Query psy229
Match_columns 142
No_of_seqs 116 out of 1118
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 20:54:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.8 2E-19 6.7E-24 113.3 8.4 111 31-141 12-137 (169)
2 4gpm_A Engineered protein OR26 99.7 2.3E-17 7.8E-22 103.9 8.1 93 43-135 68-164 (169)
3 3aaa_C Myotrophin, protein V-1 99.7 3.7E-17 1.3E-21 97.5 8.0 98 44-141 6-107 (123)
4 1n0q_A 3ANK, 3 ankyrin repeats 99.7 8.3E-17 2.8E-21 91.5 7.9 88 45-132 2-93 (93)
5 3c5r_A BARD-1, BRCA1-associate 99.7 1E-16 3.4E-21 97.2 7.9 99 43-141 8-110 (137)
6 2l6b_A NR1C; ankyrin, consensu 99.7 3.8E-17 1.3E-21 96.3 5.7 100 43-142 7-110 (115)
7 1d9s_A Cyclin-dependent kinase 99.7 1.6E-16 5.6E-21 96.3 8.2 96 44-140 11-111 (136)
8 3twr_A Tankyrase-2; ankyrin re 99.7 4.9E-16 1.7E-20 96.9 9.5 98 44-141 41-142 (165)
9 4b93_B Ankyrin repeat domain-c 99.7 1.5E-16 5.2E-21 106.9 7.6 75 67-141 144-219 (269)
10 2jab_A H10-2-G3; HER2, darpin, 99.7 3E-16 1E-20 95.1 7.8 98 44-141 13-114 (136)
11 3f6q_A Integrin-linked protein 99.7 7.2E-16 2.5E-20 97.4 9.5 99 43-141 37-139 (179)
12 1awc_B Protein (GA binding pro 99.7 4.5E-16 1.6E-20 96.0 8.3 99 43-141 32-134 (153)
13 1bi7_B P16INK4A, MTS1, multipl 99.6 6.1E-16 2.1E-20 95.8 8.2 96 44-140 44-144 (156)
14 2y1l_E Darpin-8.4; hydrolase-i 99.6 6.3E-16 2.1E-20 96.9 8.1 98 44-141 46-147 (169)
15 3v30_A DNA-binding protein rfx 99.6 1.1E-15 3.8E-20 95.9 9.2 99 43-141 34-136 (172)
16 3v31_A Ankyrin repeat family A 99.6 1.5E-15 5.1E-20 94.8 8.9 99 43-141 34-136 (167)
17 1oy3_D Transcription factor in 99.6 1.3E-15 4.4E-20 102.1 8.5 99 43-141 156-259 (282)
18 3ehr_A Osteoclast-stimulating 99.6 6.6E-16 2.3E-20 100.7 6.9 98 44-141 72-174 (222)
19 3ui2_A Signal recognition part 99.6 1.1E-15 3.9E-20 101.2 8.0 98 44-141 44-145 (244)
20 3deo_A Signal recognition part 99.6 9.9E-16 3.4E-20 97.2 7.4 98 44-141 43-144 (183)
21 1bi7_B P16INK4A, MTS1, multipl 99.6 1E-15 3.5E-20 94.8 7.3 100 42-141 9-112 (156)
22 2rfm_A Putative ankyrin repeat 99.6 2.4E-15 8.3E-20 95.9 9.1 98 44-141 67-168 (192)
23 1ikn_D Protein (I-kappa-B-alph 99.6 4.7E-15 1.6E-19 97.3 10.3 110 32-141 54-185 (236)
24 1ycs_B 53BP2, P53BP2; ankyrin 99.6 9E-16 3.1E-20 101.3 6.8 97 45-141 37-137 (239)
25 1n0r_A 4ANK, 4 ankyrin repeats 99.6 3.5E-15 1.2E-19 88.7 8.7 54 79-132 73-126 (126)
26 1n0q_A 3ANK, 3 ankyrin repeats 99.6 2.9E-15 9.9E-20 85.0 7.9 63 79-141 7-69 (93)
27 3v31_A Ankyrin repeat family A 99.6 3.9E-15 1.3E-19 92.9 9.1 98 44-141 2-103 (167)
28 4b93_B Ankyrin repeat domain-c 99.6 2.4E-15 8.1E-20 101.1 8.2 104 38-141 68-186 (269)
29 1ihb_A P18-INK4C(INK6), cyclin 99.6 9E-15 3.1E-19 90.7 9.2 97 44-141 37-138 (162)
30 1bd8_A P19INK4D CDK4/6 inhibit 99.6 1.3E-14 4.4E-19 89.5 9.8 97 43-141 34-134 (156)
31 1d9s_A Cyclin-dependent kinase 99.6 6.1E-15 2.1E-19 89.3 8.0 89 43-132 43-136 (136)
32 3t8k_A Uncharacterized protein 99.6 3.2E-15 1.1E-19 95.4 7.1 74 67-140 67-154 (186)
33 2vge_A RELA-associated inhibit 99.6 5.3E-15 1.8E-19 97.2 8.2 98 44-141 20-122 (229)
34 4hbd_A KN motif and ankyrin re 99.6 3.5E-15 1.2E-19 100.5 6.8 69 73-141 181-251 (276)
35 3aji_A 26S proteasome non-ATPa 99.6 1.2E-14 4.3E-19 94.9 9.2 97 45-141 106-206 (231)
36 3f6q_A Integrin-linked protein 99.6 1.4E-14 4.7E-19 91.5 8.9 98 44-141 4-106 (179)
37 2rfm_A Putative ankyrin repeat 99.6 7.3E-15 2.5E-19 93.7 7.5 99 43-141 33-135 (192)
38 1yyh_A HN1;, notch 1, ankyrin 99.6 6.7E-15 2.3E-19 97.7 7.4 73 69-141 151-224 (253)
39 1k1a_A B-cell lymphoma 3-encod 99.6 1.3E-14 4.6E-19 95.1 8.7 97 45-141 116-217 (241)
40 2dzn_A Probable 26S proteasome 99.6 1.2E-14 4.2E-19 94.6 8.5 97 45-141 107-209 (228)
41 3v30_A DNA-binding protein rfx 99.6 3E-14 1E-18 89.2 9.6 96 46-141 3-103 (172)
42 1bd8_A P19INK4D CDK4/6 inhibit 99.6 9.7E-15 3.3E-19 90.1 6.9 96 45-141 2-102 (156)
43 2f8y_A Notch homolog 1, transl 99.6 2.6E-14 8.7E-19 92.9 9.1 96 45-140 92-191 (223)
44 3utm_A Tankyrase-1; tankyrase, 99.6 2.4E-14 8.4E-19 98.4 9.5 98 44-141 210-314 (351)
45 3b7b_A Euchromatic histone-lys 99.6 2.2E-14 7.5E-19 94.0 8.8 97 45-141 111-211 (237)
46 2y1l_E Darpin-8.4; hydrolase-i 99.5 2.2E-14 7.7E-19 89.7 8.2 98 44-141 13-114 (169)
47 1sw6_A Regulatory protein SWI6 99.5 7.4E-15 2.5E-19 101.1 6.3 110 32-141 140-317 (327)
48 3ljn_A Hypothetical protein; a 99.5 1.7E-14 5.7E-19 100.3 8.0 97 45-141 138-245 (364)
49 3jue_A Arfgap with coiled-coil 99.5 2.1E-14 7.3E-19 100.3 8.5 96 46-141 200-302 (368)
50 3twr_A Tankyrase-2; ankyrin re 99.5 2.2E-14 7.4E-19 89.3 7.7 96 46-141 9-109 (165)
51 2xai_A ASB-9, ankyrin repeat a 99.5 2.6E-14 8.9E-19 95.3 8.5 96 45-141 101-200 (261)
52 1s70_B 130 kDa myosin-binding 99.5 1.5E-14 5.2E-19 97.8 7.4 97 45-141 40-140 (299)
53 1awc_B Protein (GA binding pro 99.5 1.4E-14 4.9E-19 89.2 6.6 96 46-141 3-101 (153)
54 1n11_A Ankyrin; clathrin, BAND 99.5 1.9E-14 6.5E-19 102.1 8.1 95 47-141 280-378 (437)
55 2rfa_A Transient receptor pote 99.5 4.1E-14 1.4E-18 92.5 9.1 98 44-141 36-155 (232)
56 1ihb_A P18-INK4C(INK6), cyclin 99.5 1.5E-14 5E-19 89.7 6.4 96 45-141 5-104 (162)
57 3lvq_E ARF-GAP with SH3 domain 99.5 3.5E-14 1.2E-18 102.7 9.0 95 44-138 170-271 (497)
58 1yyh_A HN1;, notch 1, ankyrin 99.5 1.8E-14 6.1E-19 95.6 6.5 69 73-141 122-191 (253)
59 3hra_A Ankyrin repeat family p 99.5 8.1E-14 2.8E-18 89.2 9.2 97 45-141 72-179 (201)
60 1dcq_A PYK2-associated protein 99.5 5.2E-14 1.8E-18 95.0 8.7 67 75-141 169-239 (278)
61 1s70_B 130 kDa myosin-binding 99.5 8.4E-15 2.9E-19 99.1 4.8 63 79-141 204-266 (299)
62 3kea_A K1L; tropism, ANK repea 99.5 2.8E-14 9.4E-19 96.5 7.1 98 43-140 29-128 (285)
63 2etb_A Transient receptor pote 99.5 2.2E-14 7.6E-19 95.2 6.5 98 44-141 89-222 (256)
64 1oy3_D Transcription factor in 99.5 8.1E-14 2.8E-18 93.3 9.1 68 74-141 157-226 (282)
65 3jxi_A Vanilloid receptor-rela 99.5 2.2E-14 7.6E-19 95.3 6.3 98 44-141 92-226 (260)
66 2etb_A Transient receptor pote 99.5 3E-14 1E-18 94.5 6.8 100 42-141 40-173 (256)
67 3utm_A Tankyrase-1; tankyrase, 99.5 1E-13 3.4E-18 95.3 9.5 98 44-141 57-158 (351)
68 2jab_A H10-2-G3; HER2, darpin, 99.5 4E-14 1.4E-18 85.6 6.6 86 45-130 47-136 (136)
69 1n0r_A 4ANK, 4 ankyrin repeats 99.5 7.9E-14 2.7E-18 82.7 7.7 97 45-141 2-102 (126)
70 1n11_A Ankyrin; clathrin, BAND 99.5 4E-14 1.4E-18 100.5 7.5 94 47-140 49-146 (437)
71 3d9h_A CDNA FLJ77766, highly s 99.5 7.1E-14 2.4E-18 94.4 8.3 96 45-141 157-256 (285)
72 2f8y_A Notch homolog 1, transl 99.5 1.3E-13 4.4E-18 89.5 9.2 97 45-141 58-159 (223)
73 3jxi_A Vanilloid receptor-rela 99.5 5.9E-14 2E-18 93.3 7.7 99 43-141 44-177 (260)
74 3lvq_E ARF-GAP with SH3 domain 99.5 2.8E-14 9.7E-19 103.2 6.5 95 47-141 134-241 (497)
75 2zgd_A 3 repeat synthetic anky 99.5 1.2E-13 4E-18 80.8 7.9 63 79-141 29-91 (110)
76 2rfa_A Transient receptor pote 99.5 1.4E-13 4.8E-18 90.0 8.8 98 44-141 74-198 (232)
77 3aji_A 26S proteasome non-ATPa 99.5 1.5E-13 5.3E-18 89.6 8.9 96 46-141 74-173 (231)
78 1dcq_A PYK2-associated protein 99.5 7.2E-14 2.5E-18 94.3 7.5 91 44-134 168-265 (278)
79 3t8k_A Uncharacterized protein 99.5 1.6E-14 5.4E-19 92.2 4.0 52 89-140 57-114 (186)
80 1ycs_B 53BP2, P53BP2; ankyrin 99.5 3.6E-14 1.2E-18 93.6 5.8 97 44-141 4-104 (239)
81 2xai_A ASB-9, ankyrin repeat a 99.5 8.9E-14 3.1E-18 92.7 7.6 97 44-141 35-135 (261)
82 2dzn_A Probable 26S proteasome 99.5 2E-13 6.7E-18 88.9 8.9 98 44-141 71-175 (228)
83 2pnn_A Transient receptor pote 99.5 5.9E-14 2E-18 94.0 6.5 98 44-141 100-234 (273)
84 2pnn_A Transient receptor pote 99.5 1.1E-13 3.8E-18 92.7 7.7 99 43-141 52-185 (273)
85 2b0o_E UPLC1; arfgap, structur 99.5 1.4E-13 5E-18 93.8 8.2 94 48-141 154-260 (301)
86 3aaa_C Myotrophin, protein V-1 99.5 2.7E-13 9.1E-18 80.6 7.8 63 79-141 12-74 (123)
87 1wdy_A 2-5A-dependent ribonucl 99.5 2.3E-13 8E-18 90.9 8.3 71 68-138 212-284 (285)
88 1k1a_A B-cell lymphoma 3-encod 99.5 2.6E-13 8.9E-18 88.9 8.2 68 74-141 115-184 (241)
89 3b7b_A Euchromatic histone-lys 99.5 4.7E-13 1.6E-17 87.6 9.2 96 46-141 78-178 (237)
90 2fo1_E LIN-12 protein; beta-ba 99.5 3.9E-13 1.3E-17 94.0 9.2 68 74-141 278-347 (373)
91 3hra_A Ankyrin repeat family p 99.5 2.7E-13 9.4E-18 86.7 7.8 99 43-141 37-141 (201)
92 4g8k_A 2-5A-dependent ribonucl 99.4 2E-13 6.9E-18 93.9 7.1 70 68-137 232-303 (337)
93 1ikn_D Protein (I-kappa-B-alph 99.4 1.1E-13 3.9E-18 90.7 5.5 97 44-140 116-219 (236)
94 3d9h_A CDNA FLJ77766, highly s 99.4 5.6E-13 1.9E-17 90.0 8.7 91 44-134 58-152 (285)
95 1wdy_A 2-5A-dependent ribonucl 99.4 6.6E-13 2.2E-17 88.7 8.8 94 45-138 39-136 (285)
96 3ljn_A Hypothetical protein; a 99.4 3E-13 1E-17 94.0 7.0 94 44-137 172-274 (364)
97 2l6b_A NR1C; ankyrin, consensu 99.4 2.3E-13 7.8E-18 79.9 5.5 68 74-141 8-76 (115)
98 3c5r_A BARD-1, BRCA1-associate 99.4 4.8E-13 1.6E-17 80.8 7.0 69 73-141 8-77 (137)
99 4hbd_A KN motif and ankyrin re 99.4 5.5E-13 1.9E-17 89.7 7.3 99 43-141 109-217 (276)
100 3eu9_A Huntingtin-interacting 99.4 9.1E-13 3.1E-17 86.0 8.0 98 44-141 41-143 (240)
101 2vge_A RELA-associated inhibit 99.4 9.3E-13 3.2E-17 86.4 7.7 63 79-141 26-88 (229)
102 2zgd_A 3 repeat synthetic anky 99.4 5.4E-13 1.8E-17 77.9 5.9 87 40-126 19-109 (110)
103 4g8k_A 2-5A-dependent ribonucl 99.4 1.1E-12 3.9E-17 90.2 7.6 87 45-136 239-330 (337)
104 3ehr_A Osteoclast-stimulating 99.4 1E-13 3.5E-18 90.3 2.2 97 45-141 106-207 (222)
105 2b0o_E UPLC1; arfgap, structur 99.4 4.8E-13 1.6E-17 91.2 5.4 90 44-133 189-285 (301)
106 3kea_A K1L; tropism, ANK repea 99.4 1.7E-12 5.8E-17 87.7 8.0 91 49-141 4-96 (285)
107 2fo1_E LIN-12 protein; beta-ba 99.4 2.3E-12 8E-17 90.0 8.7 90 44-133 278-372 (373)
108 3ui2_A Signal recognition part 99.3 3.5E-13 1.2E-17 89.2 1.6 66 75-141 45-112 (244)
109 3eu9_A Huntingtin-interacting 99.3 1.6E-11 5.4E-16 80.1 8.9 98 44-141 8-110 (240)
110 3jue_A Arfgap with coiled-coil 99.3 4.4E-12 1.5E-16 88.7 6.3 88 44-131 234-325 (368)
111 3deo_A Signal recognition part 99.3 1.2E-11 4.1E-16 78.3 7.0 62 79-141 49-111 (183)
112 1sw6_A Regulatory protein SWI6 99.2 1.2E-11 4E-16 85.1 5.5 91 51-141 103-202 (327)
113 2aja_A Ankyrin repeat family p 99.2 1.6E-12 5.5E-17 91.1 -1.2 91 44-135 91-191 (376)
114 2aja_A Ankyrin repeat family p 99.1 4.3E-12 1.5E-16 89.0 -0.4 102 31-132 100-224 (376)
115 1gp8_A Protein (scaffolding pr 45.5 21 0.0007 16.1 2.2 16 112-127 18-33 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.80 E-value=2e-19 Score=113.35 Aligned_cols=111 Identities=25% Similarity=0.303 Sum_probs=81.6
Q ss_pred cccCChHHHhhCCCCCccccccccCChHHHHHHHHh--------------CChhhhccCccc-hhHhhcCCHHHHHHHHH
Q psy229 31 DTRCDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQH--------------EPQTVLQYTHAA-TIQVAKGDKELVLSILA 95 (142)
Q Consensus 31 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~~--------------~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~ 95 (142)
...+..+.++.+.+.+..++..+..|.+++++++.. +++..+..+.++ ++|+..|+.+++++|++
T Consensus 12 a~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~ 91 (169)
T 4gpm_A 12 AENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 91 (169)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 345556666666666666665555555555544442 344444555565 67888889999999998
Q ss_pred cCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 96 AGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 96 ~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 92 ~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~ 137 (169)
T 4gpm_A 92 KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGR 137 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC
Confidence 8988888888899999999999999999999999999888888774
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.72 E-value=2.3e-17 Score=103.87 Aligned_cols=93 Identities=19% Similarity=0.257 Sum_probs=73.3
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.+||+.+...|...+..++.. +++..+..+.++ ++|+..|+.+++++|+..|++++.+|..|.|||++|+..|
T Consensus 68 ~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g 147 (169)
T 4gpm_A 68 SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHG 147 (169)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC
Confidence 345677777777777765544443 556666677777 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCccc
Q psy229 119 SVSVTQALLGFGAEVNV 135 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~ 135 (142)
+.+++++|+++||+++.
T Consensus 148 ~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp CHHHHHHHHTC------
T ss_pred CHHHHHHHHHCCCCcCC
Confidence 99999999999999874
No 3
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.71 E-value=3.7e-17 Score=97.50 Aligned_cols=98 Identities=20% Similarity=0.118 Sum_probs=81.7
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~ 85 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGH 85 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 34577888887787775544443 445555556666 78899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 86 ~~~v~~Ll~~ga~~~~~~~~g~ 107 (123)
T 3aaa_C 86 VSCVKLLLSKGADKTVKGPDGL 107 (123)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999998875
No 4
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.70 E-value=8.3e-17 Score=91.51 Aligned_cols=88 Identities=27% Similarity=0.363 Sum_probs=73.7
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~ 81 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 4678888888888775555554 455556666666 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCC
Q psy229 121 SVTQALLGFGAE 132 (142)
Q Consensus 121 ~~~~~Ll~~ga~ 132 (142)
+++++|+++|++
T Consensus 82 ~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 82 EVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 999999999985
No 5
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.69 E-value=1e-16 Score=97.23 Aligned_cols=99 Identities=22% Similarity=0.257 Sum_probs=84.7
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..+
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 87 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNG 87 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcC
Confidence 457788998888888875555544 455555566666 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.+|..|.
T Consensus 88 ~~~~v~~Ll~~ga~~~~~~~~g~ 110 (137)
T 3c5r_A 88 HVDIVKLLLSYGASRNAVNIFGL 110 (137)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHHHcCCCCCCCCCCCC
Confidence 99999999999999999998874
No 6
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.69 E-value=3.8e-17 Score=96.26 Aligned_cols=100 Identities=22% Similarity=0.268 Sum_probs=83.5
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..+
T Consensus 7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~ 86 (115)
T 2l6b_A 7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNG 86 (115)
T ss_dssp CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Confidence 456788888887777775555554 444455556665 6889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYFP 142 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~~ 142 (142)
+.+++++|+++|++++.++..|.+
T Consensus 87 ~~~~~~~Ll~~ga~~n~~~~~~~~ 110 (115)
T 2l6b_A 87 HHEIVKLLDAKGADVNARSWGSSH 110 (115)
T ss_dssp CHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred CHHHHHHHHHcCCCCCcCCccccc
Confidence 999999999999999999988764
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.68 E-value=1.6e-16 Score=96.26 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=56.0
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCC-CChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGD-GNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-g~tpL~~a~~~~ 118 (142)
.+.++++.+...+...+...+.. +++..+..+.++ ++|+. ++.+++++|++.|++++.+|.. |.||||+|+..+
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 89 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREG 89 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcC
Confidence 44556666665555553333332 333334444444 45555 6666666666666666666666 666666666666
Q ss_pred CHHHHHHHHhCCCCcccccCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
+.+++++|+++|++++.+|..|
T Consensus 90 ~~~~v~~Ll~~ga~~~~~d~~g 111 (136)
T 1d9s_A 90 FLDTLVVLHRAGARLDVCDAWG 111 (136)
T ss_dssp CHHHHHHHHHTCCCCCCCSSSS
T ss_pred CHHHHHHHHHcCCCCCccCCCC
Confidence 6666666666666666666555
No 8
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.67 E-value=4.9e-16 Score=96.88 Aligned_cols=98 Identities=20% Similarity=0.204 Sum_probs=83.6
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 120 (165)
T 3twr_A 41 RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGK 120 (165)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCC
Confidence 45688888888888875555554 455555556666 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 121 ~~~v~~Ll~~ga~~~~~~~~g~ 142 (165)
T 3twr_A 121 YEICKLLLQHGADPTKKNRDGN 142 (165)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHcCCCCcccCCCCC
Confidence 9999999999999999998874
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.67 E-value=1.5e-16 Score=106.89 Aligned_cols=75 Identities=29% Similarity=0.334 Sum_probs=66.2
Q ss_pred CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 67 EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 67 ~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++..+..+.++ ++|+..|+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 144 ~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~ 219 (269)
T 4b93_B 144 KPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQR 219 (269)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC
Confidence 444455556666 688999999999999999999999999999999999999999999999999999999998875
No 10
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.66 E-value=3e-16 Score=95.07 Aligned_cols=98 Identities=24% Similarity=0.279 Sum_probs=76.3
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.++..|...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~ 92 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCC
Confidence 35567777777777765544443 344444455555 67888899999999999999998888899999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 93 ~~~v~~Ll~~g~~~~~~~~~g~ 114 (136)
T 2jab_A 93 LEIAEVLLKHGADVNAQDKFGK 114 (136)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHcCCCCcCcCCCCC
Confidence 9999999999999988887764
No 11
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.66 E-value=7.2e-16 Score=97.39 Aligned_cols=99 Identities=18% Similarity=0.173 Sum_probs=83.8
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..+
T Consensus 37 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~ 116 (179)
T 3f6q_A 37 DHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG 116 (179)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 346688888888888775555554 455555556666 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.+|..|.
T Consensus 117 ~~~~v~~Ll~~ga~~~~~~~~g~ 139 (179)
T 3f6q_A 117 QDQVAEDLVANGALVSICNKYGE 139 (179)
T ss_dssp CHHHHHHHHHTTCCSSBCCTTSC
T ss_pred CHHHHHHHHHCCCCcchhccCCC
Confidence 99999999999999999998874
No 12
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.66 E-value=4.5e-16 Score=95.98 Aligned_cols=99 Identities=21% Similarity=0.221 Sum_probs=83.9
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..+
T Consensus 32 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 111 (153)
T 1awc_B 32 WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHN 111 (153)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 346788888888888876555554 444555556666 6889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.+|..|.
T Consensus 112 ~~~~v~~Ll~~ga~~~~~~~~g~ 134 (153)
T 1awc_B 112 HQEVVELLIKYGADVHTQSKFCK 134 (153)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHHHcCCCccccCCCCC
Confidence 99999999999999999988874
No 13
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.65 E-value=6.1e-16 Score=95.79 Aligned_cols=96 Identities=17% Similarity=0.159 Sum_probs=72.6
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCcc-c-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHA-A-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~-~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
.+.++++.+. .+...+..++.. +++..+..+.+ + ++|+..++.+++++|+..|++++.+|..|.||||+|+..+
T Consensus 44 ~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~ 122 (156)
T 1bi7_B 44 YGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122 (156)
T ss_dssp SSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT
T ss_pred CCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC
Confidence 4668888875 667765555554 55666666776 6 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g 140 (142)
+.+++++|+++|++++.++..|
T Consensus 123 ~~~~v~~Ll~~ga~~~~~~~~g 144 (156)
T 1bi7_B 123 HRDVARYLRAAAGGTRGSNHAR 144 (156)
T ss_dssp CHHHHHHHSSCC----------
T ss_pred HHHHHHHHHHcCCCCCccCcCc
Confidence 9999999999999999988776
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.65 E-value=6.3e-16 Score=96.88 Aligned_cols=98 Identities=23% Similarity=0.237 Sum_probs=78.7
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 46 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 125 (169)
T 2y1l_E 46 SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGH 125 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence 34566666666666654444443 344445555565 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 126 ~~~v~~Ll~~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 126 LEIVEVLLKNGADVNAQDKFGK 147 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999988774
No 15
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.65 E-value=1.1e-15 Score=95.86 Aligned_cols=99 Identities=21% Similarity=0.323 Sum_probs=79.6
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..+
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (172)
T 3v30_A 34 ERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN 113 (172)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 456677888877777765544443 445555556666 6888899999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.++..|.
T Consensus 114 ~~~~v~~Ll~~ga~~~~~~~~g~ 136 (172)
T 3v30_A 114 HVKCVEALLARGADLTTEADSGY 136 (172)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHHHcCCCccccCCCCC
Confidence 99999999999999998888764
No 16
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.63 E-value=1.5e-15 Score=94.81 Aligned_cols=99 Identities=22% Similarity=0.296 Sum_probs=82.2
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..+
T Consensus 34 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 113 (167)
T 3v31_A 34 EEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN 113 (167)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC
Confidence 346677888887777775555444 444455556665 6889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.++..|.
T Consensus 114 ~~~~v~~Ll~~g~~~~~~~~~g~ 136 (167)
T 3v31_A 114 HVKCVKMLLESGADPTIETDSGY 136 (167)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHHHcCCCCCCcCCCCC
Confidence 99999999999999999988774
No 17
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.63 E-value=1.3e-15 Score=102.07 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=80.0
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhc-cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQ-YTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQN 117 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~ 117 (142)
..+.++++.+...|...+..++.. +++..+. .+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..
T Consensus 156 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 156 YDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTS
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHc
Confidence 356788888888888775555544 3444432 25666 789999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCCcccccCCCC
Q psy229 118 NSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 118 ~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++.+++++|+++|++++.+|..|.
T Consensus 236 ~~~~~v~~Ll~~ga~~~~~~~~g~ 259 (282)
T 1oy3_D 236 PNPILARLLRAHGAPEPEDGGDKL 259 (282)
T ss_dssp SCHHHHHHHHHTTCCCCCCC----
T ss_pred CCcHHHHHHHHcCCCcCcCCCccc
Confidence 999999999999999999998874
No 18
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.63 E-value=6.6e-16 Score=100.67 Aligned_cols=98 Identities=21% Similarity=0.196 Sum_probs=84.0
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAA-GAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
.+.++|+.++..|...+...+.. +++..+..+.++ ++|+..|+.+++++|+.. |++++.+|..|.||||+|+..|
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~ 151 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKG 151 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHT
T ss_pred ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcC
Confidence 45788999988888875555544 455555666666 789999999999999998 9999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.+|..|.
T Consensus 152 ~~~~v~~Ll~~ga~~~~~~~~g~ 174 (222)
T 3ehr_A 152 YADIVQLLLAKGARTDLRNIEKK 174 (222)
T ss_dssp CHHHHHHHHHHTCCSCCCCTTSC
T ss_pred CHHHHHHHHHcCCCCccccCCCC
Confidence 99999999999999999998874
No 19
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.62 E-value=1.1e-15 Score=101.18 Aligned_cols=98 Identities=22% Similarity=0.237 Sum_probs=82.8
Q ss_pred CCCccccccccCChHHHHHHHHh--CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH--EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKD-GDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...|...+...+.. +++..+..+.++ |+|+..|+.+++++|+..|++++.++ ..|.||||+|+..|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~ 123 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 123 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC
Confidence 45678888888887775555544 455556666666 68899999999999999999999998 789999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 124 ~~~v~~Ll~~ga~~~~~d~~g~ 145 (244)
T 3ui2_A 124 PEVVEALVELGADIEVEDERGL 145 (244)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCC
T ss_pred HHHHHHHHHCCCCCCCCCCCCC
Confidence 9999999999999999998875
No 20
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.62 E-value=9.9e-16 Score=97.21 Aligned_cols=98 Identities=22% Similarity=0.237 Sum_probs=82.1
Q ss_pred CCCccccccccCChHHHHHHHHh--CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH--EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKD-GDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...|...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.++ ..|.||||+|+..++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~ 122 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 122 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCc
Confidence 45677888887777765555444 445555566666 68899999999999999999999998 889999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 123 ~~~v~~Ll~~ga~~~~~d~~g~ 144 (183)
T 3deo_A 123 PEVVEALVELGADIEVEDERGL 144 (183)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSC
T ss_pred HHHHHHHHHcCCCCcCCCCCCC
Confidence 9999999999999999998874
No 21
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.62 E-value=1e-15 Score=94.78 Aligned_cols=100 Identities=18% Similarity=0.148 Sum_probs=83.4
Q ss_pred CCCCCccccccccCChHHHHHHHHh---CChhhhccCccchhHhhcCCHHHHHHHHHcCCCCCCCCCCCCh-HHHHHHHc
Q psy229 42 LPRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAATIQVAKGDKELVLSILAAGAALELKDGDGNT-PLHIAAQN 117 (142)
Q Consensus 42 l~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t-pL~~a~~~ 117 (142)
...+.++++.+...|...+...+.. +++..+..+.++...+..++.+++++|+..|++++.+|..|.| |||+|+..
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~ 88 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCADPATLTRPVHDAARE 88 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSCTTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHH
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHC
Confidence 4557889999998888886655554 4555566666763333599999999999999999999999999 99999999
Q ss_pred CCHHHHHHHHhCCCCcccccCCCC
Q psy229 118 NSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 118 ~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++.+++++|+++|++++.+|..|.
T Consensus 89 ~~~~~v~~Ll~~ga~~~~~d~~g~ 112 (156)
T 1bi7_B 89 GFLDTLVVLHRAGARLDVRDAWGR 112 (156)
T ss_dssp TCHHHHHHHHHHTCCSSCCCTTCC
T ss_pred CCHHHHHHHHHcCCCCcccCCCCC
Confidence 999999999999999999998875
No 22
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.62 E-value=2.4e-15 Score=95.91 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=79.9
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 146 (192)
T 2rfm_A 67 EGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGR 146 (192)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred cCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 46677777777777765444443 444555556666 68888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 147 ~~~v~~Ll~~ga~~~~~~~~g~ 168 (192)
T 2rfm_A 147 SEIVKKLLELGADISARDLTGL 168 (192)
T ss_dssp HHHHHHHHHTTCCTTCBCTTSC
T ss_pred HHHHHHHHHCCCCCCCcCCCCC
Confidence 9999999999999999888774
No 23
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.62 E-value=4.7e-15 Score=97.34 Aligned_cols=110 Identities=17% Similarity=0.176 Sum_probs=87.1
Q ss_pred ccCChHHHhhCCCCCccccccccCChHHHHHHHHh-CC-------------------hhhhccCccc-hhHhhcCCHHHH
Q psy229 32 TRCDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQH-EP-------------------QTVLQYTHAA-TIQVAKGDKELV 90 (142)
Q Consensus 32 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~~-~~-------------------~~~~~~~~~~-~~a~~~~~~~~~ 90 (142)
.....++++.+.+.+..+...+..|.+++++++.. +. ...+..+.++ ++|+..++.+++
T Consensus 54 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v 133 (236)
T 1ikn_D 54 ITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIV 133 (236)
T ss_dssp HTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHH
Confidence 44557788888887777776666676666666553 11 1122224444 689999999999
Q ss_pred HHHHHcCCCCCCCCC-CCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 91 LSILAAGAALELKDG-DGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 91 ~~Ll~~~~~~~~~~~-~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++|+..|++++.++. .|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 134 ~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 185 (236)
T 1ikn_D 134 ELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 185 (236)
T ss_dssp HHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCC
T ss_pred HHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCC
Confidence 999999999999997 999999999999999999999999999999998875
No 24
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.62 E-value=9e-16 Score=101.26 Aligned_cols=97 Identities=28% Similarity=0.261 Sum_probs=79.0
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...|...+...+.. +++..+..+.++ |+|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.
T Consensus 37 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~ 116 (239)
T 1ycs_B 37 PLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV 116 (239)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 3466666666666665444443 445555556666 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.++..|.
T Consensus 117 ~~v~~Ll~~ga~~~~~~~~~~ 137 (239)
T 1ycs_B 117 QVCKFLVESGAAVFAMTYSDM 137 (239)
T ss_dssp HHHHHHHHTTCCTTCCCSSSC
T ss_pred HHHHHHHHcCCCcceecCCCC
Confidence 999999999999998887653
No 25
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.61 E-value=3.5e-15 Score=88.66 Aligned_cols=54 Identities=41% Similarity=0.602 Sum_probs=30.2
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAE 132 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~ 132 (142)
++|+..++.+++++|++.|++++.+|..|.|||++|+..++.+++++|+++|++
T Consensus 73 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 73 HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred HHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 345555555555555555555555555555555555555555555555555543
No 26
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.61 E-value=2.9e-15 Score=85.03 Aligned_cols=63 Identities=38% Similarity=0.535 Sum_probs=60.2
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 7 ~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 69 (93)
T 1n0q_A 7 HLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR 69 (93)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 678899999999999999999999999999999999999999999999999999999998875
No 27
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.61 E-value=3.9e-15 Score=92.89 Aligned_cols=98 Identities=16% Similarity=0.103 Sum_probs=83.5
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...|...+...+.. .++..+..+.++ ++|+..++.+++++|++.|++++..+..|.||||+|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46788999998888875555444 344455556666 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.++..|.
T Consensus 82 ~~~v~~Ll~~g~~~~~~~~~g~ 103 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYDWNGG 103 (167)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSC
T ss_pred HHHHHHHHHCCCCCCcCCCCCC
Confidence 9999999999999999988774
No 28
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.61 E-value=2.4e-15 Score=101.06 Aligned_cols=104 Identities=22% Similarity=0.218 Sum_probs=78.0
Q ss_pred HHhhCCCCCccccccccCChHHHHHHHHh-C-------------ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCC
Q psy229 38 YLTSLPRPDSHLRAYTGYGINTLLWYMQH-E-------------PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALEL 102 (142)
Q Consensus 38 ~~~~l~~~~~~l~~~~~~~~~~l~~~~~~-~-------------~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~ 102 (142)
++..+.+.+..++..+..|.+++++++.. + +...+..+.++ +.++..++.+++++|+..|++++.
T Consensus 68 ~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~ 147 (269)
T 4b93_B 68 RLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK 147 (269)
T ss_dssp -------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC
T ss_pred HHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC
Confidence 45556666666666666666666665553 2 22223334444 578889999999999999999999
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 103 KDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 103 ~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+|..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 148 ~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~ 186 (269)
T 4b93_B 148 KDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGN 186 (269)
T ss_dssp CCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCC
Confidence 999999999999999999999999999999999998875
No 29
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.59 E-value=9e-15 Score=90.69 Aligned_cols=97 Identities=20% Similarity=0.197 Sum_probs=74.5
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+.. +...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 37 ~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 115 (162)
T 1ihb_A 37 FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH 115 (162)
T ss_dssp TSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 45677777777 66664444443 444445555555 68888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCC-cccccCCCC
Q psy229 120 VSVTQALLGFGAE-VNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~-~~~~~~~g~ 141 (142)
.+++++|+++|++ ++.++..|.
T Consensus 116 ~~~v~~Ll~~g~~~~~~~~~~g~ 138 (162)
T 1ihb_A 116 LRVVEFLVKHTASNVGHRNHKGD 138 (162)
T ss_dssp HHHHHHHHHHSCCCTTCCCTTSC
T ss_pred HHHHHHHHHccCCCCCCcCCCCC
Confidence 9999999999987 577777664
No 30
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.59 E-value=1.3e-14 Score=89.54 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=81.3
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++. +..+...+...+.. +++..+..+.++ ++|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus 34 ~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (156)
T 1bd8_A 34 RFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG 112 (156)
T ss_dssp TTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT
T ss_pred CCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC
Confidence 357788888 77777775544444 455555566666 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++ ++++.+|..|.
T Consensus 113 ~~~~v~~Ll~~-~~~~~~~~~g~ 134 (156)
T 1bd8_A 113 HTAVVSFLAAE-SDLHRRDARGL 134 (156)
T ss_dssp CHHHHHHHHTT-SCTTCCCTTSC
T ss_pred hHHHHHHHHhc-cCCCCcCCCCC
Confidence 99999999999 99999888774
No 31
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.59 E-value=6.1e-15 Score=89.27 Aligned_cols=89 Identities=15% Similarity=0.153 Sum_probs=76.7
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhcc-Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQY-THAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQN 117 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~-~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~ 117 (142)
..+.++++.+.. +...+..++.. +++..+.. +.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 43 ~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~ 121 (136)
T 1d9s_A 43 RFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQ 121 (136)
T ss_dssp TTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHH
T ss_pred CCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHc
Confidence 457789999988 88876555554 55666666 6676 789999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCCCC
Q psy229 118 NSVSVTQALLGFGAE 132 (142)
Q Consensus 118 ~~~~~~~~Ll~~ga~ 132 (142)
++.+++++|+++|++
T Consensus 122 ~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 122 GHRDIARYLHAATGD 136 (136)
T ss_dssp TCHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHcCCC
Confidence 999999999999986
No 32
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.59 E-value=3.2e-15 Score=95.36 Aligned_cols=74 Identities=9% Similarity=-0.027 Sum_probs=38.6
Q ss_pred CChhhhccCccc-hhHhhcCC------HHHHHHHHHcCCCCCCCCCCCC-hHHHHHHHcCCH-----HHHHHHHh-CCCC
Q psy229 67 EPQTVLQYTHAA-TIQVAKGD------KELVLSILAAGAALELKDGDGN-TPLHIAAQNNSV-----SVTQALLG-FGAE 132 (142)
Q Consensus 67 ~~~~~~~~~~~~-~~a~~~~~------~~~~~~Ll~~~~~~~~~~~~g~-tpL~~a~~~~~~-----~~~~~Ll~-~ga~ 132 (142)
+++..+..+.++ |+|+..++ .+++++|+..|++++.+|..|. ||||+|+..+.. +++++|++ +|++
T Consensus 67 dvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad 146 (186)
T 3t8k_A 67 DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ 146 (186)
T ss_dssp CSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC
T ss_pred CCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC
Confidence 344444444444 34444443 3455555555555555555555 555555554442 25555555 5555
Q ss_pred cccccCCC
Q psy229 133 VNVSQIPY 140 (142)
Q Consensus 133 ~~~~~~~g 140 (142)
++.+|..|
T Consensus 147 ~~~~d~~G 154 (186)
T 3t8k_A 147 LLIKDKWG 154 (186)
T ss_dssp TTCCCTTS
T ss_pred CcccCCCC
Confidence 55555555
No 33
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.59 E-value=5.3e-15 Score=97.18 Aligned_cols=98 Identities=22% Similarity=0.201 Sum_probs=74.9
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...|...+...+.. +++..+..+.++ ++|+..|+.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~ 99 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCND 99 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 34466777777777764444443 455555566666 67888899999999999999998888899999999999999
Q ss_pred HHHHHHHHhCCCCccccc-CCCC
Q psy229 120 VSVTQALLGFGAEVNVSQ-IPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~-~~g~ 141 (142)
.+++++|+++|++++.++ ..|.
T Consensus 100 ~~~v~~Ll~~ga~~~~~~~~~g~ 122 (229)
T 2vge_A 100 TVICMALVQHGAAIFATTLSDGA 122 (229)
T ss_dssp HHHHHHHHTTTCCTTCCCSSTTC
T ss_pred HHHHHHHHHcCCCcccccCCCCC
Confidence 999999999999988775 4553
No 34
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.58 E-value=3.5e-15 Score=100.46 Aligned_cols=69 Identities=23% Similarity=0.355 Sum_probs=63.2
Q ss_pred ccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHh-CCCCcccccCCCC
Q psy229 73 QYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLG-FGAEVNVSQIPYF 141 (142)
Q Consensus 73 ~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~-~ga~~~~~~~~g~ 141 (142)
..+.++ ++|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~ 251 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGS 251 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCC
Confidence 345555 68899999999999999999999999999999999999999999999999 8999999998875
No 35
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.58 E-value=1.2e-14 Score=94.85 Aligned_cols=97 Identities=23% Similarity=0.298 Sum_probs=72.6
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++.
T Consensus 106 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 185 (231)
T 3aji_A 106 GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV 185 (231)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCH
Confidence 3445555555555543333332 334444445555 688889999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 186 ~~v~~Ll~~ga~~~~~~~~g~ 206 (231)
T 3aji_A 186 EEAKFLVTQGASIYIENKEEK 206 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSC
T ss_pred HHHHHHHHCCCCCCCCCCCCC
Confidence 999999999999998888774
No 36
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.57 E-value=1.4e-14 Score=91.47 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=79.2
Q ss_pred CCCccccccccCChHHHHHHHHh----CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH----EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
+..++++.+...|...+...+.. .++..+..+.++ ++|+..++.+++++|+..|++++..|..|.||||+|+..+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 34567777777787775544443 234444455555 6889999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.+|..|.
T Consensus 84 ~~~~v~~Ll~~g~~~~~~d~~g~ 106 (179)
T 3f6q_A 84 HRDIVQKLLQYKADINAVNEHGN 106 (179)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHHHcCCCCCccCCCCC
Confidence 99999999999999999998874
No 37
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.57 E-value=7.3e-15 Score=93.68 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=83.4
Q ss_pred CCCCccccccccCChHHHH-HHHHh--CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 43 PRPDSHLRAYTGYGINTLL-WYMQH--EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~-~~~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
..+.++++.+...|...+. +++.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..+
T Consensus 33 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 112 (192)
T 2rfm_A 33 SYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFG 112 (192)
T ss_dssp TTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcC
Confidence 4577888888887777644 44433 455555566666 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.++..|.
T Consensus 113 ~~~~v~~Ll~~g~~~~~~~~~g~ 135 (192)
T 2rfm_A 113 YSEMSYFLLEHGANVNDRNLEGE 135 (192)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCC
T ss_pred CHHHHHHHHHCCCCCCCCCCCCC
Confidence 99999999999999999988874
No 38
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.57 E-value=6.7e-15 Score=97.69 Aligned_cols=73 Identities=21% Similarity=0.265 Sum_probs=58.3
Q ss_pred hhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 69 QTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 69 ~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 151 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 224 (253)
T 1yyh_A 151 NAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDR 224 (253)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCC
Confidence 3334445555 577888888888888888888888888888888888888888888888888888888887763
No 39
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.57 E-value=1.3e-14 Score=95.11 Aligned_cols=97 Identities=14% Similarity=0.147 Sum_probs=75.1
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhh-ccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVL-QYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~-~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
+.++++.+...+...+...+.. +++..+ ..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 116 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 116 GLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4566666666666654444443 233333 334455 68888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 196 ~~~v~~Ll~~ga~~~~~~~~g~ 217 (241)
T 1k1a_A 196 LPLVRTLVRSGADSSLKNCHND 217 (241)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHhcCCCCCCcCCCCC
Confidence 9999999999999999888774
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.57 E-value=1.2e-14 Score=94.61 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=71.2
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAG-AALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..| ++++.+|..|.||||+|+..++
T Consensus 107 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~ 186 (228)
T 2dzn_A 107 GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGH 186 (228)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCC
Confidence 3455555555555554333333 344444455555 6788888899999999888 8888888889999999999999
Q ss_pred HHHHHHHH-hCCCCcccccCCCC
Q psy229 120 VSVTQALL-GFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll-~~ga~~~~~~~~g~ 141 (142)
.+++++|+ ++|++++.+|..|.
T Consensus 187 ~~~v~~Ll~~~ga~~~~~~~~g~ 209 (228)
T 2dzn_A 187 GDAAVLLVEKYGAEYDLVDNKGA 209 (228)
T ss_dssp HHHHHHHHHHHCCCSCCBCTTSC
T ss_pred HHHHHHHHHhcCCCCCccCCCCC
Confidence 99999998 78999888888774
No 41
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.56 E-value=3e-14 Score=89.24 Aligned_cols=96 Identities=16% Similarity=0.109 Sum_probs=78.9
Q ss_pred CccccccccCChHHHH-HHHHhCChhh---hccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 46 DSHLRAYTGYGINTLL-WYMQHEPQTV---LQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~-~~~~~~~~~~---~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
.++++.++..|...+. +++...+... +..+.++ ++|+..++.+++++|++.|++++..+..|.||||+|+..++.
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCH
Confidence 4678888888887744 4444444333 3444455 689999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.++..|.
T Consensus 83 ~~v~~Ll~~g~~~~~~~~~g~ 103 (172)
T 3v30_A 83 DIVGLLLERDVDINIYDWNGG 103 (172)
T ss_dssp HHHHHHHTTTCCTTCCCTTSC
T ss_pred HHHHHHHHcCCCCCCCCCCCC
Confidence 999999999999999988774
No 42
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.56 E-value=9.7e-15 Score=90.08 Aligned_cols=96 Identities=22% Similarity=0.367 Sum_probs=79.2
Q ss_pred CCccccccccCChHHHH-HHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLL-WYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~-~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
++++++.+...|...+. .++.. +++..+..+.++ ++ +..++.+++++|++.|++++.+|..|.||||+|+..|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCc
Confidence 34667777777777644 44433 445555566666 45 88999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 81 ~~~v~~Ll~~g~~~~~~~~~g~ 102 (156)
T 1bd8_A 81 LDTLKVLVEHGADVNVPDGTGA 102 (156)
T ss_dssp HHHHHHHHHTTCCSCCCCTTSC
T ss_pred HHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999988875
No 43
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.55 E-value=2.6e-14 Score=92.89 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=62.9
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++.
T Consensus 92 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 92 GTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSY 171 (223)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred CCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCH
Confidence 3445555555454443333332 333334444454 567777778888888877777777777788888888888888
Q ss_pred HHHHHHHhCCCCcccccCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g 140 (142)
+++++|+++|++++.+|..|
T Consensus 172 ~~v~~Ll~~ga~~~~~~~~g 191 (223)
T 2f8y_A 172 ETAKVLLDHFANRDITDHMD 191 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTC
T ss_pred HHHHHHHHcCCCCccccccC
Confidence 88888888888777777665
No 44
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.55 E-value=2.4e-14 Score=98.39 Aligned_cols=98 Identities=14% Similarity=0.213 Sum_probs=81.8
Q ss_pred CCCccccccccC---ChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q psy229 44 RPDSHLRAYTGY---GINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ 116 (142)
Q Consensus 44 ~~~~~l~~~~~~---~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~ 116 (142)
.+.++++.+... +...+...+.. +++..+..+.++ ++|+..|+.+++++|++.|++++.+|..|.||||+|+.
T Consensus 210 ~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 210 SHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAAL 289 (351)
T ss_dssp TCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 456778777765 44555545444 455556666666 78999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCcccccCCCC
Q psy229 117 NNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 117 ~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.|+.+++++|+++|++++.+|..|.
T Consensus 290 ~~~~~~v~~Ll~~gad~~~~~~~g~ 314 (351)
T 3utm_A 290 AGHLQTCRLLLSYGSDPSIISLQGF 314 (351)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999999998875
No 45
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.55 E-value=2.2e-14 Score=94.02 Aligned_cols=97 Identities=19% Similarity=0.138 Sum_probs=73.2
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+..++.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++.
T Consensus 111 g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 190 (237)
T 3b7b_A 111 GWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRY 190 (237)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCH
Confidence 3455565555555554444433 333344445555 678889999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 191 ~~v~~Ll~~gad~~~~d~~g~ 211 (237)
T 3b7b_A 191 DCVVLFLSRDSDVTLKNKEGE 211 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTSC
T ss_pred hHHHHHHHcCCCCCccCCCCC
Confidence 999999999999998888874
No 46
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.55 E-value=2.2e-14 Score=89.75 Aligned_cols=98 Identities=21% Similarity=0.252 Sum_probs=80.4
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
...++++.+...|...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++..|..|.||||+|+..++
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 92 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGH 92 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred cccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 34556777777787775544444 344444555555 68899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.++..|.
T Consensus 93 ~~~~~~Ll~~g~~~~~~~~~g~ 114 (169)
T 2y1l_E 93 LEIVEVLLKNGADVNANDMEGH 114 (169)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHcCCCCCCCCCCCC
Confidence 9999999999999999888764
No 47
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.55 E-value=7.4e-15 Score=101.07 Aligned_cols=110 Identities=18% Similarity=0.161 Sum_probs=83.7
Q ss_pred ccCChHHHhhCCCCCccccccccCChHHHHHHHHh------------------CChhhhccCccc-hhHhh----cCCHH
Q psy229 32 TRCDHAYLTSLPRPDSHLRAYTGYGINTLLWYMQH------------------EPQTVLQYTHAA-TIQVA----KGDKE 88 (142)
Q Consensus 32 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~l~~~~~~------------------~~~~~~~~~~~~-~~a~~----~~~~~ 88 (142)
.....++++.|.+.+..++..+..|.+++++++.. +++..+..+.++ ++|+. .++.+
T Consensus 140 ~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~ 219 (327)
T 1sw6_A 140 SIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSA 219 (327)
T ss_dssp HTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHH
T ss_pred HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHH
Confidence 44456677777766666666666666666666653 233333445555 57777 89999
Q ss_pred HHHHHHHcCC---------------------------------------------CCCCCCCCCChHHHHHHHcCCHHHH
Q psy229 89 LVLSILAAGA---------------------------------------------ALELKDGDGNTPLHIAAQNNSVSVT 123 (142)
Q Consensus 89 ~~~~Ll~~~~---------------------------------------------~~~~~~~~g~tpL~~a~~~~~~~~~ 123 (142)
++++|++.+. +++.+|..|.||||+|+..|+.+++
T Consensus 220 ~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v 299 (327)
T 1sw6_A 220 AAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIV 299 (327)
T ss_dssp HHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHH
T ss_pred HHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHH
Confidence 9999987632 5788899999999999999999999
Q ss_pred HHHHhCCCCcccccCCCC
Q psy229 124 QALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 124 ~~Ll~~ga~~~~~~~~g~ 141 (142)
++|+++|++++.+|..|.
T Consensus 300 ~~Ll~~Gad~~~~d~~G~ 317 (327)
T 1sw6_A 300 DALLDYGADPFIANKSGL 317 (327)
T ss_dssp HHHHHTTCCTTCCCTTSC
T ss_pred HHHHHcCCCCcccCCCCC
Confidence 999999999999999885
No 48
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.54 E-value=1.7e-14 Score=100.30 Aligned_cols=97 Identities=16% Similarity=0.205 Sum_probs=64.8
Q ss_pred CCccccccccCC--hHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCC-----CCCCCCCCChHHHH
Q psy229 45 PDSHLRAYTGYG--INTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAA-----LELKDGDGNTPLHI 113 (142)
Q Consensus 45 ~~~~l~~~~~~~--~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~g~tpL~~ 113 (142)
+.++++.+...| ...+..++.. +++..+..+.++ ++|+..|+.+++++|+..|++ ++..|..|.||||+
T Consensus 138 g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 138 GQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp CCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHH
Confidence 456677777666 5554444433 444445555555 566777777777777777766 77777777777777
Q ss_pred HHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 114 AAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 114 a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|+..|+.+++++|+++|++++.+|..|.
T Consensus 218 A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 245 (364)
T 3ljn_A 218 AILINWEDVAMRFVEMGIDVNMEDNEHT 245 (364)
T ss_dssp HHTTTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCC
Confidence 7777777777777777777777776653
No 49
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.54 E-value=2.1e-14 Score=100.34 Aligned_cols=96 Identities=18% Similarity=0.080 Sum_probs=79.1
Q ss_pred CccccccccC-ChHHHHHHHHh---CChhhh--ccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 46 DSHLRAYTGY-GINTLLWYMQH---EPQTVL--QYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 46 ~~~l~~~~~~-~~~~l~~~~~~---~~~~~~--~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
.++|+.++.. +...+...+.. +++..+ ..+.++ ++|+..++.+++++|+..|++++..|..|.||||+|+..+
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g 279 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence 3567777777 77775544444 444444 445555 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+.+|++++.+|..|.
T Consensus 280 ~~~~v~~LL~~Gad~~~~d~~G~ 302 (368)
T 3jue_A 280 HTGLACLFLKRGADLGARDSEGR 302 (368)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cHHHHHHHHHCcCCCCCcCCCCC
Confidence 99999999999999999998875
No 50
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.54 E-value=2.2e-14 Score=89.33 Aligned_cols=96 Identities=23% Similarity=0.237 Sum_probs=75.7
Q ss_pred CccccccccCChHHHHHHHHh-C---ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 46 DSHLRAYTGYGINTLLWYMQH-E---PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~-~---~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
.++++.+...|...+...+.. . ....+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++.
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 88 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHY 88 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred hHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcH
Confidence 455666666666654444433 2 22233334454 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 89 ~~v~~Ll~~g~~~~~~~~~g~ 109 (165)
T 3twr_A 89 EVAELLVKHGAVVNVADLWKF 109 (165)
T ss_dssp HHHHHHHHTTCCTTCCCTTCC
T ss_pred HHHHHHHhCCCCCCCcCCCCC
Confidence 999999999999999988774
No 51
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.54 E-value=2.6e-14 Score=95.31 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=75.8
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++. +..|.||||+|+..++.
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~ 179 (261)
T 2xai_A 101 LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASE 179 (261)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCH
Confidence 5567777777777765544444 444445555565 688889999999999999999885 78899999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 180 ~~v~~Ll~~gad~~~~d~~g~ 200 (261)
T 2xai_A 180 ELACLLMDFGADTQAKNAEGK 200 (261)
T ss_dssp HHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHcCCCCCCcCCCCC
Confidence 999999999999999988874
No 52
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.54 E-value=1.5e-14 Score=97.78 Aligned_cols=97 Identities=18% Similarity=0.181 Sum_probs=81.4
Q ss_pred CCccccccccCChHHHHH-HHHh--CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLW-YMQH--EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~-~~~~--~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...|...+.. ++.. +++..+..+.++ ++|+..|+.+++++|+..|++++..|..|.||||+|+..|+.
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~ 119 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYL 119 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence 456678888778777444 4443 455556666666 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.++..|.
T Consensus 120 ~~v~~Ll~~g~~~~~~~~~g~ 140 (299)
T 1s70_B 120 DIAEYLISQGAHVGAVNSEGD 140 (299)
T ss_dssp HHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHhCCCCCCCcCCCCC
Confidence 999999999999999888774
No 53
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.54 E-value=1.4e-14 Score=89.19 Aligned_cols=96 Identities=21% Similarity=0.269 Sum_probs=76.9
Q ss_pred CccccccccCChHHHH-HHHHhCCh-hhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHH
Q psy229 46 DSHLRAYTGYGINTLL-WYMQHEPQ-TVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSV 122 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~-~~~~~~~~-~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~ 122 (142)
.++++.+...|...+. +++..... ..+..+.++ ++|+..++.+++++|++.|++++.++..|.||||+|+..++.++
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 82 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI 82 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHH
Confidence 3456667777777644 44443322 223345555 68899999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCcccccCCCC
Q psy229 123 TQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 123 ~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++|+++|++++.++..|.
T Consensus 83 v~~Ll~~g~~~~~~~~~g~ 101 (153)
T 1awc_B 83 VEVLLKHGADVNAKDMLKM 101 (153)
T ss_dssp HHHHHTTTCCTTCCCTTSC
T ss_pred HHHHHHcCCCCCCCCCCCC
Confidence 9999999999999988774
No 54
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.54 E-value=1.9e-14 Score=102.13 Aligned_cols=95 Identities=21% Similarity=0.161 Sum_probs=71.5
Q ss_pred ccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHH
Q psy229 47 SHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSV 122 (142)
Q Consensus 47 ~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~ 122 (142)
++++.+...+...+...+.. .++..+..+.++ ++|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~i 359 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDI 359 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHH
Confidence 34444444444443333222 334444555565 68888999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCcccccCCCC
Q psy229 123 TQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 123 ~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++|+++|++++.+|..|.
T Consensus 360 v~~Ll~~ga~~~~~~~~g~ 378 (437)
T 1n11_A 360 VTLLLKNGASPNEVSSDGT 378 (437)
T ss_dssp HHHHHHTTCCSCCCCSSSC
T ss_pred HHHHHHCcCCCCCCCCCCC
Confidence 9999999999999888774
No 55
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.54 E-value=4.1e-14 Score=92.50 Aligned_cols=98 Identities=22% Similarity=0.250 Sum_probs=70.7
Q ss_pred CCCccccccccCChHHHHHHHHh-CChh-------hhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCC---------
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH-EPQT-------VLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDG--------- 105 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~-~~~~-------~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------- 105 (142)
.+.++++.+...|...+...+.. ..+. .+..+.++ ++|+..++.+++++|++.|++++..+.
T Consensus 36 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~ 115 (232)
T 2rfa_A 36 MGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPH 115 (232)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeeccc
Confidence 45566676666666664444433 3222 22234444 678888888999998888888887765
Q ss_pred ----CCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 106 ----DGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 106 ----~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 116 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 155 (232)
T 2rfa_A 116 NLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGN 155 (232)
T ss_dssp CSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 688899999988889999999988988888887774
No 56
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.53 E-value=1.5e-14 Score=89.74 Aligned_cols=96 Identities=24% Similarity=0.247 Sum_probs=76.6
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
..++++.+...|...+...+.. +++..+..+.++ ++|+. ++.+++++|++.|++++.++..|.||||+|+..++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 3456666776676665544443 334444455555 45566 999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.++..|.
T Consensus 84 ~~v~~Ll~~g~~~~~~~~~g~ 104 (162)
T 1ihb_A 84 DTLQTLLEFQADVNIEDNEGN 104 (162)
T ss_dssp HHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHcCCCCCCcCCCCC
Confidence 999999999999999988875
No 57
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.53 E-value=3.5e-14 Score=102.73 Aligned_cols=95 Identities=13% Similarity=0.062 Sum_probs=74.1
Q ss_pred CCCcccccc---ccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q psy229 44 RPDSHLRAY---TGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ 116 (142)
Q Consensus 44 ~~~~~l~~~---~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~ 116 (142)
.+.++||.+ +..|...+..++.. +++..+..+.++ |+|+..|+.+++++|+..|++++.+|..|.||||+|+.
T Consensus 170 ~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 170 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp SCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHH
T ss_pred ccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 456677777 55676665544443 566667777777 78999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCcccccC
Q psy229 117 NNSVSVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 117 ~~~~~~~~~Ll~~ga~~~~~~~ 138 (142)
.|+.+++++|+++|++++....
T Consensus 250 ~~~~~~~~~Ll~~ga~~~~~~~ 271 (497)
T 3lvq_E 250 KHHKECEELLEQAQAGTFAFPL 271 (497)
T ss_dssp TTCHHHHHHHHHTCC-------
T ss_pred cCCHHHHHHHHHhCCCCCCCcc
Confidence 9999999999999999987543
No 58
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.52 E-value=1.8e-14 Score=95.65 Aligned_cols=69 Identities=19% Similarity=0.192 Sum_probs=59.9
Q ss_pred ccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 73 QYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 73 ~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 191 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE 191 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 334444 678888999999999999999999999999999999999999999999999999999888774
No 59
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.52 E-value=8.1e-14 Score=89.16 Aligned_cols=97 Identities=22% Similarity=0.232 Sum_probs=74.4
Q ss_pred CCccccccccCChHHHHHHHH-h---CChhhhccCccc-hhHhhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHcC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQ-H---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAG-AALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~-~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~tpL~~a~~~~ 118 (142)
+.++++.+...+...+...+. . .++..+..+.++ ++|+..++.+++++|+..| ++++.+|..|.||||+|+..+
T Consensus 72 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~ 151 (201)
T 3hra_A 72 SDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLR 151 (201)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhc
Confidence 345555555555555433333 3 333444445555 6888999999999999998 899999999999999999988
Q ss_pred C-----HHHHHHHHhCCCCcccccCCCC
Q psy229 119 S-----VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~-----~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
. .+++++|+++|++++.+|..|.
T Consensus 152 ~~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 179 (201)
T 3hra_A 152 EGNQLYQDIVKLLMENGADQSIKDNSGR 179 (201)
T ss_dssp CCSHHHHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cchhhHHHHHHHHHHCCCCCCccCCCCC
Confidence 8 8999999999999999988874
No 60
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.52 E-value=5.2e-14 Score=94.96 Aligned_cols=67 Identities=18% Similarity=0.238 Sum_probs=50.7
Q ss_pred Cccc-hhHhhc---CCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 75 THAA-TIQVAK---GDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 75 ~~~~-~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.++ |+|+.. ++.+++++|+..|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~ 239 (278)
T 1dcq_A 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGE 239 (278)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCC
Confidence 4444 566666 777888888888888877777888888888888888888888888888877777664
No 61
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.52 E-value=8.4e-15 Score=99.05 Aligned_cols=63 Identities=25% Similarity=0.266 Sum_probs=60.3
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 204 ~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 266 (299)
T 1s70_B 204 HVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ 266 (299)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 688899999999999999999999999999999999999999999999999999999998874
No 62
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.52 E-value=2.8e-14 Score=96.46 Aligned_cols=98 Identities=13% Similarity=0.013 Sum_probs=75.9
Q ss_pred CCCCccccccccCChHHHHHHHHh-CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH-EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
..+.++++.+...|...+...+.. ..+.-...+.++ ++|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.
T Consensus 29 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~ 108 (285)
T 3kea_A 29 VHGHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNM 108 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHcCCH
Confidence 457788888888888775555554 222211224455 678888999999999999999988888999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g 140 (142)
+++++|+++|++++.++..|
T Consensus 109 ~~v~~Ll~~ga~~~~~~~~g 128 (285)
T 3kea_A 109 QTVKLFVKKNWRLMFYGKTG 128 (285)
T ss_dssp HHHHHHHHHCGGGGGCSSSG
T ss_pred HHHHHHHhcCCCCCccCCCC
Confidence 99999999999998888776
No 63
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.52 E-value=2.2e-14 Score=95.17 Aligned_cols=98 Identities=20% Similarity=0.180 Sum_probs=82.1
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhcc-------------Cccc-hhHhhcCCHHHHHHHHH---cCCCCCCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQY-------------THAA-TIQVAKGDKELVLSILA---AGAALELK 103 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~-------------~~~~-~~a~~~~~~~~~~~Ll~---~~~~~~~~ 103 (142)
.+.++++.+...|...+..++.. +++..+.. +.++ ++|+..|+.+++++|++ .|++++.+
T Consensus 89 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~ 168 (256)
T 2etb_A 89 QGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEAT 168 (256)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCC
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCcc
Confidence 47899999998888886665554 34443332 5565 78999999999999999 99999999
Q ss_pred CCCCChHHHHHHH--cCCHH-------HHHHHHhCCCCc-------ccccCCCC
Q psy229 104 DGDGNTPLHIAAQ--NNSVS-------VTQALLGFGAEV-------NVSQIPYF 141 (142)
Q Consensus 104 ~~~g~tpL~~a~~--~~~~~-------~~~~Ll~~ga~~-------~~~~~~g~ 141 (142)
|..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|.
T Consensus 169 d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~ 222 (256)
T 2etb_A 169 DSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGL 222 (256)
T ss_dssp CTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSC
T ss_pred CCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCC
Confidence 9999999999999 88888 999999999999 88888874
No 64
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.51 E-value=8.1e-14 Score=93.27 Aligned_cols=68 Identities=31% Similarity=0.379 Sum_probs=61.4
Q ss_pred cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCC-CChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 74 YTHAA-TIQVAKGDKELVLSILAAGAALELKDGD-GNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 74 ~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+.++ ++|+..|+.+++++|+..|++++..+.. |.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~ 226 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGR 226 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCC
Confidence 34444 6889999999999999999999998854 99999999999999999999999999999998874
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.51 E-value=2.2e-14 Score=95.31 Aligned_cols=98 Identities=14% Similarity=0.123 Sum_probs=81.8
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhh--------------ccCccc-hhHhhcCCHHHHHHHHH---cCCCCCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVL--------------QYTHAA-TIQVAKGDKELVLSILA---AGAALEL 102 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~--------------~~~~~~-~~a~~~~~~~~~~~Ll~---~~~~~~~ 102 (142)
.+.++|+.+...|...+..++.. +++..+ ..+.++ ++|+..|+.+++++|++ .|++++.
T Consensus 92 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~ 171 (260)
T 3jxi_A 92 RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR 171 (260)
T ss_dssp ESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc
Confidence 56789999998888886665554 444444 345565 78999999999999999 8999999
Q ss_pred CCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCc-------ccccCCCC
Q psy229 103 KDGDGNTPLHIAAQNNS---------VSVTQALLGFGAEV-------NVSQIPYF 141 (142)
Q Consensus 103 ~~~~g~tpL~~a~~~~~---------~~~~~~Ll~~ga~~-------~~~~~~g~ 141 (142)
+|..|.||||+|+..++ .+++++|+++|+++ +.+|..|.
T Consensus 172 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~ 226 (260)
T 3jxi_A 172 QDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGL 226 (260)
T ss_dssp CCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSC
T ss_pred cCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCC
Confidence 99999999999998887 79999999999999 67888775
No 66
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.51 E-value=3e-14 Score=94.51 Aligned_cols=100 Identities=20% Similarity=0.201 Sum_probs=78.6
Q ss_pred CCCCCccccccccC---ChHHHHHHHHh---CChhh-----------hccCccc-hhHhhcCCHHHHHHHHHcCCCCCCC
Q psy229 42 LPRPDSHLRAYTGY---GINTLLWYMQH---EPQTV-----------LQYTHAA-TIQVAKGDKELVLSILAAGAALELK 103 (142)
Q Consensus 42 l~~~~~~l~~~~~~---~~~~l~~~~~~---~~~~~-----------~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~ 103 (142)
-..+.++|+.+... |...+..++.. ++... +..+.++ ++|+..|+.+++++|++.|++++..
T Consensus 40 d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 119 (256)
T 2etb_A 40 GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLR 119 (256)
T ss_dssp TTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 34567788877766 66654333332 22211 1335555 7899999999999999999999999
Q ss_pred CCC-------------CChHHHHHHHcCCHHHHHHHHh---CCCCcccccCCCC
Q psy229 104 DGD-------------GNTPLHIAAQNNSVSVTQALLG---FGAEVNVSQIPYF 141 (142)
Q Consensus 104 ~~~-------------g~tpL~~a~~~~~~~~~~~Ll~---~ga~~~~~~~~g~ 141 (142)
+.. |.||||+|+..|+.+++++|++ +|++++.+|..|.
T Consensus 120 ~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~ 173 (256)
T 2etb_A 120 ACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGN 173 (256)
T ss_dssp CCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCC
Confidence 886 9999999999999999999999 9999999998875
No 67
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.51 E-value=1e-13 Score=95.33 Aligned_cols=98 Identities=23% Similarity=0.217 Sum_probs=81.2
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...|...+...+.. +++..+..+.++ ++|+..|+.+++++|++.|++++..|..|.||||+|+..++
T Consensus 57 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 136 (351)
T 3utm_A 57 RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 136 (351)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence 35677787777777775555544 444455556666 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++..+..|.
T Consensus 137 ~~~v~~Ll~~g~~~~~~~~~g~ 158 (351)
T 3utm_A 137 VEVCSLLLSHGADPTLVNCHGK 158 (351)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHcCCCCccccCCCC
Confidence 9999999999999998887764
No 68
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.51 E-value=4e-14 Score=85.62 Aligned_cols=86 Identities=17% Similarity=0.179 Sum_probs=67.3
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++.
T Consensus 47 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~ 126 (136)
T 2jab_A 47 GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNE 126 (136)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCH
Confidence 4566666665565554444433 344445555665 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCC
Q psy229 121 SVTQALLGFG 130 (142)
Q Consensus 121 ~~~~~Ll~~g 130 (142)
+++++|+++|
T Consensus 127 ~~~~~Ll~~G 136 (136)
T 2jab_A 127 DLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHcC
Confidence 9999999886
No 69
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.51 E-value=7.9e-14 Score=82.71 Aligned_cols=97 Identities=27% Similarity=0.341 Sum_probs=81.5
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChH
Confidence 5678888888888775544443 444455555665 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 82 ~~~~~Ll~~g~~~~~~~~~g~ 102 (126)
T 1n0r_A 82 EVVKLLLEAGADVNAKDKNGR 102 (126)
T ss_dssp HHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHcCCCCcccCCCCC
Confidence 999999999999999888774
No 70
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.50 E-value=4e-14 Score=100.50 Aligned_cols=94 Identities=22% Similarity=0.233 Sum_probs=51.2
Q ss_pred ccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHH
Q psy229 47 SHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSV 122 (142)
Q Consensus 47 ~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~ 122 (142)
++++.++..|...+..++.. +++..+..+.++ ++|+..|+.+++++|++.|++++..+..|.||||+|+..|+.++
T Consensus 49 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~ 128 (437)
T 1n11_A 49 TPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 128 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHH
Confidence 44444444444443333322 223333334444 45566666666666666666666666666666666666666666
Q ss_pred HHHHHhCCCCcccccCCC
Q psy229 123 TQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 123 ~~~Ll~~ga~~~~~~~~g 140 (142)
++.|+++|++++..+..|
T Consensus 129 v~~Ll~~~~~~~~~~~~g 146 (437)
T 1n11_A 129 VLALLEKEASQACMTKKG 146 (437)
T ss_dssp HHHHHHTTCCSCCCCTTS
T ss_pred HHHHHhCCCCCcCCCCCC
Confidence 666666666665555544
No 71
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.50 E-value=7.1e-14 Score=94.42 Aligned_cols=96 Identities=15% Similarity=0.178 Sum_probs=72.4
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...|...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++. +..|.||||+|+..++.
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~ 235 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASE 235 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCH
Confidence 4566666666666664444443 344444555555 678888999999999988888874 77888999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 236 ~~v~~Ll~~gad~~~~d~~g~ 256 (285)
T 3d9h_A 236 ELACLLMDFGADTQAKNAEGK 256 (285)
T ss_dssp HHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHCCCCCCCcCCCCC
Confidence 999999999999988888774
No 72
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.50 E-value=1.3e-13 Score=89.54 Aligned_cols=97 Identities=15% Similarity=0.155 Sum_probs=75.4
Q ss_pred CCccccccccCChHHHHHHHHh----CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH----EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
+.++++.+...+...+...+.. .++..+..+.++ ++|+..++.+++++|+..|++++..|..|.||||+|+..++
T Consensus 58 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 137 (223)
T 2f8y_A 58 GRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNN 137 (223)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCC
Confidence 4455666665565554433333 222333344444 68899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 138 ~~~v~~Ll~~g~~~~~~~~~g~ 159 (223)
T 2f8y_A 138 VDAAVVLLKNGANKDMQNNREE 159 (223)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCC
T ss_pred HHHHHHHHHcCCCCCCcCCCCc
Confidence 9999999999999999988774
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.50 E-value=5.9e-14 Score=93.26 Aligned_cols=99 Identities=18% Similarity=0.139 Sum_probs=78.1
Q ss_pred CCCCccccccc---cCChHHHHHHHHh---CCh-----------hhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCC
Q psy229 43 PRPDSHLRAYT---GYGINTLLWYMQH---EPQ-----------TVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKD 104 (142)
Q Consensus 43 ~~~~~~l~~~~---~~~~~~l~~~~~~---~~~-----------~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~ 104 (142)
..+.++|+.+. ..|...+..++.. .+. ..+..+.++ ++|+..|+.+++++|++.|++++..+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 123 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQA 123 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccc
Confidence 45778888766 5566654444443 111 112245555 78999999999999999999999998
Q ss_pred --------------CCCChHHHHHHHcCCHHHHHHHHh---CCCCcccccCCCC
Q psy229 105 --------------GDGNTPLHIAAQNNSVSVTQALLG---FGAEVNVSQIPYF 141 (142)
Q Consensus 105 --------------~~g~tpL~~a~~~~~~~~~~~Ll~---~ga~~~~~~~~g~ 141 (142)
..|.||||+|+..|+.+++++|++ +|++++.+|..|.
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~ 177 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGN 177 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCC
Confidence 689999999999999999999999 9999999998875
No 74
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.50 E-value=2.8e-14 Score=103.23 Aligned_cols=95 Identities=23% Similarity=0.116 Sum_probs=75.9
Q ss_pred ccccccccCChHH-HHHHHHh--CChhh------hccCccc-hhHhh---cCCHHHHHHHHHcCCCCCCCCCCCChHHHH
Q psy229 47 SHLRAYTGYGINT-LLWYMQH--EPQTV------LQYTHAA-TIQVA---KGDKELVLSILAAGAALELKDGDGNTPLHI 113 (142)
Q Consensus 47 ~~l~~~~~~~~~~-l~~~~~~--~~~~~------~~~~~~~-~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~ 113 (142)
..|+.+...|... +..++.. +++.. +..+.++ |+|+. .|+.+++++|+..|++++.+|..|.||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 3466666667666 4444444 33322 4445555 67744 899999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 114 AAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 114 a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
|+..|+.+++++|+++|++++.+|..|.
T Consensus 214 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~ 241 (497)
T 3lvq_E 214 AALYNQPDCLKLLLKGRALVGTVNEAGE 241 (497)
T ss_dssp HTTTTCHHHHHHHHHTCCCCSCCCTTCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 9999999999999999999999999885
No 75
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.50 E-value=1.2e-13 Score=80.77 Aligned_cols=63 Identities=33% Similarity=0.437 Sum_probs=41.6
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.|+..++.+++++|+..|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 29 ~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~ 91 (110)
T 2zgd_A 29 LEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGK 91 (110)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCC
Confidence 355566666666666666666666666666666666666666666666666666666666553
No 76
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.49 E-value=1.4e-13 Score=89.95 Aligned_cols=98 Identities=18% Similarity=0.198 Sum_probs=78.9
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhc-------------cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQ-------------YTHAA-TIQVAKGDKELVLSILAAGAALELKDGD 106 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~-------------~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 106 (142)
.+.++++.+...+...+..++.. +++..+. .+.++ ++|+..++.+++++|++.|++++.+|..
T Consensus 74 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 153 (232)
T 2rfa_A 74 EGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSL 153 (232)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC
Confidence 46788888888888775555554 2222221 34555 6899999999999999999999999999
Q ss_pred CChHHHHHHHcCCHHHH----HHHHhCCCCc------ccccCCCC
Q psy229 107 GNTPLHIAAQNNSVSVT----QALLGFGAEV------NVSQIPYF 141 (142)
Q Consensus 107 g~tpL~~a~~~~~~~~~----~~Ll~~ga~~------~~~~~~g~ 141 (142)
|.||||+|+..++.+++ ++|+++|+++ +.+|..|.
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~ 198 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGL 198 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSC
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCC
Confidence 99999999999999988 9999999988 47777764
No 77
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.49 E-value=1.5e-13 Score=89.63 Aligned_cols=96 Identities=21% Similarity=0.212 Sum_probs=65.6
Q ss_pred CccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHH
Q psy229 46 DSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVS 121 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~ 121 (142)
.++++.+...+...+..++.. +++..+..+.++ ++|+..++.+++++|++.|++++..+..|.||||+|+..++.+
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred CCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 344444444444443333332 233333344444 5777888888888888888888888888888888888888888
Q ss_pred HHHHHHhCCCCcccccCCCC
Q psy229 122 VTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 122 ~~~~Ll~~ga~~~~~~~~g~ 141 (142)
++++|+++|++++.++..|.
T Consensus 154 ~v~~Ll~~g~~~~~~~~~g~ 173 (231)
T 3aji_A 154 MVHILLFYKASTNIQDTEGN 173 (231)
T ss_dssp HHHHHHHTTCCSCCCCTTSC
T ss_pred HHHHHHhcCCCccccCCCCC
Confidence 88888888888888777664
No 78
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.49 E-value=7.2e-14 Score=94.26 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=76.4
Q ss_pred CCCccccccccC---ChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q psy229 44 RPDSHLRAYTGY---GINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ 116 (142)
Q Consensus 44 ~~~~~l~~~~~~---~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~ 116 (142)
.+.++|+.+... +...+..++.. +++..+..+.++ |+|+..|+.+++++|+..|++++.+|..|.||||+|+.
T Consensus 168 ~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 247 (278)
T 1dcq_A 168 PDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKR 247 (278)
T ss_dssp TTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHH
Confidence 466888888776 66665544443 556666677777 78999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCcc
Q psy229 117 NNSVSVTQALLGFGAEVN 134 (142)
Q Consensus 117 ~~~~~~~~~Ll~~ga~~~ 134 (142)
.|+.+++++|+++|++..
T Consensus 248 ~~~~~~v~~Ll~~ga~~~ 265 (278)
T 1dcq_A 248 LKHEHCEELLTQALSGRF 265 (278)
T ss_dssp TTCHHHHHHHHHHHTTCC
T ss_pred cCCHHHHHHHHHcCCCCC
Confidence 999999999999998653
No 79
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.49 E-value=1.6e-14 Score=92.16 Aligned_cols=52 Identities=19% Similarity=0.370 Sum_probs=24.8
Q ss_pred HHHHHHHcCCCCCCCCCCCChHHHHHHHcCC------HHHHHHHHhCCCCcccccCCC
Q psy229 89 LVLSILAAGAALELKDGDGNTPLHIAAQNNS------VSVTQALLGFGAEVNVSQIPY 140 (142)
Q Consensus 89 ~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~------~~~~~~Ll~~ga~~~~~~~~g 140 (142)
++++|++.|++++.+|..|.||||+|+..++ .+++++|+++|++++.+|..|
T Consensus 57 iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g 114 (186)
T 3t8k_A 57 ISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPY 114 (186)
T ss_dssp HHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGG
T ss_pred HHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCc
Confidence 4444444444444444444445444444443 344444444444444444443
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.49 E-value=3.6e-14 Score=93.58 Aligned_cols=97 Identities=18% Similarity=0.118 Sum_probs=61.8
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...+.......+.. +++. ...+.++ +.|+..|+.+++++|+..|++++.+|..|.||||+|+..|+
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~ 82 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGH 82 (239)
T ss_dssp ----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC
Confidence 45677887877777664444443 2221 2223343 67889999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.+|..|.
T Consensus 83 ~~~v~~Ll~~ga~~~~~d~~g~ 104 (239)
T 1ycs_B 83 TEIVKFLVQFGVNVNAADSDGW 104 (239)
T ss_dssp HHHHHHHHHHTCCTTCCCTTCC
T ss_pred HHHHHHHHHcCCCCCccCCCCC
Confidence 9999999999999999998875
No 81
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.49 E-value=8.9e-14 Score=92.69 Aligned_cols=97 Identities=19% Similarity=0.183 Sum_probs=73.2
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++++.+...|...+...+.. +++..+..+.++ ++|+..++.+++++|++.|++++. +..|.||||+|+..|+
T Consensus 35 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~ 113 (261)
T 2xai_A 35 DHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGH 113 (261)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCc
Confidence 45566666666666654444433 344445555565 688889999999999999998875 4558999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+++++|+++|++++.++..|.
T Consensus 114 ~~~v~~Ll~~g~~~~~~~~~g~ 135 (261)
T 2xai_A 114 VECVNSLIAYGGNIDHKISHLG 135 (261)
T ss_dssp HHHHHHHHHTTCCTTCCBTTTB
T ss_pred HHHHHHHHHcCCCCCcCCCCCC
Confidence 9999999999999998888764
No 82
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.48 E-value=2e-13 Score=88.90 Aligned_cols=98 Identities=19% Similarity=0.202 Sum_probs=73.9
Q ss_pred CCCccccccccCChHHHHHHHHhC-----ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHc
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQHE-----PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQN 117 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~ 117 (142)
.+.++++.+...+...+...+... ++..+..+.++ +.|+..++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 150 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASV 150 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHc
Confidence 345566666666665544444432 22233334444 678889999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhCC-CCcccccCCCC
Q psy229 118 NSVSVTQALLGFG-AEVNVSQIPYF 141 (142)
Q Consensus 118 ~~~~~~~~Ll~~g-a~~~~~~~~g~ 141 (142)
++.+++++|+++| ++++.+|..|.
T Consensus 151 ~~~~~v~~Ll~~g~~~~~~~d~~g~ 175 (228)
T 2dzn_A 151 GSLKLIELLCGLGKSAVNWQDKQGW 175 (228)
T ss_dssp TCHHHHHHHHTTTCCCSCCCCTTSC
T ss_pred CCHHHHHHHHhcCcccccCcCCCCC
Confidence 9999999999999 99998888774
No 83
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.48 E-value=5.9e-14 Score=93.99 Aligned_cols=98 Identities=17% Similarity=0.230 Sum_probs=81.0
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhc--------------cCccc-hhHhhcCCHHHHHHHHH---cCCCCCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQ--------------YTHAA-TIQVAKGDKELVLSILA---AGAALEL 102 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~--------------~~~~~-~~a~~~~~~~~~~~Ll~---~~~~~~~ 102 (142)
.+.++|+.+...|...+..++.. +++..+. .+.++ ++|+..++.+++++|++ .|++++.
T Consensus 100 ~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~ 179 (273)
T 2pnn_A 100 KGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA 179 (273)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee
Confidence 57789999998888876655554 3444443 45555 78999999999999999 9999999
Q ss_pred CCCCCChHHHHHHHcCC---------HHHHHHHHhCCCCcc-------cccCCCC
Q psy229 103 KDGDGNTPLHIAAQNNS---------VSVTQALLGFGAEVN-------VSQIPYF 141 (142)
Q Consensus 103 ~~~~g~tpL~~a~~~~~---------~~~~~~Ll~~ga~~~-------~~~~~g~ 141 (142)
+|..|.||||+|+..++ .+++++|+++|++++ .+|..|.
T Consensus 180 ~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~ 234 (273)
T 2pnn_A 180 RDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGL 234 (273)
T ss_dssp CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSC
T ss_pred eCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCC
Confidence 99999999999999988 799999999999996 4777764
No 84
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.48 E-value=1.1e-13 Score=92.66 Aligned_cols=99 Identities=18% Similarity=0.192 Sum_probs=78.2
Q ss_pred CCCCccccccccC---ChHHHHHHHHh-C--Ch-----------hhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCC
Q psy229 43 PRPDSHLRAYTGY---GINTLLWYMQH-E--PQ-----------TVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKD 104 (142)
Q Consensus 43 ~~~~~~l~~~~~~---~~~~l~~~~~~-~--~~-----------~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~ 104 (142)
..+.++|+.+... |...+..++.. . +. ..+..+.++ ++|+..|+.+++++|++.|++++.++
T Consensus 52 ~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~ 131 (273)
T 2pnn_A 52 ETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAA 131 (273)
T ss_dssp TTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred cCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccc
Confidence 4567888877754 66554444433 1 11 022345555 68999999999999999999999998
Q ss_pred C--------------CCChHHHHHHHcCCHHHHHHHHh---CCCCcccccCCCC
Q psy229 105 G--------------DGNTPLHIAAQNNSVSVTQALLG---FGAEVNVSQIPYF 141 (142)
Q Consensus 105 ~--------------~g~tpL~~a~~~~~~~~~~~Ll~---~ga~~~~~~~~g~ 141 (142)
. .|.||||+|+..|+.+++++|++ +|++++.+|..|.
T Consensus 132 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~ 185 (273)
T 2pnn_A 132 NGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGN 185 (273)
T ss_dssp CSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred cccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCC
Confidence 7 79999999999999999999999 9999999998875
No 85
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.48 E-value=1.4e-13 Score=93.77 Aligned_cols=94 Identities=23% Similarity=0.099 Sum_probs=72.6
Q ss_pred cccccccCChHH-HHHHHHhC--Chh------hhccCccc-hhHhhc---CCHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q psy229 48 HLRAYTGYGINT-LLWYMQHE--PQT------VLQYTHAA-TIQVAK---GDKELVLSILAAGAALELKDGDGNTPLHIA 114 (142)
Q Consensus 48 ~l~~~~~~~~~~-l~~~~~~~--~~~------~~~~~~~~-~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a 114 (142)
+++.+...+... +..++... ++. .+..+.++ ++|+.. ++.+++++|+..|++++.+|..|.||||+|
T Consensus 154 ~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A 233 (301)
T 2b0o_E 154 RLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYA 233 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHH
T ss_pred HHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 366666666665 44444442 222 23344454 677775 899999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 115 AQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 115 ~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+..|+.+++++|+++|++++.+|..|.
T Consensus 234 ~~~g~~~~v~~Ll~~gad~~~~d~~G~ 260 (301)
T 2b0o_E 234 ALYNQPDCLKLLLKGRALVGTVNEAGE 260 (301)
T ss_dssp HHTTCHHHHHHHHHTTCCCSCCCTTSC
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 999999999999999999999998874
No 86
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.46 E-value=2.7e-13 Score=80.57 Aligned_cols=63 Identities=25% Similarity=0.336 Sum_probs=60.1
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.|+..++.+++++|++.|++++..|..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 12 ~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 74 (123)
T 3aaa_C 12 MWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHI 74 (123)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSC
T ss_pred HHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCC
Confidence 578899999999999999999999999999999999999999999999999999999998875
No 87
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.46 E-value=2.3e-13 Score=90.93 Aligned_cols=71 Identities=20% Similarity=0.231 Sum_probs=56.8
Q ss_pred ChhhhccCccc-hhHhhcCCHHHHHHHHH-cCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccC
Q psy229 68 PQTVLQYTHAA-TIQVAKGDKELVLSILA-AGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 68 ~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~-~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~ 138 (142)
++..+..+.++ ++|+..++.+++++|+. .|++++.+|..|.||||+|+..++.+++++|+++|++++.+|.
T Consensus 212 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 212 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp SSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred CCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 33344445555 67888888888888888 6888888888888999999888888999999988988888763
No 88
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.46 E-value=2.6e-13 Score=88.93 Aligned_cols=68 Identities=34% Similarity=0.379 Sum_probs=59.5
Q ss_pred cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 74 YTHAA-TIQVAKGDKELVLSILAAGAALELKD-GDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 74 ~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+.++ ++|+..++.+++++|+..|++++..+ ..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 115 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 184 (241)
T 1k1a_A 115 DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGS 184 (241)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 34444 68888999999999999999999888 7899999999999999999999999999999888774
No 89
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.46 E-value=4.7e-13 Score=87.63 Aligned_cols=96 Identities=18% Similarity=0.195 Sum_probs=69.9
Q ss_pred CccccccccCChHHHHHHHHh-C---ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 46 DSHLRAYTGYGINTLLWYMQH-E---PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 46 ~~~l~~~~~~~~~~l~~~~~~-~---~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
.++++.+...+...+...+.. . ++..+..+.++ ++|+..++.+++++|++.|++++.++..|.||||+|+..|+.
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 157 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV 157 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH
T ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH
Confidence 344444444444443333332 1 22223334444 578889999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCcccccCCCC
Q psy229 121 SVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+++++|+++|++++.+|..|.
T Consensus 158 ~~~~~Ll~~g~~~~~~~~~g~ 178 (237)
T 3b7b_A 158 DIAEILLAAKCDLHAVNIHGD 178 (237)
T ss_dssp HHHHHHHTTTCCTTCCCTTCC
T ss_pred HHHHHHHHcCCCCCCcCCCCC
Confidence 999999999999998887764
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.45 E-value=3.9e-13 Score=93.97 Aligned_cols=68 Identities=22% Similarity=0.299 Sum_probs=61.1
Q ss_pred cCccc-hhHhhcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 74 YTHAA-TIQVAKGDKELVLSILAAG-AALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 74 ~~~~~-~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+.++ ++|+..|+.+++++|+..+ ++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~ 347 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH 347 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSC
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCC
Confidence 34455 6889999999999999875 99999999999999999999999999999999999999988774
No 91
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.45 E-value=2.7e-13 Score=86.67 Aligned_cols=99 Identities=14% Similarity=0.121 Sum_probs=80.3
Q ss_pred CCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHH-HcCCCCCCCCCCCChHHHHHHHc
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSIL-AAGAALELKDGDGNTPLHIAAQN 117 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~g~tpL~~a~~~ 117 (142)
..+.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+ ..+.+++..+..|.||||+|+..
T Consensus 37 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~ 116 (201)
T 3hra_A 37 TEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEK 116 (201)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHc
Confidence 346677887777777765555444 445555556666 6889999999999999 45779999999999999999999
Q ss_pred CCHHHHHHHHhCC-CCcccccCCCC
Q psy229 118 NSVSVTQALLGFG-AEVNVSQIPYF 141 (142)
Q Consensus 118 ~~~~~~~~Ll~~g-a~~~~~~~~g~ 141 (142)
++.+++++|+++| ++++.++..|.
T Consensus 117 ~~~~~v~~Ll~~g~~~~~~~~~~g~ 141 (201)
T 3hra_A 117 GHIDNVKLLLEDGREDIDFQNDFGY 141 (201)
T ss_dssp TCHHHHHHHHHHCCCCTTCCCTTSC
T ss_pred CCHHHHHHHHHcCCCCcCCCCCCCC
Confidence 9999999999999 99999988774
No 92
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.44 E-value=2e-13 Score=93.91 Aligned_cols=70 Identities=20% Similarity=0.220 Sum_probs=52.8
Q ss_pred ChhhhccCccc-hhHhhcCCHHHHHHHHHc-CCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccc
Q psy229 68 PQTVLQYTHAA-TIQVAKGDKELVLSILAA-GAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQ 137 (142)
Q Consensus 68 ~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~ 137 (142)
++..+..+.++ ++|+..++.++++.|+.. +++++.+|..|.||||+|++.|+.+++++|+++||+++.++
T Consensus 232 ~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 232 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 33334444554 577788888888888875 77888888888888888888888888888888888887654
No 93
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.44 E-value=1.1e-13 Score=90.72 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=78.4
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhc-cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQ-YTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~-~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
.+.++++.+...+...+..++.. +++..+. .+.++ ++|+..++.+++++|+..|++++.+|..|.|||++|+..+
T Consensus 116 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 195 (236)
T 1ikn_D 116 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP 195 (236)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccC
Confidence 46678888887777775554443 4444444 55666 7899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcc--cccCCC
Q psy229 119 SVSVTQALLGFGAEVN--VSQIPY 140 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~--~~~~~g 140 (142)
+.+++++|+++|++.. ..+..|
T Consensus 196 ~~~~~~~Ll~~ga~~~~~~~~~~~ 219 (236)
T 1ikn_D 196 STRIQQQLGQLTLENLQMLPESED 219 (236)
T ss_dssp CHHHHHHHHTTSCGGGSSCCCCCT
T ss_pred chHHHHHHHHcchhhhhcCCccch
Confidence 9999999999999775 444443
No 94
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.43 E-value=5.6e-13 Score=89.99 Aligned_cols=91 Identities=21% Similarity=0.128 Sum_probs=47.3
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++|+.++..|...+...+.. +++..+..+.++ ++|+..|+.+++++|++.|++++.+|..|.||||+|+..++
T Consensus 58 ~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~ 137 (285)
T 3d9h_A 58 SDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGS 137 (285)
T ss_dssp CSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTC
T ss_pred cCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCH
Confidence 34455555555555543333332 233333334443 45555555566666555555555555555555555555555
Q ss_pred HHHHHHHHhCCCCcc
Q psy229 120 VSVTQALLGFGAEVN 134 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~ 134 (142)
.+++++|+++|++++
T Consensus 138 ~~~v~~Ll~~g~~~~ 152 (285)
T 3d9h_A 138 WDCVNLLLQHGASVQ 152 (285)
T ss_dssp HHHHHHHHHTTCCSS
T ss_pred HHHHHHHHHCCCCCC
Confidence 555555555555554
No 95
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.43 E-value=6.6e-13 Score=88.73 Aligned_cols=94 Identities=19% Similarity=0.146 Sum_probs=72.2
Q ss_pred CCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCH
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSV 120 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~ 120 (142)
+.++++.+...|...+..++.. +++..+..+.++ ++|+..|+.+++++|+..|++++..+..|.||||+|+..++.
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 118 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 118 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCH
Confidence 4567777777777765544443 344444455555 678889999999999999999998999999999999999999
Q ss_pred HHHHHHHhCCCCcccccC
Q psy229 121 SVTQALLGFGAEVNVSQI 138 (142)
Q Consensus 121 ~~~~~Ll~~ga~~~~~~~ 138 (142)
+++++|+++|++++.++.
T Consensus 119 ~~~~~Ll~~g~~~~~~~~ 136 (285)
T 1wdy_A 119 KALKFLYKRGANVNLRRK 136 (285)
T ss_dssp HHHHHHHHTTCCTTCCCC
T ss_pred HHHHHHHHhCCCcccccc
Confidence 999999999988876543
No 96
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.43 E-value=3e-13 Score=93.99 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=75.1
Q ss_pred CCCccccccccCChHHHHHHHHh---C-----ChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHH
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---E-----PQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIA 114 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~-----~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a 114 (142)
.+.++++.+...|...+..++.. + ++..+..+.++ ++|+..|+.+++++|++.|++++.+|..|.||||+|
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 251 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLS 251 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34566776766666664444443 2 44555566666 789999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCccccc
Q psy229 115 AQNNSVSVTQALLGFGAEVNVSQ 137 (142)
Q Consensus 115 ~~~~~~~~~~~Ll~~ga~~~~~~ 137 (142)
+..|+.+++++|+++|++++..+
T Consensus 252 ~~~g~~~~v~~Ll~~~~~~~~~~ 274 (364)
T 3ljn_A 252 VRAAMVLLTKELLQKTDVFLIQA 274 (364)
T ss_dssp HHTCCHHHHHHHHHHSCHHHHHT
T ss_pred HHhChHHHHHHHHHcCCchhhhc
Confidence 99999999999999998875543
No 97
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.43 E-value=2.3e-13 Score=79.90 Aligned_cols=68 Identities=32% Similarity=0.444 Sum_probs=61.9
Q ss_pred cCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 74 YTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 74 ~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~ 76 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGN 76 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCC
Confidence 34444 578889999999999999999999999999999999999999999999999999999988775
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.42 E-value=4.8e-13 Score=80.84 Aligned_cols=69 Identities=30% Similarity=0.321 Sum_probs=62.0
Q ss_pred ccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 73 QYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 73 ~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
..+.++ ++|+..++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.
T Consensus 8 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 77 (137)
T 3c5r_A 8 HRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQND 77 (137)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCC
Confidence 344454 678889999999999999999999999999999999999999999999999999999887764
No 99
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.41 E-value=5.5e-13 Score=89.72 Aligned_cols=99 Identities=19% Similarity=0.177 Sum_probs=80.9
Q ss_pred CCCCccccccccCChHHHHHHHHh----CChhhhccCccc-hhHh-----hcCCHHHHHHHHHcCCCCCCCCCCCChHHH
Q psy229 43 PRPDSHLRAYTGYGINTLLWYMQH----EPQTVLQYTHAA-TIQV-----AKGDKELVLSILAAGAALELKDGDGNTPLH 112 (142)
Q Consensus 43 ~~~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~a~-----~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~ 112 (142)
..+.++++.+...|...+...+.. +++..+..+.++ ++|+ ..++.+++++|+..|.+.+..+..|.||||
T Consensus 109 ~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh 188 (276)
T 4hbd_A 109 SNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALM 188 (276)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHH
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 457788998888888876655554 333444455555 4566 567889999999999999899999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 113 IAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 113 ~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+|+..|+.+++++|+++|++++.+|..|.
T Consensus 189 ~A~~~g~~~~v~~Ll~~gad~n~~d~~G~ 217 (276)
T 4hbd_A 189 LAVSHGRVDVVKALLACEADVNVQDDDGS 217 (276)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence 99999999999999999999999998885
No 100
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.41 E-value=9.1e-13 Score=86.05 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=75.5
Q ss_pred CCCccccccccCChHHHHHHHHh-CChhh---hccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH-EPQTV---LQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~-~~~~~---~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
.+.++++.+...+...+...+.. ..... +..+.++ ++|+..++.+++++|++.|++++..+..|.||||+|+..+
T Consensus 41 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 120 (240)
T 3eu9_A 41 ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG 120 (240)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC
Confidence 35566676666666664444443 22221 1223444 6888999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.++..|.
T Consensus 121 ~~~~~~~Ll~~~~~~~~~~~~g~ 143 (240)
T 3eu9_A 121 HTSIVAYLIAKGQDVDMMDQNGM 143 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred HHHHHHHHHhcCCCccccCCCCC
Confidence 99999999999999998887764
No 101
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.40 E-value=9.3e-13 Score=86.44 Aligned_cols=63 Identities=22% Similarity=0.208 Sum_probs=59.9
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCcccccCCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.|+..|+.+++++|+..|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 26 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~ 88 (229)
T 2vge_A 26 LDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGW 88 (229)
T ss_dssp HHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC
Confidence 468889999999999999999999999999999999999999999999999999999998875
No 102
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.40 E-value=5.4e-13 Score=77.91 Aligned_cols=87 Identities=17% Similarity=0.193 Sum_probs=69.6
Q ss_pred hhCCCCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHH
Q psy229 40 TSLPRPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAA 115 (142)
Q Consensus 40 ~~l~~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~ 115 (142)
..-.++.++++.+...+...+...+.. +++..+..+.++ ++|+..++.+++++|+..|++++.+|..|.||||+|+
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISI 98 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHH
Confidence 334467788888888888775555544 444455556666 6899999999999999999999999999999999999
Q ss_pred HcCCHHHHHHH
Q psy229 116 QNNSVSVTQAL 126 (142)
Q Consensus 116 ~~~~~~~~~~L 126 (142)
..++.+++++|
T Consensus 99 ~~~~~~~~~~L 109 (110)
T 2zgd_A 99 DNGNEDLAEIL 109 (110)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHh
Confidence 99999999987
No 103
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.38 E-value=1.1e-12 Score=90.18 Aligned_cols=87 Identities=17% Similarity=0.090 Sum_probs=64.2
Q ss_pred CCccccccccCChHHHHHHHHh----CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH----EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
+.++|+.+...+...+...+.. +++..+..+.|+ ++|+..|+.+++++|++.|++++.+ +|||+|+..++
T Consensus 239 g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L~~A~~~~~ 313 (337)
T 4g8k_A 239 GKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLVMTARRNYD 313 (337)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHHHHHHHTTC
T ss_pred CCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHHHHHHHcCC
Confidence 3455555555555543333332 344555566666 6899999999999999999998765 59999999999
Q ss_pred HHHHHHHHhCCCCcccc
Q psy229 120 VSVTQALLGFGAEVNVS 136 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~ 136 (142)
.+++++|+++||+++..
T Consensus 314 ~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 314 HSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HHHHHHHHHTTCCC---
T ss_pred HHHHHHHHHCcCCCCCC
Confidence 99999999999999863
No 104
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.38 E-value=1e-13 Score=90.28 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=60.7
Q ss_pred CCccccccccCChHHHHHHHHh----CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 45 PDSHLRAYTGYGINTLLWYMQH----EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 45 ~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
+.++|+.+...+...+..++.. +++..+..+.++ ++|+..|+.+++++|+..|++++.+|..|.|||++|+..+.
T Consensus 106 g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 106 GSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp SCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH
Confidence 3455555555555544433332 233444555555 68999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCcccccCCCC
Q psy229 120 VSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 120 ~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
.++++.|+..|+....+|..||
T Consensus 186 ~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 186 ASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHC-----------------
T ss_pred HHHHHHHhccchhhhccchhhh
Confidence 9999999999999998887765
No 105
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.38 E-value=4.8e-13 Score=91.20 Aligned_cols=90 Identities=13% Similarity=0.072 Sum_probs=72.9
Q ss_pred CCCccccccccC---ChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHH
Q psy229 44 RPDSHLRAYTGY---GINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQ 116 (142)
Q Consensus 44 ~~~~~l~~~~~~---~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~ 116 (142)
.+.++|+.+... +...+..++.. +++..+..+.++ ++|+..|+.+++++|+..|++++.+|..|.|||++|+.
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~ 268 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 268 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHH
T ss_pred CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 345667777654 55654444443 455566667776 78999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhCCCCc
Q psy229 117 NNSVSVTQALLGFGAEV 133 (142)
Q Consensus 117 ~~~~~~~~~Ll~~ga~~ 133 (142)
.++.+++++|+++|++.
T Consensus 269 ~~~~~iv~~Ll~~ga~~ 285 (301)
T 2b0o_E 269 KHHKECEELLEQAQAGT 285 (301)
T ss_dssp HTCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHhcCCC
Confidence 99999999999998764
No 106
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.38 E-value=1.7e-12 Score=87.67 Aligned_cols=91 Identities=22% Similarity=0.209 Sum_probs=74.2
Q ss_pred ccccccCChHHHHHHHHh-CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHH
Q psy229 49 LRAYTGYGINTLLWYMQH-EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQAL 126 (142)
Q Consensus 49 l~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~L 126 (142)
+..........+..++.. +++..+..+.++ ++|+..|+.+++++|+..|++++.. .|.||||+|+..|+.+++++|
T Consensus 4 ls~i~~~~~~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~g~t~L~~A~~~g~~~~v~~L 81 (285)
T 3kea_A 4 LSRINTWKSKQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKIL 81 (285)
T ss_dssp CTTGGGCCHHHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC--TTCCHHHHHTTSSSCHHHHHH
T ss_pred cHHHHhcCHHHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC--CCCCHHHHHHHcCCHHHHHHH
Confidence 333444555566666655 555666666666 6889999999999999999999887 489999999999999999999
Q ss_pred HhCCCCcccccCCCC
Q psy229 127 LGFGAEVNVSQIPYF 141 (142)
Q Consensus 127 l~~ga~~~~~~~~g~ 141 (142)
+++|++++.++..|.
T Consensus 82 l~~ga~~~~~d~~g~ 96 (285)
T 3kea_A 82 LFSGLDDSQFDDKGN 96 (285)
T ss_dssp HHTTCCTTCCCTTSC
T ss_pred HHCCCCCCCcCCCCC
Confidence 999999999988875
No 107
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.37 E-value=2.3e-12 Score=90.03 Aligned_cols=90 Identities=16% Similarity=0.202 Sum_probs=75.3
Q ss_pred CCCccccccccCChHHHHHHHHh----CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH----EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~ 118 (142)
.+.++++.+...|...+..++.. +++..+..+.++ ++|+..|+.+++++|+..|++++.+|..|.|||++|+..|
T Consensus 278 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 278 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp CCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred cCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcC
Confidence 46789999999888886655553 455556666676 6899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhCCCCc
Q psy229 119 SVSVTQALLGFGAEV 133 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~ 133 (142)
+.+++++|+++|++.
T Consensus 358 ~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 358 HHNIVDIFDRCRPER 372 (373)
T ss_dssp CHHHHHHHHTTC---
T ss_pred CHHHHHHHHhcCccc
Confidence 999999999999864
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.31 E-value=3.5e-13 Score=89.16 Aligned_cols=66 Identities=18% Similarity=0.193 Sum_probs=59.8
Q ss_pred Cccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccc-CCCC
Q psy229 75 THAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQ-IPYF 141 (142)
Q Consensus 75 ~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~-~~g~ 141 (142)
+.++ +.|+..|+.++++.|+. |++++.+|..|.||||+|+..|+.+++++|+++|++++.++ ..|+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~ 112 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGL 112 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 4444 67889999999999999 99999999999999999999999999999999999999888 6564
No 109
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.30 E-value=1.6e-11 Score=80.14 Aligned_cols=98 Identities=17% Similarity=0.175 Sum_probs=78.3
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHHcC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKD-GDGNTPLHIAAQNN 118 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~tpL~~a~~~~ 118 (142)
.+.++++.+...|...+...+.. +++..+..+.++ ++|+..++.+++++|++.+.+++..+ ..|.||||+|+..+
T Consensus 8 ~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~ 87 (240)
T 3eu9_A 8 YSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQG 87 (240)
T ss_dssp GGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHT
T ss_pred ccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcC
Confidence 45677888888888875555443 344444455555 68899999999999999999877554 45999999999999
Q ss_pred CHHHHHHHHhCCCCcccccCCCC
Q psy229 119 SVSVTQALLGFGAEVNVSQIPYF 141 (142)
Q Consensus 119 ~~~~~~~Ll~~ga~~~~~~~~g~ 141 (142)
+.+++++|+++|++++.++..|.
T Consensus 88 ~~~~v~~Ll~~g~~~~~~~~~g~ 110 (240)
T 3eu9_A 88 HLSMVVQLMKYGADPSLIDGEGC 110 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CHHHHHHHHHcCCCCcccCCCCC
Confidence 99999999999999998888764
No 110
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.29 E-value=4.4e-12 Score=88.68 Aligned_cols=88 Identities=17% Similarity=0.141 Sum_probs=71.5
Q ss_pred CCCccccccccCChHHHHHHHHh---CChhhhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQH---EPQTVLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS 119 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~ 119 (142)
.+.++|+.+...+...+..++.. +++..+..+.++ |+|+..++.+++++|+..|++++.+|..|.||||+|+..++
T Consensus 234 ~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~ 313 (368)
T 3jue_A 234 DNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313 (368)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCC
Confidence 45566777766666665544444 455556666666 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCC
Q psy229 120 VSVTQALLGFGA 131 (142)
Q Consensus 120 ~~~~~~Ll~~ga 131 (142)
.+++++|+..+.
T Consensus 314 ~~iv~lLl~~~~ 325 (368)
T 3jue_A 314 ADIVTLLRLAKM 325 (368)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHcCC
Confidence 999999998763
No 111
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.27 E-value=1.2e-11 Score=78.25 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=57.9
Q ss_pred hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCCHHHHHHHHhCCCCccccc-CCCC
Q psy229 79 TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNSVSVTQALLGFGAEVNVSQ-IPYF 141 (142)
Q Consensus 79 ~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~~~~~~~Ll~~ga~~~~~~-~~g~ 141 (142)
+.|+..|+.++++.|+. +++++.+|..|.||||+|+..|+.+++++|+++|++++.++ ..|.
T Consensus 49 ~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~ 111 (183)
T 3deo_A 49 WTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGL 111 (183)
T ss_dssp HHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSC
T ss_pred HHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCC
Confidence 57888999999999999 99999999999999999999999999999999999999887 6664
No 112
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.23 E-value=1.2e-11 Score=85.12 Aligned_cols=91 Identities=13% Similarity=0.028 Sum_probs=70.6
Q ss_pred ccccCChHHHHHHHHh---CChh-hhccCccc-hhHhhcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHHcCC---HHH
Q psy229 51 AYTGYGINTLLWYMQH---EPQT-VLQYTHAA-TIQVAKGDKELVLSILAAGAALELKDGDGNTPLHIAAQNNS---VSV 122 (142)
Q Consensus 51 ~~~~~~~~~l~~~~~~---~~~~-~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~tpL~~a~~~~~---~~~ 122 (142)
++...+...+...+.. +++. .+..+.++ |+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+ .++
T Consensus 103 ~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~ 182 (327)
T 1sw6_A 103 VSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGT 182 (327)
T ss_dssp -CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTC
T ss_pred HHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHH
Confidence 3333334444444443 4444 55666666 68899999999999999999999999999999999999998 678
Q ss_pred HHHHHhCC-CCcccccCCCC
Q psy229 123 TQALLGFG-AEVNVSQIPYF 141 (142)
Q Consensus 123 ~~~Ll~~g-a~~~~~~~~g~ 141 (142)
++.|+.++ ++++.+|..|.
T Consensus 183 ~~~ll~~~~~~~~~~d~~g~ 202 (327)
T 1sw6_A 183 FEALLDYLYPCLILEDSMNR 202 (327)
T ss_dssp HHHHHHHHGGGGGEECTTCC
T ss_pred HHHHHHhhhccccCCCCCCC
Confidence 88888886 78999988875
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.16 E-value=1.6e-12 Score=91.12 Aligned_cols=91 Identities=10% Similarity=0.067 Sum_probs=58.3
Q ss_pred CCCccccccccCChHHHHHHHHhCCh------hhhccCccc-hhHhhcCCHHHHHHHHHcCCCC---CCCCCCCChHHHH
Q psy229 44 RPDSHLRAYTGYGINTLLWYMQHEPQ------TVLQYTHAA-TIQVAKGDKELVLSILAAGAAL---ELKDGDGNTPLHI 113 (142)
Q Consensus 44 ~~~~~l~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~-~~a~~~~~~~~~~~Ll~~~~~~---~~~~~~g~tpL~~ 113 (142)
...++++.++..|...+...+..... ..+..+.++ ++|+..|+.+++++|++.|+++ +..+.. .||||+
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~ 169 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRL 169 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHH
Confidence 34577777777777775555554221 222233334 5777788888888888887642 222222 788888
Q ss_pred HHHcCCHHHHHHHHhCCCCccc
Q psy229 114 AAQNNSVSVTQALLGFGAEVNV 135 (142)
Q Consensus 114 a~~~~~~~~~~~Ll~~ga~~~~ 135 (142)
|+..|+.+++++|+++|++++.
T Consensus 170 Aa~~G~~eiv~~Ll~~ga~~~~ 191 (376)
T 2aja_A 170 AAENGHLHVLNRLCELAPTEAT 191 (376)
T ss_dssp HHHTTCHHHHHHHHHSCGGGHH
T ss_pred HHHCCCHHHHHHHHHcCCccch
Confidence 8888888888888888887654
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.13 E-value=4.3e-12 Score=88.99 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=76.6
Q ss_pred cccCChHHHhhCCCCCc--------------cccccccCChHHHHHHHHh-CCh----hhhccCccc-hhHhhcCCHHHH
Q psy229 31 DTRCDHAYLTSLPRPDS--------------HLRAYTGYGINTLLWYMQH-EPQ----TVLQYTHAA-TIQVAKGDKELV 90 (142)
Q Consensus 31 ~~~~~~~~~~~l~~~~~--------------~l~~~~~~~~~~l~~~~~~-~~~----~~~~~~~~~-~~a~~~~~~~~~ 90 (142)
...+..++++.+.+.+. +++.++..|+..+..++.. .++ .....+.++ ++|+..|+.+++
T Consensus 100 a~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv 179 (376)
T 2aja_A 100 AITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVL 179 (376)
T ss_dssp HHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHH
Confidence 44555666776665544 7888888888886665555 321 222222445 789999999999
Q ss_pred HHHHHcCCCCCC--CCCCCChHHHHHH-HcCCHHHHHHHHhCCCC
Q psy229 91 LSILAAGAALEL--KDGDGNTPLHIAA-QNNSVSVTQALLGFGAE 132 (142)
Q Consensus 91 ~~Ll~~~~~~~~--~~~~g~tpL~~a~-~~~~~~~~~~Ll~~ga~ 132 (142)
++|++.|++++. .|..|.||||+|+ ..|+.+++++|+++|++
T Consensus 180 ~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 180 NRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred HHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 999999999877 8888999999999 99999999999987743
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=45.49 E-value=21 Score=16.11 Aligned_cols=16 Identities=25% Similarity=0.231 Sum_probs=11.8
Q ss_pred HHHHHcCCHHHHHHHH
Q psy229 112 HIAAQNNSVSVTQALL 127 (142)
Q Consensus 112 ~~a~~~~~~~~~~~Ll 127 (142)
-.||+.|+.+.++.|-
T Consensus 18 yvA~seGd~etv~~Le 33 (40)
T 1gp8_A 18 DAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHTTSCHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHH
Confidence 4577788888887774
Done!