RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2273
         (434 letters)



>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 208

 Score = 72.2 bits (176), Expect = 2e-15
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 153 WVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRPHHMSSLSNMPLLKT---AED 209
              E     +  +    R + PC D P  K  ++  +  P  + +L +          ED
Sbjct: 124 SGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRDGETPDPED 183

Query: 210 GESRVDHFQESMPMSPYLLCFTVGS 234
              ++  F + +P+  YL+   VG+
Sbjct: 184 PSRKIYKFIQKVPIPCYLIALVVGA 208


>d1vkma_ c.138.1.1 (A:) Hypothetical protein TM1464 {Thermotoga
           maritima [TaxId: 2336]}
          Length = 292

 Score = 29.5 bits (66), Expect = 0.70
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 4/63 (6%)

Query: 112 VNPNVVPIFDG--HSGLPDSDL--LALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPN 167
               V+ I  G   +G+ + +L  +  +  +KV  +           +   V++T+F   
Sbjct: 54  FQLAVIGILKGKIVAGMSEEELEAMMREGADKVGTREIPIVVAEGKNAATTVSATIFLSR 113

Query: 168 LAR 170
              
Sbjct: 114 RIG 116


>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase
           pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 235

 Score = 29.1 bits (64), Expect = 0.98
 Identities = 6/43 (13%), Positives = 15/43 (34%)

Query: 111 FVNPNVVPIFDGHSGLPDSDLLALDVFEKVAAKFFEHCSKRLW 153
           +    ++ + DG  G    ++ +  V   +A    +     L 
Sbjct: 23  YAGARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLL 65


>d1n2aa1 a.45.1.1 (A:81-201) Class beta GST {Escherichia coli
           [TaxId: 562]}
          Length = 121

 Score = 26.9 bits (59), Expect = 2.5
 Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 2/60 (3%)

Query: 133 ALDVFEKVAAKFFEHCSKRLWVSERYVASTVFEPNLARNVFPCFDEPHFKAYFSLMIRRP 192
            L    +        C +R  +++ Y+ + +                H  A+   M  RP
Sbjct: 52  KLQYVNEALKDEHWICGQRFTIADAYLFTVLR--WAYAVKLNLEGLEHIAAFMQRMAERP 109


>d1dnva_ b.121.5.3 (A:) Densovirus capsid protein {Galleria
           mellonella densovirus [TaxId: 37138]}
          Length = 415

 Score = 27.2 bits (60), Expect = 4.1
 Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 2/106 (1%)

Query: 302 TNKPAGSWENAIQKSSQNDSSSWTKNPNSIFSDKSQYALVKNLMSVPGSNKPAGSWENAI 361
           TN+  G W    +   Q DS +         + K +  L+K+ ++     +P      ++
Sbjct: 202 TNQGTGGWPCLAEHLQQFDSKTVNNQCLIDVTYKPKMGLIKSPLNYKIIGQPTVKGTISV 261

Query: 362 QKSSQNDSSSWTKNPNSTFSDKSQ--YALGHNIAEGSWPIPVPSNK 405
             +  N   +   NP     + ++  + L  N     + I     K
Sbjct: 262 GDNLVNMRGAVVTNPPEATQNVAESTHNLTRNFPADLFNIYSDIEK 307


>d1j83a_ b.18.1.12 (A:) Endo-1,4-beta glucanase EngF {Clostridium
           cellulovorans [TaxId: 1493]}
          Length = 180

 Score = 25.7 bits (56), Expect = 8.2
 Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 264 DGSTWENARNSTSSWTKNLD-----RTTWDNIEKGPQNYS-SSWTNKPAGSWENA 312
           +G+ W N R S   W ++++     + T D I   P N S ++        W N 
Sbjct: 58  EGNFWANVRISADIWGQSINIYGDTKLTMDVIAPTPVNVSIAAIPQSSTHGWGNP 112


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.312    0.126    0.385 

Gapped
Lambda     K      H
   0.267   0.0485    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,584,771
Number of extensions: 70126
Number of successful extensions: 117
Number of sequences better than 10.0: 1
Number of HSP's gapped: 116
Number of HSP's successfully gapped: 11
Length of query: 434
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 346
Effective length of database: 1,199,356
Effective search space: 414977176
Effective search space used: 414977176
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 54 (25.2 bits)