RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy2278
(413 letters)
>gnl|CDD|166000 PLN02359, PLN02359, ethanolaminephosphotransferase.
Length = 389
Score = 171 bits (434), Expect = 3e-49
Identities = 115/382 (30%), Positives = 175/382 (45%), Gaps = 35/382 (9%)
Query: 30 LGAHKYSCESNSILDAY-FQPWWNYLTQCLPLWLAPNLITLAGLIVNILTSLILFWYSPD 88
L +KYS +S + Y QP+W+ PLW+ PN+ITL G + + ++L+ + YSP
Sbjct: 12 LHRYKYSGVDHSYVAKYVLQPFWSRFVNFFPLWMPPNMITLMGFMFLLTSALLGYIYSPH 71
Query: 89 GISYVPRWASFLCALGIFIYQSLDAVDGKQARRTQSSSPLGELFDHGCDSISTVFVAIAA 148
+ PRW F L +F+YQ+ DAVDGKQARRT SSSPLGELFDHGCD+++ F +A
Sbjct: 72 LDTPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFETMAF 131
Query: 149 CISVNMGEYPNWMFYQCFCAICLFYCAHWQTYVCGTLKFGKVD-VTEAQVTIICMHMGTV 207
+ G F+ + FY A W+ + TL ++ TE + I C H T
Sbjct: 132 GSTAMCGR---DTFWFWVISAVPFYGATWEHFFTNTLILPVINGPTEGLMLIYCAHFFTA 188
Query: 208 LFGVEFWQYKLFYKFEM-------------RYIIGLMTIVCCSITLRYMIEVILTCGAGK 254
+ G E+W R ++ LM T+ + + + +
Sbjct: 189 IVGAEWWAQDFGKSIPFLSWVPFVSEIQTYRIVLFLMIAFAVIPTVAFNVSNVYKVVQAR 248
Query: 255 NGSTVADTSVLSPIIPLSLFMGPAIYLKVVSP-HLYEQNPVIFILTFGLVAARTTNRLVV 313
GS + L+ + P +G + +SP L P + +L GL R+++
Sbjct: 249 KGSML---LALAMLYPFVTLLGGVLIWDYLSPSDLMRNYPHLVVLGTGLAFGFLVGRMIL 305
Query: 314 AHMS------KSEMCYTDSSMLGPLALVLNCYFNNILP--DR---LLLYLSLIWSIYELI 362
AH+ K+ MC + + +A L N+ +P D LL Y + S+Y +
Sbjct: 306 AHLCDEPKGLKTNMCMSLLYLPFAIANALTARLNDGVPLVDEFWVLLGYCAFTVSLY--L 363
Query: 363 RFEKTVCLEICKFLNIELFRIK 384
F +V EI L I FRI
Sbjct: 364 HFATSVIHEITTALGIYCFRIT 385
>gnl|CDD|227383 COG5050, EPT1, sn-1,2-diacylglycerol ethanolamine- and
cholinephosphotranferases [Lipid metabolism].
Length = 384
Score = 158 bits (402), Expect = 1e-44
Identities = 104/327 (31%), Positives = 154/327 (47%), Gaps = 18/327 (5%)
Query: 22 LNNKQLKRLGAHKYSCESNSILDAYF-QPWWNYLTQCLPLWLAPNLITLAGLIVNILTSL 80
+ ++++ RL +KY E S+L YF +P+W L + +P W+APNLITL GLI + L
Sbjct: 4 ITSRRISRLKKYKYQSEDRSLLSKYFLKPFWVPLLRVIPYWMAPNLITLCGLIFIVANVL 63
Query: 81 ILFWYSPDGISYVPRWASFLCALGIFIYQSLDAVDGKQARRTQSSSPLGELFDHGCDSIS 140
+Y P PRW F ALG+F+YQ+ DA+DG+QARRT + SPLGELFDHG DSI+
Sbjct: 64 TTLYYDPCLSVDGPRWTYFSYALGLFLYQTFDALDGRQARRTGTGSPLGELFDHGVDSIN 123
Query: 141 TVFVAIAACISVNMGEYPNWMFYQCFCAICLFYCAHWQTYVCGTLKFGKVD-VTEAQVTI 199
T AI + MGE + Q F + +FY + W+ Y GTL + E V +
Sbjct: 124 TTLSAIIFVSAFGMGESFLLILSQ-FAPLFVFYLSTWEEYHTGTLYLARFSGPVEGIVLV 182
Query: 200 ICMHMGTVLFGVE-FWQYKLFY-----KFEMRYIIGLMTIVCCSITLRYMIEVILTCGAG 253
+ T ++G + FW K +G T + L
Sbjct: 183 CGSFIATGIYGKQLFWHTYAGSFEWLRKVFDVPTLGSCTFAFVCVALLSNGVCAFRNALF 242
Query: 254 KNGSTVADTSV---LSPIIPLSLFMGPAIYLKVVSPHLYEQNPVI---FILTFGLVAART 307
T + ++ LS I+ L F Y + + Q I IL +G + A
Sbjct: 243 YYERTANNCALILHLSAILGLLPFF---AYFVSIFTLVPTQPSFITLALILLYGFIFAFR 299
Query: 308 TNRLVVAHMSKSEMCYTDSSMLGPLAL 334
R++V+H++ + +L PL L
Sbjct: 300 VGRVIVSHITTQPFPMFNPPLLIPLVL 326
>gnl|CDD|140328 PTZ00307, PTZ00307, ethanolamine phosphotransferase; Provisional.
Length = 417
Score = 152 bits (386), Expect = 5e-42
Identities = 85/318 (26%), Positives = 147/318 (46%), Gaps = 36/318 (11%)
Query: 27 LKRLGAHKYSCESNSILDAY-FQPWWNYLTQCLPLWLAPNLITLAGLIVNILTSLILFWY 85
L L +KYS +SI+ Y Q +WN++ +P+ +APN IT G ++ + ++ +L ++
Sbjct: 25 LPNLKKYKYSSTDSSIISRYVLQRYWNFIVNLVPMTVAPNCITFTGFLIGMSSAALLLYF 84
Query: 86 SPDGISYVPRWASFLCALGIFIYQSLDAVDGKQARRTQSSSPLGELFDHGCDSISTVFVA 145
P W + A +F YQ+LDA+DGKQARRT + SPLGELFDHGCD+ T FV
Sbjct: 85 YFFEEGVYPSWVLYYAAFALFAYQTLDAIDGKQARRTGTGSPLGELFDHGCDAFLTPFVL 144
Query: 146 IAACISVNMGEYPNWM--FYQCFCAICLFYCAHWQTYVCGTLKFGKVDVTEAQVTIIC-M 202
+ ++ M + ++ LF A W+ + GT G V+ + + C +
Sbjct: 145 LNVSLATYM---TPVERFWLSTISSMSLF-TAIWEQFSTGTFDLGYVNGPTEGIILNCVL 200
Query: 203 HMGTVLFGVEFWQYKLFYKFEMRYIIGL-----------------------MTIVCCSIT 239
+ + ++G W +++ Y L + C
Sbjct: 201 FIVSGVYGESIWDTPAVGPYDVAYPPVLSSFFPGCSGTVHIESVRSVLFLLFLVSCPFTI 260
Query: 240 LRYMIEVILTCGAGKNGSTVADTSVLSPIIPLSLFMGPAIYLKVVSPHLYEQNPVIFILT 299
L ++ V+L + T PI+ ++ +++ VV P+L+ + P L+
Sbjct: 261 LTNVVHVVLRPTVHASKVT--PMLAALPILTMTALH---VHVFVVFPNLHVKFPFALELS 315
Query: 300 FGLVAARTTNRLVVAHMS 317
+GL+ + T RL +A +S
Sbjct: 316 YGLLMSITVTRLTLARLS 333
>gnl|CDD|166679 PLN03039, PLN03039, ethanolaminephosphotransferase; Provisional.
Length = 337
Score = 124 bits (313), Expect = 2e-32
Identities = 102/337 (30%), Positives = 152/337 (45%), Gaps = 30/337 (8%)
Query: 71 GLIVNILTSLILFWYSPDGISYVPRWASFLCALGIFIYQSLDAVDGKQARRTQSSSPLGE 130
G + + ++L+ + YSP S PRW F L +F+YQ+ DAVDGKQARRT SSSPLGE
Sbjct: 2 GFMFLLTSALLGYIYSPKLDSPPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGE 61
Query: 131 LFDHGCDSISTVFVAIAACISVNMGEYPNWMFYQCFCAICLFYCAHWQTYVCGTLKFGKV 190
LFDHGCD+++ F A+A + G W + + F+ A W+ Y TL +
Sbjct: 62 LFDHGCDALACAFEAMAFGSTAMCGRDTFWFW---VISAIPFFGATWEHYFTNTLILPVI 118
Query: 191 D-VTEAQVTIICMHMGTVLFGVEFWQYKL------------FYKFEMRYIIGLMTIVCCS 237
+ TE I C H T + G E+W + +M I M I
Sbjct: 119 NGPTEGLALIFCGHFFTAIVGAEWWAQPFGKSIPLFSWVPFLNEIQMSRAILFMMIAFAV 178
Query: 238 I-TLRYMIEVILTCGAGKNGSTVADTSVLSPIIPLSLFMGPAIYLKVVSP-HLYEQNPVI 295
I TL + + +NGS + ++L P + L + + +SP L P +
Sbjct: 179 IPTLAFNTSNVYKVVHSRNGSMLLALAMLYPFVTL---IAGVLIWDYLSPIDLIANYPHL 235
Query: 296 FILTFGLVAARTTNRLVVAHMS------KSEMCYTDSSMLGPLALVLNCYFNNILP--DR 347
+L GL R+++AH+ K+ MC + + LA L N +P D
Sbjct: 236 VVLGTGLAFGFLVGRMILAHLCDEPKGLKTNMCMSLLYLPFALANALTARLNAGVPLVDE 295
Query: 348 LLLYLSL-IWSIYELIRFEKTVCLEICKFLNIELFRI 383
+ L I+++ F +V EI + L I FRI
Sbjct: 296 FWVLLGYCIFTLSLYAHFATSVIHEITEALGIYCFRI 332
>gnl|CDD|216278 pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase.
All of these members have the ability to catalyze the
displacement of CMP from a CDP-alcohol by a second
alcohol with formation of a phosphodiester bond and
concomitant breaking of a phosphoride anhydride bond.
Length = 97
Score = 77.3 bits (191), Expect = 1e-17
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 60 LWLAPNLITLAGLIVNILTSLILFWYSPDGISYVPRWASFLCALGIFIYQSLDAVDGKQA 119
L + PNLITL LI+ +L +L+L L AL + + LD +DGK A
Sbjct: 1 LGITPNLITLLRLILGLLAALLLLLGQYL----------LLAALLLLLAVLLDGLDGKLA 50
Query: 120 RRTQSSSPLGELFDHGCDSISTVFVAIA 147
RRT SSPLG L D D +S V + +
Sbjct: 51 RRTGQSSPLGALLDSVADRLSDVALLLG 78
>gnl|CDD|223632 COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid
metabolism].
Length = 192
Score = 53.1 bits (128), Expect = 3e-08
Identities = 19/91 (20%), Positives = 31/91 (34%), Gaps = 8/91 (8%)
Query: 60 LWLAPNLITLAGLIVNILTSLILFWYSPDGISYVPRWASFLCALGIFIYQSLDAVDGKQA 119
L PN +TL + + L +L+L L + + DA+DG A
Sbjct: 11 LGNTPNQLTLLRIFLIPLFALLLLLPG--------LGLLLLALVLFLLAALTDALDGYLA 62
Query: 120 RRTQSSSPLGELFDHGCDSISTVFVAIAACI 150
R+ S G D D + + +
Sbjct: 63 RKWGQVSRFGAFLDPVADKLLDAALLLGLVA 93
>gnl|CDD|224104 COG1183, PssA, Phosphatidylserine synthase [Lipid metabolism].
Length = 234
Score = 46.1 bits (110), Expect = 1e-05
Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 62 LAPNLITLAGLIVNILTSLILFWYSPDGISYVPRWASFLCALGIFIYQSLDAVDGKQARR 121
L PNLIT GL + L S++ + A L L + LD +DG+ AR+
Sbjct: 10 LLPNLITALGLFLG-LLSIVA------ALEGRFEAALLLILLALI----LDGLDGRVARK 58
Query: 122 TQSSSPLGELFDHGCDSIS-TVFVAIAACISVNMGEYPNWMFYQCFCAICLFYCA 175
+ S G D D +S V A+ S + + A
Sbjct: 59 LNAKSAFGAELDSLADLVSFGVAPALLLYSSGLNTGPLGLLAALLYVLCGALRLA 113
>gnl|CDD|233024 TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase. Alternate names:
phosphatidylglycerophosphate synthase; glycerophosphate
phosphatidyltransferase; PGP synthase. A number of
related enzymes are quite similar in both sequence and
catalytic activity, including Saccharamyces cerevisiae
YDL142c, now known to be a cardiolipin synthase. There
may be problems with incorrect transitive annotation of
near homologs as authentic
CDP-diacylglycerol--glycerol-3-phosphate
3-phosphatidyltransferase [Fatty acid and phospholipid
metabolism, Biosynthesis].
Length = 182
Score = 34.2 bits (79), Expect = 0.054
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 64 PNLITLAGLIVNILTSLILFWYSPDGISYVPRWASFLCALGIFIYQSL-DAVDGKQARRT 122
PN +TL +I + ILF+ V + L +FI+ ++ D +DG AR+
Sbjct: 4 PNWLTLFRIIALPI--FILFFLENVLPIQVSPFIGAL----LFIFAAVTDWLDGYLARKW 57
Query: 123 QSSSPLGELFDHGCDSISTVFVAIAACISVNMGEYPNWMF 162
S G+ D D V V I V G P W
Sbjct: 58 NQVSNFGKFLDPLADK---VLVLAVLIILVYHGYVPAWFV 94
>gnl|CDD|220795 pfam10520, Kua-UEV1_localn, Kua-ubiquitin conjugating enzyme hybrid
localisation domain. This domain is part of the
transcript of the fusion of two genes, the UEV1, an
enzymatically inactive variant of the E2
ubiquitin-conjugating enzymes that regulate
non-canonical elongation of ubiquitin chains, and Kua,
an otherwise unknown gene. UEV1A is a nuclear protein,
whereas both Kua and Kua-UEV localise to cytoplasmic
structures, indicating that the addition of a Kua domain
to UEV confers new biological properties. UEV1-Kua
carries the B domain with its characteristic double
histidine motif, and it is probably this domain which
determines the cytoplasmic localisation. It is
postulated that this hybrid transcript could
preferentially direct the variant polyubiquitination of
substrates closely associated with the cytoplasmic face
of the endoplasmic reticulum, possibly, although not
necessarily, in conjunction with membrane-bound
ubiquitin-conjugating enzymes.
Length = 178
Score = 33.9 bits (78), Expect = 0.075
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 65 NLITLAGLIVNILTSLILFWYSPDGISYVPRWASFLCALGIFI 107
LA + V + + L +P ++Y W FL IF+
Sbjct: 53 GDNCLASIPVLAILAATLATNAPSALTYWYGWHVFLLTFAIFV 95
>gnl|CDD|182763 PRK10832, PRK10832, phosphatidylglycerophosphate synthetase;
Provisional.
Length = 182
Score = 32.1 bits (73), Expect = 0.27
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 92 YVP-RWASFLCALGIFIYQSLDAVDGKQARRTQSSSPLGELFDHGCDSISTVFVAIA 147
Y+P WA F+CAL + D DG ARR S+ G D D V VAIA
Sbjct: 25 YLPFTWAPFVCALIFCVAAVTDWFDGFLARRWNQSTRFGAFLDPVADK---VMVAIA 78
>gnl|CDD|224652 COG1738, yhhQ, Uncharacterized member of the PurR regulon [General
function prediction only].
Length = 233
Score = 30.8 bits (70), Expect = 1.2
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 42 ILDAYFQPWWNYLTQCLPLWLAPNLITL-AGLIVNILTSLILFWYSPDG 89
+LD + T LWL PN TL + LI ++ I F+ SPDG
Sbjct: 140 LLDVWVFNRLKRRTGGKSLWLRPNASTLVSQLIDTVIFFFIAFYVSPDG 188
>gnl|CDD|218638 pfam05559, DUF763, Protein of unknown function (DUF763). This
family consists of several uncharacterized bacterial and
archaeal proteins of unknown function.
Length = 319
Score = 30.7 bits (70), Expect = 1.4
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 8/50 (16%)
Query: 59 PLWLAPNLITLAGLIVNILTSLILFWYSPDG-ISYV--PRW-ASFLCALG 104
P WLA + L+G IV + I+ Y PD + + P W +F +G
Sbjct: 13 PPWLAKRMKKLSGAIVEV----IVEEYGPDELLERLSDPFWFQAFNNVIG 58
>gnl|CDD|232991 TIGR00473, pssA, CDP-diacylglycerol--serine
O-phosphatidyltransferase. This enzyme,
CDP-diacylglycerol--serine O-phosphatidyltransferase, is
involved in phospholipid biosynthesis catalyzing the
reaction CDP-diacylglycerol + L-serine = CMP +
L-1-phosphatidylserine. Members of this family do not
bear any significant sequence similarity to the
corresponding E.coli protein [Fatty acid and
phospholipid metabolism, Biosynthesis].
Length = 151
Score = 29.7 bits (67), Expect = 1.5
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 73 IVNILTSLILFWYSPDGISYVPRWASFLCALGIFIYQSLDAVDGKQARRTQSSSPLGELF 132
++N + + + Y A FL L +F D +DG+ AR+T S G+
Sbjct: 2 MLNAFSGFLSILSL---LRYTIVRACFLILLSMF----FDFLDGRVARKTNRVSDFGKEL 54
Query: 133 DHGCDSIS 140
D D +S
Sbjct: 55 DSLADVVS 62
>gnl|CDD|180643 PRK06645, PRK06645, DNA polymerase III subunits gamma and tau;
Validated.
Length = 507
Score = 30.2 bits (68), Expect = 2.5
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 331 PLALVLNCYFNNILPDRLLLYLSLIWSIY-----EL-IRFEKTVCLEICKFLNIELFRIK 384
P+ N +IL L +LS++W IY E+ I + + E+ +I +
Sbjct: 316 PIYESFNDRTKSILDKISLPHLSILWQIYNKGVGEIKISYNQLTETEMLVIKSIYSTSLP 375
Query: 385 VLSVADNNKSKNNQNFNPNTKR 406
+L+ D N NQ+ NP K+
Sbjct: 376 LLTDFDGNNQNLNQSINPEIKK 397
>gnl|CDD|217128 pfam02592, DUF165, Uncharacterized ACR, YhhQ family COG1738.
Length = 143
Score = 28.3 bits (64), Expect = 3.7
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 41 SILDAYFQPWWNYLTQCLPLWLAPNLITLAGLIV-NILTSLILFWYSPDGISYVPRWAS 98
+LD T+ LWL N TL +V ++ I F+ GI S
Sbjct: 80 QLLDVLVFHRLKRRTKGKHLWLRNNGSTLVSQLVDTLIFFTIAFY----GIFPAETLLS 134
>gnl|CDD|224333 COG1415, COG1415, Uncharacterized conserved protein [Function
unknown].
Length = 373
Score = 28.9 bits (65), Expect = 4.8
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 57 CLPLWLAPNLITLAGLIVNILTSLILFWYSPDG----ISYVPRW-ASFLCALG 104
+P WL P + L+G I+ ++ Y D ++ P W SF +G
Sbjct: 15 HVPPWLLPRMKKLSGAILELIVEE----YGTDELLRRLAD-PFWFQSFNNVIG 62
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.328 0.140 0.451
Gapped
Lambda K H
0.267 0.0757 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 20,699,148
Number of extensions: 1980310
Number of successful extensions: 2385
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2366
Number of HSP's successfully gapped: 59
Length of query: 413
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 314
Effective length of database: 6,546,556
Effective search space: 2055618584
Effective search space used: 2055618584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 60 (26.8 bits)