BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2305
(334 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VC51|WAP53_MOUSE Telomerase Cajal body protein 1 OS=Mus musculus GN=Wrap53 PE=2 SV=1
Length = 532
Score = 273 bits (698), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 198/305 (64%), Gaps = 21/305 (6%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYT-----LKIKEGGIIYDY 64
APDG+C+LTNS DN LR ++LP EL+ +++ +++Y L++ EG IYDY
Sbjct: 162 APDGSCILTNSADNVLRIYNLPPELY--------SEQEQVDYAEMVPVLRMVEGDTIYDY 213
Query: 65 VWYPKTSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDG 124
WY SS TSY SS PIH+WD+ GE++A++R YN +DE+T A+SL FS DG
Sbjct: 214 CWYSLMSSTQPDTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDG 273
Query: 125 NKIYAGFLSEVKIFSTDRPGRECVSRN--LKPWFRKNIVSAIAINPVHPDICALGTYSKI 182
++++ GF V++FST RPGR+C R K + I+S IA +P P + A G+Y +
Sbjct: 274 SQLFCGFNRTVRVFSTSRPGRDCEVRATFAKKQGQSGIISCIAFSPSQP-LYACGSYGRT 332
Query: 183 IGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFP 242
IGL++ DG PL L GH GGITHL F +G L FSGARKD E++CWDLR PG +L +
Sbjct: 333 IGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLS 392
Query: 243 RQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQD 302
R+V+TNQR+YFDL +L+SGNT+G +S+W+++ + ++S EP+ F +D
Sbjct: 393 REVTTNQRIYFDLDPSGQFLVSGNTSGVVSVWDIS-----GALSDDSKLEPVVTFLPQKD 447
Query: 303 CTNGV 307
CTNGV
Sbjct: 448 CTNGV 452
>sp|Q5XII5|WAP53_RAT Telomerase Cajal body protein 1 OS=Rattus norvegicus GN=Wrap53 PE=2
SV=1
Length = 532
Score = 271 bits (694), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/301 (46%), Positives = 193/301 (64%), Gaps = 13/301 (4%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGIIYDYVWYPK 69
APDG+C+LTNS DN LR ++LP EL+ +S ++ L++ EG IYDY WY
Sbjct: 162 APDGSCILTNSADNVLRIYNLPPELYSESE---QVDYAEMVPVLRMVEGDTIYDYCWYSL 218
Query: 70 TSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYA 129
SS TSY SS PIH+WD+ GE++A++R YN +DE+T A+SL FS DG++++
Sbjct: 219 MSSTQPDTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFC 278
Query: 130 GFLSEVKIFSTDRPGRECVSRN--LKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFS 187
GF V++FST RPGR+C R K + I+S +A +P P + A G+Y + +GL++
Sbjct: 279 GFNRTVRVFSTSRPGRDCEVRTTFAKKQGQSGIISCLAFSPAQP-LYACGSYGRTLGLYA 337
Query: 188 DSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVST 247
DG PL L GH GGITHL F +G L FSGARKD E++CWDLR PG +L + R+V+T
Sbjct: 338 WDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLSREVTT 397
Query: 248 NQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQ-EPLYKFSAHQDCTNG 306
NQR+YFDL +L+SGNT+G +S+W++ S + + Q EP+ F DCTNG
Sbjct: 398 NQRIYFDLDPSGQFLVSGNTSGVVSVWDI------SGAFSDCKQLEPVMTFLPQDDCTNG 451
Query: 307 V 307
V
Sbjct: 452 V 452
>sp|Q3SWZ7|WAP53_BOVIN Telomerase Cajal body protein 1 OS=Bos taurus GN=WRAP53 PE=2 SV=1
Length = 540
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/305 (45%), Positives = 191/305 (62%), Gaps = 22/305 (7%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYT-----LKIKEGGIIYDY 64
APDG+C+LTNS DN LR ++LP EL+ N+ +L Y L++ EG IYDY
Sbjct: 169 APDGSCILTNSADNILRIYNLPPELY--------NEGEQLEYAEMAPVLRMVEGDTIYDY 220
Query: 65 VWYPKTSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDG 124
WY SS TSY SS PIH+WD+ GE++A++R YN +DE+T A+SL FS DG
Sbjct: 221 CWYSLMSSAQPDTSYVASSSRENPIHIWDAFTGELRASFRSYNHLDELTAAHSLCFSPDG 280
Query: 125 NKIYAGFLSEVKIFSTDRPGRECVSRN--LKPWFRKNIVSAIAINPVHPDICALGTYSKI 182
++++ GF V++FST RPGR+C R K + I+S IA +P P + A G+Y +
Sbjct: 281 SQLFCGFNRTVRVFSTSRPGRDCEVRTTFAKRQGQSGIISCIAFSPTQP-LYACGSYGRS 339
Query: 183 IGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFP 242
+GL++ DG PL L GH GGITHL F +G FSGARKD E++CWDLR G L +
Sbjct: 340 LGLYTWEDGSPLALLGGHQGGITHLCFHPDGNCFFSGARKDAELLCWDLRQLGHPLWSLS 399
Query: 243 RQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQD 302
R+V+TNQR+YFDL +L+SG+T+G +S+W+ + L S P EP+ F +D
Sbjct: 400 REVTTNQRIYFDLDPTGQFLVSGSTSGAVSVWDTGGAGLESKP------EPVLSFQPQKD 453
Query: 303 CTNGV 307
CTNGV
Sbjct: 454 CTNGV 458
>sp|Q60525|WAP53_MESAU Telomerase Cajal body protein 1 OS=Mesocricetus auratus GN=Wrap53
PE=2 SV=1
Length = 538
Score = 268 bits (686), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/300 (46%), Positives = 192/300 (64%), Gaps = 11/300 (3%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGIIYDYVWYPK 69
APDG+C+LTNS DN LR ++LP EL+ + ++ L++ EG IYDY WY
Sbjct: 166 APDGSCILTNSADNTLRIYNLPPELYSATE---QVDYAEMVPVLRMVEGDTIYDYCWYSL 222
Query: 70 TSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYA 129
SS TSY SS PIH+WD+ GE++A++R YN +DE+T A+SL FS DG++++
Sbjct: 223 MSSSQPDTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFC 282
Query: 130 GFLSEVKIFSTDRPGRECVSRN--LKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFS 187
GF V++FST RPGR+C R K + I+S IA +P P + A G+Y + +GL++
Sbjct: 283 GFNRTVRVFSTSRPGRDCEVRATFAKKQGQSGIISCIAFSPSQP-LYACGSYGRTLGLYA 341
Query: 188 DSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVST 247
DG PL L GH GGITHL F +G L FSGARKD E++CWDLR PG +L + R+V+T
Sbjct: 342 WDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLSREVTT 401
Query: 248 NQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCTNGV 307
NQR+YFDL +L+SGNTNG +S+W+++ + SS P+ F +DCTNGV
Sbjct: 402 NQRIYFDLDPSGQFLVSGNTNGMVSVWDISGAFGDSSKL-----GPVMTFLPQKDCTNGV 456
>sp|Q9BUR4|WAP53_HUMAN Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1
Length = 548
Score = 263 bits (671), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/300 (45%), Positives = 189/300 (63%), Gaps = 12/300 (4%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGIIYDYVWYPK 69
APDG+C+LTNS DN LR ++LP EL+ + + ++ L++ EG IYDY WY
Sbjct: 178 APDGSCILTNSADNILRIYNLPPELYHEGE---QVEYAEMVPVLRMVEGDTIYDYCWYSL 234
Query: 70 TSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYA 129
SS TSY SS PIH+WD+ GE++A++R YN +DE+T A+SL FS DG++++
Sbjct: 235 MSSAQPDTSYVASSSRENPIHIWDAFTGELRASFRAYNHLDELTAAHSLCFSPDGSQLFC 294
Query: 130 GFLSEVKIFSTDRPGRECVSRN--LKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFS 187
GF V++FST RPGR+C R K + I+S IA +P P + A G+Y + +GL++
Sbjct: 295 GFNRTVRVFSTARPGRDCEVRATFAKKQGQSGIISCIAFSPAQP-LYACGSYGRSLGLYA 353
Query: 188 DSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVST 247
DG PL L GH GGITHL F +G FSGARKD E++CWDLR G L + R+V+T
Sbjct: 354 WDDGSPLALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGREVTT 413
Query: 248 NQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCTNGV 307
NQR+YFDL +L+SG+T+G +S+W+ + P + EP+ F +DCTNGV
Sbjct: 414 NQRIYFDLDPTGQFLVSGSTSGAVSVWDTD------GPGNDGKPEPVLSFLPQKDCTNGV 467
>sp|O59762|GNR1_SCHPO Guanine nucleotide-binding protein negative regulator 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gnr1 PE=1 SV=1
Length = 399
Score = 103 bits (258), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 133/276 (48%), Gaps = 14/276 (5%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGIIYDYVWYPK 69
+PDG+ +L+ + D L +++P K P N L+Y + E +Y Y WY +
Sbjct: 55 SPDGSTILSLTEDQCLNCWNVPFSDLSKKADGPLNFSKHLSYKYQSPE--TVYSYSWYSR 112
Query: 70 TSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYA 129
D ++ F SS PI L + G+ KA+Y + + ++ L F+ DG + A
Sbjct: 113 MKLDDPSSNLFAVSSRDQPIKLINFTTGKNKASYHMIDHQERYQGSHCLQFTNDGEYLIA 172
Query: 130 GFLSEVKIFSTDRPGRECVSRNLKPWFR--------KNIVSAIAINPVHPDICALGTYSK 181
G + + F+ +E V + ++ K I S ++NP+ A+GTYS
Sbjct: 173 GDKNCLHHFNIRTGCKEPVMTTVTHGYKVPLWEFSLKGIQSCFSLNPMDSKTLAVGTYSN 232
Query: 182 IIGLFSDSDGRP--LFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILH 239
+G+++D RP L F G+THL++ +G L+ G+R +I WD+R +++
Sbjct: 233 RVGIYNDCGRRPCQLEFSIERGNGVTHLQWCEDGEKLYVGSRCSDKIEVWDIRYVRDMVY 292
Query: 240 TFP-RQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIW 274
+ TNQR+ FD T + +L+G T+G + W
Sbjct: 293 ALEGHRGDTNQRILFD-TDKKDEILAGGTDGSIRRW 327
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 38/285 (13%)
Query: 11 PDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGIIYDYVWYPKT 70
PDG+ L + S+D +R +D+ S + +N + +
Sbjct: 1252 PDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAF------------------- 1292
Query: 71 SSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAG 130
+ DG S S + LW+ + T++ + + S+ FS DG + +G
Sbjct: 1293 -NPDG--SMLASGSGDQTVRLWEISSSKCLHTFQGHT-----SWVSSVTFSPDGTMLASG 1344
Query: 131 FLSE-VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFSDS 189
+ V+++S EC+ L N V ++ +P I A G+ + + L+S S
Sbjct: 1345 SDDQTVRLWSISSG--ECLYTFLG---HTNWVGSVIFSP-DGAILASGSGDQTVRLWSIS 1398
Query: 190 DGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQ 249
G+ L+ L+GHN + + FS +G LL SG+ D + W++ + C L+T +++ +
Sbjct: 1399 SGKCLYTLQGHNNWVGSIVFSPDGTLLASGS-DDQTVRLWNISSGEC-LYTLHGHINSVR 1456
Query: 250 RVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPL 294
V F +S L SG+ + + +W+V T + E + E +
Sbjct: 1457 SVAF--SSDGLILASGSDDETIKLWDVKTGECIKTLKSEKIYEGM 1499
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 159 NIVSAIAINPVHPD--ICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILL 216
I+ ++ PD + A G I+ + + G+ L KGHN + + FS +G +L
Sbjct: 862 KILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKML 921
Query: 217 FSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNV 276
SG+ D + WD+ + C L TF S + V F S L SG+++ + +W++
Sbjct: 922 ASGS-DDQTVRLWDISSGQC-LKTFKGHTSRVRSVVFSPNSL--MLASGSSDQTVRLWDI 977
Query: 277 NTSNLPSSPYEESVQEPLYKFSAH 300
++ E LY F H
Sbjct: 978 SSG------------ECLYIFQGH 989
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 120/300 (40%), Gaps = 52/300 (17%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGIIYDYVWYPK 69
+P+G L S+D +R +D+ S+ K YTL+ W
Sbjct: 1125 SPNGVTLANGSSDQIVRLWDISSK--------------KCLYTLQGHTN-------WVNA 1163
Query: 70 TS-SIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIY 128
+ S DG T S + LWD I ++ Y + S+ F+ DG+ +
Sbjct: 1164 VAFSPDGAT--LASGSGDQTVRLWD-----ISSSKCLYILQGHTSWVNSVVFNPDGSTLA 1216
Query: 129 AGFLSE-VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFS 187
+G + V+++ + C + W V+++ NP + A G+ K + L+
Sbjct: 1217 SGSSDQTVRLWEINSSKCLCTFQGHTSW-----VNSVVFNP-DGSMLASGSSDKTVRLWD 1270
Query: 188 DSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVST 247
S + L +GH + + F+ +G +L SG+ D + W++ + C LHTF S
Sbjct: 1271 ISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGS-GDQTVRLWEISSSKC-LHTFQGHTSW 1328
Query: 248 NQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCTNGV 307
V F + L SG+ + + +W++++ E LY F H + V
Sbjct: 1329 VSSVTF--SPDGTMLASGSDDQTVRLWSISSG------------ECLYTFLGHTNWVGSV 1374
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 89 IHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSEVKIFSTDRPGREC- 147
+ LWD G+ T++ + + S+ FS + + +G S+ + D EC
Sbjct: 930 VRLWDISSGQCLKTFKGHT-----SRVRSVVFSPNSLMLASGS-SDQTVRLWDISSGECL 983
Query: 148 -VSRNLKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITH 206
+ + W V ++A N + + A G+ + + L+ S + + +GH +
Sbjct: 984 YIFQGHTGW-----VYSVAFN-LDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRS 1037
Query: 207 LEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGN 266
+ FSS+G +L SG+ D + WD+ + C L+T S + V F + L SG
Sbjct: 1038 VVFSSDGAMLASGS-DDQTVRLWDISSGNC-LYTLQGHTSCVRSVVF--SPDGAMLASGG 1093
Query: 267 TNGDLSIWNVNTSN 280
+ + +W++++ N
Sbjct: 1094 DDQIVRLWDISSGN 1107
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 120/310 (38%), Gaps = 72/310 (23%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGIIYDYVWYPK 69
+ DG L + S+D +R +D+ S C ++ R + V+ P
Sbjct: 915 SQDGKMLASGSDDQTVRLWDISSG-QCLKTFKGHTSR--------------VRSVVFSPN 959
Query: 70 TSSIDGFTSYFLCS-SMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNK-- 126
S L S S + LWD GE ++ + YS+AF+LDG+
Sbjct: 960 --------SLMLASGSSDQTVRLWDISSGECLYIFQGHT-----GWVYSVAFNLDGSMLA 1006
Query: 127 --------------------IYAGFLSEVK--IFSTDRPGRECVS--RNLKPW------- 155
I+ G S V+ +FS+D S + ++ W
Sbjct: 1007 TGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNC 1066
Query: 156 -----FRKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFS 210
+ V ++ +P + A G +I+ L+ S G L+ L+G+ + L FS
Sbjct: 1067 LYTLQGHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFS 1125
Query: 211 SNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGD 270
NG+ L +G+ D + WD+ + C+ + Q TN + L SG+ +
Sbjct: 1126 PNGVTLANGS-SDQIVRLWDISSKKCL---YTLQGHTNWVNAVAFSPDGATLASGSGDQT 1181
Query: 271 LSIWNVNTSN 280
+ +W++++S
Sbjct: 1182 VRLWDISSSK 1191
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 39 VWRPSNQRPKLNYTLKIKEGGIIYDYVWYPKTSSIDGFTSYFLCSSMYAPIHLWD-SVGG 97
VW+ S+++ +L +TL+ + G++ + +I + SS+ A I LWD G
Sbjct: 46 VWKWSDEKLELQWTLEGHQLGVV--------SVNISQNGAIAASSSLDAHIRLWDLETGK 97
Query: 98 EIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAG-FLSEVKIFSTDRPGRECVSRNLKPWF 156
+IK+ VD A+++AFS D I G L +V IF + +E +L
Sbjct: 98 QIKS--MDAGPVD----AWTVAFSPDSKYIATGSHLGKVNIFGVESGKKE---HSLDT-- 146
Query: 157 RKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILL 216
R + +IA +P A G II +F + G+ L L+GH I L FS + LL
Sbjct: 147 RGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL 205
Query: 217 FSGARKDCEIICWDLRNP 234
+ A D I +D+++
Sbjct: 206 VT-ASDDGYIKIYDVQHA 222
>sp|P49846|TAF5_DROME Transcription initiation factor TFIID subunit 5 OS=Drosophila
melanogaster GN=Taf5 PE=1 SV=1
Length = 704
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 170 HPD--ICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEII 227
HP+ A G+ + + L+ + G+ + + GH G ++ L FS+ G L SG+ D II
Sbjct: 543 HPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGS-VDHNII 601
Query: 228 CWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
WDL N G ++ T R ST + F + L + + +L++W+
Sbjct: 602 IWDLSN-GSLVTTLLRHTSTVTTITF--SRDGTVLAAAGLDNNLTLWD 646
>sp|Q99973|TEP1_HUMAN Telomerase protein component 1 OS=Homo sapiens GN=TEP1 PE=1 SV=2
Length = 2627
Score = 47.8 bits (112), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 25/117 (21%)
Query: 197 LKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPG--CILHTFPRQVSTNQRVYFD 254
L+GH G ++ FS++G L +G R D ++CWD+R P ++H+FP R +
Sbjct: 2057 LRGHEGPVSCCSFSTDGGSLATGGR-DRSLLCWDVRTPKTPVLIHSFP----ACHRDW-- 2109
Query: 255 LTSCS----NYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCTNGV 307
+T C+ N L+S +++G + +W+ ES Q L +F HQ + V
Sbjct: 2110 VTGCAWTKDNLLISCSSDGSVGLWD-----------PESGQR-LGQFLGHQSAVSAV 2154
>sp|Q6GMD2|WDR61_XENLA WD repeat-containing protein 61 OS=Xenopus laevis GN=wdr61 PE=2
SV=1
Length = 305
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 23/198 (11%)
Query: 39 VWRPSNQRPKLNYTLKIKEGGIIYDYVWYPKTSSIDGFTSYFLCSSMYAPIHLWD-SVGG 97
VW+ S++R ++ + L+ + G++ + + + SS+ A I LWD G
Sbjct: 46 VWKWSDERLEMQWALEGHQLGVV--------SVDVSPSGNIMASSSLDAHIRLWDLESGK 97
Query: 98 EIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAG-FLSEVKIFSTDRPGRECVSRNLKPWF 156
+I++ VD A+S+AFS D + G + +V IF + +E
Sbjct: 98 QIRSI--DAGPVD----AWSVAFSPDSQHLATGSHVGKVNIFGVETGKKEYSLDT----- 146
Query: 157 RKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILL 216
R + +IA +P A G II +F + G+ L L+GH I L FS++ LL
Sbjct: 147 RGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSTDSQLL 205
Query: 217 FSGARKDCEIICWDLRNP 234
+ A D I +D+++
Sbjct: 206 VT-ASDDGYIKIYDVQHA 222
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 183 IGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFP 242
I ++S SD + GH G +T + F+ G +L SG+ KD E+I WD+ + F
Sbjct: 83 IRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGS-KDTEVIVWDIITESGL---FR 138
Query: 243 RQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSN 280
+ +Q L SN+L++ + +G + IW+ T +
Sbjct: 139 LRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQH 176
>sp|Q91WM3|U3IP2_MOUSE U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus
GN=Rrp9 PE=1 SV=1
Length = 475
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 23/126 (18%)
Query: 194 LFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQR--- 250
+ L+GH IT L + + + +FS A KDC II W + G LH PR Q
Sbjct: 139 IRVLRGHQLSITCLVITPDDLAIFSAA-KDCTIIKWSVET-GRKLHVIPRAKKGAQGQPA 196
Query: 251 ------VYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCT 304
+ ++S YL SG+ + + IW + + LY F+ H+D
Sbjct: 197 GHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSC------------QHLYTFTGHRDAV 244
Query: 305 NGVRWK 310
+G+ ++
Sbjct: 245 SGLAFR 250
>sp|Q8WQ85|VILD_DICDI Villidin OS=Dictyostelium discoideum GN=vilA PE=1 SV=2
Length = 1704
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 18/123 (14%)
Query: 195 FFLKGHNGGITHLEFSS-NGILLFSGARKDCEIICWDLRNPGCI-------LHTFPRQVS 246
F +KGH I+ EFS+ N ++ +G+R DC I W++ G I L T P+Q
Sbjct: 78 FCIKGHTDPISCFEFSNFNDYVIATGSR-DCTIKIWEVPEEGLIKDNLVTPLITLPKQQK 136
Query: 247 TNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCTNG 306
VYF S + +S + L IW+++++ SS + K + H+D
Sbjct: 137 RVTGVYFH-PSVDSLFMSSTLDYTLDIWDLSSTGEQSS--------VIQKLTGHEDLIMS 187
Query: 307 VRW 309
V W
Sbjct: 188 VGW 190
>sp|P07834|CDC4_YEAST Cell division control protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CDC4 PE=1 SV=2
Length = 779
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 156 FRKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGIL 215
R ++ S I + G K+I ++ + + L L GH+GG+ L+++ GIL
Sbjct: 377 LRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGIL 436
Query: 216 LFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSN--YLLSGNTNGDLSI 273
+ SG+ D + WD++ GC H F ST + D+ N Y+++G+ + L +
Sbjct: 437 V-SGS-TDRTVRVWDIKK-GCCTHVFKGHNSTVR--CLDIVEYKNIKYIVTGSRDNTLHV 491
Query: 274 WNV 276
W +
Sbjct: 492 WKL 494
>sp|B3MEY6|LIS1_DROAN Lissencephaly-1 homolog OS=Drosophila ananassae GN=Lis-1 PE=3 SV=1
Length = 411
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G LF L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLFTLNGHDNWVRGLAFHPAGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 57/239 (23%)
Query: 10 APDGTCLLTNSNDNHLRTFDLPS-------ELHCKSVWR----PSNQRPKLNYTLKIKEG 58
+PDG + + S+D+ ++ +D S E H SVW P QR
Sbjct: 1060 SPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA---------- 1109
Query: 59 GIIYDYVWYPKTSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSL 118
+ SIDG I +WD+ G T + +S+
Sbjct: 1110 -----------SGSIDG------------TIKIWDAASGTCTQTLEGHG-----GWVHSV 1141
Query: 119 AFSLDGNKIYAGFL-SEVKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPDICALG 177
AFS DG ++ +G + +KI+ D C ++ L+ V ++A +P + A G
Sbjct: 1142 AFSPDGQRVASGSIDGTIKIW--DAASGTC-TQTLEG--HGGWVQSVAFSPDGQRV-ASG 1195
Query: 178 TYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGC 236
+ K I ++ + G L+GH G + + FS +G + SG+ D I WD + C
Sbjct: 1196 SSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGS-SDNTIKIWDTASGTC 1253
Score = 39.3 bits (90), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 16/189 (8%)
Query: 89 IHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSE-VKIFSTDRPGREC 147
I +WD+ G T + S+AFS DG ++ +G +KI+ D C
Sbjct: 907 IKIWDAASGTCTQTLEGHG-----GRVQSVAFSPDGQRVASGSDDHTIKIW--DAASGTC 959
Query: 148 VSRNLKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHL 207
++ L+ + V ++A +P + A G+ K I ++ + G L+GH G + +
Sbjct: 960 -TQTLEG--HGSSVLSVAFSPDGQRV-ASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSV 1015
Query: 208 EFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNT 267
FS +G + SG+ D I WD + C T Q V F + + SG+
Sbjct: 1016 AFSPDGQRVASGS-DDKTIKIWDTASGTCT-QTLEGHGGWVQSVVF--SPDGQRVASGSD 1071
Query: 268 NGDLSIWNV 276
+ + IW+
Sbjct: 1072 DHTIKIWDA 1080
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 120/302 (39%), Gaps = 50/302 (16%)
Query: 5 EDVDEAPDGTCLLTNSNDNHLRTFDLPS-------ELHCKSV----WRPSNQRPKL---N 50
+ V +PDG + + S+D+ ++ +D S E H SV + P QR +
Sbjct: 929 QSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGD 988
Query: 51 YTLKIKE-------------GGIIYDYVWYPKTSSIDGFTSYFLCSSMYAPIHLWDSVGG 97
T+KI + GG ++ + P + S I +WD+ G
Sbjct: 989 KTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRV-------ASGSDDKTIKIWDTASG 1041
Query: 98 EIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSE-VKIFSTDRPGRECVSRNLKPWF 156
T + S+ FS DG ++ +G +KI+ D C ++ L+
Sbjct: 1042 TCTQTLEGHG-----GWVQSVVFSPDGQRVASGSDDHTIKIW--DAVSGTC-TQTLEG-- 1091
Query: 157 RKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILL 216
+ V ++A +P + A G+ I ++ + G L+GH G + + FS +G +
Sbjct: 1092 HGDSVWSVAFSPDGQRV-ASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRV 1150
Query: 217 FSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNV 276
SG+ D I WD + C T Q V F + + SG+++ + IW+
Sbjct: 1151 ASGS-IDGTIKIWDAASGTCT-QTLEGHGGWVQSVAF--SPDGQRVASGSSDKTIKIWDT 1206
Query: 277 NT 278
+
Sbjct: 1207 AS 1208
Score = 36.6 bits (83), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 83/191 (43%), Gaps = 15/191 (7%)
Query: 92 WDSVGGEIKATYRPYNQVDEV--THAYSLAFSLDGNKIYAGFLSE-VKIFSTDR-PGREC 147
W S ++A + Q E + S+AFS DG ++ +G + +KI+ T G +
Sbjct: 819 WISTISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQT 878
Query: 148 VSRNLKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHL 207
+ + V ++A +P + A G+ K I ++ + G L+GH G + +
Sbjct: 879 LEGH------GGSVWSVAFSPDRERV-ASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSV 931
Query: 208 EFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNT 267
FS +G + SG+ D I WD + C T S+ V F + + SG+
Sbjct: 932 AFSPDGQRVASGS-DDHTIKIWDAASGTCT-QTLEGHGSSVLSVAF--SPDGQRVASGSG 987
Query: 268 NGDLSIWNVNT 278
+ + IW+ +
Sbjct: 988 DKTIKIWDTAS 998
>sp|B4JWA1|LIS1_DROGR Lissencephaly-1 homolog OS=Drosophila grimshawi GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G+ L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|O94423|MFR1_SCHPO Meiotic fizzy-related protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mfr1 PE=1 SV=1
Length = 421
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 19/147 (12%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A+GT S +I ++ + + LKGH+ + L ++ N L SG KD I+ DLR P
Sbjct: 182 AVGTDSGVIYIWDIESTKSVRSLKGHSERVAALAWNDN--TLTSGG-KDEVILHHDLRAP 238
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPL 294
GC +V + L SG + +L +W+ +S PL
Sbjct: 239 GCCAEMM--KVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRSS------------RPL 284
Query: 295 YKFSAHQDCTNGVRWKHHKFERDLLVA 321
+KF H + W H +R +L +
Sbjct: 285 HKFEEHTAAVKAIGWSPH--QRGILAS 309
>sp|B4LQ21|LIS1_DROVI Lissencephaly-1 homolog OS=Drosophila virilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G+ L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGQCLLTLNGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|Q9VKK2|WDR59_DROME WD repeat-containing protein 59 homolog OS=Drosophila melanogaster
GN=CG4705 PE=1 SV=2
Length = 989
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 16/170 (9%)
Query: 161 VSAIAINPVHPDICALGTYSKI-IGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSG 219
V+ AI P + CA+ T I I + ++ L+GH +T +++ L
Sbjct: 88 VAEFAICPSRKEYCAIATSQHIDIVRWGTAEPHYEMSLRGHTRTVTDIDWHGKDPNLLVS 147
Query: 220 ARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTS 279
D WDLR P + V + S LL+ +GDL IW++
Sbjct: 148 CSIDTFSHIWDLREPRKPALSL-NAVCMSGATQVGFNRVSGNLLAAAHDGDLRIWDIRKG 206
Query: 280 NLPSSPYEESVQEPLYKFSAHQDCTNGVRWKHHKFERDLLVADATCSGQI 329
+ P+ + +AH + +G+ W H +R+ +A A+ G +
Sbjct: 207 SCPT-----------HYITAHLNRVHGINWSH---KRETCLATASQDGTV 242
>sp|Q8BPN8|DMXL2_MOUSE DmX-like protein 2 OS=Mus musculus GN=Dmxl2 PE=1 SV=3
Length = 3032
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 200 HNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCS 259
H+ G T L+++ LL SG RK I +D+R I HTF S + + D SC
Sbjct: 2895 HDHGATVLQYAPKQQLLISGGRKGY-ICIFDIRQRQLI-HTFQAHDSAIKALALD--SCE 2950
Query: 260 NYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYK 296
Y +G+ G++ +W + L S E ++ +++
Sbjct: 2951 EYFTTGSAEGNIKVWRLTGHGLIHSFKSEHAKQSIFR 2987
>sp|Q0P593|WDR69_BOVIN Outer row dynein assembly protein 16 homolog OS=Bos taurus GN=WDR69
PE=2 SV=1
Length = 415
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 158 KNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLF 217
+N+V AIA N + D A G++ K L+S G+ +GH I L F+ L+
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVA 193
Query: 218 SGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVN 277
+G+ D WD+++ F + + + + N +++G+ + +++W +
Sbjct: 194 TGSM-DTTAKLWDIQSGE---EVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEAD 249
Query: 278 T 278
T
Sbjct: 250 T 250
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
Query: 78 SYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIY-AGFLSEVK 136
S L SM LWD+V G+ AT ++ DE+ + F G I A +
Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHD--DEILDS---CFDYTGKLIATASADGTAR 328
Query: 137 IFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFF 196
IFS RECV+ K + +S I+ NP + G+ K ++ G+ L
Sbjct: 329 IFSA--ATRECVT---KLEGHEGEISKISFNP-QGNRLLTGSSDKTARIWDAQTGQCLQV 382
Query: 197 LKGHNGGITHLEFSSNGILLFSGARKD-CEI 226
L+GH I F+ G ++ +G++ + C I
Sbjct: 383 LEGHTDEIFSCAFNYKGDIIITGSKDNTCRI 413
>sp|O43818|U3IP2_HUMAN U3 small nucleolar RNA-interacting protein 2 OS=Homo sapiens
GN=RRP9 PE=1 SV=1
Length = 475
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 194 LFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVS------- 246
+ L+GH IT L + + +FS A KDC II W + + G LH PR
Sbjct: 139 IRVLRGHQLSITCLVVTPDDSAIFSAA-KDCSIIKWSVES-GRKLHVIPRAKKGAEGKPP 196
Query: 247 --TNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCT 304
++ + ++S YL SG+ + + IW + + LY F+ H+D
Sbjct: 197 GHSSHVLCMAISSDGKYLASGDRSKLILIWEAQSC------------QHLYTFTGHRDAV 244
Query: 305 NGVRWK 310
+G+ ++
Sbjct: 245 SGLAFR 250
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 80/173 (46%), Gaps = 27/173 (15%)
Query: 67 YPKTSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNK 126
Y +T + Y + + I LWD +++ + + Q YSL FS +G
Sbjct: 362 YVRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQ-----DIYSLDFSHNGRF 416
Query: 127 IYAGFLSEVKIFSTDRPGR-------ECVSRNLKPWFRKNIVSAIAINPVHPDICALGTY 179
I +G S DR R +C+ LK +N V+AIAI+P + A+G+
Sbjct: 417 IVSG--------SGDRTARLWDVETGQCI---LKLEI-ENGVTAIAISP-NDQFIAVGSL 463
Query: 180 SKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLR 232
+II ++S S G + L+GH + + FS + +L SG+ D I W+L+
Sbjct: 464 DQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSL-DKTIKVWELQ 514
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 177 GTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGC 236
GT + I L+ S + + GH I L+FS NG + SG+ D WD+ C
Sbjct: 378 GTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGS-GDRTARLWDVETGQC 436
Query: 237 IL 238
IL
Sbjct: 437 IL 438
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 15/187 (8%)
Query: 89 IHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSEVKIFSTDRPGRECV 148
I LWD+ G++ T ++ ++ FS DG I AG + + G+
Sbjct: 1179 IKLWDTTSGQLLMTLTGHS-----AGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLK 1233
Query: 149 SRNLKPWFRKNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLE 208
+ N ++ V++++ +P A + K I L+ +DG+ + LKGHN + +
Sbjct: 1234 TLN----GHQDWVNSLSFSP-DGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVN 1288
Query: 209 FSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTN 268
FSS+G + S +R D I W+ G L TF V F SN + S + +
Sbjct: 1289 FSSDGKAIASASR-DNTIKLWN--RHGIELETFTGHSGGVYAVNF--LPDSNIIASASLD 1343
Query: 269 GDLSIWN 275
+ +W
Sbjct: 1344 NTIRLWQ 1350
Score = 38.5 bits (88), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)
Query: 117 SLAFSLDGNKIYAGFLSE-VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPDICA 175
S++ S DG I +G L + +K++S D GR + N ++ V +++ +P I +
Sbjct: 1077 SISISRDGQTIASGSLDKTIKLWSRD--GRLFRTLN----GHEDAVYSVSFSPDGQTIAS 1130
Query: 176 LGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPG 235
G+ K I L+ SDG L + GH + ++ FS +G L S A D I WD G
Sbjct: 1131 GGS-DKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLAS-ASSDHSIKLWD-TTSG 1187
Query: 236 CILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLY 295
+L T + V F + + +G+ + + +W+ L L
Sbjct: 1188 QLLMTLTGHSAGVITVRF--SPDGQTIAAGSEDKTVKLWHRQDGKL------------LK 1233
Query: 296 KFSAHQDCTNGV 307
+ HQD N +
Sbjct: 1234 TLNGHQDWVNSL 1245
>sp|Q00664|LIS1_EMENI Nuclear distribution protein nudF OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=nudF PE=1 SV=1
Length = 444
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 158 KNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSN-GILL 216
++ V+ +A +PV + A G+ I ++ G LKGH G++ L++ G L
Sbjct: 114 RDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 217 FSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNV 276
+ D I WD + T + V F LTS N+L+S + +G L IW+V
Sbjct: 173 LASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRF-LTSNDNHLISASRDGTLRIWDV 231
Query: 277 NT 278
+T
Sbjct: 232 ST 233
Score = 38.1 bits (87), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 172 DICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDL 231
+ A G K I L+ ++ GR + L GH+ + L F G LFS D I CWDL
Sbjct: 321 EFVATGARDKTIKLW-EARGRLIKTLHGHDNWVRGLVFHPGGKYLFS-VSDDKTIRCWDL 378
Query: 232 RNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTN 268
G R V T + SC + S NT+
Sbjct: 379 SQEG-------RLVKTISGAHEHFVSCIRWAPSPNTD 408
>sp|O35142|COPB2_RAT Coatomer subunit beta' OS=Rattus norvegicus GN=Copb2 PE=1 SV=3
Length = 905
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 18/132 (13%)
Query: 161 VSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNG--ILLFS 218
V I INP + A + + I ++ P F L+GH G+ +++ S G L S
Sbjct: 145 VMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS 204
Query: 219 GARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNY------LLSGNTNGDLS 272
GA D + WD +N C+ P + N SC+ + +++G+ +G +
Sbjct: 205 GA-DDRLVKIWDYQNKTCV--QTPEGHAQN-------VSCATFHPELPIIITGSEDGTVR 254
Query: 273 IWNVNTSNLPSS 284
IW+ +T L S+
Sbjct: 255 IWHSSTYRLEST 266
>sp|P97499|TEP1_MOUSE Telomerase protein component 1 OS=Mus musculus GN=Tep1 PE=1 SV=1
Length = 2629
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 25/117 (21%)
Query: 197 LKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLR--NPGCILHTFPRQVSTNQRVYFD 254
L+GH G + FS +G +L + R D ++CWD++ ++HTF S+ R +
Sbjct: 2065 LRGHEGPVCCCSFSPDGGILATAGR-DRNLLCWDMKIAQAPLLIHTF----SSCHRDW-- 2117
Query: 255 LTSCS----NYLLSGNTNGDLSIWNVNTSNLPSSPYEESVQEPLYKFSAHQDCTNGV 307
+T C+ N L+S +++G + +WN E+ Q+ L +FS HQ + V
Sbjct: 2118 ITGCAWTKDNILVSCSSDGSVGLWN-----------PEAGQQ-LGQFSGHQSAVSAV 2162
>sp|B4KT48|LIS1_DROMO Lissencephaly-1 homolog OS=Drosophila mojavensis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQSVKVWE 409
>sp|A1DHW6|SCONB_NEOFI Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
FGSC A1164 / NRRL 181) GN=sconB PE=3 SV=1
Length = 689
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 35/177 (19%)
Query: 99 IKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSEVKIFSTDRPGRECVSRNLKPWFRK 158
K YRP+ +V Y F + N Y +++F G C+ F
Sbjct: 325 FKTRYRPWKEV------YKDRFKVGTNWKYG--RCSIRVFKGHSNGIMCLQ------FED 370
Query: 159 NIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFS 218
NI+ A G+Y I ++ G L LKGH GI L+F + L S
Sbjct: 371 NIL-------------ATGSYDATIKIWDTETGEELRTLKGHRSGIRCLQF--DDTKLIS 415
Query: 219 GARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
G+ D + W+ R CI T+ ++FD T L SG+ + + IWN
Sbjct: 416 GS-MDHTLKVWNWRTGECI-STYSGHRGGVVGLHFDAT----ILASGSVDKTVKIWN 466
Score = 35.0 bits (79), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 22/179 (12%)
Query: 76 FTSYFLCSSMY-APIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSE 134
F L + Y A I +WD+ GE T + + + D K+ +G +
Sbjct: 368 FEDNILATGSYDATIKIWDTETGEELRTLKGHR-------SGIRCLQFDDTKLISGSMDH 420
Query: 135 VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPD--ICALGTYSKIIGLFSDSDGR 192
R G EC+S R +V +H D I A G+ K + +++ D +
Sbjct: 421 TLKVWNWRTG-ECIS--TYSGHRGGVVG------LHFDATILASGSVDKTVKIWNFED-K 470
Query: 193 PLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRV 251
L+GH + + S +FS A DC + WDL CI TF V Q+V
Sbjct: 471 STCLLRGHTDWVNAVRVDSASRTVFS-ASDDCTVKLWDLDTKSCI-RTFHGHVGQVQQV 527
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 197 LKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLT 256
KGH+ GI L+F N +L +G+ D I WD G L T S + + FD T
Sbjct: 356 FKGHSNGIMCLQFEDN--ILATGS-YDATIKIWDTET-GEELRTLKGHRSGIRCLQFDDT 411
Query: 257 SCSNYLLSGNTNGDLSIWNVNTSNLPSS 284
L+SG+ + L +WN T S+
Sbjct: 412 K----LISGSMDHTLKVWNWRTGECIST 435
>sp|B4MY65|LIS1_DROWI Lissencephaly-1 homolog OS=Drosophila willistoni GN=Lis-1 PE=3 SV=1
Length = 409
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 311 ASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 369
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 370 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 407
>sp|B4QHG6|LIS1_DROSI Lissencephaly-1 homolog OS=Drosophila simulans GN=Lis-1 PE=3 SV=1
Length = 411
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|B4HSL3|LIS1_DROSE Lissencephaly-1 homolog OS=Drosophila sechellia GN=Lis-1 PE=3 SV=1
Length = 411
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|Q7KNS3|LIS1_DROME Lissencephaly-1 homolog OS=Drosophila melanogaster GN=Lis-1 PE=1
SV=2
Length = 411
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|B4P6P9|LIS1_DROYA Lissencephaly-1 homolog OS=Drosophila yakuba GN=Lis-1 PE=3 SV=1
Length = 411
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|B3NPW0|LIS1_DROER Lissencephaly-1 homolog OS=Drosophila erecta GN=Lis-1 PE=3 SV=1
Length = 411
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|Q291L9|LIS1_DROPS Lissencephaly-1 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=Lis-1 PE=3 SV=1
Length = 411
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|B4GAJ1|LIS1_DROPE Lissencephaly-1 homolog OS=Drosophila persimilis GN=Lis-1 PE=3 SV=1
Length = 411
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNP 234
A G+ K I ++ S G L L GH+ + L F G L S A D I WDLRN
Sbjct: 313 ASGSRDKTIRIWDVSVGLCLLTLNGHDNWVRGLAFHPGGKYLVS-ASDDKTIRVWDLRNK 371
Query: 235 GCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
C+ + Q D Y++SG+ + + +W
Sbjct: 372 RCMKTLYAHQHFCTS---IDFHKAHPYVISGSVDQTVKVWE 409
>sp|Q8N136|WDR69_HUMAN Outer row dynein assembly protein 16 homolog OS=Homo sapiens
GN=WDR69 PE=1 SV=1
Length = 415
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Query: 158 KNIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLF 217
+N+V AIA N + D A G++ K L+S G+ +GH I L F+ L+
Sbjct: 134 RNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVA 193
Query: 218 SGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVN 277
+G+ D WD++N + + + + + + + +++G+ + + +W+ +
Sbjct: 194 TGSM-DTTAKLWDIQNGE---EVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDAD 249
Query: 278 T 278
T
Sbjct: 250 T 250
>sp|Q00659|SCONB_EMENI Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=sconB PE=3 SV=2
Length = 678
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 76/210 (36%), Gaps = 48/210 (22%)
Query: 99 IKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSEVKIFSTDRPGRECVSRNLKPWFRK 158
K YRP+ +V Y F + N Y +K F G C+ F
Sbjct: 314 FKTRYRPWKEV------YKDRFKVGTNWKYG--RCSIKTFKGHTNGVMCLQ------FED 359
Query: 159 NIVSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFS 218
NI+ A G+Y I ++ G L L+GH GI L+F + L S
Sbjct: 360 NIL-------------ATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQF--DDTKLIS 404
Query: 219 GARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNT 278
G+ D I W+ R CI T+ ++FD ++ L SG+ + + IWN
Sbjct: 405 GS-MDRTIKVWNWRTGECI-STYTGHRGGVIGLHFD----ASILASGSVDKTVKIWNFE- 457
Query: 279 SNLPSSPYEESVQEPLYKFSAHQDCTNGVR 308
+ + H D N VR
Sbjct: 458 ------------DKSTFSLRGHTDWVNAVR 475
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 22/179 (12%)
Query: 76 FTSYFLCSSMY-APIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSE 134
F L + Y I +WD+ GE T R + + D K+ +G +
Sbjct: 357 FEDNILATGSYDTTIKIWDTETGEELRTLRGHE-------SGIRCLQFDDTKLISGSMDR 409
Query: 135 VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPD--ICALGTYSKIIGLFSDSDGR 192
R G EC+S R ++ +H D I A G+ K + +++ D +
Sbjct: 410 TIKVWNWRTG-ECISTYTG--HRGGVIG------LHFDASILASGSVDKTVKIWNFED-K 459
Query: 193 PLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRV 251
F L+GH + + ++ +FS A DC + WDL CI TF V Q+V
Sbjct: 460 STFSLRGHTDWVNAVRVDTSSRTVFS-ASDDCTVRLWDLDTKTCI-RTFHGHVGQVQQV 516
>sp|Q9USN3|UTP13_SCHPO Probable U3 small nucleolar RNA-associated protein 13
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=utp13 PE=3 SV=3
Length = 777
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 110 DEVTHAYSLAFSLDGNKIYAGFLSEVKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPV 169
DE + +LA + D K+ A F S + GR +++K + V + I+P
Sbjct: 59 DEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRI--KSMKA--HETPVITMTIDPT 114
Query: 170 HPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFS--SNGILLFSGARKDCEII 227
+ + A G ++ ++ + +GH G I+ L F N +L SGA D +
Sbjct: 115 NT-LLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGA-DDSRVR 172
Query: 228 CWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWNVNT-SNLPSSPY 286
WDL N + F S + + F+ T ++LLSG+ + + +WN+ S + + P
Sbjct: 173 LWDL-NSSRSMAVFEGHSSVIRGLTFEPTG--SFLLSGSRDKTVQVWNIKKRSAVRTIPV 229
Query: 287 EESVQ 291
SV+
Sbjct: 230 FHSVE 234
>sp|Q5R664|COPB2_PONAB Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1
Length = 906
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 161 VSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNG--ILLFS 218
V I INP + A + + I ++ P F L+GH G+ +++ S G L S
Sbjct: 145 VMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS 204
Query: 219 GARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNY------LLSGNTNGDLS 272
GA D + WD +N C+ T SC+++ +++G+ +G +
Sbjct: 205 GA-DDRLVKIWDYQNKTCV-QTLEGHAQN--------VSCASFHPELPIIITGSEDGTVR 254
Query: 273 IWNVNTSNLPSS 284
IW+ +T L S+
Sbjct: 255 IWHSSTYRLEST 266
>sp|P35606|COPB2_HUMAN Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2
Length = 906
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 161 VSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNG--ILLFS 218
V I INP + A + + I ++ P F L+GH G+ +++ S G L S
Sbjct: 145 VMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS 204
Query: 219 GARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNY------LLSGNTNGDLS 272
GA D + WD +N C+ T SC+++ +++G+ +G +
Sbjct: 205 GA-DDRLVKIWDYQNKTCV-QTLEGHAQN--------VSCASFHPELPIIITGSEDGTVR 254
Query: 273 IWNVNTSNLPSS 284
IW+ +T L S+
Sbjct: 255 IWHSSTYRLEST 266
>sp|P35605|COPB2_BOVIN Coatomer subunit beta' OS=Bos taurus GN=COPB2 PE=1 SV=3
Length = 906
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 161 VSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNG--ILLFS 218
V I INP + A + + I ++ P F L+GH G+ +++ S G L S
Sbjct: 145 VMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS 204
Query: 219 GARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNY------LLSGNTNGDLS 272
GA D + WD +N C+ T SC+++ +++G+ +G +
Sbjct: 205 GA-DDRLVKIWDYQNKTCV-QTLEGHAQN--------VSCASFHPELPIIITGSEDGTVR 254
Query: 273 IWNVNTSNLPSS 284
IW+ +T L S+
Sbjct: 255 IWHSSTYRLEST 266
>sp|O55029|COPB2_MOUSE Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2
Length = 905
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 18/132 (13%)
Query: 161 VSAIAINPVHPDICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNG--ILLFS 218
V I INP + A + + I ++ P F L+GH G+ +++ S G L S
Sbjct: 145 VMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLIS 204
Query: 219 GARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLTSCSNY------LLSGNTNGDLS 272
GA D + WD +N C+ T SC+++ +++G+ +G +
Sbjct: 205 GA-DDRLVKIWDYQNKTCV-QTLEGHAQN--------VSCASFHPELPIIITGSEDGTVR 254
Query: 273 IWNVNTSNLPSS 284
IW+ +T L S+
Sbjct: 255 IWHSSTYRLEST 266
>sp|Q4X0A9|SCONB_ASPFU Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=sconB PE=3 SV=1
Length = 696
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 172 DICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDL 231
+I A G+Y I ++ G L LKGH GI L+F + L SG+ D + W+
Sbjct: 378 NILATGSYDATIKIWDTETGEELRTLKGHQSGIRCLQF--DDTKLISGS-MDHTLKVWNW 434
Query: 232 RNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
R CI T+ ++FD T L SG+ + + IWN
Sbjct: 435 RTGECI-STYSGHRGGVVGLHFDAT----ILASGSVDKTVKIWN 473
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 22/179 (12%)
Query: 76 FTSYFLCSSMY-APIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSE 134
F L + Y A I +WD+ GE T + + + D K+ +G +
Sbjct: 375 FEDNILATGSYDATIKIWDTETGEELRTLKGH-------QSGIRCLQFDDTKLISGSMDH 427
Query: 135 VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPD--ICALGTYSKIIGLFSDSDGR 192
R G EC+S R +V +H D I A G+ K + +++ D +
Sbjct: 428 TLKVWNWRTG-ECIS--TYSGHRGGVVG------LHFDATILASGSVDKTVKIWNFED-K 477
Query: 193 PLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRV 251
L+GH + + S +FS A DC + WDL CI TF V Q+V
Sbjct: 478 STCLLRGHTDWVNAVRVDSASRTVFS-ASDDCTVKLWDLDTKSCI-RTFHGHVGQVQQV 534
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 197 LKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLT 256
KGH+ GI L+F N +L +G+ D I WD G L T S + + FD T
Sbjct: 363 FKGHSNGIMCLQFEDN--ILATGS-YDATIKIWDTET-GEELRTLKGHQSGIRCLQFDDT 418
Query: 257 SCSNYLLSGNTNGDLSIWNVNTSNLPSS 284
L+SG+ + L +WN T S+
Sbjct: 419 K----LISGSMDHTLKVWNWRTGECIST 442
>sp|B0XTS1|SCONB_ASPFC Probable E3 ubiquitin ligase complex SCF subunit sconB
OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 /
FGSC A1163) GN=sconB PE=3 SV=1
Length = 696
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 172 DICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDL 231
+I A G+Y I ++ G L LKGH GI L+F + L SG+ D + W+
Sbjct: 378 NILATGSYDATIKIWDTETGEELRTLKGHQSGIRCLQF--DDTKLISGS-MDHTLKVWNW 434
Query: 232 RNPGCILHTFPRQVSTNQRVYFDLTSCSNYLLSGNTNGDLSIWN 275
R CI T+ ++FD T L SG+ + + IWN
Sbjct: 435 RTGECI-STYSGHRGGVVGLHFDAT----ILASGSVDKTVKIWN 473
Score = 35.0 bits (79), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 70/179 (39%), Gaps = 22/179 (12%)
Query: 76 FTSYFLCSSMY-APIHLWDSVGGEIKATYRPYNQVDEVTHAYSLAFSLDGNKIYAGFLSE 134
F L + Y A I +WD+ GE T + + + D K+ +G +
Sbjct: 375 FEDNILATGSYDATIKIWDTETGEELRTLKGH-------QSGIRCLQFDDTKLISGSMDH 427
Query: 135 VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPD--ICALGTYSKIIGLFSDSDGR 192
R G EC+S R +V +H D I A G+ K + +++ D +
Sbjct: 428 TLKVWNWRTG-ECIS--TYSGHRGGVVG------LHFDATILASGSVDKTVKIWNFED-K 477
Query: 193 PLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRV 251
L+GH + + S +FS A DC + WDL CI TF V Q+V
Sbjct: 478 STCLLRGHTDWVNAVRVDSASRTVFS-ASDDCTVKLWDLDTKSCI-RTFHGHVGQVQQV 534
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 197 LKGHNGGITHLEFSSNGILLFSGARKDCEIICWDLRNPGCILHTFPRQVSTNQRVYFDLT 256
KGH+ GI L+F N +L +G+ D I WD G L T S + + FD T
Sbjct: 363 FKGHSNGIMCLQFEDN--ILATGS-YDATIKIWDTET-GEELRTLKGHQSGIRCLQFDDT 418
Query: 257 SCSNYLLSGNTNGDLSIWNVNTSNLPSS 284
L+SG+ + L +WN T S+
Sbjct: 419 K----LISGSMDHTLKVWNWRTGECIST 442
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 4 EEDV---DEAPDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGI 60
E+D+ D PDG L++ S D +R +DL + + + TL I++G
Sbjct: 296 EQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRT--------------SQCSLTLSIEDG-- 339
Query: 61 IYDYVWYPKTSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQ-----VDEVTHA 115
T ++ S+ + +WDS G + N+ D V
Sbjct: 340 -------VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSV--- 389
Query: 116 YSLAFSLDGNKIYAGFLSE-VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPDIC 174
YS+AFS +G +I +G L VK++ + + + + K+ V ++ P + I
Sbjct: 390 YSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYIL 449
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGI---LLFSGARKDCEIICW 229
+ G+ + + + + G PL L+GH + + S N +F+ DC+ W
Sbjct: 450 S-GSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 506
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 171 PD--ICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIIC 228
PD + A G K+I ++ S R + L+GH I L+F +G L SG+ D +
Sbjct: 264 PDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS-GDRSVRI 322
Query: 229 WDLRNPGCIL 238
WDLR C L
Sbjct: 323 WDLRTSQCSL 332
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 97/238 (40%), Gaps = 39/238 (16%)
Query: 4 EEDV---DEAPDGTCLLTNSNDNHLRTFDLPSELHCKSVWRPSNQRPKLNYTLKIKEGGI 60
E+D+ D PDG L++ S D +R +DL + + + TL I++G
Sbjct: 297 EQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRT--------------SQCSLTLSIEDG-- 340
Query: 61 IYDYVWYPKTSSIDGFTSYFLCSSMYAPIHLWDSVGGEIKATYRPYNQ-----VDEVTHA 115
T ++ S+ + +WDS G + N+ D V
Sbjct: 341 -------VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSV--- 390
Query: 116 YSLAFSLDGNKIYAGFLSE-VKIFSTDRPGRECVSRNLKPWFRKNIVSAIAINPVHPDIC 174
YS+AFS +G +I +G L VK++ + + + + K+ V ++ P + I
Sbjct: 391 YSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYIL 450
Query: 175 ALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGI---LLFSGARKDCEIICW 229
+ G+ + + + + G PL L+GH + + S N +F+ DC+ W
Sbjct: 451 S-GSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFATGSGDCKARIW 507
Score = 38.9 bits (89), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 171 PD--ICALGTYSKIIGLFSDSDGRPLFFLKGHNGGITHLEFSSNGILLFSGARKDCEIIC 228
PD + A G K+I ++ S R + L+GH I L+F +G L SG+ D +
Sbjct: 265 PDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS-GDRSVRI 323
Query: 229 WDLRNPGCIL 238
WDLR C L
Sbjct: 324 WDLRTSQCSL 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.436
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,749,805
Number of Sequences: 539616
Number of extensions: 5984710
Number of successful extensions: 14052
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 454
Number of HSP's that attempted gapping in prelim test: 13127
Number of HSP's gapped (non-prelim): 1257
length of query: 334
length of database: 191,569,459
effective HSP length: 118
effective length of query: 216
effective length of database: 127,894,771
effective search space: 27625270536
effective search space used: 27625270536
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)