RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2287
(268 letters)
>d2ddha1 a.29.3.2 (A:278-460) Peroxisomal acyl-CoA oxidase-II,
domains 3 and 4 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 183
Score = 139 bits (350), Expect = 1e-41
Identities = 99/182 (54%), Positives = 129/182 (70%), Gaps = 1/182 (0%)
Query: 63 MIFVRVSLVKNVAAAFLSKAVTIATRYSAVRRQSEMKPGEREPQILDYKTQQYKLFPAIA 122
M+FVR LV N AA LSKA TIA RYSAVRRQSE+K E EPQILD++TQQYKLFP +A
Sbjct: 1 MVFVRSFLVGN-AAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLA 59
Query: 123 TSYALRFSADWLWDIYNSVNADLEKGNMGGLPELHAMSCCLKAVSTSDSATFIEVCRRSC 182
T+YA F ++ + Y +N + +G++ LPELHA++ LKA +T + IE CR +C
Sbjct: 60 TAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMAC 119
Query: 183 GGHGYMNSSNFPNTYGMVTAAETYEGENTVLYLQTARFLIKAWNQLKSGGLLSSTVTYLG 242
GGHGY +SS PN Y T A T+EGENTV+ LQTARFL+K ++Q++SG L+ V+YL
Sbjct: 120 GGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKIYDQVRSGKLVGGMVSYLN 179
Query: 243 KI 244
+
Sbjct: 180 DL 181
>d1w07a1 a.29.3.2 (A:273-461) Acyl-coenzyme A oxidase 1, domains 3
and 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 189
Score = 136 bits (342), Expect = 2e-40
Identities = 89/187 (47%), Positives = 121/187 (64%), Gaps = 1/187 (0%)
Query: 57 KLTYGTMIFVRVSLVKNVAAAFLSKAVTIATRYSAVRRQSEMKPGEREPQILDYKTQQYK 116
+L YGTM++VR ++V + A+ LS+AV IATRYSAVRRQ G E Q++DYKTQQ +
Sbjct: 3 QLVYGTMVYVRQTIVAD-ASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNR 61
Query: 117 LFPAIATSYALRFSADWLWDIYNSVNADLEKGNMGGLPELHAMSCCLKAVSTSDSATFIE 176
LFP +A++YA RF +WL +Y V L + LPE HA + LK+++T+ +A IE
Sbjct: 62 LFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIE 121
Query: 177 VCRRSCGGHGYMNSSNFPNTYGMVTAAETYEGENTVLYLQTARFLIKAWNQLKSGGLLSS 236
CR+ CGGHGY+ S P + + A TYEG+N VL LQ ARFL+K QL SG +
Sbjct: 122 ECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKTVAQLGSGKVPVG 181
Query: 237 TVTYLGK 243
T Y+G+
Sbjct: 182 TTAYMGR 188
>d2ddha3 e.6.1.2 (A:1-267) Peroxisomal acyl-CoA oxidase-II, domains
1 and 2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 267
Score = 79.8 bits (196), Expect = 3e-18
Identities = 33/52 (63%), Positives = 38/52 (73%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNMLMKNAQVLKDGTYVK 52
PLPGI++G+IG K G ++NGYL N RIPR NMLMK AQV DGTYVK
Sbjct: 216 KPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVK 267
>d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and
2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 271
Score = 72.5 bits (177), Expect = 1e-15
Identities = 27/56 (48%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
Query: 1 MPLPGISIGEIGSKLG---MNTVNNGYLGFKNVRIPRNNMLMKNAQVLKDGTYVKS 53
PLP I++G+IG+K+G N+++NG+L F +VRIPR+ MLM+ ++V ++G YV S
Sbjct: 214 SPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPS 269
>d1siqa2 e.6.1.1 (A:3-238) Glutaryl-CoA dehydrogenase GCDH {Human
(Homo sapiens) [TaxId: 9606]}
Length = 236
Score = 49.6 bits (117), Expect = 7e-08
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
+ G+S I K + G + V +P N+L
Sbjct: 194 KGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVL 231
>d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 231
Score = 47.7 bits (112), Expect = 4e-07
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
MP PG+++G+ KLG+ + L F++ RIP+ N+L
Sbjct: 190 MPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLL 227
>d1buca2 e.6.1.1 (A:1-232) Butyryl-CoA dehydrogenase, NM domains
{Megasphaera elsdenii [TaxId: 907]}
Length = 232
Score = 47.3 bits (111), Expect = 5e-07
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
PG + G+ K+G++T L F++V++P NML
Sbjct: 192 DGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENML 229
>d3mdea2 e.6.1.1 (A:11-241) Medium chain acyl-CoA dehydrogenase, NM
domains {Pig (Sus scrofa) [TaxId: 9823]}
Length = 231
Score = 46.5 bits (109), Expect = 9e-07
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
PG+ IG +G + + F++VR+P+ N+L
Sbjct: 191 ADTPGVQIGRKEINMGQRCSDTRGIVFEDVRVPKENVL 228
>d2d29a2 e.6.1.1 (A:2-234) Acyl-CoA dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 233
Score = 46.2 bits (108), Expect = 1e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
P G+ +G KLG+ + L +++ +P +L
Sbjct: 193 RPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALL 230
>d1rx0a2 e.6.1.1 (A:10-240) Isobutyryl-CoA dehydrogenase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 231
Score = 45.7 bits (107), Expect = 2e-06
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
PG+S G+ K+G N+ + F++ +P N +
Sbjct: 191 KGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRI 228
>d1r2ja2 e.6.1.1 (A:3-212) Protein FkbI {Streptomyces hygroscopicus
[TaxId: 1912]}
Length = 210
Score = 45.5 bits (106), Expect = 2e-06
Identities = 8/38 (21%), Positives = 14/38 (36%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
PG+ + + G + L VR+P +L
Sbjct: 168 ADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVL 205
>d1ukwa2 e.6.1.1 (A:32-258) Medium chain acyl-CoA dehydrogenase, NM
domains {Thermus thermophilus [TaxId: 274]}
Length = 227
Score = 44.7 bits (104), Expect = 4e-06
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
PG +I K+G L F++V++P N L
Sbjct: 187 RGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRL 224
>d1ivha2 e.6.1.1 (A:6-241) Isovaleryl-coa dehydrogenase, NM domains
{Human (Homo sapiens) [TaxId: 9606]}
Length = 236
Score = 44.4 bits (104), Expect = 4e-06
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
+PG S + KLGM N L F++ +IP N+L
Sbjct: 195 KGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANIL 232
>d2c12a2 e.6.1.1 (A:2-260) Nitroalkane oxidase {Fusarium oxysporum
[TaxId: 5507]}
Length = 259
Score = 43.7 bits (101), Expect = 9e-06
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 2 PLPGISIGEIGSKLGMNTVNNGYLGFKNVRIPRNNML 38
I G T + + F +P N+L
Sbjct: 221 KKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLL 257
>d1rx0a1 a.29.3.1 (A:241-393) Isobutyryl-CoA dehydrogenase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 153
Score = 34.2 bits (77), Expect = 0.006
Identities = 13/67 (19%), Positives = 25/67 (37%)
Query: 157 HAMSCCLKAVSTSDSATFIEVCRRSCGGHGYMNSSNFPNTYGMVTAAETYEGENTVLYLQ 216
A+ K +T + + GG+GY+ + EG N V+ +
Sbjct: 86 VALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRIL 145
Query: 217 TARFLIK 223
+R L++
Sbjct: 146 ISRSLLQ 152
>d2d29a1 a.29.3.1 (A:235-387) Acyl-CoA dehydrogenase {Thermus
thermophilus [TaxId: 274]}
Length = 153
Score = 33.8 bits (76), Expect = 0.008
Identities = 13/70 (18%), Positives = 26/70 (37%)
Query: 155 ELHAMSCCLKAVSTSDSATFIEVCRRSCGGHGYMNSSNFPNTYGMVTAAETYEGENTVLY 214
+ K ++ + + + GG+GY+ + EG + +L
Sbjct: 83 PFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILK 142
Query: 215 LQTARFLIKA 224
L AR L++A
Sbjct: 143 LVIARRLLEA 152
>d1u8va2 e.6.1.1 (A:1-275) 4-hydroxybutyryl-CoA dehydratase AbfD, NM
domains {Clostridium aminobutyricum [TaxId: 33953]}
Length = 275
Score = 34.2 bits (78), Expect = 0.012
Identities = 7/54 (12%), Positives = 14/54 (25%), Gaps = 15/54 (27%)
Query: 1 MPLPGISIGEIGSKLGMNTVNNG---------------YLGFKNVRIPRNNMLM 39
G+ + + G + F NV IP + + +
Sbjct: 221 SDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFL 274
>d1r2ja1 a.29.3.1 (A:213-365) Protein FkbI {Streptomyces
hygroscopicus [TaxId: 1912]}
Length = 153
Score = 31.2 bits (69), Expect = 0.072
Identities = 6/45 (13%), Positives = 12/45 (26%)
Query: 178 CRRSCGGHGYMNSSNFPNTYGMVTAAETYEGENTVLYLQTARFLI 222
+ G Y E EG + + + A+ +
Sbjct: 106 AAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHAL 150
>d1jqia1 a.29.3.1 (A:235-387) Butyryl-CoA dehydrogenase, C-domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 153
Score = 30.0 bits (66), Expect = 0.19
Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 1/116 (0%)
Query: 111 KTQQYKLFPAIATSYALRFSADWLWDIYNSVNADLEKGNMGGLPELHAMSCCLKAVSTSD 170
+ + P AD + ++ + + + ++ S+
Sbjct: 37 ENRHAFGAPLTKLQNIQFKLADMALALESARLLTWRAAMLKDNKKPFTKESAMAKLAASE 96
Query: 171 SATFI-EVCRRSCGGHGYMNSSNFPNTYGMVTAAETYEGENTVLYLQTARFLIKAW 225
+AT I + GG GY+ Y E YEG + + L A L++++
Sbjct: 97 AATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEGTSEIQRLVIAGHLLRSY 152
>d1oqca_ a.24.15.1 (A:) Augmenter of liver regeneration {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 112
Score = 29.2 bits (65), Expect = 0.22
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 109 DYKTQQYKLFPAIATSYALRFSADWLWDIYNSVNADLEK 147
D + + + P +T + + WL ++N VN L K
Sbjct: 56 DIRKRIDRSQPDTSTRVSF---SQWLCRLHNEVNRKLGK 91
>d1ivha1 a.29.3.1 (A:242-392) Isovaleryl-CoA dehydrogenase, C-domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 151
Score = 29.2 bits (64), Expect = 0.30
Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 1/94 (1%)
Query: 131 ADWLWDIYNSVNADLEKGNMGGLPELHAMSCCLKAVSTSDSATFI-EVCRRSCGGHGYMN 189
AD + A C + +++ AT + + GG+GY+N
Sbjct: 57 ADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYIN 116
Query: 190 SSNFPNTYGMVTAAETYEGENTVLYLQTARFLIK 223
E G + V L R
Sbjct: 117 DFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNA 150
>d1zupa1 c.55.3.11 (A:1-301) Hypothetical protein TM1739 {Thermotoga
maritima [TaxId: 2336]}
Length = 301
Score = 29.5 bits (66), Expect = 0.36
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 13/84 (15%)
Query: 35 NNMLMKNAQVLKDGTYVKSKNDKLTYGTMIFVRVSLVKNVAAAFLSKAVTIATRYSAVRR 94
+ KN ++KDG + + G + LVKN+ LSK + +R
Sbjct: 145 RKHMDKNILIVKDGPAARELPFEENVGP-----IGLVKNIGVTELSKE-----DFKKLR- 193
Query: 95 QSEMKPGEREPQILDYKTQQYKLF 118
+K G+R + + K
Sbjct: 194 --FLKKGKRSKMFVSSRETPLKKV 215
>d1an7a_ d.140.1.1 (A:) Ribosomal protein S8 {Thermus thermophilus
[TaxId: 274]}
Length = 136
Score = 28.4 bits (63), Expect = 0.44
Identities = 10/100 (10%), Positives = 27/100 (27%), Gaps = 4/100 (4%)
Query: 17 MNTVNNGYL-GFKNVRIPRNNMLMKNAQVLKDGTYVKS--KNDKLTYGTMIFVRVSLVKN 73
+ + N ++ +P + + ++L ++K + D + +
Sbjct: 8 LTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRR 67
Query: 74 VAAAFLSKAV-TIATRYSAVRRQSEMKPGEREPQILDYKT 112
+ V R S R+ + E
Sbjct: 68 QGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGI 107
>d1jr8a_ a.24.15.1 (A:) Thiol oxidase Erv2p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 105
Score = 28.0 bits (62), Expect = 0.54
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 133 WLWDIYNSVNADLEK 147
W I+N VN L+K
Sbjct: 75 WGCHIHNKVNEYLKK 89
>d1buca1 a.29.3.1 (A:233-383) Butyryl-CoA dehydrogenase, C-domain
{Megasphaera elsdenii [TaxId: 907]}
Length = 151
Score = 28.4 bits (62), Expect = 0.59
Identities = 14/70 (20%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 155 ELHAMSCCLKAVSTSDSATFIEV-CRRSCGGHGYMNSSNFPNTYGMVTAAETYEGENTVL 213
+ + + SD A + + GG+GY + YEG N V
Sbjct: 82 KPFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQ 141
Query: 214 YLQTARFLIK 223
+ T L++
Sbjct: 142 LMVTGGALLR 151
>d2c12a1 a.29.3.1 (A:261-430) Nitroalkane oxidase {Fusarium
oxysporum [TaxId: 5507]}
Length = 170
Score = 27.6 bits (60), Expect = 1.3
Identities = 20/143 (13%), Positives = 39/143 (27%), Gaps = 14/143 (9%)
Query: 82 AVTIATRYSAVRRQSEMKPGEREPQILDYKTQQYKLFPAIATSYALRFSADWLWDIYNSV 141
A A ++ + K + D + TS L + A +
Sbjct: 31 AFEEALVFAKSDTRGGSKHIIEHQSVADK---LIDCKIRLETSRLLVWKAVTTLE----- 82
Query: 142 NADLEKGNMGGLPELHAMSCCLKAVSTSDSATFIEVCRRSCGGHGYMNSSNFPNTYGMVT 201
+ LE + + AV ++ G Y +FP V
Sbjct: 83 DEALEWKVKLEMAMQTKIYTTDVAVECVI------DAMKAVGMKSYAKDMSFPRLLNEVM 136
Query: 202 AAETYEGENTVLYLQTARFLIKA 224
++G N L + + ++
Sbjct: 137 CYPLFDGGNIGLRRRQMQRVMAL 159
>d1urja_ e.58.1.1 (A:) Infected cell protein 8, ICP8 {Herpes simplex
virus 1 [TaxId: 10298]}
Length = 1122
Score = 26.3 bits (58), Expect = 5.3
Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 10/125 (8%)
Query: 21 NNGYLGFKNVRIPRNNM--LMKNAQVLKDGTYVKSKND-KLTYGTMIFVRVSLVKN--VA 75
NNG+L K + + + + + +S + + T+ F + VK+ +
Sbjct: 712 NNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLF 771
Query: 76 AAFLSKAVTIATRYSAVRRQSEMKPGEREPQI---LDYKTQQY--KLFPAIATSYALRFS 130
A + A A A + + KP +R + L + +Q+ +FP + + +
Sbjct: 772 AGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPN 831
Query: 131 ADWLW 135
W W
Sbjct: 832 PQWFW 836
>d2gy9h1 d.140.1.1 (H:3-128) Ribosomal protein S8 {Escherichia
coli [TaxId: 562]}
Length = 126
Score = 25.3 bits (55), Expect = 5.8
Identities = 8/38 (21%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 17 MNTVNNGYL-GFKNVRIPRNNMLMKNAQVLKDGTYVKS 53
+ + NG V +P + + + A VLK+ +++
Sbjct: 8 LTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIED 45
>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga
maritima [TaxId: 2336]}
Length = 182
Score = 25.3 bits (54), Expect = 7.7
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 3/30 (10%)
Query: 74 VAAAFLSKAVTIATRYSAVRRQSEMKPGER 103
V A + + AT Y A E G+
Sbjct: 5 VLAMAM---CSGATAYHAFDEYPESFAGKT 31
>d1ia9a_ d.144.1.5 (A:) Trp Ca-channel kinase domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 278
Score = 25.3 bits (55), Expect = 9.0
Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 25/153 (16%)
Query: 89 YSAVRRQSEMKPGEREP-QILDYKTQQYKLFPAIATSYALRFSADWLWDIYNSVNA---D 144
YSAV R + M+ + P + + + ++ +S + + A
Sbjct: 3 YSAVERNNLMRLSQSIPFVPVPPRGEPVTVYRLEESS-PSILNNSMSSWSQLGLCAKIEF 61
Query: 145 LEKGNMGGLPELHAMSCCLKAVSTSDSATFIEVCRRSCGGHGYMNSSNFPNTYGMVTAAE 204
L K MGG + +K + T GH Y+ S P +
Sbjct: 62 LSKEEMGG-----GLRRAVKVLCTWSEH------DILKSGHLYIIKSFLPEVINTW--SS 108
Query: 205 TY-EGENTVLYLQ------TARFLIKAWNQLKS 230
Y E L L+ A+ L A+NQ+K
Sbjct: 109 IYKEDTVLHLCLREIQQQRAAQKLTFAFNQMKP 141
>d1jk0b_ a.25.1.2 (B:) Ribonucleotide reductase R2 {Baker's yeast
(Saccharomyces cerevisiae), Y4 [TaxId: 4932]}
Length = 285
Score = 25.1 bits (54), Expect = 9.8
Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 9/42 (21%)
Query: 97 EMKPGEREPQILDYKTQQYKLFPAIATSYALRFSADWLWDIY 138
+MK E++ +L ++++ +FP +W Y
Sbjct: 7 DMKEAEKDEILLMENSRRFVMFP---------IKYHEIWAAY 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.131 0.383
Gapped
Lambda K H
0.267 0.0441 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 929,324
Number of extensions: 40194
Number of successful extensions: 126
Number of sequences better than 10.0: 1
Number of HSP's gapped: 122
Number of HSP's successfully gapped: 32
Length of query: 268
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 184
Effective length of database: 1,254,276
Effective search space: 230786784
Effective search space used: 230786784
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.5 bits)