Query psy2268
Match_columns 261
No_of_seqs 250 out of 2157
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 20:22:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2268.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2268hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 2.1E-54 7.3E-59 388.4 13.7 225 3-260 28-258 (329)
2 3agx_A DNAJ homolog subfamily 100.0 4.4E-29 1.5E-33 206.5 14.1 114 145-260 4-119 (181)
3 2q2g_A HSP40 protein, heat sho 100.0 9.6E-29 3.3E-33 204.3 14.8 112 143-260 3-119 (180)
4 1nlt_A Protein YDJ1, mitochond 100.0 1E-28 3.6E-33 213.8 15.1 116 145-260 13-188 (248)
5 1c3g_A Heat shock protein 40; 100.0 4.6E-28 1.6E-32 198.5 14.8 109 145-260 2-113 (170)
6 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.4E-26 4.9E-31 174.5 5.3 75 1-75 1-76 (103)
7 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.4E-25 4.7E-30 160.3 7.9 74 1-74 1-74 (77)
8 2ctr_A DNAJ homolog subfamily 99.9 5.7E-24 1.9E-28 155.7 8.2 74 2-75 6-79 (88)
9 2dn9_A DNAJ homolog subfamily 99.9 1.5E-23 5E-28 150.4 6.7 70 2-71 6-76 (79)
10 2cug_A Mkiaa0962 protein; DNAJ 99.9 1.3E-23 4.3E-28 153.9 6.4 71 1-71 15-85 (88)
11 2ctp_A DNAJ homolog subfamily 99.9 1.3E-23 4.6E-28 150.3 6.2 70 2-71 6-75 (78)
12 2lgw_A DNAJ homolog subfamily 99.9 1.2E-23 4.2E-28 157.1 6.2 73 2-74 1-75 (99)
13 2ej7_A HCG3 gene; HCG3 protein 99.9 2.3E-23 7.8E-28 150.5 6.2 71 2-72 8-80 (82)
14 2o37_A Protein SIS1; HSP40, J- 99.9 3.2E-23 1.1E-27 153.0 6.2 72 2-75 7-78 (92)
15 2dmx_A DNAJ homolog subfamily 99.9 5.7E-23 1.9E-27 151.6 6.9 73 2-74 8-82 (92)
16 2och_A Hypothetical protein DN 99.9 9.2E-23 3.2E-27 144.1 6.6 67 2-70 7-73 (73)
17 2ctw_A DNAJ homolog subfamily 99.9 1.2E-22 4.1E-27 154.5 7.0 72 2-73 16-88 (109)
18 2ctq_A DNAJ homolog subfamily 99.9 8.3E-23 2.9E-27 156.1 5.7 72 2-73 19-91 (112)
19 2yua_A Williams-beuren syndrom 99.9 1.9E-22 6.5E-27 150.8 7.5 73 2-74 16-91 (99)
20 1wjz_A 1700030A21RIK protein; 99.8 7.8E-22 2.7E-26 146.0 4.3 68 2-69 15-89 (94)
21 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.6E-21 8.9E-26 147.1 4.5 69 2-70 14-87 (109)
22 3apq_A DNAJ homolog subfamily 99.8 7.7E-21 2.7E-25 159.8 6.3 73 3-75 2-75 (210)
23 2ys8_A RAB-related GTP-binding 99.8 1.2E-20 4.1E-25 138.5 5.5 62 2-63 26-87 (90)
24 2l6l_A DNAJ homolog subfamily 99.8 8.1E-20 2.8E-24 147.3 5.5 69 2-70 9-84 (155)
25 1gh6_A Large T antigen; tumor 99.8 1.8E-20 6.1E-25 143.1 -0.2 65 3-70 8-74 (114)
26 1faf_A Large T antigen; J doma 99.8 1.3E-19 4.4E-24 129.7 4.0 64 4-71 12-77 (79)
27 2pf4_E Small T antigen; PP2A, 99.8 4.3E-20 1.5E-24 150.4 0.9 64 3-69 11-76 (174)
28 1iur_A KIAA0730 protein; DNAJ 99.7 3.1E-19 1.1E-23 130.1 2.7 60 3-62 16-77 (88)
29 3hho_A CO-chaperone protein HS 99.7 1.3E-18 4.5E-23 142.6 5.0 66 2-67 3-76 (174)
30 1n4c_A Auxilin; four helix bun 99.7 1.3E-18 4.3E-23 142.6 3.9 62 3-64 117-182 (182)
31 1fpo_A HSC20, chaperone protei 99.7 2E-18 6.8E-23 141.1 4.6 65 4-68 2-74 (171)
32 2qwo_B Putative tyrosine-prote 99.7 1.8E-18 6.2E-23 126.6 3.0 55 3-57 33-91 (92)
33 3bvo_A CO-chaperone protein HS 99.7 6.3E-18 2.2E-22 142.0 5.5 65 2-66 42-114 (207)
34 3ag7_A Putative uncharacterize 99.7 3.7E-18 1.3E-22 128.7 2.9 57 2-59 40-104 (106)
35 3apo_A DNAJ homolog subfamily 99.7 2.4E-18 8.3E-23 170.3 1.9 74 2-75 20-94 (780)
36 2guz_A Mitochondrial import in 99.7 1.6E-17 5.4E-22 116.4 3.3 56 3-61 14-70 (71)
37 3uo3_A J-type CO-chaperone JAC 99.7 1.3E-17 4.6E-22 137.2 3.3 65 2-68 10-81 (181)
38 3i38_A Putative chaperone DNAJ 99.6 8.6E-15 2.9E-19 110.8 7.9 83 137-235 5-88 (109)
39 1xao_A YDJ1, mitochondrial pro 99.5 2.7E-14 9.1E-19 110.1 5.7 83 139-236 2-91 (121)
40 2q2g_A HSP40 protein, heat sho 99.3 7.9E-12 2.7E-16 102.8 9.0 82 136-232 85-170 (180)
41 3agx_A DNAJ homolog subfamily 99.3 8.4E-12 2.9E-16 102.7 9.0 82 136-232 85-170 (181)
42 1nlt_A Protein YDJ1, mitochond 99.3 3.6E-12 1.2E-16 109.9 6.9 87 136-237 154-247 (248)
43 1c3g_A Heat shock protein 40; 99.3 5E-12 1.7E-16 103.0 7.2 81 136-231 79-163 (170)
44 3lz8_A Putative chaperone DNAJ 99.2 1.5E-11 5.1E-16 110.1 7.9 84 136-235 224-308 (329)
45 2y4t_A DNAJ homolog subfamily 99.2 1.9E-11 6.5E-16 110.8 5.8 64 3-66 382-449 (450)
46 2guz_B Mitochondrial import in 98.9 8.6E-10 2.9E-14 75.2 4.3 51 5-58 6-59 (65)
47 3i38_A Putative chaperone DNAJ 98.8 2.9E-09 9.8E-14 80.3 3.7 37 224-260 2-38 (109)
48 2ctt_A DNAJ homolog subfamily 92.8 0.003 1E-07 46.5 -4.6 25 144-168 2-26 (104)
49 2cqn_A Formin-binding protein 66.0 11 0.00039 25.6 4.9 54 16-70 7-64 (77)
50 2b7e_A PRE-mRNA processing pro 58.0 18 0.0006 23.4 4.4 49 18-68 3-56 (59)
51 1uzc_A Hypothetical protein FL 51.7 30 0.001 23.0 5.0 53 14-69 11-67 (71)
52 3zsj_A Galectin-3; sugar bindi 42.5 29 0.00099 26.1 4.3 39 188-226 6-52 (138)
53 3nv1_A Galectin-9, galectin 9 42.2 38 0.0013 25.4 4.9 39 188-226 10-56 (138)
54 3zxf_A Galectin-7; sugar bindi 41.5 36 0.0012 25.5 4.7 40 188-227 8-59 (138)
55 2r0h_A CGL3 lectin; galectin-r 39.1 68 0.0023 25.0 6.0 21 188-208 9-29 (164)
56 4a3n_A Transcription factor SO 35.1 79 0.0027 20.1 5.1 42 21-66 14-55 (71)
57 2d6m_A Galectin-9, lectin, gal 34.9 54 0.0019 25.2 4.9 39 188-226 19-68 (159)
58 2wkk_A Galectin-2; sugar-bindi 34.8 44 0.0015 25.5 4.3 39 188-226 9-57 (150)
59 2yro_A Galectin-8; GAL-BIND le 33.8 55 0.0019 25.1 4.7 21 188-208 19-39 (155)
60 3i8t_A Galectin-4; S-type lect 31.1 71 0.0024 24.7 5.0 40 188-227 31-82 (164)
61 1ny9_A Transcriptional activat 29.6 92 0.0031 23.1 5.3 43 20-69 82-124 (143)
62 2d7l_A WD repeat and HMG-box D 29.2 97 0.0033 20.8 4.8 45 21-68 17-61 (81)
63 1i11_A Transcription factor SO 28.5 1.1E+02 0.0037 20.1 5.0 43 21-67 16-58 (81)
64 1hry_A Human SRY; DNA, DNA-bin 28.4 1.2E+02 0.0042 19.5 5.3 42 21-66 16-57 (76)
65 3f27_D Transcription factor SO 28.3 1.3E+02 0.0044 19.8 5.4 43 21-67 18-60 (83)
66 1qqr_A Streptokinase domain B; 27.5 30 0.001 26.1 2.0 30 6-35 35-64 (138)
67 3ap9_A Galectin-8; beta-sandwi 27.4 78 0.0027 24.1 4.6 39 188-226 19-71 (154)
68 1wz6_A HMG-box transcription f 27.2 1.3E+02 0.0044 19.8 5.2 43 21-67 19-61 (82)
69 1ueb_A EF-P, TT0860, elongatio 26.5 73 0.0025 25.3 4.3 19 188-206 157-175 (184)
70 2crj_A SWI/SNF-related matrix- 26.1 1.4E+02 0.0049 20.2 5.4 42 21-66 19-60 (92)
71 2dod_A Transcription elongatio 25.8 1.5E+02 0.0051 20.2 5.3 55 14-71 13-70 (82)
72 2cs1_A PMS1 protein homolog 1; 25.4 1.3E+02 0.0044 20.5 5.0 42 21-66 19-60 (92)
73 2zhn_A Galectin-9; beta sandwi 25.3 96 0.0033 23.3 4.7 39 188-226 17-67 (148)
74 1x50_A Galectin-4; GAL-BIND le 25.0 61 0.0021 25.1 3.6 22 188-209 29-50 (164)
75 1wgf_A Upstream binding factor 24.9 1.3E+02 0.0044 20.4 4.9 44 21-68 32-75 (90)
76 4euw_A Transcription factor SO 24.2 1.5E+02 0.0051 20.8 5.3 43 21-67 41-83 (106)
77 3b9c_A HSPC159; beta sandwich, 23.6 86 0.0029 23.6 4.1 24 187-210 11-34 (144)
78 1gt0_D Transcription factor SO 23.3 1.5E+02 0.0051 19.4 4.9 42 22-67 15-56 (80)
79 2e6o_A HMG box-containing prot 23.0 1.5E+02 0.0051 19.9 4.9 42 21-66 29-70 (87)
80 3u2b_C Transcription factor SO 22.6 1.6E+02 0.0056 19.0 5.1 42 21-66 14-55 (79)
81 2co9_A Thymus high mobility gr 21.9 1.7E+02 0.0059 20.2 5.3 42 21-66 29-70 (102)
82 1yby_A Translation elongation 21.5 71 0.0024 26.1 3.4 19 188-206 188-206 (215)
83 1j46_A SRY, sex-determining re 21.5 1.8E+02 0.0063 19.2 5.3 43 21-67 16-58 (85)
84 2lef_A LEF-1 HMG, protein (lym 21.4 1.9E+02 0.0064 19.2 5.3 43 21-67 14-56 (86)
85 2eqz_A High mobility group pro 21.3 1.6E+02 0.0054 19.6 4.8 43 22-66 28-70 (86)
86 1hme_A High mobility group pro 21.2 1.7E+02 0.0059 18.8 5.5 42 21-66 18-59 (77)
87 1ckt_A High mobility group 1 p 21.1 1.6E+02 0.0055 18.6 4.6 42 23-66 15-56 (71)
88 3ech_C 25-MER fragment of prot 20.5 23 0.00079 18.1 0.2 16 54-69 7-22 (25)
89 3nm9_A HMG-D, high mobility gr 20.2 1.8E+02 0.0062 18.6 4.8 38 21-65 15-52 (73)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=2.1e-54 Score=388.44 Aligned_cols=225 Identities=22% Similarity=0.299 Sum_probs=101.0
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccCCcCCCCC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRGVVTPLGY 82 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~~~~~~~~ 82 (261)
+|||+||||+++|+.+|||+|||+||++||||+|+++.|+++|++|++||++|+||.+|+.||+|+......+..++.++
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~~ 107 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQT 107 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccccccc
Confidence 69999999999999999999999999999999999888999999999999999999999999999654221111000000
Q ss_pred -CCCCccCCCccccccccCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCceEEEEEeehHhhhcCc
Q psy2268 83 -VPPYEYDRDTKRTFRNFFGTESPFADLLNAYRPPKKQETSGDTATNLQGEKGSKQDITLSSNQQVHTVVVSLEELYRGC 161 (261)
Q Consensus 83 -~~~~~~~~~~~~~f~~~fg~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~di~~~l~vsl~e~~~G~ 161 (261)
..+|. ..++.++|++|||+. + .+ +++..+.+++| +.++|.|||+|++.|+
T Consensus 108 ~~~~f~-~~~f~diF~~~Fg~~----------g---------~~--~~~~~~~~g~D-------l~~~l~vsleea~~G~ 158 (329)
T 3lz8_A 108 HEQSYS-QQDFDDIFSSMFGQQ----------A---------HQ--RRRQHAARGHD-------LEIEVAVFLEETLAEQ 158 (329)
T ss_dssp ---------------------------------------------------CCCCCC-------EEEEECCCTTGGGSCE
T ss_pred ccCCcC-CCchhhhhHhhhcCc----------C---------CC--CCCCCcCCCCC-------EEEEEecchhhhhhcc
Confidence 00110 012233444444310 0 00 01111334455 9999999999999999
Q ss_pred EEEEEeEE--EecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC---CCcEEEEEEeccCCCeEEeCCcE
Q psy2268 162 VKLLTVPV--QEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST---SSEVIVITKDKPHDVFWREGADL 236 (261)
Q Consensus 162 ~~~i~~~~--~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~---~GDl~v~i~v~~h~~f~R~g~DL 236 (261)
+++|.+.+ +|+.|.. .+.+.++++|+||||+++|++|||+|+|+++++ +|||||+|+|++|+.|+|+|+||
T Consensus 159 ~k~i~i~~~v~~g~G~v----~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL 234 (329)
T 3lz8_A 159 TRTISYNLPVYNVFGMI----ESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNL 234 (329)
T ss_dssp EEEEEEEEEECCSCC-C----CEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEE
T ss_pred ceEEEEEEEeecCCeEE----EEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcE
Confidence 99999994 3334432 133467899999999999999999999999864 89999999999999999999999
Q ss_pred EEEeecCHHHHhcCCeEEEeeeec
Q psy2268 237 HMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 237 ~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+++++|+|+|||||++++|+||..
T Consensus 235 ~~~~~Isl~eAllG~~v~VptLdG 258 (329)
T 3lz8_A 235 EIVLPLAPWEAALGAKVTVPTLKE 258 (329)
T ss_dssp EEEEEECHHHHHHCEEEEECCSSS
T ss_pred EEEEECCHHHHcCCCeEEEECCCC
Confidence 999999999999999999999974
No 2
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=99.96 E-value=4.4e-29 Score=206.45 Aligned_cols=114 Identities=30% Similarity=0.481 Sum_probs=101.2
Q ss_pred ceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC--CCcEEEEEE
Q psy2268 145 QQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--SSEVIVITK 222 (261)
Q Consensus 145 di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~GDl~v~i~ 222 (261)
|+.++|+|||+|||+|+++++.+.+.|. .|.+ .+++.+.++++|+||||+++|++|+|+|+|+++++ +|||||+|+
T Consensus 4 d~~~~l~islee~~~G~~k~i~i~~~c~-~c~G-~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~ 81 (181)
T 3agx_A 4 PVTHDLRVSLEEIYSGCTKKMKISHKRL-NPDG-KSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLK 81 (181)
T ss_dssp --CEEEEECHHHHHHCEEEEEEEEEEEE-CTTS-SCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEE
T ss_pred CEEEEEEEEHHHhcCCcEEEEEEecccC-CCCC-ceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEE
Confidence 4999999999999999999999984331 2321 13477889999999999999999999999999887 999999999
Q ss_pred eccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 223 DKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 223 v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
+++|+.|+|+|+||+++++|||+|||+|+++.|+||..
T Consensus 82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG 119 (181)
T 3agx_A 82 DKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDG 119 (181)
T ss_dssp ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTS
T ss_pred EeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCC
Confidence 99999999999999999999999999999999999865
No 3
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=99.96 E-value=9.6e-29 Score=204.31 Aligned_cols=112 Identities=24% Similarity=0.329 Sum_probs=101.5
Q ss_pred CCceEEEEEeehHhhhcCcEEEEEeE--EEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCC-CCC--CCcE
Q psy2268 143 SNQQVHTVVVSLEELYRGCVKLLTVP--VQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLE-YST--SSEV 217 (261)
Q Consensus 143 g~di~~~l~vsl~e~~~G~~~~i~~~--~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~--~GDl 217 (261)
+.|+.++|+|||+|||+||++++.+. +.|.+ +++.+.++++|+||||+++|++|+|+|+|++ .++ +|||
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl 76 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDL 76 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccE
Confidence 34599999999999999999999998 33433 3377889999999999999999999999998 555 8999
Q ss_pred EEEEEeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 218 IVITKDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 218 ~v~i~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
||+|++++|+.|+|+|+||+++++|||+|||+|+++.|+||..
T Consensus 77 ~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG 119 (180)
T 2q2g_A 77 VLIIQTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDN 119 (180)
T ss_dssp EEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTC
T ss_pred EEEEEEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCC
Confidence 9999999999999999999999999999999999999999975
No 4
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.96 E-value=1e-28 Score=213.76 Aligned_cols=116 Identities=24% Similarity=0.414 Sum_probs=102.0
Q ss_pred ceEEEEEeehHhhhcCcEEEEEeEE--Ee--c--CC-----------ceee-----------------------------
Q psy2268 145 QQVHTVVVSLEELYRGCVKLLTVPV--QE--I--DP-----------CSVQ----------------------------- 178 (261)
Q Consensus 145 di~~~l~vsl~e~~~G~~~~i~~~~--~~--~--~G-----------~~~~----------------------------- 178 (261)
|+.++|+|||+|||+|++++|.+.+ .| | +| |.++
T Consensus 13 d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~ 92 (248)
T 1nlt_A 13 DIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDI 92 (248)
T ss_dssp CEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSC
T ss_pred CEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEE
Confidence 3999999999999999999999982 22 1 11 1110
Q ss_pred ------------eeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC--CCcEEEEEEeccCCCeEEeCCcEEEEeecCH
Q psy2268 179 ------------LNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST--SSEVIVITKDKPHDVFWREGADLHMKKNVSL 244 (261)
Q Consensus 179 ------------~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~--~GDl~v~i~v~~h~~f~R~g~DL~~~~~Isl 244 (261)
.+++.+.++++|+||||+++|++|+|+|+|+++++ +|||||+|++++|+.|+|+|+|||++++|||
T Consensus 93 i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl 172 (248)
T 1nlt_A 93 IDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDL 172 (248)
T ss_dssp CCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEH
T ss_pred eccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCH
Confidence 03567889999999999999999999999999887 9999999999999999999999999999999
Q ss_pred HHHhcCCeEEEeeeec
Q psy2268 245 TPQERNQKYTTRMFTV 260 (261)
Q Consensus 245 ~eAl~G~~~~i~tl~~ 260 (261)
+|||||+++.|+||..
T Consensus 173 ~eAllG~~i~v~tldG 188 (248)
T 1nlt_A 173 LTAIAGGEFALEHVSG 188 (248)
T ss_dssp HHHHHCBCCEEECSSS
T ss_pred HHHhcCCEEEEeCCCC
Confidence 9999999999999975
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=99.95 E-value=4.6e-28 Score=198.45 Aligned_cols=109 Identities=20% Similarity=0.235 Sum_probs=100.0
Q ss_pred ceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCC-CC--CCcEEEEE
Q psy2268 145 QQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEY-ST--SSEVIVIT 221 (261)
Q Consensus 145 di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~-~~--~GDl~v~i 221 (261)
|+.++|+|||+|||+||++++.+.+.+++|. + +.++++|+||||+++|++|+|+|+|+++ ++ +|||||+|
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~------~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i 74 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGA------S-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVI 74 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTE------E-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEE
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCc------E-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEE
Confidence 5999999999999999999999986555552 4 7789999999999999999999999954 44 89999999
Q ss_pred EeccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 222 KDKPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 222 ~v~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
++++|+.|+|+|+||+++++|||+||++|+++.|+||..
T Consensus 75 ~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG 113 (170)
T 1c3g_A 75 QEKSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDG 113 (170)
T ss_dssp EECCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSS
T ss_pred EEccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCC
Confidence 999999999999999999999999999999999999975
No 6
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.93 E-value=1.4e-26 Score=174.47 Aligned_cols=75 Identities=39% Similarity=0.776 Sum_probs=71.0
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccC
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRG 75 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~ 75 (261)
|..|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||++|++++..+
T Consensus 1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 76 (103)
T 1bq0_A 1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQG 76 (103)
T ss_dssp CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhccc
Confidence 78999999999999999999999999999999999985 7788999999999999999999999999999988754
No 7
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.92 E-value=1.4e-25 Score=160.27 Aligned_cols=74 Identities=50% Similarity=0.910 Sum_probs=71.0
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhcc
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKR 74 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~ 74 (261)
|+.|||+||||+++|+.++||+|||+|++++|||+++++.+.+.|++|++||++|+||.+|+.||++|++++.+
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 88999999999999999999999999999999999998889999999999999999999999999999987754
No 8
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=5.7e-24 Score=155.71 Aligned_cols=74 Identities=41% Similarity=0.698 Sum_probs=70.5
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRG 75 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~ 75 (261)
..|||+||||+++|+.+|||+|||+|+++||||+++.+.+.++|++|++||++|+||.+|+.||++|++++..+
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 46899999999999999999999999999999999988899999999999999999999999999999988754
No 9
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=1.5e-23 Score=150.42 Aligned_cols=70 Identities=41% Similarity=0.737 Sum_probs=66.1
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchh
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEEN 71 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~ 71 (261)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||++|..+
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 5689999999999999999999999999999999985 788999999999999999999999999999754
No 10
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.89 E-value=1.3e-23 Score=153.86 Aligned_cols=71 Identities=39% Similarity=0.713 Sum_probs=67.2
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchh
Q psy2268 1 MGFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEEN 71 (261)
Q Consensus 1 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~ 71 (261)
+..|||+||||+++|+.++||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.||++|+.+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 35799999999999999999999999999999999998889999999999999999999999999999753
No 11
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=1.3e-23 Score=150.28 Aligned_cols=70 Identities=39% Similarity=0.724 Sum_probs=66.8
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchh
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEEN 71 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~ 71 (261)
..|||+||||+++|+.++||+|||+|+++||||+++.+.+.+.|++|++||++|+||.+|+.||++|+++
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4689999999999999999999999999999999998889999999999999999999999999999764
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=157.09 Aligned_cols=73 Identities=47% Similarity=0.788 Sum_probs=65.6
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhcc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKR 74 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~ 74 (261)
+.|||+||||+++|+.+|||+|||+|+++||||+++. +.+.+.|++|++||++|+||.+|+.||++|.+++.+
T Consensus 1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 3799999999999999999999999999999999986 468899999999999999999999999999887764
No 13
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=2.3e-23 Score=150.47 Aligned_cols=71 Identities=41% Similarity=0.705 Sum_probs=66.3
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhh
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENL 72 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~ 72 (261)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||++|+.++
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 4689999999999999999999999999999999986 4678999999999999999999999999998654
No 14
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.2e-23 Score=152.95 Aligned_cols=72 Identities=35% Similarity=0.707 Sum_probs=66.8
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRG 75 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~ 75 (261)
..|||+||||+++|+.+|||+|||+|+++||||+++. ..++|++|++||++|+||.+|+.||++|++++..+
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTG--DTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTC--CHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 4689999999999999999999999999999999964 34799999999999999999999999999988754
No 15
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=5.7e-23 Score=151.59 Aligned_cols=73 Identities=42% Similarity=0.729 Sum_probs=68.1
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhcc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKR 74 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~ 74 (261)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||++|.+++..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 3689999999999999999999999999999999986 478899999999999999999999999999887764
No 16
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.87 E-value=9.2e-23 Score=144.06 Aligned_cols=67 Identities=48% Similarity=0.802 Sum_probs=61.3
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccch
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEE 70 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~ 70 (261)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.|++|++||++|+||.+|+.||++|++
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~--~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPD--GAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTT--CHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcC--HHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999999974 358999999999999999999999999964
No 17
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=1.2e-22 Score=154.46 Aligned_cols=72 Identities=39% Similarity=0.677 Sum_probs=68.2
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLK 73 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~ 73 (261)
..|||+||||+++|+.+|||+|||+|++++|||+++. +.+.++|++|++||++|+||.+|+.||++|..++.
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 5789999999999999999999999999999999985 78899999999999999999999999999988765
No 18
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=8.3e-23 Score=156.07 Aligned_cols=72 Identities=24% Similarity=0.447 Sum_probs=67.6
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN-DVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLK 73 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~-~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~ 73 (261)
..|||+||||+++|+.++||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++|..++.
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 478999999999999999999999999999999998 478899999999999999999999999999987653
No 19
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.9e-22 Score=150.77 Aligned_cols=73 Identities=30% Similarity=0.529 Sum_probs=65.9
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHHHHhhcchhhhhhhhhhc--cchhhcc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICEAYEVLSDKFRKAIYDQY--GEENLKR 74 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~--G~~~~~~ 74 (261)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||++ +.+.+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e~~~~ 91 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLRG 91 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHHHHHC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccccccccC
Confidence 4689999999999999999999999999999999974 78899999999999999999999999984 4455543
No 20
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.84 E-value=7.8e-22 Score=145.98 Aligned_cols=68 Identities=24% Similarity=0.434 Sum_probs=63.1
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-------hhHHHHHHHHHHHHhhcchhhhhhhhhhccc
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-------VKSQAMFTLICEAYEVLSDKFRKAIYDQYGE 69 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-------~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~ 69 (261)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|++|++||++|+||.+|+.||.+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4689999999999999999999999999999999873 5688999999999999999999999999654
No 21
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.83 E-value=2.6e-21 Score=147.08 Aligned_cols=69 Identities=30% Similarity=0.449 Sum_probs=64.7
Q ss_pred CCCCccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCc----hhHHHHHHHHHHHHhhcchhhhhhhhhhccch
Q psy2268 2 GFNYYAVLGLTRGA-SDYDIKMAFRKKAIQYNPERNND----VKSQAMFTLICEAYEVLSDKFRKAIYDQYGEE 70 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a-~~~eik~ayr~la~~~hPd~~~~----~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~ 70 (261)
..|||+||||+++| +.+|||+|||+|++++|||+++. +.+.++|++|++||++|+||.+|+.||+++..
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 46899999999999 99999999999999999999975 67889999999999999999999999998853
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.82 E-value=7.7e-21 Score=159.77 Aligned_cols=73 Identities=37% Similarity=0.676 Sum_probs=68.5
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccC
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN-DVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRG 75 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~-~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~ 75 (261)
.|||+||||+++|+.+|||+|||+|+++||||+++ ++.+.++|++|++||++|+||.+|+.||++|++++...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence 69999999999999999999999999999999997 47889999999999999999999999999999877643
No 23
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.2e-20 Score=138.51 Aligned_cols=62 Identities=23% Similarity=0.379 Sum_probs=58.9
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhh
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAI 63 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~ 63 (261)
..|||+||||+++|+.+|||+|||+|+++||||+++++.+.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 47899999999999999999999999999999999988899999999999999999999863
No 24
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=8.1e-20 Score=147.26 Aligned_cols=69 Identities=25% Similarity=0.419 Sum_probs=63.0
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCch-------hHHHHHHHHHHHHhhcchhhhhhhhhhccch
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDV-------KSQAMFTLICEAYEVLSDKFRKAIYDQYGEE 70 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~-------~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~ 70 (261)
..|||+||||+++|+.++||+|||+|++++|||+++.. .|.++|++|++||++|+||.+|+.||..+..
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~~ 84 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRCE 84 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcch
Confidence 46899999999999999999999999999999998753 3678999999999999999999999987643
No 25
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.77 E-value=1.8e-20 Score=143.12 Aligned_cols=65 Identities=22% Similarity=0.389 Sum_probs=60.7
Q ss_pred CCCccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccch
Q psy2268 3 FNYYAVLGLTRGASD--YDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEE 70 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~--~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~ 70 (261)
.+||+||||+++|+. ++||+|||+||+++|||++++ .++|++|++||++|+||.+|+.||.+|..
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 479999999999999 999999999999999999976 47999999999999999999999998853
No 26
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.77 E-value=1.3e-19 Score=129.68 Aligned_cols=64 Identities=11% Similarity=0.263 Sum_probs=57.9
Q ss_pred CCccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccchh
Q psy2268 4 NYYAVLGLTRG--ASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEEN 71 (261)
Q Consensus 4 d~y~~Lgv~~~--a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~ 71 (261)
++|+||||+++ |+.++||+|||+||+++|||++++ .++|++|++||++|+|+.+|.. |.||.++
T Consensus 12 ~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 12 RLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 68999999999 999999999999999999999864 4899999999999999999987 5577643
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.76 E-value=4.3e-20 Score=150.39 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=57.6
Q ss_pred CCCccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccc
Q psy2268 3 FNYYAVLGLTRGAS--DYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGE 69 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~--~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~ 69 (261)
.|||+||||+++|+ .+|||+|||++|+++|||+++++ ++|++|++||++|+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~---e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC---TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 47999999999999 69999999999999999999763 789999999999999999999999996
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.75 E-value=3.1e-19 Score=130.12 Aligned_cols=60 Identities=12% Similarity=0.176 Sum_probs=55.7
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc--hhHHHHHHHHHHHHhhcchhhhhh
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND--VKSQAMFTLICEAYEVLSDKFRKA 62 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~--~~a~~~f~~i~~Ay~~L~d~~~r~ 62 (261)
.++|+||||+++|+.+|||+|||+||++||||++++ +.+.++|++|++||++|+|...|.
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 478999999999999999999999999999999986 468899999999999999987773
No 29
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.73 E-value=1.3e-18 Score=142.58 Aligned_cols=66 Identities=23% Similarity=0.372 Sum_probs=60.2
Q ss_pred CCCCccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCch------hHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 2 GFNYYAVLGLTRGAS--DYDIKMAFRKKAIQYNPERNNDV------KSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~--~~eik~ayr~la~~~hPd~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
..|||+||||+++++ .++||+|||+|+++||||+++.. .|.++|+.|++||++|+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 469999999999998 99999999999999999998752 2678999999999999999999999984
No 30
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.73 E-value=1.3e-18 Score=142.60 Aligned_cols=62 Identities=15% Similarity=0.355 Sum_probs=58.2
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCchh----HHHHHHHHHHHHhhcchhhhhhhh
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDVK----SQAMFTLICEAYEVLSDKFRKAIY 64 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~~----a~~~f~~i~~Ay~~L~d~~~r~~Y 64 (261)
.|||++|||+++|+.++||+|||+|+++||||+++... |.++|++|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 58999999999999999999999999999999997532 789999999999999999999987
No 31
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.72 E-value=2e-18 Score=141.11 Aligned_cols=65 Identities=18% Similarity=0.317 Sum_probs=60.0
Q ss_pred CCccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCch------hHHHHHHHHHHHHhhcchhhhhhhhhhcc
Q psy2268 4 NYYAVLGLTRGA--SDYDIKMAFRKKAIQYNPERNNDV------KSQAMFTLICEAYEVLSDKFRKAIYDQYG 68 (261)
Q Consensus 4 d~y~~Lgv~~~a--~~~eik~ayr~la~~~hPd~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G 68 (261)
|||++|||++++ +.++||+|||+|+++||||+++.. .|.++|+.|++||++|+||.+|+.||...
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 899999999999 999999999999999999998752 35679999999999999999999999864
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.71 E-value=1.8e-18 Score=126.59 Aligned_cols=55 Identities=13% Similarity=0.282 Sum_probs=50.8
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCc-h---hHHHHHHHHHHHHhhcch
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNND-V---KSQAMFTLICEAYEVLSD 57 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~-~---~a~~~f~~i~~Ay~~L~d 57 (261)
.++|++|||++.|+.+|||+|||++|++||||+|++ + .|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999999985 2 378899999999999975
No 33
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.70 E-value=6.3e-18 Score=142.02 Aligned_cols=65 Identities=15% Similarity=0.292 Sum_probs=58.9
Q ss_pred CCCCccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCch------hHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 2 GFNYYAVLGLTRG--ASDYDIKMAFRKKAIQYNPERNNDV------KSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 2 ~~d~y~~Lgv~~~--a~~~eik~ayr~la~~~hPd~~~~~------~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
..|||+||||+++ ++.++||+|||+|+++||||+++.. .|.++|++|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4689999999986 7999999999999999999998741 356789999999999999999999996
No 34
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.70 E-value=3.7e-18 Score=128.67 Aligned_cols=57 Identities=12% Similarity=0.280 Sum_probs=51.6
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCch--------hHHHHHHHHHHHHhhcchhh
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDV--------KSQAMFTLICEAYEVLSDKF 59 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~--------~a~~~f~~i~~Ay~~L~d~~ 59 (261)
+.|||+||+++. |+.++||+|||++|++||||+|+++ .|+++|++|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 469999999996 9999999999999999999998742 46899999999999999975
No 35
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.69 E-value=2.4e-18 Score=170.26 Aligned_cols=74 Identities=36% Similarity=0.667 Sum_probs=40.9
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC-chhHHHHHHHHHHHHhhcchhhhhhhhhhccchhhccC
Q psy2268 2 GFNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNN-DVKSQAMFTLICEAYEVLSDKFRKAIYDQYGEENLKRG 75 (261)
Q Consensus 2 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~-~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~~~~~~~ 75 (261)
+.|||+||||+++|+.+|||+|||+||++||||+++ ++.+.++|++|++||++|+||.+|+.||+||++++..+
T Consensus 20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ---CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 579999999999999999999999999999999997 47888999999999999999999999999999887654
No 36
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.67 E-value=1.6e-17 Score=116.39 Aligned_cols=56 Identities=21% Similarity=0.234 Sum_probs=50.9
Q ss_pred CCCccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhh
Q psy2268 3 FNYYAVLGLTR-GASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRK 61 (261)
Q Consensus 3 ~d~y~~Lgv~~-~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r 61 (261)
.++|+||||++ +|+.+|||+|||+|++++|||++.++ +.|++|++||++|+++..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~---~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP---FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH---HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH---HHHHHHHHHHHHHhhhhhc
Confidence 36899999999 79999999999999999999997543 7999999999999998765
No 37
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.67 E-value=1.3e-17 Score=137.24 Aligned_cols=65 Identities=17% Similarity=0.304 Sum_probs=59.2
Q ss_pred CCCCcccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhcc
Q psy2268 2 GFNYYAVL------GLTR-GASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYG 68 (261)
Q Consensus 2 ~~d~y~~L------gv~~-~a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G 68 (261)
..|||+|| |+++ +|+.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||...
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 46999999 4665 9999999999999999999999976 6789999999999999999999999843
No 38
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=8.6e-15 Score=110.83 Aligned_cols=83 Identities=8% Similarity=0.038 Sum_probs=71.8
Q ss_pred CccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC-CC
Q psy2268 137 QDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-SS 215 (261)
Q Consensus 137 ~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~G 215 (261)
+-|+|+|+|++++++|||.||+.|++++|... +| .++|+||+|+++|++++++|+|.+..+ +|
T Consensus 5 ~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tl----dG------------~~~v~ip~g~~~G~~~rl~G~G~p~~~~~G 68 (109)
T 3i38_A 5 PLFDIVGHNLEIVLPLAPWEAALGAKVTVPTL----KE------------SILLTVPPGSQAGQRLRIKGKGLVSKTHTG 68 (109)
T ss_dssp CCCEEETTEEEEEEEECHHHHHHCEEEEECCS----SS------------CEEEEECTTCCTTCEEEETTCSCBCSSCBC
T ss_pred CCeEEECCEEEEEEEcCHHHHhCCCEEEEEcC----CC------------CEEEeeCCCcCcCeEEEECCccCCCCCCCc
Confidence 34788899999999999999999999999865 55 379999999999999999999998755 89
Q ss_pred cEEEEEEeccCCCeEEeCCc
Q psy2268 216 EVIVITKDKPHDVFWREGAD 235 (261)
Q Consensus 216 Dl~v~i~v~~h~~f~R~g~D 235 (261)
||||++.|.-+..+..+..+
T Consensus 69 DL~v~~~V~~P~~Ls~~q~~ 88 (109)
T 3i38_A 69 DLFAVIKIVMPTKPDEKARE 88 (109)
T ss_dssp CEEEEEEECCCSSCCHHHHH
T ss_pred CEEEEEEEECCCCCCHHHHH
Confidence 99999999988876544433
No 39
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2.7e-14 Score=110.14 Aligned_cols=83 Identities=12% Similarity=0.026 Sum_probs=69.6
Q ss_pred cccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCC--CCCCCEEEecCCCCCCCC---
Q psy2268 139 ITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPG--LPEHTVFKFPKEPLEYST--- 213 (261)
Q Consensus 139 ~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~--- 213 (261)
|+|+|+||+++++|||.||+.|++++|+.. +|. .++|+||+| +++|++++++|+|.+..+
T Consensus 2 F~R~G~DL~~~~~Isl~eAllG~~i~v~tl----dG~-----------~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~ 66 (121)
T 1xao_A 2 FKRDGDDLVYEAEIDLLTAIAGGEFALEHV----SGD-----------WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGG 66 (121)
T ss_dssp CEEETTEEEEEEEEEHHHHHHCEEEEEECT----TSC-----------EEEEEECTTSCCCTTCEEEETTCSCC------
T ss_pred ceEECCeEEEEEEcCHHHHhCCCEEEEecC----CCC-----------EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCC
Confidence 567888899999999999999999999865 662 589999999 999999999999998654
Q ss_pred CCcEEEEEEeccCCC--eEEeCCcE
Q psy2268 214 SSEVIVITKDKPHDV--FWREGADL 236 (261)
Q Consensus 214 ~GDl~v~i~v~~h~~--f~R~g~DL 236 (261)
+|||||++.|.-+.. ++.+..++
T Consensus 67 ~GDL~V~~~V~~P~~~~ls~~q~~~ 91 (121)
T 1xao_A 67 YGNLIIKFTIKFPENHFTSEENLKK 91 (121)
T ss_dssp CCCEEEEEEEECCCTTCSCHHHHHH
T ss_pred CCCEEEEEEEECCCCCCCCHHHHHH
Confidence 799999999998876 65544443
No 40
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=99.29 E-value=7.9e-12 Score=102.75 Aligned_cols=82 Identities=17% Similarity=0.096 Sum_probs=71.0
Q ss_pred CCccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCC---
Q psy2268 136 KQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYS--- 212 (261)
Q Consensus 136 ~~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~--- 212 (261)
.+-|+|+|+||+++++|||.||++|++++|+.. +|. .++|.||+|+++|++++++|+|.+..
T Consensus 85 h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tl----dG~-----------~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~ 149 (180)
T 2q2g_A 85 HPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTL----DNR-----------NLQIPIKEIVNPKTRKIVPNEGMPIKNQP 149 (180)
T ss_dssp CSSCEEETTEEEEEEEEEHHHHHHCEEEEEECT----TCC-----------EEEEEECSCCCTTCEEEETTCSCBCSSST
T ss_pred cccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCC----CCC-----------EEEEECCCccCCCEEEEECCcCCCcCCCC
Confidence 445889999999999999999999999999876 662 58899999999999999999999854
Q ss_pred C-CCcEEEEEEeccCCCeEEe
Q psy2268 213 T-SSEVIVITKDKPHDVFWRE 232 (261)
Q Consensus 213 ~-~GDl~v~i~v~~h~~f~R~ 232 (261)
+ +|||||++.|.-+..++.+
T Consensus 150 ~~~GDL~V~~~V~~P~~Ls~~ 170 (180)
T 2q2g_A 150 GQKGDLILEFDICFPKSLTPE 170 (180)
T ss_dssp TCBCCEEEEEEEECCSCCCHH
T ss_pred CCcCCEEEEEEEECCCCCCHH
Confidence 3 7999999999988765433
No 41
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=99.29 E-value=8.4e-12 Score=102.68 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=71.1
Q ss_pred CCccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCC---
Q psy2268 136 KQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYS--- 212 (261)
Q Consensus 136 ~~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~--- 212 (261)
.+-|+|+|+||+++++|||.||+.|++++|+.. +|. .++|.||+|+++|++++++|+|.+..
T Consensus 85 h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tl----dG~-----------~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~ 149 (181)
T 3agx_A 85 HNIFKRDGSDVIYPARISLREALCGCTVNVPTL----DGR-----------TIPVVFKDVIRPGMRRKVPGEGLPLPKTP 149 (181)
T ss_dssp CSSCEEETTEEEEEEEEEHHHHHHCEEEEEECT----TSC-----------EEEEEECSCCCTTCEEEETTCSCBCSSST
T ss_pred cccceeeCCcEEEEEEcCHHHHhCCCEEEeECC----CCC-----------EEEEECCCccCCCcEEEECCcCCCcCCCC
Confidence 445889999999999999999999999999866 662 58899999999999999999999864
Q ss_pred C-CCcEEEEEEeccCCCeEEe
Q psy2268 213 T-SSEVIVITKDKPHDVFWRE 232 (261)
Q Consensus 213 ~-~GDl~v~i~v~~h~~f~R~ 232 (261)
+ +|||||++.|.-+..++.+
T Consensus 150 ~~~GDL~V~~~V~~P~~ls~~ 170 (181)
T 3agx_A 150 EKRGDLIIEFEVIFPERIPQT 170 (181)
T ss_dssp TSBCCEEEEEEEECCSCCCHH
T ss_pred CCcCCEEEEEEEECCCCCCHH
Confidence 3 7999999999988765543
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.29 E-value=3.6e-12 Score=109.89 Aligned_cols=87 Identities=11% Similarity=0.053 Sum_probs=69.2
Q ss_pred CCccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCC--CCCCCEEEecCCCCCCCC
Q psy2268 136 KQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPG--LPEHTVFKFPKEPLEYST 213 (261)
Q Consensus 136 ~~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G--~~~G~~i~~~g~G~~~~~ 213 (261)
.+-|+|+|+||+++++|||.||++|++++|+.. +| +.++|+|||| +++|++++|+|+|.+..+
T Consensus 154 h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tl----dG-----------~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~ 218 (248)
T 1nlt_A 154 HKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHV----SG-----------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPK 218 (248)
T ss_dssp CSSCEEETTEEEEEEEEEHHHHHHCBCCEEECS----SS-----------CEEECCBCTTTTCSTTCEEEETTCSCBCSS
T ss_pred CccceeeCCEEEEEEEeCHHHHhcCCEEEEeCC----CC-----------CEEEEEeCCCCeeCCCeEEEEcCCCCccCC
Confidence 445899999999999999999999999999876 66 2589999999 999999999999998653
Q ss_pred ---CCcEEEEEEeccCCC--eEEeCCcEE
Q psy2268 214 ---SSEVIVITKDKPHDV--FWREGADLH 237 (261)
Q Consensus 214 ---~GDl~v~i~v~~h~~--f~R~g~DL~ 237 (261)
+|||||++.|.-+.. ++.+..+|+
T Consensus 219 ~~~~GDL~V~~~V~~P~~~~Ls~~q~~~l 247 (248)
T 1nlt_A 219 YGGYGNLIIKFTIKDPENHFTSEENLKKL 247 (248)
T ss_dssp SCSBCCEEEEEEEECCC------------
T ss_pred CCCcCCEEEEEEEECCCCCCCCHHHHHhh
Confidence 799999999998877 776665553
No 43
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=99.28 E-value=5e-12 Score=103.04 Aligned_cols=81 Identities=12% Similarity=0.108 Sum_probs=70.6
Q ss_pred CCccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC--
Q psy2268 136 KQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-- 213 (261)
Q Consensus 136 ~~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-- 213 (261)
.+-|+|+|+||+++++|||.||++|++++|+.. +|. .++|+||+|+++|++++++|+|.+..+
T Consensus 79 h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tl----dG~-----------~~~i~i~~~t~~g~~~rl~g~G~p~~~~~ 143 (170)
T 1c3g_A 79 HPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTI----DGR-----------TLPLSRVQPVQPSQTSTYPGQGMPTPKNP 143 (170)
T ss_dssp CSSEEEETTEEEEEECCBHHHHHHCEEEEEECS----SSC-----------EEEEEESSCCCTTCEEECTTCSCBCSSCT
T ss_pred CCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCC----CCC-----------EEEEECCCccCCCcEEEEeCCCCCcCCCC
Confidence 445889999999999999999999999999876 662 478999999999999999999998642
Q ss_pred --CCcEEEEEEeccCCCeEE
Q psy2268 214 --SSEVIVITKDKPHDVFWR 231 (261)
Q Consensus 214 --~GDl~v~i~v~~h~~f~R 231 (261)
+|||||++.|.-+..++.
T Consensus 144 ~~~GDL~V~~~V~~P~~Ls~ 163 (170)
T 1c3g_A 144 SQRGNLIVKYKVDYPISLND 163 (170)
T ss_dssp TSBCCEEEEECCBCCSSCCT
T ss_pred CCCCCEEEEEEEECCCCCCH
Confidence 699999999998876543
No 44
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.23 E-value=1.5e-11 Score=110.13 Aligned_cols=84 Identities=8% Similarity=0.040 Sum_probs=73.1
Q ss_pred CCccccCCCceEEEEEeehHhhhcCcEEEEEeEEEecCCceeeeeEEeeeEEEEEEecCCCCCCCEEEecCCCCCCCC-C
Q psy2268 136 KQDITLSSNQQVHTVVVSLEELYRGCVKLLTVPVQEIDPCSVQLNFINTSKIVHIKIKPGLPEHTVFKFPKEPLEYST-S 214 (261)
Q Consensus 136 ~~d~~~~g~di~~~l~vsl~e~~~G~~~~i~~~~~~~~G~~~~~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~-~ 214 (261)
.+-|+|+|+||+++++|||.||++|++++|+.. +| .++|+||+|+++|++++|+|+|.+..+ +
T Consensus 224 h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptL----dG------------~v~l~ip~gt~~g~~~rl~G~GmP~~~~r 287 (329)
T 3lz8_A 224 HPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTL----KE------------SILLTVPPGSQAGQRLRIKGKGLVSKTHT 287 (329)
T ss_dssp CSSCEEETTEEEEEEEECHHHHHHCEEEEECCS----SS------------CEEEEECTTCCTTCEEEETTCSCBCSSCB
T ss_pred CCccEEcCCcEEEEEECCHHHHcCCCeEEEECC----CC------------CEEEEECCCCCCCCEEEEcCCCCCCCCCC
Confidence 445889999999999999999999999999876 66 368999999999999999999998767 9
Q ss_pred CcEEEEEEeccCCCeEEeCCc
Q psy2268 215 SEVIVITKDKPHDVFWREGAD 235 (261)
Q Consensus 215 GDl~v~i~v~~h~~f~R~g~D 235 (261)
|||||++.|.-+.....+...
T Consensus 288 GDL~v~~~V~~P~~l~~~q~~ 308 (329)
T 3lz8_A 288 GDLFAVIKIVMPTKPDEKARE 308 (329)
T ss_dssp CCEEEEEEECCCSSCCHHHHH
T ss_pred CCEEEEEEEECCCCCCHHHHH
Confidence 999999999988766544433
No 45
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.17 E-value=1.9e-11 Score=110.76 Aligned_cols=64 Identities=36% Similarity=0.565 Sum_probs=55.7
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCch----hHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 3 FNYYAVLGLTRGASDYDIKMAFRKKAIQYNPERNNDV----KSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 3 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~hPd~~~~~----~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.++|++||+.+.++.++|+++|+++++++|||+.+.+ .++++|++|++||++|+||.+|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 4899999999999999999999999999999999864 488999999999999999999999997
No 46
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.92 E-value=8.6e-10 Score=75.16 Aligned_cols=51 Identities=14% Similarity=0.077 Sum_probs=44.9
Q ss_pred CccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchh
Q psy2268 5 YYAVLGLTRG---ASDYDIKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDK 58 (261)
Q Consensus 5 ~y~~Lgv~~~---a~~~eik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~ 58 (261)
-|.||||+++ ++.++|+++||+|...+|||+...+ ....+|++|++.|...
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~---yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF---YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH---HHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHHHHH
Confidence 4789999999 9999999999999999999998544 6677899999998654
No 47
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.79 E-value=2.9e-09 Score=80.29 Aligned_cols=37 Identities=16% Similarity=0.125 Sum_probs=33.8
Q ss_pred ccCCCeEEeCCcEEEEeecCHHHHhcCCeEEEeeeec
Q psy2268 224 KPHDVFWREGADLHMKKNVSLTPQERNQKYTTRMFTV 260 (261)
Q Consensus 224 ~~h~~f~R~g~DL~~~~~Isl~eAl~G~~~~i~tl~~ 260 (261)
++|+.|+|+|+||+++++|||.||++|+++.|+||..
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG 38 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKE 38 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSS
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCC
Confidence 6899999999999999999999999999999999864
No 48
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.76 E-value=0.003 Score=46.53 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=22.8
Q ss_pred CceEEEEEeehHhhhcCcEEEEEeE
Q psy2268 144 NQQVHTVVVSLEELYRGCVKLLTVP 168 (261)
Q Consensus 144 ~di~~~l~vsl~e~~~G~~~~i~~~ 168 (261)
.|+.++|.|||+|||+|++++|.+.
T Consensus 2 ~~~~~~l~vslee~~~G~~~~i~~~ 26 (104)
T 2ctt_A 2 SSGSSGMELTFNQAAKGVNKEFTVN 26 (104)
T ss_dssp CCCCCCCCCCCSSCCSSSCTTCCSS
T ss_pred CceEEEEEEEHHHHcCCCEEEEEee
Confidence 4588999999999999999999987
No 49
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=65.96 E-value=11 Score=25.59 Aligned_cols=54 Identities=20% Similarity=0.162 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCc---hhHHHHHHHHHHHHhhcch-hhhhhhhhhccch
Q psy2268 16 SDYDIKMAFRKKAIQYNPERNND---VKSQAMFTLICEAYEVLSD-KFRKAIYDQYGEE 70 (261)
Q Consensus 16 ~~~eik~ayr~la~~~hPd~~~~---~~a~~~f~~i~~Ay~~L~d-~~~r~~YD~~G~~ 70 (261)
-...++.+|+.+.+...|..... ..+..+|..-. +|..+.+ ..++.+|+.|-..
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi~~ 64 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFMHV 64 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHHHH
Confidence 45678999999888887877664 56667776555 7998865 6788899988543
No 50
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=58.01 E-value=18 Score=23.39 Aligned_cols=49 Identities=10% Similarity=0.224 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCchhHHHHHHHH---HHHHhhcch-hh-hhhhhhhcc
Q psy2268 18 YDIKMAFRKKAIQYNPERNNDVKSQAMFTLI---CEAYEVLSD-KF-RKAIYDQYG 68 (261)
Q Consensus 18 ~eik~ayr~la~~~hPd~~~~~~a~~~f~~i---~~Ay~~L~d-~~-~r~~YD~~G 68 (261)
+|..+||.+|.+...-|.+-. =++..+.| ..-|.+|.| |. +++.|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~ws--weqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWS--FSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCC--HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCc--HHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 577899999999876655532 22444455 347999997 65 778888874
No 51
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=51.74 E-value=30 Score=23.03 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHH--HHhhcch-hhhhhhhhhccc
Q psy2268 14 GASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICE--AYEVLSD-KFRKAIYDQYGE 69 (261)
Q Consensus 14 ~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~--Ay~~L~d-~~~r~~YD~~G~ 69 (261)
-++.+|.+++|++|....+-+-.-. ..+.+ .|.. -|.+|.+ ..+++.|+.|-.
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~tWe~~~~---~i~~DpRY~al~~~~eRk~~F~ey~~ 67 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNASWEQAMK---MIINDPRYSALAKLSEKKQAFNAYKV 67 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTCCHHHHHH---HHHTSGGGGGCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCCHHHHHH---HHccCccccccCCHHHHHHHHHHHHH
Confidence 5789999999999999876444332 33322 3332 6778876 466777877643
No 52
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A*
Probab=42.53 E-value=29 Score=26.07 Aligned_cols=39 Identities=5% Similarity=0.068 Sum_probs=27.5
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC--------CCcEEEEEEeccC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST--------SSEVIVITKDKPH 226 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~--------~GDl~v~i~v~~h 226 (261)
.+-.||.|+.+|+.|++.|.-.+... ..|+.++++++-+
T Consensus 6 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~dialHfnpRf~ 52 (138)
T 3zsj_A 6 YNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFN 52 (138)
T ss_dssp EEEECTTCCCTTEEEEEEEEECTTCCBEEEEEEETTEEEEEEEEEEE
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeccCCCEEEEEEeEcC
Confidence 45689999999999999996544332 3566666665543
No 53
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A*
Probab=42.16 E-value=38 Score=25.38 Aligned_cols=39 Identities=10% Similarity=0.042 Sum_probs=27.8
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC--------CCcEEEEEEeccC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST--------SSEVIVITKDKPH 226 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~--------~GDl~v~i~v~~h 226 (261)
..-.||.|+..|+.|++.|.-...++ ..|+.++++++-+
T Consensus 10 ~~~~i~~gl~~G~~i~I~G~v~~~~~~F~Inl~~~~dialHfnpRf~ 56 (138)
T 3nv1_A 10 FITTILGGLYPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFD 56 (138)
T ss_dssp EEEECTTCCCTTCEEEEEEEECTTCCBEEEEEEETTEEEEEEEEETT
T ss_pred EEeeCCCCCCCCCEEEEEEEECCCCCEEEEEcCcCCCEEEEEEEecC
Confidence 45678999999999999996544332 2377777766654
No 54
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=41.50 E-value=36 Score=25.51 Aligned_cols=40 Identities=10% Similarity=0.096 Sum_probs=27.6
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC-------C-----CcEEEEEEeccCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST-------S-----SEVIVITKDKPHD 227 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-------~-----GDl~v~i~v~~h~ 227 (261)
..-.||.|++.|+.|++.|.-....+ . .|+.+++++.-+.
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 56789999999999999986433222 1 3676766665543
No 55
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A*
Probab=39.10 E-value=68 Score=25.03 Aligned_cols=21 Identities=10% Similarity=0.330 Sum_probs=18.9
Q ss_pred EEEEecCCCCCCCEEEecCCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEP 208 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G 208 (261)
.++.|+.|+++|+.|.+.|.-
T Consensus 9 ~~~~L~~~L~~G~~i~I~G~v 29 (164)
T 2r0h_A 9 STVDLSEPLKDNGIIVFQSDK 29 (164)
T ss_dssp EEEECSSCCCTTCEEEEECSC
T ss_pred eeEECCCCccCCCEEEEEEEe
Confidence 478999999999999999974
No 56
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=35.12 E-value=79 Score=20.08 Aligned_cols=42 Identities=14% Similarity=0.287 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+.+|...+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 14 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH----NAELSKMLGKSWKALTLAEKRPFVEE 55 (71)
T ss_dssp HHHHHHHHHTTCTTSC----HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4566777777888776 34777888999999998877665554
No 57
>2d6m_A Galectin-9, lectin, galactose binding, soluble 9; beta sandwich, carbohydrate binding protein, sugar binding protein; HET: LBT; 1.60A {Mus musculus} PDB: 2d6l_X 2d6k_A* 2d6n_A* 2d6p_A* 2d6o_X*
Probab=34.94 E-value=54 Score=25.19 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=27.6
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC-------C----CcEEEEEEeccC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST-------S----SEVIVITKDKPH 226 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-------~----GDl~v~i~v~~h 226 (261)
....||.|+..|+.|++.|.-..... . .|+.+++++.-+
T Consensus 19 f~~~i~~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~~~~dialHfnpRf~ 68 (159)
T 2d6m_A 19 FTGPIQGGLQEGLQVTLQGTTKSFAQRFVVNFQNSFNGNDIAFHFNPRFE 68 (159)
T ss_dssp EEEECTTCCCTTCEEEEEEEECSSCCBEEEEEESSTTCSCEEEEEEEECC
T ss_pred EEEECCCCCccCCEEEEEEEECCCCCEEEEEEecCCCCCCEEEEEEEEEC
Confidence 56788999999999999985433322 2 377777777655
No 58
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=34.85 E-value=44 Score=25.52 Aligned_cols=39 Identities=8% Similarity=0.129 Sum_probs=27.2
Q ss_pred EEEEecCCCCCCCEEEecCC-CCCCCC---------CCcEEEEEEeccC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKE-PLEYST---------SSEVIVITKDKPH 226 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~-G~~~~~---------~GDl~v~i~v~~h 226 (261)
..+.||.|+..|+.|++.|. =....+ .+|+.++++++-+
T Consensus 9 ~~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~ 57 (150)
T 2wkk_A 9 NQVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPG 57 (150)
T ss_dssp EEEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETT
T ss_pred cceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecC
Confidence 46789999999999999993 332221 2377777776654
No 59
>2yro_A Galectin-8; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.77 E-value=55 Score=25.09 Aligned_cols=21 Identities=5% Similarity=0.018 Sum_probs=13.5
Q ss_pred EEEEecCCCCCCCEEEecCCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEP 208 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G 208 (261)
....||.|+..|+.|++.|.-
T Consensus 19 f~~~ip~gl~~G~~i~I~G~v 39 (155)
T 2yro_A 19 FAARLNTPMGPGRTVVVKGEV 39 (155)
T ss_dssp EEEECSSCCCTTCEEEEEEEE
T ss_pred EeeecCCCCccCCEEEEEEEE
Confidence 345666777777777776643
No 60
>3i8t_A Galectin-4; S-type lectin, carbohydrate binding, molecular recognition, sugar binding protein; HET: LBT; 2.10A {Mus musculus} PDB: 2dyc_A
Probab=31.07 E-value=71 Score=24.73 Aligned_cols=40 Identities=13% Similarity=0.010 Sum_probs=26.9
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC------------CCcEEEEEEeccCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST------------SSEVIVITKDKPHD 227 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~------------~GDl~v~i~v~~h~ 227 (261)
..-.||.|++.|+.|++.|.-..... ..|+.++++++-+.
T Consensus 31 y~~~ipggL~~G~~I~I~G~v~~~a~rF~INl~~g~~~~~dIalHfnpRF~~ 82 (164)
T 3i8t_A 31 YKRPIPGGLSVGMSVYIQGMAKENMRRFHVNFAVGQDDGADVAFHFNPRFDG 82 (164)
T ss_dssp EEEECTTCCCTTCEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEECSS
T ss_pred eeeeCCCCCCCCCEEEEEEEECCCCCEEEEEeccCCCCCCCEEEEEEeeeCC
Confidence 45678888999999988885433221 12777777776654
No 61
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=29.61 E-value=92 Score=23.12 Aligned_cols=43 Identities=19% Similarity=0.115 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhccc
Q psy2268 20 IKMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYGE 69 (261)
Q Consensus 20 ik~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G~ 69 (261)
+-+.++.....+.++..+ +.|..|.+-| +.||.-+..||++|.
T Consensus 82 l~~~h~~~l~~~~~~~s~-----e~~~~L~~mY--v~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 82 AAEDHRQGIARNHYDCGY-----EMHTCLGEMY--VSDERFTRNIDAAKP 124 (143)
T ss_dssp HHHHHHHHHHHHSSCCCH-----HHHHHHHHHT--TSTHHHHHHHGGGST
T ss_pred HHHHHHHHHHHhCCCCCH-----HHHHHHHHHH--hcCHHHHHhHcccCh
Confidence 444455444343444432 5566666666 478999999999853
No 62
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.17 E-value=97 Score=20.82 Aligned_cols=45 Identities=18% Similarity=0.141 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhcc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYG 68 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G 68 (261)
.+.+|...+.-||+.. ...+..+.+.+.|..|++.++....+..-
T Consensus 17 ~~e~R~~ik~~~P~~~---~~~eisK~lge~Wk~ls~eeK~~y~~~A~ 61 (81)
T 2d7l_A 17 LEENRSNILSDNPDFS---DEADIIKEGMIRFRVLSTEERKVWANKAK 61 (81)
T ss_dssp HHHHHHHHHHHCTTCC---SHHHHHHHHHHHHSSSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCc---hhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4556777778899875 13477888999999999888876666533
No 63
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=28.50 E-value=1.1e+02 Score=20.15 Aligned_cols=43 Identities=12% Similarity=0.295 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+|...+.-||+.+ ..+..+.|.+.|..|++.++...++..
T Consensus 16 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~eeK~~y~~~A 58 (81)
T 1i11_A 16 AKDERRKILQAFPDMH----NSNISKILGSRWKAMTNLEKQPYYEEQ 58 (81)
T ss_dssp HHHHHHHHHTTCSSCC----HHHHHHHHHHHHTTSCSGGGHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHhhhhhCCHHHHHHHHHHH
Confidence 3456666666788765 347788899999999988776665553
No 64
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=28.38 E-value=1.2e+02 Score=19.54 Aligned_cols=42 Identities=14% Similarity=0.241 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+.+|...+.-||+.+.. +..+.|.+.|..|++.++....+.
T Consensus 16 ~~~~r~~~~~~~p~~~~~----eisk~lg~~Wk~ls~~eK~~y~~~ 57 (76)
T 1hry_A 16 SRDQRRKMALENPRMRNS----EISKQLGYQWKMLTEAEKWPFFQE 57 (76)
T ss_dssp HHHHHHHHHHHCSCCSSS----HHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCHH----HHHHHHHhHHHhCCHHHHHHHHHH
Confidence 345666667778987542 566788999999998777655554
No 65
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=28.30 E-value=1.3e+02 Score=19.81 Aligned_cols=43 Identities=14% Similarity=0.264 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+|...+.-||+.. ..+..+.|.+.|..|++.++....+..
T Consensus 18 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~A 60 (83)
T 3f27_D 18 AKDERKRLAQQNPDLH----NAELSKMLGKSWKALTLAEKRPFVEEA 60 (83)
T ss_dssp HHHHHHHHHHHCSSSC----HHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4566777777899876 347778889999999988776655543
No 66
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=27.51 E-value=30 Score=26.13 Aligned_cols=30 Identities=7% Similarity=0.068 Sum_probs=25.4
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCC
Q psy2268 6 YAVLGLTRGASDYDIKMAFRKKAIQYNPER 35 (261)
Q Consensus 6 y~~Lgv~~~a~~~eik~ayr~la~~~hPd~ 35 (261)
+..|-|....+.+|++++-..+..++||+=
T Consensus 35 l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 35 LKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 567778888899999999999999999963
No 67
>3ap9_A Galectin-8; beta-sandwich, carbohydrate/sugar binding, lacto-N fucopentaose III, sugar binding protein; HET: GAL FUC NAG BGC; 1.33A {Homo sapiens} PDB: 3ap4_A 3ap5_A* 3ap6_A* 3ap7_A* 3apb_A 2yv8_A 2yxs_A*
Probab=27.38 E-value=78 Score=24.06 Aligned_cols=39 Identities=10% Similarity=-0.025 Sum_probs=27.3
Q ss_pred EEEEecCCCCCCCEEEecCCCCCCCC-------C-------CcEEEEEEeccC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPLEYST-------S-------SEVIVITKDKPH 226 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~~~~~-------~-------GDl~v~i~v~~h 226 (261)
....||.|+..|+.|++.|.-..... . +|+.+++..+-+
T Consensus 19 f~~~i~~gl~~G~~i~I~G~v~~~~~rF~Inl~~g~~~~~~~dialHfnpRf~ 71 (154)
T 3ap9_A 19 FVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSVKPRADVAFHFNPRFK 71 (154)
T ss_dssp EEEECCSCCCTTCEEEEEEECCTTCSBEEEEEEEEEEETTEEEEEEEEEEECS
T ss_pred EEEECCCCCccCCEEEEEEEECCCCCEEEEEEeeCCCCCCCCCEEEEEEeEEC
Confidence 56679999999999999996543322 1 366666666544
No 68
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=27.24 E-value=1.3e+02 Score=19.84 Aligned_cols=43 Identities=19% Similarity=0.205 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+|...+.-||+.+. .+..+.|.+.|.-|++.++....+..
T Consensus 19 ~~~~r~~~~~~~p~~~~----~eisk~lg~~Wk~ls~~eK~~y~~~A 61 (82)
T 1wz6_A 19 CKRHRSLVRQEHPRLDN----RGATKILADWWAVLDPKEKQKYTDMA 61 (82)
T ss_dssp HHHHHHHHHHHCSSSCT----THHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH----HHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 45667777778898653 26677889999999987776655553
No 69
>1ueb_A EF-P, TT0860, elongation factor P; beta barrel, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.65A {Thermus thermophilus} SCOP: b.34.5.2 b.40.4.5 b.40.4.5 PDB: 3huw_V 3huy_V
Probab=26.51 E-value=73 Score=25.27 Aligned_cols=19 Identities=11% Similarity=0.074 Sum_probs=16.9
Q ss_pred EEEEecCCCCCCCEEEecC
Q psy2268 188 VHIKIKPGLPEHTVFKFPK 206 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g 206 (261)
+.|.||.=+..|++|++.-
T Consensus 157 ~~v~VP~fi~~Gd~I~vdT 175 (184)
T 1ueb_A 157 AVVQVPLFVEPGEVIKVDT 175 (184)
T ss_dssp CEEEEETTCCTTCEEEEET
T ss_pred CEEEeCCcCcCCCEEEEEC
Confidence 6799999999999999864
No 70
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=26.06 E-value=1.4e+02 Score=20.17 Aligned_cols=42 Identities=10% Similarity=0.124 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+.+|...+.-||+.+ ..+..+.|.+.|.-|++.++....+.
T Consensus 19 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~eeK~~Y~~~ 60 (92)
T 2crj_A 19 LNERREQIRTRHPDLP----FPEITKMLGAEWSKLQPAEKQRYLDE 60 (92)
T ss_dssp HHHHHHHHHHHCTTCC----HHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3456666777788865 34777889999999998877665554
No 71
>2dod_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=25.78 E-value=1.5e+02 Score=20.17 Aligned_cols=55 Identities=20% Similarity=0.184 Sum_probs=38.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCc-hhHHHHHHHHHH--HHhhcchhhhhhhhhhccchh
Q psy2268 14 GASDYDIKMAFRKKAIQYNPERNND-VKSQAMFTLICE--AYEVLSDKFRKAIYDQYGEEN 71 (261)
Q Consensus 14 ~a~~~eik~ayr~la~~~hPd~~~~-~~a~~~f~~i~~--Ay~~L~d~~~r~~YD~~G~~~ 71 (261)
.++.+|-+++|+.|...++-+-.-. ..+ ...|.. -|.+|....+|..|+.|=.+-
T Consensus 13 ~~t~eea~~~Fk~LL~e~~V~p~~tWe~~---~~~i~~DpRY~aL~~~eRK~~F~~y~~~r 70 (82)
T 2dod_A 13 IVPLEARMKQFKDMLLERGVSAFSTWEKE---LHKIVFDPRYLLLNPKERKQVFDQYVKTR 70 (82)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCSSSCHHHH---HHHHHTCSGGGTSCHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHcCcCCCCCHHHH---HHHHccCCccccCCHHHHHHHHHHHHHHH
Confidence 4688999999999999886555432 222 233433 577887677889999886443
No 72
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.38 E-value=1.3e+02 Score=20.46 Aligned_cols=42 Identities=17% Similarity=0.169 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+..|...+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 19 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~eeK~~y~~~ 60 (92)
T 2cs1_A 19 VQDHRPQFLIENPKTS----LEDATLQIEELWKTLSEEEKLKYEEK 60 (92)
T ss_dssp HHHHHHHHHHHCCSSC----HHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3455666677788875 34778889999999998877665554
No 73
>2zhn_A Galectin-9; beta sandwich, carbohydrate binding protein, sugar protein; HET: NAG GAL; 1.30A {Homo sapiens} PDB: 2eak_A* 2eal_A* 2zhk_A* 2zhm_A* 2zhl_A* 2yy1_A* 3lsd_A 3lse_A*
Probab=25.32 E-value=96 Score=23.35 Aligned_cols=39 Identities=10% Similarity=0.064 Sum_probs=26.1
Q ss_pred EEEEecCCCCCCCEEEecCCC-CCCCC-------C----CcEEEEEEeccC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEP-LEYST-------S----SEVIVITKDKPH 226 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G-~~~~~-------~----GDl~v~i~v~~h 226 (261)
....||.|+..|+.|++.|.- ..... . +|+.++++.+-+
T Consensus 17 ~~~~i~~gl~~G~~i~I~G~~~~~~~~rF~Inl~~g~~~~dialHfnpRf~ 67 (148)
T 2zhn_A 17 FSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNPRFE 67 (148)
T ss_dssp EEEECTTCCCTTCEEEEEEEECSSSCSBEEEEEESSSSSSCEEEEEEEECS
T ss_pred EEEECCCCCccCCEEEEEEEECCCCCCEEEEEEeeCCCCCCEEEEEEEEEC
Confidence 466789999999999999843 12211 1 477777776654
No 74
>1x50_A Galectin-4; GAL-BIND lectin, sugar binding, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.04 E-value=61 Score=25.08 Aligned_cols=22 Identities=9% Similarity=0.036 Sum_probs=15.6
Q ss_pred EEEEecCCCCCCCEEEecCCCC
Q psy2268 188 VHIKIKPGLPEHTVFKFPKEPL 209 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g~G~ 209 (261)
....||.|+..|+.|++.|.-.
T Consensus 29 f~~~ip~gL~~G~~i~I~G~v~ 50 (164)
T 1x50_A 29 YFGRLQGGLTARRTIIIKGYVP 50 (164)
T ss_dssp EEEECSSCSCTTEEEEEEEECC
T ss_pred EEeeCCCCCccCCEEEEEEEEC
Confidence 4567777778888887777543
No 75
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=24.91 E-value=1.3e+02 Score=20.38 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhcc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQYG 68 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~G 68 (261)
.+.+|...+.-||+.+ ..+..+.|.+.|.-|++.++....+..-
T Consensus 32 ~~~~r~~~k~~~P~~~----~~eisk~lg~~Wk~ls~eeK~~Y~~~A~ 75 (90)
T 1wgf_A 32 SEEKRRQLQEERPELS----ESELTRLLARMWNDLSEKKKAKYKAREA 75 (90)
T ss_dssp HHHTHHHHHHHCTTSC----HHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3455666677788854 3477788999999999887776666543
No 76
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=24.17 E-value=1.5e+02 Score=20.82 Aligned_cols=43 Identities=12% Similarity=0.237 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+|...+.-||+.. ..+..+.|.+.|..|++.++....+..
T Consensus 41 ~~~~r~~~k~~~P~~~----~~eisk~lg~~Wk~ls~eeK~~Y~~~A 83 (106)
T 4euw_A 41 AQAARRKLADQYPHLH----NAELSKTLGKLWRLLNESEKRPFVEEA 83 (106)
T ss_dssp HHHHHHHHHHHCTTSC----HHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4566777777888765 247788899999999988777666553
No 77
>3b9c_A HSPC159; beta sandwich, unknown function; 1.90A {Homo sapiens} PDB: 2jj6_A
Probab=23.55 E-value=86 Score=23.59 Aligned_cols=24 Identities=13% Similarity=-0.189 Sum_probs=19.6
Q ss_pred EEEEEecCCCCCCCEEEecCCCCC
Q psy2268 187 IVHIKIKPGLPEHTVFKFPKEPLE 210 (261)
Q Consensus 187 ~~~V~Ip~G~~~G~~i~~~g~G~~ 210 (261)
...-.||.|+.+|+.|++.|.-..
T Consensus 11 ~~~~~i~~gl~~G~~i~I~G~v~~ 34 (144)
T 3b9c_A 11 PFCGHIKGGMRPGKKVLVMGIVDL 34 (144)
T ss_dssp CEEEECTTCCCTTCEEEEEEEECS
T ss_pred eEcccCCCCCccCCEEEEEEEECC
Confidence 356789999999999999996443
No 78
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=23.33 E-value=1.5e+02 Score=19.36 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 22 MAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
+.+|...+.-||+.+ ..+..+.|.+.|.-|++.++....+..
T Consensus 15 ~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~eeK~~y~~~A 56 (80)
T 1gt0_D 15 RGQRRKMAQENPKMH----NSEISKRLGAEWKLLSETEKRPFIDEA 56 (80)
T ss_dssp HHHHHHHHTTSTTSC----HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC----HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 455666666788754 346778899999999988776665553
No 79
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=23.00 E-value=1.5e+02 Score=19.86 Aligned_cols=42 Identities=12% Similarity=0.280 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+.+|...+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 29 ~~~~r~~~~~~~P~~~----~~eisk~lg~~Wk~ls~eeK~~y~~~ 70 (87)
T 2e6o_A 29 AKKYRVEYTQMYPGKD----NRAISVILGDRWKKMKNEERRMYTLE 70 (87)
T ss_dssp HHHTHHHHHHHCTTSC----HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 4456666777788864 34677889999999998777655554
No 80
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=22.60 E-value=1.6e+02 Score=19.01 Aligned_cols=42 Identities=12% Similarity=0.259 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+.+|...+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 14 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (79)
T 3u2b_C 14 SQIERRKIMEQSPDMH----NAEISKRLGKRWKLLKDSDKIPFIQE 55 (79)
T ss_dssp HHHHHHHHHTTSTTSC----HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCC----HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3456666677788765 34777888999999998777665554
No 81
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=21.94 E-value=1.7e+02 Score=20.25 Aligned_cols=42 Identities=7% Similarity=0.109 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+.+|...+.-||+.. ..+.-+.|.+.|.-|++.++....+.
T Consensus 29 ~~~~r~~i~~~~P~~~----~~eisk~lg~~Wk~ls~eeK~~Y~~~ 70 (102)
T 2co9_A 29 FRDTQAAIKGQNPNAT----FGEVSKIVASMWDGLGEEQKQVYKKK 70 (102)
T ss_dssp HHHHHHHHHHHCTTSC----HHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHccCCHHHHHHHHHH
Confidence 3455666667788865 34777888999999998877665554
No 82
>1yby_A Translation elongation factor P; conserved hypothetical protein, structural genomics, PSI, protein structure initiative; 1.95A {Clostridium thermocellum}
Probab=21.54 E-value=71 Score=26.09 Aligned_cols=19 Identities=11% Similarity=0.177 Sum_probs=16.9
Q ss_pred EEEEecCCCCCCCEEEecC
Q psy2268 188 VHIKIKPGLPEHTVFKFPK 206 (261)
Q Consensus 188 ~~V~Ip~G~~~G~~i~~~g 206 (261)
+.|.||.=+..|++|++.-
T Consensus 188 ~~v~VP~FI~~Gd~I~VdT 206 (215)
T 1yby_A 188 ASIKVPLFVNKGDIIRIDT 206 (215)
T ss_dssp CEEEEETTCCTTCEEEEET
T ss_pred cEEEeCCcEeCCCEEEEEC
Confidence 6799999999999999864
No 83
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=21.52 E-value=1.8e+02 Score=19.22 Aligned_cols=43 Identities=12% Similarity=0.193 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+|...+.-||+.+ ..+..+.|.+.|.-|++.++....+..
T Consensus 16 ~~~~r~~~~~~~P~~~----~~eisk~lg~~Wk~ls~eeK~~y~~~A 58 (85)
T 1j46_A 16 SRDQRRKMALENPRMR----NSEISKQLGYQWKMLTEAEKWPFFQEA 58 (85)
T ss_dssp HHHHHHHHHHHSTTSC----HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 3456666667788765 346778899999999987776555543
No 84
>2lef_A LEF-1 HMG, protein (lymphoid enhancer-binding factor); LEF1, HMG, TCR-A, transcription factor; HET: DNA; NMR {Mus musculus} SCOP: a.21.1.1
Probab=21.40 E-value=1.9e+02 Score=19.22 Aligned_cols=43 Identities=14% Similarity=0.217 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhhc
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQY 67 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~~ 67 (261)
.+.+|...+.-||+.+ ..+..+.|.+.|..|++.++....+..
T Consensus 14 ~~~~r~~~~~~~P~~~----~~eisk~lg~~Wk~ls~eeK~~y~~~A 56 (86)
T 2lef_A 14 MKEMRANVVAESTLKE----SAAINQILGRRWHALSREEQAKYYELA 56 (86)
T ss_dssp HHHHHHHHHHHSSCCC----HHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3456666667788865 346778899999999987776555543
No 85
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.32 E-value=1.6e+02 Score=19.65 Aligned_cols=43 Identities=16% Similarity=0.175 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 22 MAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
+..|...+.-||+...+ ..+..+.|.+.|..|++.++....+.
T Consensus 28 ~~~r~~~k~~~p~~~~~--~~eisk~lg~~Wk~ls~~eK~~y~~~ 70 (86)
T 2eqz_A 28 QTCREEHKKKNPEVPVN--FAEFSKKCSERWKTMSGKEKSKFDEM 70 (86)
T ss_dssp HHHHHHHHHHCTTSCCC--HHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 45566666778887531 24777889999999998877665554
No 86
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=21.21 E-value=1.7e+02 Score=18.80 Aligned_cols=42 Identities=10% Similarity=0.063 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
.+.+|...+.-||+.+ ..+..+.|.+.|..|++.++....+.
T Consensus 18 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~~eK~~y~~~ 59 (77)
T 1hme_A 18 CSEYRPKIKGEHPGLS----IGDVAKKLGEMWNNTAADDKQPYEKK 59 (77)
T ss_dssp HHHHHHHHHHHCTTCC----HHHHHHHHHHHHHHSCGGGSHHHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3455666667788765 34778889999999998776655544
No 87
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=21.06 E-value=1.6e+02 Score=18.57 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=29.2
Q ss_pred HHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhhh
Q psy2268 23 AFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYDQ 66 (261)
Q Consensus 23 ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD~ 66 (261)
..|...+.-||+...+ ..+..+.|.+.|..|++.++....+.
T Consensus 15 ~~r~~~~~~~p~~~~~--~~eisk~lg~~Wk~ls~~eK~~y~~~ 56 (71)
T 1ckt_A 15 TCREEHKKKHPDASVN--FSEFSKKCSERWKTMSAKEKGKFEDM 56 (71)
T ss_dssp HHHHHHHHHCTTCCCC--HHHHHHHHHHHHHTCCTTTSHHHHHH
T ss_pred HHHHHHHHHCCCCCCc--HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 4555566678987531 24777889999999998876655544
No 88
>3ech_C 25-MER fragment of protein ARMR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa}
Probab=20.55 E-value=23 Score=18.07 Aligned_cols=16 Identities=38% Similarity=0.642 Sum_probs=11.1
Q ss_pred hcchhhhhhhhhhccc
Q psy2268 54 VLSDKFRKAIYDQYGE 69 (261)
Q Consensus 54 ~L~d~~~r~~YD~~G~ 69 (261)
-|....+|..+|.||+
T Consensus 7 ~lrr~arrnawdly~e 22 (25)
T 3ech_C 7 QLRRAARRNAWDLYGE 22 (26)
T ss_dssp HHHHHHHHTHHHHHHS
T ss_pred HHHHHHHHhHHHHHHH
Confidence 4555667788888876
No 89
>3nm9_A HMG-D, high mobility group protein D; DNA bending, non-sequence-specific, HMG chromosomal protein; HET: DNA; 2.85A {Drosophila melanogaster} SCOP: a.21.1.1 PDB: 1e7j_A* 1hma_A 1qrv_A*
Probab=20.24 E-value=1.8e+02 Score=18.59 Aligned_cols=38 Identities=16% Similarity=0.161 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhCCCCCCchhHHHHHHHHHHHHhhcchhhhhhhhh
Q psy2268 21 KMAFRKKAIQYNPERNNDVKSQAMFTLICEAYEVLSDKFRKAIYD 65 (261)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~YD 65 (261)
.+.+|...+.-||+.. ..+..+.|.+.|..|++ |..|.
T Consensus 15 ~~~~r~~~~~~~p~~~----~~eisk~lg~~Wk~ls~---K~~y~ 52 (73)
T 3nm9_A 15 LNSARESIKRENPGIK----VTEVAKRGGELWRAMKD---KSEWE 52 (73)
T ss_dssp HHHHHHHHHHHSSSCC----HHHHHHHHHHHHHHCSC---CHHHH
T ss_pred HHHHHHHHHHHCCCCC----HHHHHHHHHHHHHcCCc---hHHHH
Confidence 3456666777888875 24777888999999987 55554
Done!