Query psy2284
Match_columns 175
No_of_seqs 141 out of 209
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 20:45:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yqq_A Zinc finger HIT domain- 99.3 2E-13 6.7E-18 93.4 1.4 42 131-173 8-49 (56)
2 1x4s_A Protein FON, zinc finge 99.3 1.7E-13 5.9E-18 94.6 0.7 42 128-171 4-49 (59)
3 2dj8_A Protein CBFA2T1; zinc f 96.2 0.0022 7.5E-08 42.7 2.1 37 131-167 11-48 (60)
4 2odd_A Protein CBFA2T1; MYND z 95.8 0.0022 7.7E-08 43.0 0.7 34 134-167 16-50 (64)
5 2od1_A Protein CBFA2T1; zinc f 95.4 0.0038 1.3E-07 41.6 0.9 34 134-167 12-46 (60)
6 2yqp_A Probable ATP-dependent 95.4 0.0045 1.5E-07 42.5 1.1 35 132-166 16-50 (60)
7 2jw6_A Deformed epidermal auto 95.2 0.0044 1.5E-07 39.6 0.6 33 135-167 9-42 (52)
8 2d8q_A BLU protein, zinc finge 95.2 0.0069 2.4E-07 41.9 1.7 36 132-167 12-48 (70)
9 1vd4_A Transcription initiatio 89.6 0.19 6.5E-06 31.8 2.3 35 135-169 14-62 (62)
10 1wg2_A Zinc finger (AN1-like) 89.2 0.26 9E-06 34.1 2.8 31 128-159 8-41 (64)
11 3qww_A SET and MYND domain-con 88.3 0.12 4E-06 45.8 0.7 33 133-165 47-82 (433)
12 1x4w_A Hypothetical protein FL 86.9 0.34 1.2E-05 33.8 2.3 25 134-159 14-44 (67)
13 3qwp_A SET and MYND domain-con 86.7 0.17 6E-06 44.3 0.9 32 134-165 46-80 (429)
14 4rxn_A Rubredoxin; electron tr 86.0 0.31 1.1E-05 32.5 1.6 10 146-155 36-45 (54)
15 1wfh_A Zinc finger (AN1-like) 85.6 0.55 1.9E-05 32.5 2.8 27 132-159 12-41 (64)
16 1wfp_A Zinc finger (AN1-like) 84.5 0.64 2.2E-05 33.0 2.8 27 132-159 22-51 (74)
17 3n71_A Histone lysine methyltr 83.9 0.26 8.8E-06 44.3 0.6 33 133-165 47-82 (490)
18 6rxn_A Rubredoxin; electron tr 83.8 0.36 1.2E-05 31.2 1.1 21 135-155 4-39 (46)
19 3j20_Y 30S ribosomal protein S 81.0 1.1 3.8E-05 29.1 2.7 36 120-156 5-47 (50)
20 1e8j_A Rubredoxin; iron-sulfur 80.3 0.75 2.6E-05 30.2 1.7 9 146-154 36-44 (52)
21 1wfl_A Zinc finger protein 216 78.9 1.8 6.2E-05 30.7 3.4 31 128-159 18-51 (74)
22 3a43_A HYPD, hydrogenase nicke 78.5 0.56 1.9E-05 35.9 0.7 14 131-144 66-79 (139)
23 1wff_A Riken cDNA 2810002D23 p 77.7 1.4 4.6E-05 32.0 2.5 26 133-159 23-52 (85)
24 3pwf_A Rubrerythrin; non heme 76.8 0.91 3.1E-05 35.9 1.5 24 132-155 135-162 (170)
25 1yk4_A Rubredoxin, RD; electro 73.3 1.1 3.8E-05 29.3 1.0 10 146-155 35-44 (52)
26 1lv3_A Hypothetical protein YA 72.9 0.67 2.3E-05 32.4 -0.2 32 133-164 7-38 (68)
27 2vrw_B P95VAV, VAV1, proto-onc 72.3 2.2 7.5E-05 36.5 2.9 31 132-163 354-390 (406)
28 2kn9_A Rubredoxin; metalloprot 72.1 0.87 3E-05 32.7 0.3 23 133-155 25-69 (81)
29 2aus_D NOP10, ribosome biogene 71.6 0.91 3.1E-05 31.0 0.3 24 135-158 5-29 (60)
30 1h7b_A Anaerobic ribonucleotid 70.0 0.96 3.3E-05 42.5 0.1 24 132-155 537-567 (605)
31 2apo_B Ribosome biogenesis pro 69.6 1.2 4.3E-05 30.2 0.6 24 135-158 6-30 (60)
32 2d8v_A Zinc finger FYVE domain 67.4 3 0.0001 29.1 2.2 28 132-159 5-33 (67)
33 1dx8_A Rubredoxin; electron tr 66.7 1.8 6.3E-05 29.9 1.0 10 134-143 6-15 (70)
34 2v3b_B Rubredoxin 2, rubredoxi 66.5 1.3 4.3E-05 29.4 0.1 10 146-155 36-45 (55)
35 2k4x_A 30S ribosomal protein S 63.7 6 0.00021 26.0 3.0 25 132-156 15-46 (55)
36 1yuz_A Nigerythrin; rubrythrin 63.7 1.9 6.5E-05 34.8 0.7 23 133-155 169-195 (202)
37 1weo_A Cellulose synthase, cat 63.2 2.8 9.6E-05 30.9 1.5 12 145-156 57-68 (93)
38 2kdx_A HYPA, hydrogenase/ureas 62.9 2.7 9.4E-05 30.8 1.4 25 131-155 69-99 (119)
39 1lko_A Rubrerythrin all-iron(I 62.8 2 6.7E-05 34.2 0.6 23 133-155 153-180 (191)
40 1s24_A Rubredoxin 2; electron 62.5 1.7 5.7E-05 31.6 0.1 10 133-142 33-42 (87)
41 1twf_L ABC10-alpha, DNA-direct 62.5 2.8 9.5E-05 29.0 1.3 24 132-155 25-54 (70)
42 4gne_A Histone-lysine N-methyl 61.1 3 0.0001 30.9 1.3 27 132-158 55-81 (107)
43 2l8e_A Polyhomeotic-like prote 60.8 2.2 7.5E-05 27.8 0.5 30 136-165 19-48 (49)
44 3h0g_L DNA-directed RNA polyme 58.3 5 0.00017 27.4 1.9 29 128-156 14-48 (63)
45 1faq_A RAF-1; transferase, ser 58.0 4.8 0.00017 25.0 1.7 24 132-155 11-36 (52)
46 2yuu_A NPKC-delta, protein kin 57.2 7 0.00024 26.9 2.6 31 131-162 24-60 (83)
47 3c5k_A HD6, histone deacetylas 56.8 6.6 0.00023 29.0 2.6 29 132-160 21-50 (109)
48 4b6d_A RAC GTPase-activating p 56.7 4.5 0.00015 26.9 1.5 23 132-154 16-43 (61)
49 2zjr_Z 50S ribosomal protein L 56.5 4.4 0.00015 27.2 1.4 23 132-154 27-51 (60)
50 2lcq_A Putative toxin VAPC6; P 55.9 3.4 0.00012 31.5 0.9 24 132-155 129-157 (165)
51 2lv2_A Insulinoma-associated p 55.7 3.1 0.00011 28.7 0.6 35 132-166 25-76 (85)
52 1ptq_A Protein kinase C delta 55.2 6.9 0.00023 24.0 2.1 25 131-155 7-37 (50)
53 1l1o_C Replication protein A 7 55.0 8.9 0.00031 30.0 3.2 55 100-155 5-71 (181)
54 2m0e_A Zinc finger and BTB dom 54.0 3.4 0.00012 20.4 0.4 21 146-166 2-22 (29)
55 1rik_A E6APC1 peptide; E6-bind 53.8 3.1 0.0001 20.9 0.2 22 146-167 2-23 (29)
56 2ct7_A Ring finger protein 31; 53.5 6.2 0.00021 27.4 1.8 40 133-172 23-72 (86)
57 1znf_A 31ST zinc finger from X 52.7 3.4 0.00012 20.4 0.3 21 147-167 2-22 (27)
58 1y02_A CARP2, FYVE-ring finger 52.6 5.8 0.0002 29.9 1.6 37 120-159 7-48 (120)
59 2lk0_A RNA-binding protein 5; 51.8 5.5 0.00019 23.4 1.1 22 134-155 4-28 (32)
60 3ky9_A Proto-oncogene VAV; cal 50.2 9.5 0.00033 34.5 3.0 34 130-164 524-563 (587)
61 3v2d_5 50S ribosomal protein L 49.8 5.8 0.0002 26.6 1.1 22 132-153 27-50 (60)
62 2eli_A Protein kinase C alpha 49.4 11 0.00036 26.2 2.5 24 132-155 25-54 (85)
63 2m0f_A Zinc finger and BTB dom 48.9 4.1 0.00014 20.2 0.2 20 146-165 2-21 (29)
64 2lvr_A Zinc finger and BTB dom 52.0 4.2 0.00014 20.4 0.0 22 146-167 3-24 (30)
65 2kvf_A Zinc finger and BTB dom 46.1 4.4 0.00015 20.2 0.0 21 146-166 3-23 (28)
66 3uej_A NPKC-delta, protein kin 46.0 11 0.00038 24.6 2.1 25 131-155 16-46 (65)
67 2enz_A NPKC-theta, protein kin 45.3 12 0.00042 24.4 2.2 24 132-155 20-49 (65)
68 2lvu_A Zinc finger and BTB dom 51.1 4.5 0.00015 20.0 0.0 20 147-166 3-22 (26)
69 2k1p_A Zinc finger RAN-binding 45.1 14 0.00048 21.7 2.2 23 133-155 4-29 (33)
70 3lrq_A E3 ubiquitin-protein li 44.9 8.9 0.0003 26.7 1.5 10 147-156 59-68 (100)
71 2row_A RHO-associated protein 44.4 8.9 0.0003 27.3 1.5 25 130-154 30-62 (84)
72 2kvh_A Zinc finger and BTB dom 43.6 5 0.00017 20.0 0.0 20 146-165 3-22 (27)
73 1paa_A Yeast transcription fac 43.3 5.9 0.0002 19.9 0.3 20 146-165 2-21 (30)
74 1vk6_A NADH pyrophosphatase; 1 43.1 6.8 0.00023 32.5 0.8 22 134-155 106-134 (269)
75 3zyq_A Hepatocyte growth facto 42.2 35 0.0012 27.5 4.9 25 135-159 164-193 (226)
76 2kfq_A FP1; protein, de novo p 41.6 6.4 0.00022 20.8 0.3 22 146-167 2-23 (32)
77 1klr_A Zinc finger Y-chromosom 41.6 5.9 0.0002 19.6 0.1 20 147-166 3-22 (30)
78 3irb_A Uncharacterized protein 41.4 6.6 0.00022 30.0 0.4 21 135-155 47-70 (145)
79 2m0d_A Zinc finger and BTB dom 41.3 6 0.00021 19.6 0.1 21 146-166 3-23 (30)
80 2kvg_A Zinc finger and BTB dom 40.9 4.5 0.00016 20.4 -0.4 21 146-166 3-23 (27)
81 1wfe_A Riken cDNA 2310008M20 p 40.7 15 0.00053 26.1 2.3 32 128-159 18-53 (86)
82 3qt1_I DNA-directed RNA polyme 40.5 9.1 0.00031 29.3 1.1 24 132-155 21-55 (133)
83 2ffw_A Midline-1; B-BOX, ring 39.7 12 0.00041 25.6 1.5 36 132-168 27-67 (78)
84 2ysm_A Myeloid/lymphoid or mix 39.5 15 0.0005 26.3 2.0 25 132-156 4-32 (111)
85 2lvt_A Zinc finger and BTB dom 45.6 6.2 0.00021 19.8 0.0 21 146-166 2-22 (29)
86 2yu4_A E3 SUMO-protein ligase 38.2 17 0.00057 25.1 2.1 27 131-157 3-31 (94)
87 2els_A Zinc finger protein 406 38.1 7.2 0.00025 20.8 0.1 21 146-166 9-29 (36)
88 1pft_A TFIIB, PFTFIIBN; N-term 37.9 13 0.00043 23.1 1.3 21 136-156 6-34 (50)
89 1jm7_B BARD1, BRCA1-associated 37.9 20 0.00068 25.4 2.5 23 134-156 42-65 (117)
90 3dzy_D Peroxisome proliferator 37.7 3.6 0.00012 36.2 -1.8 26 129-154 44-75 (419)
91 1dvp_A HRS, hepatocyte growth 37.3 51 0.0018 26.1 5.1 25 135-159 161-190 (220)
92 2dmi_A Teashirt homolog 3; zin 37.2 10 0.00035 25.6 0.8 21 146-166 80-100 (115)
93 1p7a_A BF3, BKLF, kruppel-like 37.2 7.3 0.00025 20.8 0.1 21 146-166 11-31 (37)
94 1vfy_A Phosphatidylinositol-3- 37.1 18 0.00061 24.3 2.1 24 136-159 12-40 (73)
95 2w0t_A Lethal(3)malignant brai 36.8 14 0.00048 23.6 1.3 12 154-165 26-37 (43)
96 2db6_A SH3 and cysteine rich d 36.8 16 0.00054 24.6 1.7 32 131-163 24-61 (74)
97 2elm_A Zinc finger protein 406 36.7 7.1 0.00024 21.3 -0.1 20 146-165 9-28 (37)
98 2cot_A Zinc finger protein 435 36.6 13 0.00045 23.4 1.2 34 134-167 17-67 (77)
99 2lce_A B-cell lymphoma 6 prote 36.5 15 0.0005 23.0 1.5 33 134-166 16-65 (74)
100 2i5o_A DNA polymerase ETA; zin 36.5 13 0.00044 23.0 1.1 12 145-156 8-19 (39)
101 1t1h_A Gspef-atpub14, armadill 36.5 15 0.00052 23.8 1.6 27 132-158 5-32 (78)
102 2ctu_A Zinc finger protein 483 36.3 3.8 0.00013 25.1 -1.4 33 135-167 18-60 (73)
103 1srk_A Zinc finger protein ZFP 35.9 8.1 0.00028 20.3 0.1 21 146-166 7-27 (35)
104 2ee8_A Protein ODD-skipped-rel 35.9 16 0.00054 24.1 1.6 36 130-165 12-64 (106)
105 2g45_A Ubiquitin carboxyl-term 35.7 23 0.00079 26.8 2.7 28 133-160 32-60 (129)
106 2e72_A POGO transposable eleme 35.1 7 0.00024 25.7 -0.3 28 145-172 11-38 (49)
107 2gnr_A Conserved hypothetical 34.9 9.6 0.00033 29.3 0.4 22 134-155 46-70 (145)
108 2elx_A Zinc finger protein 406 34.9 8.6 0.00029 20.1 0.1 21 146-166 7-27 (35)
109 1ard_A Yeast transcription fac 34.5 8.8 0.0003 18.9 0.1 19 147-165 3-21 (29)
110 1rim_A E6APC2 peptide; E6-bind 34.2 8.2 0.00028 20.6 -0.1 20 147-166 3-22 (33)
111 2enn_A NPKC-theta, protein kin 34.1 19 0.00064 24.5 1.8 23 132-154 31-59 (77)
112 1y8f_A UNC-13 homolog A, MUNC1 33.4 19 0.00066 23.6 1.7 29 132-161 21-55 (66)
113 1dl6_A Transcription factor II 33.2 25 0.00086 22.9 2.2 26 131-156 7-40 (58)
114 3j21_g 50S ribosomal protein L 33.0 14 0.00048 24.2 0.9 22 134-155 13-37 (51)
115 2elt_A Zinc finger protein 406 33.0 9.3 0.00032 20.1 0.0 21 146-166 9-29 (36)
116 2ytb_A Zinc finger protein 32; 32.4 14 0.00046 20.2 0.7 23 145-167 10-32 (42)
117 1wys_A Riken cDNA 2310008M20 p 32.2 22 0.00077 24.8 1.9 24 136-159 15-42 (75)
118 2puy_A PHD finger protein 21A; 32.1 18 0.0006 23.3 1.3 21 136-156 6-27 (60)
119 2y43_A E3 ubiquitin-protein li 32.0 19 0.00065 24.5 1.5 9 147-155 58-66 (99)
120 2c2l_A CHIP, carboxy terminus 31.7 22 0.00075 27.9 2.1 30 129-158 202-232 (281)
121 2elr_A Zinc finger protein 406 31.2 11 0.00037 19.9 0.1 20 146-165 9-28 (36)
122 2jun_A Midline-1; B-BOX, TRIM, 31.2 15 0.00051 25.2 0.9 31 136-167 4-39 (101)
123 3h0g_I DNA-directed RNA polyme 31.1 13 0.00045 27.2 0.6 22 135-156 4-36 (113)
124 1x4v_A Hypothetical protein LO 31.1 30 0.001 23.4 2.3 26 134-159 11-40 (63)
125 2wbt_A B-129; zinc finger; 2.7 31.1 12 0.0004 25.9 0.3 32 135-166 74-120 (129)
126 2zet_C Melanophilin; complex, 30.7 20 0.0007 27.8 1.7 31 134-165 67-103 (153)
127 2fiy_A Protein FDHE homolog; F 30.1 13 0.00045 32.0 0.5 22 21-42 23-44 (309)
128 2ckl_A Polycomb group ring fin 30.0 19 0.00065 25.0 1.3 9 147-155 51-59 (108)
129 4ayb_P DNA-directed RNA polyme 29.8 17 0.00057 23.8 0.8 12 145-156 2-13 (48)
130 1z60_A TFIIH basal transcripti 29.8 14 0.00049 24.7 0.6 23 136-158 16-42 (59)
131 3gj8_B Nuclear pore complex pr 29.3 11 0.00039 26.6 0.0 26 129-154 2-30 (92)
132 2elv_A Zinc finger protein 406 29.2 12 0.0004 19.8 0.1 21 146-166 9-29 (36)
133 1joc_A EEA1, early endosomal a 29.0 24 0.00083 26.2 1.8 25 135-159 69-98 (125)
134 2dkt_A Ring finger and CHY zin 28.9 26 0.0009 27.3 2.0 8 135-142 58-65 (143)
135 2jr6_A UPF0434 protein NMA0874 28.8 17 0.0006 24.7 0.9 22 135-156 8-36 (68)
136 2kr4_A Ubiquitin conjugation f 28.7 31 0.0011 23.3 2.2 28 131-158 10-38 (85)
137 1vq8_Z 50S ribosomal protein L 28.7 20 0.00067 25.4 1.1 9 146-154 27-35 (83)
138 1kbe_A Kinase suppressor of RA 28.7 22 0.00075 22.7 1.3 19 136-154 15-35 (49)
139 2hf1_A Tetraacyldisaccharide-1 28.1 17 0.00058 24.8 0.7 20 137-156 10-36 (68)
140 3ztg_A E3 ubiquitin-protein li 27.9 42 0.0014 22.3 2.7 26 133-158 11-38 (92)
141 2elq_A Zinc finger protein 406 27.7 13 0.00044 19.7 0.0 20 146-165 9-28 (36)
142 1ews_A RK-1 defensin, alpha-de 27.6 20 0.00068 21.3 0.8 14 137-150 15-29 (32)
143 1zbd_B Rabphilin-3A; G protein 27.5 29 0.00099 26.3 2.0 31 134-165 54-90 (134)
144 2fnf_X Putative RAS effector N 27.1 33 0.0011 23.1 2.1 24 131-154 31-57 (72)
145 1rfh_A RAS association (ralgds 27.0 34 0.0012 22.0 2.0 24 131-154 18-44 (59)
146 2yth_A Zinc finger protein 224 26.7 16 0.00054 20.6 0.3 21 146-166 12-32 (46)
147 1fv5_A First zinc finger of U- 26.5 9 0.00031 22.4 -0.8 26 146-171 8-33 (36)
148 2pk7_A Uncharacterized protein 26.5 21 0.00073 24.3 1.0 20 137-156 10-36 (69)
149 2ckl_B Ubiquitin ligase protei 26.2 22 0.00077 26.5 1.2 24 134-157 53-78 (165)
150 2elp_A Zinc finger protein 406 26.1 16 0.00056 19.4 0.3 20 146-165 9-29 (37)
151 2uzg_A Ubiquitin carboxyl-term 26.0 27 0.00092 24.9 1.5 26 134-159 24-53 (97)
152 2elo_A Zinc finger protein 406 25.7 11 0.00038 20.0 -0.5 20 146-165 9-28 (37)
153 2yw8_A RUN and FYVE domain-con 25.6 30 0.001 23.6 1.7 24 136-159 20-48 (82)
154 2e5r_A Dystrobrevin alpha; ZZ 25.6 38 0.0013 22.4 2.1 29 136-164 12-44 (63)
155 1f62_A Transcription factor WS 25.2 31 0.001 21.2 1.5 20 137-156 2-25 (51)
156 2emb_A Zinc finger protein 473 25.2 18 0.00061 20.1 0.3 21 146-166 12-32 (44)
157 2olm_A Nucleoporin-like protei 25.2 17 0.00058 27.9 0.3 35 132-167 22-57 (140)
158 2epv_A Zinc finger protein 268 25.2 15 0.00052 20.5 0.0 21 146-166 12-32 (44)
159 3iuf_A Zinc finger protein UBI 25.0 16 0.00055 21.3 0.1 21 146-166 7-27 (48)
160 3cxl_A N-chimerin; SH2, RHO-GA 25.0 32 0.0011 30.3 2.1 36 120-155 204-246 (463)
161 1njq_A Superman protein; zinc- 24.8 17 0.00057 19.7 0.1 21 146-166 6-26 (39)
162 3r24_B Non-structural protein 24.7 17 0.00059 28.7 0.2 15 136-150 118-132 (155)
163 3sr0_A Adenylate kinase; phosp 24.6 17 0.00058 28.6 0.2 25 131-155 120-146 (206)
164 3jyw_9 60S ribosomal protein L 24.6 55 0.0019 22.8 2.8 21 135-155 26-53 (72)
165 2el5_A Zinc finger protein 268 24.5 16 0.00055 20.0 0.0 21 146-166 10-30 (42)
166 2yt5_A Metal-response element- 24.4 35 0.0012 22.0 1.7 29 135-164 6-40 (66)
167 2fyg_A Replicase polyprotein 1 24.4 21 0.00072 27.5 0.7 15 136-150 111-125 (128)
168 2yu5_A Zinc finger protein 473 24.4 18 0.00063 20.0 0.3 21 146-166 12-32 (44)
169 2yur_A Retinoblastoma-binding 24.3 58 0.002 21.0 2.8 32 132-164 12-45 (74)
170 2enf_A Zinc finger protein 347 24.0 17 0.00058 20.4 0.1 21 146-166 12-32 (46)
171 2yte_A Zinc finger protein 473 23.9 17 0.00059 19.8 0.1 21 146-166 10-30 (42)
172 2ept_A Zinc finger protein 32; 23.9 19 0.00066 19.6 0.3 22 146-167 10-31 (41)
173 3izc_m 60S ribosomal protein R 23.9 31 0.001 25.2 1.4 22 135-156 36-64 (92)
174 2en2_A B-cell lymphoma 6 prote 23.8 18 0.00063 19.7 0.2 21 146-166 11-31 (42)
175 3t7l_A Zinc finger FYVE domain 23.8 36 0.0012 23.8 1.8 25 135-159 20-49 (90)
176 2eod_A TNF receptor-associated 23.5 26 0.0009 21.4 0.9 28 146-173 36-64 (66)
177 2eos_A B-cell lymphoma 6 prote 23.4 20 0.00069 19.6 0.3 21 146-166 11-31 (42)
178 2js4_A UPF0434 protein BB2007; 23.2 23 0.0008 24.2 0.7 22 135-156 8-36 (70)
179 2enh_A Zinc finger protein 28 23.0 23 0.00079 19.9 0.5 21 146-166 12-32 (46)
180 1xwh_A Autoimmune regulator; P 22.9 37 0.0013 22.2 1.6 29 134-163 7-36 (66)
181 1mm2_A MI2-beta; PHD, zinc fin 22.7 36 0.0012 22.1 1.5 23 134-156 8-31 (61)
182 3cc2_Z 50S ribosomal protein L 22.5 25 0.00086 26.7 0.8 22 135-156 60-88 (116)
183 2eon_A ZFP-95, zinc finger pro 22.3 21 0.00073 20.1 0.3 21 146-166 12-32 (46)
184 1ffk_W Ribosomal protein L37AE 22.3 27 0.00092 24.3 0.8 13 133-145 25-37 (73)
185 2yql_A PHD finger protein 21A; 22.2 37 0.0013 21.5 1.4 30 133-163 7-37 (56)
186 2en3_A ZFP-95, zinc finger pro 22.2 22 0.00075 19.9 0.3 20 146-165 12-31 (46)
187 2eoz_A Zinc finger protein 473 22.1 15 0.00052 20.7 -0.4 21 146-166 12-32 (46)
188 2jvx_A NF-kappa-B essential mo 22.1 18 0.0006 21.0 -0.1 24 144-167 1-24 (28)
189 2yts_A Zinc finger protein 484 22.1 22 0.00075 19.8 0.3 21 146-166 12-32 (46)
190 2eof_A Zinc finger protein 268 21.8 20 0.0007 19.7 0.1 21 146-166 12-32 (44)
191 2emg_A Zinc finger protein 484 21.8 20 0.00069 20.1 0.1 21 146-166 12-32 (46)
192 2han_A Protein ultraspiracle; 21.7 7.4 0.00025 28.0 -2.3 22 133-154 8-35 (93)
193 2ep1_A Zinc finger protein 484 21.7 18 0.00061 20.2 -0.2 21 146-166 12-32 (46)
194 4hn5_A Glucocorticoid receptor 21.6 7.4 0.00025 29.3 -2.4 22 133-154 27-54 (117)
195 1wjp_A Zinc finger protein 295 21.6 30 0.001 23.0 1.0 12 147-158 43-54 (107)
196 2em6_A Zinc finger protein 224 21.5 20 0.00069 20.1 0.1 21 146-166 12-32 (46)
197 2epc_A Zinc finger protein 32; 21.4 21 0.00071 19.4 0.1 21 146-166 11-31 (42)
198 1jjd_A Metallothionein, SMTA; 21.4 17 0.00059 24.1 -0.3 16 153-168 27-42 (55)
199 1wfk_A Zinc finger, FYVE domai 21.4 59 0.002 22.7 2.5 28 132-159 6-38 (88)
200 2eox_A Zinc finger protein 473 21.3 22 0.00076 19.7 0.2 21 146-166 12-32 (44)
201 2kre_A Ubiquitin conjugation f 21.3 34 0.0011 24.1 1.2 27 131-157 25-52 (100)
202 2yto_A Zinc finger protein 484 21.3 21 0.00072 20.1 0.1 20 146-165 12-31 (46)
203 2han_B Ecdysone receptor; tran 21.2 9.2 0.00031 28.6 -1.9 22 133-154 6-33 (119)
204 2f42_A STIP1 homology and U-bo 21.2 39 0.0013 26.8 1.7 27 131-157 102-129 (179)
205 2ytg_A ZFP-95, zinc finger pro 21.0 33 0.0011 19.1 1.0 21 146-166 12-32 (46)
206 3j21_i 50S ribosomal protein L 20.8 32 0.0011 24.6 1.0 11 145-155 34-44 (83)
207 1wii_A Hypothetical UPF0222 pr 20.5 44 0.0015 23.7 1.7 26 131-156 19-57 (85)
208 2eoy_A Zinc finger protein 473 20.4 25 0.00087 19.7 0.3 21 146-166 12-32 (46)
209 1twf_I B12.6, DNA-directed RNA 20.2 39 0.0013 25.0 1.4 22 135-156 4-36 (122)
210 3uk3_C Zinc finger protein 217 20.1 23 0.00078 20.6 0.1 12 147-158 33-44 (57)
211 2en7_A Zinc finger protein 268 20.0 21 0.00073 19.6 -0.1 21 146-166 12-32 (44)
212 2eq1_A Zinc finger protein 347 20.0 21 0.00072 20.0 -0.1 21 146-166 12-32 (46)
213 2l43_A N-teminal domain from h 20.0 79 0.0027 22.0 3.0 32 132-164 22-59 (88)
No 1
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=2e-13 Score=93.36 Aligned_cols=42 Identities=26% Similarity=0.661 Sum_probs=37.3
Q ss_pred CCCCcccceecCCCCceecCCCCCccccccccccccccccccc
Q psy2284 131 KFPNRHFCAVCGFPSNYTCVPCGARYCCVRCLGTHQDTRCLKW 173 (175)
Q Consensus 131 ~~P~r~~C~VCG~~~~YtC~~Cg~ryCS~~C~~~H~etRC~K~ 173 (175)
......+|.||+.+++|+||+|+.+|||+.|++.|+++ |.+-
T Consensus 8 ~~~~~~~C~vC~~~~kY~CPrC~~~yCSl~C~k~Hk~~-C~~~ 49 (56)
T 2yqq_A 8 LKCSTVVCVICLEKPKYRCPACRVPYCSVVCFRKHKEQ-CNPE 49 (56)
T ss_dssp CCCCCCCCTTTCSCCSEECTTTCCEESSHHHHHHHHHH-CCCC
T ss_pred cCCCCCccCcCcCCCeeeCCCCCCCeeCHHHHHHHHhh-CcCC
Confidence 34455699999999999999999999999999999998 9763
No 2
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=99.33 E-value=1.7e-13 Score=94.61 Aligned_cols=42 Identities=38% Similarity=0.872 Sum_probs=37.8
Q ss_pred CCCCCCCcccceecC----CCCceecCCCCCccccccccccccccccc
Q psy2284 128 KPSKFPNRHFCAVCG----FPSNYTCVPCGARYCCVRCLGTHQDTRCL 171 (175)
Q Consensus 128 ~ps~~P~r~~C~VCG----~~~~YtC~~Cg~ryCS~~C~~~H~etRC~ 171 (175)
.++..+++.+|.||+ ++++|+||+|+++|||+.|++.|++ |.
T Consensus 4 ~~s~m~~~~~C~vC~~~~~~~akY~CPrC~~rYCSl~C~k~Hk~--Cs 49 (59)
T 1x4s_A 4 GSSGMEPAGPCGFCPAGEVQPARYTCPRCNAPYCSLRCYRTHGT--CA 49 (59)
T ss_dssp CCSSCCCCEEECSSCTTCCEEECEECTTTCCEESSHHHHHHHCC--GG
T ss_pred CCCCCCCCCcCcCCCCCcCCCccccCcCCCCCccChHHHHHHhH--hC
Confidence 567788899999998 6899999999999999999999984 65
No 3
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=96.16 E-value=0.0022 Score=42.71 Aligned_cols=37 Identities=27% Similarity=0.588 Sum_probs=30.8
Q ss_pred CCCCcccceecCCCCceecCCCCC-ccccccccccccc
Q psy2284 131 KFPNRHFCAVCGFPSNYTCVPCGA-RYCCVRCLGTHQD 167 (175)
Q Consensus 131 ~~P~r~~C~VCG~~~~YtC~~Cg~-ryCS~~C~~~H~e 167 (175)
..+....|.+||.++...|.+|.. .|||..|...|..
T Consensus 11 ~~~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~~W~ 48 (60)
T 2dj8_A 11 QEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWE 48 (60)
T ss_dssp CCCCSCCCSSSCSCCCEECTTTSCCEESSHHHHHHTHH
T ss_pred CCCCCcccccCCCCCcccCCCCCCEeeeCHHHHHHHHH
Confidence 345567999999999999999965 7999999887654
No 4
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=95.76 E-value=0.0022 Score=42.95 Aligned_cols=34 Identities=29% Similarity=0.670 Sum_probs=28.7
Q ss_pred CcccceecCCCCceecCCCCC-ccccccccccccc
Q psy2284 134 NRHFCAVCGFPSNYTCVPCGA-RYCCVRCLGTHQD 167 (175)
Q Consensus 134 ~r~~C~VCG~~~~YtC~~Cg~-ryCS~~C~~~H~e 167 (175)
....|.+||.++...|.+|.. .|||..|...|..
T Consensus 16 ~~~~C~~C~~~~~~~Cs~C~~~~YCs~~CQ~~~W~ 50 (64)
T 2odd_A 16 SSESCWNCGRKASETCSGCNTARYCGSFCQHKDWE 50 (64)
T ss_dssp CSSSCTTTSSCCCEEETTTSCCEESSHHHHHHHHH
T ss_pred CCCcCccccCCCcccCCCCCChhhCCHHHHHHHHH
Confidence 456899999999999999954 7999999877653
No 5
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=95.43 E-value=0.0038 Score=41.62 Aligned_cols=34 Identities=32% Similarity=0.687 Sum_probs=28.2
Q ss_pred CcccceecCCCCceecCCCC-Cccccccccccccc
Q psy2284 134 NRHFCAVCGFPSNYTCVPCG-ARYCCVRCLGTHQD 167 (175)
Q Consensus 134 ~r~~C~VCG~~~~YtC~~Cg-~ryCS~~C~~~H~e 167 (175)
....|.+||.++...|.+|. ..|||..|...|..
T Consensus 12 ~~~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~dW~ 46 (60)
T 2od1_A 12 SSESCWNCGRKASETCSGCNTARYCGSFCQHKDWE 46 (60)
T ss_dssp CSSCCTTTSSCCCEECTTTSCCEESSHHHHHHHHH
T ss_pred CCCccccCCCcccccCCCCCCeeecCHHHHHHHHH
Confidence 34689999999999999996 57999999766543
No 6
>2yqp_A Probable ATP-dependent RNA helicase DDX59; structure genomics, ZF-HIT domain, DEAD box polypeptide 59 isoform 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.37 E-value=0.0045 Score=42.54 Aligned_cols=35 Identities=29% Similarity=0.706 Sum_probs=30.0
Q ss_pred CCCcccceecCCCCceecCCCCCcccccccccccc
Q psy2284 132 FPNRHFCAVCGFPSNYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 132 ~P~r~~C~VCG~~~~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.-.+|-|||..|.|-|-.=....||+.|-..|-
T Consensus 16 ~pgePvCvvCGryGeYICd~Td~DVCSlECK~~~l 50 (60)
T 2yqp_A 16 EPGEPICVVCGRYGEYICDKTDEDVCSLECKAKHL 50 (60)
T ss_dssp CTTSCCCSSSSSCCSEECSSSCCEESSHHHHHHHH
T ss_pred CCCCceEEEecCccceeecCCCcchhhHHHHHHHH
Confidence 34455699999999999999999999999987664
No 7
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=95.22 E-value=0.0044 Score=39.65 Aligned_cols=33 Identities=24% Similarity=0.635 Sum_probs=27.5
Q ss_pred cccceecCCCCceecCCCCC-ccccccccccccc
Q psy2284 135 RHFCAVCGFPSNYTCVPCGA-RYCCVRCLGTHQD 167 (175)
Q Consensus 135 r~~C~VCG~~~~YtC~~Cg~-ryCS~~C~~~H~e 167 (175)
...|.+||.++...|.+|.. .|||..|...|..
T Consensus 9 ~~~C~~C~~~~~~~C~~C~~~~YCs~~CQ~~~W~ 42 (52)
T 2jw6_A 9 EQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWK 42 (52)
T ss_dssp --CCSSSSSSCSEECTTTCSSEESSHHHHHHHTT
T ss_pred CCcCCCCCCCCcCcCCCCCCEeecCHHHHHHHHH
Confidence 45899999999999999965 7999999987665
No 8
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=95.21 E-value=0.0069 Score=41.89 Aligned_cols=36 Identities=33% Similarity=0.820 Sum_probs=30.3
Q ss_pred CCCcccceecCCCCceecCCCC-Cccccccccccccc
Q psy2284 132 FPNRHFCAVCGFPSNYTCVPCG-ARYCCVRCLGTHQD 167 (175)
Q Consensus 132 ~P~r~~C~VCG~~~~YtC~~Cg-~ryCS~~C~~~H~e 167 (175)
.+...+|.+||.++...|.+|. .+|||..|...|..
T Consensus 12 ~~~~~~C~~C~~~~~~~Cs~Ck~v~YCs~eCQ~~~W~ 48 (70)
T 2d8q_A 12 APERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWE 48 (70)
T ss_dssp CCCCCBCSSSCCBCCCBCTTTSCCBCSCHHHHHHTHH
T ss_pred cCCCCcCCCCCCcccccCCCCCCEeeCCHHHhHHHHH
Confidence 3445699999999999999996 46999999988765
No 9
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=89.62 E-value=0.19 Score=31.85 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=28.1
Q ss_pred cccceecCC--------------CCceecCCCCCccccccccccccccc
Q psy2284 135 RHFCAVCGF--------------PSNYTCVPCGARYCCVRCLGTHQDTR 169 (175)
Q Consensus 135 r~~C~VCG~--------------~~~YtC~~Cg~ryCS~~C~~~H~etR 169 (175)
...|.+||. ...|.|..||..|-...-...|++||
T Consensus 14 ~~~C~~C~k~F~~~~~l~~~H~~~k~~~C~~C~k~f~~~~~~~~~~~tr 62 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDAR 62 (62)
T ss_dssp EEECSSSCCEEEHHHHHHHEETTTTEEBCSSSCCBCEECTTCSCCCCCC
T ss_pred CccCCCCCchhccHHHhHhhcCCCCCEECCCCCCccccCccccccccCC
Confidence 367999995 35799999999988887777777776
No 10
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=89.18 E-value=0.26 Score=34.10 Aligned_cols=31 Identities=19% Similarity=0.646 Sum_probs=23.5
Q ss_pred CCCCCCCcccceecCC-CC--ceecCCCCCccccc
Q psy2284 128 KPSKFPNRHFCAVCGF-PS--NYTCVPCGARYCCV 159 (175)
Q Consensus 128 ~ps~~P~r~~C~VCG~-~~--~YtC~~Cg~ryCS~ 159 (175)
|.+..+...-|+.|+. ++ .|.| +||.-||+.
T Consensus 8 ~~~~~~~~~rC~~C~kkvgl~~f~C-rCg~~FC~~ 41 (64)
T 1wg2_A 8 PSRPVRPNNRCFSCNKKVGVMGFKC-KCGSTFCGS 41 (64)
T ss_dssp SSCCSCCSCSCTTTCCCCTTSCEEC-TTSCEECSS
T ss_pred CCCCCCcCCcChhhCCcccccCeEe-ecCCEeccc
Confidence 4444555678999994 45 5899 999999985
No 11
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=88.26 E-value=0.12 Score=45.84 Aligned_cols=33 Identities=27% Similarity=0.592 Sum_probs=27.0
Q ss_pred CCcccceecCC--CCceecCCCCC-ccccccccccc
Q psy2284 133 PNRHFCAVCGF--PSNYTCVPCGA-RYCCVRCLGTH 165 (175)
Q Consensus 133 P~r~~C~VCG~--~~~YtC~~Cg~-ryCS~~C~~~H 165 (175)
.....|..|+. .+.+.|.+|+. +|||..|...|
T Consensus 47 ~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~ 82 (433)
T 3qww_A 47 ERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKED 82 (433)
T ss_dssp GTTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHH
T ss_pred ccCCcCCcccccCCCCCCCCCCcceeecChhhhhhh
Confidence 34578999994 56788999987 99999998654
No 12
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.94 E-value=0.34 Score=33.81 Aligned_cols=25 Identities=28% Similarity=0.697 Sum_probs=20.4
Q ss_pred CcccceecC-CCCc-----eecCCCCCccccc
Q psy2284 134 NRHFCAVCG-FPSN-----YTCVPCGARYCCV 159 (175)
Q Consensus 134 ~r~~C~VCG-~~~~-----YtC~~Cg~ryCS~ 159 (175)
...-|.+|+ .++- |.| +||.-||+.
T Consensus 14 ~~~rC~~C~kk~gL~~~egf~C-rCg~~FC~~ 44 (67)
T 1x4w_A 14 SRRRCFQCQTKLELVQQELGSC-RCGYVFCML 44 (67)
T ss_dssp CTTBCSSSCCBCCHHHHHHHCC-SSSCCCCTT
T ss_pred cCCcchhhCCeecccccCceEe-cCCCEehhc
Confidence 345899999 6663 789 999999986
No 13
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=86.71 E-value=0.17 Score=44.35 Aligned_cols=32 Identities=22% Similarity=0.686 Sum_probs=26.3
Q ss_pred CcccceecCC--CCceecCCCCC-ccccccccccc
Q psy2284 134 NRHFCAVCGF--PSNYTCVPCGA-RYCCVRCLGTH 165 (175)
Q Consensus 134 ~r~~C~VCG~--~~~YtC~~Cg~-ryCS~~C~~~H 165 (175)
....|..|+. .+...|.+|+. +|||..|.+.|
T Consensus 46 ~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~ 80 (429)
T 3qwp_A 46 RGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKA 80 (429)
T ss_dssp BTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHT
T ss_pred CCCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhh
Confidence 3457999994 56788999987 99999998754
No 14
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=86.03 E-value=0.31 Score=32.47 Aligned_cols=10 Identities=30% Similarity=1.029 Sum_probs=7.7
Q ss_pred ceecCCCCCc
Q psy2284 146 NYTCVPCGAR 155 (175)
Q Consensus 146 ~YtC~~Cg~r 155 (175)
.++||.||..
T Consensus 36 dw~CP~Cg~~ 45 (54)
T 4rxn_A 36 DWVCPLCGVG 45 (54)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCcCCCCc
Confidence 5689999874
No 15
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=85.58 E-value=0.55 Score=32.50 Aligned_cols=27 Identities=26% Similarity=0.769 Sum_probs=21.2
Q ss_pred CCCcccceecCC-CC--ceecCCCCCccccc
Q psy2284 132 FPNRHFCAVCGF-PS--NYTCVPCGARYCCV 159 (175)
Q Consensus 132 ~P~r~~C~VCG~-~~--~YtC~~Cg~ryCS~ 159 (175)
.+...-|+.|+. ++ .|.| +||.-||+.
T Consensus 12 k~~~~rC~~C~kkvgl~~f~C-rCg~~FC~~ 41 (64)
T 1wfh_A 12 PQRPNRCTVCRKRVGLTGFMC-RCGTTFCGS 41 (64)
T ss_dssp CSSCCCCTTTCCCCCTTCEEC-SSSCEECTT
T ss_pred CCcCCcChhhCCccCccCEEe-ecCCEeccc
Confidence 444567999994 45 5899 899999986
No 16
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=84.54 E-value=0.64 Score=33.01 Aligned_cols=27 Identities=22% Similarity=0.738 Sum_probs=21.4
Q ss_pred CCCcccceecC-CCC--ceecCCCCCccccc
Q psy2284 132 FPNRHFCAVCG-FPS--NYTCVPCGARYCCV 159 (175)
Q Consensus 132 ~P~r~~C~VCG-~~~--~YtC~~Cg~ryCS~ 159 (175)
.....-|..|+ .++ .|.| +||.-||+.
T Consensus 22 k~~~~RC~~C~kkvgL~~f~C-rCg~~FCs~ 51 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVTGFKC-RCGSTFCGT 51 (74)
T ss_dssp TCCCCBCSSSCCBCTTTCEEC-TTSCEECTT
T ss_pred cccCccchhhcCcccccceEe-ccCCEeccc
Confidence 45556899998 434 6999 899999986
No 17
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=83.88 E-value=0.26 Score=44.30 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=26.5
Q ss_pred CCcccceecC--CCCceecCCCCC-ccccccccccc
Q psy2284 133 PNRHFCAVCG--FPSNYTCVPCGA-RYCCVRCLGTH 165 (175)
Q Consensus 133 P~r~~C~VCG--~~~~YtC~~Cg~-ryCS~~C~~~H 165 (175)
....+|..|+ ..+...|.+|+. .|||..|...|
T Consensus 47 ~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~ 82 (490)
T 3n71_A 47 LINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDA 82 (490)
T ss_dssp GTTTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHH
T ss_pred ccCCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhh
Confidence 3467999997 456788999987 69999998654
No 18
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=83.80 E-value=0.36 Score=31.16 Aligned_cols=21 Identities=33% Similarity=1.108 Sum_probs=15.3
Q ss_pred cccceecCC--C-------------CceecCCCCCc
Q psy2284 135 RHFCAVCGF--P-------------SNYTCVPCGAR 155 (175)
Q Consensus 135 r~~C~VCG~--~-------------~~YtC~~Cg~r 155 (175)
...|.|||| . ..+.||.||..
T Consensus 4 ~y~C~vCGyvyd~~~Gd~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 4 KYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CEEETTTCCEECGGGGTTCCGGGSCTTCBCTTTCCB
T ss_pred EEECCCCCeEEeCCcCCCcchhhCCCCCcCcCCCCc
Confidence 457999994 2 14689999874
No 19
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=81.02 E-value=1.1 Score=29.06 Aligned_cols=36 Identities=19% Similarity=0.460 Sum_probs=24.2
Q ss_pred CCccccccCCCCCCCcccceecCC-------CCceecCCCCCcc
Q psy2284 120 SAYENAEAKPSKFPNRHFCAVCGF-------PSNYTCVPCGARY 156 (175)
Q Consensus 120 p~Y~~a~a~ps~~P~r~~C~VCG~-------~~~YtC~~Cg~ry 156 (175)
..|.... ..-....++||..||. ...+.|++||.-|
T Consensus 5 l~~y~v~-~~kv~~~~k~CP~CG~~~fm~~~~~R~~C~kCG~t~ 47 (50)
T 3j20_Y 5 WKLYEIK-DGKVIRKNKFCPRCGPGVFMADHGDRWACGKCGYTE 47 (50)
T ss_dssp CCCCEEC-SSCEECSSEECSSSCSSCEEEECSSEEECSSSCCEE
T ss_pred eeEEEEE-CCEEEEecccCCCCCCceEEecCCCeEECCCCCCEE
Confidence 3455554 2334578999999995 2377899998643
No 20
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=80.33 E-value=0.75 Score=30.16 Aligned_cols=9 Identities=44% Similarity=1.305 Sum_probs=6.3
Q ss_pred ceecCCCCC
Q psy2284 146 NYTCVPCGA 154 (175)
Q Consensus 146 ~YtC~~Cg~ 154 (175)
.+.||-||.
T Consensus 36 dw~CP~Cg~ 44 (52)
T 1e8j_A 36 DWACPVCGA 44 (52)
T ss_dssp TCCCSSSCC
T ss_pred CCcCCCCCC
Confidence 347888876
No 21
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=78.86 E-value=1.8 Score=30.66 Aligned_cols=31 Identities=23% Similarity=0.705 Sum_probs=23.5
Q ss_pred CCCCCCCcccceecCC-CC--ceecCCCCCccccc
Q psy2284 128 KPSKFPNRHFCAVCGF-PS--NYTCVPCGARYCCV 159 (175)
Q Consensus 128 ~ps~~P~r~~C~VCG~-~~--~YtC~~Cg~ryCS~ 159 (175)
+....+...-|..|+. ++ .+.|. ||.-||+.
T Consensus 18 ~~~~k~~~nRC~~CrKkvgL~gf~Cr-Cg~~FCs~ 51 (74)
T 1wfl_A 18 PELPKPKKNRCFMCRKKVGLTGFDCR-CGNLFCGL 51 (74)
T ss_dssp CCCCCSCTTBCSSSCCBCGGGCEECT-TSCEECSS
T ss_pred cccCCCcCCcChhhCCcccccCeecC-CCCEechh
Confidence 4444556678999994 34 58899 99999986
No 22
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=78.50 E-value=0.56 Score=35.94 Aligned_cols=14 Identities=14% Similarity=0.389 Sum_probs=11.3
Q ss_pred CCCCcccceecCCC
Q psy2284 131 KFPNRHFCAVCGFP 144 (175)
Q Consensus 131 ~~P~r~~C~VCG~~ 144 (175)
..|.+..|..|||.
T Consensus 66 ~~p~~~~C~~CG~~ 79 (139)
T 3a43_A 66 EEEAVFKCRNCNYE 79 (139)
T ss_dssp EECCEEEETTTCCE
T ss_pred ecCCcEECCCCCCE
Confidence 35788999999954
No 23
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=77.68 E-value=1.4 Score=32.02 Aligned_cols=26 Identities=27% Similarity=0.927 Sum_probs=20.4
Q ss_pred CCcccceecC-CCC---ceecCCCCCccccc
Q psy2284 133 PNRHFCAVCG-FPS---NYTCVPCGARYCCV 159 (175)
Q Consensus 133 P~r~~C~VCG-~~~---~YtC~~Cg~ryCS~ 159 (175)
....-|.+|+ .++ .|.| +||.-||+.
T Consensus 23 ~~~~rC~~C~kkvgl~~~f~C-rCg~~FC~~ 52 (85)
T 1wff_A 23 KIMKHCFLCGKKTGLATSFEC-RCGNNFCAS 52 (85)
T ss_dssp CCCCBCSSSCCBCSSSSCEEC-TTCCEECTT
T ss_pred ccCccchhhCCeecccCCeEc-CCCCEeccc
Confidence 3346899999 444 6899 699999985
No 24
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=76.81 E-value=0.91 Score=35.87 Aligned_cols=24 Identities=29% Similarity=0.815 Sum_probs=17.8
Q ss_pred CCCcccceecCCC--C--ceecCCCCCc
Q psy2284 132 FPNRHFCAVCGFP--S--NYTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG~~--~--~YtC~~Cg~r 155 (175)
.+....|.||||. + .-.||.||.+
T Consensus 135 ~~~~~~C~~CG~i~~~~~p~~CP~Cg~~ 162 (170)
T 3pwf_A 135 IKKVYICPICGYTAVDEAPEYCPVCGAP 162 (170)
T ss_dssp CSCEEECTTTCCEEESCCCSBCTTTCCB
T ss_pred CCCeeEeCCCCCeeCCCCCCCCCCCCCC
Confidence 3577889999963 2 3489999964
No 25
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=73.33 E-value=1.1 Score=29.30 Aligned_cols=10 Identities=40% Similarity=1.109 Sum_probs=6.6
Q ss_pred ceecCCCCCc
Q psy2284 146 NYTCVPCGAR 155 (175)
Q Consensus 146 ~YtC~~Cg~r 155 (175)
.+.||-||..
T Consensus 35 dw~CP~Cg~~ 44 (52)
T 1yk4_A 35 DWVCPLCGAP 44 (52)
T ss_dssp TCBCTTTCCB
T ss_pred CCcCCCCCCC
Confidence 3478888763
No 26
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=72.94 E-value=0.67 Score=32.38 Aligned_cols=32 Identities=19% Similarity=0.353 Sum_probs=20.5
Q ss_pred CCcccceecCCCCceecCCCCCcccccccccc
Q psy2284 133 PNRHFCAVCGFPSNYTCVPCGARYCCVRCLGT 164 (175)
Q Consensus 133 P~r~~C~VCG~~~~YtC~~Cg~ryCS~~C~~~ 164 (175)
++.+.|-|||.+..+.=..=..+|||.+|..+
T Consensus 7 ~~~~~CP~Cgkp~~W~~~~~~rPFCSeRCr~i 38 (68)
T 1lv3_A 7 TITVNCPTCGKTVVWGEISPFRPFCSKRCQLI 38 (68)
T ss_dssp CCEEECTTTCCEEECSSSSSCCSSSSHHHHHH
T ss_pred CCcCcCCCCCCcccccccCCCCcccCHHHHhh
Confidence 35567888885543321123568999999765
No 27
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=72.25 E-value=2.2 Score=36.51 Aligned_cols=31 Identities=32% Similarity=0.785 Sum_probs=23.9
Q ss_pred CCCcccceecC--CCC----ceecCCCCCccccccccc
Q psy2284 132 FPNRHFCAVCG--FPS----NYTCVPCGARYCCVRCLG 163 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~----~YtC~~Cg~ryCS~~C~~ 163 (175)
+....+|.+|| +|| .|.|..||.-+|. .|..
T Consensus 354 ~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~-~C~~ 390 (406)
T 2vrw_B 354 FEETTSCKACQMLLRGTFYQGYRCYRCRAPAHK-ECLG 390 (406)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECG-GGGG
T ss_pred CCCCCCCccccchhceeCCCCCCCCCCcCccch-hhhh
Confidence 45668999999 665 6889999998765 4543
No 28
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=72.10 E-value=0.87 Score=32.69 Aligned_cols=23 Identities=35% Similarity=0.908 Sum_probs=17.1
Q ss_pred CCcccceecCC--CC--------------------ceecCCCCCc
Q psy2284 133 PNRHFCAVCGF--PS--------------------NYTCVPCGAR 155 (175)
Q Consensus 133 P~r~~C~VCG~--~~--------------------~YtC~~Cg~r 155 (175)
.....|.|||| .+ .+.||-||..
T Consensus 25 m~~y~C~vCGyvYD~~~Gdp~~gI~pGT~fedlPddW~CPvCga~ 69 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAA 69 (81)
T ss_dssp CCEEEETTTCCEEETTTCBTTTTBCTTCCTTTSCTTCCCTTTCCC
T ss_pred cceEEeCCCCEEEcCCcCCcccCcCCCCChhHCCCCCcCCCCCCC
Confidence 45789999994 32 4589999873
No 29
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=71.65 E-value=0.91 Score=30.97 Aligned_cols=24 Identities=29% Similarity=0.706 Sum_probs=18.5
Q ss_pred cccceecC-CCCceecCCCCCcccc
Q psy2284 135 RHFCAVCG-FPSNYTCVPCGARYCC 158 (175)
Q Consensus 135 r~~C~VCG-~~~~YtC~~Cg~ryCS 158 (175)
.+.|..|| |-=+-.||.||....+
T Consensus 5 mr~C~~Cg~YTLk~~CP~CG~~t~~ 29 (60)
T 2aus_D 5 IRKCPKCGRYTLKETCPVCGEKTKV 29 (60)
T ss_dssp CEECTTTCCEESSSBCTTTCSBCEE
T ss_pred ceECCCCCCEEccccCcCCCCccCC
Confidence 45788888 6667779999987655
No 30
>1h7b_A Anaerobic ribonucleotide-triphosphate reductase large chain; oxidoreductase, allosteric regulation, substrate specificity; 2.45A {Bacteriophage T4} SCOP: c.7.1.3 PDB: 1h79_A* 1h7a_A* 1h78_A 1hk8_A*
Probab=70.04 E-value=0.96 Score=42.46 Aligned_cols=24 Identities=25% Similarity=0.624 Sum_probs=5.5
Q ss_pred CCCcccceecCCCCc-------eecCCCCCc
Q psy2284 132 FPNRHFCAVCGFPSN-------YTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG~~~~-------YtC~~Cg~r 155 (175)
.|+...|.+|||.+. ..||.||..
T Consensus 537 n~~~~~C~~CGy~~~~~~~~~~~~CP~Cg~~ 567 (605)
T 1h7b_A 537 NMPVDKCFTCGSTHEMTPTENGFVCSICGET 567 (605)
T ss_dssp ECCEEET------------------------
T ss_pred CCCCccCcccCCcCccCccccCCcCCCCCCC
Confidence 477789999999883 569999963
No 31
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=69.65 E-value=1.2 Score=30.24 Aligned_cols=24 Identities=25% Similarity=0.713 Sum_probs=18.4
Q ss_pred cccceecC-CCCceecCCCCCcccc
Q psy2284 135 RHFCAVCG-FPSNYTCVPCGARYCC 158 (175)
Q Consensus 135 r~~C~VCG-~~~~YtC~~Cg~ryCS 158 (175)
.+.|..|| |--+-.||.||..+-+
T Consensus 6 mr~C~~CgvYTLk~~CP~CG~~T~~ 30 (60)
T 2apo_B 6 MKKCPKCGLYTLKEICPKCGEKTVI 30 (60)
T ss_dssp CEECTTTCCEESSSBCSSSCSBCBC
T ss_pred ceeCCCCCCEeccccCcCCCCcCCC
Confidence 46788888 6667779999987544
No 32
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=67.45 E-value=3 Score=29.12 Aligned_cols=28 Identities=25% Similarity=0.780 Sum_probs=23.6
Q ss_pred CCCcccceecCCCCceecCCC-CCccccc
Q psy2284 132 FPNRHFCAVCGFPSNYTCVPC-GARYCCV 159 (175)
Q Consensus 132 ~P~r~~C~VCG~~~~YtC~~C-g~ryCS~ 159 (175)
-.....|.||.--+.++|..| |.-||..
T Consensus 5 ~ee~pWC~ICneDAtlrC~gCdgDLYC~r 33 (67)
T 2d8v_A 5 SSGLPWCCICNEDATLRCAGCDGDLYCAR 33 (67)
T ss_dssp CCCCSSCTTTCSCCCEEETTTTSEEECSS
T ss_pred CcCCCeeEEeCCCCeEEecCCCCceehHH
Confidence 345568999999999999999 8888863
No 33
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=66.72 E-value=1.8 Score=29.93 Aligned_cols=10 Identities=30% Similarity=1.059 Sum_probs=7.4
Q ss_pred CcccceecCC
Q psy2284 134 NRHFCAVCGF 143 (175)
Q Consensus 134 ~r~~C~VCG~ 143 (175)
....|.||||
T Consensus 6 ~~y~C~vCGy 15 (70)
T 1dx8_A 6 GKYECEACGY 15 (70)
T ss_dssp SCEEETTTCC
T ss_pred ceEEeCCCCE
Confidence 4578889983
No 34
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=66.53 E-value=1.3 Score=29.38 Aligned_cols=10 Identities=30% Similarity=1.082 Sum_probs=6.6
Q ss_pred ceecCCCCCc
Q psy2284 146 NYTCVPCGAR 155 (175)
Q Consensus 146 ~YtC~~Cg~r 155 (175)
.+.||-||..
T Consensus 36 dw~CP~Cga~ 45 (55)
T 2v3b_B 36 DWVCPDCGVG 45 (55)
T ss_dssp TCCCTTTCCC
T ss_pred CCcCCCCCCC
Confidence 3478888763
No 35
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=63.68 E-value=6 Score=25.99 Aligned_cols=25 Identities=36% Similarity=0.983 Sum_probs=18.8
Q ss_pred CCCcccceecC---C----CCceecCCCCCcc
Q psy2284 132 FPNRHFCAVCG---F----PSNYTCVPCGARY 156 (175)
Q Consensus 132 ~P~r~~C~VCG---~----~~~YtC~~Cg~ry 156 (175)
...+.||.-|| + ...+.|.+||.-+
T Consensus 15 ~~~~~fCPkCG~~~~ma~~~dr~~C~kCgyt~ 46 (55)
T 2k4x_A 15 VRKHRFCPRCGPGVFLAEHADRYSCGRCGYTE 46 (55)
T ss_dssp CCSSCCCTTTTTTCCCEECSSEEECTTTCCCE
T ss_pred EEccccCcCCCCceeEeccCCEEECCCCCCEE
Confidence 34588999999 3 3478899998754
No 36
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=63.66 E-value=1.9 Score=34.82 Aligned_cols=23 Identities=26% Similarity=0.681 Sum_probs=17.4
Q ss_pred CCcccceecCCC--C--ceecCCCCCc
Q psy2284 133 PNRHFCAVCGFP--S--NYTCVPCGAR 155 (175)
Q Consensus 133 P~r~~C~VCG~~--~--~YtC~~Cg~r 155 (175)
.....|.||||. | ...||-||..
T Consensus 169 ~~~~~C~~CG~i~~g~~p~~CP~C~~~ 195 (202)
T 1yuz_A 169 DKFHLCPICGYIHKGEDFEKCPICFRP 195 (202)
T ss_dssp CCEEECSSSCCEEESSCCSBCTTTCCB
T ss_pred CcEEEECCCCCEEcCcCCCCCCCCCCC
Confidence 467899999953 3 3589999874
No 37
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=63.24 E-value=2.8 Score=30.91 Aligned_cols=12 Identities=33% Similarity=0.908 Sum_probs=8.0
Q ss_pred CceecCCCCCcc
Q psy2284 145 SNYTCVPCGARY 156 (175)
Q Consensus 145 ~~YtC~~Cg~ry 156 (175)
++-.||+|++||
T Consensus 57 G~q~CpqCktrY 68 (93)
T 1weo_A 57 GTQNCPQCKTRY 68 (93)
T ss_dssp SCSSCTTTCCCC
T ss_pred cCccccccCCcc
Confidence 455677777777
No 38
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=62.89 E-value=2.7 Score=30.83 Aligned_cols=25 Identities=20% Similarity=0.499 Sum_probs=19.5
Q ss_pred CCCCcccceecCCC-----Cce-ecCCCCCc
Q psy2284 131 KFPNRHFCAVCGFP-----SNY-TCVPCGAR 155 (175)
Q Consensus 131 ~~P~r~~C~VCG~~-----~~Y-tC~~Cg~r 155 (175)
..|....|..||+. ..+ .||.||..
T Consensus 69 ~~p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKPNALDYGVCEKCHSK 99 (119)
T ss_dssp EECCEEECSSSSCEECSCCSTTCCCSSSSSC
T ss_pred eccceEEcCCCCCEEeCCCCCCCcCccccCC
Confidence 35788999999943 256 89999976
No 39
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=62.85 E-value=2 Score=34.21 Aligned_cols=23 Identities=22% Similarity=0.658 Sum_probs=16.8
Q ss_pred CCcccceecCCC--C---ceecCCCCCc
Q psy2284 133 PNRHFCAVCGFP--S---NYTCVPCGAR 155 (175)
Q Consensus 133 P~r~~C~VCG~~--~---~YtC~~Cg~r 155 (175)
.....|.||||. | .-.||.||..
T Consensus 153 ~~~~~C~~CG~~~~g~~~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHEGTGAPELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEEEEECCSBCTTTCCB
T ss_pred CceEEECCCCCEeeCCCCCCCCCCCcCC
Confidence 347899999954 3 1279999975
No 40
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=62.50 E-value=1.7 Score=31.57 Aligned_cols=10 Identities=30% Similarity=0.853 Sum_probs=8.3
Q ss_pred CCcccceecC
Q psy2284 133 PNRHFCAVCG 142 (175)
Q Consensus 133 P~r~~C~VCG 142 (175)
.....|.|||
T Consensus 33 m~~y~C~vCG 42 (87)
T 1s24_A 33 YLKWICITCG 42 (87)
T ss_dssp CCEEEETTTT
T ss_pred CceEECCCCC
Confidence 4578999999
No 41
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=62.50 E-value=2.8 Score=29.04 Aligned_cols=24 Identities=29% Similarity=0.650 Sum_probs=17.2
Q ss_pred CCCcccceecCCC------CceecCCCCCc
Q psy2284 132 FPNRHFCAVCGFP------SNYTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG~~------~~YtC~~Cg~r 155 (175)
.+-...|.-||.. ....|+.||.|
T Consensus 25 ~~v~Y~C~~CG~~~e~~~~d~irCp~CG~R 54 (70)
T 1twf_L 25 ATLKYICAECSSKLSLSRTDAVRCKDCGHR 54 (70)
T ss_dssp CCCCEECSSSCCEECCCTTSTTCCSSSCCC
T ss_pred ceEEEECCCCCCcceeCCCCCccCCCCCce
Confidence 5667789999933 24569999875
No 42
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=61.09 E-value=3 Score=30.87 Aligned_cols=27 Identities=22% Similarity=0.444 Sum_probs=23.7
Q ss_pred CCCcccceecCCCCceecCCCCCcccc
Q psy2284 132 FPNRHFCAVCGFPSNYTCVPCGARYCC 158 (175)
Q Consensus 132 ~P~r~~C~VCG~~~~YtC~~Cg~ryCS 158 (175)
+=+...|.+||..+.+.|..|-.-||.
T Consensus 55 ~Cp~c~C~~C~k~~~~~C~~Cp~sfC~ 81 (107)
T 4gne_A 55 ECPWHQCDECSSAAVSFCEFCPHSFCK 81 (107)
T ss_dssp CCGGGBCTTTCSBCCEECSSSSCEECT
T ss_pred ECCCCCCCcCCCCCCcCcCCCCcchhh
Confidence 466778999999999999999999875
No 43
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=60.79 E-value=2.2 Score=27.78 Aligned_cols=30 Identities=20% Similarity=0.437 Sum_probs=17.0
Q ss_pred ccceecCCCCceecCCCCCccccccccccc
Q psy2284 136 HFCAVCGFPSNYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 136 ~~C~VCG~~~~YtC~~Cg~ryCS~~C~~~H 165 (175)
..|..||....-.=.+=..+|||..|-+.+
T Consensus 19 ~~C~~CG~~i~~~~~~r~krFCS~sCR~~y 48 (49)
T 2l8e_A 19 LKCEYCGKYAPAEQFRGSKRFCSMTCAKRY 48 (49)
T ss_dssp EECTTTCCEEEGGGCTTTSSSCSHHHHHHH
T ss_pred CcChhccCccccccCCCCCccCCHHHHhhh
Confidence 457777743321101113589999997654
No 44
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=58.28 E-value=5 Score=27.45 Aligned_cols=29 Identities=31% Similarity=0.599 Sum_probs=18.0
Q ss_pred CCCCCCCcccceecCCC------CceecCCCCCcc
Q psy2284 128 KPSKFPNRHFCAVCGFP------SNYTCVPCGARY 156 (175)
Q Consensus 128 ~ps~~P~r~~C~VCG~~------~~YtC~~Cg~ry 156 (175)
++...|....|.-||.. ....|+.||-|.
T Consensus 14 ~~~~~~v~Y~C~~Cg~~~~l~~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 14 PPRPATMIYLCADCGARNTIQAKEVIRCRECGHRV 48 (63)
T ss_dssp -----CCCCBCSSSCCBCCCCSSSCCCCSSSCCCC
T ss_pred CCCCCCeEEECCCCCCeeecCCCCceECCCCCcEE
Confidence 44445777899999921 246799999774
No 45
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=58.05 E-value=4.8 Score=24.97 Aligned_cols=24 Identities=29% Similarity=0.956 Sum_probs=19.2
Q ss_pred CCCcccceecC--CCCceecCCCCCc
Q psy2284 132 FPNRHFCAVCG--FPSNYTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~~YtC~~Cg~r 155 (175)
+....+|.+|| -|-.|.|..|+..
T Consensus 11 ~~~pt~C~~C~~~l~qG~~C~~C~~~ 36 (52)
T 1faq_A 11 FLKLAFCDICQKFLLNGFRCQTCGYK 36 (52)
T ss_dssp CSSCEECTTSSSEECSEEECTTTTCC
T ss_pred CCCCcCCCCcccccccCCEeCCCCCe
Confidence 45568999999 5788999988753
No 46
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.16 E-value=7 Score=26.92 Aligned_cols=31 Identities=32% Similarity=0.803 Sum_probs=21.8
Q ss_pred CCCCcccceecC--CCC----ceecCCCCCcccccccc
Q psy2284 131 KFPNRHFCAVCG--FPS----NYTCVPCGARYCCVRCL 162 (175)
Q Consensus 131 ~~P~r~~C~VCG--~~~----~YtC~~Cg~ryCS~~C~ 162 (175)
.+....+|.+|+ .|| -|.|..|+.. |-.+|.
T Consensus 24 ~~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~-~Hk~C~ 60 (83)
T 2yuu_A 24 FFGQPTFCSVCKDFVWGLNKQGYKCRQCNAA-IHKKCI 60 (83)
T ss_dssp CCSSCCCCSSSCCCCCSSSCCEEEETTTCCE-ECTTGG
T ss_pred eCCCCcChhhcChhhccccccccccCCcCCe-eChhhh
Confidence 355678999999 665 6889999764 444443
No 47
>3c5k_A HD6, histone deacetylase 6; HDAC6, zinc finger, actin-binding, chromatin regulator, cytoplasm, hydrolase, metal-binding, nucleus, phosphoprotein; 1.55A {Homo sapiens} PDB: 3gv4_A 3phd_A
Probab=56.84 E-value=6.6 Score=28.96 Aligned_cols=29 Identities=28% Similarity=0.746 Sum_probs=23.1
Q ss_pred CCCcccceecC-CCCceecCCCCCcccccc
Q psy2284 132 FPNRHFCAVCG-FPSNYTCVPCGARYCCVR 160 (175)
Q Consensus 132 ~P~r~~C~VCG-~~~~YtC~~Cg~ryCS~~ 160 (175)
.+.-..|++|+ ....+-|..||.-.|+..
T Consensus 21 ~~~~~~C~~C~~~~~~W~CL~CG~vgCgr~ 50 (109)
T 3c5k_A 21 LDVTQPCGDCGTIQENWVCLSCYQVYCGRY 50 (109)
T ss_dssp CCTTCCCTTTCCCSSEEEETTTCCEEECTT
T ss_pred CCcCCcCccccCCCCeeeeeecCccccCCC
Confidence 34467899999 666889999999999743
No 48
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=56.71 E-value=4.5 Score=26.92 Aligned_cols=23 Identities=22% Similarity=0.531 Sum_probs=17.6
Q ss_pred CCCcccceecC---CCC--ceecCCCCC
Q psy2284 132 FPNRHFCAVCG---FPS--NYTCVPCGA 154 (175)
Q Consensus 132 ~P~r~~C~VCG---~~~--~YtC~~Cg~ 154 (175)
+....+|.+|| .++ .|+|..|+.
T Consensus 16 ~~~~~~C~~Cg~~i~~gkq~~kC~dC~~ 43 (61)
T 4b6d_A 16 VIKPESCVPCGKRIKFGKLSLKCRDCRV 43 (61)
T ss_dssp CCSCEECTTTCCEECTTCEEEEESSSSC
T ss_pred ccCCcccccccCEEEEeeEeeECCCCCC
Confidence 44568999999 344 499999986
No 49
>2zjr_Z 50S ribosomal protein L32; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: g.41.8.5 PDB: 1j5a_M* 1jzy_M* 1jzz_M* 1k01_M* 1nkw_Z 1ond_Z* 1sm1_Z* 1yl3_5 2b66_5 2b9n_5 2b9p_5 2zjp_Y* 2zjq_Z 1jzx_M 3cf5_Y* 3dll_Y* 3pio_Z* 3pip_Z* 1nwy_Z* 1nwx_Z* ...
Probab=56.51 E-value=4.4 Score=27.22 Aligned_cols=23 Identities=35% Similarity=0.621 Sum_probs=15.6
Q ss_pred CCCcccceecC--CCCceecCCCCC
Q psy2284 132 FPNRHFCAVCG--FPSNYTCVPCGA 154 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~~YtC~~Cg~ 154 (175)
.|....|..|| .....-|+.||.
T Consensus 27 ~p~l~~c~~cG~~~~pH~vc~~CG~ 51 (60)
T 2zjr_Z 27 APNLTECPQCHGKKLSHHICPNCGY 51 (60)
T ss_dssp CCCCEECTTTCCEECTTBCCTTTCB
T ss_pred CCCceECCCCCCEeCCceEcCCCCc
Confidence 45666788888 445566888874
No 50
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=55.85 E-value=3.4 Score=31.51 Aligned_cols=24 Identities=33% Similarity=0.848 Sum_probs=17.6
Q ss_pred CCCcccceecC--CCC---ceecCCCCCc
Q psy2284 132 FPNRHFCAVCG--FPS---NYTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~---~YtC~~Cg~r 155 (175)
..-...|.-|| |.. ...||.||..
T Consensus 129 ~~~~y~C~~Cg~~~~~~~~~~~Cp~CG~~ 157 (165)
T 2lcq_A 129 IKWRYVCIGCGRKFSTLPPGGVCPDCGSK 157 (165)
T ss_dssp CCCCEEESSSCCEESSCCGGGBCTTTCCB
T ss_pred ccEEEECCCCCCcccCCCCCCcCCCCCCc
Confidence 44467899999 543 3469999975
No 51
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=55.73 E-value=3.1 Score=28.68 Aligned_cols=35 Identities=31% Similarity=0.709 Sum_probs=25.3
Q ss_pred CCCcccceecC--CC---------------CceecCCCCCcccccccccccc
Q psy2284 132 FPNRHFCAVCG--FP---------------SNYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 132 ~P~r~~C~VCG--~~---------------~~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
....+.|.+|| |. -.|.|.-||..|-...-+..|.
T Consensus 25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~ 76 (85)
T 2lv2_A 25 SAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI 76 (85)
T ss_dssp CCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred CCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence 34557899999 32 2488999999887776666663
No 52
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=55.17 E-value=6.9 Score=23.98 Aligned_cols=25 Identities=28% Similarity=0.826 Sum_probs=18.6
Q ss_pred CCCCcccceecC--CCC----ceecCCCCCc
Q psy2284 131 KFPNRHFCAVCG--FPS----NYTCVPCGAR 155 (175)
Q Consensus 131 ~~P~r~~C~VCG--~~~----~YtC~~Cg~r 155 (175)
++....+|.+|| .|| -|.|..|+..
T Consensus 7 ~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 37 (50)
T 1ptq_A 7 NYMSPTFCDHCGSLLWGLVKQGLKCEDCGMN 37 (50)
T ss_dssp CCSSCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred cCCCCCCcCCCCceeeccCCccCEeCCCCCe
Confidence 355678999999 565 5889888753
No 53
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=54.97 E-value=8.9 Score=30.01 Aligned_cols=55 Identities=18% Similarity=0.248 Sum_probs=35.6
Q ss_pred hccccHHHHHHHhhhccCCCCCccccccCCCC----CCCccccee--cCC------CCceecCCCCCc
Q psy2284 100 RFRKSLAQMIEEDKALNSQGSAYENAEAKPSK----FPNRHFCAV--CGF------PSNYTCVPCGAR 155 (175)
Q Consensus 100 r~rKnf~~lleE~~~~~~~~p~Y~~a~a~ps~----~P~r~~C~V--CG~------~~~YtC~~Cg~r 155 (175)
.-||++.++.++. +...+.|.|.+..|--+. -.--.-|.. |+. .|.|.|.+|+.-
T Consensus 5 ~~~kti~qi~~~~-lg~~~k~~~f~v~atI~~i~~d~~~Y~aC~~~~CnKKv~~~~~g~~~CekC~~~ 71 (181)
T 1l1o_C 5 TNWKTLYEVKSEN-LGQGDKPDYFSSVATVVYLRKENCMYQACPTQDCNKKVIDQQNGLYRCEKCDTE 71 (181)
T ss_dssp CCBCCHHHHHHHT-TTSSSSCEEEEEEEEEEEECCSTTEEEBCCSTTCCCBCEEETTTEEEETTTTEE
T ss_pred cceEEHHHHhhhc-cCCCCCCcEEEEEEEEEEEeCCCEEECCCCchhcCCccccCCCCeEECCCCCCc
Confidence 3589999988774 444567888877662111 122446777 883 356889888764
No 54
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=54.01 E-value=3.4 Score=20.43 Aligned_cols=21 Identities=24% Similarity=0.488 Sum_probs=14.3
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|....=+..|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~ 22 (29)
T 2m0e_A 2 EHKCPHCDKKFNQVGNLKAHL 22 (29)
T ss_dssp CCCCSSCCCCCCTTTHHHHHH
T ss_pred CCcCCCCCcccCCHHHHHHHH
Confidence 377888888887665555553
No 55
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=53.76 E-value=3.1 Score=20.89 Aligned_cols=22 Identities=23% Similarity=0.471 Sum_probs=16.1
Q ss_pred ceecCCCCCccccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
.|.|..||..|-...-+..|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 2 KFACPECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp CEECSSSSCEESCSHHHHHHHT
T ss_pred CccCCCCCchhCCHHHHHHHHH
Confidence 3789999988877766666643
No 56
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=53.46 E-value=6.2 Score=27.39 Aligned_cols=40 Identities=28% Similarity=0.630 Sum_probs=25.2
Q ss_pred CCcccceecCC-------CCceecCCCCCcccccccccc---cccccccc
Q psy2284 133 PNRHFCAVCGF-------PSNYTCVPCGARYCCVRCLGT---HQDTRCLK 172 (175)
Q Consensus 133 P~r~~C~VCG~-------~~~YtC~~Cg~ryCS~~C~~~---H~etRC~K 172 (175)
|..++|.-|++ ....+|+.||..||..==..- |....|..
T Consensus 23 ~~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w~~~H~~~sC~~ 72 (86)
T 2ct7_A 23 PKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQHRGRSCED 72 (86)
T ss_dssp CCEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCTTTTTSCHHH
T ss_pred CCEeECcCCCchheecCCCCceEeCCCCCccccccCCchhhcCCCCChHH
Confidence 34445666664 234679999999986433344 77777754
No 57
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=52.66 E-value=3.4 Score=20.41 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=14.9
Q ss_pred eecCCCCCccccccccccccc
Q psy2284 147 YTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 147 YtC~~Cg~ryCS~~C~~~H~e 167 (175)
|.|..||..|-+..-+..|..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQR 22 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGG
T ss_pred ccCCCCCCcCCCHHHHHHHHH
Confidence 778888888877666655543
No 58
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=52.60 E-value=5.8 Score=29.95 Aligned_cols=37 Identities=22% Similarity=0.574 Sum_probs=18.5
Q ss_pred CCccccccCCCCCCCcccceecC-CCC----ceecCCCCCccccc
Q psy2284 120 SAYENAEAKPSKFPNRHFCAVCG-FPS----NYTCVPCGARYCCV 159 (175)
Q Consensus 120 p~Y~~a~a~ps~~P~r~~C~VCG-~~~----~YtC~~Cg~ryCS~ 159 (175)
|+|....+|.+.. ..|..|+ .++ +.-|..||.-||+.
T Consensus 7 ~~~~~~~~Pd~~~---~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~ 48 (120)
T 1y02_A 7 PGYSSFPSPTGLE---PSCKSCGAHFANTARKQTCLDCKKNFCMT 48 (120)
T ss_dssp ----------------CCCTTTCCCCSSGGGCEECTTTCCEECGG
T ss_pred CCcccCCcCcccc---CcccCcCCccccccccccCCCCCCeeCHH
Confidence 4454444433332 4899999 232 45699999999984
No 59
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=51.85 E-value=5.5 Score=23.36 Aligned_cols=22 Identities=32% Similarity=0.883 Sum_probs=16.2
Q ss_pred CcccceecC---CCCceecCCCCCc
Q psy2284 134 NRHFCAVCG---FPSNYTCVPCGAR 155 (175)
Q Consensus 134 ~r~~C~VCG---~~~~YtC~~Cg~r 155 (175)
.-..|..|| |...-.|.+||+.
T Consensus 4 gDW~C~~C~~~Nfa~r~~C~~C~~p 28 (32)
T 2lk0_A 4 EDWLCNKCCLNNFRKRLKCFRCGAD 28 (32)
T ss_dssp SEEECTTTCCEEETTCCBCTTTCCB
T ss_pred CCCCcCcCcCCcChhcceecCCCCc
Confidence 445777788 6667789999874
No 60
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=50.23 E-value=9.5 Score=34.51 Aligned_cols=34 Identities=29% Similarity=0.685 Sum_probs=25.3
Q ss_pred CCCCCcccceecC--CCC----ceecCCCCCcccccccccc
Q psy2284 130 SKFPNRHFCAVCG--FPS----NYTCVPCGARYCCVRCLGT 164 (175)
Q Consensus 130 s~~P~r~~C~VCG--~~~----~YtC~~Cg~ryCS~~C~~~ 164 (175)
..+....+|.+|+ .|| .|.|..||.-.|. +|...
T Consensus 524 ~~~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk-~C~~~ 563 (587)
T 3ky9_A 524 FSFEETTSCKACQMLLRGTFYQGYRCHRCRASAHK-ECLGR 563 (587)
T ss_dssp ECCSSCCBCTTTCSBCCSSSCCEEEETTTCCEECS-GGGGG
T ss_pred EeCCCCcccccccccccccccCCcCCCCCCCccch-hhhhc
Confidence 3456778999999 566 6899999987765 35543
No 61
>3v2d_5 50S ribosomal protein L32; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 2hgq_4 2hgj_4 2hgu_4 2j03_5 2jl6_5 2jl8_5 2v47_5 2v49_5 2wdi_5 2wdj_5 2wdl_5 2wdn_5 2wh2_5 2wh4_5 2wrj_5 2wrl_5 2wro_5 2wrr_5 2x9s_5 2x9u_5 ...
Probab=49.77 E-value=5.8 Score=26.65 Aligned_cols=22 Identities=32% Similarity=0.726 Sum_probs=15.6
Q ss_pred CCCcccceecC--CCCceecCCCC
Q psy2284 132 FPNRHFCAVCG--FPSNYTCVPCG 153 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~~YtC~~Cg 153 (175)
.|....|..|| .....-|+.||
T Consensus 27 ~p~l~~c~~cGe~~~~H~vc~~CG 50 (60)
T 3v2d_5 27 PPTLVPCPECKAMKPPHTVCPECG 50 (60)
T ss_dssp CCCCEECTTTCCEECTTSCCTTTC
T ss_pred CCceeECCCCCCeecceEEcCCCC
Confidence 35567788888 44566688888
No 62
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.38 E-value=11 Score=26.20 Aligned_cols=24 Identities=25% Similarity=0.791 Sum_probs=19.0
Q ss_pred CCCcccceecC--CCC----ceecCCCCCc
Q psy2284 132 FPNRHFCAVCG--FPS----NYTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~----~YtC~~Cg~r 155 (175)
+....+|.+|+ .|| -|.|..|+..
T Consensus 25 ~~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~ 54 (85)
T 2eli_A 25 YGSPTFCDHCGSLLYGLIHQGMKCDTCDMN 54 (85)
T ss_dssp CSSCCBCSSSCCBCCCSSSCEEECSSSCCE
T ss_pred CCCCcCCcccCccccccccCCCcCCCcCCc
Confidence 55678999999 665 5889999864
No 63
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=48.88 E-value=4.1 Score=20.21 Aligned_cols=20 Identities=25% Similarity=0.607 Sum_probs=14.1
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|..||..|-...-+..|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRH 21 (29)
T ss_dssp CEECTTTSCEESCHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHH
Confidence 47888898887765555544
No 64
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=52.03 E-value=4.2 Score=20.40 Aligned_cols=22 Identities=23% Similarity=0.590 Sum_probs=15.6
Q ss_pred ceecCCCCCccccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
.|.|..||..|-...-+..|..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~ 24 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVR 24 (30)
Confidence 4778888888777666666643
No 65
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=46.12 E-value=4.4 Score=20.24 Aligned_cols=21 Identities=33% Similarity=0.770 Sum_probs=14.7
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~ 23 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHY 23 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHH
Confidence 478888888877665555554
No 66
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=45.96 E-value=11 Score=24.56 Aligned_cols=25 Identities=28% Similarity=0.826 Sum_probs=18.5
Q ss_pred CCCCcccceecC--CCC----ceecCCCCCc
Q psy2284 131 KFPNRHFCAVCG--FPS----NYTCVPCGAR 155 (175)
Q Consensus 131 ~~P~r~~C~VCG--~~~----~YtC~~Cg~r 155 (175)
.+....+|.+|+ .|| -|.|..|+..
T Consensus 16 ~~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 46 (65)
T 3uej_A 16 NYMSPTFCDHCGSLLWGLVKQGLKCEDCGMN 46 (65)
T ss_dssp CCSSCCBCTTTCCBCCSSSSCEEEETTTCCE
T ss_pred eCCCCCcccccChhhhccCceeeECCCCCCe
Confidence 345678999999 464 6889988753
No 67
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=45.33 E-value=12 Score=24.43 Aligned_cols=24 Identities=29% Similarity=0.879 Sum_probs=18.2
Q ss_pred CCCcccceecC--CCC----ceecCCCCCc
Q psy2284 132 FPNRHFCAVCG--FPS----NYTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~----~YtC~~Cg~r 155 (175)
+....+|.+|+ .|| -|.|..|+..
T Consensus 20 ~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~ 49 (65)
T 2enz_A 20 YKSPTFCEHCGTLLWGLARQGLKCDACGMN 49 (65)
T ss_dssp CCSCCBCSSSCCBCCCSSSCSEEESSSCCE
T ss_pred CCCCcCchhcChhheecCCcccccCCCCCc
Confidence 55668999999 564 5889888753
No 68
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=51.11 E-value=4.5 Score=19.97 Aligned_cols=20 Identities=35% Similarity=0.785 Sum_probs=13.2
Q ss_pred eecCCCCCcccccccccccc
Q psy2284 147 YTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 147 YtC~~Cg~ryCS~~C~~~H~ 166 (175)
|.|..||..|-...=+..|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~ 22 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHI 22 (26)
Confidence 67778887776655555553
No 69
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=45.07 E-value=14 Score=21.70 Aligned_cols=23 Identities=22% Similarity=0.637 Sum_probs=16.8
Q ss_pred CCcccceecC---CCCceecCCCCCc
Q psy2284 133 PNRHFCAVCG---FPSNYTCVPCGAR 155 (175)
Q Consensus 133 P~r~~C~VCG---~~~~YtC~~Cg~r 155 (175)
+.-..|..|| |...-.|.+|++.
T Consensus 4 ~gDW~C~~C~~~Nfa~R~~C~~C~~p 29 (33)
T 2k1p_A 4 ANDWQCKTCSNVNWARRSECNMCNTP 29 (33)
T ss_dssp SSSCBCSSSCCBCCTTCSBCSSSCCB
T ss_pred CCCcccCCCCCccccccccccccCCc
Confidence 4446788888 5567779999875
No 70
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=44.93 E-value=8.9 Score=26.67 Aligned_cols=10 Identities=30% Similarity=0.614 Sum_probs=4.9
Q ss_pred eecCCCCCcc
Q psy2284 147 YTCVPCGARY 156 (175)
Q Consensus 147 YtC~~Cg~ry 156 (175)
.+||.|...+
T Consensus 59 ~~CP~Cr~~~ 68 (100)
T 3lrq_A 59 AQCPHCRAPL 68 (100)
T ss_dssp SBCTTTCCBC
T ss_pred CCCCCCCCcC
Confidence 3455555443
No 71
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=44.42 E-value=8.9 Score=27.25 Aligned_cols=25 Identities=16% Similarity=0.400 Sum_probs=18.6
Q ss_pred CCCCCcccceecC--CCC------ceecCCCCC
Q psy2284 130 SKFPNRHFCAVCG--FPS------NYTCVPCGA 154 (175)
Q Consensus 130 s~~P~r~~C~VCG--~~~------~YtC~~Cg~ 154 (175)
-.+....||.+|| .|| .|.|..|+.
T Consensus 30 ~~~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~ 62 (84)
T 2row_A 30 TLYHFPTNCEACMKPLWHMFKPPPALECRRCHI 62 (84)
T ss_dssp ECCSSCEECSSSSSEECCSSSCCCEEEESSSCC
T ss_pred EcCCCCcchhhcCHhhhccccCCCCCEecCCCC
Confidence 3466778999999 776 677877754
No 72
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=43.58 E-value=5 Score=19.96 Aligned_cols=20 Identities=20% Similarity=0.487 Sum_probs=13.4
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|..||..|-...-+..|
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H 22 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKH 22 (27)
T ss_dssp CEECSSSSCEESSHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHH
Confidence 47888888877665544444
No 73
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=43.25 E-value=5.9 Score=19.90 Aligned_cols=20 Identities=25% Similarity=0.477 Sum_probs=14.5
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|..||..|-...-+..|
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H 21 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRH 21 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHH
T ss_pred CcCCcccCcccCChHHHHHH
Confidence 37888888888776655555
No 74
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=43.05 E-value=6.8 Score=32.51 Aligned_cols=22 Identities=27% Similarity=0.863 Sum_probs=16.1
Q ss_pred CcccceecCCCC-------ceecCCCCCc
Q psy2284 134 NRHFCAVCGFPS-------NYTCVPCGAR 155 (175)
Q Consensus 134 ~r~~C~VCG~~~-------~YtC~~Cg~r 155 (175)
.-+||+.||.+- ...|+.||..
T Consensus 106 ~~~fC~~CG~~~~~~~~~~~~~C~~C~~~ 134 (269)
T 1vk6_A 106 SHKYCGYCGHEMYPSKTEWAMLCSHCRER 134 (269)
T ss_dssp TTSBCTTTCCBEEECSSSSCEEESSSSCE
T ss_pred cCCccccCCCcCccCCCceeeeCCCCCCE
Confidence 357999999543 4569999874
No 75
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=42.20 E-value=35 Score=27.47 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=19.5
Q ss_pred cccceecC-CCC----ceecCCCCCccccc
Q psy2284 135 RHFCAVCG-FPS----NYTCVPCGARYCCV 159 (175)
Q Consensus 135 r~~C~VCG-~~~----~YtC~~Cg~ryCS~ 159 (175)
-..|.+|+ .++ +.-|..||.-+|+.
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~ 193 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGK 193 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTT
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChh
Confidence 35899999 222 57799999999984
No 76
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=41.60 E-value=6.4 Score=20.79 Aligned_cols=22 Identities=23% Similarity=0.605 Sum_probs=15.6
Q ss_pred ceecCCCCCccccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
.|.|..||..|-...-+..|..
T Consensus 2 p~~C~~C~k~f~~~~~L~~H~~ 23 (32)
T 2kfq_A 2 AFACPACPKRFMRSDALSKHIK 23 (32)
T ss_dssp CSSSSSSCTTHHHHHTTSSSTT
T ss_pred CCCCCCCCcccCCHHHHHHHHH
Confidence 3788889888877666666643
No 77
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=41.56 E-value=5.9 Score=19.64 Aligned_cols=20 Identities=35% Similarity=0.496 Sum_probs=13.5
Q ss_pred eecCCCCCcccccccccccc
Q psy2284 147 YTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 147 YtC~~Cg~ryCS~~C~~~H~ 166 (175)
|.|..||..|-...-+..|.
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~ 22 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHI 22 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHH
T ss_pred ccCCCCCCccCCHHHHHHHH
Confidence 77888888776655555553
No 78
>3irb_A Uncharacterized protein from DUF35 family; 13815350, protein with unknown function from DUF35 family, S genomics; 1.80A {Sulfolobus solfataricus}
Probab=41.36 E-value=6.6 Score=29.99 Aligned_cols=21 Identities=29% Similarity=0.752 Sum_probs=14.2
Q ss_pred cccceecC---CCCceecCCCCCc
Q psy2284 135 RHFCAVCG---FPSNYTCVPCGAR 155 (175)
Q Consensus 135 r~~C~VCG---~~~~YtC~~Cg~r 155 (175)
-..|.-|| |+....|+.||..
T Consensus 47 ~~rC~~CG~~~~PPr~~Cp~C~s~ 70 (145)
T 3irb_A 47 GSKCSKCGRIFVPARSYCEHCFVK 70 (145)
T ss_dssp EEECTTTCCEEESCCSEETTTTEE
T ss_pred EEEeCCCCcEEcCchhhCcCCCCC
Confidence 34578887 5666778888754
No 79
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=41.30 E-value=6 Score=19.60 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=14.0
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~ 23 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHL 23 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHH
Confidence 478888888776655444443
No 80
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=40.93 E-value=4.5 Score=20.39 Aligned_cols=21 Identities=24% Similarity=0.496 Sum_probs=14.5
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~ 23 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHM 23 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHH
T ss_pred CcCCCCCCcccCCHHHHHHHH
Confidence 478888888876655555553
No 81
>1wfe_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=40.67 E-value=15 Score=26.13 Aligned_cols=32 Identities=16% Similarity=0.371 Sum_probs=24.2
Q ss_pred CCCCCCCccccee--cCCC--CceecCCCCCccccc
Q psy2284 128 KPSKFPNRHFCAV--CGFP--SNYTCVPCGARYCCV 159 (175)
Q Consensus 128 ~ps~~P~r~~C~V--CG~~--~~YtC~~Cg~ryCS~ 159 (175)
+.+..+...-|++ |+.. -.+.|..||.-||..
T Consensus 18 ~~~~~~~~~~C~~~~Ck~~~~l~f~C~~C~~~FC~~ 53 (86)
T 1wfe_A 18 PKTDEHKSYSCSFKGCTDVELVAVICPYCEKNFCLR 53 (86)
T ss_dssp CCCSCSCCEECCSTTCCCEESSCEECTTTCCEECGG
T ss_pred ccccCCCCCCCCCcCCCCCCccceECCCCCcccccc
Confidence 4445556678999 9933 477899999999974
No 82
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=40.52 E-value=9.1 Score=29.25 Aligned_cols=24 Identities=25% Similarity=0.809 Sum_probs=17.7
Q ss_pred CCCcccceecC---CCC--------ceecCCCCCc
Q psy2284 132 FPNRHFCAVCG---FPS--------NYTCVPCGAR 155 (175)
Q Consensus 132 ~P~r~~C~VCG---~~~--------~YtC~~Cg~r 155 (175)
...-.||.-|| ++. .|.|..||-.
T Consensus 21 ~~~~~FCPeCgNmL~pked~~~~~l~~~CrtCgY~ 55 (133)
T 3qt1_I 21 MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYV 55 (133)
T ss_dssp -CCCCBCTTTCCBCBCCBCTTTCCBCCBCSSSCCB
T ss_pred ccCCeeCCCCCCEeeECccCCCceeEEECCCCCCc
Confidence 45678999999 444 3899999863
No 83
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=39.68 E-value=12 Score=25.57 Aligned_cols=36 Identities=31% Similarity=0.792 Sum_probs=26.8
Q ss_pred CCCcccceecC----CCCceecCCCCCcccccccccc-cccc
Q psy2284 132 FPNRHFCAVCG----FPSNYTCVPCGARYCCVRCLGT-HQDT 168 (175)
Q Consensus 132 ~P~r~~C~VCG----~~~~YtC~~Cg~ryCS~~C~~~-H~et 168 (175)
-+...+|.+|- ..+--+|..|...|| -.|... |.+.
T Consensus 27 ~~~~v~C~~C~~~~~~~A~ksCl~C~~s~C-~~hl~~~H~~~ 67 (78)
T 2ffw_A 27 SAEKVLCQFCDQDPAQDAVKTCVTCEVSYC-DECLKATHPNK 67 (78)
T ss_dssp SSCCCBCSSCCSSSCCBCCEEETTTTEEEC-HHHHHHHSCCC
T ss_pred CCCCccCCcCCCCCCCCCeeEccCccchhh-hhhhHhhcCCC
Confidence 35567899995 345667999999999 567774 8664
No 84
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=39.48 E-value=15 Score=26.26 Aligned_cols=25 Identities=36% Similarity=0.910 Sum_probs=19.2
Q ss_pred CCCcccceecCCCCc----eecCCCCCcc
Q psy2284 132 FPNRHFCAVCGFPSN----YTCVPCGARY 156 (175)
Q Consensus 132 ~P~r~~C~VCG~~~~----YtC~~Cg~ry 156 (175)
-....+|.|||..+. ..|..|+..|
T Consensus 4 ~~~~~~C~~C~~~g~~~~ll~C~~C~~~~ 32 (111)
T 2ysm_A 4 GSSGANCAVCDSPGDLLDQFFCTTCGQHY 32 (111)
T ss_dssp CCCCSCBTTTCCCCCTTTSEECSSSCCEE
T ss_pred CCCCCCCcCCCCCCCCcCCeECCCCCCCc
Confidence 445678999998776 4799998766
No 85
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=45.63 E-value=6.2 Score=19.78 Aligned_cols=21 Identities=29% Similarity=0.556 Sum_probs=14.0
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|.-||..|-...=+..|.
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~ 22 (29)
T 2lvt_A 2 PCQCVMCGKAFTQASSLIAHV 22 (29)
Confidence 367888887776665555554
No 86
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.17 E-value=17 Score=25.12 Aligned_cols=27 Identities=15% Similarity=0.273 Sum_probs=18.5
Q ss_pred CCCCcccceecC--CCCceecCCCCCccc
Q psy2284 131 KFPNRHFCAVCG--FPSNYTCVPCGARYC 157 (175)
Q Consensus 131 ~~P~r~~C~VCG--~~~~YtC~~Cg~ryC 157 (175)
..+....|.||+ +.-.++-+.||.-||
T Consensus 3 ~~~~~~~CPI~~~~~~dPV~~~~cGh~f~ 31 (94)
T 2yu4_A 3 SGSSGFTCPITKEEMKKPVKNKVCGHTYE 31 (94)
T ss_dssp SCSSCCBCTTTCSBCSSEEEESSSCCEEE
T ss_pred CCCcEeECcCcCchhcCCEEcCCCCCeec
Confidence 345667899998 444555556898887
No 87
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.13 E-value=7.2 Score=20.77 Aligned_cols=21 Identities=24% Similarity=0.466 Sum_probs=14.8
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~ 29 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHL 29 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHH
Confidence 588888888877665555553
No 88
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=37.93 E-value=13 Score=23.13 Aligned_cols=21 Identities=24% Similarity=0.705 Sum_probs=15.1
Q ss_pred ccceecCC--------CCceecCCCCCcc
Q psy2284 136 HFCAVCGF--------PSNYTCVPCGARY 156 (175)
Q Consensus 136 ~~C~VCG~--------~~~YtC~~Cg~ry 156 (175)
..|.+||. .+.+.|..||.-|
T Consensus 6 ~~CP~C~~~~l~~d~~~gelvC~~CG~v~ 34 (50)
T 1pft_A 6 KVCPACESAELIYDPERGEIVCAKCGYVI 34 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred EeCcCCCCcceEEcCCCCeEECcccCCcc
Confidence 45888875 2567899888765
No 89
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=37.93 E-value=20 Score=25.40 Aligned_cols=23 Identities=22% Similarity=0.375 Sum_probs=14.0
Q ss_pred CcccceecC-CCCceecCCCCCcc
Q psy2284 134 NRHFCAVCG-FPSNYTCVPCGARY 156 (175)
Q Consensus 134 ~r~~C~VCG-~~~~YtC~~Cg~ry 156 (175)
.-.||.-|- .|-..+||-|...+
T Consensus 42 gH~fC~~Ci~~~~~~~CP~Cr~~~ 65 (117)
T 1jm7_B 42 EHIFCSNCVSDCIGTGCPVCYTPA 65 (117)
T ss_dssp SCCBCTTTGGGGTTTBCSSSCCBC
T ss_pred CCHHHHHHHHHHhcCCCcCCCCcC
Confidence 445777776 33336677777664
No 90
>3dzy_D Peroxisome proliferator-activated receptor gamma; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_D* 3e00_D* 2env_A
Probab=37.69 E-value=3.6 Score=36.22 Aligned_cols=26 Identities=31% Similarity=0.506 Sum_probs=13.8
Q ss_pred CCCCCCcccceecCCC------CceecCCCCC
Q psy2284 129 PSKFPNRHFCAVCGFP------SNYTCVPCGA 154 (175)
Q Consensus 129 ps~~P~r~~C~VCG~~------~~YtC~~Cg~ 154 (175)
|+..+....|.|||-. |-++|-.|..
T Consensus 44 ~~~~~~~~~C~vC~~~~~g~hygv~~C~~C~~ 75 (419)
T 3dzy_D 44 PSNSLMAIECRVCGDKASGFHYGVHACEGCKG 75 (419)
T ss_dssp ------CCCCSSSCSCCCSBCSSSBCCHHHHH
T ss_pred CCCCCCCCcCeECCCcCCCCccCcccchhhhH
Confidence 3444556689999943 3456777753
No 91
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=37.26 E-value=51 Score=26.10 Aligned_cols=25 Identities=24% Similarity=0.648 Sum_probs=19.8
Q ss_pred cccceecC-CCC----ceecCCCCCccccc
Q psy2284 135 RHFCAVCG-FPS----NYTCVPCGARYCCV 159 (175)
Q Consensus 135 r~~C~VCG-~~~----~YtC~~Cg~ryCS~ 159 (175)
-..|.+|+ .++ +.-|..||.-+|+.
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~ 190 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQ 190 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECST
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChH
Confidence 36999999 222 56799999999984
No 92
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.24 E-value=10 Score=25.60 Aligned_cols=21 Identities=24% Similarity=0.583 Sum_probs=15.2
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 80 ~~~C~~C~k~f~~~~~L~~H~ 100 (115)
T 2dmi_A 80 VLKCMYCGHSFESLQDLSVHM 100 (115)
T ss_dssp SCBCSSSCCBCSSHHHHHHHH
T ss_pred ceECCCCCCccCCHHHHHHHH
Confidence 588999998887666555553
No 93
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=37.17 E-value=7.3 Score=20.80 Aligned_cols=21 Identities=19% Similarity=0.558 Sum_probs=14.2
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|+.||..|-...-+..|.
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~ 31 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHR 31 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHH
T ss_pred CccCCCCCcccCcHHHHHHHH
Confidence 578888888776655555543
No 94
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=37.15 E-value=18 Score=24.29 Aligned_cols=24 Identities=29% Similarity=0.779 Sum_probs=18.9
Q ss_pred ccceecC-CCC----ceecCCCCCccccc
Q psy2284 136 HFCAVCG-FPS----NYTCVPCGARYCCV 159 (175)
Q Consensus 136 ~~C~VCG-~~~----~YtC~~Cg~ryCS~ 159 (175)
..|.+|+ .++ +.-|..||.-+|+.
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~ 40 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQE 40 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGG
T ss_pred CcccCCCCccCCccccccCCCCCEEEccc
Confidence 4799999 333 57799999999885
No 95
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=36.81 E-value=14 Score=23.57 Aligned_cols=12 Identities=33% Similarity=0.885 Sum_probs=8.8
Q ss_pred Cccccccccccc
Q psy2284 154 ARYCCVRCLGTH 165 (175)
Q Consensus 154 ~ryCS~~C~~~H 165 (175)
.||||+.|-+-.
T Consensus 26 KRFCS~~Carry 37 (43)
T 2w0t_A 26 KRFCSVSCSRSY 37 (43)
T ss_dssp SSSSSHHHHHHH
T ss_pred cceechhhhCcc
Confidence 479999986543
No 96
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.75 E-value=16 Score=24.64 Aligned_cols=32 Identities=25% Similarity=0.639 Sum_probs=22.9
Q ss_pred CCCCcccceecC--CCC----ceecCCCCCccccccccc
Q psy2284 131 KFPNRHFCAVCG--FPS----NYTCVPCGARYCCVRCLG 163 (175)
Q Consensus 131 ~~P~r~~C~VCG--~~~----~YtC~~Cg~ryCS~~C~~ 163 (175)
.+....+|.+|+ .|| -|.|..|+.. |-.+|..
T Consensus 24 ~f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~-~Hk~C~~ 61 (74)
T 2db6_A 24 FFKKPKFCDVCARMIVLNNKFGLRCKNCKTN-IHEHCQS 61 (74)
T ss_dssp ECSSCEECSSSCCEECHHHHEEEEESSSCCE-ECTTTTG
T ss_pred eCCCCcCchhcChhhccccCCccccCCCCCc-cChhHHh
Confidence 356678999999 675 5889998764 4445543
No 97
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.70 E-value=7.1 Score=21.25 Aligned_cols=20 Identities=30% Similarity=0.604 Sum_probs=15.4
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|..||..|-...-+..|
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H 28 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRH 28 (37)
T ss_dssp EEECSSSSCEEECHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHH
Confidence 58899999888776666665
No 98
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=36.63 E-value=13 Score=23.38 Aligned_cols=34 Identities=32% Similarity=0.686 Sum_probs=24.5
Q ss_pred CcccceecC--CC---------------CceecCCCCCccccccccccccc
Q psy2284 134 NRHFCAVCG--FP---------------SNYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 134 ~r~~C~VCG--~~---------------~~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
....|.+|| |. ..|.|+-||..|-...-+..|..
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~ 67 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGG
T ss_pred CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHH
Confidence 456799998 32 24899999998877666666643
No 99
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=36.51 E-value=15 Score=22.95 Aligned_cols=33 Identities=30% Similarity=0.566 Sum_probs=23.7
Q ss_pred CcccceecCCC-----------------CceecCCCCCcccccccccccc
Q psy2284 134 NRHFCAVCGFP-----------------SNYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 134 ~r~~C~VCG~~-----------------~~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
....|.+||.. -.|.|.-||..|-...-+..|.
T Consensus 16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~ 65 (74)
T 2lce_A 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65 (74)
T ss_dssp CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHH
T ss_pred CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHH
Confidence 44679999832 2489999999887766666554
No 100
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=36.46 E-value=13 Score=22.99 Aligned_cols=12 Identities=25% Similarity=0.697 Sum_probs=9.6
Q ss_pred CceecCCCCCcc
Q psy2284 145 SNYTCVPCGARY 156 (175)
Q Consensus 145 ~~YtC~~Cg~ry 156 (175)
..|+|++||..+
T Consensus 8 ~~~~C~~C~~~i 19 (39)
T 2i5o_A 8 DQVPCEKCGSLV 19 (39)
T ss_dssp CEEECTTTCCEE
T ss_pred CCcccccccCcC
Confidence 368899999865
No 101
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=36.45 E-value=15 Score=23.80 Aligned_cols=27 Identities=22% Similarity=0.381 Sum_probs=14.0
Q ss_pred CCCcccceecC-CCCceecCCCCCcccc
Q psy2284 132 FPNRHFCAVCG-FPSNYTCVPCGARYCC 158 (175)
Q Consensus 132 ~P~r~~C~VCG-~~~~YtC~~Cg~ryCS 158 (175)
.|....|.||. ....-.-..||-.||.
T Consensus 5 ~~~~~~C~IC~~~~~~Pv~~~CgH~fc~ 32 (78)
T 1t1h_A 5 FPEYFRCPISLELMKDPVIVSTGQTYER 32 (78)
T ss_dssp CSSSSSCTTTSCCCSSEEEETTTEEEEH
T ss_pred CcccCCCCCccccccCCEEcCCCCeecH
Confidence 45556677776 2222222346666653
No 102
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.31 E-value=3.8 Score=25.13 Aligned_cols=33 Identities=24% Similarity=0.610 Sum_probs=22.0
Q ss_pred cccceecC--C--------CCceecCCCCCccccccccccccc
Q psy2284 135 RHFCAVCG--F--------PSNYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 135 r~~C~VCG--~--------~~~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
...|.+|| | ...|.|..||..|-...=+..|..
T Consensus 18 ~~~C~~C~k~f~~~~~l~~~~~~~C~~C~~~f~~~~~l~~H~~ 60 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEG 60 (73)
T ss_dssp EEECSSSCCEEECCCCCCCSSSCCCHHHHHTCSCCCSSCCCSS
T ss_pred CeeCCcccchhCCHHHhCcCCCCCCCCCChhhcCHHHHHHHHH
Confidence 35688887 2 235788888887776666666543
No 103
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=35.93 E-value=8.1 Score=20.34 Aligned_cols=21 Identities=14% Similarity=0.349 Sum_probs=15.4
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~ 27 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHL 27 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHH
T ss_pred CeeCCCCCcccCCHHHHHHHH
Confidence 588999998887766655554
No 104
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=35.86 E-value=16 Score=24.14 Aligned_cols=36 Identities=33% Similarity=0.667 Sum_probs=23.0
Q ss_pred CCCCCcccceecC--CC---------------CceecCCCCCccccccccccc
Q psy2284 130 SKFPNRHFCAVCG--FP---------------SNYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 130 s~~P~r~~C~VCG--~~---------------~~YtC~~Cg~ryCS~~C~~~H 165 (175)
+.......|.+|| |. ..|.|..|+..|=...=+..|
T Consensus 12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H 64 (106)
T 2ee8_A 12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64 (106)
T ss_dssp CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHH
T ss_pred cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHH
Confidence 3344556788998 32 248899998877665444444
No 105
>2g45_A Ubiquitin carboxyl-terminal hydrolase 5; zinc finger, hydrolase; 1.99A {Homo sapiens} SCOP: g.44.1.5 PDB: 2g43_A 2l80_A
Probab=35.65 E-value=23 Score=26.80 Aligned_cols=28 Identities=21% Similarity=0.413 Sum_probs=22.0
Q ss_pred CCcccceecC-CCCceecCCCCCcccccc
Q psy2284 133 PNRHFCAVCG-FPSNYTCVPCGARYCCVR 160 (175)
Q Consensus 133 P~r~~C~VCG-~~~~YtC~~Cg~ryCS~~ 160 (175)
|.-..|++|+ ....+-|..||.-.|+..
T Consensus 32 ~~~~~C~~C~~~~~LwlCL~CG~vgCgr~ 60 (129)
T 2g45_A 32 PCGWKCSKCDMRENLWLNLTDGSILCGRR 60 (129)
T ss_dssp CCBCCCSSSSCCSSEEEETTTCCEEECCB
T ss_pred CCCCcCccccCcCceEEeccCCccccCcc
Confidence 3445799999 555788999999888765
No 106
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.09 E-value=7 Score=25.72 Aligned_cols=28 Identities=21% Similarity=0.434 Sum_probs=19.2
Q ss_pred CceecCCCCCcccccccccccccccccc
Q psy2284 145 SNYTCVPCGARYCCVRCLGTHQDTRCLK 172 (175)
Q Consensus 145 ~~YtC~~Cg~ryCS~~C~~~H~etRC~K 172 (175)
+.|.||+|+..|=...=++.|.-.-|-+
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~ 38 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCYCCPE 38 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred CceeCCcccccccchHHHHhhhhhcCcc
Confidence 4788999999886665555555544444
No 107
>2gnr_A Conserved hypothetical protein; 13815350, structural genomics, PSI, protein structure initiative; 1.80A {Sulfolobus solfataricus P2} PDB: 3irb_A
Probab=34.89 E-value=9.6 Score=29.26 Aligned_cols=22 Identities=27% Similarity=0.676 Sum_probs=16.3
Q ss_pred CcccceecC---CCCceecCCCCCc
Q psy2284 134 NRHFCAVCG---FPSNYTCVPCGAR 155 (175)
Q Consensus 134 ~r~~C~VCG---~~~~YtC~~Cg~r 155 (175)
.-..|.-|| |+....|+.||..
T Consensus 46 ~~~rC~~CG~~~fPPr~~Cp~C~s~ 70 (145)
T 2gnr_A 46 IGSKCSKCGRIFVPARSYCEHCFVK 70 (145)
T ss_dssp EEEECTTTCCEEESCCSEETTTTEE
T ss_pred EEEEECCCCcEEeCCCCCCCCCCCC
Confidence 345688888 6677789888764
No 108
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=34.86 E-value=8.6 Score=20.06 Aligned_cols=21 Identities=24% Similarity=0.558 Sum_probs=14.6
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|.-||..|-...-+..|.
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~ 27 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHI 27 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHH
T ss_pred CeECCCCcchhCCHHHHHHHH
Confidence 588888888876655555553
No 109
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=34.51 E-value=8.8 Score=18.93 Aligned_cols=19 Identities=21% Similarity=0.558 Sum_probs=12.0
Q ss_pred eecCCCCCccccccccccc
Q psy2284 147 YTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 147 YtC~~Cg~ryCS~~C~~~H 165 (175)
|.|..||..|-...=+..|
T Consensus 3 ~~C~~C~~~f~~~~~l~~H 21 (29)
T 1ard_A 3 FVCEVCTRAFARQEHLKRH 21 (29)
T ss_dssp CBCTTTCCBCSSHHHHHHH
T ss_pred eECCCCCcccCCHHHHHHH
Confidence 6788887776555444444
No 110
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=34.16 E-value=8.2 Score=20.55 Aligned_cols=20 Identities=25% Similarity=0.619 Sum_probs=13.9
Q ss_pred eecCCCCCcccccccccccc
Q psy2284 147 YTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 147 YtC~~Cg~ryCS~~C~~~H~ 166 (175)
|.|..||..|-...-+..|.
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~ 22 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHI 22 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHH
Confidence 77888888776665555553
No 111
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=34.13 E-value=19 Score=24.46 Aligned_cols=23 Identities=43% Similarity=1.078 Sum_probs=17.9
Q ss_pred CCCcccceecC--CCC----ceecCCCCC
Q psy2284 132 FPNRHFCAVCG--FPS----NYTCVPCGA 154 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~----~YtC~~Cg~ 154 (175)
+....+|.+|+ .|| -|.|..|+.
T Consensus 31 f~~pt~C~~C~~~lwGl~kqG~~C~~C~~ 59 (77)
T 2enn_A 31 FPQPTFCSVCHEFVWGLNKQGYQCRQCNA 59 (77)
T ss_dssp CSSCEECSSSCCEECCTTCCEEECSSSCC
T ss_pred CCCCcCccccChhhccccccccCcCCCCC
Confidence 55678999999 564 588998875
No 112
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=33.41 E-value=19 Score=23.55 Aligned_cols=29 Identities=24% Similarity=0.828 Sum_probs=20.5
Q ss_pred CCCcccceecC--CCC----ceecCCCCCccccccc
Q psy2284 132 FPNRHFCAVCG--FPS----NYTCVPCGARYCCVRC 161 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~----~YtC~~Cg~ryCS~~C 161 (175)
+....+|.+|+ .|| -|.|..|+.. |-.+|
T Consensus 21 ~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~-~Hk~C 55 (66)
T 1y8f_A 21 ATTPTYCYECEGLLWGIARQGMRCTECGVK-CHEKC 55 (66)
T ss_dssp CSSCCCCTTTCCCCCSSCCEEEEETTTCCE-ECTTH
T ss_pred CCCCcChhhcChhhcccCcceeEcCCCCCe-eCHHH
Confidence 45668999999 565 5889988764 44444
No 113
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=33.23 E-value=25 Score=22.93 Aligned_cols=26 Identities=19% Similarity=0.294 Sum_probs=18.0
Q ss_pred CCCCcccceecCC--------CCceecCCCCCcc
Q psy2284 131 KFPNRHFCAVCGF--------PSNYTCVPCGARY 156 (175)
Q Consensus 131 ~~P~r~~C~VCG~--------~~~YtC~~Cg~ry 156 (175)
.+.....|..||. .|.+.|..||.-+
T Consensus 7 ~ll~~~~Cp~C~~~~lv~D~~~ge~vC~~CGlVl 40 (58)
T 1dl6_A 7 DALPRVTCPNHPDAILVEDYRAGDMICPECGLVV 40 (58)
T ss_dssp CCCSCCSBTTBSSSCCEECSSSCCEECTTTCCEE
T ss_pred hccccccCcCCCCCceeEeCCCCeEEeCCCCCEE
Confidence 3455557999974 3577799998743
No 114
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.03 E-value=14 Score=24.16 Aligned_cols=22 Identities=27% Similarity=0.676 Sum_probs=12.5
Q ss_pred CcccceecC---CCCceecCCCCCc
Q psy2284 134 NRHFCAVCG---FPSNYTCVPCGAR 155 (175)
Q Consensus 134 ~r~~C~VCG---~~~~YtC~~Cg~r 155 (175)
..++|-.|| -++...|.+||..
T Consensus 13 ~k~iCpkC~a~~~~gaw~CrKCG~~ 37 (51)
T 3j21_g 13 KKYVCLRCGATNPWGAKKCRKCGYK 37 (51)
T ss_dssp SEEECTTTCCEECTTCSSCSSSSSC
T ss_pred CCccCCCCCCcCCCCceecCCCCCc
Confidence 345677776 3445556666643
No 115
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.00 E-value=9.3 Score=20.12 Aligned_cols=21 Identities=24% Similarity=0.442 Sum_probs=14.1
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~ 29 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHL 29 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHH
Confidence 578888888776655555443
No 116
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=32.37 E-value=14 Score=20.25 Aligned_cols=23 Identities=26% Similarity=0.520 Sum_probs=16.3
Q ss_pred CceecCCCCCccccccccccccc
Q psy2284 145 SNYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 145 ~~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
..|.|..||..|-...=+..|..
T Consensus 10 k~~~C~~C~k~f~~~~~L~~H~~ 32 (42)
T 2ytb_A 10 KPYRCDQCGKAFSQKGSLIVHIR 32 (42)
T ss_dssp CSBCCTTTTCCBSSHHHHHTTGG
T ss_pred CCeeCCCccchhCCHHHHHHHHH
Confidence 35888888888877666666543
No 117
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=32.20 E-value=22 Score=24.79 Aligned_cols=24 Identities=25% Similarity=0.801 Sum_probs=19.7
Q ss_pred cccee--cCCCC--ceecCCCCCccccc
Q psy2284 136 HFCAV--CGFPS--NYTCVPCGARYCCV 159 (175)
Q Consensus 136 ~~C~V--CG~~~--~YtC~~Cg~ryCS~ 159 (175)
.-|++ |+... .++|..|+.-||+.
T Consensus 15 ~~Cs~~~C~~~dflpf~C~~C~~~FC~~ 42 (75)
T 1wys_A 15 QHCQVQHCRQRDFLPFVCDGCSGIFCLE 42 (75)
T ss_dssp CCCSCTTTCCCSCCCEECTTTCCEECST
T ss_pred CCcCcccCCCccceeeECcccCcCcCcc
Confidence 57888 99444 78899999999984
No 118
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=32.14 E-value=18 Score=23.31 Aligned_cols=21 Identities=33% Similarity=0.909 Sum_probs=15.2
Q ss_pred ccceecCCCCce-ecCCCCCcc
Q psy2284 136 HFCAVCGFPSNY-TCVPCGARY 156 (175)
Q Consensus 136 ~~C~VCG~~~~Y-tC~~Cg~ry 156 (175)
.+|.|||..+.. -|-.|...|
T Consensus 6 ~~C~vC~~~g~ll~Cd~C~~~f 27 (60)
T 2puy_A 6 DFCSVCRKSGQLLMCDTCSRVY 27 (60)
T ss_dssp SSCTTTCCCSSCEECSSSSCEE
T ss_pred CCCcCCCCCCcEEEcCCCCcCE
Confidence 479999966644 488887554
No 119
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=32.01 E-value=19 Score=24.54 Aligned_cols=9 Identities=22% Similarity=0.641 Sum_probs=4.1
Q ss_pred eecCCCCCc
Q psy2284 147 YTCVPCGAR 155 (175)
Q Consensus 147 YtC~~Cg~r 155 (175)
.+||.|...
T Consensus 58 ~~CP~Cr~~ 66 (99)
T 2y43_A 58 TQCPTCCVT 66 (99)
T ss_dssp CBCTTTCCB
T ss_pred CCCCCCCCc
Confidence 345544443
No 120
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=31.68 E-value=22 Score=27.95 Aligned_cols=30 Identities=13% Similarity=0.145 Sum_probs=18.8
Q ss_pred CCCCCCcccceecC-CCCceecCCCCCcccc
Q psy2284 129 PSKFPNRHFCAVCG-FPSNYTCVPCGARYCC 158 (175)
Q Consensus 129 ps~~P~r~~C~VCG-~~~~YtC~~Cg~ryCS 158 (175)
+...|.-..|.||+ ....-....||.-||.
T Consensus 202 ~~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~ 232 (281)
T 2c2l_A 202 KRDIPDYLCGKISFELMREPCITPSGITYDR 232 (281)
T ss_dssp CCCCCSTTBCTTTCSBCSSEEECSSCCEEET
T ss_pred CCCCCcccCCcCcCCHhcCCeECCCCCEECH
Confidence 34456667788888 3333334558888774
No 121
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.21 E-value=11 Score=19.87 Aligned_cols=20 Identities=25% Similarity=0.554 Sum_probs=12.9
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|.-||..|-...-+..|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H 28 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSH 28 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHH
Confidence 47777787777665544444
No 122
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=31.16 E-value=15 Score=25.23 Aligned_cols=31 Identities=35% Similarity=0.907 Sum_probs=23.9
Q ss_pred ccceecCC----CCceecCCCCCcccccccccc-ccc
Q psy2284 136 HFCAVCGF----PSNYTCVPCGARYCCVRCLGT-HQD 167 (175)
Q Consensus 136 ~~C~VCG~----~~~YtC~~Cg~ryCS~~C~~~-H~e 167 (175)
..|.||.. .+...|..|+..|| ..|... |..
T Consensus 4 ~~C~~C~~~~~~~av~~C~~C~~~~C-~~Cl~~~h~~ 39 (101)
T 2jun_A 4 VLCQFCDQDPAQDAVKTCVTCEVSYC-DECLKATHPN 39 (101)
T ss_dssp CBCTTCCSSSCCBCCEEETTTTEEEC-HHHHHHHSCS
T ss_pred CCCcCCCCCCCCCceEECCcCChHHh-HHHCHHHhcc
Confidence 57999972 45677999999999 567775 764
No 123
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=31.15 E-value=13 Score=27.21 Aligned_cols=22 Identities=23% Similarity=0.668 Sum_probs=15.6
Q ss_pred cccceecCC---CC--------ceecCCCCCcc
Q psy2284 135 RHFCAVCGF---PS--------NYTCVPCGARY 156 (175)
Q Consensus 135 r~~C~VCG~---~~--------~YtC~~Cg~ry 156 (175)
-.||.-||+ +. .|.|..||-.+
T Consensus 4 m~FCp~Cgn~L~~~~~~~~~~~~~~C~~C~y~~ 36 (113)
T 3h0g_I 4 FQYCIECNNMLYPREDKVDRVLRLACRNCDYSE 36 (113)
T ss_dssp CCCCSSSCCCCEECCCTTTCCCCEECSSSCCEE
T ss_pred ceeCcCCCCEeeEcccCCCCeeEEECCCCCCeE
Confidence 468999992 21 48899998644
No 124
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.10 E-value=30 Score=23.39 Aligned_cols=26 Identities=23% Similarity=0.604 Sum_probs=20.3
Q ss_pred Cccccee--cCCC--CceecCCCCCccccc
Q psy2284 134 NRHFCAV--CGFP--SNYTCVPCGARYCCV 159 (175)
Q Consensus 134 ~r~~C~V--CG~~--~~YtC~~Cg~ryCS~ 159 (175)
.-.-|++ |+.. -.+.|..|+..||..
T Consensus 11 ~~~~Cs~~~Ck~~~ll~f~C~~C~~~FC~~ 40 (63)
T 1x4v_A 11 FTNKCERAGCRQREMMKLTCERCSRNFCIK 40 (63)
T ss_dssp TCCCCCSTTCCCCCSSCCBCSSSCCBCCHH
T ss_pred cCCCCCccCCCCCCccceECCCCCcccCcc
Confidence 3457999 9933 367899999999974
No 125
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=31.08 E-value=12 Score=25.93 Aligned_cols=32 Identities=19% Similarity=0.507 Sum_probs=22.2
Q ss_pred cccceecC--C-------------CCceecCCCCCcccccccccccc
Q psy2284 135 RHFCAVCG--F-------------PSNYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 135 r~~C~VCG--~-------------~~~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
...|.+|| | .-.|.|.-||..|=...=+..|.
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~C~~C~k~f~~~~~l~~H~ 120 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRYTEHTKVCPVCKKEFTSTDSALDHV 120 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHHTCCCCBCTTTCCBCSSHHHHHHHH
T ss_pred CeECCCCCcccCCHhHHHHHHHHCCCCCCCCCCCcccCCHHHHHHHH
Confidence 35788888 3 23588999998887665555553
No 126
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=30.65 E-value=20 Score=27.83 Aligned_cols=31 Identities=35% Similarity=0.761 Sum_probs=23.8
Q ss_pred CcccceecCCC------CceecCCCCCccccccccccc
Q psy2284 134 NRHFCAVCGFP------SNYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 134 ~r~~C~VCG~~------~~YtC~~Cg~ryCS~~C~~~H 165 (175)
..+.|.+|+.+ ..-.|..|..+.|. .|-..+
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~-~C~~~~ 103 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCK-SCSHAH 103 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECG-GGEECC
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhc-cccccc
Confidence 57899999943 35569999999999 776443
No 127
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=30.14 E-value=13 Score=31.99 Aligned_cols=22 Identities=14% Similarity=-0.017 Sum_probs=14.7
Q ss_pred CCHHHHHHHHHHHHHhhhCCCC
Q psy2284 21 LDEATRQRRARKALESLESDNF 42 (175)
Q Consensus 21 lD~~~R~rr~~~rLdaLE~DN~ 42 (175)
-|..+--.+..+||..|.++|.
T Consensus 23 p~~~~lf~~RA~Rl~~LA~~~p 44 (309)
T 2fiy_A 23 QPSRDLFARRGERLLQLAEGHP 44 (309)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHHHHhcCC
Confidence 3555666666677777777766
No 128
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=29.95 E-value=19 Score=25.01 Aligned_cols=9 Identities=22% Similarity=0.604 Sum_probs=4.1
Q ss_pred eecCCCCCc
Q psy2284 147 YTCVPCGAR 155 (175)
Q Consensus 147 YtC~~Cg~r 155 (175)
.+||.|+..
T Consensus 51 ~~CP~Cr~~ 59 (108)
T 2ckl_A 51 KYCPICDVQ 59 (108)
T ss_dssp SBCTTTCCB
T ss_pred CcCcCCCcc
Confidence 345544443
No 129
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=29.83 E-value=17 Score=23.82 Aligned_cols=12 Identities=25% Similarity=0.725 Sum_probs=6.9
Q ss_pred CceecCCCCCcc
Q psy2284 145 SNYTCVPCGARY 156 (175)
Q Consensus 145 ~~YtC~~Cg~ry 156 (175)
+.|.|.+||.-+
T Consensus 2 ~iY~C~rCg~~f 13 (48)
T 4ayb_P 2 AVYRCGKCWKTF 13 (48)
T ss_dssp ---CCCCTTTTC
T ss_pred cEEEeeccCCCc
Confidence 468888888743
No 130
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=29.79 E-value=14 Score=24.67 Aligned_cols=23 Identities=30% Similarity=0.948 Sum_probs=17.8
Q ss_pred ccceecC--CC--CceecCCCCCcccc
Q psy2284 136 HFCAVCG--FP--SNYTCVPCGARYCC 158 (175)
Q Consensus 136 ~~C~VCG--~~--~~YtC~~Cg~ryCS 158 (175)
..|-.|+ +. +.|.|++|+.-||-
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~ 42 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCV 42 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCH
T ss_pred CcccccCcccCCCccEECCccCcCccc
Confidence 4588898 32 15999999999985
No 131
>3gj8_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.82A {Rattus norvegicus} PDB: 3gj4_B*
Probab=29.34 E-value=11 Score=26.62 Aligned_cols=26 Identities=27% Similarity=0.566 Sum_probs=0.0
Q ss_pred CCCCCCcccceecC---CCCceecCCCCC
Q psy2284 129 PSKFPNRHFCAVCG---FPSNYTCVPCGA 154 (175)
Q Consensus 129 ps~~P~r~~C~VCG---~~~~YtC~~Cg~ 154 (175)
|...+.-..|.+|+ |...-+|..|+.
T Consensus 2 ~~~~~g~W~C~~C~~~N~~~~~~C~~C~~ 30 (92)
T 3gj8_B 2 PLGSVGSWECPVCCVSNKAEDSRCVSCTS 30 (92)
T ss_dssp -----------------------------
T ss_pred CCCCCcCCCCCcCCCEeccccceecccCC
Confidence 33456677899999 555777999986
No 132
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.22 E-value=12 Score=19.84 Aligned_cols=21 Identities=19% Similarity=0.325 Sum_probs=13.9
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~ 29 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHM 29 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHH
Confidence 578888888776655554443
No 133
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=28.95 E-value=24 Score=26.19 Aligned_cols=25 Identities=32% Similarity=0.747 Sum_probs=18.6
Q ss_pred cccceecC-CCC----ceecCCCCCccccc
Q psy2284 135 RHFCAVCG-FPS----NYTCVPCGARYCCV 159 (175)
Q Consensus 135 r~~C~VCG-~~~----~YtC~~Cg~ryCS~ 159 (175)
...|.+|+ .++ +.-|..||.-+|+.
T Consensus 69 ~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~ 98 (125)
T 1joc_A 69 VQNCMACGKGFSVTVRRHHCRQCGNIFCAE 98 (125)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGG
T ss_pred CCCCcCcCCccccccccccCCCCCeEEChH
Confidence 34799999 222 46799999999883
No 134
>2dkt_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.89.1.1 g.93.1.1 PDB: 2k2c_A
Probab=28.90 E-value=26 Score=27.30 Aligned_cols=8 Identities=25% Similarity=0.625 Sum_probs=3.9
Q ss_pred cccceecC
Q psy2284 135 RHFCAVCG 142 (175)
Q Consensus 135 r~~C~VCG 142 (175)
..+|.+|+
T Consensus 58 ~vlCg~C~ 65 (143)
T 2dkt_A 58 EVQCINCE 65 (143)
T ss_dssp CEEESSSC
T ss_pred eeeecccC
Confidence 44555554
No 135
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=28.78 E-value=17 Score=24.72 Aligned_cols=22 Identities=14% Similarity=0.066 Sum_probs=14.9
Q ss_pred cccceecCCC-------CceecCCCCCcc
Q psy2284 135 RHFCAVCGFP-------SNYTCVPCGARY 156 (175)
Q Consensus 135 r~~C~VCG~~-------~~YtC~~Cg~ry 156 (175)
.-.|-+|+.+ +...|+.||..|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2jr6_A 8 ILVCPVTKGRLEYHQDKQELWSRQAKLAY 36 (68)
T ss_dssp CCBCSSSCCBCEEETTTTEEEETTTTEEE
T ss_pred heECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 3457777732 556799888877
No 136
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=28.75 E-value=31 Score=23.33 Aligned_cols=28 Identities=11% Similarity=0.124 Sum_probs=16.6
Q ss_pred CCCCcccceecC-CCCceecCCCCCcccc
Q psy2284 131 KFPNRHFCAVCG-FPSNYTCVPCGARYCC 158 (175)
Q Consensus 131 ~~P~r~~C~VCG-~~~~YtC~~Cg~ryCS 158 (175)
..|....|.||+ ....=....||.-||-
T Consensus 10 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~r 38 (85)
T 2kr4_A 10 DAPDEFRDPLMDTLMTDPVRLPSGTVMDR 38 (85)
T ss_dssp TCCTTTBCTTTCSBCSSEEECTTSCEEEH
T ss_pred cCchheECcccCchhcCCeECCCCCEECH
Confidence 356677788888 3333333447777763
No 137
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=28.72 E-value=20 Score=25.41 Aligned_cols=9 Identities=33% Similarity=1.017 Sum_probs=4.8
Q ss_pred ceecCCCCC
Q psy2284 146 NYTCVPCGA 154 (175)
Q Consensus 146 ~YtC~~Cg~ 154 (175)
+|+||.||.
T Consensus 27 ~y~Cp~CG~ 35 (83)
T 1vq8_Z 27 DHACPNCGE 35 (83)
T ss_dssp CEECSSSCC
T ss_pred cCcCCCCCC
Confidence 455555554
No 138
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=28.66 E-value=22 Score=22.66 Aligned_cols=19 Identities=26% Similarity=0.702 Sum_probs=15.4
Q ss_pred ccceecC--CCCceecCCCCC
Q psy2284 136 HFCAVCG--FPSNYTCVPCGA 154 (175)
Q Consensus 136 ~~C~VCG--~~~~YtC~~Cg~ 154 (175)
.+|.+|| .|..|+|.-|+.
T Consensus 15 t~C~~C~k~i~~G~kC~~Ck~ 35 (49)
T 1kbe_A 15 QVCNVCQKSMIFGVKCKHCRL 35 (49)
T ss_dssp CCCSSSCCSSCCEEEETTTTE
T ss_pred cCccccCceeECcCCCCCCCC
Confidence 7899999 566699987765
No 139
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=28.05 E-value=17 Score=24.80 Aligned_cols=20 Identities=15% Similarity=0.441 Sum_probs=14.1
Q ss_pred cceecCC-------CCceecCCCCCcc
Q psy2284 137 FCAVCGF-------PSNYTCVPCGARY 156 (175)
Q Consensus 137 ~C~VCG~-------~~~YtC~~Cg~ry 156 (175)
.|-+|+. .+...|+.||..|
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2hf1_A 10 VCPLCKGPLVFDKSKDELICKGDRLAF 36 (68)
T ss_dssp BCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred ECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 5667763 2556799998877
No 140
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=27.87 E-value=42 Score=22.28 Aligned_cols=26 Identities=27% Similarity=0.802 Sum_probs=13.8
Q ss_pred CCcccceecC--CCCceecCCCCCcccc
Q psy2284 133 PNRHFCAVCG--FPSNYTCVPCGARYCC 158 (175)
Q Consensus 133 P~r~~C~VCG--~~~~YtC~~Cg~ryCS 158 (175)
+.-..|.||. +....+-+.||-.||.
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~ 38 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNSYCD 38 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCEECH
T ss_pred CcCCCCCCCChhhcCceECCCCCCHHHH
Confidence 4445666666 3333444446666664
No 141
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.67 E-value=13 Score=19.66 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=13.5
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|.-||..|-...=+..|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H 28 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAH 28 (36)
T ss_dssp SEECSSSSCEESCHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHH
Confidence 47888888877665544444
No 142
>1ews_A RK-1 defensin, alpha-defisin; alpha defensin, triple-stranded beta-sheet, antimicrobial protein; NMR {Oryctolagus cuniculus} SCOP: g.9.1.1
Probab=27.57 E-value=20 Score=21.25 Aligned_cols=14 Identities=43% Similarity=1.027 Sum_probs=10.9
Q ss_pred cceecC-CCCceecC
Q psy2284 137 FCAVCG-FPSNYTCV 150 (175)
Q Consensus 137 ~C~VCG-~~~~YtC~ 150 (175)
+=+.|| |.++|-|-
T Consensus 15 idgscglfnskyicc 29 (32)
T 1ews_A 15 IDGSCGLFNSKYICC 29 (32)
T ss_dssp EEECCSSSSCSEEEE
T ss_pred eccccccccceeEEe
Confidence 446799 99999983
No 143
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=27.55 E-value=29 Score=26.33 Aligned_cols=31 Identities=23% Similarity=0.675 Sum_probs=23.0
Q ss_pred CcccceecC--C--C--CceecCCCCCccccccccccc
Q psy2284 134 NRHFCAVCG--F--P--SNYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 134 ~r~~C~VCG--~--~--~~YtC~~Cg~ryCS~~C~~~H 165 (175)
....|.+|+ + . ..-.|..|..+.|. .|-..+
T Consensus 54 ~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~-~C~~~~ 90 (134)
T 1zbd_B 54 GVNRCILCGEQLGMLGSASVVCEDCKKNVCT-KCGVET 90 (134)
T ss_dssp SSSBCSSSCCBCSTTSCCEEECTTTCCEEET-TSEEEC
T ss_pred CCccccccCCCcccccCCCCCCCCCCccccc-ccCCcc
Confidence 457899999 3 1 24569999999999 476554
No 144
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=27.09 E-value=33 Score=23.10 Aligned_cols=24 Identities=21% Similarity=0.632 Sum_probs=17.6
Q ss_pred CCCCcccceecC---CCCceecCCCCC
Q psy2284 131 KFPNRHFCAVCG---FPSNYTCVPCGA 154 (175)
Q Consensus 131 ~~P~r~~C~VCG---~~~~YtC~~Cg~ 154 (175)
.+....||..|| +...|.|..||.
T Consensus 31 ~~~~pt~C~~C~~~l~~qG~kC~~C~~ 57 (72)
T 2fnf_X 31 LRGGPGWCDLCGREVLRQALRCANCKF 57 (72)
T ss_dssp CCSSCCBCTTTSSBCSSCCEECTTSSC
T ss_pred cCCCCcchhhhhHHHHhCcCccCCCCC
Confidence 456678999999 224688988775
No 145
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=27.01 E-value=34 Score=22.02 Aligned_cols=24 Identities=21% Similarity=0.632 Sum_probs=17.8
Q ss_pred CCCCcccceecC---CCCceecCCCCC
Q psy2284 131 KFPNRHFCAVCG---FPSNYTCVPCGA 154 (175)
Q Consensus 131 ~~P~r~~C~VCG---~~~~YtC~~Cg~ 154 (175)
++....+|..|| +.-.|.|..|+.
T Consensus 18 ~~~~pt~C~~C~~~i~kqg~kC~~C~~ 44 (59)
T 1rfh_A 18 LRGGPGWCDLCGREVLRQALRCANCKF 44 (59)
T ss_dssp CSSCCEECTTTCSEECSCCEECTTTSC
T ss_pred ccCCCeEchhcchhhhhCccEeCCCCC
Confidence 456678999999 334688988775
No 146
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=26.68 E-value=16 Score=20.61 Aligned_cols=21 Identities=33% Similarity=0.746 Sum_probs=15.1
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQ 32 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHG
T ss_pred CCCCCCCCcccCCHHHHHHHH
Confidence 478888888887766655554
No 147
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=26.53 E-value=9 Score=22.43 Aligned_cols=26 Identities=31% Similarity=0.809 Sum_probs=19.0
Q ss_pred ceecCCCCCccccccccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQDTRCL 171 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~etRC~ 171 (175)
.|.|..||..|-...-+..|.-..|.
T Consensus 8 p~~C~~CgK~F~~~s~L~~H~py~C~ 33 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPSTLEAHQAYYCS 33 (36)
T ss_dssp CCEETTTTEECSCHHHHHHHHHHTST
T ss_pred CeECCCCCCccCCHhHccCcCCeECc
Confidence 58888888888777777777654453
No 148
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=26.50 E-value=21 Score=24.35 Aligned_cols=20 Identities=25% Similarity=0.619 Sum_probs=13.8
Q ss_pred cceecCCC-------CceecCCCCCcc
Q psy2284 137 FCAVCGFP-------SNYTCVPCGARY 156 (175)
Q Consensus 137 ~C~VCG~~-------~~YtC~~Cg~ry 156 (175)
.|-+|+.. +...|+.||..|
T Consensus 10 ~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (69)
T 2pk7_A 10 ACPICKGPLKLSADKTELISKGAGLAY 36 (69)
T ss_dssp CCTTTCCCCEECTTSSEEEETTTTEEE
T ss_pred eCCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 46666632 556799998877
No 149
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=26.21 E-value=22 Score=26.53 Aligned_cols=24 Identities=25% Similarity=0.736 Sum_probs=11.7
Q ss_pred CcccceecC--CCCceecCCCCCccc
Q psy2284 134 NRHFCAVCG--FPSNYTCVPCGARYC 157 (175)
Q Consensus 134 ~r~~C~VCG--~~~~YtC~~Cg~ryC 157 (175)
....|.||. +....+++.||-.||
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC 78 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFC 78 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEE
T ss_pred CCCCCcccChHhhCcCEeCCCCChhH
Confidence 334566665 333334445555554
No 150
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.13 E-value=16 Score=19.36 Aligned_cols=20 Identities=20% Similarity=0.306 Sum_probs=13.2
Q ss_pred ceecCCCCCccccc-cccccc
Q psy2284 146 NYTCVPCGARYCCV-RCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~-~C~~~H 165 (175)
.|.|.-||..|-.. .=+..|
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H 29 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRH 29 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHH
Confidence 47888888877665 444444
No 151
>2uzg_A Ubiquitin carboxyl-terminal hydrolase 33; UBL conjugation pathway, DE-ubiquitination, alternative splicing, metal-binding, thiol protease; NMR {Homo sapiens} SCOP: g.44.1.5
Probab=26.02 E-value=27 Score=24.91 Aligned_cols=26 Identities=23% Similarity=0.548 Sum_probs=20.9
Q ss_pred CcccceecC-CCCc-eecCC--CCCccccc
Q psy2284 134 NRHFCAVCG-FPSN-YTCVP--CGARYCCV 159 (175)
Q Consensus 134 ~r~~C~VCG-~~~~-YtC~~--Cg~ryCS~ 159 (175)
....|++|+ ...+ |.|.. ||.-.|+.
T Consensus 24 ~~~~C~~C~~~~~~lw~CL~~~Cg~vgCgr 53 (97)
T 2uzg_A 24 SLGTCQDCKVQGPNLWACLENRCSYVGCGE 53 (97)
T ss_dssp TTTCCSSSCCCCSSCEEECCTTCCCEECCT
T ss_pred CCCcCcCcCCCCCCceeeecccCCCcccCC
Confidence 345799999 5545 99999 99999975
No 152
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.74 E-value=11 Score=20.03 Aligned_cols=20 Identities=25% Similarity=0.665 Sum_probs=13.0
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|..||..|-...=+..|
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H 28 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSH 28 (37)
T ss_dssp CCEETTTTEECSSHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHHH
Confidence 47888888877665444444
No 153
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=25.64 E-value=30 Score=23.64 Aligned_cols=24 Identities=29% Similarity=0.706 Sum_probs=17.9
Q ss_pred ccceecC-CCC----ceecCCCCCccccc
Q psy2284 136 HFCAVCG-FPS----NYTCVPCGARYCCV 159 (175)
Q Consensus 136 ~~C~VCG-~~~----~YtC~~Cg~ryCS~ 159 (175)
..|.+|+ .++ +.-|..||.-+|+.
T Consensus 20 ~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~ 48 (82)
T 2yw8_A 20 THCRQCEKEFSISRRKHHCRNCGHIFCNT 48 (82)
T ss_dssp CBCTTTCCBCBTTBCCEECTTTCCEECSG
T ss_pred CcccCcCCcccCccccccCCCCCCEEChH
Confidence 4688998 232 56699999999874
No 154
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.61 E-value=38 Score=22.42 Aligned_cols=29 Identities=24% Similarity=0.588 Sum_probs=21.9
Q ss_pred ccceecCCC----CceecCCCCCcccccccccc
Q psy2284 136 HFCAVCGFP----SNYTCVPCGARYCCVRCLGT 164 (175)
Q Consensus 136 ~~C~VCG~~----~~YtC~~Cg~ryCS~~C~~~ 164 (175)
..|.+|+.. -.|+|..|....-...|+..
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~ 44 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWR 44 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHH
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhC
Confidence 789999932 37999999887666677654
No 155
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=25.24 E-value=31 Score=21.21 Aligned_cols=20 Identities=25% Similarity=0.624 Sum_probs=14.2
Q ss_pred cceecCCCC----ceecCCCCCcc
Q psy2284 137 FCAVCGFPS----NYTCVPCGARY 156 (175)
Q Consensus 137 ~C~VCG~~~----~YtC~~Cg~ry 156 (175)
+|.|||..+ -.-|-.|...|
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~ 25 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAF 25 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEE
T ss_pred CCCCCCCCCCCCCEEECCCCChhh
Confidence 589999665 35588887654
No 156
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.24 E-value=18 Score=20.10 Aligned_cols=21 Identities=33% Similarity=0.635 Sum_probs=15.4
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQ 32 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHG
T ss_pred CeECCCCCCccCCHHHHHHHH
Confidence 588999998887766555554
No 157
>2olm_A Nucleoporin-like protein RIP; arfgap, GTPase-activating protein, REV-interacting protein, human immunodeficiency virus, AIDS, structural genomics; 1.48A {Homo sapiens} PDB: 2d9l_A
Probab=25.19 E-value=17 Score=27.94 Aligned_cols=35 Identities=23% Similarity=0.591 Sum_probs=25.3
Q ss_pred CCCcccceecC-CCCceecCCCCCccccccccccccc
Q psy2284 132 FPNRHFCAVCG-FPSNYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 132 ~P~r~~C~VCG-~~~~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
.|.-..|.-|| ....+.+..-|...| +.|-.+|..
T Consensus 22 ~p~N~~CaDCg~~~P~WaS~n~GvfiC-~~CsgiHR~ 57 (140)
T 2olm_A 22 LPHNRKCFDCDQRGPTYVNMTVGSFVC-TSCSGSLRG 57 (140)
T ss_dssp SGGGGSCTTTCSSCCCEEETTTTEEEC-HHHHHHHTT
T ss_pred CcCCCcCCCCCCCCCCceeeccCEEEc-hhccchhcc
Confidence 34556899999 444777888788775 678888875
No 158
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=25.18 E-value=15 Score=20.54 Aligned_cols=21 Identities=29% Similarity=0.627 Sum_probs=15.2
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|.-||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~ 32 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHE 32 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHH
T ss_pred CeECCCCCcccCchHHHHHHH
Confidence 588888888887766555554
No 159
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=25.05 E-value=16 Score=21.28 Aligned_cols=21 Identities=38% Similarity=0.651 Sum_probs=14.5
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~ 27 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHY 27 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHH
T ss_pred CEECCCcCcccCCHHHHHHHh
Confidence 588888888887655555443
No 160
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=24.98 E-value=32 Score=30.29 Aligned_cols=36 Identities=28% Similarity=0.694 Sum_probs=22.9
Q ss_pred CCcccccc-CCCCCCCcccceecC--CCC----ceecCCCCCc
Q psy2284 120 SAYENAEA-KPSKFPNRHFCAVCG--FPS----NYTCVPCGAR 155 (175)
Q Consensus 120 p~Y~~a~a-~ps~~P~r~~C~VCG--~~~----~YtC~~Cg~r 155 (175)
|++..... ..-++....+|..|| -|| .|.|..||..
T Consensus 204 ~niv~~h~f~~~~~~~pt~C~~C~~~l~g~~~qg~~C~~C~~~ 246 (463)
T 3cxl_A 204 PKYEKIHNFKVHTFRGPHWCEYCANFMWGLIAQGVKCADCGLN 246 (463)
T ss_dssp ---CBCCCEEEECCSSCCBCTTTCCBCCSSSCCEEEETTTCCE
T ss_pred cccCCCcceEEeecCCCCcchhhhhhhhhHHhcCeeccccCcc
Confidence 44444332 234566778999999 565 5889999884
No 161
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=24.83 E-value=17 Score=19.75 Aligned_cols=21 Identities=33% Similarity=0.757 Sum_probs=14.7
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|.-||..|-+..-+..|.
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~ 26 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHM 26 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHH
T ss_pred ceECCCCCcccCCHHHHHHHH
Confidence 588888888877665555553
No 162
>3r24_B Non-structural protein 10 and non-structural PROT; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus} PDB: 2g9t_A 2ga6_A
Probab=24.65 E-value=17 Score=28.71 Aligned_cols=15 Identities=40% Similarity=1.059 Sum_probs=13.3
Q ss_pred ccceecCCCCceecC
Q psy2284 136 HFCAVCGFPSNYTCV 150 (175)
Q Consensus 136 ~~C~VCG~~~~YtC~ 150 (175)
..|.|||+|-.|.|.
T Consensus 118 ~vC~VC~~W~~~gC~ 132 (155)
T 3r24_B 118 TVCTVCGMWKGYGCS 132 (155)
T ss_dssp CBCTTTCSBTTTTCC
T ss_pred CcccccccEecCCcc
Confidence 369999999999995
No 163
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=24.61 E-value=17 Score=28.60 Aligned_cols=25 Identities=20% Similarity=0.476 Sum_probs=21.4
Q ss_pred CCCCcccceecC--CCCceecCCCCCc
Q psy2284 131 KFPNRHFCAVCG--FPSNYTCVPCGAR 155 (175)
Q Consensus 131 ~~P~r~~C~VCG--~~~~YtC~~Cg~r 155 (175)
+.-.|..|..|| |.-.|.+|.||.+
T Consensus 120 Rl~~R~~~~~~g~~y~~~~~pp~~g~~ 146 (206)
T 3sr0_A 120 RLSGRRINPETGEVYHVKYNPPPPGVK 146 (206)
T ss_dssp HHHTEEECTTTCCEEETTTBCCCTTCC
T ss_pred HHhCCccccCCCceeeeeccCCCCCce
Confidence 457889999999 8889999999875
No 164
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=24.56 E-value=55 Score=22.75 Aligned_cols=21 Identities=33% Similarity=0.735 Sum_probs=11.8
Q ss_pred cccceecCCC-------CceecCCCCCc
Q psy2284 135 RHFCAVCGFP-------SNYTCVPCGAR 155 (175)
Q Consensus 135 r~~C~VCG~~-------~~YtC~~Cg~r 155 (175)
.+.|..||.. |...|.+||.-
T Consensus 26 ky~C~fCgk~~vkR~a~GIW~C~~C~~~ 53 (72)
T 3jyw_9 26 RYDCSFCGKKTVKRGAAGIWTCSCCKKT 53 (72)
T ss_dssp CBCCSSCCSSCBSBCSSSCBCCSSSCCC
T ss_pred CccCCCCCCceeEecCCCeEECCCCCCE
Confidence 3467777733 23456666653
No 165
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=24.54 E-value=16 Score=20.01 Aligned_cols=21 Identities=33% Similarity=0.640 Sum_probs=15.0
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~ 30 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQ 30 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHH
Confidence 588888888887766555554
No 166
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=24.44 E-value=35 Score=21.99 Aligned_cols=29 Identities=24% Similarity=0.611 Sum_probs=19.6
Q ss_pred cccceecCCC-----C-ceecCCCCCcccccccccc
Q psy2284 135 RHFCAVCGFP-----S-NYTCVPCGARYCCVRCLGT 164 (175)
Q Consensus 135 r~~C~VCG~~-----~-~YtC~~Cg~ryCS~~C~~~ 164 (175)
-.+|.|||.. + -.-|-.|...| =..|+..
T Consensus 6 ~~~C~vC~~~~~~~~~~ll~Cd~C~~~~-H~~C~~p 40 (66)
T 2yt5_A 6 SGVCTICQEEYSEAPNEMVICDKCGQGY-HQLCHTP 40 (66)
T ss_dssp CCCBSSSCCCCCBTTBCEEECSSSCCEE-ETTTSSS
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCChHH-HhhhCCC
Confidence 4689999944 3 44599998876 3455554
No 167
>2fyg_A Replicase polyprotein 1AB; SARS virus polyprotein non-structural protein NSP10, zinc FI viral protein; 1.80A {Sars coronavirus} SCOP: g.86.1.1 PDB: 2xyq_B* 2xyr_B* 2xyv_B*
Probab=24.42 E-value=21 Score=27.47 Aligned_cols=15 Identities=40% Similarity=1.059 Sum_probs=13.2
Q ss_pred ccceecCCCCceecC
Q psy2284 136 HFCAVCGFPSNYTCV 150 (175)
Q Consensus 136 ~~C~VCG~~~~YtC~ 150 (175)
..|.|||.|-.|-|.
T Consensus 111 ~vC~VC~~W~~~gC~ 125 (128)
T 2fyg_A 111 TVCTVCGMWKGYGCS 125 (128)
T ss_dssp CBCTTTCSBTTBBCC
T ss_pred CccceeceeecCCcc
Confidence 469999999999995
No 168
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.37 E-value=18 Score=20.03 Aligned_cols=21 Identities=19% Similarity=0.502 Sum_probs=15.4
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHE 32 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHH
T ss_pred CeECCCCCchhCCHHHHHHHh
Confidence 588999998887766655554
No 169
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=24.27 E-value=58 Score=20.96 Aligned_cols=32 Identities=28% Similarity=0.831 Sum_probs=19.2
Q ss_pred CCCcccceecC--CCCceecCCCCCcccccccccc
Q psy2284 132 FPNRHFCAVCG--FPSNYTCVPCGARYCCVRCLGT 164 (175)
Q Consensus 132 ~P~r~~C~VCG--~~~~YtC~~Cg~ryCS~~C~~~ 164 (175)
.+....|.||. +...+.-+.||-.||. .|...
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC~-~Ci~~ 45 (74)
T 2yur_A 12 IPDELLCLICKDIMTDAVVIPCCGNSYCD-ECIRT 45 (74)
T ss_dssp SCGGGSCSSSCCCCTTCEECSSSCCEECT-THHHH
T ss_pred CCCCCCCcCCChHHhCCeEcCCCCCHHHH-HHHHH
Confidence 45556788887 4444554448888875 35433
No 170
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=24.01 E-value=17 Score=20.41 Aligned_cols=21 Identities=29% Similarity=0.604 Sum_probs=14.8
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~ 32 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHR 32 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHH
Confidence 478888888877766555553
No 171
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.94 E-value=17 Score=19.79 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=14.2
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~ 30 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQ 30 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHH
Confidence 478888888776655555553
No 172
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.89 E-value=19 Score=19.60 Aligned_cols=22 Identities=27% Similarity=0.597 Sum_probs=15.6
Q ss_pred ceecCCCCCccccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
.|.|.-||..|-...-+..|..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~ 31 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHER 31 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGG
T ss_pred CeECCCCCCCcCCHHHHHHHHH
Confidence 5888888888877666555543
No 173
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=23.86 E-value=31 Score=25.19 Aligned_cols=22 Identities=32% Similarity=0.685 Sum_probs=14.4
Q ss_pred cccceecCCC-------CceecCCCCCcc
Q psy2284 135 RHFCAVCGFP-------SNYTCVPCGARY 156 (175)
Q Consensus 135 r~~C~VCG~~-------~~YtC~~Cg~ry 156 (175)
.+.|+.||.. |...|.+||.-+
T Consensus 36 ky~CpfCgk~~vkR~a~GIW~C~~C~~~~ 64 (92)
T 3izc_m 36 RYDCSFCGKKTVKRGAAGIWTCSCCKKTV 64 (92)
T ss_dssp CCCCSSSCSSCCEEEETTEEECTTTCCEE
T ss_pred CCcCCCCCCceeeecccceEEcCCCCCEE
Confidence 4568888843 345688887643
No 174
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.78 E-value=18 Score=19.73 Aligned_cols=21 Identities=43% Similarity=0.860 Sum_probs=15.1
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~ 31 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHV 31 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHT
T ss_pred CEeCCCcChhhCCHHHHHHHH
Confidence 588888988887766555553
No 175
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=23.78 E-value=36 Score=23.78 Aligned_cols=25 Identities=32% Similarity=0.833 Sum_probs=18.5
Q ss_pred cccceecC--CC---CceecCCCCCccccc
Q psy2284 135 RHFCAVCG--FP---SNYTCVPCGARYCCV 159 (175)
Q Consensus 135 r~~C~VCG--~~---~~YtC~~Cg~ryCS~ 159 (175)
...|.+|+ |. -++-|..||.-+|+.
T Consensus 20 ~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~ 49 (90)
T 3t7l_A 20 APNCMNCQVKFTFTKRRHHCRACGKVFCGV 49 (90)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGG
T ss_pred CCcCcCCCCcccchhhCccccCCCCEECCc
Confidence 34688998 22 267799999998875
No 176
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.54 E-value=26 Score=21.39 Aligned_cols=28 Identities=21% Similarity=0.360 Sum_probs=21.4
Q ss_pred ceecC-CCCCccccccccccccccccccc
Q psy2284 146 NYTCV-PCGARYCCVRCLGTHQDTRCLKW 173 (175)
Q Consensus 146 ~YtC~-~Cg~ryCS~~C~~~H~etRC~K~ 173 (175)
.|.|. .||..|-...=+..|..+-|.+-
T Consensus 36 p~~C~~~C~k~f~~~~~L~~H~~~hc~~~ 64 (66)
T 2eod_A 36 PVACPNQCGVGTVAREDLPGHLKDSCNTA 64 (66)
T ss_dssp EEECTTCCSCCEEETTTHHHHHHTTSSSC
T ss_pred CccCCcccCcccccHHHHHHHHHhhcccC
Confidence 58898 89988877777778877767653
No 177
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.37 E-value=20 Score=19.64 Aligned_cols=21 Identities=33% Similarity=0.803 Sum_probs=14.7
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|.-||..|-...=+..|.
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~ 31 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHL 31 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHT
T ss_pred CEECCCCCCccCCHHHHHHHH
Confidence 578888888877665555554
No 178
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=23.18 E-value=23 Score=24.19 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=15.2
Q ss_pred cccceecCC-------CCceecCCCCCcc
Q psy2284 135 RHFCAVCGF-------PSNYTCVPCGARY 156 (175)
Q Consensus 135 r~~C~VCG~-------~~~YtC~~Cg~ry 156 (175)
.-.|-+|+. .+...|+.||..|
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (70)
T 2js4_A 8 ILVCPVCKGRLEFQRAQAELVCNADRLAF 36 (70)
T ss_dssp CCBCTTTCCBEEEETTTTEEEETTTTEEE
T ss_pred heECCCCCCcCEEeCCCCEEEcCCCCcee
Confidence 345777763 3566799998877
No 179
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=23.02 E-value=23 Score=19.87 Aligned_cols=21 Identities=29% Similarity=0.573 Sum_probs=14.7
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~ 32 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQ 32 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHG
T ss_pred CcCCCCcCchhCCHHHHHHHH
Confidence 578888888877766555554
No 180
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=22.87 E-value=37 Score=22.23 Aligned_cols=29 Identities=31% Similarity=0.679 Sum_probs=18.7
Q ss_pred CcccceecCCCCc-eecCCCCCccccccccc
Q psy2284 134 NRHFCAVCGFPSN-YTCVPCGARYCCVRCLG 163 (175)
Q Consensus 134 ~r~~C~VCG~~~~-YtC~~Cg~ryCS~~C~~ 163 (175)
.-.+|.||+..+. .-|-.|...| =+.|+.
T Consensus 7 ~~~~C~vC~~~g~ll~CD~C~~~f-H~~Cl~ 36 (66)
T 1xwh_A 7 NEDECAVCRDGGELICCDGCPRAF-HLACLS 36 (66)
T ss_dssp CCCSBSSSSCCSSCEECSSCCCEE-CTTTSS
T ss_pred CCCCCccCCCCCCEEEcCCCChhh-cccccC
Confidence 3458999996664 4488887655 234544
No 181
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=22.70 E-value=36 Score=22.07 Aligned_cols=23 Identities=30% Similarity=0.765 Sum_probs=15.7
Q ss_pred CcccceecCCCCcee-cCCCCCcc
Q psy2284 134 NRHFCAVCGFPSNYT-CVPCGARY 156 (175)
Q Consensus 134 ~r~~C~VCG~~~~Yt-C~~Cg~ry 156 (175)
.-.+|.|||..+..- |-.|..-|
T Consensus 8 ~~~~C~vC~~~g~ll~Cd~C~~~f 31 (61)
T 1mm2_A 8 HMEFCRVCKDGGELLCCDTCPSSY 31 (61)
T ss_dssp SCSSCTTTCCCSSCBCCSSSCCCB
T ss_pred CCCcCCCCCCCCCEEEcCCCCHHH
Confidence 456799999666443 87776654
No 182
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=22.52 E-value=25 Score=26.67 Aligned_cols=22 Identities=27% Similarity=0.791 Sum_probs=13.5
Q ss_pred cccceecCCCC-------ceecCCCCCcc
Q psy2284 135 RHFCAVCGFPS-------NYTCVPCGARY 156 (175)
Q Consensus 135 r~~C~VCG~~~-------~YtC~~Cg~ry 156 (175)
.+.|..||... ...|..||.-+
T Consensus 60 kytCPfCGk~~vKR~avGIW~C~~Cgk~f 88 (116)
T 3cc2_Z 60 DHACPNCGEDRVDRQGTGIWQCSYCDYKF 88 (116)
T ss_dssp CEECSSSCCEEEEEEETTEEEETTTCCEE
T ss_pred CCcCCCCCCceeEecCceeEECCCCCCEE
Confidence 45777787532 34577776643
No 183
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.33 E-value=21 Score=20.10 Aligned_cols=21 Identities=29% Similarity=0.645 Sum_probs=14.3
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHH 32 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHT
T ss_pred ccCCCCCCcccCcHHHHHHHH
Confidence 477888888776665555554
No 184
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=22.32 E-value=27 Score=24.35 Aligned_cols=13 Identities=46% Similarity=1.162 Sum_probs=8.4
Q ss_pred CCcccceecCCCC
Q psy2284 133 PNRHFCAVCGFPS 145 (175)
Q Consensus 133 P~r~~C~VCG~~~ 145 (175)
+..+.|+.||...
T Consensus 25 ~~ky~C~fCgk~~ 37 (73)
T 1ffk_W 25 KKKYKCPVCGFPK 37 (73)
T ss_pred ccCccCCCCCCce
Confidence 3456777787664
No 185
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.25 E-value=37 Score=21.48 Aligned_cols=30 Identities=30% Similarity=0.812 Sum_probs=19.0
Q ss_pred CCcccceecCCCCc-eecCCCCCccccccccc
Q psy2284 133 PNRHFCAVCGFPSN-YTCVPCGARYCCVRCLG 163 (175)
Q Consensus 133 P~r~~C~VCG~~~~-YtC~~Cg~ryCS~~C~~ 163 (175)
..-.+|.||+..+. ..|-.|...|= +.|+.
T Consensus 7 ~~~~~C~vC~~~g~ll~Cd~C~~~~H-~~Cl~ 37 (56)
T 2yql_A 7 GHEDFCSVCRKSGQLLMCDTCSRVYH-LDCLD 37 (56)
T ss_dssp SSCCSCSSSCCSSCCEECSSSSCEEC-SSSSS
T ss_pred CCCCCCccCCCCCeEEEcCCCCcceE-CccCC
Confidence 34568999996664 44888875542 24444
No 186
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.25 E-value=22 Score=19.89 Aligned_cols=20 Identities=25% Similarity=0.620 Sum_probs=14.2
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|.-||..|-...=+..|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H 31 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKH 31 (46)
T ss_dssp SEECSSSCCEESSSHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHH
Confidence 48888888888766555554
No 187
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.12 E-value=15 Score=20.69 Aligned_cols=21 Identities=29% Similarity=0.675 Sum_probs=15.3
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|.-||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHL 32 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHH
T ss_pred CeECcccChhhCCHHHHHHHH
Confidence 588999998887766655553
No 188
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=22.11 E-value=18 Score=20.99 Aligned_cols=24 Identities=21% Similarity=0.342 Sum_probs=16.1
Q ss_pred CCceecCCCCCccccccccccccc
Q psy2284 144 PSNYTCVPCGARYCCVRCLGTHQD 167 (175)
Q Consensus 144 ~~~YtC~~Cg~ryCS~~C~~~H~e 167 (175)
+++++|+.|...-=+.+=++.|-|
T Consensus 1 ~~k~~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 1 SSDFCCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp CCCEECTTSSCEESSHHHHHHHHH
T ss_pred CCcccCccccccCcChHHHHHHHH
Confidence 357888888877666655555544
No 189
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=22.10 E-value=22 Score=19.81 Aligned_cols=21 Identities=29% Similarity=0.678 Sum_probs=14.8
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHR 32 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHG
T ss_pred CEECCCCChhhCChHHHHHHH
Confidence 588888888887665555553
No 190
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.83 E-value=20 Score=19.67 Aligned_cols=21 Identities=29% Similarity=0.531 Sum_probs=14.8
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQ 32 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHH
T ss_pred CeECCCCCcccCCHhHHHHHH
Confidence 588888888887665555553
No 191
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.78 E-value=20 Score=20.06 Aligned_cols=21 Identities=29% Similarity=0.580 Sum_probs=14.3
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQ 32 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHH
T ss_pred CEECCccCcccCCHHHHHHHH
Confidence 478888888776665555553
No 192
>2han_A Protein ultraspiracle; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2
Probab=21.72 E-value=7.4 Score=27.98 Aligned_cols=22 Identities=32% Similarity=0.981 Sum_probs=13.2
Q ss_pred CCcccceecCCC------CceecCCCCC
Q psy2284 133 PNRHFCAVCGFP------SNYTCVPCGA 154 (175)
Q Consensus 133 P~r~~C~VCG~~------~~YtC~~Cg~ 154 (175)
+....|.|||.. |-++|-.|..
T Consensus 8 ~~~~~C~VCgd~a~g~hyGv~sC~aCk~ 35 (93)
T 2han_A 8 GSKHLCSICGDRASGKHYGVYSCEGCKG 35 (93)
T ss_dssp --CCBCTTTCSBCCEEETTEEECHHHHH
T ss_pred CCCCCCcEeCCCCcCeecCcchhHHHHH
Confidence 445789999943 3455766643
No 193
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.71 E-value=18 Score=20.24 Aligned_cols=21 Identities=33% Similarity=0.672 Sum_probs=14.1
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQ 32 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHH
T ss_pred CcCCCCCCchhCCHHHHHHHH
Confidence 477888888776665555553
No 194
>4hn5_A Glucocorticoid receptor; glucocorticoid receptor, steroid receptors, NGRE, repre transcription; HET: DNA; 1.90A {Homo sapiens} PDB: 4hn6_A*
Probab=21.62 E-value=7.4 Score=29.27 Aligned_cols=22 Identities=27% Similarity=0.640 Sum_probs=13.3
Q ss_pred CCcccceecCCCC------ceecCCCCC
Q psy2284 133 PNRHFCAVCGFPS------NYTCVPCGA 154 (175)
Q Consensus 133 P~r~~C~VCG~~~------~YtC~~Cg~ 154 (175)
++...|.|||..+ -++|..|..
T Consensus 27 ~~~~~C~VCgd~a~G~HyGv~sC~aCk~ 54 (117)
T 4hn5_A 27 APPKLCLVCSDEASGCHYGVLTCGSCKV 54 (117)
T ss_dssp ---CBCTTTCSBCCEEETTEEECHHHHH
T ss_pred CCCCcCCcCCCcCcccccCCcccchhhh
Confidence 3456799999433 456888843
No 195
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=21.59 E-value=30 Score=22.97 Aligned_cols=12 Identities=25% Similarity=0.672 Sum_probs=7.2
Q ss_pred eecCCCCCcccc
Q psy2284 147 YTCVPCGARYCC 158 (175)
Q Consensus 147 YtC~~Cg~ryCS 158 (175)
|.|..||..|-.
T Consensus 43 ~~C~~C~~~f~~ 54 (107)
T 1wjp_A 43 AVCPYCSLRFFS 54 (107)
T ss_dssp BCCTTTCCCBSS
T ss_pred ccCCCCCCccCC
Confidence 566666665544
No 196
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.46 E-value=20 Score=20.12 Aligned_cols=21 Identities=38% Similarity=0.722 Sum_probs=14.2
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...-+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQ 32 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHH
Confidence 478888888877665555543
No 197
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=21.42 E-value=21 Score=19.42 Aligned_cols=21 Identities=33% Similarity=0.692 Sum_probs=14.4
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~ 31 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQ 31 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHh
Confidence 588888888876655555543
No 198
>1jjd_A Metallothionein, SMTA; zinc finger, zinc cluster, metal binding PR; NMR {Synechococcus elongatus} SCOP: g.46.1.1
Probab=21.41 E-value=17 Score=24.14 Aligned_cols=16 Identities=31% Similarity=0.725 Sum_probs=13.4
Q ss_pred CCcccccccccccccc
Q psy2284 153 GARYCCVRCLGTHQDT 168 (175)
Q Consensus 153 g~ryCS~~C~~~H~et 168 (175)
|..|||..|..-|...
T Consensus 27 GK~YCSe~Ca~gH~~~ 42 (55)
T 1jjd_A 27 GLYYCSEACADGHTGG 42 (55)
T ss_dssp SCEESSHHHHHTSCSS
T ss_pred CeEEehHHHHccCCCC
Confidence 5689999999999763
No 199
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=21.36 E-value=59 Score=22.68 Aligned_cols=28 Identities=25% Similarity=0.568 Sum_probs=19.7
Q ss_pred CCCcccceecC-CCC----ceecCCCCCccccc
Q psy2284 132 FPNRHFCAVCG-FPS----NYTCVPCGARYCCV 159 (175)
Q Consensus 132 ~P~r~~C~VCG-~~~----~YtC~~Cg~ryCS~ 159 (175)
.-....|.+|+ .++ +.-|..||.-+|+.
T Consensus 6 ~~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~ 38 (88)
T 1wfk_A 6 SGMESRCYGCAVKFTLFKKEYGCKNCGRAFCNG 38 (88)
T ss_dssp CCCCSBCTTTCCBCCSSSCEEECSSSCCEEETT
T ss_pred CCcCCCCcCcCCcccCccccccCCCCCCEEChh
Confidence 34455799998 222 45699999998874
No 200
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.35 E-value=22 Score=19.67 Aligned_cols=21 Identities=33% Similarity=0.754 Sum_probs=15.0
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~ 32 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQ 32 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTH
T ss_pred CeECcccCcccCCHHHHHHHH
Confidence 588888888887766555554
No 201
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=21.29 E-value=34 Score=24.12 Aligned_cols=27 Identities=11% Similarity=0.151 Sum_probs=15.0
Q ss_pred CCCCcccceecC-CCCceecCCCCCccc
Q psy2284 131 KFPNRHFCAVCG-FPSNYTCVPCGARYC 157 (175)
Q Consensus 131 ~~P~r~~C~VCG-~~~~YtC~~Cg~ryC 157 (175)
..|....|.||+ ....=....||.-||
T Consensus 25 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~ 52 (100)
T 2kre_A 25 DAPDEFRDPLMDTLMTDPVRLPSGTIMD 52 (100)
T ss_dssp SCSTTTBCTTTCSBCSSEEEETTTEEEE
T ss_pred cCcHhhCCcCccCcccCCeECCCCCEEc
Confidence 346666777777 333222333777666
No 202
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.27 E-value=21 Score=20.05 Aligned_cols=20 Identities=30% Similarity=0.674 Sum_probs=14.5
Q ss_pred ceecCCCCCccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTH 165 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H 165 (175)
.|.|..||..|-...=+..|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H 31 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIH 31 (46)
T ss_dssp CEECSSSCCEESSHHHHHHH
T ss_pred CEECcccCCccCCHhHHHHH
Confidence 58888898888776555555
No 203
>2han_B Ecdysone receptor; transcription regulation, transcription factor, DNA-binding, nuclear protein, nuclear receptor, zinc finger; 1.95A {Drosophila melanogaster} SCOP: g.39.1.2 PDB: 1r0o_B 1r0n_B
Probab=21.24 E-value=9.2 Score=28.65 Aligned_cols=22 Identities=32% Similarity=0.759 Sum_probs=13.9
Q ss_pred CCcccceecCCC------CceecCCCCC
Q psy2284 133 PNRHFCAVCGFP------SNYTCVPCGA 154 (175)
Q Consensus 133 P~r~~C~VCG~~------~~YtC~~Cg~ 154 (175)
.....|.|||.. |-++|-.|..
T Consensus 6 ~~~~~C~VCg~~a~g~hyGv~sC~aCk~ 33 (119)
T 2han_B 6 VQEELCLVCGDRASGYHYNALTCEGCKG 33 (119)
T ss_dssp CCSCBCTTTCSBCCEEETTEEECHHHHH
T ss_pred CCCCcCeEeCCcCCcceECchhHHhhHH
Confidence 345689999943 3445766643
No 204
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=21.23 E-value=39 Score=26.79 Aligned_cols=27 Identities=15% Similarity=0.207 Sum_probs=14.3
Q ss_pred CCCCcccceecC-CCCceecCCCCCccc
Q psy2284 131 KFPNRHFCAVCG-FPSNYTCVPCGARYC 157 (175)
Q Consensus 131 ~~P~r~~C~VCG-~~~~YtC~~Cg~ryC 157 (175)
..|...+|.||+ ....--...||.-||
T Consensus 102 ~ip~~f~CPI~~elm~DPV~~~~Ghtfe 129 (179)
T 2f42_A 102 EIPDYLCGKISFELMREPCITPSGITYD 129 (179)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEE
T ss_pred CCcHhhcccCccccCCCCeECCCCCEEC
Confidence 345666677776 333333335666554
No 205
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=21.03 E-value=33 Score=19.08 Aligned_cols=21 Identities=33% Similarity=0.626 Sum_probs=15.2
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|.-||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQ 32 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTG
T ss_pred CeECCCCCcccCCHHHHHHHH
Confidence 588888988887766555554
No 206
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.84 E-value=32 Score=24.63 Aligned_cols=11 Identities=36% Similarity=0.890 Sum_probs=6.9
Q ss_pred CceecCCCCCc
Q psy2284 145 SNYTCVPCGAR 155 (175)
Q Consensus 145 ~~YtC~~Cg~r 155 (175)
++|+||.||..
T Consensus 34 ~ky~CpfCGk~ 44 (83)
T 3j21_i 34 QKHTCPVCGRK 44 (83)
T ss_dssp SCBCCSSSCSS
T ss_pred cccCCCCCCCc
Confidence 46677777653
No 207
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=20.49 E-value=44 Score=23.75 Aligned_cols=26 Identities=15% Similarity=0.588 Sum_probs=18.3
Q ss_pred CCCCcccceecCCC-------------CceecCCCCCcc
Q psy2284 131 KFPNRHFCAVCGFP-------------SNYTCVPCGARY 156 (175)
Q Consensus 131 ~~P~r~~C~VCG~~-------------~~YtC~~Cg~ry 156 (175)
.+|...-|-.||.. |...|..||+.|
T Consensus 19 ~L~t~F~CPfCnh~~sV~vkidk~~~~g~l~C~~Cg~~~ 57 (85)
T 1wii_A 19 TLETQFTCPFCNHEKSCDVKMDRARNTGVISCTVCLEEF 57 (85)
T ss_dssp CCSSCCCCTTTCCSSCEEEEEETTTTEEEEEESSSCCEE
T ss_pred CCCCeEcCCCCCCCCeEEEEEEccCCEEEEEcccCCCeE
Confidence 45667778888854 455688888876
No 208
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.41 E-value=25 Score=19.69 Aligned_cols=21 Identities=24% Similarity=0.804 Sum_probs=14.5
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHE 32 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHH
T ss_pred CEECcCCCCcCCCHHHHHHHH
Confidence 588888888877655555543
No 209
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=20.20 E-value=39 Score=24.96 Aligned_cols=22 Identities=27% Similarity=0.780 Sum_probs=16.5
Q ss_pred cccceecC---CC--------CceecCCCCCcc
Q psy2284 135 RHFCAVCG---FP--------SNYTCVPCGARY 156 (175)
Q Consensus 135 r~~C~VCG---~~--------~~YtC~~Cg~ry 156 (175)
-.||..|| ++ ..|.|..||-.+
T Consensus 4 ~~FCp~CgnlL~~~~~~~~~~~~~~C~~C~y~~ 36 (122)
T 1twf_I 4 FRFCRDCNNMLYPREDKENNRLLFECRTCSYVE 36 (122)
T ss_dssp CCBCSSSCCBCEEEEETTTTEEEEECSSSSCEE
T ss_pred CCcccccCccCcccccCcCCCCEEECCcCCCee
Confidence 47999999 31 248899998755
No 210
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=20.08 E-value=23 Score=20.57 Aligned_cols=12 Identities=25% Similarity=0.487 Sum_probs=5.5
Q ss_pred eecCCCCCcccc
Q psy2284 147 YTCVPCGARYCC 158 (175)
Q Consensus 147 YtC~~Cg~ryCS 158 (175)
|.|+-||..|-.
T Consensus 33 ~~C~~C~~~f~~ 44 (57)
T 3uk3_C 33 YKCEFCEYAAAQ 44 (57)
T ss_dssp EECSSSSCEESS
T ss_pred cCCCCCcchhCC
Confidence 345555544433
No 211
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.03 E-value=21 Score=19.60 Aligned_cols=21 Identities=29% Similarity=0.608 Sum_probs=13.6
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHT 32 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHh
Confidence 477888887776655555443
No 212
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.03 E-value=21 Score=19.98 Aligned_cols=21 Identities=38% Similarity=0.736 Sum_probs=14.1
Q ss_pred ceecCCCCCcccccccccccc
Q psy2284 146 NYTCVPCGARYCCVRCLGTHQ 166 (175)
Q Consensus 146 ~YtC~~Cg~ryCS~~C~~~H~ 166 (175)
.|.|..||..|-...=+..|.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~ 32 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQ 32 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHH
T ss_pred CeECCcCChhhCCHHHHHHHH
Confidence 577888888776655555553
No 213
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=20.01 E-value=79 Score=21.98 Aligned_cols=32 Identities=19% Similarity=0.458 Sum_probs=20.7
Q ss_pred CCCcccceecCCCC------ceecCCCCCcccccccccc
Q psy2284 132 FPNRHFCAVCGFPS------NYTCVPCGARYCCVRCLGT 164 (175)
Q Consensus 132 ~P~r~~C~VCG~~~------~YtC~~Cg~ryCS~~C~~~ 164 (175)
...-.+|.|||..+ -.-|-.|...| =..|+..
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~f-H~~Cl~p 59 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAV-HQECYGV 59 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCC-CHHHHTC
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchh-hcccCCC
Confidence 44567999999653 44488887765 3345443
Done!