G~dL~~~~~Isl~eAl~G~~~~i~tl----dG-----------~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~ 323 (365)
T PRK14285 259 KIFKRNGKDLYATLPISFTQAALGKEIKIQTI----AS-----------KKIKIKIPKGTENDEQIIIKNEGMPILHTEK 323 (365)
T ss_pred CCeEEeccceEEEEecCHHHHhCCCEEEEECC----CC-----------CEEEEEeCCCcCCCcEEEECCCCccCCCCCC
Confidence 45889999999999999999999999999865 55 3589999999999999999999998765
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMK 239 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~ 239 (261)
.|||||+|.|+.|+.|++++..|+..
T Consensus 324 ~GDL~V~~~v~~P~~l~~~q~~~l~~ 349 (365)
T PRK14285 324 FGNLILIIKIKTPKNLNSNAIKLLEN 349 (365)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 69999999999999998887665543
No 66
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=6e-12 Score=116.01 Aligned_cols=88 Identities=15% Similarity=0.194 Sum_probs=78.3
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|+||+++++|||.||+.|+++.|... +| .++|+||+|+++|++++|+|+|.+..+
T Consensus 258 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl----dG------------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~ 321 (377)
T PRK14298 258 DYFERVGDDIISEIPISFTQAALGADIMVPTL----YG------------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHG 321 (377)
T ss_pred CCeEEEcCcEEEEEEeCHHHHhCCCeEEEecC----CC------------CEEEEeCCCcccCCEEEECCCCCCCCCCCC
Confidence 45889999999999999999999999999865 45 378999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEEe
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMKK 240 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~~ 240 (261)
+|||||+|.|..|+.+++++.+|+..+
T Consensus 322 ~GDL~V~~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 322 KGDQLVKVIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 799999999999999999888777654
No 67
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=6.4e-12 Score=115.72 Aligned_cols=88 Identities=13% Similarity=0.072 Sum_probs=78.6
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|++.|+||+++++|||.||+.|++++|... +| .++|.||+|+++|++++++|+|.+.++
T Consensus 255 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~l----dG------------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~ 318 (371)
T PRK10767 255 PIFERDGNDLYCEVPISFTTAALGGEIEVPTL----DG------------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGA 318 (371)
T ss_pred CCEEEecCCEEEEEEeCHHHHhCCCeEEEecC----CC------------cEEEEeCCCCCCCCEEEECCCCcCCCCCCC
Confidence 44889999999999999999999999999765 45 489999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEEe
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMKK 240 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~~ 240 (261)
+|||||+|.|..|+.|++++.+|+.++
T Consensus 319 ~GDL~v~~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 319 RGDLYCQVVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 799999999999999999988887664
No 68
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.26 E-value=6.3e-12 Score=112.11 Aligned_cols=87 Identities=13% Similarity=0.000 Sum_probs=76.4
Q ss_pred CCccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC--
Q psy2268 136 KQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-- 213 (261)
Q Consensus 136 ~~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-- 213 (261)
.+.|+++|+||+++++|||.+|+.|+++.|... +| .++|.||+|+++|++++++|+|.+...
T Consensus 193 h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tl----dG------------~~~v~ip~~~~~g~~~rl~g~G~p~~~~~ 256 (291)
T PRK14299 193 HPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTL----DG------------PVEVTIPPRTQAGRKLRLKGKGWPRGPAG 256 (291)
T ss_pred CCCeEEECCEEEEEEecCHHHHhCCCEEEEECC----CC------------CEEEEeCCCcCCCCEEEECCCCCCCCCCC
Confidence 345889999999999999999999999999876 55 379999999999999999999998543
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHM 238 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~ 238 (261)
.|||+|++.|..|+.++.++.+++.
T Consensus 257 ~GDL~v~~~V~~P~~l~~~~~~~l~ 281 (291)
T PRK14299 257 RGDQYAEVRITIPTRPTPEEERLYK 281 (291)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHH
Confidence 7999999999999998887766544
No 69
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.23 E-value=1.4e-11 Score=114.20 Aligned_cols=89 Identities=10% Similarity=0.117 Sum_probs=75.9
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|+||+++++|||+||+.|++++|... + +...++|+||+|+++|++++|+|+|.+..+
T Consensus 271 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tl----d----------~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~ 336 (391)
T PRK14284 271 PVFERRGDDLILELPIGFVDAALGMKKEIPTL----L----------KEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKG 336 (391)
T ss_pred CCceeecCCEEEEEEecHHHHhCCCeEEEeec----C----------CCcEEEEEECCccCCCeEEEECCCCCCCCCCCC
Confidence 34789999999999999999999999999854 3 013689999999999999999999998754
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMK 239 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~ 239 (261)
+|||||+|.|..++.++.+..+|+..
T Consensus 337 ~GDL~V~~~v~~P~~l~~~q~~ll~~ 362 (391)
T PRK14284 337 RGDLLVRISVETPQNLSEEQKELLRQ 362 (391)
T ss_pred CCcEEEEEEEECCCCCCHHHHHHHHH
Confidence 79999999999998887776655544
No 70
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.21 E-value=1.4e-11 Score=113.30 Aligned_cols=87 Identities=10% Similarity=0.082 Sum_probs=75.7
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|+||++++.|||.||+.|++++|... +| .++|+||+|+++|++++|+|+|.+..+
T Consensus 255 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~~l----dg------------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~ 318 (371)
T PRK14287 255 EFFERDGDDIYCEMPLTFPQVALGDEIEVPTL----NG------------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRG 318 (371)
T ss_pred CCEEEecCCeEEEEeccHHHHhCCCEEEEEcC----CC------------CEEEEECCCccCCcEEEEcCCCccCCCCCC
Confidence 45889999999999999999999999999865 44 379999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMK 239 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~ 239 (261)
+|||||+|.|..|+.++++...|+..
T Consensus 319 ~GDL~V~~~v~~P~~l~~~q~~ll~~ 344 (371)
T PRK14287 319 QGDQHVQVRVVTPKNLTEKEKELMRE 344 (371)
T ss_pred CCCEEEEEEEEcCCCCCHHHHHHHHH
Confidence 79999999999999888776555444
No 71
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=2.4e-11 Score=111.95 Aligned_cols=85 Identities=16% Similarity=0.135 Sum_probs=74.0
Q ss_pred ccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---C
Q psy2268 138 DITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---S 214 (261)
Q Consensus 138 d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~ 214 (261)
.|++.|+||+++++|||.||+.|+++.|+.. +| .++|.||+|+++|++++|+|+|.+.++ +
T Consensus 258 ~f~r~G~DL~~~~~Isl~eAl~G~~~~v~tl----dG------------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~ 321 (373)
T PRK14301 258 IFQRQGQDLVVTQEISFVQAALGDRIEVPTL----DD------------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQK 321 (373)
T ss_pred CceeecCcEEEEEEecHHHHhCCCeEEEecC----Cc------------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCC
Confidence 4788999999999999999999999999865 44 389999999999999999999998754 7
Q ss_pred CcEEEEEEeccCCCeEEeCCcEEE
Q psy2268 215 SEVIVITKDKPHDVFWREGADLHM 238 (261)
Q Consensus 215 GDl~v~i~v~~h~~f~R~g~DL~~ 238 (261)
|||||+|.|..|+.++.+..+|+.
T Consensus 322 GDL~I~~~V~~P~~l~~~q~~~l~ 345 (373)
T PRK14301 322 GDLLVEVSVVTPTKLTKRQEELLR 345 (373)
T ss_pred CCEEEEEEEECCCCCCHHHHHHHH
Confidence 999999999999887766555444
No 72
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.20 E-value=2.2e-11 Score=112.03 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=74.3
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+.|++.|+||+++++|||.||++|+++.|... +| +.++|+||+|+++|++++|+|+|.+.++
T Consensus 251 ~~f~R~G~DL~~~~~Isl~eAllG~~i~v~tL----dG-----------~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~ 315 (369)
T PRK14288 251 EHFKREGCDLFIEAPVFFTTIALGHTIKVPSL----KG-----------DELELKIPRNARDRQTFAFRNEGVKHPESSY 315 (369)
T ss_pred CCcEEeCCEEEEEEecCHHHHhcCCEEEeecC----CC-----------CEEEEEeCCCCCCCcEEEEcCCCCCCCCCCC
Confidence 45889999999999999999999999999876 56 2589999999999999999999998665
Q ss_pred CCcEEEEEEeccCCCeEEeCCcE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADL 236 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL 236 (261)
.|||||++.|..|+.++.+...+
T Consensus 316 ~GDL~v~~~v~~P~~ls~~q~~~ 338 (369)
T PRK14288 316 RGSLIVELQVIYPKSLNKEQQEL 338 (369)
T ss_pred CCCEEEEEEEECCCCCCHHHHHH
Confidence 59999999999998877655443
No 73
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.18 E-value=7.8e-11 Score=108.52 Aligned_cols=86 Identities=8% Similarity=0.067 Sum_probs=74.1
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+.|+|+|+||+++++|||.+|+.|+++.|... +| +.++|+||+|+++|++|+++|+|++.++
T Consensus 258 ~~f~R~G~Dl~~~~~Isl~~Al~G~~~~i~~l----dg-----------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~ 322 (372)
T PRK14300 258 DIYKVDGANLHCKLPISFVNAALGGEIEVPVI----EG-----------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTI 322 (372)
T ss_pred CCeEEecCCEEEEEecCHHHHhCCCEEEEecC----CC-----------CEEEEEECCccCCCcEEEECCCCCCCCCCCC
Confidence 45889999999999999999999999999865 44 3689999999999999999999998754
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLH 237 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~ 237 (261)
+|||||++.|..|..++-+...|+
T Consensus 323 ~GDL~V~~~v~~P~~ls~~qk~~l 346 (372)
T PRK14300 323 RGDMLTHIHVEVPKNLSKRQRELL 346 (372)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHH
Confidence 799999999999987765544333
No 74
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=99.18 E-value=3.1e-11 Score=110.60 Aligned_cols=85 Identities=19% Similarity=0.190 Sum_probs=74.2
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+.|++.|+||++.+.|||.||+.|+++.|... +| .++|.||+|+++|++++++|+|++.++
T Consensus 260 ~~f~r~g~DL~~~~~isl~eAl~G~~~~i~~l----dG------------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~ 323 (354)
T TIGR02349 260 KIFERDGNDLYIEVPISFTQAILGGEIEVPTL----DG------------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNG 323 (354)
T ss_pred cceEEecCCEEEEEEeCHHHHhCCCeEEEecC----Cc------------eEEEEECCcccCCcEEEECCCCcCCCCCCC
Confidence 34888999999999999999999999999865 44 489999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLH 237 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~ 237 (261)
+|||||+|.|..++.+++++.+++
T Consensus 324 ~GDL~i~~~v~~P~~l~~~~~~~l 347 (354)
T TIGR02349 324 RGDLLVTVKVETPKNLSKEQKELL 347 (354)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHH
Confidence 799999999999988877665443
No 75
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.17 E-value=9.3e-11 Score=105.34 Aligned_cols=80 Identities=10% Similarity=0.011 Sum_probs=71.0
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC-CC
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-SS 215 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~G 215 (261)
+-|++.|.||+++++|||.+|+.|+++.|... +| .++|+||+|+.+|++++++|+|.+.++ .|
T Consensus 202 ~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~----~g------------~v~v~ip~g~~~g~~~ri~g~G~p~~~~~G 265 (306)
T PRK10266 202 PLFDIVGQDLEIVVPLAPWEAALGAKVTVPTL----KE------------SILLTIPPGSQAGQRLRVKGKGLVSKKQTG 265 (306)
T ss_pred CCeEEeCCceEEEEecCHHHHhCCCEEEeeCC----Cc------------cEEEEeCCCcCCCCEEEECCCCCCCCCCCC
Confidence 34788999999999999999999999999865 44 479999999999999999999998767 89
Q ss_pred cEEEEEEeccCCCeEEe
Q psy2268 216 EVIVITKDKPHDVFWRE 232 (261)
Q Consensus 216 Dl~v~i~v~~h~~f~R~ 232 (261)
||+|++.|..|+.+.-+
T Consensus 266 dL~v~~~v~~P~~l~~~ 282 (306)
T PRK10266 266 DLYAVLKIVMPPKPDEK 282 (306)
T ss_pred CEEEEEEEECCCCCCHH
Confidence 99999999999876543
No 76
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=2.8e-11 Score=109.60 Aligned_cols=86 Identities=17% Similarity=0.136 Sum_probs=75.5
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|.||+++++|+|.+|++|.+++|++. +| .++|+||||+++|+++||+|+|.+...
T Consensus 257 ~~F~R~g~dL~~~~~Is~~~AalG~~i~vptl----~g------------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~ 320 (371)
T COG0484 257 PIFERDGDDLYCEVPISFTEAALGGEIEVPTL----DG------------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGG 320 (371)
T ss_pred CCeEECCCceEeccccCHHHHhcCCEEEEEec----CC------------CEEEecCCCCccCcEEEEcCCCccccCCCC
Confidence 45889999999999999999999999999976 55 389999999999999999999999755
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHM 238 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~ 238 (261)
.|||||+|.|..+..+..+...|+.
T Consensus 321 ~GDl~v~v~v~~P~~ls~~q~~lL~ 345 (371)
T COG0484 321 RGDLYVRVKVETPKNLSDEQKELLE 345 (371)
T ss_pred cCCEEEEEEEEcCCCCCHHHHHHHH
Confidence 7999999999999887666555544
No 77
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.16 E-value=1.3e-10 Score=107.64 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=71.4
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC--C
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--S 214 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~ 214 (261)
+-|+++|+||+++++|||.||+.|.++.|... +| .++|+||+|+++|++|+|+|+|++... +
T Consensus 286 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~~l----dg------------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~ 349 (392)
T PRK14279 286 KVFGRDGDDLTVTVPVSFTELALGSTLSVPTL----DG------------PVGVKVPAGTADGRILRVRGRGVPKRSGGA 349 (392)
T ss_pred CcceeecCcEEEEEEccHHHHcCCceEEEEcC----Cc------------eEEEEECCCCCCCCEEEECCCCCCCCCCCC
Confidence 34889999999999999999999999998865 44 479999999999999999999998755 7
Q ss_pred CcEEEEEEeccCCCeEEeCCc
Q psy2268 215 SEVIVITKDKPHDVFWREGAD 235 (261)
Q Consensus 215 GDl~v~i~v~~h~~f~R~g~D 235 (261)
|||||+|.|.-++.+..+...
T Consensus 350 GDL~I~~~v~~P~~Ls~~q~~ 370 (392)
T PRK14279 350 GDLLVTVKVAVPPNLDGAAAE 370 (392)
T ss_pred CCEEEEEEEECCCCCCHHHHH
Confidence 999999999988765544433
No 78
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.15 E-value=8e-11 Score=96.95 Aligned_cols=65 Identities=12% Similarity=0.076 Sum_probs=57.0
Q ss_pred CCCCccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCc------hhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 2 GFNYYAVLGLTRG--ASDYDIKMAFRKKAIQYNPERNND------VKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 2 ~~d~y~~Lgv~~~--a~~~eik~ayr~la~~~hPd~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
+.|||++|||++. .+..++++.||+|.+++|||+... ..+.+....||+||.+|+||.+|+.|=-
T Consensus 1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 4799999999985 899999999999999999999754 2345678899999999999999999854
No 79
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.15 E-value=5.2e-11 Score=109.67 Aligned_cols=86 Identities=20% Similarity=0.190 Sum_probs=74.2
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|+||+++++|||.||++|+++.|... +| +.++|+||+|+++|++++++|+|.+..+
T Consensus 263 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl----dG-----------~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~ 327 (372)
T PRK14286 263 ELFERQGNDLILVRKISLAQAILGAEIEVPTI----DG-----------KKAKMKIPEGTESGQVFRLKGHGMPYLGAYG 327 (372)
T ss_pred CCEEEecCCEEEEEEECHHHHhCCCEEEEeCC----CC-----------CEEEEEeCCccCCCcEEEECCCCCCCCCCCC
Confidence 45889999999999999999999999999865 55 3589999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLH 237 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~ 237 (261)
.|||||+|.|.-+..+..+..+|+
T Consensus 328 ~GDL~V~~~V~~P~~Ls~~qk~~l 351 (372)
T PRK14286 328 KGDQHVIVKIEIPKKITRRQRELI 351 (372)
T ss_pred CCcEEEEEEEECCCCCCHHHHHHH
Confidence 799999999999987666555443
No 80
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=1.9e-10 Score=106.45 Aligned_cols=83 Identities=16% Similarity=0.144 Sum_probs=71.5
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC--C
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--S 214 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~ 214 (261)
+-|+|+|+||+++++|||.||+.|++++|... +| +.++|+||+|+++|++|+|+|+|.+..+ +
T Consensus 279 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~I~tl----dG-----------~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~ 343 (389)
T PRK14295 279 PVFGRSGDNLTVTVPVTFPEAALGAEVRVPTL----GG-----------PPVTVKLPPGTPNGRVLRVRGKGAVRKDGTR 343 (389)
T ss_pred CCEEEecCCEEEEEeecHHHHhCCCeEEEECC----CC-----------CEEEEEECCccCCCcEEEECCCCcCCCCCCC
Confidence 34889999999999999999999999999755 45 3589999999999999999999998655 7
Q ss_pred CcEEEEEEeccCCCeEEeCC
Q psy2268 215 SEVIVITKDKPHDVFWREGA 234 (261)
Q Consensus 215 GDl~v~i~v~~h~~f~R~g~ 234 (261)
|||||+|.|.-+..+..+..
T Consensus 344 GDL~i~~~v~~P~~Ls~~qk 363 (389)
T PRK14295 344 GDLLVTVEVAVPKDLSGKAR 363 (389)
T ss_pred CCEEEEEEEECCCCCCHHHH
Confidence 99999999998876554433
No 81
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=1.9e-10 Score=106.25 Aligned_cols=82 Identities=11% Similarity=0.028 Sum_probs=71.2
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|+||+++++|||.||+.|++++|... +| .++|+||+|+++|++++++|+|.+.++
T Consensus 263 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~v~tl----dg------------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~ 326 (380)
T PRK14276 263 KKFERDGSTIYYTLPISFVQAALGDTVEVPTV----HG------------DVELKIPAGTQTGKKFRLRGKGAPKLRGGG 326 (380)
T ss_pred cceeeecceEEEEEecCHHHHhCCCeEEEEcC----CC------------cEEEEECCCCCCCCEEEECCCCcCCCCCCC
Confidence 34889999999999999999999999999865 44 379999999999999999999998754
Q ss_pred CCcEEEEEEeccCCCeEEeCC
Q psy2268 214 SSEVIVITKDKPHDVFWREGA 234 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~ 234 (261)
+|||||+|.|.-+..+..+..
T Consensus 327 ~GDL~V~~~v~~P~~l~~~q~ 347 (380)
T PRK14276 327 NGDQHVTVNIVTPTKLNDAQK 347 (380)
T ss_pred CCCEEEEEEEECCCCCCHHHH
Confidence 799999999998876554443
No 82
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.13 E-value=2.3e-10 Score=105.71 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=68.3
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|++.|+||+++++|||+||+.|+++.|.+. +| +.++|.||+|+++|++|+|+|+|++.++
T Consensus 268 ~~F~r~G~DL~~~~~Isl~eAl~G~~~~i~~l----dG-----------~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~ 332 (382)
T PRK14291 268 PLFERRGDNLYLDVNITVAEAVLGTELEVPLL----DG-----------KKEKVKIPPGTKEGDKIRVPGKGMPRLKGSG 332 (382)
T ss_pred CCeeeecCCeEEEEEeeHHHHhCCCEEEEecC----CC-----------CEEEEEECCccCCCCEEEECCCCCCCCCCCC
Confidence 45889999999999999999999999999875 55 3589999999999999999999998754
Q ss_pred CCcEEEEEEeccCC
Q psy2268 214 SSEVIVITKDKPHD 227 (261)
Q Consensus 214 ~GDl~v~i~v~~h~ 227 (261)
+|||||+|.|.-+.
T Consensus 333 ~GDL~V~~~V~~P~ 346 (382)
T PRK14291 333 YGDLVVRVHIDVPK 346 (382)
T ss_pred CCCEEEEEEEEeCC
Confidence 79999999999885
No 83
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.12 E-value=7.8e-11 Score=108.68 Aligned_cols=82 Identities=10% Similarity=0.069 Sum_probs=70.8
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|+|+||++++.|||.||+.|+++.|... +| .++|.||+|+++|++++|+|+|.+..+
T Consensus 260 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl----dg------------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~ 323 (376)
T PRK14280 260 EFFERDGDDIYCEMPLTFAQAALGDEIEVPTL----HG------------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYG 323 (376)
T ss_pred CCeEEecCCEEEEEecCHHHHhCCCEEEEecC----Cc------------eEEEEECCCCCCCcEEEEcCCCCCCCCCCC
Confidence 35889999999999999999999999999865 44 379999999999999999999998653
Q ss_pred CCcEEEEEEeccCCCeEEeCC
Q psy2268 214 SSEVIVITKDKPHDVFWREGA 234 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~ 234 (261)
+|||||+|.|..+..++.+..
T Consensus 324 ~GDL~v~~~v~~P~~Ls~~q~ 344 (376)
T PRK14280 324 QGDQYVVVRVVTPTKLTDRQK 344 (376)
T ss_pred CCCEEEEEEEECCCCCCHHHH
Confidence 799999999998876654443
No 84
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.12 E-value=6e-11 Score=109.39 Aligned_cols=87 Identities=15% Similarity=0.117 Sum_probs=77.0
Q ss_pred ccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC----
Q psy2268 138 DITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---- 213 (261)
Q Consensus 138 d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---- 213 (261)
.|.++++|++++++|||.||+.|+++.|... +| .++|.||+|+++|++++|+|+|.+.++
T Consensus 261 ~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l----dG------------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~ 324 (374)
T PRK14293 261 EFRRDGINILSEIKISYLQAILGDTLEVDTV----DG------------PVELTIPAGTQPNTVLTLENKGVPRLGNPVA 324 (374)
T ss_pred ccChhhhceEEEeccCHHHHhCCCEEEecCC----CC------------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCC
Confidence 4778899999999999999999999999876 55 268999999999999999999998644
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEEEEe
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLHMKK 240 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~~~~ 240 (261)
.|||||++.|..|+.+++++.+|+..+
T Consensus 325 ~GDL~v~~~v~~P~~l~~~~~~l~~~l 351 (374)
T PRK14293 325 RGDHLITVKVKIPTRISDEERELLEKL 351 (374)
T ss_pred cCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 699999999999999999888776654
No 85
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.11 E-value=2.5e-10 Score=105.96 Aligned_cols=83 Identities=13% Similarity=0.145 Sum_probs=71.6
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|+||+++++|||.||+.|++++|... +| .++|+||+|+++|++++|+|+|.+..+
T Consensus 279 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl----dg------------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~ 342 (397)
T PRK14281 279 ELFVRNGDDVIYNLAVSYPDLVLGTKVEVPTL----DG------------AVKLTIPAGTQPETMLRIPGKGIGHLRGSG 342 (397)
T ss_pred CCeEEecCCEEEEEEecHHHHhcCCeEEeecC----Cc------------cEEEEeCCccCCCcEEEEcCCCCCCCCCCC
Confidence 45889999999999999999999999999865 44 379999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCc
Q psy2268 214 SSEVIVITKDKPHDVFWREGAD 235 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~D 235 (261)
.|||||+|.|.-+..+..+...
T Consensus 343 ~GDL~V~~~V~~P~~Ls~~qk~ 364 (397)
T PRK14281 343 RGDQYVRVNVFVPKEVSHQDKE 364 (397)
T ss_pred CCCEEEEEEEEcCCCCCHHHHH
Confidence 7999999999988766554433
No 86
>KOG1150|consensus
Probab=99.09 E-value=1.2e-10 Score=95.77 Aligned_cols=63 Identities=29% Similarity=0.492 Sum_probs=57.8
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhh
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIY 64 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~Y 64 (261)
+.|+|+||.|.+..+.++||+.||+|++..|||+|++ +.|...|.-|.+||..|-|+..|..-
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr~ 116 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKRC 116 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 6799999999999999999999999999999999997 78999999999999999998755443
No 87
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.08 E-value=3.6e-10 Score=104.43 Aligned_cols=82 Identities=11% Similarity=0.037 Sum_probs=70.8
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+.|+|.|+||+++++|||.||+.|++++|... +| .++|.||+|+++|++++|+|+|.+..+
T Consensus 265 ~~f~R~G~DL~~~~~Isl~eAl~G~~~~i~~l----dg------------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~ 328 (380)
T PRK14297 265 KTFKRKGFDIYIDKHISFAKAALGTEIKVPTV----DG------------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTG 328 (380)
T ss_pred CCEEEeCCCEEEEEEeCHHHHhCCCcEEEEcC----CC------------cEEEEECCCcCCCCEEEEcCCCcCCCCCCC
Confidence 34778999999999999999999999999865 44 379999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCC
Q psy2268 214 SSEVIVITKDKPHDVFWREGA 234 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~ 234 (261)
+|||||+|.|.-+..+..+..
T Consensus 329 ~GDL~v~~~v~~P~~ls~~q~ 349 (380)
T PRK14297 329 RGNQYVTVIVDIPKKLNSKQK 349 (380)
T ss_pred CCcEEEEEEEEcCCCCCHHHH
Confidence 799999999998876654443
No 88
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.08 E-value=1.4e-10 Score=106.96 Aligned_cols=85 Identities=13% Similarity=0.065 Sum_probs=71.9
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|+|+||+++++|||.||+.|+++.|... ++ ..++|.||+|+++|++++|+|+|.+..+
T Consensus 256 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl----d~-----------~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~ 320 (378)
T PRK14278 256 DVFVRDGDDLHCTVSVPMVDAALGTTVTVEAI----LD-----------GPSEITIPPGTQPGSVITLRGRGMPHLRSGG 320 (378)
T ss_pred CCEEEcCCCEEEEEecCHHHHhcCCeEEEecC----CC-----------CeEEEEeCCCcCCCcEEEECCCCCCCCCCCC
Confidence 45889999999999999999999999998843 22 3589999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADL 236 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL 236 (261)
+|||||+|.|.-+..+..+...|
T Consensus 321 ~GDL~V~~~V~~P~~Ls~~qk~~ 343 (378)
T PRK14278 321 RGDLHAHVEVVVPTRLDHEDIEL 343 (378)
T ss_pred CCCEEEEEEEEcCCCCCHHHHHH
Confidence 79999999999887665544433
No 89
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.07 E-value=1.3e-10 Score=107.14 Aligned_cols=85 Identities=11% Similarity=0.117 Sum_probs=73.2
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+.|.+.|+||+..++|||.||+.|+++.|... +| ..+|.||+|+++|++++|+|+|++.++
T Consensus 255 ~~f~r~g~dL~~~~~isl~eAl~G~~~~i~tl----dG------------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~ 318 (371)
T PRK14292 255 PELRREQEHLIYEARIGFAKAALGGQITVPTL----DG------------PQVIEVKPGTQHGDLHRLRGQGMPRLQGAG 318 (371)
T ss_pred CccccchhceeEEeccCHHHHhCCCeEEEECC----CC------------CEEEecCCCcCCCcEEEECCCCCCCCCCCC
Confidence 34888999999999999999999999999865 45 237999999999999999999998754
Q ss_pred CCcEEEEEEeccCCCeEEeCCcEE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADLH 237 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL~ 237 (261)
+|||||++.|..|+.++.+...|+
T Consensus 319 ~GDL~V~~~v~~P~~l~~~q~~ll 342 (371)
T PRK14292 319 TGDLIVEYEIAVPKQLSPEAREAL 342 (371)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHH
Confidence 799999999999988776554444
No 90
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.07 E-value=2.1e-10 Score=93.17 Aligned_cols=53 Identities=19% Similarity=0.326 Sum_probs=46.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCc------hhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 15 ASDYDIKMAFRKKAIQYNPERNND------VKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 15 a~~~eik~ayr~la~~~hPd~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+..+|+++||+|++++|||+.+. ..+.+.|..||+||++|+||.+|+.|+--
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~ 61 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLS 61 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHH
Confidence 467899999999999999998643 23678899999999999999999999973
No 91
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.07 E-value=1.8e-10 Score=106.69 Aligned_cols=84 Identities=12% Similarity=0.064 Sum_probs=71.6
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|+|.|+||+++++|||.||++|+++.|... +| .++|.||+|+++|++++|+|+|.+..+
T Consensus 272 ~~F~R~G~DL~~~~~Isl~eAl~G~~~~i~tl----dG------------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~ 335 (386)
T PRK14277 272 PLFKREGYNVYLEMPITFTDAALGGEIEIPTL----DG------------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRG 335 (386)
T ss_pred CCeEEecCCEEEEEEcCHHHHhCCCEEEEEcC----CC------------CEEEEECCCCCCCCEEEECCCCCCCCCCCC
Confidence 44889999999999999999999999999865 55 379999999999999999999998654
Q ss_pred CCcEEEEEEeccCCCeEEeCCcE
Q psy2268 214 SSEVIVITKDKPHDVFWREGADL 236 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~DL 236 (261)
.|||||+|.|.-+..++.+..++
T Consensus 336 ~GDL~v~~~V~~P~~Ls~~qk~~ 358 (386)
T PRK14277 336 RGDQIVKVYIEVPKKLTEKQKEL 358 (386)
T ss_pred CCCEEEEEEEEeCCCCCHHHHHH
Confidence 79999999999887655444333
No 92
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.05 E-value=2.4e-10 Score=105.26 Aligned_cols=83 Identities=11% Similarity=0.111 Sum_probs=70.1
Q ss_pred CccccC-CCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCC---
Q psy2268 137 QDITLS-SNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYS--- 212 (261)
Q Consensus 137 ~d~~~~-g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~--- 212 (261)
+-|+|. |+||+++++|||.||++|+++.|+.. +| .++|+||+|+++|++++|+|+|.+..
T Consensus 266 ~~F~R~~G~DL~~~~~Isl~eAllG~~~~i~tl----dG------------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~ 329 (372)
T PRK14296 266 KVFEIINNNDILMTYNISYLDAILGNEIIIKTL----DG------------DIKYKLPKSINSNELIIINNKGLYKSINK 329 (372)
T ss_pred CCEEEeCCCcEEEEEecCHHHHhCCCEEEeeCC----CC------------CEEEEECCccCCCcEEEEcCCCCCcCCCC
Confidence 347784 89999999999999999999999866 55 27999999999999999999999733
Q ss_pred C-CCcEEEEEEeccCCCeEEeCCc
Q psy2268 213 T-SSEVIVITKDKPHDVFWREGAD 235 (261)
Q Consensus 213 ~-~GDl~v~i~v~~h~~f~R~g~D 235 (261)
+ .|||||++.|.-+..+..+...
T Consensus 330 ~~~GDL~V~~~V~~P~~Ls~~q~~ 353 (372)
T PRK14296 330 DKRGDLIIKVNIVVPKNLSKKEKE 353 (372)
T ss_pred CCcCCEEEEEEEECCCCCCHHHHH
Confidence 2 7999999999988766544433
No 93
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=3.8e-10 Score=104.25 Aligned_cols=83 Identities=13% Similarity=0.055 Sum_probs=70.6
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--- 213 (261)
+-|++.|+||++++.|||.+|+.|+++.|... +| .++|.||+|+++|++++|+|+|.+...
T Consensus 263 ~~f~r~G~DL~~~~~Isl~eAl~G~~~~i~tl----dG------------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~ 326 (378)
T PRK14283 263 KIFRREGANLYYEKPISFVQAALGDTVDVPTI----DG------------PVELKIPAGTQSGTTFRLKGHGMPSLRWSG 326 (378)
T ss_pred CCEEEecCCEEEEEecCHHHHhcCCeEEEEcC----Cc------------eEEEEeCCCCCCCCEEEECCCCCCCCCCCC
Confidence 34778999999999999999999999999854 44 479999999999999999999998653
Q ss_pred CCcEEEEEEeccCCCeEEeCCc
Q psy2268 214 SSEVIVITKDKPHDVFWREGAD 235 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~g~D 235 (261)
+|||||+|.|.-++.++.+...
T Consensus 327 ~GdL~v~~~v~~P~~l~~~q~~ 348 (378)
T PRK14283 327 KGNLYVKVKVVVPKKLSPKQKE 348 (378)
T ss_pred CCCEEEEEEEEeCCCCCHHHHH
Confidence 7999999999987665544433
No 94
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.01 E-value=1e-09 Score=102.34 Aligned_cols=82 Identities=17% Similarity=0.109 Sum_probs=70.6
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCC--CCCCCEEEecCCCCCCCC-
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPG--LPEHTVFKFPKEPLEYST- 213 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~- 213 (261)
+-|+|+|+||+++++|||.||++|+++.|... +|. .++|+||+| +++|++++|+|+|.+..+
T Consensus 267 ~~F~R~G~DL~~~~~Isl~eAllG~~i~I~tL----dG~-----------~l~I~ip~g~vt~pg~~~~I~geGmP~~~~ 331 (421)
T PTZ00037 267 DTFKREGGDLFITKKISLYEALTGFVFYITHL----DGR-----------KLLVNTPPGEVVKPGDIKVINNEGMPTYKS 331 (421)
T ss_pred CCcEEeCCeEEEEEeCCHHHHhcCCEEEeeCC----CCC-----------eEEEEeCCCcccCCCcEEEeCCCCcccCCC
Confidence 45889999999999999999999999999866 662 589999999 999999999999998533
Q ss_pred ---CCcEEEEEEeccC--CCeEEeC
Q psy2268 214 ---SSEVIVITKDKPH--DVFWREG 233 (261)
Q Consensus 214 ---~GDl~v~i~v~~h--~~f~R~g 233 (261)
.|||||++.|.-+ ..++.+.
T Consensus 332 ~~~rGDL~V~~~V~~P~~~~Ls~~q 356 (421)
T PTZ00037 332 PFKKGNLYVTFEVIFPVDRKFTNEE 356 (421)
T ss_pred CCCCCCEEEEEEEEcCCCCCCCHHH
Confidence 6999999999988 6555443
No 95
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.98 E-value=6.1e-10 Score=103.12 Aligned_cols=79 Identities=14% Similarity=0.200 Sum_probs=69.1
Q ss_pred ccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---C
Q psy2268 138 DITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---S 214 (261)
Q Consensus 138 d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~ 214 (261)
.|.++++||++++.|||.+|+.|+++.|... +| .++|.||+|+++|++++++|+|.+.++ +
T Consensus 272 ~f~r~g~DL~~~~~Isl~eAl~G~~~~i~~l----dg------------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~ 335 (386)
T PRK14289 272 ELIRDENDLIYNLLLSVPTAALGGAVEVPTI----DG------------KAKVKIEAGTQPGKVLRLRNKGLPSVNGYGT 335 (386)
T ss_pred cccccccceeEEeccCHHHHhCCCeEEeecC----Cc------------eEEEEECCccCCCcEEEECCCCcCCCCCCCC
Confidence 4778899999999999999999999999865 44 479999999999999999999998754 7
Q ss_pred CcEEEEEEeccCCCeEEe
Q psy2268 215 SEVIVITKDKPHDVFWRE 232 (261)
Q Consensus 215 GDl~v~i~v~~h~~f~R~ 232 (261)
|||||+|.|+-+..+..+
T Consensus 336 GDL~v~~~v~~P~~l~~~ 353 (386)
T PRK14289 336 GDLLVNVSVYIPETLSKE 353 (386)
T ss_pred CcEEEEEEEEeCCCCCHH
Confidence 999999999987655443
No 96
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=4.8e-10 Score=96.25 Aligned_cols=67 Identities=33% Similarity=0.494 Sum_probs=60.1
Q ss_pred CCCccccCCCC---CCCHHHHHHHHHHHHHHhCCCCCCc---hhHHHHHHHHHHHHhhcchhhhhhhhhhccc
Q psy2268 3 FNYYAVLGLTR---GASDYDIKMAFRKKAIQYNPERNND---VKSQAMFTLICEAYEVLSDKFRKAIYDQYGE 69 (261)
Q Consensus 3 ~d~y~~Lgv~~---~a~~~eik~ayr~la~~~hPd~~~~---~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~ 69 (261)
.|+|.+|||+. .|++.+|.+|+++...+||||+... .+..+.|+.|+.||+||+|+.+|.+||..-.
T Consensus 43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df 115 (379)
T COG5269 43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF 115 (379)
T ss_pred hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence 58999999997 6889999999999999999999843 4677899999999999999999999998543
No 97
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.92 E-value=3.3e-09 Score=102.93 Aligned_cols=69 Identities=43% Similarity=0.755 Sum_probs=65.1
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchh
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEEN 71 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~ 71 (261)
+|||+||||+++|+.++||+|||+||++||||+++.+.+.++|++|++||++|+||.+|+.||+||..+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 699999999999999999999999999999999988888899999999999999999999999886543
No 98
>KOG0568|consensus
Probab=98.46 E-value=1.7e-07 Score=79.00 Aligned_cols=55 Identities=31% Similarity=0.537 Sum_probs=50.5
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHh-hcchh
Q psy2268 4 NYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYE-VLSDK 58 (261)
Q Consensus 4 d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~-~L~d~ 58 (261)
.||++|||..+|+..|++.||..||+++|||...+....+.|.+|.+||. ||+..
T Consensus 48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~~ 103 (342)
T KOG0568|consen 48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQEK 103 (342)
T ss_pred HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999987667799999999998 78753
No 99
>KOG1789|consensus
Probab=98.39 E-value=3.4e-07 Score=91.13 Aligned_cols=52 Identities=27% Similarity=0.453 Sum_probs=44.0
Q ss_pred CCccccCCCCC----CCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcch
Q psy2268 4 NYYAVLGLTRG----ASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSD 57 (261)
Q Consensus 4 d~y~~Lgv~~~----a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d 57 (261)
+-|+||.|+-+ -..+.||++|+|||.+||||||| +-.++|.++|+|||.|+.
T Consensus 1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNP--EGRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNP--EGREMFERVNKAYELLSS 1337 (2235)
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHH
Confidence 36899998752 23478999999999999999996 455999999999999983
No 100
>KOG0723|consensus
Probab=98.21 E-value=2.4e-06 Score=63.62 Aligned_cols=49 Identities=27% Similarity=0.380 Sum_probs=42.7
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchh
Q psy2268 7 AVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDK 58 (261)
Q Consensus 7 ~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~ 58 (261)
.||||+++++.+.||+|+|++....|||+...|- .=.+||||+++|...
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSPY---lAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSPY---LASKINEAKDLLEGT 108 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCHH---HHHHHHHHHHHHhcc
Confidence 3799999999999999999999999999998763 334699999999743
No 101
>KOG0712|consensus
Probab=97.62 E-value=0.00017 Score=65.03 Aligned_cols=77 Identities=13% Similarity=0.192 Sum_probs=67.1
Q ss_pred CCccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCC--CCCCCEEEecCCCCCCCC
Q psy2268 136 KQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPG--LPEHTVFKFPKEPLEYST 213 (261)
Q Consensus 136 ~~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~ 213 (261)
.+-|.+.+.|+...+.|+|.|+..|..+.+... +| +.+++.++|| +.+|++.+++|+|++..+
T Consensus 244 h~~F~Rrg~dL~~~~~i~l~eal~G~~~~~~~l----dG-----------r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~ 308 (337)
T KOG0712|consen 244 HPGFDRRGSDLYRKLTISLVEALCGFQRVWETL----DG-----------RLLKLSSKPGEVISPGDTKRVEGEGMPIFR 308 (337)
T ss_pred cccceecccccceeeecchhhccccceEEEEcc----CC-----------ceEEEecCCCceeChhHEEeecCCCccccc
Confidence 344778899999999999999999988888743 55 3689999999 899999999999999766
Q ss_pred --CCcEEEEEEeccCC
Q psy2268 214 --SSEVIVITKDKPHD 227 (261)
Q Consensus 214 --~GDl~v~i~v~~h~ 227 (261)
.|||||.+.|+-++
T Consensus 309 ~~~g~lyi~~~v~fp~ 324 (337)
T KOG0712|consen 309 NPKGDLYIKFEVKFPK 324 (337)
T ss_pred CCCCcEEEEEEEEcCC
Confidence 89999999998776
No 102
>KOG3192|consensus
Probab=97.24 E-value=0.00036 Score=55.70 Aligned_cols=64 Identities=16% Similarity=0.303 Sum_probs=50.6
Q ss_pred CCCccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCCc------hhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 3 FNYYAVLGLTR--GASDYDIKMAFRKKAIQYNPERNND------VKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 3 ~d~y~~Lgv~~--~a~~~eik~ayr~la~~~hPd~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+||.++|... ...+..++.-|.-..+++|||+... ..|.+...++++||..|.||-+|+.|=.
T Consensus 8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 46888886544 4556666668888899999999432 3577889999999999999999999954
No 103
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=97.09 E-value=0.00026 Score=50.95 Aligned_cols=26 Identities=15% Similarity=0.045 Sum_probs=22.7
Q ss_pred cEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 235 DLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 235 DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
||+++++|||+||++|+.++|+||..
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g 26 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDG 26 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCC
Confidence 89999999999999999999999864
No 104
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.94 E-value=0.0065 Score=50.19 Aligned_cols=63 Identities=24% Similarity=0.374 Sum_probs=48.7
Q ss_pred CCccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCc------hhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 4 NYYAVLGLTRGA--SDYDIKMAFRKKAIQYNPERNND------VKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 4 d~y~~Lgv~~~a--~~~eik~ayr~la~~~hPd~~~~------~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
|++...+..+.+ ..+.++..|+.+.+.+|||+... ..+.+.+..++.||.+|.+|-+|+.|=.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 445555555544 34558899999999999999764 1345678999999999999999999854
No 105
>KOG0431|consensus
Probab=95.12 E-value=0.027 Score=53.36 Aligned_cols=43 Identities=23% Similarity=0.415 Sum_probs=31.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCch--------hHHHHHHHHHHHHh
Q psy2268 11 LTRGASDYDIKMAFRKKAIQYNPERNNDV--------KSQAMFTLICEAYE 53 (261)
Q Consensus 11 v~~~a~~~eik~ayr~la~~~hPd~~~~~--------~a~~~f~~i~~Ay~ 53 (261)
+..=.+.++|||||||..+..||||-+-. -|++.|..+++|++
T Consensus 396 ltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn 446 (453)
T KOG0431|consen 396 LTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWN 446 (453)
T ss_pred hhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 33446899999999999999999997642 23445555555554
No 106
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=93.27 E-value=0.043 Score=45.31 Aligned_cols=35 Identities=29% Similarity=0.366 Sum_probs=32.5
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN 37 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~ 37 (261)
.+.|++|++...+...+|+++||++....|||+-.
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~ 147 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAA 147 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHH
Confidence 47899999999999999999999999999999844
No 107
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=93.08 E-value=0.21 Score=39.04 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=35.5
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhh
Q psy2268 6 YAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKF 59 (261)
Q Consensus 6 y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~ 59 (261)
..||+|++..+.++|.+.|.+|-...+|++.... -.=.+|..|.|.|..+.
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGSf---YLQSKV~rAKErl~~El 111 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGSF---YLQSKVFRAKERLEQEL 111 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS-H---HHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCCH---HHHHHHHHHHHHHHHHH
Confidence 4699999999999999999999999999987643 22235777888776544
No 108
>PF13446 RPT: A repeated domain in UCH-protein
Probab=86.79 E-value=1.7 Score=29.27 Aligned_cols=25 Identities=32% Similarity=0.442 Sum_probs=22.9
Q ss_pred CccccCCCCCCCHHHHHHHHHHHHH
Q psy2268 5 YYAVLGLTRGASDYDIKMAFRKKAI 29 (261)
Q Consensus 5 ~y~~Lgv~~~a~~~eik~ayr~la~ 29 (261)
-|+.|||+++++++.|-.+|+....
T Consensus 7 Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 7 AYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999998766
No 109
>KOG0724|consensus
Probab=86.34 E-value=0.75 Score=41.78 Aligned_cols=53 Identities=25% Similarity=0.414 Sum_probs=42.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCC-----chhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 14 GASDYDIKMAFRKKAIQYNPERNN-----DVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 14 ~a~~~eik~ayr~la~~~hPd~~~-----~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.++..+|+.+|+..++..||++-. .-...+.|++|.+||++|++..+|...|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~ 60 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS 60 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence 367789999999999999999874 12556789999999999998655545444
No 110
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=84.82 E-value=1.8 Score=36.31 Aligned_cols=38 Identities=24% Similarity=0.222 Sum_probs=29.3
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcc
Q psy2268 12 TRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLS 56 (261)
Q Consensus 12 ~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~ 56 (261)
+++||.+||.+|+.++..+|--|. +.-.+|..||+.+-
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd~-------~~~~~IEaAYD~IL 38 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGDE-------KSREAIEAAYDAIL 38 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCCH-------HHHHHHHHHHHHHH
Confidence 579999999999999999883332 44556888998543
No 111
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=83.42 E-value=4.5 Score=28.38 Aligned_cols=46 Identities=11% Similarity=0.097 Sum_probs=34.7
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHH
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFT 46 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~ 46 (261)
|-+|--++.++++-|++.||+.|-++..+|+.=-..|....++.|.
T Consensus 1 MCRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS~~n~~AFe 46 (88)
T COG5552 1 MCRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPSAANAEAFE 46 (88)
T ss_pred CccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcchhhHHHHH
Confidence 5567778899999999999999999888887655555433345554
No 112
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=73.15 E-value=19 Score=25.39 Aligned_cols=46 Identities=17% Similarity=0.127 Sum_probs=34.5
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHH
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFT 46 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~ 46 (261)
|=+|--.+-++.+.|+++||..|-.+..+|..=-..|.....+.|.
T Consensus 1 MCRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~an~eaF~ 46 (78)
T PF10041_consen 1 MCRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSAANAEAFD 46 (78)
T ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcchhhHHHHH
Confidence 4455556778999999999999999999998766666544445553
No 113
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=65.29 E-value=14 Score=28.10 Aligned_cols=44 Identities=18% Similarity=0.259 Sum_probs=31.1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCc-hh----HHHHHHHHHHHHhhcc
Q psy2268 13 RGASDYDIKMAFRKKAIQYNPERNND-VK----SQAMFTLICEAYEVLS 56 (261)
Q Consensus 13 ~~a~~~eik~ayr~la~~~hPd~~~~-~~----a~~~f~~i~~Ay~~L~ 56 (261)
+..+..++++|.|..-++.|||.-.. |. .++-++.++.-.+.|.
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~ 52 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLK 52 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHh
Confidence 45677899999999999999997543 32 2344666666555554
No 114
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=58.33 E-value=6.1 Score=18.44 Aligned_cols=13 Identities=46% Similarity=0.593 Sum_probs=9.7
Q ss_pred HHHHHHHHHhhcc
Q psy2268 44 MFTLICEAYEVLS 56 (261)
Q Consensus 44 ~f~~i~~Ay~~L~ 56 (261)
.|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4777888888774
No 115
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=55.23 E-value=17 Score=27.99 Aligned_cols=38 Identities=11% Similarity=0.115 Sum_probs=25.1
Q ss_pred EEEecCCCCCCCEEEecCCCCCCCC---------CCcEEEEEEeccC
Q psy2268 189 HIKIKPGLPEHTVFKFPKEPLEYST---------SSEVIVITKDKPH 226 (261)
Q Consensus 189 ~V~Ip~G~~~G~~i~~~g~G~~~~~---------~GDl~v~i~v~~h 226 (261)
+..||.|+.+|+.|++.|.-...++ .+|+.+++++..+
T Consensus 2 ~~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~ 48 (128)
T smart00276 2 TLPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFN 48 (128)
T ss_pred cccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCC
Confidence 3567888888888888886554332 2466666665554
No 116
>PF09285 Elong-fact-P_C: Elongation factor P, C-terminal; InterPro: IPR015365 These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology []. ; GO: 0043043 peptide biosynthetic process, 0005737 cytoplasm; PDB: 1YBY_A 3OYY_B 1UEB_B 3HUW_V 3HUY_V 3A5Z_H.
Probab=46.13 E-value=32 Score=22.82 Aligned_cols=20 Identities=15% Similarity=0.134 Sum_probs=14.0
Q ss_pred EEEEecCCCCCCCEEEecCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKE 207 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~ 207 (261)
+.|.||+=++.|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~VdT~ 49 (56)
T PF09285_consen 30 AEIQVPLFIEEGDKIKVDTR 49 (56)
T ss_dssp -EEEEETT--TT-EEEEETT
T ss_pred CEEEccceecCCCEEEEECC
Confidence 68999999999999998653
No 117
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=44.61 E-value=47 Score=24.64 Aligned_cols=52 Identities=15% Similarity=0.337 Sum_probs=31.1
Q ss_pred CCCCCCC-HHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhh-hccc
Q psy2268 10 GLTRGAS-DYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYD-QYGE 69 (261)
Q Consensus 10 gv~~~a~-~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD-~~G~ 69 (261)
|++++.. -.+|-+.++.+...+++. ..+.+..+.+.| +.||.-+..|| .++.
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~~------~~~~~~~l~~~y--~~~~~~~~~~~~~~~~ 104 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTGG------DPELLRGLAQMY--VEDPRFAAMYDKKFGP 104 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS---------HHHHHHHHHHT--TSTHHHHHHHG-GGST
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhCC------CHHHHHHHHHHH--HcCHHHHhhccccCCH
Confidence 4455443 334666666666666661 226777788888 77888888888 5554
No 118
>smart00841 Elong-fact-P_C Elongation factor P, C-terminal. These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology PUBMED:15210970.
Probab=43.70 E-value=32 Score=22.82 Aligned_cols=20 Identities=10% Similarity=0.072 Sum_probs=17.4
Q ss_pred EEEEecCCCCCCCEEEecCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKE 207 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~ 207 (261)
++|.||.=++.|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T smart00841 30 AVVQVPLFINEGDKIKVDTR 49 (56)
T ss_pred CEEEcCCcccCCCEEEEECC
Confidence 68999999999999988653
No 119
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=42.88 E-value=36 Score=19.05 Aligned_cols=17 Identities=24% Similarity=0.499 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHhCC
Q psy2268 17 DYDIKMAFRKKAIQYNP 33 (261)
Q Consensus 17 ~~eik~ayr~la~~~hP 33 (261)
.++.+.+-|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 46788899999999984
No 120
>PF04620 FlaA: Flagellar filament outer layer protein Flaa; InterPro: IPR006714 Periplasmic flagella are the organelles of spirochete mobility, and are structurally different from the flagella of other motile bacteria. They reside inside the cell within the periplasmic space, and confer mobility in viscous gel-like media such as connective tissue []. The flagella are composed of an outer sheath of FlaA proteins and a core filament of FlaB proteins. Each species usually has several FlaA protein species [].; GO: 0001539 ciliary or flagellar motility, 0030288 outer membrane-bounded periplasmic space
Probab=41.18 E-value=1.5e+02 Score=25.29 Aligned_cols=42 Identities=14% Similarity=0.081 Sum_probs=25.0
Q ss_pred EEEEEEecCCCCCCCEEEecCCCCCCCC-CCcEEEEEEeccCC
Q psy2268 186 KIVHIKIKPGLPEHTVFKFPKEPLEYST-SSEVIVITKDKPHD 227 (261)
Q Consensus 186 ~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~GDl~v~i~v~~h~ 227 (261)
+.|++.||+.+.++..=.+.....-... ++=-++-+++..+|
T Consensus 148 K~L~~~iP~~ip~~r~r~~q~~~~yp~~~~~l~f~gfrI~~dp 190 (217)
T PF04620_consen 148 KNLTVNIPPYIPDVRNRILQQYPRYPRSDPGLKFVGFRIDRDP 190 (217)
T ss_pred eEEEEECCCCCCccceeeeeecccCCCCCCceEEEEEEEECCh
Confidence 5799999999997765555533221111 33445556666555
No 121
>PF01846 FF: FF domain; InterPro: IPR002713 The FF domain may be involved in protein-protein interaction []. It often occurs as multiple copies and often accompanies WW domains IPR001202 from INTERPRO. PRP40 from yeast encodes a novel, essential splicing component that associates with the yeast U1 small nuclear ribonucleoprotein particle [].; PDB: 3HFH_B 2KIS_A 2DOD_A 2JUC_A 2LKS_A 1UZC_A 2KZG_A 2L9V_A 2DOF_A 2KFD_A ....
Probab=41.05 E-value=67 Score=20.14 Aligned_cols=46 Identities=13% Similarity=0.283 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhCCCCCCc---hhHHHHHHHHHHHHhhc--chhhhhhhhhhc
Q psy2268 19 DIKMAFRKKAIQYNPERNND---VKSQAMFTLICEAYEVL--SDKFRKAIYDQY 67 (261)
Q Consensus 19 eik~ayr~la~~~hPd~~~~---~~a~~~f~~i~~Ay~~L--~d~~~r~~YD~~ 67 (261)
+.+.+|++|...+. .++. ..+...+. -...|..| ++..++.+|+.|
T Consensus 1 ~a~~~F~~lL~e~~--i~~~s~W~~~~~~l~-~dpry~~i~~~~~~R~~lF~ey 51 (51)
T PF01846_consen 1 KAREAFKELLKEHK--ITPYSSWEEVKPKLS-KDPRYKAIGDSESERESLFEEY 51 (51)
T ss_dssp HHHHHHHHHHHHTT--S-TTSSHHHHHHHHT-TSCHHHHSTSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCC--CCCCCcHHHHHHHHc-cCHHHHHhcCCHHHHHHHHHhC
Confidence 46889998888765 4443 22222221 11255555 555566666543
No 122
>cd05794 S1_EF-P_repeat_2 S1_EF-P_repeat_2: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-tRNA and puromycine in vitro. EF-P binds to both the 30S and 50S ribosomal subunits. EF-P binds near the streptomycine binding site of the 16S rRNA in the 30S subunit. EF-P interacts with domains 2 and 5 of the 23S rRNA. The L16 ribosomal protein of the 50S or its N-terminal fragment are required for EF-P mediated peptide bond synthesis, whereas L11, L15, and L7/L12 are not required in this reaction, suggesting that EF-P may function at a different ribosomal site than most other translation factors. EF-P is essential for cell viability and is required for protein synthesis. EF-P is mainly present in bacteria. The EF-P homologs in archaea and eukaryotes are the initiation factors aIF5A and eIF5A, respectively. EF-P
Probab=39.19 E-value=40 Score=22.34 Aligned_cols=20 Identities=10% Similarity=0.115 Sum_probs=17.6
Q ss_pred EEEEecCCCCCCCEEEecCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKE 207 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~ 207 (261)
+.|.||.=++.|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T cd05794 30 AEVQVPLFIKEGEKIKVDTR 49 (56)
T ss_pred CEEEcCCeecCCCEEEEECC
Confidence 68999999999999998764
No 123
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=36.94 E-value=1.2e+02 Score=19.58 Aligned_cols=43 Identities=16% Similarity=0.217 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+++..+..||+.+ ..+..+.+.+.|..|++..+....+..
T Consensus 12 ~~~~~~~~~~~~~~~~----~~~i~~~~~~~W~~l~~~~k~~y~~~a 54 (66)
T cd00084 12 SQEHRAEVKAENPGLS----VGEISKILGEMWKSLSEEEKKKYEEKA 54 (66)
T ss_pred HHHHHHHHHHHCcCCC----HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4556677777888854 346778899999999987776655553
No 124
>cd00070 GLECT Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation.
Probab=36.71 E-value=58 Score=24.88 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=27.2
Q ss_pred EEEecCCCCCCCEEEecCCCCCCCC---------CCcEEEEEEeccCC
Q psy2268 189 HIKIKPGLPEHTVFKFPKEPLEYST---------SSEVIVITKDKPHD 227 (261)
Q Consensus 189 ~V~Ip~G~~~G~~i~~~g~G~~~~~---------~GDl~v~i~v~~h~ 227 (261)
...||.|+..|++|++.|.-...+. .+|+.+++++..+.
T Consensus 3 ~~~l~~~l~~G~~i~i~G~~~~~~~~f~Inl~~~~~~i~lH~n~rf~~ 50 (127)
T cd00070 3 KLPLPGGLKPGSTLTVKGRVLPNAKRFSINLGTGSSDIALHFNPRFDE 50 (127)
T ss_pred ccccCCCCcCCCEEEEEEEECCCCCEEEEEEecCCCCEEEEEeeeCCC
Confidence 4567788999999999987665433 23777777766553
No 125
>KOG0713|consensus
Probab=35.20 E-value=3.8 Score=37.15 Aligned_cols=80 Identities=13% Similarity=-0.002 Sum_probs=63.0
Q ss_pred ccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC----
Q psy2268 138 DITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---- 213 (261)
Q Consensus 138 d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---- 213 (261)
-|.+++.+++..+.+++++++.|..+++.-. ++ ..+.+.-..+..++.+++..++|++...
T Consensus 245 ~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~----d~-----------~~~~~~r~~~~~p~~~~~~~~~~~~~l~~~~~ 309 (336)
T KOG0713|consen 245 RFERKGDDLYTNVTISLEAALVGFEMEILHL----DG-----------HYVEVSRKKITWPGARTRKKGEGMPLLKNRNE 309 (336)
T ss_pred ceecCccchhhHHHHHHHHHHHHHHHHhhcc----ch-----------hhhhhhhhhccccchhhhhhhccchhhhccch
Confidence 3567788899999999999999998888754 33 3456666777888999999999998543
Q ss_pred CCcEEEEEEeccCCCeEEe
Q psy2268 214 SSEVIVITKDKPHDVFWRE 232 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~f~R~ 232 (261)
.+.+++++.+..|..+.++
T Consensus 310 ~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 310 KGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred hcceeEEecccCcccccch
Confidence 7999999999888665544
No 126
>smart00441 FF Contains two conserved F residues. A novel motif that often accompanies WW domains. Often contains two conserved Phe (F) residues.
Probab=32.83 E-value=1.2e+02 Score=19.09 Aligned_cols=48 Identities=15% Similarity=0.208 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhCCCC-CC-chhHHHHHHHHHHHH-hhcchhhhhhhhhhc
Q psy2268 19 DIKMAFRKKAIQYNPER-NN-DVKSQAMFTLICEAY-EVLSDKFRKAIYDQY 67 (261)
Q Consensus 19 eik~ayr~la~~~hPd~-~~-~~~a~~~f~~i~~Ay-~~L~d~~~r~~YD~~ 67 (261)
+.+.+|++|.....-+. +. ...+...+.. ...| .++++..++..|..|
T Consensus 2 ~~~~~F~~LL~e~~~~~~~~~W~~~~~~~~~-d~ry~~l~~~~~r~~lF~~~ 52 (55)
T smart00441 2 EAKEAFKELLKEHEVITPDTTWSEARKKLKN-DPRYKALLSESEREQLFEDH 52 (55)
T ss_pred hHHHHHHHHHHhCCCCCCCCcHHHHHHHHhc-ChHHHHhcChHHHHHHHHHH
Confidence 57889999977764442 21 1344444432 2245 455555666666654
No 127
>PF14706 Tnp_DNA_bind: Transposase DNA-binding; PDB: 3ECP_A 4DM0_A 1MUS_A 1MUH_A 1MM8_A.
Probab=32.43 E-value=46 Score=22.20 Aligned_cols=41 Identities=12% Similarity=0.045 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHH--HhCCCCCCchhHHHHHHHHHHHHhhcchhh
Q psy2268 18 YDIKMAFRKKAI--QYNPERNNDVKSQAMFTLICEAYEVLSDKF 59 (261)
Q Consensus 18 ~eik~ayr~la~--~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~ 59 (261)
+-+.+...+++. .-||...- |.+.+-+..+..||..|++|.
T Consensus 15 ~Rl~~Rl~~l~~~la~~p~~Si-p~a~~~wa~tkaAYRF~~N~~ 57 (58)
T PF14706_consen 15 KRLTRRLVKLAESLAEKPGASI-PQACQDWAETKAAYRFFRNPR 57 (58)
T ss_dssp HHHHHHHHHHHHHHHHTTTS-H-HHHTT-HHHHHHHHHHHT-TT
T ss_pred chHHHHHHHHHHHHHHCCCCcc-chhccCHHHHHHHHHhhcCCC
Confidence 446667777765 34665543 677778889999999999873
No 128
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=31.21 E-value=1.6e+02 Score=19.94 Aligned_cols=42 Identities=19% Similarity=0.426 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 22 MAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
+..|...++-||+.. ..+..+.|.+.|..|++.++...+|..
T Consensus 14 ~~~r~~~~~~~p~~~----~~eisk~l~~~Wk~ls~~eK~~y~~~a 55 (72)
T cd01388 14 KRHRRKVLQEYPLKE----NRAISKILGDRWKALSNEEKQPYYEEA 55 (72)
T ss_pred HHHHHHHHHHCCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 445556667788754 347778899999999998887666653
No 129
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=28.86 E-value=1.8e+02 Score=19.88 Aligned_cols=43 Identities=9% Similarity=0.064 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+|...+.-||+.. ..+..+.|.+.|..|++..+...++..
T Consensus 13 ~~~~r~~~~~~~p~~~----~~eisk~~g~~Wk~ls~eeK~~y~~~A 55 (77)
T cd01389 13 RQDKHAQLKTENPGLT----NNEISRIIGRMWRSESPEVKAYYKELA 55 (77)
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 4566777888899874 347778899999999987776555553
No 130
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=27.89 E-value=1.7e+02 Score=18.85 Aligned_cols=41 Identities=20% Similarity=0.268 Sum_probs=29.1
Q ss_pred HHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhcc
Q psy2268 24 FRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYG 68 (261)
Q Consensus 24 yr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G 68 (261)
.|...+.-||+.. ..+..+.+.+.|..|++.++....+.+-
T Consensus 15 ~r~~~~~~~p~~~----~~~i~~~~~~~W~~ls~~eK~~y~~~a~ 55 (66)
T cd01390 15 QRPKLKKENPDAS----VTEVTKILGEKWKELSEEEKKKYEEKAE 55 (66)
T ss_pred HHHHHHHHCcCCC----HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4555566788744 3477888999999999887776666543
No 131
>KOG0527|consensus
Probab=27.37 E-value=75 Score=29.01 Aligned_cols=41 Identities=20% Similarity=0.368 Sum_probs=32.3
Q ss_pred HHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 22 MAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
+..|+...+-.||-++ .|..+.|-+-|..|++.+||-.+|.
T Consensus 75 q~~RRkma~qnP~mHN----SEISK~LG~~WK~Lse~EKrPFi~E 115 (331)
T KOG0527|consen 75 QGQRRKLAKQNPKMHN----SEISKRLGAEWKLLSEEEKRPFVDE 115 (331)
T ss_pred HHHHHHHHHhCcchhh----HHHHHHHHHHHhhcCHhhhccHHHH
Confidence 3555555556777764 3889999999999999999998884
No 132
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=25.80 E-value=1.9e+02 Score=18.89 Aligned_cols=42 Identities=14% Similarity=0.255 Sum_probs=29.2
Q ss_pred HHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 22 MAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
+.++...+..||+.. ..+..+.+.+.|.-|++..+....+.+
T Consensus 13 ~~~~~~~k~~~p~~~----~~~i~~~~~~~W~~l~~~eK~~y~~~a 54 (69)
T PF00505_consen 13 KEKRAKLKEENPDLS----NKEISKILAQMWKNLSEEEKAPYKEEA 54 (69)
T ss_dssp HHHHHHHHHHSTTST----HHHHHHHHHHHHHCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccc----cccchhhHHHHHhcCCHHHHHHHHHHH
Confidence 445555666788876 447778889999999877666555443
No 133
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=25.49 E-value=76 Score=26.47 Aligned_cols=25 Identities=8% Similarity=-0.008 Sum_probs=21.2
Q ss_pred eEEeeeEEEEEEecCCCCCCCEEEec
Q psy2268 180 NFINTSKIVHIKIKPGLPEHTVFKFP 205 (261)
Q Consensus 180 ~~~~~~~~~~V~Ip~G~~~G~~i~~~ 205 (261)
|++..++.+.+++ .|+.+|++|++.
T Consensus 125 G~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 125 GRFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred cEEeeeEEEEEEe-eeccCCceeeHH
Confidence 4577788888999 999999999975
No 134
>PF00337 Gal-bind_lectin: Galactoside-binding lectin; InterPro: IPR001079 Galectins (also known as galaptins or S-lectin) are a family of proteins defined by having at least one characteristic carbohydrate recognition domain (CRD) with an affinity for beta-galactosides and sharing certain sequence elements. Members of the galectins family are found in mammals, birds, amphibians, fish, nematodes, sponges, and some fungi. Galectins are known to carry out intra- and extracellular functions through glycoconjugate-mediated recogntion. From the cytosol they may be secreted by non-classical pathways, but they may also be targeted to the nucleus or specific sub-cytosolic sites. Within the same peptide chain some galectins have a CRD with only a few additional amino acids, whereas others have two CRDs joined by a link peptide, and one (galectin-3) has one CRD joined to a different type of domain [, ]. The galectin carbohydrate recognition domain (CRD) is a beta-sandwich of about 135 amino acid. The two sheets are slightly bent with 6 strands forming the concave side and 5 strands forming the convex side. The concave side forms a groove in which carbohydrate is bound, and which is long enough to hold about a linear tetrasaccharide [, ].; GO: 0005529 sugar binding; PDB: 2WSU_B 2WT0_A 2WT1_A 2WT2_B 2WSV_A 1HLC_A 2ZGQ_A 3M3Q_B 1WW5_C 3M3E_A ....
Probab=25.24 E-value=75 Score=24.27 Aligned_cols=39 Identities=5% Similarity=0.065 Sum_probs=26.7
Q ss_pred EEEecCCCCCCCEEEecCCCCCCCC--------C-----CcEEEEEEeccCC
Q psy2268 189 HIKIKPGLPEHTVFKFPKEPLEYST--------S-----SEVIVITKDKPHD 227 (261)
Q Consensus 189 ~V~Ip~G~~~G~~i~~~g~G~~~~~--------~-----GDl~v~i~v~~h~ 227 (261)
+..||.|+..|+.|.+.|.-...++ . +|+.+++.+....
T Consensus 3 ~~~l~~~l~~G~~i~i~G~~~~~~~~f~inl~~~~~~~~~~i~lH~~~rf~~ 54 (133)
T PF00337_consen 3 TARLPGGLSPGDSIIIRGTVPPDAKRFSINLQTGPNDPDDDIALHFNPRFDE 54 (133)
T ss_dssp EEEETTEEETTEEEEEEEEEBTTSSBEEEEEEES-STTTTEEEEEEEEECTT
T ss_pred eEEcCCCCCCCcEEEEEEEECCCCCEEEEEecCCCcCCCCCEEEEEEEEeCC
Confidence 4567889999999999886543222 2 6677777666655
No 135
>PRK12426 elongation factor P; Provisional
Probab=24.61 E-value=1.2e+02 Score=25.34 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=17.7
Q ss_pred EEEEecCCCCCCCEEEecCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKE 207 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~ 207 (261)
+.|.||.=+..|++|++.-.
T Consensus 158 ~~V~VP~FI~~Gd~IkVdT~ 177 (185)
T PRK12426 158 VEVLVPPFVEIGDVIKVDTR 177 (185)
T ss_pred CEEEeCCcccCCCEEEEECC
Confidence 78999999999999998754
No 136
>COG0089 RplW Ribosomal protein L23 [Translation, ribosomal structure and biogenesis]
Probab=23.65 E-value=63 Score=23.85 Aligned_cols=20 Identities=25% Similarity=0.242 Sum_probs=14.5
Q ss_pred ccCCCCCCCHHHHHHHHHHH
Q psy2268 8 VLGLTRGASDYDIKMAFRKK 27 (261)
Q Consensus 8 ~Lgv~~~a~~~eik~ayr~l 27 (261)
++-|+++|+..+||+|..+|
T Consensus 25 vF~V~~~AtK~~IK~AvE~l 44 (94)
T COG0089 25 VFIVDPDATKPEIKAAVEEL 44 (94)
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 35677888888888877653
No 137
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=22.70 E-value=1e+02 Score=23.81 Aligned_cols=24 Identities=4% Similarity=-0.139 Sum_probs=18.3
Q ss_pred eeeEEEEEEecCCCCCCCEEEecC
Q psy2268 183 NTSKIVHIKIKPGLPEHTVFKFPK 206 (261)
Q Consensus 183 ~~~~~~~V~Ip~G~~~G~~i~~~g 206 (261)
.+...+++.-+.+++.||.+.+.-
T Consensus 39 ~~~~~~~~~~~~~~~~GD~V~v~i 62 (135)
T PF04246_consen 39 GKPITFRAPNPIGAKVGDRVEVEI 62 (135)
T ss_pred CCcEEEEecCCCCCCCCCEEEEEe
Confidence 344667777888999999888764
No 138
>KOG3442|consensus
Probab=22.61 E-value=1.1e+02 Score=23.90 Aligned_cols=32 Identities=6% Similarity=0.132 Sum_probs=28.2
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc
Q psy2268 7 AVLGLTRGASDYDIKMAFRKKAIQYNPERNND 38 (261)
Q Consensus 7 ~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~ 38 (261)
.||+|+...+.+||.+.|..|=.-..+.+...
T Consensus 63 qILnV~~~ln~eei~k~yehLFevNdkskGGS 94 (132)
T KOG3442|consen 63 QILNVKEPLNREEIEKRYEHLFEVNDKSKGGS 94 (132)
T ss_pred hHhCCCCCCCHHHHHHHHHHHHhccCcccCcc
Confidence 68999999999999999999998887777653
No 139
>PRK14578 elongation factor P; Provisional
Probab=22.40 E-value=1.5e+02 Score=24.77 Aligned_cols=20 Identities=15% Similarity=0.291 Sum_probs=17.7
Q ss_pred EEEEecCCCCCCCEEEecCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKE 207 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~ 207 (261)
+.|.||.=++.|++|++.-.
T Consensus 160 ~~v~VP~FI~~Gd~I~VdT~ 179 (187)
T PRK14578 160 LRLQVPPYLESGEKIKVDTR 179 (187)
T ss_pred CEEEeCCcccCCCEEEEECC
Confidence 78999999999999998754
No 140
>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1. Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of
Probab=22.30 E-value=2.2e+02 Score=18.91 Aligned_cols=18 Identities=17% Similarity=0.259 Sum_probs=7.7
Q ss_pred EEEEEecCCCCCCCEEEe
Q psy2268 187 IVHIKIKPGLPEHTVFKF 204 (261)
Q Consensus 187 ~~~V~Ip~G~~~G~~i~~ 204 (261)
.+.|.+|...+..-.+.+
T Consensus 9 ~i~v~~~~~~~~~~~v~~ 26 (84)
T cd06463 9 TITIPLKDVTKKDVKVEF 26 (84)
T ss_pred EEEEEcCCCCccceEEEE
Confidence 344455544433333333
No 141
>PRK13263 ureE urease accessory protein UreE; Provisional
Probab=21.97 E-value=5e+02 Score=22.06 Aligned_cols=63 Identities=13% Similarity=0.187 Sum_probs=40.7
Q ss_pred EEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCC--CCCCCEEEecCCCCCCCCCCcEEEEEEec
Q psy2268 147 VHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPG--LPEHTVFKFPKEPLEYSTSSEVIVITKDK 224 (261)
Q Consensus 147 ~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~~GDl~v~i~v~ 224 (261)
.-+|.|+..|....-.+... . +| ..+-|.+|.| +.+|++|..... .+|+|+..
T Consensus 22 ~~~V~L~~ddr~KrR~R~~t-d----~G-----------~evgl~LpRg~~L~dGDvL~~ddg---------~~IvV~aa 76 (206)
T PRK13263 22 APTLTLAFDARCKSRLAATL-D----TG-----------REVAVVLPRGTVLRDGDVLVAEDG---------ALVRVAAA 76 (206)
T ss_pred eeEEEECHHHhhcceEEEEC-C----CC-----------CEEEEECCCCCccCCCCEEEeCCC---------CEEEEEeC
Confidence 45677788776544333222 1 44 3588889976 789999987652 36777777
Q ss_pred cCCCeEEeCC
Q psy2268 225 PHDVFWREGA 234 (261)
Q Consensus 225 ~h~~f~R~g~ 234 (261)
|-+.+.....
T Consensus 77 pE~Vl~I~~~ 86 (206)
T PRK13263 77 PEAVLRVRAG 86 (206)
T ss_pred CCcEEEEECC
Confidence 7777765543
No 142
>TIGR01563 gp16_SPP1 phage head-tail adaptor, putative, SPP1 family. This family describes a small protein of about 100 amino acids found in bacteriophage and in bacterial prophage regions. Examples include gp9 of phage HK022 and gp16 of phage SPP1. This minor structural protein is suggested to be a head-tail adaptor protein (although the source of this annotation was not traced during construction of this model).
Probab=21.68 E-value=2.4e+02 Score=19.93 Aligned_cols=45 Identities=16% Similarity=0.156 Sum_probs=30.4
Q ss_pred eEEEEEEecCCCCCCCEEEecCCCCCCCCCCcEEEEEEeccCCCeEEeCCcEEEE
Q psy2268 185 SKIVHIKIKPGLPEHTVFKFPKEPLEYSTSSEVIVITKDKPHDVFWREGADLHMK 239 (261)
Q Consensus 185 ~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~GDl~v~i~v~~h~~f~R~g~DL~~~ 239 (261)
...+.|.-.+++.+.++|++.|. .+.|....++...++..+|++.
T Consensus 55 t~~~~iR~~~~i~~~~ri~~~g~----------~Y~I~~~~d~~~~~~~l~l~c~ 99 (101)
T TIGR01563 55 THVILIRYRKDVTNKMRVIYDGR----------IYTIGAVIDPSRTREELDLLTK 99 (101)
T ss_pred EEEEEEeccCCCChhhEEEECCE----------EEEEEeccCcccCcEEEEEEEE
Confidence 34566777889999999998653 5555555555566666666654
No 143
>cd08545 YcnI_like Reeler-like domain of YcnI and similar proteins. YcnI is a copper-responsive gene of Bacillus subtilis. It is homologous to an uncharacterized protein from Nocardia farcinica, which shares a conserved three-dimensional structure with cohesins and the reeler domain. Some members in this YcnI_like family have C-terminal domains (DUF461) that may bind copper.
Probab=21.12 E-value=1.6e+02 Score=23.77 Aligned_cols=50 Identities=24% Similarity=0.281 Sum_probs=30.7
Q ss_pred EEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCC-------CCCEEEecC
Q psy2268 150 VVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLP-------EHTVFKFPK 206 (261)
Q Consensus 150 l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~-------~G~~i~~~g 206 (261)
+.|.-.++--|...++.+.+. .||. -..+..|+|.||.|+. .|.++.+.-
T Consensus 5 Vtv~p~~a~aGs~~~~tfrVP--hecd-----g~~Ttkv~V~lP~gv~~v~p~p~pGWt~~~~~ 61 (152)
T cd08545 5 VTVEPKEAAAGSYYKLTFRVP--HGCD-----GAATTKVRVKLPEGVASVKPQPKPGWTVEVTK 61 (152)
T ss_pred EEeCCCCCCCCceEEEEEEcc--CCCC-----CCCceEEEEEcCCCccccceecCCCCEEEEEe
Confidence 445556666777777666632 4554 2334578999998864 455555544
No 144
>cd01780 PLC_epsilon_RA Ubiquitin-like domain of Phosphatidylinositide-specific phospholipase. PLC_epsilon_RA Phosphatidylinositide-specific phospholipase C (PLC) is a signaling enzyme that hydrolyzes membrane phospholipids to generate inositol triphosphate. PLC-epsilon represents a novel forth class of PLC that has a PLC catalytic core domain, a CDC25 guanine nucleotide exchange factor domain and two RA (Ras-association) domains of which the second is critical for Ras activation of the enzyme.
Probab=20.43 E-value=1.1e+02 Score=22.50 Aligned_cols=35 Identities=26% Similarity=0.239 Sum_probs=26.4
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN 37 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~ 37 (261)
..+|.||-++..+|.++|-+.--..|.+.+||-+.
T Consensus 11 dqP~~il~a~~~STa~Dvi~Qal~KA~rs~~~~~~ 45 (93)
T cd01780 11 DQPYAILRAPRVSTAQDVIQQTLCKARRSNPNPSD 45 (93)
T ss_pred CCCeeEEEccccccHHHHHHHHHHHhccCCCCccc
Confidence 46899999999999888665544457777777654
Done!