BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2284
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R331|ZNHI1_MOUSE Zinc finger HIT domain-containing protein 1 OS=Mus musculus
GN=Znhit1 PE=2 SV=1
Length = 154
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 99/166 (59%), Gaps = 21/166 (12%)
Query: 11 RIKDANKQRVLDEATRQRRARKALESLESDNFHDDPHADLV-MNKKAPKFQETLDAKSGS 69
R +D ++RVLD A RQRR + LE+LE+DNF DDPHA L + K+ P+F + D
Sbjct: 9 RSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADTGK-- 66
Query: 70 RKKKSKSAEYYKLKTMEGLFHKTNQQNYIFRFRKSLAQMIEEDKALNSQGSAYENAEAKP 129
KKK +++KL RFRK+ ++EE S+G Y A A P
Sbjct: 67 -KKKKTRGDHFKL-----------------RFRKNFQALLEEQNLSASEGPNYLTACAGP 108
Query: 130 SKFPNRHFCAVCGFPSNYTCVPCGARYCCVRCLGTHQDTRCLKWTA 175
P R FCAVCGFPS YTCV CGARYC VRCLGTHQ+TRCLKWT
Sbjct: 109 PSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 154
>sp|O43257|ZNHI1_HUMAN Zinc finger HIT domain-containing protein 1 OS=Homo sapiens
GN=ZNHIT1 PE=1 SV=1
Length = 154
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 100/168 (59%), Gaps = 21/168 (12%)
Query: 9 SGRIKDANKQRVLDEATRQRRARKALESLESDNFHDDPHADLV-MNKKAPKFQETLDAKS 67
S R +D ++RVLD A RQRR + LE+LE+DNF DDPHA L + K+ P+F + D
Sbjct: 7 SVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADTGK 66
Query: 68 GSRKKKSKSAEYYKLKTMEGLFHKTNQQNYIFRFRKSLAQMIEEDKALNSQGSAYENAEA 127
KKK +++KL RFRK+ ++EE ++G Y A A
Sbjct: 67 ---KKKKTRGDHFKL-----------------RFRKNFQALLEEQNLSVAEGPNYLTACA 106
Query: 128 KPSKFPNRHFCAVCGFPSNYTCVPCGARYCCVRCLGTHQDTRCLKWTA 175
P P R FCAVCGFPS YTCV CGARYC VRCLGTHQ+TRCLKWT
Sbjct: 107 GPPSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 154
>sp|Q24JY4|ZNHI1_BOVIN Zinc finger HIT domain-containing protein 1 OS=Bos taurus GN=ZNHIT1
PE=2 SV=1
Length = 154
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 100/168 (59%), Gaps = 21/168 (12%)
Query: 9 SGRIKDANKQRVLDEATRQRRARKALESLESDNFHDDPHADLV-MNKKAPKFQETLDAKS 67
S R +D ++RVLD A RQRR + LE+LE+DNF DDPHA L + K+ P+F + D
Sbjct: 7 SVRSQDPGQRRVLDRAARQRRINRQLEALENDNFQDDPHAGLPQLGKRLPQFDDDADTGK 66
Query: 68 GSRKKKSKSAEYYKLKTMEGLFHKTNQQNYIFRFRKSLAQMIEEDKALNSQGSAYENAEA 127
KKK +++KL RFRK+ ++EE ++G Y A A
Sbjct: 67 ---KKKKTRGDHFKL-----------------RFRKNFQALLEEQNLSVAEGPNYLTACA 106
Query: 128 KPSKFPNRHFCAVCGFPSNYTCVPCGARYCCVRCLGTHQDTRCLKWTA 175
P P R FCAVCGFPS YTCV CGARYC VRCLGTHQ+TRCLKWT
Sbjct: 107 GPPSRPQRPFCAVCGFPSPYTCVSCGARYCTVRCLGTHQETRCLKWTV 154
>sp|Q54NW0|ZNHI1_DICDI Zinc finger HIT domain-containing protein 1 homolog
OS=Dictyostelium discoideum GN=znhit1 PE=3 SV=1
Length = 177
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 121 AYENAEAKPSKFPNRHFCAVCGFPSNYTCVPCGARYCCVRCLGTHQDTRC 170
Y + ++KPS FP RHFC++CG+ YTC C +RYC ++C H +TRC
Sbjct: 122 TYISVQSKPSIFPPRHFCSICGYIGAYTCKQCSSRYCSIKCFNYHNETRC 171
>sp|O59669|VPS71_SCHPO SWR1 complex subunit vps71 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=vps71 PE=1 SV=2
Length = 139
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 65/162 (40%), Gaps = 42/162 (25%)
Query: 17 KQR-VLDEATRQRRARKALESLESDNFHDDPHADLVMNKKAPK--FQETLDAKSGSRKKK 73
KQR V+D TR+R+ ++ L LE DNF D + + PK Q + S R
Sbjct: 17 KQRSVVDPVTRERQLKRNLADLEKDNFSD-------IRFEIPKDLLQRRVLPISVRR--- 66
Query: 74 SKSAEYYKLKTMEGLFHKTNQQNYIFRFRKSLAQMIEEDKALNSQGSAYENAEAKPSKFP 133
I RK+ ++E + S Y AKPS P
Sbjct: 67 ------------------------ILSSRKTFVNYLDE-----TPNSRYNTCVAKPSYKP 97
Query: 134 NRHFCAVCGFPSNYTCVPCGARYCCVRCLGTHQDTRCLKWTA 175
R FC VCG+ Y C CG YC C H +TRC+K A
Sbjct: 98 PRKFCNVCGYWGKYACQNCGTSYCSKGCEVIHSETRCMKVYA 139
>sp|Q4U9I8|SEY1_THEAN Protein SEY1 homolog OS=Theileria annulata GN=TA08650 PE=3 SV=1
Length = 918
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 12/59 (20%)
Query: 120 SAYENAEAKPSKFPNRHFCAVCGFPSNYTCVPCGAR--------YCCVRCLGTHQDTRC 170
+AY + A+P RH C +CGF +NY C C R YC +RCL H +T C
Sbjct: 855 AAYASGPARP----QRHLCVICGFFANYKCRNCATRRIEAINSYYCSLRCLEVHNETNC 909
>sp|Q03433|VPS71_YEAST Vacuolar protein sorting-associated protein 71 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS71 PE=1
SV=1
Length = 280
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 138 CAVCG-FPSNYTCVPCGARYCCVRCLGTHQDTRC 170
C++CG + S +CV CG + C V C H +TRC
Sbjct: 244 CSICGGYDSISSCVNCGNKICSVSCFKLHNETRC 277
>sp|Q9UTE8|IES6_SCHPO Chromatin-remodeling complex subunit ies6 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ies6 PE=3 SV=1
Length = 117
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 100 RFRKSLAQMIEEDKALNSQGS-AYENAEAKPSKFPNRHFCAVCGFPSNYTCVPCGAR--- 155
R ++L Q+I+ D N +Y + EA PS P +C V G + YT R
Sbjct: 29 RRNRNLRQIIQNDPVQNEPSKFSYSSIEAPPSVLPQPKYCDVTGLLAIYTDPKTRLRYHN 88
Query: 156 ---YCCVRCLGTHQDTRCLKW 173
Y +R L + D LK
Sbjct: 89 KEIYGLIRELPSGADQEYLKL 109
>sp|Q9NR09|BIRC6_HUMAN Baculoviral IAP repeat-containing protein 6 OS=Homo sapiens GN=BIRC6
PE=1 SV=2
Length = 4857
Score = 33.1 bits (74), Expect = 0.82, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 63 LDAKSGSRKKKSKSA--EYYKLKTMEGLFHKTNQQNYIFRFRKSLAQMIEEDKALNSQGS 120
L +S +R K S+ Y K + L H Q N + +K+L + +E++K +++GS
Sbjct: 2208 LHTQSLNRSSKGSSSLDRLYSRKIRKQLVHHKQQLNLLKAKQKALVEQMEKEKIQSNKGS 2267
Query: 121 AYE--NAEAKPSKFPNRHF 137
+Y+ +AK + ++HF
Sbjct: 2268 SYKLLVEQAKLKQATSKHF 2286
>sp|A5DSM4|GET2_LODEL Golgi to ER traffic protein 2 OS=Lodderomyces elongisporus (strain
ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL
YB-4239) GN=GET2 PE=3 SV=1
Length = 357
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 77 AEYYKLKTMEGLFHKTNQQNYIFRFRKSLAQMIEE 111
A YY L T GLFH +NQ+++I + +L+ + +
Sbjct: 284 ATYYLLFTKLGLFHASNQKSFILKGISTLSMFVPQ 318
>sp|O88738|BIRC6_MOUSE Baculoviral IAP repeat-containing protein 6 OS=Mus musculus GN=Birc6
PE=1 SV=2
Length = 4882
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 69 SRKKKSKSAEYYKLKTMEGLFHKTNQQNYIFRFRKSLAQMIEEDKALNSQGSAYE--NAE 126
S K S Y K + L H Q N + +K+L + +E++K +++GS+Y+ +
Sbjct: 2239 SSKGGSSLDRLYSRKIRKQLVHHKQQLNLLKAKQKALVEQMEKEKIQSNKGSSYKLLVEQ 2298
Query: 127 AKPSKFPNRHF 137
AK + ++HF
Sbjct: 2299 AKLKQATSKHF 2309
>sp|Q9UHR6|ZNHI2_HUMAN Zinc finger HIT domain-containing protein 2 OS=Homo sapiens
GN=ZNHIT2 PE=1 SV=1
Length = 403
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 7/32 (21%)
Query: 141 CGF-------PSNYTCVPCGARYCCVRCLGTH 165
CGF P+ YTC C A YC +RC TH
Sbjct: 7 CGFCPAGEVQPARYTCPRCNAPYCSLRCYRTH 38
>sp|P46973|HIT1_YEAST Protein HIT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=HIT1 PE=1 SV=1
Length = 164
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 138 CAVC-GFPSNYTCVPCGARYCCVRC 161
C +C G Y C CG RYC ++C
Sbjct: 8 CGICRGVDGKYKCPKCGVRYCSLKC 32
>sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana
GN=XBAT35 PE=2 SV=1
Length = 462
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 115 LNSQGSAYENAEAKPSKFPNRHFCAVC-GFPSNYTCVPCGARYCCVRCL 162
L S S + E + + N CA+C PS CVPCG C+ CL
Sbjct: 388 LPSAASLPASTEGERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCL 436
>sp|Q9QY66|ZNHI2_MOUSE Zinc finger HIT domain-containing protein 2 OS=Mus musculus
GN=Znhit2 PE=2 SV=2
Length = 399
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 7/34 (20%)
Query: 139 AVCGF-------PSNYTCVPCGARYCCVRCLGTH 165
+CGF P+ YTC C A YC +RC H
Sbjct: 5 GLCGFCPAGEALPARYTCPRCNAPYCSLRCYRAH 38
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.129 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,099,735
Number of Sequences: 539616
Number of extensions: 2290014
Number of successful extensions: 7912
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 7883
Number of HSP's gapped (non-prelim): 57
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)