BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2300
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25228|RAB3_DROME Ras-related protein Rab-3 OS=Drosophila melanogaster GN=Rab3 PE=1
SV=1
Length = 220
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/222 (87%), Positives = 205/222 (92%), Gaps = 3/222 (1%)
Query: 1 MAGVGETKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKV 60
MA G+ KWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKV
Sbjct: 1 MASGGDPKWQKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKV 60
Query: 61 KTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIK 120
KTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNE+SF S+QDW+TQIK
Sbjct: 61 KTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIK 120
Query: 121 TYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVD 180
TYSWDNAQVILVGNKCDMED+RVISFERG+ LA+ LGVEFFETSAK+NVNVK VFERLVD
Sbjct: 121 TYSWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVD 180
Query: 181 IICDKMSESLDSDPNLV-AGPKGTRLTEQPQRNNPINPNCNC 221
IICDKMSESLD+DP LV G KG RLT+QPQ P N NCNC
Sbjct: 181 IICDKMSESLDADPTLVGGGQKGQRLTDQPQ-GTP-NANCNC 220
>sp|Q96E17|RAB3C_HUMAN Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1
Length = 227
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 195/222 (87%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA + ++ QKD++DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK
Sbjct: 9 MASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 68
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTVF+++KR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 69 VKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 128
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCDMEDERVIS ERG+HL E LG EFFETSAKDN+NVK FERLV
Sbjct: 129 KTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLV 188
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
DIICDKMSESL++DP + A + TRL E P P PNC C
Sbjct: 189 DIICDKMSESLETDPAITAAKQNTRLKETPP---PPQPNCAC 227
>sp|P10949|RAB3C_BOVIN Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3
Length = 227
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 195/222 (87%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA + ++ QKD++DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK
Sbjct: 9 MASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 68
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTVF+++KR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 69 VKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 128
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCDMEDERVIS ERG+HL E LG EFFETSAKDN+NVK FERLV
Sbjct: 129 KTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLV 188
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
DIICDKMSESL++DP + A + TRL E P P PNC C
Sbjct: 189 DIICDKMSESLETDPAITAAKQNTRLKETPP---PPQPNCGC 227
>sp|P62824|RAB3C_RAT Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1
Length = 227
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 193/222 (86%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA + ++ QKD++DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK
Sbjct: 9 MASAQDARFGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 68
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTVF+++KR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 69 VKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 128
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVIL GNKCDMEDERV+S ERG+ L E LG EFFETSAKDN+NVK FERLV
Sbjct: 129 KTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLV 188
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
DIICDKMSESL++DP + A + TRL E P P PNC C
Sbjct: 189 DIICDKMSESLETDPAITAAKQSTRLKETPP---PPQPNCGC 227
>sp|P62823|RAB3C_MOUSE Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1
Length = 227
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/222 (78%), Positives = 193/222 (86%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA + ++ QKD++DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK
Sbjct: 9 MASAQDARFGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 68
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTVF+++KR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 69 VKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 128
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVIL GNKCDMEDERV+S ERG+ L E LG EFFETSAKDN+NVK FERLV
Sbjct: 129 KTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLV 188
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
DIICDKMSESL++DP + A + TRL E P P PNC C
Sbjct: 189 DIICDKMSESLETDPAITAAKQSTRLKETPP---PPQPNCGC 227
>sp|P63012|RAB3A_RAT Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1
Length = 220
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 194/223 (86%), Gaps = 5/223 (2%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA ++++ QK+++DQNFDYMFK+LIIGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKT++R+DKR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQV+LVGNKCDMEDERV+S ERG+ LA+ LG EFFE SAKDN+NVK FERLV
Sbjct: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
Query: 180 DIICDKMSESLD-SDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+IC+KMSESLD +DP + +G +LT+Q P + +C C
Sbjct: 181 DVICEKMSESLDTADPAVTGAKQGPQLTDQ---QAPPHQDCAC 220
>sp|Q06AU3|RAB3A_PIG Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1
Length = 220
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 194/223 (86%), Gaps = 5/223 (2%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA ++++ QK+++DQNFDYMFK+LIIGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKT++R+DKR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQV+LVGNKCDMEDERV+S ERG+ LA+ LG EFFE SAKDN+NVK FERLV
Sbjct: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
Query: 180 DIICDKMSESLD-SDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+IC+KMSESLD +DP + +G +LT+Q P + +C C
Sbjct: 181 DVICEKMSESLDTADPAVTGAKQGPQLTDQ---QAPPHQDCAC 220
>sp|P63011|RAB3A_MOUSE Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1
Length = 220
Score = 348 bits (894), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 194/223 (86%), Gaps = 5/223 (2%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA ++++ QK+++DQNFDYMFK+LIIGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKT++R+DKR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQV+LVGNKCDMEDERV+S ERG+ LA+ LG EFFE SAKDN+NVK FERLV
Sbjct: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
Query: 180 DIICDKMSESLD-SDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+IC+KMSESLD +DP + +G +LT+Q P + +C C
Sbjct: 181 DVICEKMSESLDTADPAVTGAKQGPQLTDQ---QAPPHQDCAC 220
>sp|P20337|RAB3B_HUMAN Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2
Length = 219
Score = 348 bits (893), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/222 (74%), Positives = 192/222 (86%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKWQ-KDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA V + K KDA+DQNFDYMFKLLIIGNSSVGKTSFLFRYADD+FT AFVSTVGIDFK
Sbjct: 1 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTV+RH+KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCDME+ERV+ E+G+ LAE LG +FFE SAK+N++V+ FERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV 180
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D ICDKMS+SLD+DP+++ K TRL++ P + NC+C
Sbjct: 181 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPL---LQQNCSC 219
>sp|P11023|RAB3A_BOVIN Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3
Length = 220
Score = 348 bits (893), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 193/223 (86%), Gaps = 5/223 (2%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA + ++ QK+++DQNFDYMFK+LIIGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASATDARYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKT++R+DKR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQV+LVGNKCDMEDERV+S ERG+ LA+ LG EFFE SAKDN+NVK FERLV
Sbjct: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
Query: 180 DIICDKMSESLD-SDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+IC+KMSESLD +DP + +G +LT+Q P + +C C
Sbjct: 181 DVICEKMSESLDTADPAVTGAKQGPQLTDQ---QAPPHQDCAC 220
>sp|Q5KTJ7|RAB3B_MESAU Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2
SV=1
Length = 219
Score = 348 bits (892), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/222 (74%), Positives = 192/222 (86%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKWQ-KDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA V + K KDA+DQNFDYMFKLLIIGNSSVGKTSFLFRYADD+FT AFVSTVGIDFK
Sbjct: 1 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTV+RH+KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCDME+ERV+ E+G+ LAE LG +FFE SAK+N++V+ FERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLV 180
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D ICDKMS+SLD+DP+++ K TRL++ P + NC+C
Sbjct: 181 DAICDKMSDSLDTDPSVLGASKTTRLSDTPPL---LQQNCSC 219
>sp|P10948|RAB3B_BOVIN Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1
Length = 219
Score = 347 bits (891), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 166/222 (74%), Positives = 192/222 (86%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKWQ-KDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA V + K KDA+DQNFDYMFKLLIIGNSSVGKTSFLFRYADD+FT AFVSTVGIDFK
Sbjct: 1 MASVTDGKAGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTV+RH+KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCDME+ERV+ E+G+ LAE LG +FFE SAK+N++V+ FERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLV 180
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D ICDKMS++LD+DP+L+ K TRL++ P + NC+C
Sbjct: 181 DAICDKMSDTLDTDPSLLGTSKNTRLSDTPPL---LQQNCSC 219
>sp|Q9CZT8|RAB3B_MOUSE Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1
Length = 219
Score = 347 bits (889), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 165/222 (74%), Positives = 192/222 (86%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKWQ-KDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA V + K KDA+DQNFDYMFKLLIIGNSSVGKTSFLFRYADD+FT AFVSTVGIDFK
Sbjct: 1 MASVTDGKTGIKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTV+RH+KRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCDME+ERV+ E+G+ LAE LG +FFE SAK+N++V+ FERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLV 180
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D ICDKMS+S+D+DP+++ K TRL++ P + NC+C
Sbjct: 181 DAICDKMSDSMDTDPSVLGASKTTRLSDTPPL---LQQNCSC 219
>sp|Q4R4R9|RAB3A_MACFA Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2
SV=1
Length = 220
Score = 346 bits (888), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 164/223 (73%), Positives = 194/223 (86%), Gaps = 5/223 (2%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA ++++ QK+++DQNFDYMFK+LIIGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKT++R+DKR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQV+LVGNKCDMEDERV+S ERG+ LA+ LG EFFE SAKDN+NVK FERLV
Sbjct: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
Query: 180 DIICDKMSESLD-SDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+IC+KMSESLD +DP + +G +L++Q P + +C C
Sbjct: 181 DVICEKMSESLDTADPAVTGAKQGPQLSDQ---QVPPHQDCAC 220
>sp|P20336|RAB3A_HUMAN Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1
Length = 220
Score = 346 bits (888), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 164/223 (73%), Positives = 194/223 (86%), Gaps = 5/223 (2%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA ++++ QK+++DQNFDYMFK+LIIGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKT++R+DKR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQI
Sbjct: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQV+LVGNKCDMEDERV+S ERG+ LA+ LG EFFE SAKDN+NVK FERLV
Sbjct: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
Query: 180 DIICDKMSESLD-SDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+IC+KMSESLD +DP + +G +L++Q P + +C C
Sbjct: 181 DVICEKMSESLDTADPAVTGAKQGPQLSDQ---QVPPHQDCAC 220
>sp|Q63941|RAB3B_RAT Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2
Length = 219
Score = 346 bits (888), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 161/211 (76%), Positives = 187/211 (88%), Gaps = 3/211 (1%)
Query: 11 KDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRV 70
+DA+DQNFDYMFKLLIIGNSSVGKTSFLFRYADD+FT AFVSTVGIDFKVKTV+RH+KRV
Sbjct: 12 RDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRV 71
Query: 71 KLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVI 130
KLQIWDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF ++QDW TQIKTYSWDNAQVI
Sbjct: 72 KLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVI 131
Query: 131 LVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESL 190
LVGNKCDME+ERVI E+G+ LAE LG +FFE SAK+N++V+ FERLVD ICDKMS+S+
Sbjct: 132 LVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSM 191
Query: 191 DSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+DP+++ K TRL++ P + NC+C
Sbjct: 192 DTDPSVLGASKTTRLSDTPPL---LQQNCSC 219
>sp|Q94986|RAB3_CAEEL Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2
SV=1
Length = 219
Score = 346 bits (887), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 164/207 (79%), Positives = 181/207 (87%), Gaps = 3/207 (1%)
Query: 15 DQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQI 74
DQNFDYMFKLLIIGNSSVGKTSFLFRY DDSFTSAFVSTVGIDFKVKTVFR DKRVKLQI
Sbjct: 16 DQNFDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQI 75
Query: 75 WDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGN 134
WDTAGQERYRTITTAYYRGAMGFILMYD+TNEESF S+QDW TQIKTYSW+NAQV+LVGN
Sbjct: 76 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGN 135
Query: 135 KCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDP 194
KCDM+ ERV+S +RG+ LA+ LG+EFFETSAK+N+NVK VFE+LV+IICDKM+ESLD DP
Sbjct: 136 KCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMAESLDKDP 195
Query: 195 NLVAGPKGTRLTEQPQRNNPINPNCNC 221
PKG +L P + P CNC
Sbjct: 196 Q--QQPKGQKLEANPTQ-KPAQQQCNC 219
>sp|P35276|RAB3D_MOUSE Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1
Length = 219
Score = 338 bits (868), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 163/222 (73%), Positives = 185/222 (83%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKWQ-KDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA E +DAADQNFDYMFKLL+IGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASASEPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTV+RHDKR+KLQIWDTAGQERYRTITTAYYRGAMGF+LMYD+ N+ESFT++QDW TQI
Sbjct: 61 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCD+EDERV+ E G+ LA+ LG EFFE SAK+N+NVK VFERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV 180
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
DIICDKM+ESL+ + + KG L + P P +C+C
Sbjct: 181 DIICDKMNESLEPSSSPGSNGKGPALGDTPP---PQPSSCSC 219
>sp|Q63942|RAB3D_RAT GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2
Length = 219
Score = 338 bits (867), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 161/211 (76%), Positives = 181/211 (85%), Gaps = 3/211 (1%)
Query: 11 KDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRV 70
+DAADQNFDYMFKLL+IGNSSVGKTSFLFRYADDSFT AFVSTVGIDFKVKTV+RHDKR+
Sbjct: 12 RDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRI 71
Query: 71 KLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVI 130
KLQIWDTAGQERYRTITTAYYRGAMGF+LMYD+ N+ESFT++QDW TQIKTYSWDNAQVI
Sbjct: 72 KLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVI 131
Query: 131 LVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESL 190
LVGNKCD+EDERV+S E G+ LA LG EFFE SAK+N+NVK VFERLVDIICDKM+ESL
Sbjct: 132 LVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 191
Query: 191 DSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
+ + + KG L + P P +C C
Sbjct: 192 EPSSSPGSNGKGPALGDTPP---PQPSSCGC 219
>sp|O95716|RAB3D_HUMAN Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1
Length = 219
Score = 330 bits (846), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/222 (72%), Positives = 187/222 (84%), Gaps = 4/222 (1%)
Query: 1 MAGVGETKW-QKDAADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 59
MA G+T+ +DAADQNFDYMFKLL+IGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 1 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 60 VKTVFRHDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQI 119
VKTV+RHDKR+KLQIWDTAGQERYRTITTAYYRGAMGF+LMYD+ N+ESF ++QDW TQI
Sbjct: 61 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI 120
Query: 120 KTYSWDNAQVILVGNKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLV 179
KTYSWDNAQVILVGNKCD+EDERV+ E G+ LA+ LG EFFE SAK+N+NVK VFERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV 180
Query: 180 DIICDKMSESLDSDPNLVAGPKGTRLTEQPQRNNPINPNCNC 221
D+IC+KM+ESL+ + + KG + + P P +C+C
Sbjct: 181 DVICEKMNESLEPSSSSGSNGKGPAVGDAPA---PQPSSCSC 219
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 139/180 (77%)
Query: 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77
+DY+ KLL+IG+S VGK+ L R+++DSFT +F++T+GIDFK++T+ KR+KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 78 AGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKCD 137
AGQER+RTITTAYYRGAMG +L+YDVT+E+SF +I++WI I+ ++ D+ +L+GNKCD
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCD 131
Query: 138 MEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPNLV 197
M +++V+ RGK LA+ G++F ETSAK+++NV+ F L I +M ++ + P +V
Sbjct: 132 MAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEQPQVV 191
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
CD+ D+R +S ERG+ LA G++F ETSAK N+NV+ F L I KM + L+ + P
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
G ++T + Q+
Sbjct: 183 Q--GSSHGVKITVEQQK 197
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
CD+ D+R +S ERG+ LA G++F ETSAK N+NV+ F L I KM + L+ + P
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
G ++T + Q+
Sbjct: 183 Q--GSSHGVKITVEQQK 197
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 211 bits (537), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
CD+ D+R +S ERG+ LA G++F ETSAK N+NV+ F L I KM + L+ + P
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+G ++T Q+
Sbjct: 183 Q--GSNQGVKITPDQQK 197
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
CD+ D+R +S ERG+ LA G++F ETSAK N+NV+ F L I KM + L+ + P
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+G ++T Q+
Sbjct: 183 Q--GSNQGVKITPDQQK 197
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
CD+ D+R +S ERG+ LA G++F ETSAK N+NV+ F L I KM + L+ + P
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+G ++T Q+
Sbjct: 183 Q--GSNQGVKITPDQQK 197
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
CD+ D+R +S ERG+ LA G++F ETSAK N+NV+ F L I KM + L+ + P
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+G ++T Q+
Sbjct: 183 Q--GSNQGVKITPDQQK 197
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 209 bits (533), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F + F+ST+GIDFK++T+ K++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESL-DSDP 194
CDM D+R +S ERG+ LA G++F ETSAK + NV+ F L I K++ + DS+
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+ GP ++TE +
Sbjct: 183 SGAGGP--VKITESRSK 197
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 209 bits (533), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F + F+ST+GIDFK++T+ K++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESL-DSDP 194
CDM D+R +S ERG+ LA G++F ETSAK + NV+ F L I K++ + DS+
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+ GP ++TE +
Sbjct: 183 SGAGGP--VKITESRSK 197
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F + F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++W+ I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
CD D+R +S E+G+ LA S G++F ETSAK N+N++ F L I KM + L+ + P
Sbjct: 123 CDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+G ++T Q+
Sbjct: 183 Q--GSNQGVKITPDQQK 197
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 209 bits (531), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 145/197 (73%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F + F+ST+GIDFK++T+ K++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESL-DSDP 194
CDM D+R +S ERG+ LA G++F ETSAK + NV+ F L I K++ + DS+
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNS 182
Query: 195 NLVAGPKGTRLTEQPQR 211
GP ++TE +
Sbjct: 183 AGAGGP--VKITENRSK 197
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 145/197 (73%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F + F+ST+GIDFK++T+ K++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESL-DSDP 194
CDM D+R +S ERG+ LA G++F ETSAK + NV+ F L I K++ + DS+
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNS 182
Query: 195 NLVAGPKGTRLTEQPQR 211
GP ++TE +
Sbjct: 183 AGAGGP--VKITENRSK 197
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 146/197 (74%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F + F+ST+GIDFK++T+ K++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESL-DSDP 194
CDM D+R +S ERG+ LA G++F E SAK ++NV+ F L I K++ + DS+
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNS 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+ GP ++TE +
Sbjct: 183 SGAGGP--VKITENRSK 197
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 140/193 (72%), Gaps = 5/193 (2%)
Query: 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77
+DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKCD 137
AGQER+RTIT++YYRGA G I++YDVT++ESF +++ W+ +I Y+ +N +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 138 MEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPNLV 197
+ + RV+S+E GK LA+ +G+ F ETSAKD NV+ F + I ++M+ S P
Sbjct: 125 LAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMA----SQPATN 180
Query: 198 AG-PKGTRLTEQP 209
A P ++ QP
Sbjct: 181 ASKPATVQMRGQP 193
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 206 bits (525), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 90/160 (56%), Positives = 130/160 (81%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+++DY+ KLL+IG+S VGK+ L R+++DSFT +F++T+GIDFK++T+ KR+KLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YDVT+++SF +++ W + ++ ++ +N IL+GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVF 175
CD ED+R +SFE+G+ LA+ LGV+F E SAK NVNV F
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAF 163
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 145/197 (73%), Gaps = 3/197 (1%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG +L+YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD-P 194
D+ D+R +S ERG+ LA G++F ETSAK N+NV+ F L I KM + L+ + P
Sbjct: 123 RDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
Query: 195 NLVAGPKGTRLTEQPQR 211
+G ++T Q+
Sbjct: 183 Q--GSNQGVKITPDQQK 197
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 138/178 (77%), Gaps = 1/178 (0%)
Query: 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77
+D++ KLL+IG+S VGK+ L R++D SFT +F++T+GIDFK++T+ KR+KLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 78 AGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKCD 137
AGQER+RTITTAYYRGAMG +L+YDVT+E+SF SI++WI I+ ++ D+ +L+GNKCD
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCD 131
Query: 138 MEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPN 195
M +++V+ RGK LA+ G++F ETSAK++VNV+ F L I +M ++ +DP+
Sbjct: 132 MTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDT-PNDPD 188
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 141/188 (75%), Gaps = 4/188 (2%)
Query: 17 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWD 76
++DY+ KLL+IG+S VGK+ L R++D SFT++F++T+GIDFK++T+ KR+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 77 TAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKC 136
TAGQER+RTITTAYYRGAMG +L+YDVT+E SF +I++WI I+ ++ DN ILVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 137 DM-EDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSES---LDS 192
DM E +R + +G+ LA+ G++FFETSAK N+NV+ VF + I ++++S ++
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEA 190
Query: 193 DPNLVAGP 200
P++ P
Sbjct: 191 QPSITIKP 198
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 204 bits (518), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 130/172 (75%)
Query: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 73
A + +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GIDFK+KTV H K++KLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVG 133
IWDTAGQER+ TITT+YYRGAMG +L+YD+TN +SF +I W+ I ++ ++ + +L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 134 NKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDK 185
NKCDMED+RV+ +G+ +A + FFETSAK N+N++ F L + I K
Sbjct: 122 NKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQK 173
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 203 bits (517), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 138/179 (77%)
Query: 16 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIW 75
+ +DY+FKLL+IG+S VGKT LFR+++D+F + F+ST+GIDFK++TV K++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIW 62
Query: 76 DTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNK 135
DTAGQER+RTITTAYYRGAMG + +YD+TNE+SF +I++WI I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 136 CDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDP 194
CDM ++R +S ERG+ LA G++F ETSAK ++NV+ F L I K+++ ++ +
Sbjct: 123 CDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENS 181
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 203 bits (516), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 142/204 (69%), Gaps = 8/204 (3%)
Query: 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77
+DY+FKLL+IG+S VGK+ L R+ADD++T +++ST+G+DFK++T+ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 78 AGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKCD 137
AGQER+RTIT++YYRGA G I++YDVT++ESF +++ W+ +I Y+ +N +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSD 124
Query: 138 MEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPNLV 197
+ +RV+S + K AESLG+EF ETSAK+ NV+ F + I +M+ + P V
Sbjct: 125 LTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANA----P--V 178
Query: 198 AGPKGTRLTEQPQRNNPINPNCNC 221
A G +LT P + P N C
Sbjct: 179 APKAGVKLT--PGQQVPSNGGSKC 200
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 143/197 (72%), Gaps = 3/197 (1%)
Query: 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77
+DY+FKLL+IG+SSVGK+ L R+ADD++ +++ST+G+DFK++T+ + K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDT 64
Query: 78 AGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKCD 137
AGQER+RTIT++YYRGA G I++YD T ESF +++ W+++I Y+ ++ +L+GNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKND 124
Query: 138 MEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPNLV 197
M + +V+S E G+ LA+ LG+ F ETSAKD++NV+ F + I KM ++ N
Sbjct: 125 MVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQ--TNANKT 182
Query: 198 AGPKGTRLTEQP-QRNN 213
+GP ++ QP Q+NN
Sbjct: 183 SGPGTVQMKGQPIQQNN 199
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 202 bits (513), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 142/195 (72%), Gaps = 6/195 (3%)
Query: 17 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWD 76
++DY+ KLL+IG+S VGK+ L R++D SFT++F++T+GIDFK++T+ KR+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 77 TAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKC 136
TAGQER+RTITTAYYRGAMG +L+YDVT+E SF +I++WI I+ ++ DN ILVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130
Query: 137 DM-EDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPN 195
DM E +R + +G+ LA+ G++FFETSAK N+NV+ VF + I ++ SD +
Sbjct: 131 DMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRL-----SDTD 185
Query: 196 LVAGPKGTRLTEQPQ 210
A P ++++ Q
Sbjct: 186 SRAEPATIKISQTDQ 200
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 129/172 (75%)
Query: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 73
A + +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GID K+KTV K++KLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVG 133
IWDTAGQER+ TITT+YYRGAMG +L+YD+TN +SF +I W+ I ++ ++ + +L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 134 NKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDK 185
NKCDMED+RV+ +G+ +A G+ FFETSAK N+N++ F L + I K
Sbjct: 122 NKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 142/195 (72%), Gaps = 6/195 (3%)
Query: 17 NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWD 76
++DY+ KLL+IG+S VGK+ L R++D SFT++F++T+GIDFK++T+ KR+KLQIWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 77 TAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKC 136
TAGQER+RTITTAYYRGAMG +L+YDVT+E SF +I++WI I+ ++ D+ ILVGNK
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKA 130
Query: 137 DM-EDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPN 195
DM E +R + +G+ LA+ G++FFETSAK N+NV+ VF + I ++ +D +
Sbjct: 131 DMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRL-----ADTD 185
Query: 196 LVAGPKGTRLTEQPQ 210
A P+ ++ + Q
Sbjct: 186 ARAEPQTIKINQSDQ 200
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 200 bits (509), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 144/194 (74%), Gaps = 4/194 (2%)
Query: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 73
+ + +D + KLL+IG+S VGK+ L R+ +D FT +F++T+GIDFK++T+ ++RVKLQ
Sbjct: 4 SQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQ 63
Query: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVG 133
+WDTAGQER+RTITTAYYRGAMG +L+YDVT+E+SF +I++W +++Y+ + ++ILVG
Sbjct: 64 VWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVG 123
Query: 134 NKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSD 193
NKCD++++RV+S E+G+ LA+ G+ F E S+K N+NV+ F + I D ++++ ++
Sbjct: 124 NKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKGNE 183
Query: 194 PNLVAGPKGTRLTE 207
+G G + E
Sbjct: 184 ----SGSGGINIAE 193
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 200 bits (508), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 130/172 (75%)
Query: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 73
A + +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GIDFK+KTV K++KLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVG 133
IWDTAGQER+ TITT+YYRGAMG +L+YD+TN +SF +I W+ I ++ ++ + +L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 134 NKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDK 185
NKCDM+D+RV+ +G+ +A G+ FFETSAK N+N++ F L + I K
Sbjct: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 200 bits (508), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 130/172 (75%)
Query: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 73
A + +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GIDFK+KTV K++KLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVG 133
IWDTAGQER+ TITT+YYRGAMG +L+YD+TN +SF +I W+ I ++ ++ + +L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 134 NKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDK 185
NKCDM+D+RV+ +G+ +A G+ FFETSAK N+N++ F L + I K
Sbjct: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 200 bits (508), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 130/172 (75%)
Query: 14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQ 73
A + +D +FKLL+IG+S VGKT LFR++DD+F + F+ST+GIDFK+KTV K++KLQ
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 74 IWDTAGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVG 133
IWDTAGQER+ TITT+YYRGAMG +L+YD+TN +SF +I W+ I ++ ++ + +L+G
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121
Query: 134 NKCDMEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDK 185
NKCDM+D+RV+ +G+ +A G+ FFETSAK N+N++ F L + I K
Sbjct: 122 NKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 199 bits (507), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 137/204 (67%), Gaps = 9/204 (4%)
Query: 18 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDT 77
+DY+FKLL+IG+S VGK+ L R+ADDS+ +++ST+G+DFK++TV + K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 78 AGQERYRTITTAYYRGAMGFILMYDVTNEESFTSIQDWITQIKTYSWDNAQVILVGNKCD 137
AGQER+RTIT++YYRGA G I+ YDVT+ ESF +++ W+ +I Y+ +N +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 138 MEDERVISFERGKHLAESLGVEFFETSAKDNVNVKGVFERLVDIICDKMSESLDSDPNLV 197
+ ++V+S E K A+ LG+ F ETSAK+ NV+ F + I +M+ S P
Sbjct: 125 LTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMA----SQPAGG 180
Query: 198 AGPKGTRLTEQPQRNNPINPNCNC 221
+ P ++ R P+N C
Sbjct: 181 SKPPTVQI-----RGQPVNQQSGC 199
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,893,938
Number of Sequences: 539616
Number of extensions: 3055824
Number of successful extensions: 10447
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 201
Number of HSP's that attempted gapping in prelim test: 8455
Number of HSP's gapped (non-prelim): 1218
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)