BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2295
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3V0C5|UBP48_MOUSE Ubiquitin carboxyl-terminal hydrolase 48 OS=Mus musculus GN=Usp48
PE=1 SV=2
Length = 1052
Score = 246 bits (628), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 136/267 (50%), Positives = 167/267 (62%), Gaps = 7/267 (2%)
Query: 15 CI--ISSRNCKGNPFCLASLGESRWFNEQKHDSSDDFD-PDQELRDPNEFIGLKNLGATC 71
CI + RNC+GNP CL +GE W E +S D P+ E R N F+GL NLGATC
Sbjct: 39 CIRGVCRRNCRGNPNCLVGIGEHIWLGEIDENSFHSIDDPNCERRKKNSFVGLTNLGATC 98
Query: 72 YVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIGHLQMLFALMQH 131
YVN+ LQ+WF NL R+A L P S+ + YEPQT HLQ LFAL+Q+
Sbjct: 99 YVNTFLQVWFLNLELRQA-LYLCPSTCSDYTKGDGIHGGKDYEPQTICEHLQYLFALLQN 157
Query: 132 SNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGE 191
SN+ +DP+ FV LGLD QQDAQEFSKLF+S +E+ Q P ++N ++ F GE
Sbjct: 158 SNRRYIDPSGFVKALGLDTGQQQDAQEFSKLFMS-LLEDTLSKQKNPDVRNVVQQQFCGE 216
Query: 192 YVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNRCGKK 249
Y YVT C CG E+ FYEL +N+ K L + + EFLKEE LEGD++YFC C K
Sbjct: 217 YAYVTVCNQCGRESKLVSKFYELELNIQGHKQLTDCISEFLKEERLEGDNRYFCENCQSK 276
Query: 250 QNAGRRIRLKYLPKVLNLQLMRFVFDR 276
QNA R+IRL LP LNLQLMRFVFDR
Sbjct: 277 QNATRKIRLLSLPCTLNLQLMRFVFDR 303
>sp|Q86UV5|UBP48_HUMAN Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo sapiens GN=USP48
PE=1 SV=1
Length = 1035
Score = 245 bits (626), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 137/267 (51%), Positives = 168/267 (62%), Gaps = 7/267 (2%)
Query: 15 CI--ISSRNCKGNPFCLASLGESRWFNEQKHDSSDDFD-PDQELRDPNEFIGLKNLGATC 71
CI + RNCKGNP CL +GE W E +S + D P+ E R N F+GL NLGATC
Sbjct: 39 CIRGVCRRNCKGNPNCLVGIGEHIWLGEIDENSFHNIDDPNCERRKKNSFVGLTNLGATC 98
Query: 72 YVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIGHLQMLFALMQH 131
YVN+ LQ+WF NL R+A L P S+ + YEPQT HLQ LFAL+Q+
Sbjct: 99 YVNTFLQVWFLNLELRQA-LYLCPSTCSDYMLGDGIQEEKDYEPQTICEHLQYLFALLQN 157
Query: 132 SNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGE 191
SN+ +DP+ FV LGLD QQDAQEFSKLF+S +E+ Q P ++N ++ F GE
Sbjct: 158 SNRRYIDPSGFVKALGLDTGQQQDAQEFSKLFMS-LLEDTLSKQKNPDVRNIVQQQFCGE 216
Query: 192 YVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNRCGKK 249
Y YVT C CG E+ FYEL +N+ K L + + EFLKEE LEGD++YFC C K
Sbjct: 217 YAYVTVCNQCGRESKLLSKFYELELNIQGHKQLTDCISEFLKEEKLEGDNRYFCENCQSK 276
Query: 250 QNAGRRIRLKYLPKVLNLQLMRFVFDR 276
QNA R+IRL LP LNLQLMRFVFDR
Sbjct: 277 QNATRKIRLLSLPCTLNLQLMRFVFDR 303
>sp|Q5ZM45|UBP48_CHICK Ubiquitin carboxyl-terminal hydrolase 48 OS=Gallus gallus GN=USP48
PE=2 SV=1
Length = 1033
Score = 245 bits (625), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/260 (50%), Positives = 166/260 (63%), Gaps = 7/260 (2%)
Query: 20 RNCKGNPFCLASLGESRWFNEQKHDSSDDFD-PDQELRDPNEFIGLKNLGATCYVNSLLQ 78
RNC+GNP CL +GE W E +S + D P+ E R N F+GL NLGATCYVN+ LQ
Sbjct: 46 RNCRGNPNCLVGIGEHVWLGEIDENSFHNIDDPNCERRKKNAFVGLTNLGATCYVNTFLQ 105
Query: 79 LWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIGHLQMLFALMQHSNKLLVD 138
+WF NL R+A+ + E + ++ P YEPQT HLQ LFAL+Q+S + +D
Sbjct: 106 MWFLNLELRQALYLCSSNEHAAGESIPK---DKDYEPQTICEHLQYLFALLQNSKRRYID 162
Query: 139 PTDFVLTLGLDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGEYVYVTKC 198
P+ FV LGLD QQDAQEFSKLF+S +E+ Q P ++N ++ F GEY YVT C
Sbjct: 163 PSGFVKALGLDTGQQQDAQEFSKLFMS-LLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVC 221
Query: 199 FACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRI 256
CG E+ FYEL +N+ K L + + EFLKEE LEGD++YFC C KQNA R+I
Sbjct: 222 NQCGRESKLVSKFYELELNIQGHKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKI 281
Query: 257 RLKYLPKVLNLQLMRFVFDR 276
RL LP LNLQLMRFVFDR
Sbjct: 282 RLLSLPCTLNLQLMRFVFDR 301
>sp|Q76LT8|UBP48_RAT Ubiquitin carboxyl-terminal hydrolase 48 OS=Rattus norvegicus
GN=Usp48 PE=1 SV=1
Length = 1036
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 167/267 (62%), Gaps = 7/267 (2%)
Query: 15 CI--ISSRNCKGNPFCLASLGESRWFNEQKHDSSDDFD-PDQELRDPNEFIGLKNLGATC 71
CI + RNC+GNP CL +GE W E +S + D P+ E R N F+GL NLGA+C
Sbjct: 39 CIRGVCRRNCRGNPNCLVGIGEHIWLGEIDENSFHNIDDPNCERRKKNSFVGLTNLGASC 98
Query: 72 YVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIGHLQMLFALMQH 131
YVN+ LQ+WF NL R+A L P S+ + YEPQT HLQ LFAL+Q+
Sbjct: 99 YVNTFLQVWFLNLELRQA-LYLCPSTCSDYTKGDGIRGGKDYEPQTICEHLQYLFALLQN 157
Query: 132 SNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGE 191
SN+ +DP+ FV LGLD QQDAQE SKLF+S +E+ Q P ++N ++ F GE
Sbjct: 158 SNRRYIDPSGFVKALGLDTGQQQDAQESSKLFMS-LLEDTLSKQKNPDVRNVVQQQFCGE 216
Query: 192 YVYVTKCFACGNETDRSEIFYELVVNVC--KTLDESMREFLKEELLEGDDQYFCNRCGKK 249
Y YVT C CG E+ FYEL +N+ K L + + EFLKEE LEGD++YFC C K
Sbjct: 217 YAYVTVCSQCGRESKLVSKFYELELNIQGHKQLTDCISEFLKEERLEGDNRYFCENCQSK 276
Query: 250 QNAGRRIRLKYLPKVLNLQLMRFVFDR 276
QNA R+IRL LP LNLQLMRFVFDR
Sbjct: 277 QNATRKIRLLSLPCTLNLQLMRFVFDR 303
>sp|A3AF13|UBP26_ORYSJ Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
japonica GN=UBP26 PE=2 SV=2
Length = 1079
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 50 DPDQELRDPNEF-IGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG 108
+P +LRD E GL NLGATCY NS+LQ + N FR + P
Sbjct: 93 NPSTDLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIFSLEP------------- 139
Query: 109 FSGFYEPQTAIGHLQMLFALMQHSNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFV 168
+ + L LFA + S +D F+ TL LD QQD+ EF LFLS +
Sbjct: 140 --DILKMHPVLDQLARLFAQLHSSKMAFIDSAPFIKTLELDNGVQQDSHEFLTLFLS-LL 196
Query: 169 EEKFRVQSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRS---EIFYELVVNV--CKTLD 223
E +P + ++ F G +VT+C +CG +++ S E FYEL +N+ L+
Sbjct: 197 EGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLNNLE 256
Query: 224 ESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVF 274
+S+ ++L E L+G++QYFC C K+ +A R I+L+ LP V+N QL R+VF
Sbjct: 257 QSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVF 307
>sp|A2XDG4|UBP26_ORYSI Ubiquitin carboxyl-terminal hydrolase 26 OS=Oryza sativa subsp.
indica GN=UBP26 PE=2 SV=1
Length = 1079
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 121/231 (52%), Gaps = 22/231 (9%)
Query: 50 DPDQELRDPNEF-IGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG 108
+P +LRD E GL NLGATCY NS+LQ + N FR + P
Sbjct: 93 NPSTDLRDSTETPAGLTNLGATCYANSILQCLYMNTSFRLGIFSLEP------------- 139
Query: 109 FSGFYEPQTAIGHLQMLFALMQHSNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFV 168
+ + L LFA + S +D F+ TL LD QQD+ EF LFLS +
Sbjct: 140 --DILKMHPVLDQLARLFAQLHSSKMAFIDSAPFIKTLELDNGVQQDSHEFLTLFLS-LL 196
Query: 169 EEKFRVQSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRS---EIFYELVVNV--CKTLD 223
E +P + ++ F G +VT+C +CG +++ S E FYEL +N+ L+
Sbjct: 197 EGSLSHSKVPGARTIVQHLFRGSVSHVTRCSSCGRDSEASSKMEDFYELELNIKGLNNLE 256
Query: 224 ESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVF 274
+S+ ++L E L+G++QYFC C K+ +A R I+L+ LP V+N QL R+VF
Sbjct: 257 QSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLKRYVF 307
>sp|Q9SCJ9|UBP26_ARATH Ubiquitin carboxyl-terminal hydrolase 26 OS=Arabidopsis thaliana
GN=UBP26 PE=1 SV=3
Length = 1067
Score = 128 bits (321), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/268 (36%), Positives = 128/268 (47%), Gaps = 31/268 (11%)
Query: 21 NCKGNPFC----LASLGESR----WFNEQKHDSSDDFDPDQELRDPNEF-IGLKNLGATC 71
N + NP C + L SR W + S DP + RD GL NLGATC
Sbjct: 56 NTRDNPNCFCGLVPPLNGSRKSGLWQKTSEIIQSLGPDPTLDRRDSESTPAGLTNLGATC 115
Query: 72 YVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIGHLQMLFALMQH 131
Y NS+LQ + N FR+ V E K NP L + LFA +
Sbjct: 116 YANSILQCLYMNTAFREGVFS---VEVHVLKQNPVLD------------QIARLFAQLHA 160
Query: 132 SNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGE 191
S K VD FV TL LD QQD EF L LS + + S K ++D FSG
Sbjct: 161 SQKSFVDSDAFVKTLELDNGVQQDTHEFLTLLLSLLE--RCLLHSGVKAKTIVQDLFSGS 218
Query: 192 YVYVTKCFACGNETDRS---EIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNRC 246
+VT C CG +++ S E FY L +NV K+LD S+ ++L E L GD+QYFC C
Sbjct: 219 VSHVTTCSKCGRDSEASSKMEDFYALELNVKGLKSLDASLNDYLSLEQLNGDNQYFCGSC 278
Query: 247 GKKQNAGRRIRLKYLPKVLNLQLMRFVF 274
+ +A R I+L+ LP V+ QL R +F
Sbjct: 279 NARVDATRCIKLRTLPPVITFQLKRCIF 306
>sp|Q24574|UBPE_DROME Ubiquitin carboxyl-terminal hydrolase 64E OS=Drosophila
melanogaster GN=Ubp64E PE=1 SV=2
Length = 1556
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 29/229 (12%)
Query: 58 PNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQT 117
P ++GL N TCY+NSLLQ F FR A+ W D+E KN P
Sbjct: 392 PRGYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRWEFDNDNEAKNIPY----------- 440
Query: 118 AIGHLQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRV 174
LQ LF +Q S K V+ TD + G D + Q D QE ++ + +E KF+
Sbjct: 441 ---QLQKLFLNLQTSPKAAVETTDLTRSFGWDSTEAWQQHDIQELCRVMF-DALEHKFKN 496
Query: 175 QSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--------CKTLDESM 226
N I + + G+ KC C E R + F ++ + V +++E++
Sbjct: 497 TKQ---ANLISNLYEGKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEAL 553
Query: 227 REFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
R F++ E L+G++QY C +C KK +A + + K P +L L L RF FD
Sbjct: 554 RAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRFDFD 602
>sp|Q8BY87|UBP47_MOUSE Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus GN=Usp47
PE=1 SV=2
Length = 1376
Score = 111 bits (277), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 117/227 (51%), Gaps = 29/227 (12%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GL N TCY+NSLLQ F FR A+ W EDSEE +P T+I
Sbjct: 187 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWE-FEDSEE------------DPVTSIP 233
Query: 121 H-LQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQS 176
+ LQ LF L+Q S K ++ TD + G D S Q D QE ++ + +E+K++
Sbjct: 234 YQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMF-DALEQKWKQTE 292
Query: 177 LPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVV--------NVCKTLDESMRE 228
+ I + + G+ +C CG E R + + ++ + +++E++
Sbjct: 293 QA---DLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHA 349
Query: 229 FLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
F++ E+L+G +QYFC RC KK +A + +R + P +L LQL RF FD
Sbjct: 350 FIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFD 396
>sp|Q96K76|UBP47_HUMAN Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens GN=USP47
PE=1 SV=3
Length = 1375
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 29/227 (12%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GL N TCY+NSLLQ F FR A+ W E+SEE +P T+I
Sbjct: 187 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWE-FEESEE------------DPVTSIP 233
Query: 121 H-LQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQS 176
+ LQ LF L+Q S K ++ TD + G D S Q D QE ++ + +E+K++
Sbjct: 234 YQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMF-DALEQKWKQTE 292
Query: 177 LPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYE--LVV------NVCKTLDESMRE 228
+ I + + G+ +C CG E R + + + LV+ +++E++
Sbjct: 293 QA---DLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVEEALHA 349
Query: 229 FLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
F++ E+L+G +QYFC RC KK +A + +R + P +L LQL RF FD
Sbjct: 350 FIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFD 396
>sp|E1C1R4|UBP47_CHICK Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus GN=USP47
PE=3 SV=1
Length = 1375
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 116/227 (51%), Gaps = 29/227 (12%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GL N TCY+NSLLQ F FR A+ W E+SEE +P T+I
Sbjct: 186 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWE-FEESEE------------DPVTSIP 232
Query: 121 H-LQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQS 176
+ LQ LF L+Q S K ++ TD + G D S Q D QE ++ + +E+K++
Sbjct: 233 YQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMF-DALEQKWKQTE 291
Query: 177 LPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVV--------NVCKTLDESMRE 228
+ I + G+ +C CG E R + + ++ + +++E++
Sbjct: 292 QA---DLINQLYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHA 348
Query: 229 FLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
F++ E+L+G +QYFC RC KK +A + +R + P +L LQL RF FD
Sbjct: 349 FIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFD 395
>sp|A1A5G2|UBP47_XENTR Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus tropicalis
GN=usp47 PE=2 SV=1
Length = 1354
Score = 107 bits (268), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 27/226 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GL N TCY+NSLLQ F FR A+ W E+SEE S+ +
Sbjct: 173 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWE-FEESEEDPVSSIPY----------- 220
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ LF L+Q S K ++ TD + G D S Q D QE ++ + +E+K++
Sbjct: 221 QLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMF-DALEQKWKQT-- 277
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVV--------NVCKTLDESMREF 229
+ I + G+ KC CG E+ R + F ++ + +++E+++ F
Sbjct: 278 -EQADLINQLYQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPFGSNTAFGSMEEALQAF 336
Query: 230 LKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
++ E L+G +QYFC RC +K +A + ++ + P +L LQL RF FD
Sbjct: 337 IQPETLDGPNQYFCERCKRKCDARKGLKFLHFPYLLTLQLKRFDFD 382
>sp|Q5U252|UBP47_XENLA Ubiquitin carboxyl-terminal hydrolase 47 OS=Xenopus laevis GN=usp47
PE=2 SV=1
Length = 1350
Score = 107 bits (267), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 113/226 (50%), Gaps = 27/226 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GL N TCY+NSLLQ F FR A+ W E+SEE S+ +
Sbjct: 172 YVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWE-FEESEEDPVSSIPY----------- 219
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ LF L+Q S K ++ TD + G D S Q D QE ++ + +E+K++
Sbjct: 220 QLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMF-DALEQKWKQT-- 276
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVV--------NVCKTLDESMREF 229
+ I + G+ KC CG E+ R + F ++ + +++E++ F
Sbjct: 277 -EQADLINQLYQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAF 335
Query: 230 LKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
++ E L+G +QYFC RC +K +A + ++ + P +L LQL RF FD
Sbjct: 336 IQPETLDGPNQYFCERCKRKCDARKGLKFLHFPYLLTLQLKRFDFD 381
>sp|Q6ZQ93|UBP34_MOUSE Ubiquitin carboxyl-terminal hydrolase 34 OS=Mus musculus GN=Usp34
PE=1 SV=3
Length = 3582
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 29/236 (12%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSL 107
D+ P +++R F+GL NLGATCY+ S +Q + R+AV ED + K
Sbjct: 1917 DYWPHEDVRAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSEDMKHK----- 1971
Query: 108 GFSGFYEPQTAIGHLQMLFALMQHSNKLLVDPTDFVLTLGLDR-----SYQQDAQEFSKL 162
T + LQ +F + S +P F T +D+ Q+D EF
Sbjct: 1972 ---------TTLLELQKMFTYLMESECKAYNPRPFCKTYTMDKQPLNTGEQKDMTEF--- 2019
Query: 163 FLSNFVEEKFRVQSL-PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNVC-- 219
F + +V+ + P +KN +K F G C + + +E FY + V
Sbjct: 2020 ----FTDLITKVEEMSPELKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVADM 2075
Query: 220 KTLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
K + ES+ E ++ LEGD+ Y C+ CGKK A +R K LP++L+ MR+ F+
Sbjct: 2076 KNIYESLDEVTIKDTLEGDNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFN 2131
>sp|Q70CQ2|UBP34_HUMAN Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens GN=USP34
PE=1 SV=2
Length = 3546
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 106/235 (45%), Gaps = 27/235 (11%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSL 107
D+ P +++R F+GL NLGATCY+ S +Q + R+AV ED + K
Sbjct: 1880 DYWPHEDVRAECRFVGLTNLGATCYLASTIQQLYMIPEARQAVFTAKYSEDMKHK----- 1934
Query: 108 GFSGFYEPQTAIGHLQMLFALMQHSNKLLVDPTDFVLTLGLDR-----SYQQDAQEFSKL 162
T + LQ +F + S +P F T +D+ Q+D EF
Sbjct: 1935 ---------TTLLELQKMFTYLMESECKAYNPRPFCKTYTMDKQPLNTGEQKDMTEFFTD 1985
Query: 163 FLSNFVEEKFRVQSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNVC--K 220
++ E P +KN +K F G C + + +E FY + V K
Sbjct: 1986 LITKIEEMS------PELKNTVKSLFGGVITNNVVSLDCEHVSQTAEEFYTVRCQVADMK 2039
Query: 221 TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+ ES+ E ++ LEGD+ Y C+ CGKK A +R K LP++L+ MR+ F+
Sbjct: 2040 NIYESLDEVTIKDTLEGDNMYTCSHCGKKVRAEKRACFKKLPRILSFNTMRYTFN 2094
>sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus
GN=Usp7 PE=1 SV=1
Length = 1103
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GLKN GATCY+NSLLQ F RKAV D K+ P
Sbjct: 214 YVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSKSVPLA------------- 260
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ +F +QHS+K V + G LD Q D QE ++ L N VE K +
Sbjct: 261 -LQRVFYELQHSDK-PVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDN-VENKMKGTC- 316
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++ I F G+ V +C +DR E +Y++ +++ K + ES +++ E L
Sbjct: 317 --VEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQL 374
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+GD++Y G Q A + ++ LP VL+LQLMRF++D
Sbjct: 375 DGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFMYD 413
>sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7
PE=1 SV=2
Length = 1102
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GLKN GATCY+NSLLQ F RKAV D K+ P
Sbjct: 213 YVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSKSVPLA------------- 259
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ +F +QHS+K V + G LD Q D QE ++ L N VE K +
Sbjct: 260 -LQRVFYELQHSDK-PVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDN-VENKMKGTC- 315
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++ I F G+ V +C +DR E +Y++ +++ K + ES +++ E L
Sbjct: 316 --VEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQL 373
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+GD++Y G Q A + ++ LP VL+LQLMRF++D
Sbjct: 374 DGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFMYD 412
>sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7
PE=1 SV=1
Length = 1103
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GLKN GATCY+NSLLQ F RKAV D K+ P
Sbjct: 214 YVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSKSVPLA------------- 260
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ +F +QHS+K V + G LD Q D QE ++ L N VE K +
Sbjct: 261 -LQRVFYELQHSDK-PVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDN-VENKMKGTC- 316
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++ I F G+ V +C +DR E +Y++ +++ K + ES +++ E L
Sbjct: 317 --VEGTIPKLFRGKMVSYIQCKDVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQL 374
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+GD++Y G Q A + ++ LP VL+LQLMRF++D
Sbjct: 375 DGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFMYD 413
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 115/220 (52%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GLKN GATCY+NSLLQ F FRK V P ++ + ++ S+ ++
Sbjct: 229 YVGLKNQGATCYMNSLLQSLFFTNIFRKTVYKI-PTDNDDSRD--SVAYA---------- 275
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ +F ++ + V T+ + G D Q D QEF+++ N +E+K +
Sbjct: 276 -LQRVFYNLE-KQREPVSTTELTRSFGWNSFDSFMQHDIQEFNRVLQDN-LEKKMKGTE- 331
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++N + D F G+ KC E+ R E F+++ +NV TL++S R+ ++ E L
Sbjct: 332 --VENALNDIFVGKMKSYVKCIDVNYESSRVEDFWDIQLNVKGMDTLEDSFRDAIQVETL 389
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
GD++Y+ G Q+A + I + LP VL LQL RF +D
Sbjct: 390 TGDNKYYAEGHG-LQDAHKGIIFESLPNVLQLQLKRFDYD 428
>sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7
PE=2 SV=1
Length = 1101
Score = 91.3 bits (225), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GLKN GATCY+NSLLQ F RKAV D K+ P
Sbjct: 213 YVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSKSVPLA------------- 259
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ +F +QHS+K V + G LD Q D QE ++ L N VE K +
Sbjct: 260 -LQRVFYELQHSDK-PVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDN-VENKMKGTC- 315
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++ I F G+ V +C ++R E +Y++ +++ K + ES +++ E L
Sbjct: 316 --VEGTIPKLFRGKMVSYIQCKHVDYRSERIEDYYDIQLSIKGKKNIFESFIDYVAVEQL 373
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+GD++Y G Q A + ++ LP VL+LQLMRF++D
Sbjct: 374 DGDNKYDAGEHG-LQEAEKGVKFLTLPPVLHLQLMRFMYD 412
>sp|P55824|FAF_DROME Probable ubiquitin carboxyl-terminal hydrolase FAF OS=Drosophila
melanogaster GN=faf PE=1 SV=2
Length = 2778
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 118/270 (43%), Gaps = 47/270 (17%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWN--PREDSEEKNNP 105
D+ P R F GLKN GATCY+NS+LQ + R +L + D E+ +
Sbjct: 1654 DYLPPVGARPTKGFCGLKNAGATCYMNSVLQQLYMVPAVRVGILRAHGAATTDGEDFSGD 1713
Query: 106 S------LGFSGFYEPQTAI--------------------------GHLQMLFALMQHSN 133
S LG + F P +A+ H+Q +FA + HS
Sbjct: 1714 SDLTGGGLGSALFSGPASALVSLPSSSSTIEDGLHDVRKNYHVVILKHVQAIFAHLGHSA 1773
Query: 134 KLLVDP----TDFVLTLG--LDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDY 187
P T F L LG ++ QQDA EF L + +E + P + N
Sbjct: 1774 LQYYVPRGLWTHFKL-LGEPVNLREQQDAVEFFMSLLESL-DEGLKALGQPQLMNAT--- 1828
Query: 188 FSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNR 245
G + C C + + E F V++ +L ES+ +++K ELLEG D Y C++
Sbjct: 1829 LGGSFSDQKICQECPHRYSKEEPFSVFSVDIRNHSSLTESLEQYVKGELLEGADAYHCDK 1888
Query: 246 CGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
C KK +R+ +K LP VL +QL RF +D
Sbjct: 1889 CDKKVVTVKRVCVKKLPPVLAIQLKRFEYD 1918
>sp|B1AY13|UBP24_MOUSE Ubiquitin carboxyl-terminal hydrolase 24 OS=Mus musculus GN=Usp24
PE=1 SV=1
Length = 2617
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 25/235 (10%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSL 107
D+ P + R + F+GL+N GATCY+N++ Q + +++L S + + +
Sbjct: 1672 DYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLL-------SVDDDTDNP 1724
Query: 108 GFSGFYEPQTAIGHLQMLFALMQHSNKLLVDPTDF--VLTLGLDRSY---QQDAQEFSKL 162
S FY+ Q+ GHL M+ + V P +F + + Y QQDA EF
Sbjct: 1725 DDSVFYQVQSLFGHL------MESKLQYYV-PENFWKIFKMWNKELYVREQQDAYEFFTS 1777
Query: 163 FLSNFVEEKFRVQSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CK 220
+ E ++ + K+ F G Y C C + +R E F L + V C+
Sbjct: 1778 LIDQMDEYLKKMGR----EQIFKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQ 1833
Query: 221 TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+L+ S+ +F++ E+LEG + Y+C +C +K+ +R +K LP VL + LMRF FD
Sbjct: 1834 SLEISLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFD 1888
>sp|Q9UPU5|UBP24_HUMAN Ubiquitin carboxyl-terminal hydrolase 24 OS=Homo sapiens GN=USP24
PE=1 SV=3
Length = 2620
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 117/235 (49%), Gaps = 25/235 (10%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSL 107
D+ P + R + F+GL+N GATCY+N++ Q + +++L S + + +
Sbjct: 1675 DYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLL-------SVDDDTDNP 1727
Query: 108 GFSGFYEPQTAIGHLQMLFALMQHSNKLLVDPTDF--VLTLGLDRSY---QQDAQEFSKL 162
S FY+ Q+ GHL M+ + V P +F + + Y QQDA EF
Sbjct: 1728 DDSVFYQVQSLFGHL------MESKLQYYV-PENFWKIFKMWNKELYVREQQDAYEFFTS 1780
Query: 163 FLSNFVEEKFRVQSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CK 220
+ ++E + I K+ F G Y C C + +R E F L + V C+
Sbjct: 1781 LIDQ-MDEYLKKMGRDQI---FKNTFQGIYSDQKICKDCPHRYEREEAFMALNLGVTSCQ 1836
Query: 221 TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+L+ S+ +F++ E+LEG + Y+C +C +K+ +R +K LP VL + LMRF FD
Sbjct: 1837 SLEISLDQFVRGEVLEGSNAYYCEKCKEKRITVKRTCIKSLPSVLVIHLMRFGFD 1891
>sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp5 PE=3 SV=3
Length = 1108
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GLKN GATCY+NSLLQ + FR+ V P + + K+ S+ ++
Sbjct: 212 YVGLKNQGATCYMNSLLQSLYIIHAFRRIVYQI-PTDSPQGKD--SIAYA---------- 258
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ F +Q N+ V T+ + G LD Q D QEF+++ N +E R
Sbjct: 259 -LQRCFYNLQFMNE-PVSTTELTKSFGWDSLDSFMQHDVQEFNRVLQDN-LERSMRDTK- 314
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++N + + F G+ C E+ RSE ++++ +NV K L++S R +++ E L
Sbjct: 315 --VENALTNLFVGKMKSYIACVNVNFESARSEDYWDIQLNVKGMKNLEDSFRSYIQVETL 372
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
EGD+ YF + G Q A + + + P +L+LQL RF +D
Sbjct: 373 EGDNCYFADTYG-FQEAKKGVIFESFPPILHLQLKRFEYD 411
>sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo sapiens
GN=USP9Y PE=1 SV=2
Length = 2555
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 119/265 (44%), Gaps = 41/265 (15%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLD-------------WN 94
++ P R P F+GLKN GATCY+NS++Q + R ++L +
Sbjct: 1545 EYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNSILAIEGTGSDLHDDMFGD 1604
Query: 95 PREDSEEKNNPS---LGFSGFYEPQTAIG--------------HLQMLFALMQHSNKLLV 137
++DSE +P G+ +E + A+ HLQ++F + S
Sbjct: 1605 EKQDSESNVDPRDDVFGYPHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASQLQYY 1664
Query: 138 DPTDFVLTLGL-----DRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGEY 192
P F L + Q DA EF L + ++E + P I + G +
Sbjct: 1665 VPRGFWKQFRLWGEPVNLREQHDALEFFN-SLVDSLDEALKALGHPAI---LSKVLGGSF 1720
Query: 193 VYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNRCGKKQ 250
C C + + E F L V++ + L +S+ +++K +LLEG + Y C +C KK
Sbjct: 1721 ADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYHCEKCDKKV 1780
Query: 251 NAGRRIRLKYLPKVLNLQLMRFVFD 275
+ +R+ +K LP+VL +QL RF +D
Sbjct: 1781 DTVKRLLIKKLPRVLAIQLKRFDYD 1805
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 107/220 (48%), Gaps = 24/220 (10%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
F+GLKN GATCY+NSLLQ +H FRKAV E+ + L
Sbjct: 198 FVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLA------------ 245
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ LF +Q+ N V + + G D Q D QE +++ L +E+K +
Sbjct: 246 -LQSLFYKLQY-NDTSVATKELTKSFGWDTYDSFMQHDVQELNRV-LCEKLEDKMKGTV- 301
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++ I+ F G ++ +C ++ R E FY+L ++V CK + S ++++ E L
Sbjct: 302 --VEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL 359
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
EGD++Y G Q+A + + P VL LQL RF +D
Sbjct: 360 EGDNKYHAEGHG-LQDAKKGVLFIDFPPVLQLQLKRFEYD 398
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 43/242 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + ++ +E L F +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLADLFHSIATQKKK 93
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 94 VG---------------VIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQE 138
Query: 170 EKFRVQSLPHIKN---------------FIKDYFSGEYVYVTKCFACGNETDRSEIFYEL 214
EK + + +KN ++ + F G T+C C + + E F +L
Sbjct: 139 EKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDL 198
Query: 215 VVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRF 272
V+V + ++ +R+F E L + +Y+C C KQ A +R+R+K LP +L L L RF
Sbjct: 199 SVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRF 258
Query: 273 VF 274
+
Sbjct: 259 KY 260
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 43/242 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + ++ +E L F +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLADLFHSIATQKKK 93
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 94 VG---------------VIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQE 138
Query: 170 EKFRVQSLPHIKN---------------FIKDYFSGEYVYVTKCFACGNETDRSEIFYEL 214
EK + + +KN ++ + F G T+C C + + E F +L
Sbjct: 139 EKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDL 198
Query: 215 VVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRF 272
V+V + ++ +R+F E L + +Y+C C KQ A +R+R+K LP +L L L RF
Sbjct: 199 SVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRF 258
Query: 273 VF 274
+
Sbjct: 259 KY 260
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 104/242 (42%), Gaps = 43/242 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + ++ +E L F +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLADLFHSIATQKKK 93
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 94 VG---------------VIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQE 138
Query: 170 EKFRVQSLPHIKN---------------FIKDYFSGEYVYVTKCFACGNETDRSEIFYEL 214
EK + + +KN ++ + F G T+C C + + E F +L
Sbjct: 139 EKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDL 198
Query: 215 VVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRF 272
V+V + ++ +R+F E L + +Y+C C KQ A +R+R+K LP +L L L RF
Sbjct: 199 SVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRF 258
Query: 273 VF 274
+
Sbjct: 259 KY 260
>sp|Q8BWR4|UBP40_MOUSE Ubiquitin carboxyl-terminal hydrolase 40 OS=Mus musculus GN=Usp40
PE=1 SV=2
Length = 1235
Score = 84.7 bits (208), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 21/229 (9%)
Query: 58 PNEFI---GLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPRE--DSEEKNNPSLGFSGF 112
P EF G++N G TCY++SLLQ FR+A+ P E E+K+ P
Sbjct: 34 PREFTNLSGIRNQGGTCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDAKV--- 90
Query: 113 YEPQTAIGHLQMLFA---LMQHSNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFVE 169
+ LQ LFA L+ +D TD + Q D QE +++ S
Sbjct: 91 ---RIIPLQLQRLFAQLLLLDQEAASTIDLTDSFGWTNDEEMRQHDVQELNRILFSAL-- 145
Query: 170 EKFRVQSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVV---NVCKTLDESM 226
E V + H + I + G V C C N ++R E F +L V NV DE
Sbjct: 146 ETSLVGTSGH--DLIHRLYHGTIVNQIVCKECKNISERQEDFLDLTVAVKNVSGLEDELC 203
Query: 227 REFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+++EE+ + D+ Y C C + A + +L+ LP L + L+RF FD
Sbjct: 204 NMYVEEEIFDYDNLYHCGTCDRLVKAAKSAKLRKLPPFLTISLLRFNFD 252
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 84.3 bits (207), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 106/220 (48%), Gaps = 24/220 (10%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
F+GLKN GATCY+NSLLQ +H FRKAV E+ + L
Sbjct: 197 FVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLA------------ 244
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ LF +Q+ N V + + G D Q D QE +++ L +E+K +
Sbjct: 245 -LQSLFYKLQY-NDTSVATKELTKSFGWDTYDSFMQHDVQELNRV-LCEKLEDKMKGTV- 300
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
++ I+ F G ++ +C ++ R E FY+L ++V CK + S ++++ E L
Sbjct: 301 --VEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERL 358
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
EGD++Y Q+A + + P VL LQL RF +D
Sbjct: 359 EGDNKYHA-EGHDLQDAKKGVLFIDFPPVLQLQLKRFEYD 397
>sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo sapiens
GN=USP9X PE=1 SV=3
Length = 2570
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 41/265 (15%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVL-------------DWN 94
++ P R P F+GLKN GATCY+NS++Q + R +L +
Sbjct: 1543 EYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGD 1602
Query: 95 PREDSEEKNNPS---LGFSGFYEPQTAIG--------------HLQMLFALMQHSNKLLV 137
++D+E +P G+ +E + A+ HLQ++F + S
Sbjct: 1603 EKQDNESNVDPRDDVFGYPQQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYY 1662
Query: 138 DPTDFVLTLGL-----DRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGEY 192
P F L + Q DA EF + + E +++L H + G +
Sbjct: 1663 VPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEA---LKALGH-PAMLSKVLGGSF 1718
Query: 193 VYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNRCGKKQ 250
C C + + E F L V++ + L +S+ +++K +LLEG + Y C +C KK
Sbjct: 1719 ADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKV 1778
Query: 251 NAGRRIRLKYLPKVLNLQLMRFVFD 275
+ +R+ +K LP VL +QL RF +D
Sbjct: 1779 DTVKRLLIKKLPPVLAIQLKRFDYD 1803
>sp|Q60MK8|UBP7_CAEBR Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis briggsae
GN=usp-7 PE=3 SV=1
Length = 1129
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 62 IGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIGH 121
IGL+N GATCY+NS+LQ ++ FR+AV + + E N +
Sbjct: 190 IGLRNQGATCYMNSILQSFYFTTGFRRAVYNMEVGTEPNESN--------------IVLA 235
Query: 122 LQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSLP 178
+Q +F +Q S++ V+ G LD Q D QEF ++ L N +E K + S
Sbjct: 236 MQRVFYELQMSSE-AVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDN-LETKMKGTSE- 292
Query: 179 HIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLE 236
+ I + F G KC E+ R+E FY++ +NV +L+ + + E L+
Sbjct: 293 --EKSIPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFDAYTTPETLD 350
Query: 237 GDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVF 274
D++Y G Q A + ++ LP VL++QLMRF +
Sbjct: 351 DDNKYDAGDHG-LQRAEKGVKFVELPPVLHVQLMRFQY 387
>sp|Q9NVE5|UBP40_HUMAN Ubiquitin carboxyl-terminal hydrolase 40 OS=Homo sapiens GN=USP40
PE=2 SV=3
Length = 1235
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 100/229 (43%), Gaps = 21/229 (9%)
Query: 58 PNEFI---GLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDS--EEKNNPSLGFSGF 112
P EF G++N G TCY+NSLLQ FR+A+ P E E+K+ P
Sbjct: 34 PREFTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKV--- 90
Query: 113 YEPQTAIGHLQMLFA---LMQHSNKLLVDPTDFVLTLGLDRSYQQDAQEFSKLFLSNFVE 169
+ LQ LFA L+ D TD + Q D QE +++ S
Sbjct: 91 ---RIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSAL-- 145
Query: 170 EKFRVQSLPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVV---NVCKTLDESM 226
E V + H + I + G V C C N ++R E F +L V NV D
Sbjct: 146 ETSLVGTSGH--DLIYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLEDALW 203
Query: 227 REFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
+++EE+ + D+ Y C C + A + +L+ LP L + L+RF FD
Sbjct: 204 NMYVEEEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFD 252
>sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1
SV=1
Length = 1230
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 108/220 (49%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++G +N GATCY+NSLLQ +F FRK V + P E N+ L
Sbjct: 204 YVGFRNQGATCYLNSLLQSYFFTKYFRKLVYEI-PTEHESPNNSVPLA------------ 250
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLGLDRS---YQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ F +Q S+ + +D + + G D + Q D QE +++ + + ++
Sbjct: 251 -LQRAFYQLQVSD-IPLDTLELTRSFGWDTAESFTQHDVQELNRILMDRL---ENNMKGT 305
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
P ++ + + F G+ KC E+ R E F++L +NV K L ES +++ EL+
Sbjct: 306 P-VEGKLNEIFVGKMKSYIKCINVDYESARVEDFWDLQLNVKNFKNLQESFDNYIEMELM 364
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
G++QY G Q+A + + + P VL+LQL RF +D
Sbjct: 365 NGENQYAAQDYG-LQDAQKGVIFESFPPVLHLQLKRFEYD 403
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 25/218 (11%)
Query: 62 IGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIGH 121
IGL+N GATCY+NS+LQ ++ FR+AV + + + E N +
Sbjct: 193 IGLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESN--------------IVLA 238
Query: 122 LQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSLP 178
+Q +F +Q +++ V+ G LD Q D QEF ++ L N +E K + S
Sbjct: 239 MQRVFYELQMASE-AVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDN-LETKMKGTSE- 295
Query: 179 HIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLE 236
+ I + F G KC E+ R+E FY++ +NV +L+ + + E+L+
Sbjct: 296 --EKSIPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLGMDSLERAFEAYTTSEILD 353
Query: 237 GDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVF 274
+++Y G Q A + ++ LP +L++QLMRF +
Sbjct: 354 DENKYDAGDHG-LQRAEKGVKFVELPPILHVQLMRFQY 390
>sp|P70398|USP9X_MOUSE Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Mus musculus
GN=Usp9x PE=1 SV=2
Length = 2559
Score = 81.6 bits (200), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 41/265 (15%)
Query: 48 DFDPDQELRDPNEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVL-------------DWN 94
++ P R P F+GLKN GATCY+NS++Q + R +L +
Sbjct: 1543 EYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNGILAIEGTGSDVDDDMSGD 1602
Query: 95 PREDSEEKNNPS---LGFSGFYEPQTAIG--------------HLQMLFALMQHSNKLLV 137
++D+E +P G+ +E + + HLQ++F + S
Sbjct: 1603 EKQDNESNVDPRDDVFGYPQQFEDKPPLSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYY 1662
Query: 138 DPTDFVLTLGL-----DRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIKNFIKDYFSGEY 192
P F L + Q DA EF + + E +++L H + G +
Sbjct: 1663 VPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEA---LKALGH-PAMLSKVLGGSF 1718
Query: 193 VYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELLEGDDQYFCNRCGKKQ 250
C C + + E F L V++ + L +S+ +++K +LLEG + Y C +C KK
Sbjct: 1719 ADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKV 1778
Query: 251 NAGRRIRLKYLPKVLNLQLMRFVFD 275
+ +R+ +K LP VL +QL RF +D
Sbjct: 1779 DTVKRLLIKKLPPVLAIQLKRFDYD 1803
>sp|Q9VYQ8|UBP7_DROME Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosophila melanogaster
GN=Usp7 PE=1 SV=1
Length = 1129
Score = 80.9 bits (198), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLGFSGFYEPQTAIG 120
++GLKN GATCY+NSLLQ + R +V D K S+G S
Sbjct: 240 YVGLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPTEADDSSK---SVGLS---------- 286
Query: 121 HLQMLFALMQHSNKLLVDPTDFVLTLG---LDRSYQQDAQEFSKLFLSNFVEEKFRVQSL 177
LQ +F +Q ++ V + G LD Q D QEF ++ L +E K + L
Sbjct: 287 -LQRVFHELQFGDR-PVGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDK-LESKMKGTIL 343
Query: 178 PHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVNV--CKTLDESMREFLKEELL 235
+ I F G+ KC + R E FY++ +N+ K + ES ++++ E L
Sbjct: 344 ---EGTIPGLFEGKMSSYIKCKNVDYNSTRYETFYDIQLNIKDKKNIYESFQDYVAPETL 400
Query: 236 EGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFVFD 275
EGD++Y G Q A + + P VL+L LMRF +D
Sbjct: 401 EGDNKYDAGVHG-LQEASKGVIFTSFPPVLHLHLMRFQYD 439
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 101/243 (41%), Gaps = 44/243 (18%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ +L + + +E L F +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKENLLTCLADLFHSIANQKRK 97
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFVE--EK 171
+G ++ P F+ L D QQDA EF L+ + ++
Sbjct: 98 VG---------------VIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQE 142
Query: 172 FRVQ------------------SLPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFYE 213
R Q S P ++ + F G T+C C + + E F +
Sbjct: 143 ERKQDKQNGKLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLD 202
Query: 214 LVVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMR 271
L V+V + ++ +R F E L + +Y+C C KQ A +R+R+K LP +L L L R
Sbjct: 203 LSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKR 262
Query: 272 FVF 274
F +
Sbjct: 263 FKY 265
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 47/246 (19%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + ++ +E L F +
Sbjct: 34 YFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKKKENLLTCLADLFHSIATQKKK 93
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 94 VG---------------VIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQE 138
Query: 170 EKFRVQSLPHIKN-------------------FIKDYFSGEYVYVTKCFACGNETDRSEI 210
E+ + + +KN ++ + F G T+C C + + E
Sbjct: 139 ERKQEKQNGRLKNNGTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCETVSSKDED 198
Query: 211 FYELVVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQ 268
F +L V+V + ++ +R+F E L + +Y+C C KQ A +R+R+K LP +L L
Sbjct: 199 FLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALH 258
Query: 269 LMRFVF 274
L RF +
Sbjct: 259 LKRFKY 264
>sp|A1CW53|CREB_NEOFI Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=creB PE=3 SV=2
Length = 761
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 99/315 (31%)
Query: 59 NEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDW------------------------- 93
++F G++N G TCY NS+LQ ++++PFR+AV+++
Sbjct: 52 DKFYGMENYGNTCYCNSILQCLYYSVPFREAVINYPTRTPIESLEAALAKSLRYPNPNAQ 111
Query: 94 ----------------------NPREDSEEKNNP------SLGFSGFYEPQ---TAIGHL 122
NP++ E+K++P +L E Q + G
Sbjct: 112 LEAEAQAEKQKAANAQRPGMPPNPQQKPEDKDSPEYKKKMALQTLPLLETQNNAASYGMS 171
Query: 123 QMLFALMQ---------HSNKLLVDPTDFVLTLGLDR-----SYQQDAQEFSKLFLSNFV 168
+ LF ++ S ++ P F+ L D + QDA EF L L+ V
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEVV 231
Query: 169 ---EEKFRVQSL------------------------PHIKNFIKDYFSGEYVYVTKCFAC 201
E + Q L P+ ++ + F G T+C C
Sbjct: 232 ANVEAEASKQPLMEKSLPAPETADSVDQSSSTGSKTPNTTRWVHELFEGLLTSETQCLTC 291
Query: 202 GNETDRSEIFYELVVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLK 259
+ R E+F +L V++ + ++ +R+F EE+L +++ C+ CG Q A +R+++K
Sbjct: 292 EKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIK 351
Query: 260 YLPKVLNLQLMRFVF 274
LP++L L L RF +
Sbjct: 352 RLPRILALHLKRFKY 366
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ +L + + +E L F +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRRKENLLTCLADLFHSIANQKRK 97
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 98 VG---------------VIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQE 142
Query: 170 EKFRVQS-----------------LPHIKNFIKDYFSGEYVYVTKCFACGNETDRSEIFY 212
E+ + ++ P ++ + F G T+C C + + E F
Sbjct: 143 ERKQDKTNGRLANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFL 202
Query: 213 ELVVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLM 270
+L V+V + ++ +R F E L + +Y+C C KQ A +R+R+K LP +L L L
Sbjct: 203 DLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLK 262
Query: 271 RFVF 274
RF +
Sbjct: 263 RFKY 266
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 43/242 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + + +E L F +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLADLFHSIATQKKK 97
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 98 VG---------------VIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQE 142
Query: 170 EKFRVQSLPHIKN---------------FIKDYFSGEYVYVTKCFACGNETDRSEIFYEL 214
E+ + + ++N ++ + F G T+C C + + E F +L
Sbjct: 143 ERKQEKQNGRLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDL 202
Query: 215 VVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRF 272
V+V + ++ +R F E L + +Y+C C KQ A +R+++K LP +L L L RF
Sbjct: 203 SVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRF 262
Query: 273 VF 274
+
Sbjct: 263 KY 264
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 101/241 (41%), Gaps = 42/241 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + + +E L F +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTCLADLFHSIATQKKK 97
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 98 VG---------------VIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQE 142
Query: 170 EKFRVQSLPHIKN--------------FIKDYFSGEYVYVTKCFACGNETDRSEIFYELV 215
E+ + + + N ++ + F G T+C C + + E F +L
Sbjct: 143 ERKQEKQNGRLPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLS 202
Query: 216 VNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRFV 273
V+V + ++ +R F E L + +Y+C C KQ A +R+++K LP +L L L RF
Sbjct: 203 VDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFK 262
Query: 274 F 274
+
Sbjct: 263 Y 263
>sp|B0Y4P5|CREB_ASPFC Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=creB PE=3 SV=1
Length = 767
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 127/315 (40%), Gaps = 99/315 (31%)
Query: 59 NEFIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDW------------------------- 93
++F G++N G TCY NS+LQ ++++PFR+AV+++
Sbjct: 46 DKFYGMENYGNTCYCNSILQCLYYSVPFREAVINYPTRTPIESLEAALAKSLRYPNPNAQ 105
Query: 94 ----------------------NPREDSEEKNNP------SLGFSGFYEPQ---TAIGHL 122
NP++ E+K++P +L E Q ++ G
Sbjct: 106 LEAEAQAEKQKAANAQRPGMPPNPQQKPEDKDSPEYKKKMALQTLPLLETQNNASSYGMS 165
Query: 123 QMLFALMQ---------HSNKLLVDPTDFVLTLGLDR-----SYQQDAQEFSKLFLSNFV 168
+ LF ++ S ++ P F+ L D + QDA EF L L+ V
Sbjct: 166 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEVV 225
Query: 169 ---------------------------EEKFRVQSLPHIKNFIKDYFSGEYVYVTKCFAC 201
+ P+ ++ + F G T+C C
Sbjct: 226 ANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNTTRWVHELFEGLLTSETQCLTC 285
Query: 202 GNETDRSEIFYELVVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLK 259
+ R E+F +L V++ + ++ +R+F EE+L +++ C+ CG Q A +R+++K
Sbjct: 286 EKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIK 345
Query: 260 YLPKVLNLQLMRFVF 274
LP++L L L RF +
Sbjct: 346 RLPRILALHLKRFKY 360
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 101/242 (41%), Gaps = 43/242 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDWNPREDSEEKNNPSLG--FSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + + +E L F +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKESLLTCLADLFHSIATQKKK 97
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----- 168
+G ++ P F+ L D QQDA EF L+
Sbjct: 98 VG---------------VIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQE 142
Query: 169 EEKFRVQS--LPHIK------------NFIKDYFSGEYVYVTKCFACGNETDRSEIFYEL 214
E K Q+ LP+ ++ + F G T+C C + + E F +L
Sbjct: 143 ERKQEKQNGRLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDL 202
Query: 215 VVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRF 272
V+V + ++ +R F E L + +Y+C C KQ A +R+++K LP +L L L RF
Sbjct: 203 SVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRF 262
Query: 273 VF 274
+
Sbjct: 263 KY 264
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 100/242 (41%), Gaps = 43/242 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDW--NPREDSEEKNNPSLGFSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + PR+ S F +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLSDLFHSIATQKKK 97
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 98 VG---------------VIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQE 142
Query: 170 EKFRVQSLPHI---------------KNFIKDYFSGEYVYVTKCFACGNETDRSEIFYEL 214
E+ + + I ++ + F G T+C C + + E F +L
Sbjct: 143 ERKQEKQNGRIPNGNIDNENNNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDL 202
Query: 215 VVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRF 272
V+V + ++ +R F E L + +Y+C C KQ A +R+++K LP +L L L RF
Sbjct: 203 SVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRF 262
Query: 273 VF 274
+
Sbjct: 263 KY 264
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 100/242 (41%), Gaps = 43/242 (17%)
Query: 61 FIGLKNLGATCYVNSLLQLWFHNLPFRKAVLDW--NPREDSEEKNNPSLGFSGFYEPQTA 118
+ GL N G TCY NS+LQ + PFR+ VL + PR+ S F +
Sbjct: 38 YFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTCLSDLFHSIATQKKK 97
Query: 119 IGHLQMLFALMQHSNKLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFV----E 169
+G ++ P F+ L D QQDA EF L+ E
Sbjct: 98 VG---------------VIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQE 142
Query: 170 EKFRVQSLPHI---------------KNFIKDYFSGEYVYVTKCFACGNETDRSEIFYEL 214
E+ + + I ++ + F G T+C C + + E F +L
Sbjct: 143 ERKQEKQNGRIPNGNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDL 202
Query: 215 VVNVCK--TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLMRF 272
V+V + ++ +R F E L + +Y+C C KQ A +R+++K LP +L L L RF
Sbjct: 203 SVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRF 262
Query: 273 VF 274
+
Sbjct: 263 KY 264
>sp|A6ZY34|UBP4_YEAS7 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DOA4 PE=3 SV=1
Length = 926
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 120/302 (39%), Gaps = 59/302 (19%)
Query: 18 SSRNCKGNPFCLA-SLGESRWFNEQKHDSSDDFDPDQELRDPNEFIGLKNLGATCYVNSL 76
SS P CL+ S +S + SS ++D D +GL+NLG +CY+N +
Sbjct: 524 SSATSTIQPSCLSLSNNDSLDHTDVTPTSSHNYDLDFA-------VGLENLGNSCYMNCI 576
Query: 77 LQLWFHNLPFRKAVLDWNPREDSEEKN---NPSLGFSGFYEPQTAIGHLQMLFALMQHSN 133
+Q + LD DS K+ N LG G A M + S
Sbjct: 577 IQCILGTHELTQIFLD-----DSYAKHININSKLGSKGILAKYFARLVHMMYKEQVDGSK 631
Query: 134 KLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIK------- 181
K+ + P F L G + QQD QEF + L E+ + S P +K
Sbjct: 632 KISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPPLKELSQEAE 691
Query: 182 ------------------------NFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVN 217
+ I D F G+Y KC C + + + F L +
Sbjct: 692 ARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTYQPFTVLSIP 751
Query: 218 VCK-------TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLM 270
+ K T+++ REF K E LE D+Q+ C C K+Q + +++ + LP+ L + L
Sbjct: 752 IPKKNSRNNITIEDCFREFTKCENLEVDEQWLCPHCKKRQPSTKQLTITRLPRNLIVHLK 811
Query: 271 RF 272
RF
Sbjct: 812 RF 813
>sp|P32571|UBP4_YEAST Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DOA4 PE=1 SV=2
Length = 926
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 120/302 (39%), Gaps = 59/302 (19%)
Query: 18 SSRNCKGNPFCLA-SLGESRWFNEQKHDSSDDFDPDQELRDPNEFIGLKNLGATCYVNSL 76
SS P CL+ S +S + SS ++D D +GL+NLG +CY+N +
Sbjct: 524 SSATSTIQPSCLSLSNNDSLDHTDVTPTSSHNYDLDFA-------VGLENLGNSCYMNCI 576
Query: 77 LQLWFHNLPFRKAVLDWNPREDSEEKN---NPSLGFSGFYEPQTAIGHLQMLFALMQHSN 133
+Q + LD DS K+ N LG G A M + S
Sbjct: 577 IQCILGTHELTQIFLD-----DSYAKHININSKLGSKGILAKYFARLVHMMYKEQVDGSK 631
Query: 134 KLLVDPTDFVLTLG-----LDRSYQQDAQEFSKLFLSNFVEEKFRVQSLPHIK------- 181
K+ + P F L G + QQD QEF + L E+ + S P +K
Sbjct: 632 KISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPPLKELSQEAE 691
Query: 182 ------------------------NFIKDYFSGEYVYVTKCFACGNETDRSEIFYELVVN 217
+ I D F G+Y KC C + + + F L +
Sbjct: 692 ARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTYQPFTVLSIP 751
Query: 218 VCK-------TLDESMREFLKEELLEGDDQYFCNRCGKKQNAGRRIRLKYLPKVLNLQLM 270
+ K T+++ REF K E LE D+Q+ C C K+Q + +++ + LP+ L + L
Sbjct: 752 IPKKNSRNNITIEDCFREFTKCENLEVDEQWLCPHCEKRQPSTKQLTITRLPRNLIVHLK 811
Query: 271 RF 272
RF
Sbjct: 812 RF 813
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 106,865,393
Number of Sequences: 539616
Number of extensions: 4629609
Number of successful extensions: 13509
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 12945
Number of HSP's gapped (non-prelim): 382
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)