RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2288
(247 letters)
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 49.3 bits (118), Expect = 2e-09
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 83 HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAGV 118
+R TG KPF+C C +SFS+ L+ H H V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 37.8 bits (88), Expect = 3e-05
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 111 HLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
G+KP C C +F++ L LH RH
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.6 bits (85), Expect = 8e-05
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 167 HQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKGV 202
R G+KPF+C CD++F+R + H RH V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 31.6 bits (72), Expect = 0.005
Identities = 9/36 (25%), Positives = 13/36 (36%)
Query: 139 HEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEGV 174
I+ F C C F+ L H++ H V
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV 37
Score = 30.5 bits (69), Expect = 0.013
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
G++P+ C CD++F + L H+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 24.3 bits (53), Expect = 2.1
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTG 89
F C C + F+ L H + H
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRHML 36
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 49.2 bits (118), Expect = 3e-09
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 86 IHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG 117
IH+GEKP+ C CGK+FS+ IL H VH G
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 41.5 bits (98), Expect = 2e-06
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 114 VHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
+H+G KP+ C +CG AF++ S L H+ H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 34.1 bits (79), Expect = 7e-04
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGE 90
+ C C K F+ L H R+HTGE
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 33.4 bits (77), Expect = 0.001
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
H G KP+ C C K F+R I+ +H H G
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 32.6 bits (75), Expect = 0.002
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
H G +PY C C K F + L +H+ H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 48.5 bits (115), Expect = 8e-09
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
+K + C CGKSF+ + H+++H G++P+ C CG F K L H H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 48.1 bits (114), Expect = 1e-08
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
K + C QCG +FT KSQ H H +R + C VC KF K L H + H
Sbjct: 2 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 40.4 bits (94), Expect = 5e-06
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
K + C+ C K+FT + H++ H G++PY C C K F L H H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 37.7 bits (87), Expect = 6e-05
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 70 CKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
C K F + H +H G +P+ C VCGK F + L H+ +H
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 37.0 bits (85), Expect = 1e-04
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
+ + C C FT KS RH H G++P+ C C K F + + H+ H
Sbjct: 2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 30.4 bits (68), Expect = 0.019
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 42 CSMVFCDEIVLNKHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIH 87
C F + ++H+ H L + C VC K F L H +IH
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 48.1 bits (115), Expect = 8e-09
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 85 RIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG 117
R HTGEKP+ CS C K+F Q+ +L H +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 39.7 bits (93), Expect = 7e-06
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 114 VHAGVKPHICKQCGHAFTQKSQLRLHEMRHGN 145
H G KP+ C C F QK L +H R+ +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 34.3 bits (79), Expect = 7e-04
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
R+H G KP+ C +CDKTF ++ ++ H R+
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 32.3 bits (74), Expect = 0.003
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 143 HGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
H + +AC+ C F K L H + +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 31.6 bits (72), Expect = 0.005
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
H G +PY+CSHCDKTF Q L+ H +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 30.0 bits (68), Expect = 0.018
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEK 91
+ C+ C K F + L H + +
Sbjct: 9 YACSHCDKTFRQKQLLDMHFKRYHDPN 35
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 46.5 bits (111), Expect = 3e-08
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 85 RIHTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
R H+GEKP+ C +C F+Q G + H+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 42.3 bits (100), Expect = 9e-07
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 114 VHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
H+G KP+ C C FTQ +++H ++
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 36.9 bits (86), Expect = 8e-05
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
R+H G KP+ C C FT+ MK H+ +
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 33.8 bits (78), Expect = 0.001
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSHKT 229
H G +PY C C F + ++ H L T
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQKHT 33
Score = 27.3 bits (61), Expect = 0.17
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 143 HGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
H + + C +C +FT ++ H
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 26.9 bits (60), Expect = 0.28
Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 65 FTCTVCKKVFNNIKSLKTHS-RIHTGE 90
+ C +C F ++K H + HT
Sbjct: 9 YECYICHARFTQSGTMKMHILQKHTEN 35
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 44.6 bits (106), Expect = 1e-07
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 88 TGEKPFRCSVCGKSFSQRGILSSHL-AVHAGVKPHICK 124
+ KP+ C CGK FS+ L+ H+ VH +PH C+
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38
Score = 40.7 bits (96), Expect = 3e-06
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 65 FTCTVCKKVFNNIKSLKTHSR-IHTGEKPFRCSV 97
+ C C K F+ L H + +HT E+P +C V
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 37.3 bits (87), Expect = 5e-05
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMR-HGNIRHFACNV 153
KP+IC+ CG F++ L H + H + R C V
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 36.1 bits (84), Expect = 1e-04
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNR-HKGVQPYSC 207
KP+ C+ C K F+R + H+ + H +P+ C
Sbjct: 4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 26.1 bits (58), Expect = 0.48
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 204 PYSCSHCDKTFFDAQSLNKH 223
PY C C K F LN H
Sbjct: 5 PYICQSCGKGFSRPDHLNGH 24
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 44.0 bits (104), Expect = 2e-07
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 83 HSRIHTGEKPFRCSVCGKSFSQRGILSSHLAVHAG 117
+ ++C CGKSFS LS H H G
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 38.2 bits (89), Expect = 3e-05
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 111 HLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
+ + C +CG +F+ S L H H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 35.9 bits (83), Expect = 2e-04
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 166 RHQRSHEGVKPFRCEYCDKTFTRQIIMKEHLNRHKG 201
R + + ++C+ C K+F+ + +H H G
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 35.5 bits (82), Expect = 2e-04
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 139 HEMRHGNIRHFACNVCPFKFTTKSDLQRHQRSHEG 173
E + R + C+ C F+ SDL +H+R+H G
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 29.4 bits (66), Expect = 0.041
Identities = 11/37 (29%), Positives = 17/37 (45%)
Query: 54 KHVEEHSTLGKFTCTVCKKVFNNIKSLKTHSRIHTGE 90
+ + ++ C C K F++ L H R HTGE
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 28.2 bits (63), Expect = 0.086
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 195 HLNRHKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
+ + + Y C C K+F + L+KH+ +H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 40.9 bits (96), Expect = 3e-06
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 87 HTGEKPFRCSVCGKSFSQRGILSSHLAVH 115
+G++PF C +C +F+ + + HL VH
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 35.1 bits (81), Expect = 3e-04
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 115 HAGVKPHICKQCGHAFTQKSQLRLHEMRH 143
+G +P +C+ C AFT K+ H H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 30.9 bits (70), Expect = 0.012
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 171 HEGVKPFRCEYCDKTFTRQIIMKEHLNRH 199
G +PF C C FT + HL H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.7 bits (67), Expect = 0.027
Identities = 7/29 (24%), Positives = 11/29 (37%)
Query: 199 HKGVQPYSCSHCDKTFFDAQSLNKHKLSH 227
G +P+ C C F + +H H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.0 bits (65), Expect = 0.047
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 143 HGNIRHFACNVCPFKFTTKSDLQRHQRSH 171
R F C +C FTTK++ RH + H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 27.0 bits (60), Expect = 0.20
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGE 90
F C +C F + H ++HT
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTDT 33
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 39.1 bits (92), Expect = 1e-05
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVHAG 117
+KPF+C +C ++FS+ L++H+ H G
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 35.3 bits (82), Expect = 2e-04
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
KP C+ C F++ L H H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 31.8 bits (73), Expect = 0.003
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTG 89
F C +C + F+ L TH R HTG
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 30.7 bits (70), Expect = 0.009
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEG 173
+ F C +C F+ L H R+H G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 29.1 bits (66), Expect = 0.038
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKG 201
KPF+C C + F+R + H+ H G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 28.3 bits (64), Expect = 0.077
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 204 PYSCSHCDKTFFDAQSLNKHKLSH 227
P+ C C + F + L H +H
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTH 26
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 39.3 bits (92), Expect = 1e-05
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 149 FACN--VCPFKFTTKSDLQRHQRSHEGVKPFRCEY 181
F+C C F K L+ H + H + + CE+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36
Score = 38.9 bits (91), Expect = 1e-05
Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 65 FTCT--VCKKVFNNIKSLKTHSRIHTGEKPFRC 95
F+C C K FN K LK H ++H+ + + C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 35.1 bits (81), Expect = 3e-04
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Query: 93 FRCS--VCGKSFSQRGILSSHLAVHAGVKPHICK 124
F C CGKSF+ + L H+ +H+ + +IC+
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 28.5 bits (64), Expect = 0.074
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Query: 177 FRCEY--CDKTFTRQIIMKEHLNRHKGVQPYSC 207
F C C K+F + +KEH+ H + Y C
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 37.6 bits (88), Expect = 4e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 91 KPFRCSVCGKSFSQRGILSSHLAVHAGVK 119
+ F C VC ++F+++ L H H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 36.1 bits (84), Expect = 1e-04
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEK 91
F C VC + F + LK H R HT EK
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.3 bits (82), Expect = 2e-04
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
+ +C+ C AF ++ L+ H H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 34.1 bits (79), Expect = 7e-04
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVK 175
R F C VC F + L+RH RSH K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.3 bits (69), Expect = 0.016
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKG 201
+ F CE C + F RQ +K H H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 27.2 bits (61), Expect = 0.15
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 204 PYSCSHCDKTFFDAQSLNKHKLSH 227
+ C C + F + L +H SH
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSH 25
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 35.4 bits (82), Expect = 2e-04
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 91 KPFRCSVCGKSFSQRGILSSHLAVHAGVK 119
K F C C K F + LS H+ H K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 34.6 bits (80), Expect = 4e-04
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGEK 91
F C C K F L H + H +K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 33.5 bits (77), Expect = 0.001
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
K C +C F + L H H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTH 25
Score = 33.1 bits (76), Expect = 0.001
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 149 FACNVCPFKFTTKSDLQRHQRSHEGVK 175
FAC CP +F L +H ++H+ K
Sbjct: 3 FACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 28.1 bits (63), Expect = 0.076
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKG 201
K F C C K F R + +H+ H+
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQN 27
Score = 26.2 bits (58), Expect = 0.50
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 204 PYSCSHCDKTFFDAQSLNKHKLSH 227
++C C K F + L+KH +H
Sbjct: 2 KFACPECPKRFMRSDHLSKHIKTH 25
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 34.9 bits (81), Expect = 3e-04
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMRH 143
KP+ C +CG AF+Q S L H+ H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 33.3 bits (77), Expect = 0.001
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 91 KPFRCSVCGKSFSQRGILSSHLAVH 115
KP++C CGK+FSQ L +H +H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 27.6 bits (62), Expect = 0.14
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSH 171
+ + C C F+ S L HQR H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 27.6 bits (62), Expect = 0.15
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHT 88
+ C C K F+ L H RIHT
Sbjct: 3 YKCLECGKAFSQNSGLINHQRIHT 26
Score = 26.0 bits (58), Expect = 0.46
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 204 PYSCSHCDKTFFDAQSLNKHKLSH 227
PY C C K F L H+ H
Sbjct: 2 PYKCLECGKAFSQNSGLINHQRIH 25
Score = 25.6 bits (57), Expect = 0.64
Identities = 8/26 (30%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHK 200
KP++C C K F++ L H+
Sbjct: 1 KPYKCLECGKAFSQ----NSGLINHQ 22
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 35.3 bits (81), Expect = 4e-04
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 78 KSLKTHSRIHTGEKPFRCSVC--GKSFSQRGILSSHLAVHAGVK 119
+ +K F C K+F +R + SH+ H +
Sbjct: 4 RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.4 bits (63), Expect = 0.10
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 64 KFTCTVCKKVFNNIKSLKTHSRIHTGEK 91
+ C K F ++++H + H ++
Sbjct: 20 ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.4 bits (63), Expect = 0.12
Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 161 KSDLQRHQRSHEGVKPFRCEYCD--KTFTRQIIMKEHLNRHKG 201
+ + ++ + K F C + KTF R+ ++ H+ H
Sbjct: 4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 26.4 bits (58), Expect = 0.45
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 3/41 (7%)
Query: 105 RGILSSHLAVHAGVKPHIC--KQCGHAFTQKSQLRLHEMRH 143
RG + ++ K C C F ++ +R H H
Sbjct: 4 RGSIDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 26.0 bits (57), Expect = 0.63
Identities = 5/39 (12%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 139 HEMRHGNIRHFACNVCP--FKFTTKSDLQRHQRSHEGVK 175
++ + F C F + +++ H ++H +
Sbjct: 9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 32.7 bits (75), Expect = 0.002
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 91 KPFRCSV--CGKSFSQRGILSSHLAVHAGVK 119
+PF C+ CGK F++ L H H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.5 bits (72), Expect = 0.005
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 65 FTCTV--CKKVFNNIKSLKTHSRIHTGEK 91
F CT C K F L+ H R HTGEK
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 30.4 bits (69), Expect = 0.016
Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 119 KPHIC--KQCGHAFTQKSQLRLHEMRH 143
+P +C CG FT+ +L+ H+ H
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 28.8 bits (65), Expect = 0.045
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 149 FACNV--CPFKFTTKSDLQRHQRSHEGVK 175
F C C +FT +LQRH+R+H G K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.4 bits (56), Expect = 0.73
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 175 KPFRCEY--CDKTFTRQIIMKEHLNRHKG 201
+PF C + C K FTR ++ H H G
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 23.4 bits (51), Expect = 4.8
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 204 PYSCSH--CDKTFFDAQSLNKHKLSH 227
P+ C+ C K F + L +HK +H
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTH 27
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 31.9 bits (73), Expect = 0.004
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 91 KPFRCSV--CGKSFSQRGILSSHLAVHAG 117
KP +C+ C KS+S+ L +HL H G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 30.4 bits (69), Expect = 0.013
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 119 KPHICKQ--CGHAFTQKSQLRLHEMRH 143
KPH C C ++++ L+ H H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
Score = 29.2 bits (66), Expect = 0.032
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Query: 65 FTCTV--CKKVFNNIKSLKTHSRIHTGE 90
CT C+K ++ +++LKTH R HTGE
Sbjct: 3 HKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 27.3 bits (61), Expect = 0.18
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEG 173
+ C C ++ +L+ H RSH G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 25.8 bits (57), Expect = 0.65
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 175 KPFRCEY--CDKTFTRQIIMKEHLNRHKG 201
KP +C + C K+++R +K HL H G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 23.4 bits (51), Expect = 3.9
Identities = 8/26 (30%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 204 PYSCSH--CDKTFFDAQSLNKHKLSH 227
P+ C+ C K++ ++L H SH
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHLRSH 27
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 31.5 bits (72), Expect = 0.005
Identities = 8/30 (26%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Query: 90 EKPFRCSV--CGKSFSQRGILSSHLAVHAG 117
++P+ C C K+F + L H H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 27.3 bits (61), Expect = 0.15
Identities = 8/27 (29%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 119 KPHICKQ--CGHAFTQKSQLRLHEMRH 143
+P+ C C AF + L H+ H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 27.3 bits (61), Expect = 0.17
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSH 171
R ++C+ C F DL RH++SH
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 26.9 bits (60), Expect = 0.27
Identities = 7/28 (25%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 65 FTCTV--CKKVFNNIKSLKTHSRIHTGE 90
++C C K F L H + H +
Sbjct: 4 YSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 25.4 bits (56), Expect = 0.90
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 6/28 (21%)
Query: 175 KPFRCEY--CDKTFTRQIIMKEHLNRHK 200
+P+ C++ CDK F R L RHK
Sbjct: 2 RPYSCDHPGCDKAFVR----NHDLIRHK 25
Score = 23.1 bits (50), Expect = 5.3
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 204 PYSCSH--CDKTFFDAQSLNKHKLSH 227
PYSC H CDK F L +HK SH
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 31.9 bits (72), Expect = 0.006
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 123 CKQCGHAFTQKSQLRLHEMRHG 144
C CG FT ++LR HE +HG
Sbjct: 9 CGLCGKVFTDANRLRQHEAQHG 30
Score = 28.8 bits (64), Expect = 0.084
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHKTSA 231
C C K F DA L +H+ H ++
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQHGVTS 33
Score = 26.5 bits (58), Expect = 0.54
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 37 LACNICSMVFCDEIVLNKHVEEHSTLG 63
L C +C VF D L +H +H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQHGVTS 33
Score = 24.2 bits (52), Expect = 4.0
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 93 FRCSVCGKSFSQRGILSSHLAVH 115
C +CGK F+ L H A H
Sbjct: 7 LPCGLCGKVFTDANRLRQHEAQH 29
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 30.8 bits (70), Expect = 0.010
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 91 KPFRCSV--CGKSFSQRGILSSHLAVHAG 117
KPF+C+ CGK FS L +H+ +H G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 29.6 bits (67), Expect = 0.023
Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 119 KPHICKQ--CGHAFTQKSQLRLHEMRH 143
KP C CG F+ LR H H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
Score = 27.3 bits (61), Expect = 0.18
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 65 FTCTV--CKKVFNNIKSLKTHSRIHTGE 90
F CT C K F+ +L+TH RIHTG+
Sbjct: 3 FQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 25.8 bits (57), Expect = 0.64
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSHEG 173
+ F C C +F+ +L+ H R H G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 25.0 bits (55), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 175 KPFRCEY--CDKTFTRQIIMKEHLNRHKG 201
KPF+C + C K F+ ++ H+ H G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 30.4 bits (69), Expect = 0.012
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 91 KPFRCSV--CGKSFSQRGILSSHLAVHAG 117
+P+ C V C + FS+ L+ H+ +H G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 28.8 bits (65), Expect = 0.051
Identities = 7/27 (25%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 119 KPHICKQ--CGHAFTQKSQLRLHEMRH 143
+P+ C C F++ + L H H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 27.7 bits (62), Expect = 0.11
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 149 FACNV--CPFKFTTKSDLQRHQRSHEG 173
+AC V C +F+ +DL RH R H G
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 26.5 bits (59), Expect = 0.28
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 65 FTCTV--CKKVFNNIKSLKTHSRIHTG 89
+ C V C + F+ L H RIHTG
Sbjct: 3 YACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 25.4 bits (56), Expect = 0.86
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 175 KPFRCEY--CDKTFTRQIIMKEHLNRHKG 201
+P+ C CD+ F+R + H+ H G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 22.7 bits (49), Expect = 7.0
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 204 PYSCSH--CDKTFFDAQSLNKHKLSH 227
PY+C CD+ F + L +H H
Sbjct: 2 PYACPVESCDRRFSRSADLTRHIRIH 27
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 30.1 bits (68), Expect = 0.034
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 57 EEHSTLGKFTCTVCKKVFNNIKSLKTH--SRIH 87
+ G C C + F + +LKTH S+ H
Sbjct: 8 PDLPGGGLHRCLACARYFIDSTNLKTHFRSKDH 40
Score = 26.2 bits (58), Expect = 0.81
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 205 YSCSHCDKTFFDAQSLNKHKLS--HK 228
+ C C + F D+ +L H S HK
Sbjct: 16 HRCLACARYFIDSTNLKTHFRSKDHK 41
Score = 26.2 bits (58), Expect = 0.92
Identities = 8/26 (30%), Positives = 10/26 (38%), Gaps = 2/26 (7%)
Query: 177 FRCEYCDKTFTRQIIMKEHLN--RHK 200
RC C + F +K H HK
Sbjct: 16 HRCLACARYFIDSTNLKTHFRSKDHK 41
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 28.9 bits (64), Expect = 0.053
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIHTGE 90
FTC+VC++ F L+ H HTGE
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTGE 30
Score = 25.1 bits (54), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVHAG 117
E+ F CSVC ++F +R L H+ H G
Sbjct: 2 EQVFTCSVCQETFRRRMELRLHMVSHTG 29
Score = 22.8 bits (48), Expect = 6.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 177 FRCEYCDKTFTRQIIMKEHLNRHKG 201
F C C +TF R++ ++ H+ H G
Sbjct: 5 FTCSVCQETFRRRMELRLHMVSHTG 29
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.6 bits (63), Expect = 0.066
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 202 VQPYSCSHCDKTFFDAQSLNKHKLSH 227
V+PY C CD D+ SLNKH H
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIH 26
Score = 24.0 bits (51), Expect = 2.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 118 VKPHICKQCGHAFTQKSQLRLHEMRHGN 145
VKP+ CK C +A S L H H +
Sbjct: 1 VKPYKCKTCDYAAADSSSLNKHLRIHSD 28
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 28.1 bits (63), Expect = 0.075
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 91 KPFRCSV--CGKSFSQRGILSSHLAVHA 116
+P+ C C K F+Q L SH+ HA
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 26.5 bits (59), Expect = 0.30
Identities = 8/27 (29%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 175 KPFRCEY--CDKTFTRQIIMKEHLNRH 199
+P+ C + C+K F + +K H+ H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 25.8 bits (57), Expect = 0.56
Identities = 8/27 (29%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 147 RHFACNV--CPFKFTTKSDLQRHQRSH 171
R + C C KF ++L+ H +H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 25.0 bits (55), Expect = 1.00
Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 119 KPHICKQ--CGHAFTQKSQLRLHEMRH 143
+P++C C F Q + L+ H + H
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 25.0 bits (55), Expect = 1.2
Identities = 8/26 (30%), Positives = 11/26 (42%), Gaps = 2/26 (7%)
Query: 65 FTCTV--CKKVFNNIKSLKTHSRIHT 88
+ C C K F +LK+H H
Sbjct: 3 YVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 23.8 bits (52), Expect = 2.4
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 204 PYSCSH--CDKTFFDAQSLNKHKLSH 227
PY C C+K F + +L H L+H
Sbjct: 2 PYVCPFDGCNKKFAQSTNLKSHILTH 27
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 28.5 bits (63), Expect = 0.079
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 66 TCTVCKKVFNNIKSLKTHSRIHTGEKPF 93
C +C K+F ++ L H H+GEKP+
Sbjct: 7 ACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.9 bits (59), Expect = 0.27
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 205 YSCSHCDKTFFDAQSLNKHKLSH 227
+C C K F D LN+HKLSH
Sbjct: 6 VACEICGKIFRDVYHLNRHKLSH 28
Score = 26.6 bits (58), Expect = 0.31
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEGVKPF 177
+ AC +C F L RH+ SH G KP+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 23.1 bits (49), Expect = 6.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 34 QKSLACNICSMVFCDEIVLNKHVEEHS 60
+K +AC IC +F D LN+H HS
Sbjct: 3 RKQVACEICGKIFRDVYHLNRHKLSHS 29
Score = 22.7 bits (48), Expect = 7.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 95 CSVCGKSFSQRGILSSHLAVHAGVKPH 121
C +CGK F L+ H H+G KP+
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 22.7 bits (48), Expect = 8.5
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 119 KPHICKQCGHAFTQKSQLRLHEMRHGNIRHFA 150
K C+ CG F L H++ H + ++
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS 35
>d2fzcb2 g.41.7.1 (B:101-153) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Escherichia coli
[TaxId: 562]}
Length = 53
Score = 28.5 bits (64), Expect = 0.10
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 169 RSHEGVKPFRCEYCDKTFTRQIIMK 193
R +C+YC+K F+ +++
Sbjct: 28 RKRANDIALKCKYCEKEFSHNVVLA 52
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 27.7 bits (61), Expect = 0.11
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 121 HICKQCGHAFTQKSQLRLHEMRH 143
H+C +CG AF + S+L+ H++ H
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVH 25
Score = 24.6 bits (53), Expect = 1.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 67 CTVCKKVFNNIKSLKTHSRIHTGE 90
C C K F LK H +HTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
Score = 23.4 bits (50), Expect = 3.7
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 95 CSVCGKSFSQRGILSSHLAVHAG 117
C+ CGK+F + L H VH G
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTG 27
Score = 23.0 bits (49), Expect = 6.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEG 173
R C C F S L+RHQ H G
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVHTG 27
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 27.4 bits (61), Expect = 0.17
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHK 228
Y+CS C + F AQ+L H H+
Sbjct: 6 YTCSFCKREFRSAQALGGHMNVHR 29
Score = 26.6 bits (59), Expect = 0.34
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 64 KFTCTVCKKVFNNIKSLKTHSRIHTGEK 91
+TC+ CK+ F + ++L H +H ++
Sbjct: 5 SYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 25.1 bits (55), Expect = 1.2
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 91 KPFRCSVCGKSFSQRGILSSHLAVH 115
+ + CS C + F L H+ VH
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
Score = 23.1 bits (50), Expect = 7.0
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSH 171
R + C+ C +F + L H H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 27.1 bits (60), Expect = 0.17
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVH 115
EKPF C +CG+ F++ H +H
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 24.4 bits (53), Expect = 1.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRH 199
KPF C+ C + F R K H H
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 24.4 bits (53), Expect = 1.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSH 171
+ FAC++C KF + +RH + H
Sbjct: 2 KPFACDICGRKFARSDERKRHTKIH 26
Score = 22.5 bits (48), Expect = 9.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 65 FTCTVCKKVFNNIKSLKTHSRIH 87
F C +C + F K H++IH
Sbjct: 4 FACDICGRKFARSDERKRHTKIH 26
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 27.3 bits (60), Expect = 0.20
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVHAG 117
EKP+ C VCG F ++ +S H+ H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 25.0 bits (54), Expect = 1.3
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 175 KPFRCEYCDKTFTRQIIMKEHLNRHKG 201
KP+ C C F R+ M H+ H G
Sbjct: 2 KPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 24.6 bits (53), Expect = 1.5
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 149 FACNVCPFKFTTKSDLQRHQRSHEG 173
++C VC +F K + H RSH+G
Sbjct: 4 YSCPVCGLRFKRKDRMSYHVRSHDG 28
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 25.9 bits (57), Expect = 0.47
Identities = 9/27 (33%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 92 PFRCSVCGKSFSQRGILSSHL-AVHAG 117
P+ C +C ++F++R +L H +H+G
Sbjct: 1 PYPCGLCNRAFTRRDLLIRHAQKIHSG 27
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 26.2 bits (57), Expect = 0.58
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 88 TGEKPFRCSVCGKSFSQRGILSSH 111
TG KP+ C++C K F R H
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRH 24
Score = 24.7 bits (53), Expect = 2.0
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 201 GVQPYSCSHCDKTFFDAQSLNKHKLS 226
G++PY C+ C K F S ++H S
Sbjct: 2 GIKPYECNICAKRFMWRDSFHRHVTS 27
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 25.8 bits (56), Expect = 0.62
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 67 CTVCKKVFNNIKSLKTHSRIHTGEK 91
C C K F + LK H+R HTGEK
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 25.4 bits (55), Expect = 0.81
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 176 PFRCEYCDKTFTRQIIMKEHLNRHKG 201
P +CE C K F+R+ +K H+ H G
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 25.0 bits (54), Expect = 0.96
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 92 PFRCSVCGKSFSQRGILSSHLAVHAG 117
P +C VCGK FS++ L +H+ H G
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 23.9 bits (51), Expect = 2.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Query: 67 CTVCKKVFNNIKSLKTHSRIHTG 89
C VC K F+ LKTH R HTG
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
Score = 23.5 bits (50), Expect = 4.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 120 PHICKQCGHAFTQKSQLRLHEMRH 143
PH C+ CG F++K +L+ H H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 25.1 bits (54), Expect = 1.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Query: 149 FACNVCPFKFTTKSDLQRHQRSHE 172
+ C +C F KS L RHQR H+
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVHK 24
Score = 23.2 bits (49), Expect = 5.2
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 205 YSCSHCDKTFFDAQSLNKHKLSHK 228
Y C C+++F + +L++H+ HK
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVHK 24
Score = 23.2 bits (49), Expect = 5.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 93 FRCSVCGKSFSQRGILSSHLAVH 115
++C +C +SF ++ LS H VH
Sbjct: 1 YKCGLCERSFVEKSALSRHQRVH 23
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 75
Score = 26.2 bits (57), Expect = 1.1
Identities = 8/23 (34%), Positives = 8/23 (34%)
Query: 205 YSCSHCDKTFFDAQSLNKHKLSH 227
Y C HCD L H H
Sbjct: 19 YQCKHCDSKLQSTAELTSHLNIH 41
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 25.0 bits (54), Expect = 1.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 147 RHFACNVCPFKFTTKSDLQRHQRSHEG 173
R F C +CP+ S L H RSH G
Sbjct: 2 RPFKCQICPYASRNSSQLTVHLRSHTG 28
Score = 23.5 bits (50), Expect = 3.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVHAG 117
E+PF+C +C + L+ HL H G
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTG 28
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 25.1 bits (54), Expect = 1.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 93 FRCSVCGKSFSQRGILSSH 111
F CS CGK+F++R ++ H
Sbjct: 5 FVCSKCGKTFTRRNTMARH 23
Score = 23.9 bits (51), Expect = 3.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 177 FRCEYCDKTFTRQIIMKEH 195
F C C KTFTR+ M H
Sbjct: 5 FVCSKCGKTFTRRNTMARH 23
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 88
Score = 25.8 bits (56), Expect = 1.9
Identities = 18/71 (25%), Positives = 21/71 (29%), Gaps = 13/71 (18%)
Query: 94 RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQK-SQLRLHEMRHGNIRHFACN 152
RC C F+ K + CK CG AF R GN + C
Sbjct: 11 RCYGCAVKFT------------LFKKEYGCKNCGRAFCNGCLSFSALVPRAGNTQQKVCK 58
Query: 153 VCPFKFTTKSD 163
C T S
Sbjct: 59 QCHTILTRGSS 69
>d1pg5b2 g.41.7.1 (B:105-160) Aspartate carbamoyltransferase,
Regulatory-chain, C-terminal domain {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 56
Score = 24.6 bits (54), Expect = 2.4
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 177 FRCEYCDKTFTRQIIMK 193
RCEYC+ IM
Sbjct: 36 MRCEYCETIIDENEIMS 52
>d2ds5a1 g.39.1.11 (A:11-48) ClpX chaperone zinc binding domain
{Escherichia coli [TaxId: 562]}
Length = 38
Score = 24.2 bits (53), Expect = 3.0
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Query: 94 RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQC 126
CS CGKS + L AG +IC +C
Sbjct: 3 YCSFCGKSQHEVRKL------IAGPSVYICDEC 29
>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK,
insert "zinc finger" domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 38
Score = 23.6 bits (51), Expect = 4.4
Identities = 6/43 (13%), Positives = 16/43 (37%), Gaps = 8/43 (18%)
Query: 63 GKFTCTVCKKVFNNIKSLKTHSRIHTGEKPFRCSVCGKSFSQR 105
G+ + ++ I + ++ + V G++ QR
Sbjct: 1 GRLIHPASGRSYHKIFNPP--------KEDMKDDVTGEALVQR 35
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 25.5 bits (55), Expect = 4.4
Identities = 11/61 (18%), Positives = 18/61 (29%), Gaps = 13/61 (21%)
Query: 94 RCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGHAFTQKSQLRLHEMRHGNIRHFACNV 153
RC +CG+ G +C+ C K + R + C +
Sbjct: 50 RCILCGEQLG-----------MLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWL--CKI 96
Query: 154 C 154
C
Sbjct: 97 C 97
>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 31
Score = 23.5 bits (50), Expect = 4.5
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 175 KPFRCEY--CDKTFTRQIIMKEHLNRHKGVQ 203
K F C+ CD FT + MK+H NR ++
Sbjct: 1 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIK 31
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 36
Score = 23.5 bits (51), Expect = 4.7
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 86 IHTGEKPFRCSVCG 99
IH GE +C +C
Sbjct: 14 IHKGEDFEKCPICF 27
Score = 23.1 bits (50), Expect = 5.7
Identities = 8/39 (20%), Positives = 11/39 (28%), Gaps = 13/39 (33%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGH 128
+K C +CG +H G C C
Sbjct: 3 DKFHLCPICGY-------------IHKGEDFEKCPICFR 28
>d1l5xa_ c.106.1.1 (A:) SurE homolog PAE2908 (SurE-alpha) {Archaeon
Pyrobaculum aerophilum [TaxId: 13773]}
Length = 276
Score = 25.5 bits (55), Expect = 5.9
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 126 CGHAFTQKSQLRLHEMRHGNIRHFACN 152
G T LR++E+ R A +
Sbjct: 41 TGLGITLHKPLRMYEVDLCGFRAIATS 67
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 22.9 bits (49), Expect = 6.3
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 203 QPYSC--SHCDKTFFDAQSLNKHKLSH 227
+PY C C K + D SL KH +
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTV 27
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 37
Score = 22.7 bits (49), Expect = 7.3
Identities = 6/14 (42%), Positives = 6/14 (42%)
Query: 86 IHTGEKPFRCSVCG 99
E P C VCG
Sbjct: 14 TAVDEAPEYCPVCG 27
Score = 22.7 bits (49), Expect = 7.9
Identities = 8/39 (20%), Positives = 11/39 (28%), Gaps = 13/39 (33%)
Query: 90 EKPFRCSVCGKSFSQRGILSSHLAVHAGVKPHICKQCGH 128
+K + C +CG P C CG
Sbjct: 3 KKVYICPICGY-------------TAVDEAPEYCPVCGA 28
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 26
Score = 22.8 bits (48), Expect = 7.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 92 PFRCSVCGKSFSQRGILSSHL 112
P++CS C + F Q+ L SH+
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHM 22
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 22.6 bits (48), Expect = 9.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 149 FACNVCPFKFTTKSDLQRHQRS 170
+ C C F F TK +L +H +S
Sbjct: 2 YHCTYCNFSFKTKGNLTKHMKS 23
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.133 0.418
Gapped
Lambda K H
0.267 0.0649 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 866,706
Number of extensions: 39353
Number of successful extensions: 584
Number of sequences better than 10.0: 1
Number of HSP's gapped: 556
Number of HSP's successfully gapped: 273
Length of query: 247
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 164
Effective length of database: 1,268,006
Effective search space: 207952984
Effective search space used: 207952984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.0 bits)