BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2272
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RA42|IF1AX_PONAB Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo
abelii GN=EIF1AX PE=2 SV=3
Length = 144
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEAMCFDG KRLCHIRGKLRKKVWIN DIIL+GLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++I+F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEIQF 131
>sp|Q8BMJ3|IF1AX_MOUSE Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus
musculus GN=Eif1ax PE=2 SV=3
Length = 144
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEAMCFDG KRLCHIRGKLRKKVWIN DIIL+GLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++I+F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEIQF 131
>sp|P47813|IF1AX_HUMAN Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo
sapiens GN=EIF1AX PE=1 SV=2
Length = 144
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEAMCFDG KRLCHIRGKLRKKVWIN DIIL+GLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++I+F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEIQF 131
>sp|Q6VV72|IF1A_RAT Eukaryotic translation initiation factor 1A OS=Rattus norvegicus
GN=Eif1a PE=2 SV=3
Length = 144
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEAMCFDG +RLCHIRGKLRKKVWIN DIILIGLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++I+F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEIQF 131
>sp|Q60872|IF1A_MOUSE Eukaryotic translation initiation factor 1A OS=Mus musculus
GN=Eif1a PE=2 SV=3
Length = 144
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEAMCFDG +RLCHIRGKLRKKVWIN DIILIGLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++I+F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEIQF 131
>sp|O14602|IF1AY_HUMAN Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo
sapiens GN=EIF1AY PE=1 SV=4
Length = 144
Score = 144 bits (364), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEA+CFDG KRLCHIRGKLRKKVWIN DIIL+GLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++I+F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEIQF 131
>sp|Q6GVM3|IF1AY_PANTR Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan
troglodytes GN=EIF1AY PE=2 SV=3
Length = 144
Score = 144 bits (363), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEA+CFDG KRLCHIRGKLRKKVWIN DIIL+GLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++++F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEVQF 131
>sp|P55877|IF1A_SCHPO Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tif11 PE=2 SV=2
Length = 138
Score = 141 bits (355), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/93 (73%), Positives = 75/93 (80%), Gaps = 1/93 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGR+EA CFDG KRL HIRGKLRKKVWINQGDIIL+ LR++QD K DVILKYT DEA
Sbjct: 41 MLGNGRIEAACFDGVKRLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDE-DIEF 92
R LK GE PET +IN+T TF EG D+ D EF
Sbjct: 101 RTLKNQGELPETAKINETDTFGAEGEDDLDFEF 133
>sp|Q54YJ6|IF1A_DICDI Eukaryotic translation initiation factor 1A OS=Dictyostelium
discoideum GN=eif1a PE=3 SV=1
Length = 141
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 68/81 (83%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEA CFDG KRLCHI G+LRKK WIN GDIILI LRDYQ+ KADVIL+Y DEA
Sbjct: 40 MLGNGRLEASCFDGEKRLCHISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEA 99
Query: 61 RNLKTYGEFPETVRINDTVTF 81
RNLKTYGE PET RIN+T F
Sbjct: 100 RNLKTYGELPETARINETDAF 120
>sp|P47814|IF1A_RABIT Eukaryotic translation initiation factor 1A OS=Oryctolagus
cuniculus GN=EIF1A PE=1 SV=2
Length = 144
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGRLEAM FDG KRL HIRGKLRKKVWIN DIIL+GLR+YQD KADVILKY DEA
Sbjct: 41 MLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R+LK YGE PE +IN+T TF G D++I+F
Sbjct: 101 RSLKAYGELPEHAKINETDTF-GPGDDDEIQF 131
>sp|P47815|IF1A_WHEAT Eukaryotic translation initiation factor 1A OS=Triticum aestivum
PE=1 SV=2
Length = 144
Score = 132 bits (332), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 78/102 (76%), Gaps = 4/102 (3%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGR EA+C DGTKRLCHIRGK+ KKVWI GDI+L+GLRDYQD KADVILKY DEA
Sbjct: 41 MLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEA 100
Query: 61 RNLKTYGEFPETVRINDTVTF--VEEGY-DED-IEFGDEISD 98
R LK YGE P+TVR+N+ V EEG D D I+F DE D
Sbjct: 101 RLLKAYGELPDTVRLNEGVDVDGPEEGEGDSDYIQFEDEDID 142
>sp|P56331|IF1A_ONOVI Eukaryotic translation initiation factor 1A OS=Onobrychis
viciifolia PE=2 SV=2
Length = 145
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 75/105 (71%), Gaps = 9/105 (8%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGR EAMC DGTKRLCHIRGK+ KKVWI GDIIL+GLRDYQD KADVILK PDEA
Sbjct: 41 MLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDED-------IEFGDEISD 98
R LK YGE P+ R+N+ + G DE+ IEF DE D
Sbjct: 101 RLLKAYGELPDNTRLNEGIGA--GGLDEEMDTANDYIEFEDEDID 143
>sp|P38912|IF1A_YEAST Eukaryotic translation initiation factor 1A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF11 PE=1
SV=1
Length = 153
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGNGR+EA CFDG KR+ HIRGKLRKKVW+ QGDIIL+ LRD+QD + DV+ KY DEA
Sbjct: 41 MLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDIILVSLRDFQDDQCDVVHKYNLDEA 100
Query: 61 RNLKTYGEFPETVRINDTVTFVEEGYDEDIEF 92
R LK GE PE +IN+T F E DED+ F
Sbjct: 101 RTLKNQGELPENAKINETDNFGFES-DEDVNF 131
>sp|Q3IT14|IF1A_NATPD Translation initiation factor 1A OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1
Length = 97
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG R++ C DGT+R I G+++K++WI + D++L+ D+QD KADV+ +Y EA
Sbjct: 25 MLGANRVKVRCMDGTERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKADVVWRYEKQEA 84
Query: 61 RNLKTYGEFPETV 73
L+ G ++V
Sbjct: 85 DQLREEGHITDSV 97
>sp|Q8TXZ3|IF1A_METKA Translation initiation factor 1A OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=eIF1A PE=3
SV=1
Length = 111
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLGN R++ C DG R+ I GK+RK+VWI +GD++L+ ++Q +ADV +YT +
Sbjct: 28 MLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPERADVTWRYTRVQV 87
Query: 61 RNLKTYGEFPETV 73
LK G+ E V
Sbjct: 88 DWLKRKGKLDERV 100
>sp|C3N8M9|IF1A_SULIY Translation initiation factor 1A OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE
Sbjct: 30 MLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEI 89
Query: 61 RNL 63
+ L
Sbjct: 90 KRL 92
>sp|C3NMA0|IF1A_SULIN Translation initiation factor 1A OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE
Sbjct: 30 MLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEI 89
Query: 61 RNL 63
+ L
Sbjct: 90 KRL 92
>sp|C3MU29|IF1A_SULIM Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE
Sbjct: 30 MLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEI 89
Query: 61 RNL 63
+ L
Sbjct: 90 KRL 92
>sp|C3MK60|IF1A_SULIL Translation initiation factor 1A OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE
Sbjct: 30 MLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEI 89
Query: 61 RNL 63
+ L
Sbjct: 90 KRL 92
>sp|C4KK84|IF1A_SULIK Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE
Sbjct: 30 MLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEI 89
Query: 61 RNL 63
+ L
Sbjct: 90 KRL 92
>sp|C3N0P1|IF1A_SULIA Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.16.27) GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE
Sbjct: 30 MLGGDHLVVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEI 89
Query: 61 RNL 63
+ L
Sbjct: 90 KRL 92
>sp|Q97W62|IF1A_SULSO Translation initiation factor 1A OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
GN=eIF1A PE=3 SV=1
Length = 108
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG L +C DG +RL I GK+RKK+W+ +GD++L+G+ D+Q + D++ KY DE
Sbjct: 30 MLGGDHLIVLCMDGKERLARIPGKIRKKMWMREGDVVLVGIWDFQPNRCDILYKYGNDEI 89
Query: 61 RNL 63
+ L
Sbjct: 90 KRL 92
>sp|Q6L2G4|IF1A_PICTO Translation initiation factor 1A OS=Picrophilus torridus (strain
ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
GN=eif1a PE=3 SV=1
Length = 108
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
M G RL MC DG R C I GK++K++WI +GD++++ ++QD K D+I +YT +A
Sbjct: 29 MSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEKGDIIYRYTKTQA 88
Query: 61 RNLKTYGEFPETVRI 75
L PE + +
Sbjct: 89 AYLSRNHMLPEIIDV 103
>sp|Q2NEP1|IF1A_METST Translation initiation factor 1A OS=Methanosphaera stadtmanae
(strain DSM 3091) GN=eif1a PE=3 SV=1
Length = 111
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDE 59
+LG+G+L+ C D RLC I GK++K++WI +GD++L+ D+Q D KADVI +YT E
Sbjct: 40 ILGHGKLKVRCNDKQIRLCRIPGKMKKRIWIREGDVVLVKPWDFQSDEKADVIWRYTRTE 99
Query: 60 ARNLKTYG 67
A L+ G
Sbjct: 100 ANYLERRG 107
>sp|B8D5N1|IF1A_DESK1 Translation initiation factor 1A OS=Desulfurococcus kamchatkensis
(strain 1221n / DSM 18924) GN=eIF1A PE=3 SV=1
Length = 116
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%)
Query: 2 LGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEAR 61
LG L A C DG R I GKLR+KVWI +GDIIL+GL D+ K +V+ KY +E
Sbjct: 37 LGGDYLIAKCLDGVDRKIRIPGKLRRKVWITEGDIILVGLWDFSSEKGEVVYKYGKNEVN 96
Query: 62 NLKTYGEFPE 71
L G P+
Sbjct: 97 KLVEKGVVPK 106
>sp|Q5UZM2|IF1A_HALMA Translation initiation factor 1A OS=Haloarcula marismortui
(strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809)
GN=eif1a PE=3 SV=2
Length = 95
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG R++ C DG +R I GK++K++WI + D++L+ D+QD KAD+ +Y +A
Sbjct: 25 MLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVEPWDWQDEKADITWRYEKQDA 84
Query: 61 RNLKTYGEFPE 71
L+ G E
Sbjct: 85 DQLREEGHIQE 95
>sp|Q974Z9|IF1A_SULTO Translation initiation factor 1A OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=eIF1A PE=3
SV=2
Length = 108
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG ++ +C DG +RL I GK++KK+W+ +GD++L D+Q K D+I KY+ E
Sbjct: 30 MLGAEHVQVICLDGKERLGRIPGKMKKKMWVKEGDVVLAAPWDFQPNKCDIIYKYSESEV 89
Query: 61 RNL 63
R L
Sbjct: 90 RRL 92
>sp|Q4JA54|IF1A_SULAC Translation initiation factor 1A OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=eif1a PE=3 SV=1
Length = 108
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
+ G ++ +C DG +RL I GKL+KKVWI +GD++L D+Q K D++ +YT E
Sbjct: 30 LFGGEHVQVICTDGKERLGRIPGKLKKKVWIREGDVVLAAPWDFQPNKCDIVYRYTESEV 89
Query: 61 RNL 63
R L
Sbjct: 90 RRL 92
>sp|A2STQ8|IF1A_METLZ Translation initiation factor 1A OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=eIF1A PE=3 SV=1
Length = 105
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG+ + C DG RL I+GK++K+VWI +GDI+++ D+QD K D+I +YT +
Sbjct: 37 MLGSNHIRVRCSDGVTRLGRIKGKIKKRVWIREGDILIVVPWDFQDDKCDIIYRYTTPQV 96
Query: 61 RNLKTY 66
L+ +
Sbjct: 97 DWLRAH 102
>sp|A4YEH8|IF1A_METS5 Translation initiation factor 1A OS=Metallosphaera sedula (strain
ATCC 51363 / DSM 5348) GN=eIF1A PE=3 SV=1
Length = 108
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG + C DG +R I G++RKK WI +GD++L D+Q KAD++ +Y DE
Sbjct: 30 MLGAEHIIIACLDGKERTARIPGRMRKKTWIKEGDVVLAAPWDFQPTKADIVYRYMNDEI 89
Query: 61 RNL 63
R L
Sbjct: 90 RKL 92
>sp|B0R7D8|IF1A_HALS3 Translation initiation factor 1A OS=Halobacterium salinarum
(strain ATCC 29341 / DSM 671 / R1) GN=eIF1A PE=3 SV=1
Length = 95
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG R++ C DG +R I G+++K++WI + DI+L+ D+QD KADV +Y +A
Sbjct: 26 MLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDA 85
Query: 61 RNLKTYG 67
L+ G
Sbjct: 86 DQLREEG 92
>sp|Q9HN64|IF1A1_HALSA Translation initiation factor 1A 1 OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=eIF1A1 PE=3
SV=1
Length = 95
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG R++ C DG +R I G+++K++WI + DI+L+ D+QD KADV +Y +A
Sbjct: 26 MLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPWDWQDDKADVTWRYEKSDA 85
Query: 61 RNLKTYG 67
L+ G
Sbjct: 86 DQLREEG 92
>sp|O29481|IF1A_ARCFU Translation initiation factor 1A OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=eIF1A PE=3 SV=2
Length = 97
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG G ++ C DG +RL I GK+RKK+WI +GD++++ +Q +AD++ +YT +
Sbjct: 27 MLGAGHIKVRCEDGVERLARIPGKMRKKIWIREGDVVIVVPWSFQKDRADIVWRYTNPQV 86
Query: 61 RNLKTYG 67
L+ G
Sbjct: 87 EWLERKG 93
>sp|Q469J2|IF1A1_METBF Translation initiation factor 1A 1 OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=eif1a1 PE=3 SV=1
Length = 96
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
+LG+ R+ C DG R+ I G KK+WI++GD++++ D QD+KADVI KYT +
Sbjct: 27 LLGSKRVTLQCMDGVVRMGRIPGSKNKKMWIHEGDVVIVAPWDIQDSKADVIWKYTRPQV 86
Query: 61 RNLKTYG 67
L+ G
Sbjct: 87 EWLERKG 93
>sp|Q979F7|IF1A_THEVO Translation initiation factor 1A OS=Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=eIF1A PE=3 SV=1
Length = 123
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
M G RL MC DG R I G++RK++WI + D++++ ++Q KADV+ +YT +A
Sbjct: 47 MEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEKADVVYRYTKTQA 106
Query: 61 RNLKTYGEFPETVRI 75
L PE + I
Sbjct: 107 SYLSRNHMLPEVIDI 121
>sp|Q03590|IF1A_THEAC Translation initiation factor 1A OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=eIF1A PE=3 SV=2
Length = 119
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
M G RL MC DG R I G++RK++WI + D++++ ++Q KADV+ +YT +A
Sbjct: 43 MEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEKADVVYRYTKTQA 102
Query: 61 RNLKTYGEFPETVRI 75
L PE + I
Sbjct: 103 SYLSRNHMLPEVIDI 117
>sp|Q18EX1|IF1A1_HALWD Translation initiation factor 1A 1 OS=Haloquadratum walsbyi
(strain DSM 16790) GN=eif1a1 PE=3 SV=1
Length = 96
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
MLG R+ C DG +R I G+++K++WI + D++L+ D+QD K D+ +Y EA
Sbjct: 27 MLGANRVTVRCADGNERTARIPGRMQKRIWIREDDVVLVEPWDWQDEKGDITWRYEKSEA 86
Query: 61 RNLKTYGEF 69
L+ G
Sbjct: 87 DQLREEGRI 95
>sp|Q8TSA3|IF1A1_METAC Translation initiation factor 1A 1 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A1 PE=3 SV=1
Length = 111
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYT 56
+LG RL C DG R+ I G ++KK WI +GD++++ ++Q+ KADVI KYT
Sbjct: 41 LLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEKADVIWKYT 96
>sp|Q12YN5|IF1A_METBU Translation initiation factor 1A OS=Methanococcoides burtonii
(strain DSM 6242) GN=eif1a PE=3 SV=1
Length = 106
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
+LG R+ C DG R+ I G +K++W+ +GDI++I D+QD+KA+VI KYT +
Sbjct: 37 LLGGKRVTLQCMDGIVRMGRIPGSKKKRMWVREGDIVIITPWDFQDSKAEVIWKYTRPQV 96
Query: 61 RNLKTYG 67
L+ G
Sbjct: 97 EWLERKG 103
>sp|O27085|IF1A_METTH Translation initiation factor 1A OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eIF1A PE=3 SV=1
Length = 99
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDE 59
++G+G+L+ C DG RL I GK++K++WI +GD++L+ ++Q + KAD++ +YT E
Sbjct: 28 IMGHGKLKVRCADGHIRLGRIPGKMKKRIWIREGDVVLVKPWEFQSEEKADIVWRYTRTE 87
Query: 60 ARNLKTYG 67
+ L+ G
Sbjct: 88 SNWLERKG 95
>sp|Q8PVF1|IF1A1_METMA Translation initiation factor 1A 1 OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=eIF1A1 PE=3 SV=2
Length = 111
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYT 56
+LG RL C DG R+ I G ++KK WI +GD+++ ++Q+ KADVI KYT
Sbjct: 41 LLGANRLRLRCMDGVVRMGRIPGSMKKKAWIREGDVVIAVPWEFQNEKADVIWKYT 96
>sp|Q8TR33|IF1A2_METAC Translation initiation factor 1A 2 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A2 PE=3 SV=1
Length = 105
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYT 56
+LG+ R+ C DG R+ I G KK+WI +GD++++ + QD KADVI KYT
Sbjct: 36 LLGSKRVNLQCMDGVVRMGRIPGSKNKKMWIREGDVVIVTPWEIQDTKADVIWKYT 91
>sp|Q8PUJ8|IF1A2_METMA Translation initiation factor 1A 2 OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM
11833 / OCM 88) GN=eIF1A2 PE=3 SV=1
Length = 106
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYT 56
+LG+ R+ C DG R+ I G KK+WI +GDI++ + QD+KADVI KYT
Sbjct: 37 LLGSKRVNLQCMDGVVRMGRIPGSKNKKMWIREGDIVIATPWEIQDSKADVIWKYT 92
>sp|Q8TR31|IF1A3_METAC Translation initiation factor 1A 3 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A3 PE=3 SV=1
Length = 110
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
+LG+ R+ C DG R+ I G KK+W+ +GD+++ + QD+KADVI KYT +
Sbjct: 41 LLGSKRVTLQCMDGVVRMGRIPGSKNKKMWVREGDVVIANPWEIQDSKADVIWKYTKPQV 100
Query: 61 RNLKTYG 67
L+ G
Sbjct: 101 DWLERKG 107
>sp|Q57887|IF1A_METJA Translation initiation factor 1A OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=eIF1A PE=1 SV=1
Length = 102
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDE 59
MLG R+ C DG RL I G+L+ ++W+ +GD++++ + Q D K D+I +YT +
Sbjct: 29 MLGASRVRVRCLDGKTRLGRIPGRLKNRIWVREGDVVIVKPWEVQGDQKCDIIWRYTKTQ 88
Query: 60 ARNLKTYGEFPE 71
LK G E
Sbjct: 89 VEWLKRKGYLDE 100
>sp|A6UUK8|IF1A_META3 Translation initiation factor 1A OS=Methanococcus aeolicus
(strain Nankai-3 / ATCC BAA-1280) GN=eIF1A PE=3 SV=1
Length = 105
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDE 59
MLG R+ C DG R+ I GKL++K+W+ +GDI+++ + Q D K D+I +YT +
Sbjct: 31 MLGASRVRVRCMDGHTRMGRIPGKLKRKIWVREGDIVIVVPWEVQSDQKCDIIWRYTKGQ 90
Query: 60 ARNLKTYG 67
L G
Sbjct: 91 VSWLSKKG 98
>sp|P57676|IF1A_AERPE Translation initiation factor 1A OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=eIF1A PE=3 SV=1
Length = 111
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
++G G LE +C DG + I GK+R++VW+ +GD++L D K +V+ +Y DE
Sbjct: 31 VVGAGFLEVLCTDGEVYMARIPGKMRRRVWMREGDVVLFLPWGTADKKGEVVYRYLRDEV 90
Query: 61 RNLKTYGEFPE 71
R L PE
Sbjct: 91 RKLIDMNLLPE 101
>sp|Q469I9|IF1A2_METBF Translation initiation factor 1A 2 OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=eif1a2 PE=3 SV=1
Length = 115
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEA 60
+LG+ R+ C DG R+ I G +K++WI +GDI++ + QD+KADV KYT +
Sbjct: 46 LLGSKRVTLQCMDGVVRMGRIPGSKKKRMWIREGDIVIANPWEIQDSKADVTWKYTRPQV 105
Query: 61 RNLKTYG 67
L+ G
Sbjct: 106 EWLERKG 112
>sp|Q18JF4|IF1A2_HALWD Translation initiation factor 1A 2 OS=Haloquadratum walsbyi
(strain DSM 16790) GN=eif1a2 PE=3 SV=1
Length = 94
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 3 GNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQDAKADVILKYTPDEARN 62
G + C DG R+ I G+++ + WIN+GD++L+ +QD KA++ +Y+ +A
Sbjct: 27 GGNHVRVRCQDGENRMGRIPGRMKYRTWINEGDVVLVEPWAWQDEKANIEWRYSEQDAEQ 86
Query: 63 LKTYGEF 69
L+T G
Sbjct: 87 LRTEGHI 93
>sp|A4FYM5|IF1A_METM5 Translation initiation factor 1A OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=eIF1A PE=3 SV=1
Length = 103
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MLGNGRLEAMCFDGTKRLCHIRGKLRKKVWINQGDIILIGLRDYQ-DAKADVILKYTPDE 59
MLG R+ C DG R+ I GKL++K+W+ + D++++ + Q D K DVI +YT +
Sbjct: 30 MLGASRVRVRCMDGKLRMGRIPGKLKRKIWVREDDVVIVTPWEVQSDEKCDVIWRYTKGQ 89
Query: 60 AR--NLKTYGEF 69
N K Y EF
Sbjct: 90 VDWLNRKGYLEF 101
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,795,689
Number of Sequences: 539616
Number of extensions: 4701268
Number of successful extensions: 11707
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 11594
Number of HSP's gapped (non-prelim): 126
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)