BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2274
(244 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0PXY6|RL18_DIACI 60S ribosomal protein L18 OS=Diaphorina citri GN=RpL18 PE=2 SV=1
Length = 188
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/99 (98%), Positives = 99/99 (100%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM
Sbjct: 2 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLT+
Sbjct: 62 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTV 100
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFLTRRTNSKFNKIILKRLFMSKIN
Sbjct: 31 LYRFLTRRTNSKFNKIILKRLFMSKIN 57
>sp|Q4GXG7|RL18_TIMBA 60S ribosomal protein L18 OS=Timarcha balearica GN=RpL18 PE=2 SV=1
Length = 188
Score = 154 bits (388), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 73/99 (73%), Positives = 87/99 (87%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HKYDR+VRRT+PKS+DVYL LLVKLYR+L RRT +KFNKIILKRLFMSKI RPP+
Sbjct: 2 GIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRYLARRTGAKFNKIILKRLFMSKIYRPPI 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++SK+VRFMKKP RE AVIVGT+ DD R++ IPKL+I
Sbjct: 62 SLSKVVRFMKKPGRELLTAVIVGTVTDDSRIFEIPKLSI 100
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKI 193
LYR+L RRT +KFNKIILKRLFMSKI
Sbjct: 31 LYRYLARRTGAKFNKIILKRLFMSKI 56
>sp|Q6F442|RL18_PLUXY 60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1
Length = 183
Score = 151 bits (381), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 65/100 (65%), Positives = 89/100 (89%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HK+DR+VRRT+ KS+DVYL LLVKLYR+L RRTN+KFN+I+L+RLFMS+INRPP+
Sbjct: 2 GIDINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIV 135
++S++ R MKKPTREG +AV+VGTI +D R++ +PK+T+
Sbjct: 62 SLSRLARHMKKPTREGLIAVVVGTITNDTRLYKVPKMTVA 101
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 26/27 (96%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYR+L RRTN+KFN+I+L+RLFMS+IN
Sbjct: 31 LYRYLARRTNAKFNQIVLRRLFMSRIN 57
>sp|Q962Y8|RL18_SPOFR 60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2
SV=1
Length = 183
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 93/120 (77%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HK+DR+VRRT+ KS+DVYL LLVKLYR+L RRTNSKFN IIL+RLFMS+INRPP+
Sbjct: 2 GIDINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNSKFNTIILRRLFMSRINRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
++S++ R MKKPTREG +AV+VGTI +D R++ +PK+++ R+ G I+
Sbjct: 62 SLSRLARHMKKPTREGMIAVVVGTITNDVRLYKVPKMSVAALHVTEKARARILAAGGEIL 121
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/27 (81%), Positives = 25/27 (92%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYR+L RRTNSKFN IIL+RLFMS+IN
Sbjct: 31 LYRYLARRTNSKFNTIILRRLFMSRIN 57
>sp|Q5UAS1|RL18_BOMMO 60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1
Length = 183
Score = 150 bits (380), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 67/120 (55%), Positives = 94/120 (78%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HK+DR+VRRT+ KS+D+YL LLVKLYR+L RRTN+KFN+I+L+RLFMS+INRPP+
Sbjct: 2 GIDINHKHDRKVRRTEVKSQDIYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRPPI 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
++S++ R MKKPTREG +AV+VGT+ +D R++ IPK+T+ R+ G I+
Sbjct: 62 SVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEIL 121
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 5/57 (8%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN----SISERELDV-KPTNTLALLPVFPTVT 219
LYR+L RRTN+KFN+I+L+RLFMS+IN S+S + KPT + V TVT
Sbjct: 31 LYRYLARRTNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVT 87
>sp|Q56FG8|RL18_LYSTE 60S ribosomal protein L18 OS=Lysiphlebus testaceipes GN=RpL18 PE=2
SV=1
Length = 188
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 96/128 (75%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HKYDR+VRRT+P+S+D+YL LLVK+YRFL RRTNSKF++IILKRLFMS+IN PP+
Sbjct: 2 GIDINHKYDRKVRRTEPRSQDIYLRLLVKVYRFLARRTNSKFSRIILKRLFMSRINLPPI 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
+++++ RFMKK +R+ +AV+VGTI DD R++ IPKL + GR+ G I+
Sbjct: 62 SLARVCRFMKKESRKNSIAVVVGTITDDARIFEIPKLKVCALRITEKARGRILKAGGEII 121
Query: 156 DDPRMWTI 163
++ I
Sbjct: 122 TFEKLAEI 129
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 27/29 (93%)
Query: 166 LTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
+ +YRFL RRTNSKF++IILKRLFMS+IN
Sbjct: 29 VKVYRFLARRTNSKFSRIILKRLFMSRIN 57
>sp|Q9VS34|RL18_DROME 60S ribosomal protein L18 OS=Drosophila melanogaster GN=RpL18 PE=1
SV=1
Length = 188
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 86/120 (71%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HKYDR+VRRT+PKS+DVYL LLVKLYRFL RRTN KFN+IILKRLFMSKINRPP+
Sbjct: 2 GIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
++ +I RF K + V+VGT+ DD R+ +PKLT+ T R+ G ++
Sbjct: 62 SLQRIARFFKAANQPESTIVVVGTVTDDARLLVVPKLTVCALHVTQTARERILKAGGEVL 121
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTN KFN+IILKRLFMSKIN
Sbjct: 31 LYRFLQRRTNKKFNRIILKRLFMSKIN 57
>sp|Q5E973|RL18_BOVIN 60S ribosomal protein L18 OS=Bos taurus GN=RPL18 PE=2 SV=3
Length = 188
Score = 138 bits (347), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 82/99 (82%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK P REG+ AV+VGTI DD R+ +PKL +
Sbjct: 62 SLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKV 100
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSTFNQVVLKRLFMSRTN 57
>sp|P12001|RL18_RAT 60S ribosomal protein L18 OS=Rattus norvegicus GN=Rpl18 PE=2 SV=2
Length = 188
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK P RE + AV+VGTI DD R+ +PKL +
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRILEVPKLKV 100
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSTFNQVVLKRLFMSRTN 57
>sp|D0VWQ3|RL18_CANFA Ribosomal protein L18 OS=Canis familiaris GN=RPL18 PE=1 SV=2
Length = 188
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK P RE + AV+VGTI DD R+ +PKL +
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKV 100
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSTFNQVVLKRLFMSRTN 57
>sp|Q4R5H8|RL18_MACFA 60S ribosomal protein L18 OS=Macaca fascicularis GN=RPL18 PE=2 SV=1
Length = 188
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK P RE + AV+VGTI DD R+ +PKL +
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKV 100
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSTFNQVVLKRLFMSRTN 57
>sp|Q07020|RL18_HUMAN 60S ribosomal protein L18 OS=Homo sapiens GN=RPL18 PE=1 SV=2
Length = 188
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK P RE + AV+VGTI DD R+ +PKL +
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKV 100
Score = 47.4 bits (111), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSTFNQVVLKRLFMSRTN 57
>sp|Q4PM04|RL18_IXOSC 60S ribosomal protein L18 OS=Ixodes scapularis GN=RpL18 PE=2 SV=1
Length = 188
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 59/99 (59%), Positives = 84/99 (84%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HKYDR+V R +PKS++VYL LLVK+YRFL RR+ +KFN+I+LKRLFMS+IN+P +
Sbjct: 2 GIDINHKYDRKVVRRRPKSENVYLGLLVKVYRFLARRSGAKFNRIVLKRLFMSRINKPVI 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
+++++ RFMKKP RE +AV+VGT+ DD R++ +PKL +
Sbjct: 62 SLARVTRFMKKPGRENLIAVVVGTVTDDLRLYDVPKLRL 100
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 25/27 (92%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
+YRFL RR+ +KFN+I+LKRLFMS+IN
Sbjct: 31 VYRFLARRSGAKFNRIVLKRLFMSRIN 57
>sp|Q90YV0|RL18_ICTPU 60S ribosomal protein L18 OS=Ictalurus punctatus GN=rpl18 PE=2 SV=3
Length = 188
Score = 134 bits (336), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+V RT+PKS+D+YL LLVKLYRFL RR+++ FNK++LKRLFMSK NRPP+
Sbjct: 2 GVDIRHNKDRKVHRTEPKSQDIYLRLLVKLYRFLARRSDAPFNKVVLKRLFMSKTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
A+S+++R MK RE ++AV+VGTI DD R+ IPKL +
Sbjct: 62 ALSRLIRKMKLQGRENKIAVVVGTITDDVRILNIPKLKV 100
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RR+++ FNK++LKRLFMSK N
Sbjct: 31 LYRFLARRSDAPFNKVVLKRLFMSKTN 57
>sp|Q95342|RL18_PIG 60S ribosomal protein L18 (Fragment) OS=Sus scrofa GN=RPL18 PE=3
SV=3
Length = 104
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 62/99 (62%), Positives = 79/99 (79%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+VRR +PKS+D+YL LLVKL RFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLXRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S++ R MK P REG+ AV+VGTI DD R +PKL +
Sbjct: 62 SLSRMXRKMKLPGREGKTAVVVGTITDDVRFQEVPKLKV 100
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
L RFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LXRFLARRTNSTFNQVVLKRLFMSRTN 57
>sp|P09897|RL18A_XENLA 60S ribosomal protein L18-A OS=Xenopus laevis GN=rpl18-a PE=2 SV=2
Length = 188
Score = 132 bits (333), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 80/99 (80%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GIDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK P RE + AV+VG I D R+ IPKLT+
Sbjct: 62 SMSRLIRKMKLPRRENKTAVVVGCITADVRIHDIPKLTV 100
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSSFNRVVLKRLFMSRTN 57
>sp|P02412|RL18B_XENLA 60S ribosomal protein L18-B OS=Xenopus laevis GN=rpl18-b PE=2 SV=4
Length = 188
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 79/99 (79%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GIDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNRVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK RE + AV+VG I DD R+ IPKL +
Sbjct: 62 SMSRLIRKMKLQGRENKTAVVVGYITDDVRIHDIPKLKV 100
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSSFNRVVLKRLFMSRTN 57
>sp|A3F4S0|RL18_TAEAS 60S ribosomal protein L18 OS=Taenia asiatica GN=RPL18 PE=2 SV=1
Length = 180
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 58/99 (58%), Positives = 80/99 (80%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI H+ R+V R PKS DVYL L+VKLY+FL RRT+SKFN I+ +RLFMS+INR P+
Sbjct: 2 GIDISHRNKRKVVRRNPKSGDVYLRLMVKLYKFLARRTHSKFNNIVKRRLFMSRINRAPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S++ R MKKP REG++AV++GT+ +D RM +PKLT+
Sbjct: 62 SLSRLTRQMKKPGREGKIAVVIGTVTNDIRMREVPKLTV 100
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LY+FL RRT+SKFN I+ +RLFMS+IN
Sbjct: 31 LYKFLARRTHSKFNNIVKRRLFMSRIN 57
>sp|Q2M0G4|RL18_DROPS 60S ribosomal protein L18 OS=Drosophila pseudoobscura pseudoobscura
GN=RpL18 PE=3 SV=2
Length = 189
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 87/121 (71%)
Query: 35 NGVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
+G+DI HKYDR+VRRT+PKS+DVYL LLVKLYRFL RRTN KFN+IILKRLFMSKINRPP
Sbjct: 2 SGIDINHKYDRKVRRTEPKSQDVYLRLLVKLYRFLQRRTNKKFNRIILKRLFMSKINRPP 61
Query: 95 MAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTI 154
+++ +I RF K + V+VGT+ DD R+ +PKLT+ T R+ G +
Sbjct: 62 LSLQRIARFFKAANQPESTVVVVGTVTDDARLLVVPKLTLCALHVTQTARERILKAGGEV 121
Query: 155 V 155
+
Sbjct: 122 L 122
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/27 (88%), Positives = 25/27 (92%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTN KFN+IILKRLFMSKIN
Sbjct: 32 LYRFLQRRTNKKFNRIILKRLFMSKIN 58
>sp|Q7QJM5|RL18_ANOGA 60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3
Length = 189
Score = 124 bits (311), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 58/100 (58%), Positives = 78/100 (78%), Gaps = 1/100 (1%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HK+DR+VRRT+PKS DVYL LLVKLYRFL RRT KFNKI+++RLFMS+ N PPM
Sbjct: 2 GIDINHKWDRKVRRTRPKSLDVYLSLLVKLYRFLYRRTKKKFNKIVMRRLFMSRTNHPPM 61
Query: 96 AISKIVRFMK-KPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
+++++ MK + E VAV++GT+ +D RM +PKL +
Sbjct: 62 SLNRVAHLMKLRGKDEKSVAVVIGTVTNDVRMMDVPKLNV 101
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 23/27 (85%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRT KFNKI+++RLFMS+ N
Sbjct: 31 LYRFLYRRTKKKFNKIVMRRLFMSRTN 57
>sp|Q1HR62|RL18_AEDAE 60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1
Length = 189
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/100 (59%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HK+DR+VRRTKPKS DVYL LLVKLYRFL RRT+ KFNKIIL+RLFMS+ N+PP+
Sbjct: 2 GIDINHKWDRKVRRTKPKSLDVYLRLLVKLYRFLYRRTHKKFNKIILRRLFMSRTNQPPI 61
Query: 96 AISKIVRFMK-KPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S++ + MK + E +AV+VGT+ +D R PK+ +
Sbjct: 62 SLSRVAKLMKLRGKDENTIAVVVGTVTNDDRKLYCPKMNV 101
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 10/60 (16%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN----SISE----RELDVKPTNTLALLPVFPTVT 219
LYRFL RRT+ KFNKIIL+RLFMS+ N S+S +L K NT+A+ V TVT
Sbjct: 31 LYRFLYRRTHKKFNKIILRRLFMSRTNQPPISLSRVAKLMKLRGKDENTIAV--VVGTVT 88
>sp|Q8TFH1|RL18B_SCHPO 60S ribosomal protein L18-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl18b PE=1 SV=1
Length = 187
Score = 122 bits (305), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 81/108 (75%), Gaps = 4/108 (3%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI + R+ +R+KP S++VYL+LLVKLYRFL RRT+S+FNK ILKRLF SK NRPP+
Sbjct: 2 GIDIERHHVRKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPI 61
Query: 96 AISKIVRFM--KKPTREGRVAVIVGTIVDDPRMWTIPKLTI--VRFMK 139
+ISKI K + EG+ VIVGT+ DD R+ T+PKL++ +RF K
Sbjct: 62 SISKIAALTSRKSASLEGKTTVIVGTVTDDERLLTVPKLSVAALRFTK 109
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 23/27 (85%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRT+S+FNK ILKRLF SK N
Sbjct: 31 LYRFLARRTDSRFNKAILKRLFQSKTN 57
>sp|P35980|RL18_MOUSE 60S ribosomal protein L18 OS=Mus musculus GN=Rpl18 PE=2 SV=3
Length = 188
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+VRR +PKS+D+YL LLVKLYRFL RRTNS FN+++LKRLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
++S+++R MK P RE + AV+VGT+ DD R+ +PKL +
Sbjct: 62 SLSRMIRKMKLPGRENKTAVVVGTVTDDVRILEVPKLKV 100
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNS FN+++LKRLFMS+ N
Sbjct: 31 LYRFLARRTNSTFNQVVLKRLFMSRTN 57
>sp|O45946|RL18_CAEEL 60S ribosomal protein L18 OS=Caenorhabditis elegans GN=rpl-18 PE=3
SV=1
Length = 188
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 77/120 (64%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HK+DR RRT PKS++ YL LL KLY FL RRT KFN I+LKRL MS+ NR P+
Sbjct: 2 GIDINHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
+++K+ R ++K E + V + T+ DD R++T+PK+++ R+ G I+
Sbjct: 62 SLAKLARAVQKAGNENKTVVTLSTVTDDARLYTVPKISVAALHVTEGARARILAAGGEII 121
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 146 RVAVIVGTIVDDPRMWTIPKLTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
RVA ++P + + KL Y FL RRT KFN I+LKRL MS+ N
Sbjct: 11 RVARRTAPKSENPYLRLLSKL--YAFLARRTGEKFNAIVLKRLRMSRRN 57
>sp|P69091|RL18_ORENI 60S ribosomal protein L18 OS=Oreochromis niloticus GN=rpl18 PE=2
SV=2
Length = 188
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+V R +PKS+D+YL LLVKLYRFL RR+N+ FN+++L+RLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPI 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
A+S+++R MK P RE ++AV+VGT+ DD R+ IPKL I
Sbjct: 62 AVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKI 100
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 25/29 (86%)
Query: 166 LTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
+ LYRFL RR+N+ FN+++L+RLFMS+ N
Sbjct: 29 VKLYRFLARRSNAPFNRVVLRRLFMSRTN 57
>sp|P69090|RL18_OREMO 60S ribosomal protein L18 OS=Oreochromis mossambicus GN=rpl18 PE=3
SV=2
Length = 188
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/99 (60%), Positives = 81/99 (81%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
GVDI H DR+V R +PKS+D+YL LLVKLYRFL RR+N+ FN+++L+RLFMS+ NRPP+
Sbjct: 2 GVDIRHNKDRKVHRKEPKSQDIYLRLLVKLYRFLARRSNAPFNRVVLRRLFMSRTNRPPI 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
A+S+++R MK P RE ++AV+VGT+ DD R+ IPKL I
Sbjct: 62 AVSRLIRKMKLPGRENKIAVVVGTVTDDVRIQDIPKLKI 100
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 25/29 (86%)
Query: 166 LTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
+ LYRFL RR+N+ FN+++L+RLFMS+ N
Sbjct: 29 VKLYRFLARRSNAPFNRVVLRRLFMSRTN 57
>sp|P42791|RL182_ARATH 60S ribosomal protein L18-2 OS=Arabidopsis thaliana GN=RPL18B PE=1
SV=2
Length = 187
Score = 114 bits (286), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 81/108 (75%), Gaps = 5/108 (4%)
Query: 36 GVD-ICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
G+D I ++ +RT PKS DVYL+L VKLYRFL RRTNSKFN +ILKRLFMSK+N+ P
Sbjct: 2 GIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKAP 61
Query: 95 MAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIP--KLTIVRFMKK 140
+++S++V FM +E ++AV+VGTI DD R+ IP K+T +RF ++
Sbjct: 62 LSLSRLVEFM--TGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTER 107
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 25/27 (92%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNSKFN +ILKRLFMSK+N
Sbjct: 32 LYRFLVRRTNSKFNGVILKRLFMSKVN 58
>sp|O65729|RL18_CICAR 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum GN=RPL18
PE=2 SV=1
Length = 183
Score = 114 bits (286), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 79/96 (82%), Gaps = 4/96 (4%)
Query: 44 DRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPMAISKIVRF 103
+++ +RT PKS D+YL+LLVKLYRFL RRT+S FN +ILKRLFMSK+NRPP+++S+++++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 104 MKKPTREGRVAVIVGTIVDDPRMWTIP--KLTIVRF 137
M+ +EG++ V+VG + DD R++ +P K+T ++F
Sbjct: 68 MQ--GKEGKIGVVVGAVTDDIRVYDVPTIKVTALKF 101
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRT+S FN +ILKRLFMSK+N
Sbjct: 29 LYRFLVRRTDSNFNAVILKRLFMSKVN 55
>sp|Q60P81|RL18_CAEBR 60S ribosomal protein L18 OS=Caenorhabditis briggsae GN=rpl-18 PE=3
SV=1
Length = 188
Score = 113 bits (282), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 76/120 (63%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI HK+DR RRT PKS++ YL LL KLY FL RRT KFN I+LKRL MS+ NR P+
Sbjct: 2 GIDISHKHDRVARRTAPKSENPYLRLLSKLYAFLARRTGEKFNAIVLKRLRMSRRNRQPL 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
+++K+ R +K+ E + V + T+ DD R++ +PK+++ R+ G I+
Sbjct: 62 SLAKVARVVKQAGNEKKTVVTLSTVTDDARLYEVPKISLAALHVTEGARARILAAGGEII 121
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 146 RVAVIVGTIVDDPRMWTIPKLTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
RVA ++P + + KL Y FL RRT KFN I+LKRL MS+ N
Sbjct: 11 RVARRTAPKSENPYLRLLSKL--YAFLARRTGEKFNAIVLKRLRMSRRN 57
>sp|Q940B0|RL183_ARATH 60S ribosomal protein L18-3 OS=Arabidopsis thaliana GN=RPL18C PE=2
SV=1
Length = 187
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/108 (52%), Positives = 81/108 (75%), Gaps = 5/108 (4%)
Query: 36 GVD-ICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
G+D I ++ +RT PKS DVYL+LLVKLYRFL RR+NS FN +ILKRLFMSK+N+ P
Sbjct: 2 GIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKAP 61
Query: 95 MAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIP--KLTIVRFMKK 140
+++S++V FM ++ ++AV+VGTI DD R+ IP K+T +RF ++
Sbjct: 62 LSLSRLVEFM--TGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTER 107
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RR+NS FN +ILKRLFMSK+N
Sbjct: 32 LYRFLVRRSNSNFNAVILKRLFMSKVN 58
>sp|O22254|RL181_ARATH Putative 60S ribosomal protein L18-1 OS=Arabidopsis thaliana
GN=RPL18A PE=2 SV=3
Length = 188
Score = 110 bits (275), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
Query: 36 GVD-ICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
G+D I ++ +RT+PKS DVYL+LLVK R+L RRT SKFN +ILKRLFMSK+N+ P
Sbjct: 2 GIDLIAGGKSKKTKRTEPKSDDVYLKLLVKANRYLVRRTESKFNAVILKRLFMSKVNKAP 61
Query: 95 MAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
+++S++VR+M ++G++AVIVGT+ DD R+ +P LT+
Sbjct: 62 LSLSRLVRYMD--GKDGKIAVIVGTVTDDVRIEDVPALTV 99
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/25 (76%), Positives = 22/25 (88%)
Query: 170 RFLTRRTNSKFNKIILKRLFMSKIN 194
R+L RRT SKFN +ILKRLFMSK+N
Sbjct: 34 RYLVRRTESKFNAVILKRLFMSKVN 58
>sp|Q10192|RL18A_SCHPO 60S ribosomal protein L18-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl18a PE=1 SV=1
Length = 187
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 4/108 (3%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
G+DI + ++ +R+KP S++VYL+LLVKLYRFL RRT+S+FNK ILKRLF SK NRPP+
Sbjct: 2 GIDIERHHVKKSQRSKPASENVYLKLLVKLYRFLARRTDSRFNKAILKRLFQSKTNRPPI 61
Query: 96 AISKIVRFM--KKPTREGRVAVIVGTIVDDPRMWTIPKLTI--VRFMK 139
+ISKI K + + + V+VGT+ DD RM T+PKL+I +RF K
Sbjct: 62 SISKIAALTSRKSASSQNKTTVVVGTVTDDERMLTVPKLSIAALRFTK 109
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/27 (77%), Positives = 23/27 (85%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRT+S+FNK ILKRLF SK N
Sbjct: 31 LYRFLARRTDSRFNKAILKRLFQSKTN 57
>sp|Q54VZ4|RL18_DICDI 60S ribosomal protein L18 OS=Dictyostelium discoideum GN=rpl18 PE=1
SV=1
Length = 181
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPM 95
+D ++ R+ R S++ Y LLVKLYRFL RRTNSKFNK++LKRL +K NRPP+
Sbjct: 2 AIDKSKRFLRKTGRKTLVSQNPYHALLVKLYRFLARRTNSKFNKVVLKRLLQTKTNRPPV 61
Query: 96 AISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
+IS+I MK + G++AV VGT+VDD R+ PKLT+
Sbjct: 62 SISRIANLMKD-RKSGKIAVCVGTVVDDERLLDCPKLTV 99
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 23/27 (85%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LYRFL RRTNSKFNK++LKRL +K N
Sbjct: 31 LYRFLARRTNSKFNKVVLKRLLQTKTN 57
>sp|P0CX50|RL18B_YEAST 60S ribosomal protein L18-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL18B PE=1 SV=1
Length = 186
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 36 GVDICHK-YDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
G+D K + R RT PKS +VYL+LLVKLY FL RRT++ FNK++LK LF+SKINRPP
Sbjct: 2 GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPP 61
Query: 95 MAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIV 135
+++S+I R +K+ + V+VGT+ DD R++ PK T+
Sbjct: 62 VSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVA 102
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LY FL RRT++ FNK++LK LF+SKIN
Sbjct: 32 LYTFLARRTDAPFNKVVLKALFLSKIN 58
>sp|P0CX49|RL18A_YEAST 60S ribosomal protein L18-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL18A PE=1 SV=1
Length = 186
Score = 95.5 bits (236), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
Query: 36 GVDICHK-YDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
G+D K + R RT PKS +VYL+LLVKLY FL RRT++ FNK++LK LF+SKINRPP
Sbjct: 2 GIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPP 61
Query: 95 MAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIV 135
+++S+I R +K+ + V+VGT+ DD R++ PK T+
Sbjct: 62 VSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVA 102
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSKIN 194
LY FL RRT++ FNK++LK LF+SKIN
Sbjct: 32 LYTFLARRTDAPFNKVVLKALFLSKIN 58
>sp|P0DJ17|RL18_TETTH 60S ribosomal protein L18 OS=Tetrahymena thermophila GN=RPL18 PE=1
SV=1
Length = 181
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 78/120 (65%), Gaps = 5/120 (4%)
Query: 36 GVDICHKYDRRVRRT---KPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINR 92
+D+ HK R V+R+ + KS +VY +LL+KLY+FL RRT+SKFN+ ILKRL S++N+
Sbjct: 2 AIDL-HKQGRVVKRSVVRQTKSTNVYHKLLIKLYKFLVRRTDSKFNQNILKRLSSSRLNK 60
Query: 93 PPMAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVG 152
P+++S+IV+ + + +E +V V T+ +D R+ T+PKLT+ T R+ G
Sbjct: 61 FPLSLSRIVKNLNETNKE-QVIVSTSTVTNDERLLTVPKLTVCALKFTETARKRILAAGG 119
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 166 LTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
+ LY+FL RRT+SKFN+ ILKRL S++N
Sbjct: 31 IKLYKFLVRRTDSKFNQNILKRLSSSRLN 59
>sp|Q4N438|RL18_THEPA 60S ribosomal protein L18 OS=Theileria parva GN=RPL18 PE=3 SV=1
Length = 184
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Query: 54 SKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPMAISKIVRFMKKPTREGRV 113
SK+ YL LLVKLY+FL+RRT+ FNK++LKRL M + + P+++SK+ + M+K R
Sbjct: 21 SKNPYLRLLVKLYKFLSRRTDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNT 78
Query: 114 AVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
AV+VGT+ +D RM +PKL++ T R+ G ++
Sbjct: 79 AVVVGTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVL 120
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFM 190
LY+FL+RRT+ FNK++LKRL M
Sbjct: 32 LYKFLSRRTDHSFNKVVLKRLLM 54
>sp|P50885|RL18_TRYB2 60S ribosomal protein L18 OS=Trypanosoma brucei brucei (strain
927/4 GUTat10.1) GN=RPL18-A PE=2 SV=1
Length = 193
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 9/113 (7%)
Query: 36 GVDICH-KYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
GVD+ + +RV R S + Y++LL+KLY+FL +RTNS FNK+I KRL S+ NR P
Sbjct: 2 GVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRAP 61
Query: 95 MAISKIVRFMKKPT---REGR---VAVIVGTIVDDPRMWTIPKLTI--VRFMK 139
+++S+I M++ T ++G+ +AVIVG ++DD RM IP L I +RF K
Sbjct: 62 ISLSRIAVCMRRRTVWLKKGKKSPIAVIVGDVLDDVRMTRIPALRICALRFSK 114
Score = 37.4 bits (85), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 166 LTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
+ LY+FL +RTNS FNK+I KRL S+ N
Sbjct: 30 IKLYKFLGKRTNSPFNKLIHKRLLKSRNN 58
>sp|Q4DZP2|RL18_TRYCC 60S ribosomal protein L18 OS=Trypanosoma cruzi (strain CL Brener)
GN=RPL18 PE=3 SV=1
Length = 193
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 73/113 (64%), Gaps = 9/113 (7%)
Query: 36 GVDICH-KYDRRVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
GVD+ + +RV R S + Y++LL+KLY+FL +RTNS FNK++ +RL S+ NR P
Sbjct: 2 GVDLTGVQKKKRVVRHHTYSTNPYIKLLIKLYKFLAQRTNSAFNKLVHQRLLKSRSNRAP 61
Query: 95 MAISKIVRFMKKPT------REGRVAVIVGTIVDDPRMWTIPKLTI--VRFMK 139
+++S+I MK+ + ++ +AVIVG ++DD RM IP L + +RF K
Sbjct: 62 ISLSRIAVCMKRKSVWLEKGKKAPIAVIVGDVLDDVRMARIPALRVCALRFSK 114
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 166 LTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
+ LY+FL +RTNS FNK++ +RL S+ N
Sbjct: 30 IKLYKFLAQRTNSAFNKLVHQRLLKSRSN 58
>sp|Q4UFD5|RL18_THEAN 60S ribosomal protein L18 OS=Theileria annulata GN=RPL18 PE=3 SV=2
Length = 184
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 64/102 (62%), Gaps = 2/102 (1%)
Query: 54 SKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPPMAISKIVRFMKKPTREGRV 113
SK+ YL LLVKL++FL RRT+ FNKI+LKRL M + + P+++SK+ + M+ +R
Sbjct: 21 SKNPYLRLLVKLFKFLARRTDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNT 78
Query: 114 AVIVGTIVDDPRMWTIPKLTIVRFMKKPTREGRVAVIVGTIV 155
AV++GT+ D RM +PKL++ T R+ G ++
Sbjct: 79 AVVIGTVTSDERMDVVPKLSVCALRVTETARKRILASGGEVL 120
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 8/52 (15%)
Query: 168 LYRFLTRRTNSKFNKIILKRLFMSK-------INSISERELDVKPTNTLALL 212
L++FL RRT+ FNKI+LKRL M + ++ +S + ++ +P NT ++
Sbjct: 32 LFKFLARRTDFPFNKIVLKRLLMPRRYKAPLSLSKLS-KHMESRPNNTAVVI 82
>sp|P24558|RL18_SALSA 60S ribosomal protein L18 OS=Salmo salar GN=rpl18 PE=2 SV=1
Length = 179
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 3/100 (3%)
Query: 36 GVDICHKYDRRVRRTKPKSKDVYLELLVKLYRFLTRR-TNSKFNKIILKRLFMSKINRPP 94
G+ I H DR VR +P S+D+ LLVK+YR + + + FNK++L+RLFMS+ +RPP
Sbjct: 2 GIVIQHNKDRLVRPKQPLSEDI--TLLVKIYRLPGSKCSTAPFNKVVLRRLFMSRTHRPP 59
Query: 95 MAISKIVRFMKKPTREGRVAVIVGTIVDDPRMWTIPKLTI 134
M++S+++R MK P RE R AV+VGT+ DD R+ IP L +
Sbjct: 60 MSVSRMIRKMKLPGRENRTAVVVGTVTDDVRIHEIPNLKV 99
>sp|Q4QG98|RL18_LEIMA 60S ribosomal protein L18 OS=Leishmania major GN=RPL18-A PE=3 SV=1
Length = 198
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 71/113 (62%), Gaps = 9/113 (7%)
Query: 36 GVDICHKYDR-RVRRTKPKSKDVYLELLVKLYRFLTRRTNSKFNKIILKRLFMSKINRPP 94
GVD+ + RV R S + Y++LL+KLY+FL +RT+S FNK++ +RL S+ NR P
Sbjct: 2 GVDLTGISKKSRVIRHHTYSTNPYIKLLIKLYKFLAKRTSSGFNKVVYQRLIKSRSNRAP 61
Query: 95 MAISKIVRFMKK------PTREGRVAVIVGTIVDDPRMWTIPKLTI--VRFMK 139
+++S+I MK+ ++ +AV+VG ++DD RM IP + + +RF K
Sbjct: 62 ISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRMARIPAMRVCALRFSK 114
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 166 LTLYRFLTRRTNSKFNKIILKRLFMSKIN 194
+ LY+FL +RT+S FNK++ +RL S+ N
Sbjct: 30 IKLYKFLAKRTSSGFNKVVYQRLIKSRSN 58
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,498,802
Number of Sequences: 539616
Number of extensions: 3305036
Number of successful extensions: 6574
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 6433
Number of HSP's gapped (non-prelim): 130
length of query: 244
length of database: 191,569,459
effective HSP length: 114
effective length of query: 130
effective length of database: 130,053,235
effective search space: 16906920550
effective search space used: 16906920550
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)