BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2273
(434 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|B Chain B, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
pdb|3MDJ|C Chain C, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase
Inhibitor, Bestatin
Length = 921
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
R +AST FEP AR FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+ E +
Sbjct: 139 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 197
Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
DHF ++ MS YL+ F + FES++ + + ++ VYA
Sbjct: 198 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 235
>pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human
Endoplasmic Reticulum Aminopeptidase 1 Erap1
Length = 897
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
R +AST FEP AR FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+ E +
Sbjct: 130 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 188
Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
DHF ++ MS YL+ F + FES++ + + ++ VYA
Sbjct: 189 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 226
>pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|B Chain B, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
pdb|3QNF|C Chain C, Crystal Structure Of The Open State Of Human Endoplasmic
Reticulum Aminopeptidase 1 Erap1
Length = 954
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 65/98 (66%), Gaps = 4/98 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRR-PHHMSSLSNMPLLKTAEDGESRV- 214
R +AST FEP AR FPCFDEP FKA FS+ IRR P H+ ++SNMPL+K+ E +
Sbjct: 181 RILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHL-AISNMPLVKSVTVAEGLIE 239
Query: 215 DHFQESMPMSPYLLCFTVGSFESLT-LWDNSIQYKVYA 251
DHF ++ MS YL+ F + FES++ + + ++ VYA
Sbjct: 240 DHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYA 277
>pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
pdb|3SE6|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2
Length = 967
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
F++ + L R +A T FEP AR FPCFDEP FKA FS+ IRR +LSNMP
Sbjct: 179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPK 238
Query: 204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
+KT E +G DHF+ ++ MS YL+ + V F SL+ + +S ++ +YA
Sbjct: 239 VKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYA 288
>pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
pdb|4E36|B Chain B, Crystal Structure Of The Human Endoplasmic Reticulum
Aminopeptidase 2 Variant N392k
Length = 967
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Query: 144 FFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPL 203
F++ + L R +A T FEP AR FPCFDEP FKA FS+ IRR +LSNMP
Sbjct: 179 FYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPK 238
Query: 204 LKTAE-DGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNS-IQYKVYA 251
+KT E +G DHF+ ++ MS YL+ + V F SL+ + +S ++ +YA
Sbjct: 239 VKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYA 288
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
pdb|4F5C|B Chain B, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
Length = 959
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
++ +A+T + AR FPCFDEP KA F++ + P+++++LSNMP + AED
Sbjct: 181 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 240
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
V F+ + MS YLL + V F+S+
Sbjct: 241 WSVTEFETTPVMSTYLLAYIVSEFQSV 267
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Poly- Alanine
Length = 908
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
++ +A+T + AR FPCFDEP KA F++ + P+++++LSNMP + AED
Sbjct: 137 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 196
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
V F+ + MS YLL + V F+S+
Sbjct: 197 WSVTEFETTPVMSTYLLAYIVSEFQSV 223
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N
pdb|4FKH|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Alanine
pdb|4FKK|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Bestatin
Length = 909
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
++ +A+T + AR FPCFDEP KA F++ + P+++++LSNMP + AED
Sbjct: 138 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 197
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
V F+ + MS YLL + V F+S+
Sbjct: 198 WSVTEFETTPVMSTYLLAYIVSEFQSV 224
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Cleaved Poly-Alanine
pdb|4HOM|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Substance P
Length = 908
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT----AEDGE 211
++ +A+T + AR FPCFDEP KA F++ + P+++++LSNMP + AED
Sbjct: 137 KKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPN 196
Query: 212 SRVDHFQESMPMSPYLLCFTVGSFESL 238
V F+ + MS YLL + V F+S+
Sbjct: 197 WSVTEFETTPVMSTYLLAYIVSEFQSV 223
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13)
pdb|4FYR|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Bestatin
pdb|4FYS|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Angiotensin
Iv
pdb|4FYT|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Amastatin
Length = 903
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 157 RYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNM----PLLKTAEDGES 212
+ VA+T + AR FPCFDEP KA F++ + P +++LSNM P ED
Sbjct: 141 KVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW 200
Query: 213 RVDHFQESMPMSPYLLCFTVGSFE 236
V F + MS YLL F V F+
Sbjct: 201 NVTEFHTTPKMSTYLLAFIVSEFD 224
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3
From Thermoplasma Acidophilum, A Zinc Aminopeptidase In
Three Different Conformations
pdb|1Z5H|A Chain A, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
pdb|1Z5H|B Chain B, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
Length = 780
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD 215
E + +T FE AR +FPC D P +KA F++ + ++SNMP K E E +V
Sbjct: 92 ENGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMP-PKRIEVSERKVV 150
Query: 216 HFQESMPMSPYLLCFTVGSF 235
FQ++ MS YLL +G F
Sbjct: 151 EFQDTPRMSTYLLYVGIGKF 170
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 156 ERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGESRVD 215
E + +T F+ AR +FPC D P +KA F++ + ++SNMP K E E +V
Sbjct: 92 ENGMITTHFQATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISNMP-PKRIEVSERKVV 150
Query: 216 HFQESMPMSPYLLCFTVGSF 235
FQ++ MS YLL +G F
Sbjct: 151 EFQDTPRMSTYLLYVGIGKF 170
>pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin
Length = 632
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 146 EHCSKRLWVSER-------YVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSL 198
+ C+ W++ + YV S + E AR++FPCFD P K+ F+ I P +
Sbjct: 122 DKCTALQWLNSKQTKGGKPYVFSQL-EAIHARSLFPCFDTPSVKSTFTASIESPLPV-VF 179
Query: 199 SNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQY 247
S + + T++D + + F++ +P+ YL+ G S + S Y
Sbjct: 180 SGIRIEDTSKD--TNIYRFEQKVPIPAYLIGIASGDLSSAPIGPRSTVY 226
>pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From
Saccharomyces Cerevisiae
pdb|2XPZ|A Chain A, Structure Of Native Yeast Lta4 Hydrolase
Length = 632
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 146 EHCSKRLWVSER-------YVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSL 198
+ C+ W++ + YV S + E AR++FPCFD P K+ F+ I P +
Sbjct: 122 DKCTALQWLNSKQTKGGKPYVFSQL-EAIHARSLFPCFDTPSVKSTFTASIESPLPV-VF 179
Query: 199 SNMPLLKTAEDGESRVDHFQESMPMSPYLLCFTVGSFESLTLWDNSIQY 247
S + + T++D + + F++ +P+ YL+ G S + S Y
Sbjct: 180 SGIRIEDTSKD--TNIYRFEQKVPIPAYLIGIASGDLSSAPIGPRSTVY 226
>pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Sc57461a
Length = 608
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + + L+ DGE+ ++ F +
Sbjct: 138 CRAILPCQDTPSVKLTYTAEVSVPKEL-----VALMSAIRDGETPDPEDPSRKIYKFIQK 192
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 193 VPIPCYLIALVVGALES 209
>pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate
pdb|3B7T|A Chain A, [e296q]lta4h In Complex With Arg-Ala-Arg Substrate
Length = 616
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + +L + DGE+ ++ F +
Sbjct: 146 CRAILPCQDTPSVKLTYTAEVSVPKELVAL-----MSAIRDGETPDPEDPSRKIYKFIQK 200
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 201 VPIPCYLIALVVGALES 217
>pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase
Length = 610
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + +L + DGE+ ++ F +
Sbjct: 140 CRAILPCQDTPSVKLTYTAEVSVPKELVAL-----MSAIRDGETPDPEDPSRKIYKFIQK 194
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 195 VPIPCYLIALVVGALES 211
>pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant
Length = 610
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + +L + DGE+ ++ F +
Sbjct: 140 CRAILPCQDTPSVKLTYTAEVSVPKELVAL-----MSAIRDGETPDPEDPSRKIYKFIQK 194
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 195 VPIPCYLIALVVGALES 211
>pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041
pdb|3B7R|L Chain L, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3040
pdb|3B7U|X Chain X, Leukotriene A4 Hydrolase Complexed With Kelatorphan
Length = 616
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + +L + DGE+ ++ F +
Sbjct: 146 CRAILPCQDTPSVKLTYTAEVSVPKELVAL-----MSAIRDGETPDPEDPSRKIYKFIQK 200
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 201 VPIPCYLIALVVGALES 217
>pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide
pdb|3CHP|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (3s)-3-Amino-4-Oxo-4-[(4-Phenylmethoxyphenyl)
Amino]butanoic Acid
pdb|3CHQ|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With N5-[4-(Phenylmethoxy)phenyl]-L-Glutamine
pdb|3CHR|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With 4-Amino-N-[4-(Phenylmethoxy)phenyl]-Butanamide
pdb|3CHS|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex
With (2s)-2-Amino-5-[[4-[(2s)-2-Hydroxy-2-Phenyl-
Ethoxy]phenyl]amino]-5-Oxo-Pentanoic Acid
Length = 610
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + +L + DGE+ ++ F +
Sbjct: 140 CRAILPCQDTPSVKLTYTAEVSVPKELVAL-----MSAIRDGETPDPEDPSRKIYKFIQK 194
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 195 VPIPCYLIALVVGALES 211
>pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase
Length = 611
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + +L + DGE+ ++ F +
Sbjct: 141 CRAILPCQDTPSVKLTYTAEVSVPKELVAL-----MSAIRDGETPDPEDPSRKIYKFIQK 195
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 196 VPIPCYLIALVVGALES 212
>pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With
Bestatin.
pdb|2VJ8|A Chain A, Complex Of Human Leukotriene A4 Hydrolase With A
Hydroxamic Acid Inhibitor
pdb|3FTS|A Chain A, Leukotriene A4 Hydrolase In Complex With Resveratrol
pdb|3FTU|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol
pdb|3FTV|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment N-
(Pyridin-3-Ylmethyl)aniline
pdb|3FTW|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragments N-
(Pyridin-3-Ylmethyl)aniline And Acetate
pdb|3FTX|A Chain A, Leukotriene A4 Hydrolase In Complex With
Dihydroresveratrol And Bestatin
pdb|3FTY|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 3-
(Benzyloxy)pyridin-2-Amine
pdb|3FU0|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(4-
Fluorobenzoyl)pyridine
pdb|3FU3|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 4-(2-
Amino-1,3-Thiazol-4-Yl)phenol
pdb|3FU5|A Chain A, Leukotriene A4 Hydrolase In Complex With (5-Thiophen-2-
Ylthiophen-2-Yl)methylamine
pdb|3FU6|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment (4-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUD|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Methyl-1-(2-
Thiophen-2-Ylphenyl)methanamine
pdb|3FUE|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Chloroindole And Bestatin
pdb|3FUF|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Fluoroindole And Bestatin
pdb|3FUH|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment 5-
Hydroxyindole And Bestatin
pdb|3FUI|A Chain A, Leukotriene A4 Hydrolase In Complex With N-Benzyl-4-[(2r)-
Pyrrolidin-2-Ylmethoxy]aniline
pdb|3FUJ|A Chain A, Leukotriene A4 Hydrolase In Complex With
5-[2-(1h-Pyrrol-1- Yl)ethoxy]-1h-Indole
pdb|3FUK|A Chain A, Leukotriene A4 Hydrolase In Complex With 1-[2-(1h-Indol-5-
Yloxy)ethyl]piperidine-4-Carboxylic Acid
pdb|3FUM|A Chain A, Leukotriene A4 Hydrolase In Complex With
(R)-Pyridin-4-Yl[4-
(2-Pyrrolidin-1-Ylethoxy)phenyl]methanol
pdb|3FUN|A Chain A, Leukotriene A4 Hydrolase In Complex With {4-[(2r)-
Pyrrolidin-2-Ylmethoxy]phenyl}(4-Thiophen-3-Ylphenyl)
Methanone
pdb|3FH5|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
(2r)-2-[(4- Benzylphenoxy)methyl]pyrrolidine.
pdb|3FH7|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor
4-[(2s)-2-{[4-(4-
Chlorophenoxy)phenoxy]methyl}pyrrolidin-1-Yl]butanoate.
pdb|3FH8|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor 1-[2-(4-
Benzylphenoxy)ethyl]pyrrolidine.
pdb|3FHE|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor N-[3-(4-
Benzylphenoxy)propyl]-N-Methyl-Beta-Alanine.
pdb|3FTZ|A Chain A, Leukotriene A4 Hydrolase In Complex With Fragment
2-(pyridin-3- Ylmethoxy)aniline
pdb|3FUL|A Chain A, Leukotriene A4 Hydrolase In Complex With
Pyridin-4-Yl[4-(2-Pyrrolidin-
1-Ylethoxy)phenyl]methanone
pdb|4DPR|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex
With Inhibitor Captopril
Length = 611
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
Query: 169 ARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKTAEDGES--------RVDHFQES 220
R + PC D P K ++ + P + +L + DGE+ ++ F +
Sbjct: 141 CRAILPCQDTPSVKLTYTAEVSVPKELVAL-----MSAIRDGETPDPEDPSRKIYKFIQK 195
Query: 221 MPMSPYLLCFTVGSFES 237
+P+ YL+ VG+ ES
Sbjct: 196 VPIPCYLIALVVGALES 212
>pdb|3IHP|A Chain A, Covalent Ubiquitin-Usp5 Complex
pdb|3IHP|B Chain B, Covalent Ubiquitin-Usp5 Complex
Length = 854
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 339 ALVKNLMSVPGSNKPAGSWENAIQKSSQNDSSSWTKNPNSTFSDKSQYA-LGHNIAEGSW 397
++V+ L S+P + + + ++K QN + +P FS +Q A LGH + G +
Sbjct: 358 SVVQVLFSIPDFQR---KYVDKLEKIFQNAPT----DPTQDFS--TQVAKLGHGLLSGEY 408
Query: 398 PIPVPSNKAVKRLPSEK 414
PVP + +R+P +K
Sbjct: 409 SKPVPESGDGERVPEQK 425
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.126 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,776,517
Number of Sequences: 62578
Number of extensions: 565898
Number of successful extensions: 887
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 843
Number of HSP's gapped (non-prelim): 42
length of query: 434
length of database: 14,973,337
effective HSP length: 102
effective length of query: 332
effective length of database: 8,590,381
effective search space: 2852006492
effective search space used: 2852006492
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 53 (25.0 bits)