Query psy2280
Match_columns 162
No_of_seqs 169 out of 716
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 20:40:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2280.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2280hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qfa_A Baculoviral IAP repeat- 100.0 8E-38 2.7E-42 241.9 14.2 127 27-154 5-136 (142)
2 3mup_A Baculoviral IAP repeat- 100.0 3.1E-32 1.1E-36 206.2 6.7 102 29-138 12-114 (122)
3 2vm5_A Baculoviral IAP repeat- 100.0 3E-32 1E-36 201.7 5.8 85 29-114 13-98 (106)
4 3hl5_A Baculoviral IAP repeat- 100.0 9.9E-32 3.4E-36 195.3 7.0 86 27-122 4-90 (95)
5 1jd5_A DIAP1, apoptosis 1 inhi 100.0 2E-31 6.7E-36 202.4 8.0 91 27-125 16-107 (124)
6 2i3h_A Baculoviral IAP repeat- 100.0 1.2E-31 4.2E-36 205.6 6.1 90 27-124 38-128 (133)
7 3d9t_A Baculoviral IAP repeat- 100.0 1.7E-31 5.8E-36 194.7 5.3 86 30-123 7-93 (97)
8 2poi_A Baculoviral IAP repeat- 100.0 4.9E-31 1.7E-35 191.5 7.4 77 30-107 14-91 (94)
9 3m1d_A Baculoviral IAP repeat- 100.0 7.5E-31 2.6E-35 187.3 5.4 77 30-107 5-82 (85)
10 1se0_A Apoptosis 1 inhibitor; 100.0 1.2E-30 4.3E-35 195.9 6.5 84 30-117 8-92 (116)
11 1g73_C Inhibitors of apoptosis 100.0 1.6E-30 5.5E-35 196.5 5.7 80 27-109 18-98 (121)
12 2qra_D XIAP, baculoviral IAP r 100.0 3.3E-30 1.1E-34 192.3 7.2 77 30-107 31-108 (111)
13 1i4o_C X-linked IAP, baculovir 100.0 2.2E-30 7.5E-35 200.4 5.0 88 25-116 32-120 (141)
14 3siq_A Apoptosis 1 inhibitor; 100.0 6.8E-30 2.3E-34 196.5 7.1 83 31-117 31-114 (136)
15 3t6p_A Baculoviral IAP repeat- 99.9 7.1E-28 2.4E-32 208.6 7.8 86 33-126 2-88 (345)
16 1ef4_A Subunit N, DNA-directed 61.7 0.63 2.2E-05 30.1 -2.0 12 71-82 3-14 (55)
17 1twf_J DNA-directed RNA polyme 49.9 3.2 0.00011 28.0 -0.2 15 71-85 4-19 (70)
18 4ayb_N DNA-directed RNA polyme 44.7 3.8 0.00013 27.3 -0.4 11 72-82 5-15 (66)
19 1w53_A Phosphoserine phosphata 43.3 46 0.0016 22.9 5.0 39 118-156 2-40 (84)
20 1lyp_A CAP18; lipopolysacchari 32.6 40 0.0014 18.9 2.6 11 147-157 7-17 (32)
21 1fxk_C Protein (prefoldin); ar 31.5 1.4E+02 0.0046 21.1 6.8 59 103-161 73-133 (133)
22 3l39_A Putative PHOU-like phos 26.3 1.8E+02 0.0061 22.5 6.5 27 135-161 61-87 (227)
23 2j6y_A Phosphoserine phosphata 25.5 99 0.0034 22.3 4.5 39 118-156 2-40 (111)
24 1a6b_B Momulv, zinc finger pro 22.4 16 0.00056 21.7 -0.2 12 69-80 8-19 (40)
25 2js3_A Uncharacterized protein 22.3 38 0.0013 23.5 1.6 32 69-105 51-82 (96)
26 3lf9_A 4E10_D0_1IS1A_001_C (T1 20.8 1.3E+02 0.0044 22.1 4.3 35 124-158 81-115 (121)
No 1
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=100.00 E-value=8e-38 Score=241.89 Aligned_cols=127 Identities=35% Similarity=0.701 Sum_probs=118.0
Q ss_pred CCCCCCCCccHHHHHhchhhCccCCC-CCCHHHHHhccceecC-C---CeEEEeecCCccCCCCCCCChHHHhhhcCCCC
Q psy2280 27 NIEIASPMMFYTNRLATFTNWTFKSG-NCTAEHMAHAGFYLIQ-D---DCTKCVFCYKELDGWEVTDYPWDEHKSHKPDC 101 (162)
Q Consensus 27 ~~~~~~~~~~~~~Rl~TF~~WP~~~~-~~spe~LA~AGFyytg-~---D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C 101 (162)
.+|.+..|.+++.|++||.+||+... .++|+.||+|||||+| + |.|+||+|+++|.+|+++||||.||++|+|+|
T Consensus 5 ~~p~~~~~~~~~~Rl~TF~~WP~~~~~~~~p~~LA~AGFyy~g~~~~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~p~C 84 (142)
T 2qfa_A 5 TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGC 84 (142)
T ss_dssp CCCTTTGGGSHHHHHHTCCSCSCCSSCSSCHHHHHHTTEEECCBTTBTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTC
T ss_pred CCCCcccccCHHHHHHHHhcCCccCCcCCCHHHHHHcCCCcCCCCCCCCEEEcCCCCCEecccCCCCCHHHHHHHHCcCC
Confidence 35688899999999999999999874 5799999999999999 4 99999999999999999999999999999999
Q ss_pred ccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy2280 102 PFVQLNKRDLTTCHIDEFIVLNSAVVKNKMMETLQQGKEELTRMFDDFKAKIT 154 (162)
Q Consensus 102 ~Fv~~~k~d~~~~tv~efl~l~~~r~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 154 (162)
+|+...|+ ..++|+++|+++.+.|.++.+.+..+..++.|+++....|..+.
T Consensus 85 ~F~~~~k~-~~~~t~~~~l~l~~~~~~~~~~~~~~~r~~~F~~~p~~~~~~~~ 136 (142)
T 2qfa_A 85 AFLSVKKQ-FEELTLGEFLKLDRERAKNKIAKETNNKKKEFEETAKKVRRAIE 136 (142)
T ss_dssp GGGGCCSC-GGGCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceecccc-cchhhHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999 89999999999999999999999999999999998887665544
No 2
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.97 E-value=3.1e-32 Score=206.25 Aligned_cols=102 Identities=29% Similarity=0.497 Sum_probs=90.3
Q ss_pred CCCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccccc
Q psy2280 29 EIASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLN 107 (162)
Q Consensus 29 ~~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~ 107 (162)
+....|.+++.|++||.+||+.. .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+...
T Consensus 12 ~~~~~m~s~~~Rl~TF~~WP~~~-~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~~~ 90 (122)
T 3mup_A 12 ISNLSMQTHAARMRTFMYWPSSV-PVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRM 90 (122)
T ss_dssp CSCGGGCSHHHHHHGGGGCCTTC-SSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHH
T ss_pred cCCccccCHHHHHHHHhcCCCcc-cCCHHHHHHCCCeEeCCCCeEEecCcCCEecCCCCCCCHHHHHHHHCcCCcchhhc
Confidence 46778999999999999999876 5899999999999999 999999999999999999999999999999999999999
Q ss_pred ccCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q psy2280 108 KRDLTTCHIDEFIVLNSAVVKNKMMETLQQG 138 (162)
Q Consensus 108 k~d~~~~tv~efl~l~~~r~~~~~~k~~~~~ 138 (162)
|| .||++-+..+....++..++..
T Consensus 91 kg-------~~fi~~i~~~~~~~~~~~~~~~ 114 (122)
T 3mup_A 91 KG-------QEFVDEIQGRYPHLLEQLLSTS 114 (122)
T ss_dssp HC-------HHHHHHHHHHCTTHHHHHC---
T ss_pred Cc-------HHHHHHHHHhchhhhhhhhhhh
Confidence 99 8998887777666665555443
No 3
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=201.72 Aligned_cols=85 Identities=29% Similarity=0.531 Sum_probs=76.4
Q ss_pred CCCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccccc
Q psy2280 29 EIASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLN 107 (162)
Q Consensus 29 ~~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~ 107 (162)
|+++.|.+++.|++||.+||+....++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+...
T Consensus 13 ~~~~~~~~~~~Rl~TF~~WP~~~~~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv~~~ 92 (106)
T 2vm5_A 13 GGKMRYQEEEARLASFRNWPFYVQGISPCVLSEAGFVFTGKQDTVQCFSCGGCLGNWEEGDDPWKEHAKWFPKCEFLRSK 92 (106)
T ss_dssp ---CTTSSHHHHHHGGGGCCGGGTTSCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHHHHH
T ss_pred CCchhhcCHHHHHHHHhcCCCCcccCCHHHHHHcCCCCcCCCCEEEccccCCEecCCCCCCCHHHHHHHHCcCCcchhhc
Confidence 6778999999999999999987522789999999999999 999999999999999999999999999999999999999
Q ss_pred ccCCCcc
Q psy2280 108 KRDLTTC 114 (162)
Q Consensus 108 k~d~~~~ 114 (162)
|| .+.+
T Consensus 93 Kg-~~~i 98 (106)
T 2vm5_A 93 KS-SEEI 98 (106)
T ss_dssp HC-CTTS
T ss_pred cC-HHHH
Confidence 98 5544
No 4
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.97 E-value=9.9e-32 Score=195.32 Aligned_cols=86 Identities=30% Similarity=0.680 Sum_probs=80.6
Q ss_pred CCCCCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccc
Q psy2280 27 NIEIASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQ 105 (162)
Q Consensus 27 ~~~~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~ 105 (162)
..|.++.|.+++.|++||.+||+. ++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+.
T Consensus 4 ~~p~~~~m~~~~~Rl~TF~~Wp~~---~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~f~~ 80 (95)
T 3hl5_A 4 MLPRNPSMADYEARIFTFGTWIYS---VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLL 80 (95)
T ss_dssp SSCSCGGGCSHHHHHHTTTTCCSS---SCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCCCCccccCHHHHHHHHcCCCCC---CCHHHHHhCCCeEcCCCCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCcchH
Confidence 357788999999999999999986 799999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCcccHHHHHHH
Q psy2280 106 LNKRDLTTCHIDEFIVL 122 (162)
Q Consensus 106 ~~k~d~~~~tv~efl~l 122 (162)
..|| .||++-
T Consensus 81 ~~kg-------~~fv~~ 90 (95)
T 3hl5_A 81 EQKG-------QEYINN 90 (95)
T ss_dssp HHTC-------HHHHHH
T ss_pred hhcc-------HHHHHH
Confidence 9999 777753
No 5
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.97 E-value=2e-31 Score=202.35 Aligned_cols=91 Identities=29% Similarity=0.519 Sum_probs=82.7
Q ss_pred CCCCCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccc
Q psy2280 27 NIEIASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQ 105 (162)
Q Consensus 27 ~~~~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~ 105 (162)
..|.++.|.+++.|++||.+||+.. .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|++
T Consensus 16 ~~p~~p~~~~e~~Rl~TF~~WP~~~-~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~ 94 (124)
T 1jd5_A 16 YFPQYPEYAIETARLRTFEAWPRNL-KQKPHQLAEAGFFYTGVGDRVRCFSCGGGLMDWNDNDEPWEQHALWLSQCRFVK 94 (124)
T ss_dssp CCCSCGGGCSHHHHHHHGGGCCTTC-SSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCCCChhhhCHHHHHHHHhhCCCCc-cCCHHHHHHcCCCCcCCCCEEEecCCCCEecCCCCCCCHHHHHHHHCcCCceee
Confidence 4578899999999999999999976 5899999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCcccHHHHHHHHHH
Q psy2280 106 LNKRDLTTCHIDEFIVLNSA 125 (162)
Q Consensus 106 ~~k~d~~~~tv~efl~l~~~ 125 (162)
+.|+ .+|..-+..
T Consensus 95 ~~kg-------~~fv~~v~~ 107 (124)
T 1jd5_A 95 LMKG-------QLYIDTVAA 107 (124)
T ss_dssp HHHC-------HHHHHHHHH
T ss_pred cccc-------hHHHHHHHh
Confidence 9998 556554433
No 6
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.97 E-value=1.2e-31 Score=205.57 Aligned_cols=90 Identities=32% Similarity=0.616 Sum_probs=82.5
Q ss_pred CCCCCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccc
Q psy2280 27 NIEIASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQ 105 (162)
Q Consensus 27 ~~~~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~ 105 (162)
..+.++.|.+++.|++||.+||... .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+.
T Consensus 38 ~~~~~~~m~~e~~RL~SF~~WP~~~-~~~pe~LA~AGFYYtg~~D~V~Cf~C~~~L~~We~~DDP~~EH~r~~P~C~Fv~ 116 (133)
T 2i3h_A 38 RGPAFPGMGSEELRLASFYDWPLTA-EVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPGCQFLL 116 (133)
T ss_dssp -CCSCGGGCCHHHHHHTTTTCSCTT-TSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCCCchhhhCHHHHHHHHhcCCCCc-CCCHHHHHHcCCCCcCCCCEEEecccCCEeCCCCCCCCHHHHHHHHCcCCceeh
Confidence 4578899999999999999999865 5899999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCcccHHHHHHHHH
Q psy2280 106 LNKRDLTTCHIDEFIVLNS 124 (162)
Q Consensus 106 ~~k~d~~~~tv~efl~l~~ 124 (162)
..|+ .+|.+-+.
T Consensus 117 ~~Kg-------~~fv~~v~ 128 (133)
T 2i3h_A 117 RSKG-------QEYINNIH 128 (133)
T ss_dssp HHHC-------HHHHHHHC
T ss_pred hccc-------HHHHHHHh
Confidence 9999 67765543
No 7
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.97 E-value=1.7e-31 Score=194.67 Aligned_cols=86 Identities=34% Similarity=0.592 Sum_probs=78.6
Q ss_pred CCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCccccccc
Q psy2280 30 IASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLNK 108 (162)
Q Consensus 30 ~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~k 108 (162)
....|.+++.|++||.+||+.. .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+...|
T Consensus 7 ~~~~m~~~~~Rl~TF~~Wp~~~-~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~Ddp~~eH~r~~p~C~f~~~~k 85 (97)
T 3d9t_A 7 SNLSMQTHAARMRTFMYWPSSV-PVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMK 85 (97)
T ss_dssp -CGGGCSHHHHHHGGGGCCTTS-SSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTBHHHHHHH
T ss_pred cchhhhCHHHHHHHHhcCCCcc-cCCHHHHHHcCCCCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHhCccChhhHhhc
Confidence 4567999999999999999876 5899999999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCcccHHHHHHHH
Q psy2280 109 RDLTTCHIDEFIVLN 123 (162)
Q Consensus 109 ~d~~~~tv~efl~l~ 123 (162)
+ .+|.+-.
T Consensus 86 g-------~~~v~~~ 93 (97)
T 3d9t_A 86 G-------QEFVDEI 93 (97)
T ss_dssp C-------HHHHHHH
T ss_pred c-------HHHHHHH
Confidence 9 6666543
No 8
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.97 E-value=4.9e-31 Score=191.54 Aligned_cols=77 Identities=29% Similarity=0.514 Sum_probs=70.9
Q ss_pred CCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccccc
Q psy2280 30 IASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLN 107 (162)
Q Consensus 30 ~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~ 107 (162)
...+|.+++.|++||.+||+.. .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|++..
T Consensus 14 ~~~~~~~e~~Rl~TF~~WP~~~-~~~p~~LA~AGFyytg~~D~V~Cf~C~~~l~~We~~DdP~~eH~r~~P~C~Fv~~~ 91 (94)
T 2poi_A 14 KEEEFVEEFNRLKTFANFPSGS-PVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGF 91 (94)
T ss_dssp ---CTTSHHHHHGGGTTCCTTS-SSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTTT
T ss_pred cchhhhCHHHHHHHHhcCCCCc-cCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcccccc
Confidence 4568999999999999999876 5899999999999999 999999999999999999999999999999999999754
No 9
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.96 E-value=7.5e-31 Score=187.29 Aligned_cols=77 Identities=29% Similarity=0.542 Sum_probs=71.0
Q ss_pred CCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccccc
Q psy2280 30 IASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLN 107 (162)
Q Consensus 30 ~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~ 107 (162)
+..+|.+++.|++||.+||+.. .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+.-.
T Consensus 5 ~~~~~~~e~~Rl~TF~~WP~~~-~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~F~~~~ 82 (85)
T 3m1d_A 5 SKYDFSCELYRMSTYSTFPAGV-PVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNL 82 (85)
T ss_dssp --CCHHHHHHHHHGGGGCCTTC-SSCHHHHHHTTEEECSSTTCEEETTTCCEECSCCTTCCHHHHHHHHCTTCHHHHHH
T ss_pred cHHHhHhHHHHHHHHhcCCCCC-cCCHHHHHHCCCeEeCCCCEEEeCCcCCEecCCCCCCCHHHHHHHHCccCcchhcc
Confidence 3457899999999999999976 5899999999999999 999999999999999999999999999999999998744
No 10
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.96 E-value=1.2e-30 Score=195.89 Aligned_cols=84 Identities=30% Similarity=0.643 Sum_probs=76.4
Q ss_pred CCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCccccccc
Q psy2280 30 IASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLNK 108 (162)
Q Consensus 30 ~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~k 108 (162)
.+.+|.+++.|++||.+||+.. ++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|++..+
T Consensus 8 ~~~~~~~e~~Rl~TF~~WP~~~--~~~~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv~~~~ 85 (116)
T 1se0_A 8 RMNDLNREETRLKTFTDWPLDW--LDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLRRRT 85 (116)
T ss_dssp --CCTTBHHHHHTTCTTCCCTT--SCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCTTTTTCC
T ss_pred hhhhhcCHHHHHHHHhhCCCCc--CCHHHHHHcCCcCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHHCccCcceeeec
Confidence 5668999999999999999964 899999999999999 9999999999999999999999999999999999999877
Q ss_pred cCCCcccHH
Q psy2280 109 RDLTTCHID 117 (162)
Q Consensus 109 ~d~~~~tv~ 117 (162)
. .+++++
T Consensus 86 ~--~nvp~~ 92 (116)
T 1se0_A 86 T--NNVPIN 92 (116)
T ss_dssp C--CCBCSC
T ss_pred c--CccccC
Confidence 5 666664
No 11
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.96 E-value=1.6e-30 Score=196.54 Aligned_cols=80 Identities=31% Similarity=0.721 Sum_probs=76.0
Q ss_pred CCCCCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccc
Q psy2280 27 NIEIASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQ 105 (162)
Q Consensus 27 ~~~~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~ 105 (162)
..|.++.|.+++.|++||.+||+. ++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+.
T Consensus 18 ~~p~~~~m~~~~~Rl~TF~~Wp~~---~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~P~C~Fv~ 94 (121)
T 1g73_C 18 NLPRNPSMADYEARIFTFGTWIYS---VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLL 94 (121)
T ss_dssp -CCSCGGGCSHHHHHHTTTTCCSS---SCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCCCChhhhCHHHHHHHHccCCCC---CCHHHHHHcCCCCcCCCCEEEcCcCCCCcCCCCCCCCHHHHHHHHCcCCcchh
Confidence 567888999999999999999986 689999999999999 9999999999999999999999999999999999999
Q ss_pred cccc
Q psy2280 106 LNKR 109 (162)
Q Consensus 106 ~~k~ 109 (162)
..|+
T Consensus 95 ~~kg 98 (121)
T 1g73_C 95 EQKG 98 (121)
T ss_dssp HHHH
T ss_pred hccc
Confidence 9888
No 12
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.96 E-value=3.3e-30 Score=192.34 Aligned_cols=77 Identities=29% Similarity=0.514 Sum_probs=70.8
Q ss_pred CCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccccc
Q psy2280 30 IASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLN 107 (162)
Q Consensus 30 ~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~ 107 (162)
...+|.+++.|++||.+||... .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++++|+|+|++..
T Consensus 31 ~~~~m~~e~~RL~TF~~WP~~~-~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~sP~C~Fv~~~ 108 (111)
T 2qra_D 31 KEEEFVEEFNRLKTFANFPSGS-PVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGF 108 (111)
T ss_dssp ---CTTSHHHHHHTTTTCCTTC-SSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTTT
T ss_pred hchhhhCHHHHHHHHhcCCCCc-cCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcchhhc
Confidence 4568999999999999999876 5899999999999999 999999999999999999999999999999999999754
No 13
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.96 E-value=2.2e-30 Score=200.35 Aligned_cols=88 Identities=31% Similarity=0.567 Sum_probs=78.7
Q ss_pred hcCCCCCCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcc
Q psy2280 25 MYNIEIASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPF 103 (162)
Q Consensus 25 ~~~~~~~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~F 103 (162)
....|.+..|.+++.|++||.+||+.. .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|
T Consensus 32 ~~~~p~~~~m~~e~~Rl~TF~~WP~~~-~~~p~~LA~AGFyY~g~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~F 110 (141)
T 1i4o_C 32 DTIYPRNPAMYSEEARLKSFQNWPDYA-HLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFF 110 (141)
T ss_pred cccCCCChhhhCHHHHHHHHhcCCCCc-cCCHHHHHHcCCcCcCCCCEEEeccCCCEecCCCCCCCHHHHHHHHCcCCcc
Confidence 345567778999999999999999876 5899999999999999 99999999999999999999999999999999999
Q ss_pred ccccccCCCcccH
Q psy2280 104 VQLNKRDLTTCHI 116 (162)
Q Consensus 104 v~~~k~d~~~~tv 116 (162)
+. .+. . ++++
T Consensus 111 v~-~~~-~-nvp~ 120 (141)
T 1i4o_C 111 VL-GRN-L-NIRS 120 (141)
T ss_pred cC-ccc-c-CCCc
Confidence 97 333 4 6655
No 14
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.96 E-value=6.8e-30 Score=196.45 Aligned_cols=83 Identities=30% Similarity=0.661 Sum_probs=77.1
Q ss_pred CCCCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccccccc
Q psy2280 31 ASPMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLNKR 109 (162)
Q Consensus 31 ~~~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~k~ 109 (162)
..+|.+++.|++||.+||+.. ++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|++..+.
T Consensus 31 ~~dy~~e~~RL~TF~~WP~~~--~~p~~LA~AGFYYtG~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~~~ 108 (136)
T 3siq_A 31 MNDLNREETRLKTFTDWPLDW--LDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLRRRTT 108 (136)
T ss_dssp CCCTTBHHHHHHTTTTCCCTT--SCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCTTTTTCCC
T ss_pred HHhhhCHHHHHHHHccCCCCc--CCHHHHHHCCCeEcCCCCeEEEeccCCEecCCCCCCCHHHHHHHHCcCCcceecccC
Confidence 456999999999999999975 799999999999999 99999999999999999999999999999999999997665
Q ss_pred CCCcccHH
Q psy2280 110 DLTTCHID 117 (162)
Q Consensus 110 d~~~~tv~ 117 (162)
.+++++
T Consensus 109 --~Nvpi~ 114 (136)
T 3siq_A 109 --NNVPIN 114 (136)
T ss_dssp --CCBCSC
T ss_pred --CCccCC
Confidence 677775
No 15
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=99.94 E-value=7.1e-28 Score=208.59 Aligned_cols=86 Identities=34% Similarity=0.595 Sum_probs=79.5
Q ss_pred CCccHHHHHhchhhCccCCCCCCHHHHHhccceecC-CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCccccccccCC
Q psy2280 33 PMMFYTNRLATFTNWTFKSGNCTAEHMAHAGFYLIQ-DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQLNKRDL 111 (162)
Q Consensus 33 ~~~~~~~Rl~TF~~WP~~~~~~spe~LA~AGFyytg-~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~k~d~ 111 (162)
.|.++++|++||.+||+.. .++|+.||+|||||+| +|.|+||+|+++|.+|+++||||.||++|+|+|+|+...||
T Consensus 2 ~m~~~~~Rl~tF~~WP~~~-~~~~~~lA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~f~~~~kg-- 78 (345)
T 3t6p_A 2 SMQTHAARMRTFMYWPSSV-PVQPEQLASAGFYYVGRNDDVKCFSCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKG-- 78 (345)
T ss_dssp TTSSHHHHHHHGGGSCTTC-SSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHHC--
T ss_pred CCccHHHHHHHHhhCCCcc-cCCHHHHHhCCCeecCCCCeEEecCCCCCccCCCCCCCHHHHHHHhCCCCccHHHhcc--
Confidence 6899999999999999886 5899999999999999 99999999999999999999999999999999999999999
Q ss_pred CcccHHHHHHHHHHH
Q psy2280 112 TTCHIDEFIVLNSAV 126 (162)
Q Consensus 112 ~~~tv~efl~l~~~r 126 (162)
.+|++-...+
T Consensus 79 -----~~~i~~~~~~ 88 (345)
T 3t6p_A 79 -----QEFVDEIQGR 88 (345)
T ss_dssp -----HHHHHHHHHH
T ss_pred -----HHHHHHHHHh
Confidence 6666655543
No 16
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=61.71 E-value=0.63 Score=30.14 Aligned_cols=12 Identities=25% Similarity=0.628 Sum_probs=10.3
Q ss_pred eEEEeecCCccC
Q psy2280 71 CTKCVFCYKELD 82 (162)
Q Consensus 71 ~V~Cf~C~~~L~ 82 (162)
-|+||.||+.+.
T Consensus 3 PVRCFTCGkvi~ 14 (55)
T 1ef4_A 3 PVRCLSCGKPVS 14 (55)
T ss_dssp SSSCSCTTSCCH
T ss_pred CeecCCCCCChh
Confidence 378999999986
No 17
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=49.90 E-value=3.2 Score=28.05 Aligned_cols=15 Identities=33% Similarity=0.822 Sum_probs=12.0
Q ss_pred eEEEeecCCccCC-CC
Q psy2280 71 CTKCVFCYKELDG-WE 85 (162)
Q Consensus 71 ~V~Cf~C~~~L~~-We 85 (162)
-|+||.||+.+.+ |+
T Consensus 4 PVRCFTCGkvi~~~we 19 (70)
T 1twf_J 4 PVRCFSCGKVVGDKWE 19 (70)
T ss_dssp CSBCTTTCCBCTTCHH
T ss_pred CeecCCCCCChHHHHH
Confidence 4789999999974 44
No 18
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=44.70 E-value=3.8 Score=27.34 Aligned_cols=11 Identities=18% Similarity=0.570 Sum_probs=10.0
Q ss_pred EEEeecCCccC
Q psy2280 72 TKCVFCYKELD 82 (162)
Q Consensus 72 V~Cf~C~~~L~ 82 (162)
|+||.||+.+.
T Consensus 5 VRCFTCGkvi~ 15 (66)
T 4ayb_N 5 IRCFTCGSLIA 15 (66)
T ss_dssp SBCTTTCCBCH
T ss_pred cccCCCcHhHH
Confidence 79999999995
No 19
>1w53_A Phosphoserine phosphatase RSBU; stress, kinase, hydrolase; 1.6A {Bacillus subtilis} SCOP: a.186.1.2
Probab=43.27 E-value=46 Score=22.87 Aligned_cols=39 Identities=13% Similarity=0.083 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy2280 118 EFIVLNSAVVKNKMMETLQQGKEELTRMFDDFKAKITEK 156 (162)
Q Consensus 118 efl~l~~~r~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 156 (162)
+|.+-.++|++..+....+..-+..-..+..+.++++||
T Consensus 2 ~~m~~~~~~Y~~iL~~yl~~~~E~~Ly~~q~fs~~~iek 40 (84)
T 1w53_A 2 DFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEH 40 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHcccHHHHHHHHHhhHHHHHc
Confidence 566777788999998888888888888888888888876
No 20
>1lyp_A CAP18; lipopolysaccharide-binding protein; NMR {Oryctolagus cuniculus} SCOP: j.17.1.1
Probab=32.58 E-value=40 Score=18.86 Aligned_cols=11 Identities=45% Similarity=0.803 Sum_probs=4.7
Q ss_pred HHhHHHHHHHh
Q psy2280 147 DDFKAKITEKI 157 (162)
Q Consensus 147 ~~~~~~~~~~~ 157 (162)
..++++|-|||
T Consensus 7 rkfrnkikekl 17 (32)
T 1lyp_A 7 RKFRNKIKEKL 17 (32)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33444444444
No 21
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=31.49 E-value=1.4e+02 Score=21.06 Aligned_cols=59 Identities=7% Similarity=0.114 Sum_probs=39.1
Q ss_pred cccccccCCCcccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhHHHHHHHhhhcc
Q psy2280 103 FVQLNKRDLTTCHIDEFIVLNSAVVKNK--MMETLQQGKEELTRMFDDFKAKITEKINRVA 161 (162)
Q Consensus 103 Fv~~~k~d~~~~tv~efl~l~~~r~~~~--~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (162)
++.++.|-.-+.|++|..++...|.+.. --+.+++.++.+++.+.....+|-+.+..+|
T Consensus 73 ~v~lG~g~~vE~~~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~~~~~~ 133 (133)
T 1fxk_C 73 IMSVGAGVAIKKNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELLAAVA 133 (133)
T ss_dssp EEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEcCCCEEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4444444345668899999999888775 2333666667777777777777766665543
No 22
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=26.30 E-value=1.8e+02 Score=22.47 Aligned_cols=27 Identities=11% Similarity=0.142 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHhhhcc
Q psy2280 135 LQQGKEELTRMFDDFKAKITEKINRVA 161 (162)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (162)
..+.+..++...++.+++++..|++..
T Consensus 61 ~~~~I~~lE~~aD~i~~~i~~~L~~~f 87 (227)
T 3l39_A 61 YYKQIKDMEREGDRLTHLIFDELSTTF 87 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 446778888999999999999999854
No 23
>2j6y_A Phosphoserine phosphatase RSBU; hydrolase, partner switching, protein phosphatase, RSBT, stress; 1.85A {Bacillus subtilis} PDB: 2j70_A 2j6z_A
Probab=25.54 E-value=99 Score=22.34 Aligned_cols=39 Identities=10% Similarity=0.063 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q psy2280 118 EFIVLNSAVVKNKMMETLQQGKEELTRMFDDFKAKITEK 156 (162)
Q Consensus 118 efl~l~~~r~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 156 (162)
+|.+-.+++++..+..+....-+..-..+..+.++++||
T Consensus 2 ~~~~~~~~~Y~~iL~~yl~~~~E~~Ly~aq~fsr~liek 40 (111)
T 2j6y_A 2 DFREVIEQRYHQLLSRYIAELTKTSLYQAQKFSRKTIEH 40 (111)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHc
Confidence 456667788888888888887777778888888888886
No 24
>1a6b_B Momulv, zinc finger protein NCP10; nucleocapsid protein, intercalation, nucleic acid, retrovirus, viral protein/DNA complex; HET: DNA; NMR {Synthetic} SCOP: g.40.1.1
Probab=22.36 E-value=16 Score=21.67 Aligned_cols=12 Identities=25% Similarity=0.791 Sum_probs=10.5
Q ss_pred CCeEEEeecCCc
Q psy2280 69 DDCTKCVFCYKE 80 (162)
Q Consensus 69 ~D~V~Cf~C~~~ 80 (162)
.+.++||.|+..
T Consensus 8 ~~~~~C~~Cgk~ 19 (40)
T 1a6b_B 8 LDRDQCAYCKEK 19 (40)
T ss_dssp CCSSSCSSSCCT
T ss_pred CCCCeeeECCCC
Confidence 678999999986
No 25
>2js3_A Uncharacterized protein; homodimer, protein structure, spectroscopy, structural G PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris}
Probab=22.31 E-value=38 Score=23.54 Aligned_cols=32 Identities=28% Similarity=0.607 Sum_probs=24.3
Q ss_pred CCeEEEeecCCccCCCCCCCChHHHhhhcCCCCcccc
Q psy2280 69 DDCTKCVFCYKELDGWEVTDYPWDEHKSHKPDCPFVQ 105 (162)
Q Consensus 69 ~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~ 105 (162)
+-.-+|-.|+..+- |..+.|- .+|.|+|+.+.
T Consensus 51 GA~NqCklC~ASVp-Wl~tGDe----I~H~pDCpV~i 82 (96)
T 2js3_A 51 GAHNQCKLCGASVP-WLQTGDE----IKHADDCPVVI 82 (96)
T ss_dssp CEEEEETTSSCEEE-TTCCCSS----CCCCTTSTHHH
T ss_pred CccccCcccCccch-hhhcCcc----cccCCCchHHH
Confidence 66779999999985 7665443 37899999864
No 26
>3lf9_A 4E10_D0_1IS1A_001_C (T161); epitope-scaffold, immune system; 2.00A {Artificial gene}
Probab=20.78 E-value=1.3e+02 Score=22.11 Aligned_cols=35 Identities=3% Similarity=0.067 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Q psy2280 124 SAVVKNKMMETLQQGKEELTRMFDDFKAKITEKIN 158 (162)
Q Consensus 124 ~~r~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (162)
..+....|+|...+.+.++.+++...-..|||-|.
T Consensus 81 ~kr~e~eIQKLTDkyIkkID~ll~~KEKEI~~~~~ 115 (121)
T 3lf9_A 81 ISQALWEIQKLTDVAVKKIDEVLAAKEKELMEVLE 115 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCT
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666778889999999999999999999998663
Done!