Query psy227
Match_columns 139
No_of_seqs 110 out of 469
Neff 5.4
Searched_HMMs 13730
Date Fri Aug 16 20:24:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy227.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/227hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ansa_ g.11.1.1 (A:) Neurotox 12.4 27 0.0019 17.2 0.4 6 68-73 7-12 (27)
2 d1shpa_ g.8.1.1 (A:) Trypsin i 9.2 42 0.0031 18.7 0.6 10 66-75 30-39 (55)
3 d1x61a1 g.39.1.3 (A:8-34) Thyr 8.9 45 0.0033 16.3 0.5 7 70-76 2-8 (27)
4 d1bika2 g.8.1.1 (A:79-134) Bik 8.4 47 0.0034 18.6 0.5 10 66-75 31-40 (56)
5 d1aapa_ g.8.1.1 (A:) Alzheimer 7.9 51 0.0037 18.4 0.5 12 65-76 31-42 (56)
6 d1g6xa_ g.8.1.1 (A:) Pancreati 7.6 53 0.0039 18.4 0.5 11 66-76 32-42 (58)
7 d1dtxa_ g.8.1.1 (A:) alpha-Den 7.4 54 0.0039 18.5 0.5 10 66-75 34-43 (59)
8 d1zr0b1 g.8.1.1 (B:1A-59) Tiss 7.3 56 0.0041 18.7 0.5 10 66-75 36-45 (63)
9 d1bika1 g.8.1.1 (A:25-78) Biku 6.9 61 0.0044 17.9 0.5 10 66-75 29-38 (54)
10 d1ktha_ g.8.1.1 (A:) Collagen 6.9 55 0.004 18.4 0.3 11 66-76 32-42 (58)
No 1
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=12.42 E-value=27 Score=17.21 Aligned_cols=6 Identities=67% Similarity=1.974 Sum_probs=4.7
Q ss_pred cccCCC
Q psy227 68 QWGGCG 73 (139)
Q Consensus 68 ~WgGCs 73 (139)
.||||-
T Consensus 7 ywggcp 12 (27)
T d1ansa_ 7 YWGGCP 12 (27)
T ss_dssp TTTTCS
T ss_pred cccCCc
Confidence 599993
No 2
>d1shpa_ g.8.1.1 (A:) Trypsin inhibitor {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]}
Probab=9.21 E-value=42 Score=18.70 Aligned_cols=10 Identities=60% Similarity=1.491 Sum_probs=8.2
Q ss_pred CccccCCCcc
Q psy227 66 SFQWGGCGDN 75 (139)
Q Consensus 66 ~~~WgGCsdn 75 (139)
.|.|+||.-|
T Consensus 30 ~F~y~GC~GN 39 (55)
T d1shpa_ 30 PFIYGGCGGN 39 (55)
T ss_dssp EEECCSTTCC
T ss_pred eeEcCCccCC
Confidence 4789999866
No 3
>d1x61a1 g.39.1.3 (A:8-34) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.88 E-value=45 Score=16.31 Aligned_cols=7 Identities=71% Similarity=1.882 Sum_probs=4.7
Q ss_pred cCCCcch
Q psy227 70 GGCGDNV 76 (139)
Q Consensus 70 gGCsdnV 76 (139)
|||+++|
T Consensus 2 ggcgedv 8 (27)
T d1x61a1 2 GGCGEDV 8 (27)
T ss_dssp SSSCSCC
T ss_pred CCccccc
Confidence 5777665
No 4
>d1bika2 g.8.1.1 (A:79-134) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.44 E-value=47 Score=18.60 Aligned_cols=10 Identities=50% Similarity=1.212 Sum_probs=8.1
Q ss_pred CccccCCCcc
Q psy227 66 SFQWGGCGDN 75 (139)
Q Consensus 66 ~~~WgGCsdn 75 (139)
.|.|+||.-|
T Consensus 31 ~F~y~GC~GN 40 (56)
T d1bika2 31 LFPYGGCQGN 40 (56)
T ss_dssp EEEECSSSCC
T ss_pred eeEcCCeeCC
Confidence 4789999866
No 5
>d1aapa_ g.8.1.1 (A:) Alzheimer's amyloid B-protein precursor, APPI {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.93 E-value=51 Score=18.43 Aligned_cols=12 Identities=50% Similarity=1.160 Sum_probs=9.0
Q ss_pred CCccccCCCcch
Q psy227 65 NSFQWGGCGDNV 76 (139)
Q Consensus 65 ~~~~WgGCsdnV 76 (139)
..|.|+||.-|-
T Consensus 31 ~~F~y~GCgGN~ 42 (56)
T d1aapa_ 31 APFFYGGCGGNR 42 (56)
T ss_dssp EEEEECSSSCCS
T ss_pred eeeEcCCccCCc
Confidence 347899998763
No 6
>d1g6xa_ g.8.1.1 (A:) Pancreatic trypsin inhibitor, BPTI {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.61 E-value=53 Score=18.39 Aligned_cols=11 Identities=36% Similarity=1.008 Sum_probs=8.6
Q ss_pred CccccCCCcch
Q psy227 66 SFQWGGCGDNV 76 (139)
Q Consensus 66 ~~~WgGCsdnV 76 (139)
.|.|+||+-|-
T Consensus 32 ~F~y~GC~gN~ 42 (58)
T d1g6xa_ 32 TFVYGGCRAKR 42 (58)
T ss_dssp EEEECSSSCCS
T ss_pred eeEcCCccCCc
Confidence 47899998763
No 7
>d1dtxa_ g.8.1.1 (A:) alpha-Dendrotoxin {Green mamba (Dendroaspis angusticeps) [TaxId: 8618]}
Probab=7.44 E-value=54 Score=18.49 Aligned_cols=10 Identities=60% Similarity=1.694 Sum_probs=8.0
Q ss_pred CccccCCCcc
Q psy227 66 SFQWGGCGDN 75 (139)
Q Consensus 66 ~~~WgGCsdn 75 (139)
.|.|+||+-|
T Consensus 34 ~F~y~GCgGN 43 (59)
T d1dtxa_ 34 RFDWSGCGGN 43 (59)
T ss_dssp EEEECSSCCC
T ss_pred eeEcCCccCC
Confidence 4789999866
No 8
>d1zr0b1 g.8.1.1 (B:1A-59) Tissue factor pathway inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.27 E-value=56 Score=18.69 Aligned_cols=10 Identities=50% Similarity=1.248 Sum_probs=8.1
Q ss_pred CccccCCCcc
Q psy227 66 SFQWGGCGDN 75 (139)
Q Consensus 66 ~~~WgGCsdn 75 (139)
.|.|+||+-|
T Consensus 36 ~F~y~GCgGN 45 (63)
T d1zr0b1 36 QFLYGGCEGN 45 (63)
T ss_dssp EEEECSSCCC
T ss_pred eeEcCCccCC
Confidence 4789999866
No 9
>d1bika1 g.8.1.1 (A:25-78) Bikunin from inter-alpha-inhibitor complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.88 E-value=61 Score=17.95 Aligned_cols=10 Identities=60% Similarity=1.345 Sum_probs=8.1
Q ss_pred CccccCCCcc
Q psy227 66 SFQWGGCGDN 75 (139)
Q Consensus 66 ~~~WgGCsdn 75 (139)
.|.|+||.-|
T Consensus 29 ~F~Y~GC~GN 38 (54)
T d1bika1 29 TFQYGGCMGN 38 (54)
T ss_dssp EEEECSSSCC
T ss_pred eeEeCCccCC
Confidence 4789999866
No 10
>d1ktha_ g.8.1.1 (A:) Collagen type VI (domain C5 from alpha 3 chain) {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.86 E-value=55 Score=18.36 Aligned_cols=11 Identities=55% Similarity=1.256 Sum_probs=8.5
Q ss_pred CccccCCCcch
Q psy227 66 SFQWGGCGDNV 76 (139)
Q Consensus 66 ~~~WgGCsdnV 76 (139)
.|.|+||+-|-
T Consensus 32 ~F~y~GCgGN~ 42 (58)
T d1ktha_ 32 RFWYGGCGGNE 42 (58)
T ss_dssp EEEECSBSCCS
T ss_pred eeEeCCccCCc
Confidence 47899998763
Done!