Query psy229
Match_columns 142
No_of_seqs 116 out of 1118
Neff 10.8
Searched_HMMs 46136
Date Fri Aug 16 20:54:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy229.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/229hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412|consensus 99.7 7.2E-17 1.6E-21 100.5 6.8 96 46-141 73-173 (226)
2 KOG4412|consensus 99.7 2.1E-16 4.6E-21 98.4 7.8 97 44-140 37-139 (226)
3 PF12796 Ank_2: Ankyrin repeat 99.7 3.7E-16 8E-21 89.1 7.8 87 50-137 2-89 (89)
4 PHA02791 ankyrin-like protein; 99.6 6.9E-15 1.5E-19 100.1 8.4 96 47-142 130-229 (284)
5 PHA02791 ankyrin-like protein; 99.6 3.3E-14 7.1E-19 96.9 9.3 97 43-141 28-128 (284)
6 KOG0509|consensus 99.5 3.8E-14 8.2E-19 102.4 7.4 96 45-140 78-178 (600)
7 KOG0502|consensus 99.5 2E-14 4.3E-19 92.3 4.8 99 43-141 158-260 (296)
8 KOG0512|consensus 99.5 2.7E-14 5.8E-19 88.6 5.0 83 56-138 75-161 (228)
9 KOG4214|consensus 99.5 9.7E-14 2.1E-18 77.6 6.4 66 75-140 34-100 (117)
10 KOG0195|consensus 99.5 5.8E-14 1.3E-18 93.6 6.4 97 45-141 34-134 (448)
11 PHA02741 hypothetical protein; 99.5 1.9E-13 4.2E-18 86.8 8.7 99 43-141 19-133 (169)
12 KOG0508|consensus 99.5 4.8E-14 1E-18 99.2 6.3 95 45-140 117-215 (615)
13 PHA02875 ankyrin repeat protei 99.5 2.7E-13 5.8E-18 97.1 8.9 96 45-140 102-201 (413)
14 PF13857 Ank_5: Ankyrin repeat 99.5 6.6E-14 1.4E-18 72.9 3.9 49 93-141 1-50 (56)
15 PHA02859 ankyrin repeat protei 99.5 6.1E-13 1.3E-17 87.2 9.2 109 33-141 63-193 (209)
16 KOG0509|consensus 99.5 3E-13 6.5E-18 97.8 8.0 95 47-141 46-146 (600)
17 PLN03192 Voltage-dependent pot 99.5 3E-13 6.6E-18 104.0 8.6 62 79-140 627-688 (823)
18 PHA02743 Viral ankyrin protein 99.5 4.8E-13 1E-17 84.7 8.0 98 44-141 56-162 (166)
19 PF13637 Ank_4: Ankyrin repeat 99.4 3.7E-13 8.1E-18 69.6 5.9 49 79-127 6-54 (54)
20 KOG0508|consensus 99.4 1.8E-13 3.9E-18 96.4 4.7 97 44-140 83-183 (615)
21 PHA02884 ankyrin repeat protei 99.4 1.5E-12 3.3E-17 89.1 8.6 95 47-141 35-138 (300)
22 KOG0514|consensus 99.4 1.3E-12 2.7E-17 89.5 7.9 105 36-140 281-407 (452)
23 PHA02878 ankyrin repeat protei 99.4 1.7E-12 3.7E-17 94.6 9.1 94 45-138 168-266 (477)
24 PHA02859 ankyrin repeat protei 99.4 2.1E-12 4.5E-17 84.7 8.7 98 44-141 50-159 (209)
25 PHA03095 ankyrin-like protein; 99.4 2.4E-12 5.1E-17 93.5 9.6 112 30-141 21-153 (471)
26 KOG4177|consensus 99.4 1.1E-12 2.4E-17 101.4 7.4 63 79-141 545-607 (1143)
27 PHA02874 ankyrin repeat protei 99.4 2.8E-12 6E-17 92.5 9.1 97 45-141 124-224 (434)
28 PHA03100 ankyrin repeat protei 99.4 2.9E-12 6.2E-17 93.3 8.7 63 79-141 220-284 (480)
29 PHA02875 ankyrin repeat protei 99.4 3.8E-12 8.2E-17 91.2 9.1 96 46-141 69-169 (413)
30 PHA03095 ankyrin-like protein; 99.4 3.8E-12 8.2E-17 92.5 9.1 74 68-141 215-291 (471)
31 PHA02878 ankyrin repeat protei 99.4 3.9E-12 8.4E-17 92.8 9.1 63 79-141 173-235 (477)
32 PHA02874 ankyrin repeat protei 99.4 5E-12 1.1E-16 91.2 9.2 68 74-141 123-191 (434)
33 PHA02736 Viral ankyrin protein 99.4 1.1E-11 2.4E-16 77.5 9.5 93 42-134 52-153 (154)
34 PHA02795 ankyrin-like protein; 99.4 5.3E-12 1.1E-16 89.9 8.7 109 33-141 128-255 (437)
35 PHA02743 Viral ankyrin protein 99.4 6.3E-12 1.4E-16 79.6 8.2 100 42-141 17-129 (166)
36 PHA02736 Viral ankyrin protein 99.4 5.6E-12 1.2E-16 78.8 7.8 100 42-141 14-127 (154)
37 PHA03100 ankyrin repeat protei 99.3 1.3E-11 2.7E-16 90.0 9.4 95 46-140 107-209 (480)
38 PHA02795 ankyrin-like protein; 99.3 8.3E-12 1.8E-16 89.0 8.0 91 47-137 190-292 (437)
39 KOG0515|consensus 99.3 5.3E-12 1.1E-16 90.1 6.6 69 67-135 575-644 (752)
40 PHA02716 CPXV016; CPX019; EVM0 99.3 1E-11 2.3E-16 93.8 8.5 58 84-141 189-248 (764)
41 PHA02798 ankyrin-like protein; 99.3 1.4E-11 3.1E-16 90.1 9.0 107 32-138 47-179 (489)
42 PLN03192 Voltage-dependent pot 99.3 1.5E-11 3.2E-16 94.8 8.8 96 46-141 526-656 (823)
43 PHA02946 ankyin-like protein; 99.3 2.2E-11 4.8E-16 88.1 8.7 56 79-134 77-134 (446)
44 PF12796 Ank_2: Ankyrin repeat 99.3 2.9E-11 6.3E-16 68.7 7.5 59 79-141 2-60 (89)
45 PHA02716 CPXV016; CPX019; EVM0 99.3 2E-11 4.3E-16 92.3 8.5 61 81-141 291-353 (764)
46 PHA02876 ankyrin repeat protei 99.3 2.4E-11 5.2E-16 92.1 9.0 96 45-140 375-476 (682)
47 KOG0510|consensus 99.3 1.3E-11 2.9E-16 91.8 6.9 98 43-140 304-410 (929)
48 PHA02946 ankyin-like protein; 99.3 2.8E-11 6.1E-16 87.5 8.1 53 87-140 188-242 (446)
49 PHA02876 ankyrin repeat protei 99.3 2.1E-11 4.5E-16 92.4 7.5 61 81-141 152-212 (682)
50 PHA02989 ankyrin repeat protei 99.2 5E-11 1.1E-15 87.3 9.0 107 35-141 123-290 (494)
51 PHA02917 ankyrin-like protein; 99.2 3.9E-11 8.4E-16 90.3 7.9 108 31-138 43-169 (661)
52 PF13606 Ank_3: Ankyrin repeat 99.2 1.9E-11 4.2E-16 55.2 3.8 30 106-135 1-30 (30)
53 PF00023 Ank: Ankyrin repeat H 99.2 2.3E-11 4.9E-16 56.3 4.0 33 106-138 1-33 (33)
54 PTZ00322 6-phosphofructo-2-kin 99.2 1.1E-10 2.4E-15 88.2 8.9 93 49-141 86-189 (664)
55 KOG0502|consensus 99.2 6.2E-11 1.4E-15 76.4 5.8 75 67-141 152-227 (296)
56 PHA02741 hypothetical protein; 99.2 1.7E-10 3.6E-15 73.3 7.4 96 43-138 58-163 (169)
57 PHA02989 ankyrin repeat protei 99.2 1.9E-10 4.2E-15 84.3 8.6 100 35-134 197-316 (494)
58 KOG0512|consensus 99.1 1.5E-10 3.2E-15 72.2 6.2 63 79-141 68-131 (228)
59 PHA02917 ankyrin-like protein; 99.1 2.3E-10 4.9E-15 86.2 8.4 108 34-141 344-486 (661)
60 PHA02884 ankyrin repeat protei 99.1 2.9E-10 6.4E-15 77.9 8.0 62 79-140 38-104 (300)
61 KOG4177|consensus 99.1 1.7E-10 3.8E-15 89.6 6.7 102 40-141 469-574 (1143)
62 PHA02798 ankyrin-like protein; 99.1 4.3E-10 9.4E-15 82.4 8.4 67 68-134 251-318 (489)
63 PHA02730 ankyrin-like protein; 99.1 5.9E-10 1.3E-14 83.2 8.2 105 34-139 357-494 (672)
64 PHA02730 ankyrin-like protein; 99.1 1.2E-09 2.5E-14 81.7 8.9 68 70-137 36-111 (672)
65 PTZ00322 6-phosphofructo-2-kin 99.1 7.2E-10 1.6E-14 83.8 7.7 63 79-141 87-149 (664)
66 PF13857 Ank_5: Ankyrin repeat 99.1 2.6E-10 5.7E-15 59.2 3.7 47 68-114 9-56 (56)
67 KOG0195|consensus 99.0 6.4E-10 1.4E-14 74.6 6.0 62 79-140 39-100 (448)
68 KOG0505|consensus 99.0 5.2E-10 1.1E-14 80.0 5.8 62 79-140 78-139 (527)
69 PHA02792 ankyrin-like protein; 99.0 1.6E-09 3.4E-14 80.4 8.3 110 32-141 317-444 (631)
70 KOG0505|consensus 99.0 2E-10 4.4E-15 82.0 3.4 62 79-140 203-264 (527)
71 KOG0783|consensus 99.0 6.1E-10 1.3E-14 83.6 5.4 78 64-141 41-120 (1267)
72 TIGR00870 trp transient-recept 99.0 2E-09 4.4E-14 82.5 7.6 67 75-141 128-209 (743)
73 KOG1710|consensus 99.0 3.5E-09 7.5E-14 71.0 7.2 74 67-140 37-112 (396)
74 COG0666 Arp FOG: Ankyrin repea 98.9 1E-08 2.2E-13 67.0 8.6 97 45-141 73-181 (235)
75 cd00204 ANK ankyrin repeats; 98.9 1.7E-08 3.8E-13 60.0 8.9 97 44-140 6-106 (126)
76 KOG4214|consensus 98.9 1.8E-09 3.9E-14 60.7 4.1 62 79-141 7-68 (117)
77 KOG0510|consensus 98.9 8.3E-09 1.8E-13 77.4 8.0 96 45-140 88-187 (929)
78 PHA02792 ankyrin-like protein; 98.9 3.1E-09 6.8E-14 78.8 5.8 100 43-142 35-141 (631)
79 KOG3676|consensus 98.9 6.7E-09 1.4E-13 77.7 7.1 98 44-141 183-309 (782)
80 KOG0507|consensus 98.9 3.1E-09 6.7E-14 79.0 5.3 97 44-140 48-148 (854)
81 KOG0515|consensus 98.8 1.6E-08 3.5E-13 72.8 5.9 61 81-141 557-617 (752)
82 KOG3676|consensus 98.7 3E-08 6.6E-13 74.3 5.9 69 72-140 181-273 (782)
83 TIGR00870 trp transient-recept 98.7 4E-08 8.7E-13 75.5 5.1 98 43-140 126-257 (743)
84 PF13637 Ank_4: Ankyrin repeat 98.6 6.1E-08 1.3E-12 49.8 3.9 35 107-141 1-35 (54)
85 KOG0506|consensus 98.6 4.8E-08 1.1E-12 69.5 4.4 84 48-131 509-597 (622)
86 KOG0511|consensus 98.6 1E-07 2.3E-12 66.2 5.7 55 79-133 41-95 (516)
87 cd00204 ANK ankyrin repeats; 98.6 5.4E-07 1.2E-11 53.5 7.7 67 75-141 7-74 (126)
88 KOG0514|consensus 98.6 1.9E-07 4E-12 64.7 5.7 85 45-129 340-429 (452)
89 KOG0705|consensus 98.5 3.8E-07 8.3E-12 66.4 6.6 59 76-134 662-721 (749)
90 KOG0507|consensus 98.4 1.4E-06 2.9E-11 65.4 6.7 87 43-129 80-170 (854)
91 KOG0818|consensus 98.4 9.1E-07 2E-11 63.5 5.4 63 79-141 138-201 (669)
92 COG0666 Arp FOG: Ankyrin repea 98.3 3.8E-06 8.2E-11 54.8 7.3 63 79-141 78-148 (235)
93 KOG4369|consensus 98.1 5.6E-06 1.2E-10 65.1 5.0 110 28-137 762-887 (2131)
94 KOG0522|consensus 98.0 7.7E-06 1.7E-10 59.2 4.7 61 69-129 49-110 (560)
95 KOG0506|consensus 98.0 4.4E-06 9.5E-11 59.9 3.1 62 79-140 511-573 (622)
96 PF00023 Ank: Ankyrin repeat H 97.9 2.4E-05 5.1E-10 35.8 3.7 30 76-105 3-33 (33)
97 KOG0818|consensus 97.9 4.6E-05 9.9E-10 55.1 6.7 55 75-129 167-222 (669)
98 PF13606 Ank_3: Ankyrin repeat 97.9 2.3E-05 4.9E-10 35.1 3.1 24 79-102 7-30 (30)
99 KOG0522|consensus 97.9 4.7E-05 1E-09 55.3 5.9 45 97-141 45-89 (560)
100 smart00248 ANK ankyrin repeats 97.8 5.2E-05 1.1E-09 32.5 3.8 29 106-134 1-29 (30)
101 KOG0521|consensus 97.7 3.9E-05 8.6E-10 59.2 3.7 62 79-140 661-722 (785)
102 KOG1710|consensus 97.7 0.00021 4.5E-09 48.7 6.5 89 40-128 40-133 (396)
103 KOG4369|consensus 97.7 2.7E-05 6E-10 61.4 2.6 58 79-136 931-988 (2131)
104 KOG0782|consensus 97.6 6.1E-05 1.3E-09 55.5 3.7 62 79-140 904-967 (1004)
105 KOG3609|consensus 97.4 0.00069 1.5E-08 52.0 7.1 87 46-135 63-159 (822)
106 KOG2505|consensus 97.4 0.00038 8.3E-09 50.5 5.5 56 87-142 404-465 (591)
107 KOG0520|consensus 97.1 0.00018 3.9E-09 56.1 0.7 89 46-134 575-668 (975)
108 KOG0782|consensus 96.9 0.0022 4.7E-08 47.7 4.9 84 47-130 901-990 (1004)
109 KOG2384|consensus 96.9 0.008 1.7E-07 38.7 6.5 51 80-130 18-69 (223)
110 KOG0705|consensus 96.8 0.0025 5.5E-08 47.3 4.8 61 81-141 631-695 (749)
111 KOG0521|consensus 96.5 0.0044 9.4E-08 48.3 4.4 97 31-127 642-742 (785)
112 KOG0783|consensus 95.1 0.05 1.1E-06 42.7 4.8 72 45-116 52-128 (1267)
113 KOG2505|consensus 95.0 0.018 4E-07 42.2 2.2 46 70-115 425-471 (591)
114 PF06128 Shigella_OspC: Shigel 94.6 0.15 3.3E-06 34.0 5.4 51 83-133 226-280 (284)
115 KOG0511|consensus 91.1 0.48 1E-05 34.1 4.2 68 49-117 40-111 (516)
116 KOG3609|consensus 88.4 0.69 1.5E-05 36.4 3.6 75 50-131 30-112 (822)
117 PF03158 DUF249: Multigene fam 61.1 28 0.00061 22.8 4.5 43 80-128 149-191 (192)
118 PF11929 DUF3447: Domain of un 60.7 23 0.00049 19.1 3.6 44 79-129 11-54 (76)
119 KOG2384|consensus 59.0 12 0.00027 24.6 2.7 59 47-105 14-77 (223)
120 KOG1709|consensus 48.6 20 0.00043 24.3 2.4 19 80-98 21-39 (271)
121 KOG0520|consensus 46.5 43 0.00093 27.7 4.3 62 67-128 633-701 (975)
122 KOG3836|consensus 42.3 8.5 0.00018 29.6 0.0 46 88-133 410-455 (605)
123 PF04405 ScdA_N: Domain of Unk 33.5 73 0.0016 16.3 3.7 39 84-125 10-48 (56)
124 PF08902 DUF1848: Domain of un 28.1 27 0.00058 24.3 0.6 10 1-10 48-57 (266)
No 1
>KOG4412|consensus
Probab=99.69 E-value=7.2e-17 Score=100.45 Aligned_cols=96 Identities=24% Similarity=0.307 Sum_probs=55.3
Q ss_pred CccccccccCChHHHHHHHHh----CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 46 DSHLRAYTGYGINTLLWYMQH----EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
-+|+|.++..|...+...+.. +++.....+.+. |+|+.+|..++..+|+..|+.++.+|..|.||||-|+.-|.+
T Consensus 73 WtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGkl 152 (226)
T KOG4412|consen 73 WTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKL 152 (226)
T ss_pred CchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccch
Confidence 344454444444443333332 233333334444 566666666666666666666666666666666666666666
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+..|+.+|.+|++||
T Consensus 153 kvie~Li~~~a~~n~qDk~G~ 173 (226)
T KOG4412|consen 153 KVIEYLISQGAPLNTQDKYGF 173 (226)
T ss_pred hhHHHHHhcCCCCCcccccCc
Confidence 666666666666666666665
No 2
>KOG4412|consensus
Probab=99.68 E-value=2.1e-16 Score=98.37 Aligned_cols=97 Identities=22% Similarity=0.341 Sum_probs=55.5
Q ss_pred CCCccccccccCChHHHHHHHHhC----ChhhhccCccc-hhHhhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHc
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQHE----PQTVLQYTHAA-TIQVAKGDKELVLSILAA-GAALELKDGDGNTPLHIAAQN 117 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~tpL~~a~~~ 117 (142)
++++++|++...|...+.+++... ++..+.-+=++ |+|+..|+.++++.|+.+ |+++|+.++.|.|+||||+..
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK 116 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGK 116 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcC
Confidence 455666666666666655555531 12222222222 456666666666666665 666666666666666666666
Q ss_pred CCHHHHHHHHhCCCCcccccCCC
Q psy229 118 NSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 118 ~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|..+++.+|+++|+.++++|..|
T Consensus 117 ~r~eIaqlLle~ga~i~~kD~~~ 139 (226)
T KOG4412|consen 117 GRLEIAQLLLEKGALIRIKDKQG 139 (226)
T ss_pred ChhhHHHHHHhcCCCCccccccc
Confidence 66666666666666666666554
No 3
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.68 E-value=3.7e-16 Score=89.11 Aligned_cols=87 Identities=28% Similarity=0.433 Sum_probs=68.6
Q ss_pred cccccCChHHHHHHHHhCChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHh
Q psy229 50 RAYTGYGINTLLWYMQHEPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLG 128 (142)
Q Consensus 50 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~ 128 (142)
+.+...+...+...+.......+. +.++ ++|+..|+.+++++|++.|++++.+|..|+||||+|+..++.+++++|++
T Consensus 2 ~~A~~~~~~~~~~~ll~~~~~~~~-~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 80 (89)
T PF12796_consen 2 HIAAQNGNLEILKFLLEKGADINL-GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLE 80 (89)
T ss_dssp HHHHHTTTHHHHHHHHHTTSTTTS-SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCC-CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 456666777755555542222222 4555 78999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccc
Q psy229 129 FGAEVNVSQ 137 (142)
Q Consensus 129 ~ga~~~~~~ 137 (142)
+|++++.+|
T Consensus 81 ~g~~~~~~n 89 (89)
T PF12796_consen 81 HGADVNIRN 89 (89)
T ss_dssp TTT-TTSS-
T ss_pred cCCCCCCcC
Confidence 999999876
No 4
>PHA02791 ankyrin-like protein; Provisional
Probab=99.59 E-value=6.9e-15 Score=100.14 Aligned_cols=96 Identities=13% Similarity=0.176 Sum_probs=73.2
Q ss_pred ccccccccCChHHHHHHHHh-CChhhhc-cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChH-HHHHHHcCCHHH
Q psy229 47 SHLRAYTGYGINTLLWYMQH-EPQTVLQ-YTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTP-LHIAAQNNSVSV 122 (142)
Q Consensus 47 ~~l~~~~~~~~~~l~~~~~~-~~~~~~~-~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tp-L~~a~~~~~~~~ 122 (142)
++++.+...+...+..++.. .+...+. .+.++ |+|+..|+.+++++|++.|++++.+|..|.|| ||+|+..|+.++
T Consensus 130 TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~ 209 (284)
T PHA02791 130 TSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEM 209 (284)
T ss_pred HHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHH
Confidence 34444444444443333333 2322221 24555 78999999999999999999999999998876 999999999999
Q ss_pred HHHHHhCCCCcccccCCCCC
Q psy229 123 TQALLGFGAEVNVSQIPYFP 142 (142)
Q Consensus 123 ~~~Ll~~ga~~~~~~~~g~~ 142 (142)
+++|+++|++++.+|.+|.|
T Consensus 210 v~lLl~~Ga~in~~~~~~~~ 229 (284)
T PHA02791 210 LQALFKYDINIYSVNLENVL 229 (284)
T ss_pred HHHHHHCCCCCccCcccCcc
Confidence 99999999999999998865
No 5
>PHA02791 ankyrin-like protein; Provisional
Probab=99.56 E-value=3.3e-14 Score=96.87 Aligned_cols=97 Identities=13% Similarity=0.047 Sum_probs=77.2
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...+...+...+.. .++.. .+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..|
T Consensus 28 ~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g 105 (284)
T PHA02791 28 VHGHSALYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSG 105 (284)
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence 457788888888887776555554 22222 23444 6888899999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.++..|+
T Consensus 106 ~~eivk~Ll~~gadin~~~~~g~ 128 (284)
T PHA02791 106 NMQTVKLFVKKNWRLMFYGKTGW 128 (284)
T ss_pred CHHHHHHHHHCCCCcCccCCCCC
Confidence 99999999999999988888775
No 6
>KOG0509|consensus
Probab=99.52 E-value=3.8e-14 Score=102.37 Aligned_cols=96 Identities=23% Similarity=0.226 Sum_probs=70.8
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhh-ccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVL-QYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~-~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
+-+.+|.++-++...+..++.. +++... .++.++ |+|+++|+..++.+|++.|++++.+|.+|.+|+|.|++.++
T Consensus 78 g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~ 157 (600)
T KOG0509|consen 78 GVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGH 157 (600)
T ss_pred CccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCc
Confidence 3344555555555554433333 334333 345555 78888999999999998899988888899999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g 140 (142)
.-++-+|+.+|++++.+|..|
T Consensus 158 ~~~vayll~~~~d~d~~D~~g 178 (600)
T KOG0509|consen 158 TALVAYLLSKGADIDLRDNNG 178 (600)
T ss_pred hHHHHHHHHhcccCCCcCCCC
Confidence 888888888898888888877
No 7
>KOG0502|consensus
Probab=99.51 E-value=2e-14 Score=92.30 Aligned_cols=99 Identities=21% Similarity=0.306 Sum_probs=84.3
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.+++-+++..|..++..++.. +|+.+..+..+. .+|+..|..+++++|+.++.++|.-|.+|.|||.||++.+
T Consensus 158 e~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgn 237 (296)
T KOG0502|consen 158 EFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGN 237 (296)
T ss_pred ccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCC
Confidence 346677888888888887666665 566666666666 5888999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|..|++.|+..||+++..+..|.
T Consensus 238 hvkcve~Ll~sGAd~t~e~dsGy 260 (296)
T KOG0502|consen 238 HVKCVESLLNSGADVTQEDDSGY 260 (296)
T ss_pred hHHHHHHHHhcCCCcccccccCC
Confidence 99999999999999998777663
No 8
>KOG0512|consensus
Probab=99.51 E-value=2.7e-14 Score=88.59 Aligned_cols=83 Identities=27% Similarity=0.356 Sum_probs=66.2
Q ss_pred ChHHHHHHHHhCChhhhccCccc----hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCC
Q psy229 56 GINTLLWYMQHEPQTVLQYTHAA----TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGA 131 (142)
Q Consensus 56 ~~~~l~~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga 131 (142)
....+..++...++.++..+..+ |-|+++|+.+++..|+..|++++++...||||||.||.-++.+++.+|+++|+
T Consensus 75 rl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhga 154 (228)
T KOG0512|consen 75 RLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGA 154 (228)
T ss_pred cHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccC
Confidence 33345555554444444444443 45688999999999999999999999999999999999999999999999999
Q ss_pred CcccccC
Q psy229 132 EVNVSQI 138 (142)
Q Consensus 132 ~~~~~~~ 138 (142)
+|++...
T Consensus 155 DVnA~t~ 161 (228)
T KOG0512|consen 155 DVNAQTK 161 (228)
T ss_pred ccccccc
Confidence 9998654
No 9
>KOG4214|consensus
Probab=99.50 E-value=9.7e-14 Score=77.56 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=59.6
Q ss_pred Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 75 THAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 75 ~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
++++ |+|+-.|+.+++++|+..|++++.+|+.|-|||..|...||.+||++|++.||+...+--.|
T Consensus 34 gR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG 100 (117)
T KOG4214|consen 34 GRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDG 100 (117)
T ss_pred CcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCc
Confidence 4444 78899999999999999999999999999999999999999999999999999987765444
No 10
>KOG0195|consensus
Probab=99.50 E-value=5.8e-14 Score=93.64 Aligned_cols=97 Identities=21% Similarity=0.242 Sum_probs=83.7
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+-+++|.++..|+..+...+.. .++..+.-+.++ |+|+..|+.+++..|+++.+|+|+.+..|+|||||||.-|+-
T Consensus 34 gfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgyd 113 (448)
T KOG0195|consen 34 GFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYD 113 (448)
T ss_pred CcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHH
Confidence 5678888888888887766665 444555555555 799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++-|++.||.+++-|+.|-
T Consensus 114 qiaedli~~ga~v~icnk~g~ 134 (448)
T KOG0195|consen 114 QIAEDLISCGAAVNICNKKGM 134 (448)
T ss_pred HHHHHHHhccceeeecccCCC
Confidence 999999999999999998873
No 11
>PHA02741 hypothetical protein; Provisional
Probab=99.50 E-value=1.9e-13 Score=86.76 Aligned_cols=99 Identities=14% Similarity=0.219 Sum_probs=77.0
Q ss_pred CCCCccccccccCChHHHHHHHH---------hCChhhhccCccc-hhHhhcCC----HHHHHHHHHcCCCCCCCCC-CC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQ---------HEPQTVLQYTHAA-TIQVAKGD----KELVLSILAAGAALELKDG-DG 107 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~---------~~~~~~~~~~~~~-~~a~~~~~----~~~~~~Ll~~~~~~~~~~~-~g 107 (142)
..+.++|+.++..|...+...+. ...+..+..+.++ ++|+..++ .+++++|+..|++++.++. .|
T Consensus 19 ~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g 98 (169)
T PHA02741 19 SEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEG 98 (169)
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCC
Confidence 45778899898888887655432 1234445555665 67888887 5788999999999998885 89
Q ss_pred ChHHHHHHHcCCHHHHHHHHh-CCCCcccccCCCC
Q psy229 108 NTPLHIAAQNNSVSVTQALLG-FGAEVNVSQIPYF 141 (142)
Q Consensus 108 ~tpL~~a~~~~~~~~~~~Ll~-~ga~~~~~~~~g~ 141 (142)
.||||+|+..++.+++++|+. .|++++.+|..|.
T Consensus 99 ~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~ 133 (169)
T PHA02741 99 DTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNK 133 (169)
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCC
Confidence 999999999999999999997 5899998888775
No 12
>KOG0508|consensus
Probab=99.50 E-value=4.8e-14 Score=99.19 Aligned_cols=95 Identities=28% Similarity=0.364 Sum_probs=81.8
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
..+|+..+..+|+..+.+++.+ ++++.++.+.+. ++|+++|+.+++++|++.|+|+|.++..|+|+||.+++.|+.
T Consensus 117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~v 196 (615)
T KOG0508|consen 117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSV 196 (615)
T ss_pred CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccH
Confidence 3477777888888875555444 788888888888 699999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g 140 (142)
+++++|+.+|+.+. +|.+|
T Consensus 197 divq~Ll~~ga~i~-~d~~G 215 (615)
T KOG0508|consen 197 DIVQLLLKHGAKID-VDGHG 215 (615)
T ss_pred HHHHHHHhCCceee-ecCCC
Confidence 99999999999885 55555
No 13
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.48 E-value=2.7e-13 Score=97.08 Aligned_cols=96 Identities=20% Similarity=0.209 Sum_probs=68.1
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ |+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.
T Consensus 102 g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~ 181 (413)
T PHA02875 102 GMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDI 181 (413)
T ss_pred CCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4566666666666654444443 444444455555 677778888888888888888888888888888888888888
Q ss_pred HHHHHHHhCCCCcccccCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g 140 (142)
+++++|+++|++++..+..|
T Consensus 182 eiv~~Ll~~ga~~n~~~~~~ 201 (413)
T PHA02875 182 AICKMLLDSGANIDYFGKNG 201 (413)
T ss_pred HHHHHHHhCCCCCCcCCCCC
Confidence 88888888888887776654
No 14
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.47 E-value=6.6e-14 Score=72.90 Aligned_cols=49 Identities=37% Similarity=0.440 Sum_probs=29.1
Q ss_pred HHHcC-CCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 93 ILAAG-AALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 93 Ll~~~-~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|++.+ ++++.+|..|.||||+|+..|+.+++++|+..|++++.+|..|+
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~ 50 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQ 50 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCC
Confidence 45666 88999999999999999999999999999999999999999885
No 15
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.47 E-value=6.1e-13 Score=87.20 Aligned_cols=109 Identities=13% Similarity=0.142 Sum_probs=77.2
Q ss_pred cCChHHHhhCCCCCccccccc-cCChHHHHHHHH--------------h---CChhhhccCccc-hhHhh--cCCHHHHH
Q psy229 33 RCDHAYLTSLPRPDSHLRAYT-GYGINTLLWYMQ--------------H---EPQTVLQYTHAA-TIQVA--KGDKELVL 91 (142)
Q Consensus 33 ~~~~~~~~~l~~~~~~l~~~~-~~~~~~l~~~~~--------------~---~~~~~~~~~~~~-~~a~~--~~~~~~~~ 91 (142)
.+..++++.+.+.+..++..+ ..|.+++++++. . +++..+..+.++ +.++. .++.++++
T Consensus 63 ~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~ 142 (209)
T PHA02859 63 KVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIK 142 (209)
T ss_pred CCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHH
Confidence 345666666666666665554 345555554332 1 334444445555 34443 56889999
Q ss_pred HHHHcCCCCCCCCCCCChHHHH-HHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 92 SILAAGAALELKDGDGNTPLHI-AAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 92 ~Ll~~~~~~~~~~~~g~tpL~~-a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+|+..|++++.+|..|.||||. +...++.+++++|+++|++++.+|..|.
T Consensus 143 ~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~ 193 (209)
T PHA02859 143 LLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGY 193 (209)
T ss_pred HHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 9999999999999999999995 5677889999999999999999988875
No 16
>KOG0509|consensus
Probab=99.46 E-value=3e-13 Score=97.80 Aligned_cols=95 Identities=22% Similarity=0.266 Sum_probs=74.7
Q ss_pred ccccccccCChHH-HHHHHHhCChhhhccCccc----hhHhhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcCCH
Q psy229 47 SHLRAYTGYGINT-LLWYMQHEPQTVLQYTHAA----TIQVAKGDKELVLSILAAGAALELKD-GDGNTPLHIAAQNNSV 120 (142)
Q Consensus 47 ~~l~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~tpL~~a~~~~~~ 120 (142)
..+..+...|..+ +..++....+.....++.+ |+|+.+++.+++++|+++|+++|+.+ .-+.||||+|+.+|+.
T Consensus 46 ~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~ 125 (600)
T KOG0509|consen 46 DDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHI 125 (600)
T ss_pred hhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcH
Confidence 3344555667666 4444443233332223332 79999999999999999999999988 6789999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.++.+|+++||+++++|.+|+
T Consensus 126 ~vv~lLlqhGAdpt~~D~~G~ 146 (600)
T KOG0509|consen 126 SVVDLLLQHGADPTLKDKQGL 146 (600)
T ss_pred HHHHHHHHcCCCCceecCCCC
Confidence 999999999999999999996
No 17
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.46 E-value=3e-13 Score=104.02 Aligned_cols=62 Identities=21% Similarity=0.339 Sum_probs=58.2
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
+.|+..|+.++++.|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|
T Consensus 627 ~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g 688 (823)
T PLN03192 627 CTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDD 688 (823)
T ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCC
Confidence 46778889999999999999999999999999999999999999999999999999998876
No 18
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.46 E-value=4.8e-13 Score=84.70 Aligned_cols=98 Identities=13% Similarity=0.042 Sum_probs=75.3
Q ss_pred CCCccccccccCChHH----HHHHHHh--CChhhh-ccCccc-hhHhhcCCHHHHHHHHH-cCCCCCCCCCCCChHHHHH
Q psy229 44 RPDSHLRAYTGYGINT----LLWYMQH--EPQTVL-QYTHAA-TIQVAKGDKELVLSILA-AGAALELKDGDGNTPLHIA 114 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~----l~~~~~~--~~~~~~-~~~~~~-~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~tpL~~a 114 (142)
.+.++++.++..+... +..++.. +++..+ ..+.++ |+|+..++.+++++|+. .|++++.++..|.||||+|
T Consensus 56 ~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A 135 (166)
T PHA02743 56 HGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIA 135 (166)
T ss_pred CCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHH
Confidence 4566666666555432 2222222 344444 245555 78999999999999995 7999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 115 AQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 115 ~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+..++.+++++|+.+|++++.++..|.
T Consensus 136 ~~~~~~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 136 YKMRDRRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred HHcCCHHHHHHHHHcCCCCCCcccCCc
Confidence 999999999999999999999988764
No 19
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.45 E-value=3.7e-13 Score=69.58 Aligned_cols=49 Identities=37% Similarity=0.603 Sum_probs=41.1
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHH
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALL 127 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll 127 (142)
+.|+..|+.+++++|++.|++++.+|.+|.||||+|+..|+.+++++|+
T Consensus 6 h~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 6 HWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 6789999999999999999999999999999999999999999999986
No 20
>KOG0508|consensus
Probab=99.42 E-value=1.8e-13 Score=96.38 Aligned_cols=97 Identities=24% Similarity=0.251 Sum_probs=79.5
Q ss_pred CCCccccccccCChHHHHHHHHhCChhhhc---cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQHEPQTVLQ---YTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
++..|+-+++..|+..+.+.+......++. -+.++ ..||..|+.+++++|++.|+|++..|+.|.|.|+.||..|+
T Consensus 83 egappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh 162 (615)
T KOG0508|consen 83 EGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGH 162 (615)
T ss_pred CCCchhhHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCc
Confidence 345666677788999877777763233332 23344 47888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g 140 (142)
.+++++|++.|+++|.++..|
T Consensus 163 ~~I~qyLle~gADvn~ks~kG 183 (615)
T KOG0508|consen 163 VDIAQYLLEQGADVNAKSYKG 183 (615)
T ss_pred hHHHHHHHHhCCCcchhcccC
Confidence 999999999999999987765
No 21
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.41 E-value=1.5e-12 Score=89.08 Aligned_cols=95 Identities=14% Similarity=0.247 Sum_probs=73.0
Q ss_pred ccccccccCChHHHHHHHHh---CChhhh----ccCccc-hhHhhcCCHHHHHHHHHcCCCCCCC-CCCCChHHHHHHHc
Q psy229 47 SHLRAYTGYGINTLLWYMQH---EPQTVL----QYTHAA-TIQVAKGDKELVLSILAAGAALELK-DGDGNTPLHIAAQN 117 (142)
Q Consensus 47 ~~l~~~~~~~~~~l~~~~~~---~~~~~~----~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~-~~~g~tpL~~a~~~ 117 (142)
+.++.+...+...+..++.. +++..+ ..+.++ ++|+..++.+++++|++.|++++.+ +..|.||||.|+..
T Consensus 35 ~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~ 114 (300)
T PHA02884 35 NILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLH 114 (300)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHc
Confidence 34555666666665555444 333321 245555 6788899999999999999999986 45799999999999
Q ss_pred CCHHHHHHHHhCCCCcccccCCCC
Q psy229 118 NSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 118 ~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++.+++++|+.+|++++.++..|.
T Consensus 115 ~~~eivklLL~~GAdin~kd~~G~ 138 (300)
T PHA02884 115 GCLKCLEILLSYGADINIQTNDMV 138 (300)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCC
Confidence 999999999999999999988875
No 22
>KOG0514|consensus
Probab=99.41 E-value=1.3e-12 Score=89.50 Aligned_cols=105 Identities=19% Similarity=0.332 Sum_probs=76.8
Q ss_pred hHHHhhCCCCC-ccccccccCChHHHHHHHHh------CChhhhc-------------cCccc-hhHhhcCCHHHHHHHH
Q psy229 36 HAYLTSLPRPD-SHLRAYTGYGINTLLWYMQH------EPQTVLQ-------------YTHAA-TIQVAKGDKELVLSIL 94 (142)
Q Consensus 36 ~~~~~~l~~~~-~~l~~~~~~~~~~l~~~~~~------~~~~~~~-------------~~~~~-~~a~~~~~~~~~~~Ll 94 (142)
+.++..+++.+ ..+.-..+.|++++...... +..++.. -+++. ++|+.+|+.++++.|+
T Consensus 281 F~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LL 360 (452)
T KOG0514|consen 281 FDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALL 360 (452)
T ss_pred hHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHH
Confidence 44555555433 44555666777775444332 1111111 13333 4889999999999999
Q ss_pred HcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCcccccCCC
Q psy229 95 AAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGF-GAEVNVSQIPY 140 (142)
Q Consensus 95 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~-ga~~~~~~~~g 140 (142)
.+|+|+|.+|..|.|+|++|+++||.|++++||.. ++++.+-|..|
T Consensus 361 acgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~Dg 407 (452)
T KOG0514|consen 361 ACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDG 407 (452)
T ss_pred HccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCC
Confidence 99999999999999999999999999999999988 68988877765
No 23
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.41 E-value=1.7e-12 Score=94.57 Aligned_cols=94 Identities=23% Similarity=0.273 Sum_probs=70.3
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc-CC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQN-NS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~-~~ 119 (142)
+.++++.+...|...+..++.. +++..+..+.++ +.|+..++.+++++|+..|++++.+|..|.||||+|+.. ++
T Consensus 168 g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~ 247 (477)
T PHA02878 168 GNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKD 247 (477)
T ss_pred CCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCC
Confidence 4556666666665554444443 444455556666 678888999999999999999999999999999999865 68
Q ss_pred HHHHHHHHhCCCCcccccC
Q psy229 120 VSVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~ 138 (142)
.+++++|+++|++++.++.
T Consensus 248 ~~iv~~Ll~~gadvn~~~~ 266 (477)
T PHA02878 248 YDILKLLLEHGVDVNAKSY 266 (477)
T ss_pred HHHHHHHHHcCCCCCccCC
Confidence 8999999999999887764
No 24
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.41 E-value=2.1e-12 Score=84.68 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=71.8
Q ss_pred CCCccccccccC--ChHHHHHHHHh---CChhhh-ccCccc-hhHhh---cCCHHHHHHHHHcCCCCCCCCCCCChHHHH
Q psy229 44 RPDSHLRAYTGY--GINTLLWYMQH---EPQTVL-QYTHAA-TIQVA---KGDKELVLSILAAGAALELKDGDGNTPLHI 113 (142)
Q Consensus 44 ~~~~~l~~~~~~--~~~~l~~~~~~---~~~~~~-~~~~~~-~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~ 113 (142)
.+.+|++.+... +...+..++.. +++..+ ..+.++ ++++. .++.+++++|++.|++++.+|..|.||||+
T Consensus 50 ~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~ 129 (209)
T PHA02859 50 LYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHM 129 (209)
T ss_pred cCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 466788766543 35554444444 344443 244555 45554 357899999999999999999999999999
Q ss_pred HHH--cCCHHHHHHHHhCCCCcccccCCCC
Q psy229 114 AAQ--NNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 114 a~~--~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|+. .++.+++++|+.+|++++.+|..|.
T Consensus 130 a~~~~~~~~~iv~~Li~~gadin~~d~~g~ 159 (209)
T PHA02859 130 YMCNFNVRINVIKLLIDSGVSFLNKDFDNN 159 (209)
T ss_pred HHHhccCCHHHHHHHHHcCCCcccccCCCC
Confidence 875 4689999999999999999988774
No 25
>PHA03095 ankyrin-like protein; Provisional
Probab=99.40 E-value=2.4e-12 Score=93.55 Aligned_cols=112 Identities=21% Similarity=0.273 Sum_probs=82.1
Q ss_pred ccccCChHHHhhCCCCCccccccccCChHHHHHHHHh-----------------CChhhhccCccc-hhHhhcC-CHHHH
Q psy229 30 QDTRCDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQH-----------------EPQTVLQYTHAA-TIQVAKG-DKELV 90 (142)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~~-----------------~~~~~~~~~~~~-~~a~~~~-~~~~~ 90 (142)
+..+...+.++.+.+.+..++..+..|.++++.++.. +++..+..+.++ |+|+..+ +.+++
T Consensus 21 ~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv 100 (471)
T PHA03095 21 NASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVI 100 (471)
T ss_pred cCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHH
Confidence 3455566677777666666666666666555555442 233334445555 6788888 58999
Q ss_pred HHHHHcCCCCCCCCCCCChHHHHHH--HcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 91 LSILAAGAALELKDGDGNTPLHIAA--QNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 91 ~~Ll~~~~~~~~~~~~g~tpL~~a~--~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++|++.|++++.++..|.||||+|+ ..++.+++++|+++|++++.+|..|.
T Consensus 101 ~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~ 153 (471)
T PHA03095 101 KLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGM 153 (471)
T ss_pred HHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 9999999999999999999999998 55678999999999999998887764
No 26
>KOG4177|consensus
Probab=99.39 E-value=1.1e-12 Score=101.44 Aligned_cols=63 Identities=38% Similarity=0.525 Sum_probs=60.3
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.|+..|+..++++|+++|++++++++.|+||||.|+++|+.+|+.+|+++||++|..+..|+
T Consensus 545 h~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~ 607 (1143)
T KOG4177|consen 545 HVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGF 607 (1143)
T ss_pred HHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCc
Confidence 689999999999999999999999999999999999999999999999999999999888764
No 27
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.39 E-value=2.8e-12 Score=92.51 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=73.6
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++..+..|.||||+|+..|+.
T Consensus 124 g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~ 203 (434)
T PHA02874 124 LKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDY 203 (434)
T ss_pred CccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 4455555555555553333333 334444455555 688889999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.++..|.
T Consensus 204 ~iv~~Ll~~g~~i~~~~~~g~ 224 (434)
T PHA02874 204 ACIKLLIDHGNHIMNKCKNGF 224 (434)
T ss_pred HHHHHHHhCCCCCcCCCCCCC
Confidence 999999999999888877664
No 28
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.38 E-value=2.9e-12 Score=93.35 Aligned_cols=63 Identities=32% Similarity=0.359 Sum_probs=58.2
Q ss_pred hhHhhcCC--HHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGD--KELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~--~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.|+..++ .+++++|+..|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 220 ~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~ 284 (480)
T PHA03100 220 HIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGD 284 (480)
T ss_pred HHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 57788888 9999999999999999999999999999999999999999999999999988874
No 29
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.38 E-value=3.8e-12 Score=91.21 Aligned_cols=96 Identities=14% Similarity=0.138 Sum_probs=73.9
Q ss_pred CccccccccCChHHHHHHHHh-CCh---hhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 46 DSHLRAYTGYGINTLLWYMQH-EPQ---TVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~-~~~---~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
.++++.+...|...+...+.. ... ..+..+.++ ++|+..++.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 69 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~ 148 (413)
T PHA02875 69 ESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDI 148 (413)
T ss_pred ccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 345555555555553333333 211 122234455 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 149 ~~v~~Ll~~g~~~~~~d~~g~ 169 (413)
T PHA02875 149 KGIELLIDHKACLDIEDCCGC 169 (413)
T ss_pred HHHHHHHhcCCCCCCCCCCCC
Confidence 999999999999999988875
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.37 E-value=3.8e-12 Score=92.49 Aligned_cols=74 Identities=26% Similarity=0.349 Sum_probs=55.7
Q ss_pred ChhhhccCccc-hhHhhcCCH--HHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 68 PQTVLQYTHAA-TIQVAKGDK--ELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 68 ~~~~~~~~~~~-~~a~~~~~~--~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++..+..+.++ |+|+..++. .++..|+..|++++.+|..|.||||+|+..|+.+++++|+.+|++++.++..|.
T Consensus 215 ~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~ 291 (471)
T PHA03095 215 PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGN 291 (471)
T ss_pred CcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 33444445555 566666653 567777888888888888888888888888888888888888888888887774
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.37 E-value=3.9e-12 Score=92.76 Aligned_cols=63 Identities=24% Similarity=0.314 Sum_probs=50.2
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|+|+..|+.+++++|+..|++++.+|..|.||||.|+..++.+++++|+++|++++.+|..|.
T Consensus 173 h~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~ 235 (477)
T PHA02878 173 HYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGN 235 (477)
T ss_pred HHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 577777888888888888888888888888888888888888888888888888887777663
No 32
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.37 E-value=5e-12 Score=91.17 Aligned_cols=68 Identities=28% Similarity=0.363 Sum_probs=60.0
Q ss_pred cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 74 YTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 74 ~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 123 ~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~ 191 (434)
T PHA02874 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGE 191 (434)
T ss_pred CCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCC
Confidence 34444 688889999999999999999999999999999999999999999999999999998887774
No 33
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.36 E-value=1.1e-11 Score=77.48 Aligned_cols=93 Identities=14% Similarity=0.126 Sum_probs=73.9
Q ss_pred CCCCCccccccccCChHH---HHHHHH-h--CChhhh-ccCccc-hhHhhcCCHHHHHHHHHc-CCCCCCCCCCCChHHH
Q psy229 42 LPRPDSHLRAYTGYGINT---LLWYMQ-H--EPQTVL-QYTHAA-TIQVAKGDKELVLSILAA-GAALELKDGDGNTPLH 112 (142)
Q Consensus 42 l~~~~~~l~~~~~~~~~~---l~~~~~-~--~~~~~~-~~~~~~-~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~tpL~ 112 (142)
...+.++++.+...+... +..++. . +.+..+ ..+.++ |+|+..++.+++++|+.. |++++.++..|.||||
T Consensus 52 d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~ 131 (154)
T PHA02736 52 NRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYY 131 (154)
T ss_pred cCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHH
Confidence 446789999998887642 233333 3 444444 255666 789999999999999984 8999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCcc
Q psy229 113 IAAQNNSVSVTQALLGFGAEVN 134 (142)
Q Consensus 113 ~a~~~~~~~~~~~Ll~~ga~~~ 134 (142)
+|+..++.+++++|+.+|++.+
T Consensus 132 ~A~~~~~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 132 VACERHDAKMMNILRAKGAQCK 153 (154)
T ss_pred HHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999998875
No 34
>PHA02795 ankyrin-like protein; Provisional
Probab=99.36 E-value=5.3e-12 Score=89.94 Aligned_cols=109 Identities=11% Similarity=-0.008 Sum_probs=79.8
Q ss_pred cCChHHHhhCCCCCcccc---------ccccCChHHHHHHHHh-CChhhhcc--------Cccc-hhHhhcCCHHHHHHH
Q psy229 33 RCDHAYLTSLPRPDSHLR---------AYTGYGINTLLWYMQH-EPQTVLQY--------THAA-TIQVAKGDKELVLSI 93 (142)
Q Consensus 33 ~~~~~~~~~l~~~~~~l~---------~~~~~~~~~l~~~~~~-~~~~~~~~--------~~~~-~~a~~~~~~~~~~~L 93 (142)
....++++.+.+.|..++ .+...+...+..++.. ........ +.+. +.++..++.+++++|
T Consensus 128 ~n~~eiV~~LI~~GADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~L 207 (437)
T PHA02795 128 YVEIDIVDFMVDHGAVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLC 207 (437)
T ss_pred CCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHH
Confidence 355667777766665554 3444455554444443 21111111 1111 456778899999999
Q ss_pred HHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 94 LAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 94 l~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+..|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 208 Is~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~ 255 (437)
T PHA02795 208 IPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGY 255 (437)
T ss_pred HhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 999999999999999999999999999999999999999999999885
No 35
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.36 E-value=6.3e-12 Score=79.61 Aligned_cols=100 Identities=15% Similarity=0.167 Sum_probs=73.5
Q ss_pred CCCCCccccccccCChHH-HHH---HHHhC---ChhhhccCccc-hhHhhcCCHH---HHHHHHHcCCCCCCCC-CCCCh
Q psy229 42 LPRPDSHLRAYTGYGINT-LLW---YMQHE---PQTVLQYTHAA-TIQVAKGDKE---LVLSILAAGAALELKD-GDGNT 109 (142)
Q Consensus 42 l~~~~~~l~~~~~~~~~~-l~~---~~~~~---~~~~~~~~~~~-~~a~~~~~~~---~~~~Ll~~~~~~~~~~-~~g~t 109 (142)
.......++.+...|... +.. .+... .+..+..+.++ |+|+..++.+ ++++|+..|++++.++ ..|.|
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~T 96 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNT 96 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCc
Confidence 345556666666666542 222 22222 22334455555 6888887765 4799999999999998 58999
Q ss_pred HHHHHHHcCCHHHHHHHHh-CCCCcccccCCCC
Q psy229 110 PLHIAAQNNSVSVTQALLG-FGAEVNVSQIPYF 141 (142)
Q Consensus 110 pL~~a~~~~~~~~~~~Ll~-~ga~~~~~~~~g~ 141 (142)
|||+|+..++.+++++|+. .|++++.+|..|.
T Consensus 97 pLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~ 129 (166)
T PHA02743 97 LLHIAASTKNYELAEWLCRQLGVNLGAINYQHE 129 (166)
T ss_pred HHHHHHHhCCHHHHHHHHhccCCCccCcCCCCC
Confidence 9999999999999999995 7999999998775
No 36
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.35 E-value=5.6e-12 Score=78.84 Aligned_cols=100 Identities=20% Similarity=0.195 Sum_probs=75.6
Q ss_pred CCCCCccccccccCChHH-HHHHHHh--CC-----hhhhccCccc-hhHhhcCCH---HHHHHHHHcCCCCCCCCC-CCC
Q psy229 42 LPRPDSHLRAYTGYGINT-LLWYMQH--EP-----QTVLQYTHAA-TIQVAKGDK---ELVLSILAAGAALELKDG-DGN 108 (142)
Q Consensus 42 l~~~~~~l~~~~~~~~~~-l~~~~~~--~~-----~~~~~~~~~~-~~a~~~~~~---~~~~~Ll~~~~~~~~~~~-~g~ 108 (142)
-..+.++|+.+...|... +...... .. ...+..+.++ |+|+..++. +++++|+..|++++.++. .|.
T Consensus 14 d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~ 93 (154)
T PHA02736 14 DIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGN 93 (154)
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCC
Confidence 345789999888888643 2222111 11 1224445555 688888876 468899999999999984 899
Q ss_pred hHHHHHHHcCCHHHHHHHHhC-CCCcccccCCCC
Q psy229 109 TPLHIAAQNNSVSVTQALLGF-GAEVNVSQIPYF 141 (142)
Q Consensus 109 tpL~~a~~~~~~~~~~~Ll~~-ga~~~~~~~~g~ 141 (142)
||||+|+..++.+++++|+.+ |++++.+|..|.
T Consensus 94 T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~ 127 (154)
T PHA02736 94 TPLHIAVYTQNYELATWLCNQPGVNMEILNYAFK 127 (154)
T ss_pred cHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCC
Confidence 999999999999999999985 999999988774
No 37
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.32 E-value=1.3e-11 Score=89.99 Aligned_cols=95 Identities=20% Similarity=0.279 Sum_probs=68.0
Q ss_pred Cccccccc--cCChHHHHHHHHh---CChhhhccCccc-hhHhhcC--CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc
Q psy229 46 DSHLRAYT--GYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKG--DKELVLSILAAGAALELKDGDGNTPLHIAAQN 117 (142)
Q Consensus 46 ~~~l~~~~--~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~ 117 (142)
.++++.+. ..+...+...+.. +++..+..+.++ +.|+..+ +.+++++|+..|++++.++..|.||||+|+..
T Consensus 107 ~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~ 186 (480)
T PHA03100 107 ITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEK 186 (480)
T ss_pred CchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHh
Confidence 44555555 5555544333333 333334444554 5777788 88899999998988888888899999999999
Q ss_pred CCHHHHHHHHhCCCCcccccCCC
Q psy229 118 NSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 118 ~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|+.+++++|+++|++++..+..|
T Consensus 187 ~~~~iv~~Ll~~ga~~~~~~~~~ 209 (480)
T PHA03100 187 GNIDVIKFLLDNGADINAGDIET 209 (480)
T ss_pred CCHHHHHHHHHcCCCccCCCCCC
Confidence 99999999999998888776655
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.32 E-value=8.3e-12 Score=88.95 Aligned_cols=91 Identities=14% Similarity=0.081 Sum_probs=73.5
Q ss_pred ccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC---
Q psy229 47 SHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS--- 119 (142)
Q Consensus 47 ~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~--- 119 (142)
++++.++..+...+..++.. +.+..+..+.++ ++|+..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 190 t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~ 269 (437)
T PHA02795 190 TRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIA 269 (437)
T ss_pred chhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCccc
Confidence 33444555666666666654 555666667777 68899999999999999999999999999999999999884
Q ss_pred -----HHHHHHHHhCCCCccccc
Q psy229 120 -----VSVTQALLGFGAEVNVSQ 137 (142)
Q Consensus 120 -----~~~~~~Ll~~ga~~~~~~ 137 (142)
.+++++|+++|++++...
T Consensus 270 ~~~~~~eIvelLL~~gadI~~~~ 292 (437)
T PHA02795 270 RRETHLKILEILLREPLSIDCIK 292 (437)
T ss_pred ccccHHHHHHHHHhCCCCCCchh
Confidence 699999999999987643
No 39
>KOG0515|consensus
Probab=99.31 E-value=5.3e-12 Score=90.14 Aligned_cols=69 Identities=32% Similarity=0.407 Sum_probs=58.6
Q ss_pred CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccc
Q psy229 67 EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNV 135 (142)
Q Consensus 67 ~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~ 135 (142)
++..-+.-+.++ |-|+..||.++++||+..|+++|+.|.+||||||+|+.+++..+++.|++.|+-|-+
T Consensus 575 DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 575 DPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFA 644 (752)
T ss_pred CCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEe
Confidence 333333334554 678889999999999999999999999999999999999999999999999987743
No 40
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.31 E-value=1e-11 Score=93.78 Aligned_cols=58 Identities=17% Similarity=0.296 Sum_probs=51.5
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC--HHHHHHHHhCCCCcccccCCCC
Q psy229 84 KGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS--VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 84 ~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~--~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.++.+++++|++.|++++.+|..|.||||+|+..|+ .+++++|+++||+++.++..|.
T Consensus 189 ~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~ 248 (764)
T PHA02716 189 YVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGM 248 (764)
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 457789999999999999999999999999999885 4899999999999999988874
No 41
>PHA02798 ankyrin-like protein; Provisional
Probab=99.31 E-value=1.4e-11 Score=90.08 Aligned_cols=107 Identities=17% Similarity=0.200 Sum_probs=83.6
Q ss_pred ccCChHHHhhCCCCCccccccccCChHHHHHHHH----------------h---CChhhhccCccc-hhHhhcC---CHH
Q psy229 32 TRCDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQ----------------H---EPQTVLQYTHAA-TIQVAKG---DKE 88 (142)
Q Consensus 32 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~----------------~---~~~~~~~~~~~~-~~a~~~~---~~~ 88 (142)
.....++++.+.+.|..++..+..|.++++.++. . +++..+..+.++ |.|+..+ +.+
T Consensus 47 ~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~ 126 (489)
T PHA02798 47 DSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLE 126 (489)
T ss_pred CCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHH
Confidence 3446778888888888888877777777655432 1 344455556666 5666654 789
Q ss_pred HHHHHHHcCCCCCCCCCCCChHHHHHHHcCC---HHHHHHHHhCCCCcccccC
Q psy229 89 LVLSILAAGAALELKDGDGNTPLHIAAQNNS---VSVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 89 ~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~---~~~~~~Ll~~ga~~~~~~~ 138 (142)
++++|++.|++++.+|..|.||||+|++.++ .+++++|+++|++++.++.
T Consensus 127 iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~ 179 (489)
T PHA02798 127 ILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNN 179 (489)
T ss_pred HHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccC
Confidence 9999999999999999999999999999887 8999999999999987753
No 42
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.30 E-value=1.5e-11 Score=94.85 Aligned_cols=96 Identities=24% Similarity=0.300 Sum_probs=72.0
Q ss_pred CccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH-----
Q psy229 46 DSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ----- 116 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~----- 116 (142)
.++++.++..|...+...+.. +++..+..+.++ |+|+..|+.+++++|+..|++++.+|..|.||||+|+.
T Consensus 526 ~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~ 605 (823)
T PLN03192 526 ASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHK 605 (823)
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence 455666777777764444443 566666677777 78888999999999999999999999999998886554
Q ss_pred --------------------------cCCHHHHHHHHhCCCCcccccCCCC
Q psy229 117 --------------------------NNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 117 --------------------------~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.|+.++++.|+++|++++.+|..|.
T Consensus 606 iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~ 656 (823)
T PLN03192 606 IFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGA 656 (823)
T ss_pred HHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 4555666777888888888888774
No 43
>PHA02946 ankyin-like protein; Provisional
Probab=99.28 E-value=2.2e-11 Score=88.07 Aligned_cols=56 Identities=23% Similarity=0.360 Sum_probs=26.4
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHhCCCCcc
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN--SVSVTQALLGFGAEVN 134 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~--~~~~~~~Ll~~ga~~~ 134 (142)
|+|+..++.+++++|++.|++++.+|..|.||||+|+..+ ..+++++|+++|++++
T Consensus 77 h~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin 134 (446)
T PHA02946 77 HIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKIN 134 (446)
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcc
Confidence 3444444444455554444444444444455554444332 2344444444444444
No 44
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.28 E-value=2.9e-11 Score=68.72 Aligned_cols=59 Identities=34% Similarity=0.505 Sum_probs=53.3
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++|+..++.+++++|++.+.+++. |.||||+|+..|+.+++++|+++|++++.++..|+
T Consensus 2 ~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 60 (89)
T PF12796_consen 2 HIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGN 60 (89)
T ss_dssp HHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSS
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCC
Confidence 468899999999999998887766 88999999999999999999999999999988875
No 45
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.28 E-value=2e-11 Score=92.30 Aligned_cols=61 Identities=28% Similarity=0.288 Sum_probs=51.5
Q ss_pred HhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH--cCCHHHHHHHHhCCCCcccccCCCC
Q psy229 81 QVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ--NNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 81 a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~--~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++..|+.+++++|++.|++++.+|..|.||||+|+. .++.+++++|+++|++++.+|..|+
T Consensus 291 AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~ 353 (764)
T PHA02716 291 LARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGN 353 (764)
T ss_pred HHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCC
Confidence 456788889999999999999999999999998754 4578899999999999998888875
No 46
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.28 E-value=2.4e-11 Score=92.08 Aligned_cols=96 Identities=22% Similarity=0.260 Sum_probs=67.0
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCC-HHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC-
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGD-KELVLSILAAGAALELKDGDGNTPLHIAAQNN- 118 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~-~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~- 118 (142)
+.+|++.++..+...+...+.. +++..+..+.++ ++|+..+. ..++++|+..|++++.+|..|.||||+|+..+
T Consensus 375 G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~ 454 (682)
T PHA02876 375 DKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNC 454 (682)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCC
Confidence 3344444444444443333332 333333344444 56655444 56788999999999999999999999999876
Q ss_pred CHHHHHHHHhCCCCcccccCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
+.+++++|+++|++++.+|..|
T Consensus 455 ~~~iv~lLl~~Gad~n~~d~~g 476 (682)
T PHA02876 455 KLDVIEMLLDNGADVNAINIQN 476 (682)
T ss_pred cHHHHHHHHHCCCCCCCCCCCC
Confidence 6899999999999999998876
No 47
>KOG0510|consensus
Probab=99.27 E-value=1.3e-11 Score=91.78 Aligned_cols=98 Identities=26% Similarity=0.289 Sum_probs=77.9
Q ss_pred CCCCccccccccCChHH-HHHHHHh----CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCC---CCCCCCChHHHH
Q psy229 43 PRPDSHLRAYTGYGINT-LLWYMQH----EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALE---LKDGDGNTPLHI 113 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~-l~~~~~~----~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~---~~~~~g~tpL~~ 113 (142)
....+|+|.++..|... +..++.. ..+..+..+.++ |+|+..||..+++.|+..|+... ..|..|.||||.
T Consensus 304 ~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~ 383 (929)
T KOG0510|consen 304 KDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHL 383 (929)
T ss_pred CCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhH
Confidence 44667777777777665 4444441 223345556666 78889999999999999999765 459999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 114 AAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 114 a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|+..|+..++++|+++||++..+|+.|
T Consensus 384 Aa~~g~~~av~~Li~~Ga~I~~~n~~g 410 (929)
T KOG0510|consen 384 AAKYGNTSAVQKLISHGADIGVKNKKG 410 (929)
T ss_pred HHHhccHHHHHHHHHcCCceeeccccc
Confidence 999999999999999999998888776
No 48
>PHA02946 ankyin-like protein; Provisional
Probab=99.26 E-value=2.8e-11 Score=87.54 Aligned_cols=53 Identities=28% Similarity=0.379 Sum_probs=27.1
Q ss_pred HHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHhCCCCcccccCCC
Q psy229 87 KELVLSILAAGAALELKDGDGNTPLHIAAQNN--SVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 87 ~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~--~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
.+++++|++.|++++.+|..|.||||+|+..+ +.+++++|+. |++++.+|..|
T Consensus 188 ~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G 242 (446)
T PHA02946 188 ASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFG 242 (446)
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCC
Confidence 34445555555555555555555555555543 4455555542 55555555444
No 49
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.25 E-value=2.1e-11 Score=92.42 Aligned_cols=61 Identities=26% Similarity=0.428 Sum_probs=56.1
Q ss_pred HhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 81 QVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 81 a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+...++.+++++|+..|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.
T Consensus 152 ~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~ 212 (682)
T PHA02876 152 RIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDL 212 (682)
T ss_pred HHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCC
Confidence 3467889999999999999999999999999999999999999999999999998877664
No 50
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.25 E-value=5e-11 Score=87.35 Aligned_cols=107 Identities=19% Similarity=0.206 Sum_probs=69.6
Q ss_pred ChHHHhhCCCCCccc-cccccCChHHHHHHHHh----------------CChh-hhccCccc-hhHhh----cCCHHHHH
Q psy229 35 DHAYLTSLPRPDSHL-RAYTGYGINTLLWYMQH----------------EPQT-VLQYTHAA-TIQVA----KGDKELVL 91 (142)
Q Consensus 35 ~~~~~~~l~~~~~~l-~~~~~~~~~~l~~~~~~----------------~~~~-~~~~~~~~-~~a~~----~~~~~~~~ 91 (142)
..++++.+.+.+..+ ...+..|.++++.++.. ++.. .+..+.++ +.++. .++.++++
T Consensus 123 ~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~ 202 (494)
T PHA02989 123 NCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIK 202 (494)
T ss_pred cHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHH
Confidence 455666666666666 55666666666554432 1111 12233333 23332 34667777
Q ss_pred HHHHcCCCCC--------------------------------------CCCCCCChHHHHHHHcCCHHHHHHHHhCCCCc
Q psy229 92 SILAAGAALE--------------------------------------LKDGDGNTPLHIAAQNNSVSVTQALLGFGAEV 133 (142)
Q Consensus 92 ~Ll~~~~~~~--------------------------------------~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~ 133 (142)
+|++.|++++ .+|..|.||||+|+..++.+++++|+++|+++
T Consensus 203 ~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadi 282 (494)
T PHA02989 203 YLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDI 282 (494)
T ss_pred HHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCc
Confidence 7777666544 45566899999999999999999999999999
Q ss_pred ccccCCCC
Q psy229 134 NVSQIPYF 141 (142)
Q Consensus 134 ~~~~~~g~ 141 (142)
+.+|..|.
T Consensus 283 n~~d~~G~ 290 (494)
T PHA02989 283 YNVSKDGD 290 (494)
T ss_pred cccCCCCC
Confidence 99988874
No 51
>PHA02917 ankyrin-like protein; Provisional
Probab=99.23 E-value=3.9e-11 Score=90.30 Aligned_cols=108 Identities=9% Similarity=0.059 Sum_probs=82.4
Q ss_pred cccCChHHHhhCCCCCccccccccCChHHHHHHHHhCC-hh-------h-hccC-----c--cc-hhHhhcCCHHHHHHH
Q psy229 31 DTRCDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQHEP-QT-------V-LQYT-----H--AA-TIQVAKGDKELVLSI 93 (142)
Q Consensus 31 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~~~~-~~-------~-~~~~-----~--~~-~~a~~~~~~~~~~~L 93 (142)
......++++.+.+.+..+...+..|.+++++++...- +. . ...+ . .. +.|+..++.+++++|
T Consensus 43 ~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~~~~~~~a~~~~~~e~vk~L 122 (661)
T PHA02917 43 EHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDFNIFSYMKSKNVDVDLIKVL 122 (661)
T ss_pred hhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCcchHHHHHhhcCCHHHHHHH
Confidence 34455788888888888888888888888887776521 11 1 0001 0 11 357778999999999
Q ss_pred HHcCCCCCCCCCCCChHHHHH--HHcCCHHHHHHHHhCCCCcccccC
Q psy229 94 LAAGAALELKDGDGNTPLHIA--AQNNSVSVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 94 l~~~~~~~~~~~~g~tpL~~a--~~~~~~~~~~~Ll~~ga~~~~~~~ 138 (142)
++.|++++.+|..|.||||.+ +..++.+++++|+++||+++.++.
T Consensus 123 l~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~ 169 (661)
T PHA02917 123 VEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE 169 (661)
T ss_pred HHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc
Confidence 999999999999999999954 457899999999999999986653
No 52
>PF13606 Ank_3: Ankyrin repeat
Probab=99.23 E-value=1.9e-11 Score=55.17 Aligned_cols=30 Identities=50% Similarity=0.860 Sum_probs=28.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCccc
Q psy229 106 DGNTPLHIAAQNNSVSVTQALLGFGAEVNV 135 (142)
Q Consensus 106 ~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~ 135 (142)
+|+||||+|++.|+.+++++|+++|+++|.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 489999999999999999999999999874
No 53
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.22 E-value=2.3e-11 Score=56.35 Aligned_cols=33 Identities=45% Similarity=0.687 Sum_probs=31.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCcccccC
Q psy229 106 DGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 106 ~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~ 138 (142)
.|.||||+|++.++.+++++|+++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 489999999999999999999999999998874
No 54
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.20 E-value=1.1e-10 Score=88.16 Aligned_cols=93 Identities=26% Similarity=0.256 Sum_probs=74.1
Q ss_pred ccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHH
Q psy229 49 LRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQ 124 (142)
Q Consensus 49 l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~ 124 (142)
++.++..|.......+.. +++..+..+.++ |+|+..|+.+++++|+..|++++.+|..|.||||+|+..++.++++
T Consensus 86 L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~ 165 (664)
T PTZ00322 86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ 165 (664)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHH
Confidence 334455566654444443 555566666666 7899999999999999999999999999999999999999999999
Q ss_pred HHHhC-------CCCcccccCCCC
Q psy229 125 ALLGF-------GAEVNVSQIPYF 141 (142)
Q Consensus 125 ~Ll~~-------ga~~~~~~~~g~ 141 (142)
+|+.+ |++++..+..|.
T Consensus 166 ~Ll~~~~~~~~~ga~~~~~~~~g~ 189 (664)
T PTZ00322 166 LLSRHSQCHFELGANAKPDSFTGK 189 (664)
T ss_pred HHHhCCCcccccCCCCCccccCCC
Confidence 99999 888877776554
No 55
>KOG0502|consensus
Probab=99.18 E-value=6.2e-11 Score=76.44 Aligned_cols=75 Identities=19% Similarity=0.181 Sum_probs=68.8
Q ss_pred CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 67 EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 67 ~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
-++..+.++.++ .+|+++|+.+++++|+..|+++++..+...++|..|+..|..++|++|+.++.++|..|-+|.
T Consensus 152 ~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGg 227 (296)
T KOG0502|consen 152 KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGG 227 (296)
T ss_pred cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCC
Confidence 456677788887 589999999999999999999999999999999999999999999999999999999988774
No 56
>PHA02741 hypothetical protein; Provisional
Probab=99.17 E-value=1.7e-10 Score=73.30 Aligned_cols=96 Identities=14% Similarity=0.121 Sum_probs=72.5
Q ss_pred CCCCccccccccCChH----HHHHHHHh---CChhhhc-cCccc-hhHhhcCCHHHHHHHHH-cCCCCCCCCCCCChHHH
Q psy229 43 PRPDSHLRAYTGYGIN----TLLWYMQH---EPQTVLQ-YTHAA-TIQVAKGDKELVLSILA-AGAALELKDGDGNTPLH 112 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~----~l~~~~~~---~~~~~~~-~~~~~-~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~tpL~ 112 (142)
..+.++|+.+...+.. .+...+.. +++..+. .+.++ |+|+..++.+++++|+. .|++++..|..|.|||+
T Consensus 58 ~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~ 137 (169)
T PHA02741 58 DAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFE 137 (169)
T ss_pred CCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHH
Confidence 4567788877776652 33333333 3343332 45555 78999999999999998 59999999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCcccccC
Q psy229 113 IAAQNNSVSVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 113 ~a~~~~~~~~~~~Ll~~ga~~~~~~~ 138 (142)
+|...++.+++++|+..++.....++
T Consensus 138 ~A~~~~~~~iv~~L~~~~~~~~~~~~ 163 (169)
T PHA02741 138 LAIDNEDVAMMQILREIVATSRGFSN 163 (169)
T ss_pred HHHHCCCHHHHHHHHHHHHHhcCccc
Confidence 99999999999999998876544433
No 57
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.16 E-value=1.9e-10 Score=84.28 Aligned_cols=100 Identities=12% Similarity=0.113 Sum_probs=75.0
Q ss_pred ChHHHhhCCCCCccccccccCChHHHHHHHH-----------------h--CChhhhccCccc-hhHhhcCCHHHHHHHH
Q psy229 35 DHAYLTSLPRPDSHLRAYTGYGINTLLWYMQ-----------------H--EPQTVLQYTHAA-TIQVAKGDKELVLSIL 94 (142)
Q Consensus 35 ~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~-----------------~--~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll 94 (142)
..++++.+.+.+..++..+..+.++++.++. . +++..+..+.++ ++|+..++.+++++|+
T Consensus 197 ~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL 276 (494)
T PHA02989 197 SIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLL 276 (494)
T ss_pred cHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHH
Confidence 4455666666666666555544444443322 1 334445556776 6888999999999999
Q ss_pred HcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy229 95 AAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVN 134 (142)
Q Consensus 95 ~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~ 134 (142)
+.|++++.+|..|.||||+|+..++.++++.|++++.+.+
T Consensus 277 ~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~~~ 316 (494)
T PHA02989 277 KLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPGKY 316 (494)
T ss_pred HcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCChH
Confidence 9999999999999999999999999999999999876543
No 58
>KOG0512|consensus
Probab=99.15 E-value=1.5e-10 Score=72.17 Aligned_cols=63 Identities=27% Similarity=0.287 Sum_probs=59.4
Q ss_pred hhHhhcCCHHHHHHHHHcCCC-CCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAA-LELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~-~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+|+..+....++.|++..++ +|.+|..|+||||-|++.|+.+|+..|+..||+++++...||
T Consensus 68 lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GW 131 (228)
T KOG0512|consen 68 LWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGW 131 (228)
T ss_pred HHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCc
Confidence 478889999999999998775 999999999999999999999999999999999999999998
No 59
>PHA02917 ankyrin-like protein; Provisional
Probab=99.15 E-value=2.3e-10 Score=86.23 Aligned_cols=108 Identities=16% Similarity=0.121 Sum_probs=79.5
Q ss_pred CChHHHhhCCCCCccccccccCChHH--------HHHHHHh---CChhhhccCccch-hHhh------------------
Q psy229 34 CDHAYLTSLPRPDSHLRAYTGYGINT--------LLWYMQH---EPQTVLQYTHAAT-IQVA------------------ 83 (142)
Q Consensus 34 ~~~~~~~~l~~~~~~l~~~~~~~~~~--------l~~~~~~---~~~~~~~~~~~~~-~a~~------------------ 83 (142)
...+.++.+.+.+..++.++..|+++ +..++.. +....+..+.++. .++.
T Consensus 344 ~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~ 423 (661)
T PHA02917 344 IDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLC 423 (661)
T ss_pred CcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccc
Confidence 34567888888888887777666654 2233332 2233333455553 3332
Q ss_pred -----cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 84 -----KGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 84 -----~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+..+++++|+..|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 424 ~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~ 486 (661)
T PHA02917 424 DMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGY 486 (661)
T ss_pred hhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCC
Confidence 2245678999999999999999999999999999999999999999999999988774
No 60
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.14 E-value=2.9e-10 Score=77.94 Aligned_cols=62 Identities=21% Similarity=0.221 Sum_probs=55.2
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCC----CCCChHHHHHHHcCCHHHHHHHHhCCCCccccc-CCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKD----GDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQ-IPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~----~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~-~~g 140 (142)
+.|+..++.+++++|++.|++++.++ ..|.||||+|+..++.+++++|+++||+++.++ ..|
T Consensus 38 ~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g 104 (300)
T PHA02884 38 YSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104 (300)
T ss_pred HHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC
Confidence 46677899999999999999999874 589999999999999999999999999999864 444
No 61
>KOG4177|consensus
Probab=99.12 E-value=1.7e-10 Score=89.63 Aligned_cols=102 Identities=20% Similarity=0.257 Sum_probs=83.1
Q ss_pred hhCCCCCccccccccCChHHHHHHHHhCChhhhc---cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q psy229 40 TSLPRPDSHLRAYTGYGINTLLWYMQHEPQTVLQ---YTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAA 115 (142)
Q Consensus 40 ~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~ 115 (142)
....++.++++.++..|+.++...+.......+. ..-+. +.+...+...++..++..|++++.++..|+||||.|+
T Consensus 469 ~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~ 548 (1143)
T KOG4177|consen 469 AVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAV 548 (1143)
T ss_pred hhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHH
Confidence 3455678889999999998877666653311111 12222 6778889999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 116 QNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 116 ~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
..|+..+|++|+++|++++++++.|+
T Consensus 549 ~~g~v~~VkfLLe~gAdv~ak~~~G~ 574 (1143)
T KOG4177|consen 549 HYGNVDLVKFLLEHGADVNAKDKLGY 574 (1143)
T ss_pred hcCCchHHHHhhhCCccccccCCCCC
Confidence 99999999999999999999998875
No 62
>PHA02798 ankyrin-like protein; Provisional
Probab=99.11 E-value=4.3e-10 Score=82.37 Aligned_cols=67 Identities=19% Similarity=0.217 Sum_probs=45.3
Q ss_pred ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy229 68 PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVN 134 (142)
Q Consensus 68 ~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~ 134 (142)
++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.|||+.|+..++.++++.|++++++++
T Consensus 251 vN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~ 318 (489)
T PHA02798 251 INQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKN 318 (489)
T ss_pred CCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHH
Confidence 33344445555 56666777777777777777777777777777777777777777777777776665
No 63
>PHA02730 ankyrin-like protein; Provisional
Probab=99.09 E-value=5.9e-10 Score=83.25 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=74.0
Q ss_pred CChHHHhhCCCCCccccccccCChHHHHHHHHhC--------------------ChhhhccCccchh---Hhh-cC----
Q psy229 34 CDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQHE--------------------PQTVLQYTHAATI---QVA-KG---- 85 (142)
Q Consensus 34 ~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~~~--------------------~~~~~~~~~~~~~---a~~-~~---- 85 (142)
...++++.|.+.|..++.. ..|.++++.++... .+..+..+.++.+ ++. .+
T Consensus 357 v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~ 435 (672)
T PHA02730 357 VSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYH 435 (672)
T ss_pred CcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcccccc
Confidence 4566667776666666643 45556665444331 1222233444432 222 21
Q ss_pred -----CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCC
Q psy229 86 -----DKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIP 139 (142)
Q Consensus 86 -----~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~ 139 (142)
..+++++|+..|++++.+|..|.||||+|+..++.+++++|+++||+++.++..
T Consensus 436 ~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~ 494 (672)
T PHA02730 436 CYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRS 494 (672)
T ss_pred ccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCc
Confidence 235689999999999999999999999999999999999999999999999863
No 64
>PHA02730 ankyrin-like protein; Provisional
Probab=99.06 E-value=1.2e-09 Score=81.73 Aligned_cols=68 Identities=16% Similarity=0.262 Sum_probs=50.9
Q ss_pred hhhccCccc-hhHhhcC---CHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC--CHHHHHHHHhCCCCc--cccc
Q psy229 70 TVLQYTHAA-TIQVAKG---DKELVLSILAAGAALELKDGDGNTPLHIAAQNN--SVSVTQALLGFGAEV--NVSQ 137 (142)
Q Consensus 70 ~~~~~~~~~-~~a~~~~---~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~--~~~~~~~Ll~~ga~~--~~~~ 137 (142)
..+..+.++ |+|+..+ +.+++++|++.|++++.+|..|.||||+|+..+ +.+++++|++.|++. +..+
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~ 111 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTS 111 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccc
Confidence 344445565 5666665 588899999889998888888999999888866 688999999886544 5443
No 65
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.06 E-value=7.2e-10 Score=83.79 Aligned_cols=63 Identities=37% Similarity=0.438 Sum_probs=59.6
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.++..|+.+.++.|+..|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 87 ~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~ 149 (664)
T PTZ00322 87 CQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGK 149 (664)
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 467889999999999999999999999999999999999999999999999999999998875
No 66
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.05 E-value=2.6e-10 Score=59.23 Aligned_cols=47 Identities=34% Similarity=0.455 Sum_probs=28.3
Q ss_pred ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q psy229 68 PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIA 114 (142)
Q Consensus 68 ~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a 114 (142)
++..+..+.++ |+|+..|+.+++++|+..|++++.+|..|.||||+|
T Consensus 9 ~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 9 VNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 34445555555 677889999999999999999999999999999987
No 67
>KOG0195|consensus
Probab=99.04 E-value=6.4e-10 Score=74.65 Aligned_cols=62 Identities=27% Similarity=0.349 Sum_probs=58.1
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|+++..|+..++++|+.+|+-+|..+....||||.|+.+||.++|..|+++.+++|+.|.+|
T Consensus 39 hwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehg 100 (448)
T KOG0195|consen 39 HWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHG 100 (448)
T ss_pred hhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccC
Confidence 45577899999999999999999999999999999999999999999999999999999887
No 68
>KOG0505|consensus
Probab=99.03 E-value=5.2e-10 Score=79.95 Aligned_cols=62 Identities=24% Similarity=0.341 Sum_probs=58.0
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|.++...+.+|+++|+++|+++|..|..||||||.|+..|+..++++|+.+|+++.+.|..|
T Consensus 78 hq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg 139 (527)
T KOG0505|consen 78 HQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDG 139 (527)
T ss_pred HHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCC
Confidence 56788899999999999999999999999999999999999999999999999998887764
No 69
>PHA02792 ankyrin-like protein; Provisional
Probab=99.03 E-value=1.6e-09 Score=80.40 Aligned_cols=110 Identities=11% Similarity=0.011 Sum_probs=75.9
Q ss_pred ccCChHHHhhCCCCCccc---------cccccCChHHHHHHHHh---CChhhhccC--ccc-hhHhhcCCH---HHHHHH
Q psy229 32 TRCDHAYLTSLPRPDSHL---------RAYTGYGINTLLWYMQH---EPQTVLQYT--HAA-TIQVAKGDK---ELVLSI 93 (142)
Q Consensus 32 ~~~~~~~~~~l~~~~~~l---------~~~~~~~~~~l~~~~~~---~~~~~~~~~--~~~-~~a~~~~~~---~~~~~L 93 (142)
..+..+.++.+.+.+... ..++..+...+..++.. +++..+..+ .++ +.++..... +++++|
T Consensus 317 ~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklL 396 (631)
T PHA02792 317 HTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLC 396 (631)
T ss_pred CCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHH
Confidence 455666666666555432 22334555555555544 333333332 233 233333332 467889
Q ss_pred HHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 94 LAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 94 l~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+..|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 397 Is~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~ 444 (631)
T PHA02792 397 KPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGS 444 (631)
T ss_pred HhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 999999999999999999999999999999999999999999998874
No 70
>KOG0505|consensus
Probab=99.02 E-value=2e-10 Score=82.00 Aligned_cols=62 Identities=31% Similarity=0.414 Sum_probs=58.3
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|.|+.+|..++.++|+..|.+++.+|..||||||.|+.-|+.+++++|+.+|++.+.++..|
T Consensus 203 HvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g 264 (527)
T KOG0505|consen 203 HVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMG 264 (527)
T ss_pred HHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcC
Confidence 68888999999999999999999999999999999999999999999999999998877655
No 71
>KOG0783|consensus
Probab=99.01 E-value=6.1e-10 Score=83.59 Aligned_cols=78 Identities=21% Similarity=0.277 Sum_probs=71.1
Q ss_pred HHhCChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCC-CCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 64 MQHEPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDG-DGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 64 ~~~~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+..-.++.+.++++. |+++.-+..+++++|+..|+++..+|. .|+||||-|...|+++|+-+|+++|+.+.++|++|+
T Consensus 41 c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkegl 120 (1267)
T KOG0783|consen 41 CQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGL 120 (1267)
T ss_pred hhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCC
Confidence 333567888899998 788889999999999999999999997 699999999999999999999999999999999986
No 72
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.98 E-value=2e-09 Score=82.48 Aligned_cols=67 Identities=22% Similarity=0.201 Sum_probs=58.3
Q ss_pred Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCC--------------CCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCC
Q psy229 75 THAA-TIQVAKGDKELVLSILAAGAALELKD--------------GDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIP 139 (142)
Q Consensus 75 ~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~--------------~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~ 139 (142)
+.++ |+|+.+++.+++++|+++|++++.++ ..|.||||.|+..++.+++++|++.|++++.+|..
T Consensus 128 G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~ 207 (743)
T TIGR00870 128 GITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSL 207 (743)
T ss_pred CCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhh
Confidence 4455 78999999999999999999988653 25889999999999999999999999999998887
Q ss_pred CC
Q psy229 140 YF 141 (142)
Q Consensus 140 g~ 141 (142)
|.
T Consensus 208 g~ 209 (743)
T TIGR00870 208 GN 209 (743)
T ss_pred hh
Confidence 64
No 73
>KOG1710|consensus
Probab=98.96 E-value=3.5e-09 Score=71.02 Aligned_cols=74 Identities=26% Similarity=0.217 Sum_probs=60.8
Q ss_pred CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCC-CCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 67 EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELK-DGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 67 ~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~-~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
.++..+..+.+. ..|+.+|+.++++.|++.|+|+|.. +..++||||+|+..|+.++.++|++.|+.....|.-|
T Consensus 37 ~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvg 112 (396)
T KOG1710|consen 37 QVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVG 112 (396)
T ss_pred hhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchh
Confidence 344445445554 4778899999999999999999874 4568999999999999999999999999988777544
No 74
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.93 E-value=1e-08 Score=67.03 Aligned_cols=97 Identities=26% Similarity=0.325 Sum_probs=75.4
Q ss_pred CCccccccccCChHHHH-HHHHh--CChhhhccCccc-hhHhhcCC-----HHHHHHHHHcCC---CCCCCCCCCChHHH
Q psy229 45 PDSHLRAYTGYGINTLL-WYMQH--EPQTVLQYTHAA-TIQVAKGD-----KELVLSILAAGA---ALELKDGDGNTPLH 112 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~-~~~~~--~~~~~~~~~~~~-~~a~~~~~-----~~~~~~Ll~~~~---~~~~~~~~g~tpL~ 112 (142)
...+++.+...+...+. +.... ++...+..+.++ ++++..++ .++++.|+..|+ ..+.+|..|.||||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~ 152 (235)
T COG0666 73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLH 152 (235)
T ss_pred ccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhH
Confidence 44555666555555544 33333 445555556666 68888888 999999999999 67777999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 113 IAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 113 ~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+|+..|+.+++++|+..|++++.++..|.
T Consensus 153 ~A~~~~~~~~~~~ll~~~~~~~~~~~~g~ 181 (235)
T COG0666 153 WAALNGDADIVELLLEAGADPNSRNSYGV 181 (235)
T ss_pred HHHHcCchHHHHHHHhcCCCCcccccCCC
Confidence 99999999999999999999998877764
No 75
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.93 E-value=1.7e-08 Score=60.00 Aligned_cols=97 Identities=27% Similarity=0.368 Sum_probs=75.7
Q ss_pred CCCccccccccCChHHHHHHHHh-CC--hhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH-EP--QTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~-~~--~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...+...+...+.. .. ...+..+.++ +.++..+..++++.|+..+++++..+..+.||+|+|+..++
T Consensus 6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~ 85 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGN 85 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCc
Confidence 45678888887777765544444 22 2344444444 57888899999999999998888888999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g 140 (142)
.+++++|+.+|.+++..+..|
T Consensus 86 ~~~~~~L~~~~~~~~~~~~~~ 106 (126)
T cd00204 86 LDVVKLLLKHGADVNARDKDG 106 (126)
T ss_pred HHHHHHHHHcCCCCcccCCCC
Confidence 999999999998887777654
No 76
>KOG4214|consensus
Probab=98.93 E-value=1.8e-09 Score=60.66 Aligned_cols=62 Identities=24% Similarity=0.324 Sum_probs=55.2
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.++..+|..+-++..+..|.++|..- .|.+|||+|+-+|+.+++++|++.||+++.+|++|.
T Consensus 7 ~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygI 68 (117)
T KOG4214|consen 7 AWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGI 68 (117)
T ss_pred hhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCC
Confidence 46678899998988888888887653 899999999999999999999999999999999884
No 77
>KOG0510|consensus
Probab=98.90 E-value=8.3e-09 Score=77.37 Aligned_cols=96 Identities=25% Similarity=0.333 Sum_probs=65.2
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
..++++++.+.........+.. +....+.....+ |+|+..+..++++.|+..|+|+|..|..+.||||.||..++.
T Consensus 88 ~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~ 167 (929)
T KOG0510|consen 88 DNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKV 167 (929)
T ss_pred cCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChH
Confidence 4444555544444432222222 222333333333 678888888888888888888888888888899999988888
Q ss_pred HHHHHHHhCCCCcccccCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g 140 (142)
|..+.|+..|+++.-.|..|
T Consensus 168 E~~k~Li~~~a~~~K~~~~~ 187 (929)
T KOG0510|consen 168 EAKKELINKGADPCKSDIDG 187 (929)
T ss_pred HHHHHHHhcCCCCCcccCcC
Confidence 88888888888887666554
No 78
>PHA02792 ankyrin-like protein; Provisional
Probab=98.90 E-value=3.1e-09 Score=78.83 Aligned_cols=100 Identities=15% Similarity=0.068 Sum_probs=74.6
Q ss_pred CCCCccccccc--cCChH--HHHHHHHhCChhhhccCccc--hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q psy229 43 PRPDSHLRAYT--GYGIN--TLLWYMQHEPQTVLQYTHAA--TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ 116 (142)
Q Consensus 43 ~~~~~~l~~~~--~~~~~--~l~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~ 116 (142)
.++.+|+++-. +.... .+...+..+++....-+.+. ..+...++.|++++|+..|+++|.++..+.||+++|+.
T Consensus 35 ~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~ 114 (631)
T PHA02792 35 YDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKNGINIVEKYATT 114 (631)
T ss_pred cCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccCCCCcceeEeec
Confidence 34556666553 22222 24444445555444444444 36778999999999999999999999999999999965
Q ss_pred -cCCHHHHHHHHhCCCCcccccCCCCC
Q psy229 117 -NNSVSVTQALLGFGAEVNVSQIPYFP 142 (142)
Q Consensus 117 -~~~~~~~~~Ll~~ga~~~~~~~~g~~ 142 (142)
.++.|++++|+++||++...+..|++
T Consensus 115 ~~~~~eivk~Ll~~Gad~~~~~~~g~~ 141 (631)
T PHA02792 115 SNPNVDVFKLLLDKGIPTCSNIQYGYK 141 (631)
T ss_pred CCCChHHHHHHHHCCCCcccccccCcc
Confidence 69999999999999999888888764
No 79
>KOG3676|consensus
Probab=98.89 E-value=6.7e-09 Score=77.68 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=77.5
Q ss_pred CCCccccccccCChHHHHHHHHh---CCh-----------hh------------hccCccc-hhHhhcCCHHHHHHHHHc
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQ-----------TV------------LQYTHAA-TIQVAKGDKELVLSILAA 96 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~-----------~~------------~~~~~~~-~~a~~~~~~~~~~~Ll~~ 96 (142)
.+.++||.+..+....+..++.. ++. .. -+++..+ .+|+.-++.+++++|+.+
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~ 262 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH 262 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc
Confidence 36788888877776665555542 111 11 1223334 388999999999999999
Q ss_pred CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCC--cccccCCCC
Q psy229 97 GAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAE--VNVSQIPYF 141 (142)
Q Consensus 97 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~--~~~~~~~g~ 141 (142)
|+|++++|..|+|.||..+.+-..+|-.+++++|++ ...+|++|+
T Consensus 263 gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgL 309 (782)
T KOG3676|consen 263 GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGL 309 (782)
T ss_pred CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCC
Confidence 999999999999999999999899999999999999 888898886
No 80
>KOG0507|consensus
Probab=98.89 E-value=3.1e-09 Score=78.99 Aligned_cols=97 Identities=20% Similarity=0.125 Sum_probs=73.4
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+-+.+|.+.-+|...+..++.. -.+.++..+..+ |+|++.|+.+++++++..+..+|+.+-.|.||||.|+++||
T Consensus 48 ~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh 127 (854)
T KOG0507|consen 48 SGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGH 127 (854)
T ss_pred cchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcc
Confidence 34455555555555555555444 223334344444 79999999999999999998899999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g 140 (142)
.+.+.+|+.+|++.-.+|..+
T Consensus 128 ~dvv~~Ll~~~adp~i~nns~ 148 (854)
T KOG0507|consen 128 LEVVFYLLKKNADPFIRNNSK 148 (854)
T ss_pred hHHHHHHHhcCCCccccCccc
Confidence 999999999999998777653
No 81
>KOG0515|consensus
Probab=98.78 E-value=1.6e-08 Score=72.81 Aligned_cols=61 Identities=25% Similarity=0.336 Sum_probs=56.9
Q ss_pred HhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 81 QVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 81 a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|+-.|..++++..+..--|+...+..|.|+||-|...||.+||++|+..|++||+.|..||
T Consensus 557 aaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGW 617 (752)
T KOG0515|consen 557 AALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGW 617 (752)
T ss_pred hhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCC
Confidence 4557889999999988888988999999999999999999999999999999999999998
No 82
>KOG3676|consensus
Probab=98.72 E-value=3e-08 Score=74.27 Aligned_cols=69 Identities=35% Similarity=0.426 Sum_probs=60.9
Q ss_pred hccCccc-hhHhhcCCHHHHHHHHHcCCCCCCC---------C--------------CCCChHHHHHHHcCCHHHHHHHH
Q psy229 72 LQYTHAA-TIQVAKGDKELVLSILAAGAALELK---------D--------------GDGNTPLHIAAQNNSVSVTQALL 127 (142)
Q Consensus 72 ~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~---------~--------------~~g~tpL~~a~~~~~~~~~~~Ll 127 (142)
..++.++ |+|..+.+.+++++|+..|+|++++ | .+|..||.+|+..++.+|+++|+
T Consensus 181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl 260 (782)
T KOG3676|consen 181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL 260 (782)
T ss_pred hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence 3457776 8999999999999999999999843 1 25789999999999999999999
Q ss_pred hCCCCcccccCCC
Q psy229 128 GFGAEVNVSQIPY 140 (142)
Q Consensus 128 ~~ga~~~~~~~~g 140 (142)
++|||++++|..|
T Consensus 261 ~~gAd~~aqDS~G 273 (782)
T KOG3676|consen 261 AHGADPNAQDSNG 273 (782)
T ss_pred hcCCCCCccccCC
Confidence 9999999999987
No 83
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.65 E-value=4e-08 Score=75.47 Aligned_cols=98 Identities=13% Similarity=0.061 Sum_probs=73.0
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhh--------------hccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTV--------------LQYTHAA-TIQVAKGDKELVLSILAAGAALELKD 104 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~--------------~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~ 104 (142)
..+.+|++.++..++..+..++.. +++.. ...+.++ +.|+..++.+++++|++.|++++.+|
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d 205 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTAD 205 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHh
Confidence 357789999998888886666664 22211 0123444 58888999999999999999999999
Q ss_pred CCCChHHHHHHHcC---------CHHHHHHHHhCCCCc-------ccccCCC
Q psy229 105 GDGNTPLHIAAQNN---------SVSVTQALLGFGAEV-------NVSQIPY 140 (142)
Q Consensus 105 ~~g~tpL~~a~~~~---------~~~~~~~Ll~~ga~~-------~~~~~~g 140 (142)
..|+||||+|+..+ ...|.++++..++.. +..|..|
T Consensus 206 ~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g 257 (743)
T TIGR00870 206 SLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQG 257 (743)
T ss_pred hhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCC
Confidence 99999999999886 345677777776654 4456665
No 84
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.63 E-value=6.1e-08 Score=49.83 Aligned_cols=35 Identities=34% Similarity=0.528 Sum_probs=29.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 107 GNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 107 g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|.||||+|+..|+.++++.|+++|++++.+|..|.
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~ 35 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGR 35 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS-
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 68999999999999999999999999999998875
No 85
>KOG0506|consensus
Probab=98.62 E-value=4.8e-08 Score=69.50 Aligned_cols=84 Identities=23% Similarity=0.148 Sum_probs=69.2
Q ss_pred cccccccCChHH-HHHHHHh--CChhhhccCccc-hhHhhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcCCHHH
Q psy229 48 HLRAYTGYGINT-LLWYMQH--EPQTVLQYTHAA-TIQVAKGDKELVLSILAA-GAALELKDGDGNTPLHIAAQNNSVSV 122 (142)
Q Consensus 48 ~l~~~~~~~~~~-l~~~~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~tpL~~a~~~~~~~~ 122 (142)
.+..++..|..+ +..++.. +.+..+.-+++. |.|+..|+.+++++|+.. +.+++.+|+||+|||.-|.+.+|.++
T Consensus 509 ~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v 588 (622)
T KOG0506|consen 509 NVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEV 588 (622)
T ss_pred hhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHH
Confidence 345666666665 5544444 777788888887 799999999999999986 89999999999999999999999999
Q ss_pred HHHHHhCCC
Q psy229 123 TQALLGFGA 131 (142)
Q Consensus 123 ~~~Ll~~ga 131 (142)
+++|.+...
T Consensus 589 ~k~L~~~~~ 597 (622)
T KOG0506|consen 589 VKLLEEAQY 597 (622)
T ss_pred HHHHHHHhc
Confidence 999976543
No 86
>KOG0511|consensus
Probab=98.61 E-value=1e-07 Score=66.23 Aligned_cols=55 Identities=24% Similarity=0.264 Sum_probs=52.0
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCc
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEV 133 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~ 133 (142)
..||+.|..+.+++|++.|.++|+.|++.+.||.+|+.+||...+++|+++||--
T Consensus 41 ceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 41 CEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred HHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 4789999999999999999999999999999999999999999999999999743
No 87
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.58 E-value=5.4e-07 Score=53.46 Aligned_cols=67 Identities=34% Similarity=0.514 Sum_probs=58.4
Q ss_pred Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 75 THAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 75 ~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.++ +.|+..++.+++++|+..+.+.+..+..|.+|+++|+..+..+++++|+..|++++..+..|.
T Consensus 7 g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 74 (126)
T cd00204 7 GRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGN 74 (126)
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 3444 577889999999999999998888999999999999999999999999999988887776553
No 88
>KOG0514|consensus
Probab=98.56 E-value=1.9e-07 Score=64.69 Aligned_cols=85 Identities=21% Similarity=0.220 Sum_probs=68.0
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccch-hHhhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAAT-IQVAKGDKELVLSILAA-GAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~-~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
+.+.|.++...|...+.+++.. ++++.+.-+.+.. -|+.+||.|++++|+.. ++++...|..|.|+|..|...||
T Consensus 340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh 419 (452)
T KOG0514|consen 340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGH 419 (452)
T ss_pred cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCc
Confidence 4466677776776655544444 6777777777774 67779999999999987 78999999999999999999999
Q ss_pred HHHHHHHHhC
Q psy229 120 VSVTQALLGF 129 (142)
Q Consensus 120 ~~~~~~Ll~~ 129 (142)
.++.-+|..+
T Consensus 420 ~eIa~mlYa~ 429 (452)
T KOG0514|consen 420 REIAVMLYAH 429 (452)
T ss_pred hHHHHHHHHH
Confidence 9999888655
No 89
>KOG0705|consensus
Probab=98.51 E-value=3.8e-07 Score=66.43 Aligned_cols=59 Identities=25% Similarity=0.356 Sum_probs=54.9
Q ss_pred ccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy229 76 HAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVN 134 (142)
Q Consensus 76 ~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~ 134 (142)
++. |+|+..|+..+.++|+-+|+|+.++|.+|.|+|.||-+.|..+|+.+|+.+|+..+
T Consensus 662 rt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 662 RTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDE 721 (749)
T ss_pred cchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCcc
Confidence 444 79999999999999999999999999999999999999999999999999998654
No 90
>KOG0507|consensus
Probab=98.37 E-value=1.4e-06 Score=65.44 Aligned_cols=87 Identities=17% Similarity=0.125 Sum_probs=74.3
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
.++..++++++-.|...+.+++.. .++.....+.++ |.++..|+.+++.+|+.+++++-..++++.|+|..|++.|
T Consensus 80 ~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfg 159 (854)
T KOG0507|consen 80 TKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFG 159 (854)
T ss_pred ccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhh
Confidence 567788899998888876666554 445555556665 7999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhC
Q psy229 119 SVSVTQALLGF 129 (142)
Q Consensus 119 ~~~~~~~Ll~~ 129 (142)
..+++.+|++.
T Consensus 160 r~~Vvq~ll~~ 170 (854)
T KOG0507|consen 160 RAEVVQMLLQK 170 (854)
T ss_pred hhHHHHHHhhh
Confidence 99999999987
No 91
>KOG0818|consensus
Probab=98.36 E-value=9.1e-07 Score=63.53 Aligned_cols=63 Identities=29% Similarity=0.425 Sum_probs=51.7
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCC-CCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDG-DGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|..+..++.+..-.|+..|+++|-.+. .|.||||.|+..|+..-+++|+-+||++++.|.+|.
T Consensus 138 hasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~Gm 201 (669)
T KOG0818|consen 138 HSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGM 201 (669)
T ss_pred HHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCC
Confidence 566678888888888888888877654 588899999998888888888888999888888873
No 92
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.32 E-value=3.8e-06 Score=54.83 Aligned_cols=63 Identities=40% Similarity=0.550 Sum_probs=56.1
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC-----HHHHHHHHhCCC---CcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS-----VSVTQALLGFGA---EVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~-----~~~~~~Ll~~ga---~~~~~~~~g~ 141 (142)
+.++..+..+++..++..+++++.++..|.||||+|+..++ .++++.|+..|+ ..+.+|..|.
T Consensus 78 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~ 148 (235)
T COG0666 78 HSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN 148 (235)
T ss_pred HHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCC
Confidence 57777899999999999999999999999999999999999 999999999999 5555577664
No 93
>KOG4369|consensus
Probab=98.10 E-value=5.6e-06 Score=65.08 Aligned_cols=110 Identities=21% Similarity=0.199 Sum_probs=72.8
Q ss_pred hcccccCChHHHhhCCCCCc-----------cccccccCChHH-HHHHHHhCChhhhccCccc----hhHhhcCCHHHHH
Q psy229 28 TWQDTRCDHAYLTSLPRPDS-----------HLRAYTGYGINT-LLWYMQHEPQTVLQYTHAA----TIQVAKGDKELVL 91 (142)
Q Consensus 28 ~~~~~~~~~~~~~~l~~~~~-----------~l~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~----~~a~~~~~~~~~~ 91 (142)
+.+......++++.+...+. ++-.++..|+.. +..+++.+.+.....+++. .++|..|+.++++
T Consensus 762 T~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vve 841 (2131)
T KOG4369|consen 762 TSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVE 841 (2131)
T ss_pred cccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHH
Confidence 34444455555555544433 333444444443 3333343333322223332 4788899999999
Q ss_pred HHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccc
Q psy229 92 SILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQ 137 (142)
Q Consensus 92 ~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~ 137 (142)
+|+..|++-..++...+|||..|..-|+.+++..|+..|++|+.+.
T Consensus 842 lLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrt 887 (2131)
T KOG4369|consen 842 LLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRT 887 (2131)
T ss_pred HHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccccc
Confidence 9999999888888889999999999999999999999998887653
No 94
>KOG0522|consensus
Probab=98.05 E-value=7.7e-06 Score=59.23 Aligned_cols=61 Identities=23% Similarity=0.331 Sum_probs=50.2
Q ss_pred hhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhC
Q psy229 69 QTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGF 129 (142)
Q Consensus 69 ~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ 129 (142)
+..+..+.++ |+|+..|+.+.++.|+..|+++..+++.|++|||.|+..|+.+++..++.+
T Consensus 49 d~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 49 DRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred ccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 3334444554 789999999999999999999999999999999999999998887777654
No 95
>KOG0506|consensus
Probab=98.03 E-value=4.4e-06 Score=59.87 Aligned_cols=62 Identities=27% Similarity=0.269 Sum_probs=58.2
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhC-CCCcccccCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGF-GAEVNVSQIPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~-ga~~~~~~~~g 140 (142)
.+|+..|....++.+...|.|++.+|....|+||.|+..|+.+++++|++. +.+++.+|+.|
T Consensus 511 ~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~ 573 (622)
T KOG0506|consen 511 MYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWG 573 (622)
T ss_pred hhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccC
Confidence 488999999999999999999999999999999999999999999999998 68999988876
No 96
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=97.93 E-value=2.4e-05 Score=35.77 Aligned_cols=30 Identities=20% Similarity=0.437 Sum_probs=25.9
Q ss_pred ccc-hhHhhcCCHHHHHHHHHcCCCCCCCCC
Q psy229 76 HAA-TIQVAKGDKELVLSILAAGAALELKDG 105 (142)
Q Consensus 76 ~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 105 (142)
.++ |+|+..++.+++++|+..|++++.+|.
T Consensus 3 ~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 3 NTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp BBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred ccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 444 688999999999999999999998763
No 97
>KOG0818|consensus
Probab=97.93 E-value=4.6e-05 Score=55.13 Aligned_cols=55 Identities=18% Similarity=0.238 Sum_probs=49.0
Q ss_pred Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhC
Q psy229 75 THAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGF 129 (142)
Q Consensus 75 ~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ 129 (142)
+.++ |.|+..|+..=+++|.-+|+|++++|..|.||+.+|-+.||.++.+-|++.
T Consensus 167 g~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 167 GNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence 4444 799999999999999999999999999999999999999999988877653
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=97.89 E-value=2.3e-05 Score=35.09 Aligned_cols=24 Identities=25% Similarity=0.459 Sum_probs=21.8
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALEL 102 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~ 102 (142)
++|+..|+.+++++|++.|+++|.
T Consensus 7 h~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 7 HLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred HHHHHhCCHHHHHHHHHcCCCCCC
Confidence 688999999999999999999874
No 99
>KOG0522|consensus
Probab=97.86 E-value=4.7e-05 Score=55.31 Aligned_cols=45 Identities=29% Similarity=0.490 Sum_probs=42.1
Q ss_pred CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 97 GAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 97 ~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
...++..|..|.||||.|+..|+.+.++.|+..||++.++|++||
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gW 89 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGW 89 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccc
Confidence 446778899999999999999999999999999999999999998
No 100
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.82 E-value=5.2e-05 Score=32.55 Aligned_cols=29 Identities=52% Similarity=0.864 Sum_probs=26.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy229 106 DGNTPLHIAAQNNSVSVTQALLGFGAEVN 134 (142)
Q Consensus 106 ~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~ 134 (142)
.|.||+|+++..++.++++.|+..|.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 37899999999999999999999998764
No 101
>KOG0521|consensus
Probab=97.71 E-value=3.9e-05 Score=59.17 Aligned_cols=62 Identities=32% Similarity=0.398 Sum_probs=58.1
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|.|+..+..-+.++|+..|+++|..|..|.+|+|.+...|+...+..|+.+|++.++.+..|
T Consensus 661 h~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~ 722 (785)
T KOG0521|consen 661 HVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDG 722 (785)
T ss_pred hhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccC
Confidence 78888999999999999999999999999999999999999999999999999999888765
No 102
>KOG1710|consensus
Probab=97.69 E-value=0.00021 Score=48.66 Aligned_cols=89 Identities=18% Similarity=0.116 Sum_probs=68.2
Q ss_pred hhCCCCCccccccccCChHHHHHHHHh-CChhhhcc---Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q psy229 40 TSLPRPDSHLRAYTGYGINTLLWYMQH-EPQTVLQY---THAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIA 114 (142)
Q Consensus 40 ~~l~~~~~~l~~~~~~~~~~l~~~~~~-~~~~~~~~---~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a 114 (142)
..-+.+.+++.-++..|...+..++.. ..+.-+.. +=++ ++|+-.|+.++.++|++.|+.++..+.-|.|+-..|
T Consensus 40 ~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmA 119 (396)
T KOG1710|consen 40 QRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMA 119 (396)
T ss_pred ccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHH
Confidence 445678889988888888875555554 22221111 1222 588889999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHh
Q psy229 115 AQNNSVSVTQALLG 128 (142)
Q Consensus 115 ~~~~~~~~~~~Ll~ 128 (142)
+.-|+.+||.++-.
T Consensus 120 AFVG~H~CV~iINN 133 (396)
T KOG1710|consen 120 AFVGHHECVAIINN 133 (396)
T ss_pred HHhcchHHHHHHhc
Confidence 99999999987743
No 103
>KOG4369|consensus
Probab=97.69 E-value=2.7e-05 Score=61.43 Aligned_cols=58 Identities=36% Similarity=0.466 Sum_probs=46.3
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccc
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVS 136 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~ 136 (142)
.+++..|+.+++.+|+.+.+++..+-..|.|||+-+++.|.+++-++|+..|||+++.
T Consensus 931 tla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nas 988 (2131)
T KOG4369|consen 931 TLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNAS 988 (2131)
T ss_pred eeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccC
Confidence 4677778888888888877777777778888888888888888888888888888753
No 104
>KOG0782|consensus
Probab=97.64 E-value=6.1e-05 Score=55.50 Aligned_cols=62 Identities=31% Similarity=0.406 Sum_probs=52.3
Q ss_pred hhHhhcCCHHHHHHHHHcCCC--CCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAA--LELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~--~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
|+|+..|+.++++++++.|.. .+..|..|.|+||.|+.+++..++.+|++.|+++.--|..|
T Consensus 904 h~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg 967 (1004)
T KOG0782|consen 904 HYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKG 967 (1004)
T ss_pred HHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCC
Confidence 588889999999999998764 56677889999999999999999999999999887666554
No 105
>KOG3609|consensus
Probab=97.45 E-value=0.00069 Score=52.02 Aligned_cols=87 Identities=21% Similarity=0.116 Sum_probs=57.5
Q ss_pred CccccccccCChHHHHHHHHhCChhhhccCccchhHhhcCCHHHHHHHHHcCCCCC----------CCCCCCChHHHHHH
Q psy229 46 DSHLRAYTGYGINTLLWYMQHEPQTVLQYTHAATIQVAKGDKELVLSILAAGAALE----------LKDGDGNTPLHIAA 115 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~Ll~~~~~~~----------~~~~~g~tpL~~a~ 115 (142)
...+..+..+.+..+..++...+... +....+|...|..++++.++....... ..-..+-||+..|+
T Consensus 63 r~al~iai~nenle~~eLLl~~~~~~---gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAA 139 (822)
T KOG3609|consen 63 RLALHIAIDNENLELQELLLDTSSEE---GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAA 139 (822)
T ss_pred hhceecccccccHHHHHHHhcCcccc---chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHH
Confidence 33444455555555554444422111 333357888999999999987532221 12235679999999
Q ss_pred HcCCHHHHHHHHhCCCCccc
Q psy229 116 QNNSVSVTQALLGFGAEVNV 135 (142)
Q Consensus 116 ~~~~~~~~~~Ll~~ga~~~~ 135 (142)
..++.||+++|+.+|+.+..
T Consensus 140 h~NnyEil~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 140 HLNNFEILQCLLTRGHCIPI 159 (822)
T ss_pred HhcchHHHHHHHHcCCCCCC
Confidence 99999999999999998854
No 106
>KOG2505|consensus
Probab=97.44 E-value=0.00038 Score=50.52 Aligned_cols=56 Identities=14% Similarity=0.014 Sum_probs=47.1
Q ss_pred HHHHHHHHHcCCCCC------CCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCCC
Q psy229 87 KELVLSILAAGAALE------LKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYFP 142 (142)
Q Consensus 87 ~~~~~~Ll~~~~~~~------~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~~ 142 (142)
...+++|...+.+.| ..+..-.|+||+|+.+|...|+.+||+.|+|+..+|..|.|
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grt 465 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRT 465 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCC
Confidence 567888888876654 33445679999999999999999999999999999999875
No 107
>KOG0520|consensus
Probab=97.06 E-value=0.00018 Score=56.06 Aligned_cols=89 Identities=19% Similarity=0.158 Sum_probs=58.3
Q ss_pred CccccccccCChHHHHHHHHhC----ChhhhccCccchhHhhcCCHHHHHHHHH-cCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 46 DSHLRAYTGYGINTLLWYMQHE----PQTVLQYTHAATIQVAKGDKELVLSILA-AGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~~----~~~~~~~~~~~~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
.+-+++.+..++.-+...+... ....+..+..-...|..++.++.-+|+. .|..++.+|..|+||||+|+..|+.
T Consensus 575 ~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e 654 (975)
T KOG0520|consen 575 MLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGRE 654 (975)
T ss_pred hHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHH
Confidence 3444555555555444333331 1222222222223366666676655554 5788999999999999999999999
Q ss_pred HHHHHHHhCCCCcc
Q psy229 121 SVTQALLGFGAEVN 134 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~ 134 (142)
.++..|++-|++..
T Consensus 655 ~l~a~l~~lga~~~ 668 (975)
T KOG0520|consen 655 KLVASLIELGADPG 668 (975)
T ss_pred HHHHHHHHhccccc
Confidence 99999998888765
No 108
>KOG0782|consensus
Probab=96.90 E-value=0.0022 Score=47.72 Aligned_cols=84 Identities=19% Similarity=0.225 Sum_probs=64.3
Q ss_pred ccccccccCChHHHHHHHH-h-CChhhhccCccc----hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 47 SHLRAYTGYGINTLLWYMQ-H-EPQTVLQYTHAA----TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 47 ~~l~~~~~~~~~~l~~~~~-~-~~~~~~~~~~~~----~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.+|.++..|.-.+..++. . .++.++..+.++ |-|+..++..+..+|++.|+.....|..|.||-.-|-+.+..
T Consensus 901 sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~ 980 (1004)
T KOG0782|consen 901 SLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDP 980 (1004)
T ss_pred hHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCCc
Confidence 4456666666666444444 3 344555555554 567788888999999999999989999999999999999999
Q ss_pred HHHHHHHhCC
Q psy229 121 SVTQALLGFG 130 (142)
Q Consensus 121 ~~~~~Ll~~g 130 (142)
++..+|-++.
T Consensus 981 dlaayle~rq 990 (1004)
T KOG0782|consen 981 DLAAYLESRQ 990 (1004)
T ss_pred hHHHHHhhhh
Confidence 9999997664
No 109
>KOG2384|consensus
Probab=96.85 E-value=0.008 Score=38.72 Aligned_cols=51 Identities=18% Similarity=0.264 Sum_probs=41.8
Q ss_pred hHhhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCC
Q psy229 80 IQVAKGDKELVLSILAAG-AALELKDGDGNTPLHIAAQNNSVSVTQALLGFG 130 (142)
Q Consensus 80 ~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~g 130 (142)
.|+..|+.+.+.+|+.+| +.+...|.++.+++.+|-..|..+.+..|.+.-
T Consensus 18 caa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 18 CAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred HHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 345567888888998888 678888888999998998888888888887763
No 110
>KOG0705|consensus
Probab=96.84 E-value=0.0025 Score=47.32 Aligned_cols=61 Identities=31% Similarity=0.460 Sum_probs=47.3
Q ss_pred HhhcCCHHHHHHHHHcCCC--CCC--CCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 81 QVAKGDKELVLSILAAGAA--LEL--KDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 81 a~~~~~~~~~~~Ll~~~~~--~~~--~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|+.......+-+|+.+|-. ++. -+..|.|+||.||..|+..+..+|+=+|+++.++|.+|.
T Consensus 631 A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~ 695 (749)
T KOG0705|consen 631 AVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGR 695 (749)
T ss_pred HHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCc
Confidence 3444555666777777642 332 344679999999999999999999999999999999874
No 111
>KOG0521|consensus
Probab=96.51 E-value=0.0044 Score=48.34 Aligned_cols=97 Identities=20% Similarity=0.208 Sum_probs=75.5
Q ss_pred cccCChHHHhhCCCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCC
Q psy229 31 DTRCDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGD 106 (142)
Q Consensus 31 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 106 (142)
..+|+.+....+..+.+.+|.+...+...+..++.. +.+..+..++++ |.+...|+......|+++|++.++.+..
T Consensus 642 ~~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~ 721 (785)
T KOG0521|consen 642 AHGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPD 721 (785)
T ss_pred cchhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCcc
Confidence 345556666666677889999998888877766665 455556666666 6788899999999999999999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHH
Q psy229 107 GNTPLHIAAQNNSVSVTQALL 127 (142)
Q Consensus 107 g~tpL~~a~~~~~~~~~~~Ll 127 (142)
|.+|+.+|....+.+.+.++.
T Consensus 722 ~~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 722 GKLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred CcchhhHHhhhccccHHHHHh
Confidence 999999998876666655554
No 112
>KOG0783|consensus
Probab=95.09 E-value=0.05 Score=42.68 Aligned_cols=72 Identities=24% Similarity=0.369 Sum_probs=53.7
Q ss_pred CCccccccccCChHH-HHHHHHhCChhhhcc---Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q psy229 45 PDSHLRAYTGYGINT-LLWYMQHEPQTVLQY---THAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ 116 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~-l~~~~~~~~~~~~~~---~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~ 116 (142)
+.+.+|.+...+... +.|++.+..+..-.- +-++ |-|...|+.+|+-.|+..|.....+|..|..||...+.
T Consensus 52 GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r 128 (1267)
T KOG0783|consen 52 GRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR 128 (1267)
T ss_pred ccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence 667788777666665 667766644332222 2222 56778999999999999999999999999999998776
No 113
>KOG2505|consensus
Probab=94.99 E-value=0.018 Score=42.21 Aligned_cols=46 Identities=28% Similarity=0.363 Sum_probs=38.6
Q ss_pred hhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q psy229 70 TVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAA 115 (142)
Q Consensus 70 ~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~ 115 (142)
..+.+..+. |+|+..|..+++.+|+..|+|+..+|..|.||...+.
T Consensus 425 ~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 425 ANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred ccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 334444444 7999999999999999999999999999999988765
No 114
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.59 E-value=0.15 Score=34.02 Aligned_cols=51 Identities=20% Similarity=0.253 Sum_probs=42.4
Q ss_pred hcCCHHHHHHHHHcC-CCCCC---CCCCCChHHHHHHHcCCHHHHHHHHhCCCCc
Q psy229 83 AKGDKELVLSILAAG-AALEL---KDGDGNTPLHIAAQNNSVSVTQALLGFGAEV 133 (142)
Q Consensus 83 ~~~~~~~~~~Ll~~~-~~~~~---~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~ 133 (142)
...+..+++.++.+| +++|. +-+.|.|-|.-|...+..+++.+|+.+||-.
T Consensus 226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAIS 280 (284)
T ss_pred cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCccc
Confidence 355667889999998 46764 4578999999999999999999999999843
No 115
>KOG0511|consensus
Probab=91.12 E-value=0.48 Score=34.11 Aligned_cols=68 Identities=19% Similarity=0.236 Sum_probs=42.8
Q ss_pred ccccccCChHH-HHHHHHh--CChhhhccCccch-hHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc
Q psy229 49 LRAYTGYGINT-LLWYMQH--EPQTVLQYTHAAT-IQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQN 117 (142)
Q Consensus 49 l~~~~~~~~~~-l~~~~~~--~~~~~~~~~~~~~-~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~ 117 (142)
+.-+.+.|... +.++... +++..+.++.++. +|+--||...+++|+++|+-...-.-.|.. .||++.+
T Consensus 40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~R-C~YgaLn 111 (516)
T KOG0511|consen 40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDR-CHYGALN 111 (516)
T ss_pred HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcch-hhhhhhh
Confidence 33444555554 3333333 5666777777773 677789999999999999866443344543 3555554
No 116
>KOG3609|consensus
Probab=88.36 E-value=0.69 Score=36.44 Aligned_cols=75 Identities=17% Similarity=0.071 Sum_probs=55.2
Q ss_pred cccccCChHH-HHHHHHh------CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHH
Q psy229 50 RAYTGYGINT-LLWYMQH------EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVS 121 (142)
Q Consensus 50 ~~~~~~~~~~-l~~~~~~------~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~ 121 (142)
-.+.+.|..+ +...+.. +.++.+.+++++ ++|..+.+.++.++|++.+... | -+|.+|...|..+
T Consensus 30 L~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~------g-dALL~aI~~~~v~ 102 (822)
T KOG3609|consen 30 LLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE------G-DALLLAIAVGSVP 102 (822)
T ss_pred HHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc------c-hHHHHHHHHHHHH
Confidence 3445556655 4444443 566778888887 5788899999999999876544 3 4788899999999
Q ss_pred HHHHHHhCCC
Q psy229 122 VTQALLGFGA 131 (142)
Q Consensus 122 ~~~~Ll~~ga 131 (142)
+|++++.+-.
T Consensus 103 ~VE~ll~~~~ 112 (822)
T KOG3609|consen 103 LVELLLVHFV 112 (822)
T ss_pred HHHHHHhccc
Confidence 9999998743
No 117
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=61.12 E-value=28 Score=22.77 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=28.6
Q ss_pred hHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHh
Q psy229 80 IQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLG 128 (142)
Q Consensus 80 ~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~ 128 (142)
.|+.+|-..++.-.++.|.+++. +.|..|+..++..++.+++.
T Consensus 149 ~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi~ 191 (192)
T PF03158_consen 149 KAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFIR 191 (192)
T ss_pred HHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhhc
Confidence 56667777766666666655432 57777777777777776654
No 118
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=60.66 E-value=23 Score=19.13 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=30.9
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGF 129 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ 129 (142)
..|...|+.|+++.+++.+ .++ ...+..|...-+.++++.|++.
T Consensus 11 ~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 11 EYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 3667788888888887644 121 3467778777778888888765
No 119
>KOG2384|consensus
Probab=58.99 E-value=12 Score=24.57 Aligned_cols=59 Identities=12% Similarity=0.086 Sum_probs=33.4
Q ss_pred ccccccccCChHH-HHHHHHhC---ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCC
Q psy229 47 SHLRAYTGYGINT-LLWYMQHE---PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDG 105 (142)
Q Consensus 47 ~~l~~~~~~~~~~-l~~~~~~~---~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 105 (142)
+++..++..|..+ +.+++... +...+..+.+. .+|-..|..+++..|-+.-.+....+.
T Consensus 14 Talmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~n 77 (223)
T KOG2384|consen 14 TALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMN 77 (223)
T ss_pred hHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCccc
Confidence 4455555555554 44555543 33333333333 366678999999999887555444443
No 120
>KOG1709|consensus
Probab=48.58 E-value=20 Score=24.29 Aligned_cols=19 Identities=16% Similarity=0.406 Sum_probs=10.6
Q ss_pred hHhhcCCHHHHHHHHHcCC
Q psy229 80 IQVAKGDKELVLSILAAGA 98 (142)
Q Consensus 80 ~a~~~~~~~~~~~Ll~~~~ 98 (142)
+|..+++.+..+.|++.|+
T Consensus 21 ~a~ern~~rly~~lv~~gv 39 (271)
T KOG1709|consen 21 LALERNQSRLYRRLVEAGV 39 (271)
T ss_pred HHHHccHHHHHHHHHHcCC
Confidence 5555555555555555554
No 121
>KOG0520|consensus
Probab=46.54 E-value=43 Score=27.75 Aligned_cols=62 Identities=18% Similarity=0.177 Sum_probs=45.9
Q ss_pred CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCC------CCCCCCCChHHHHHHHcCCHHHHHHHHh
Q psy229 67 EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAAL------ELKDGDGNTPLHIAAQNNSVSVTQALLG 128 (142)
Q Consensus 67 ~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~------~~~~~~g~tpL~~a~~~~~~~~~~~Ll~ 128 (142)
..++.+..+.++ ++|+.+|+..++..|+..|++. ...+..|.|+-..|...|+..+..+|-+
T Consensus 633 ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse 701 (975)
T KOG0520|consen 633 AIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE 701 (975)
T ss_pred ccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence 445556666666 7999999999999999766543 3334568899999988888887766643
No 122
>KOG3836|consensus
Probab=42.31 E-value=8.5 Score=29.63 Aligned_cols=46 Identities=30% Similarity=0.419 Sum_probs=35.7
Q ss_pred HHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCc
Q psy229 88 ELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEV 133 (142)
Q Consensus 88 ~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~ 133 (142)
..+-.|++.+..++..|..+.+|+|+++.-|..++.+.++.--.+.
T Consensus 410 s~v~~lik~~~~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~~~~ 455 (605)
T KOG3836|consen 410 SLVFTLIKKGAHPNDDDKFGFTPLHIPQISGDPRIIQLLLNCKVAI 455 (605)
T ss_pred cceeeeecccCccchhcccccccccccCCCCCHHHhhhhhhhhhhh
Confidence 3444556677888889999999999999999999988886554333
No 123
>PF04405 ScdA_N: Domain of Unknown function (DUF542) ; InterPro: IPR007500 This is a domain of unknown function found at the N terminus of genes involved in cell wall development and nitrous oxide protection. ScdA is required for normal cell growth and development; mutants have an increased level of peptidoglycan cross-linking and aberrant cellular morphology suggesting a role for ScdA in cell wall metabolism []. NorA1, NorA2, and YtfE are involved in the nitrous oxide response. NorA1 and NorA2, which are similar to YtfE, are co-transcribed with the membrane-bound nitrous oxide (NO) reductases. The genes appear to be involved in NO protection but their function is unknown [, ].
Probab=33.51 E-value=73 Score=16.26 Aligned_cols=39 Identities=15% Similarity=0.163 Sum_probs=27.1
Q ss_pred cCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHH
Q psy229 84 KGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQA 125 (142)
Q Consensus 84 ~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~ 125 (142)
..++...+.|-..|+|. ...|..+|..|+.....+.-++
T Consensus 10 ~~~p~~a~vf~~~gIDf---CCgG~~~L~eA~~~~~ld~~~v 48 (56)
T PF04405_consen 10 AEDPRAARVFRKYGIDF---CCGGNRSLEEACEEKGLDPEEV 48 (56)
T ss_pred HHChHHHHHHHHcCCcc---cCCCCchHHHHHHHcCCCHHHH
Confidence 34556677777888876 3578889999988766554333
No 124
>PF08902 DUF1848: Domain of unknown function (DUF1848); InterPro: IPR014998 This group of proteins are functionally uncharacterised. The C terminus contains a cluster of cysteines that are similar to the iron-sulphur cluster found at the N terminus of IPR007197 from INTERPRO.
Probab=28.11 E-value=27 Score=24.26 Aligned_cols=10 Identities=30% Similarity=0.753 Sum_probs=8.7
Q ss_pred CccceeecCC
Q psy229 1 MHGIVLWRSP 10 (142)
Q Consensus 1 ~~~~~~~~~~ 10 (142)
+|++|||.+|
T Consensus 48 Vd~iVFWTKn 57 (266)
T PF08902_consen 48 VDCIVFWTKN 57 (266)
T ss_pred ceEEEEecCC
Confidence 5789999988
Done!