BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2313
(62 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VHN2|NMD3B_RAT Glutamate receptor ionotropic, NMDA 3B OS=Rattus norvegicus
GN=Grin3b PE=1 SV=2
Length = 1002
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLLE +A++L FDF LYIV DG YG +R+ +W G+VGDL+ G AHM+ + S++S
Sbjct: 481 IDLLERLAEDLAFDFELYIVGDGKYGA-LRDG---RWTGLVGDLLAGRAHMAVTSFSINS 536
Query: 61 TR 62
R
Sbjct: 537 AR 538
>sp|Q91ZU9|NMD3B_MOUSE Glutamate receptor ionotropic, NMDA 3B OS=Mus musculus GN=Grin3b
PE=1 SV=1
Length = 1003
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLLE +A++L FDF LYIV DG YG +R+ +W G+VGDL+ G AHM+ + S++S
Sbjct: 481 IDLLERLAEDLAFDFELYIVGDGKYGA-LRDG---RWTGLVGDLLAGRAHMAVTSFSINS 536
Query: 61 TR 62
R
Sbjct: 537 AR 538
>sp|Q8TCU5|NMD3A_HUMAN Glutamate receptor ionotropic, NMDA 3A OS=Homo sapiens GN=GRIN3A
PE=1 SV=2
Length = 1115
Score = 67.0 bits (162), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLLE IA+++ FDF LYIV DG YG + W G+VGDL+ GTAHM+ + S+++
Sbjct: 581 IDLLEKIAEDMNFDFDLYIVGDGKYGAW----KNGHWTGLVGDLLRGTAHMAVTSFSINT 636
Query: 61 TR 62
R
Sbjct: 637 AR 638
>sp|Q9R1M7|NMD3A_RAT Glutamate receptor ionotropic, NMDA 3A OS=Rattus norvegicus
GN=Grin3a PE=1 SV=1
Length = 1135
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLLE +A+++ FDF LYIV DG YG + W G+VGDL++GTA+M+ + S+++
Sbjct: 581 IDLLEQLAEDMNFDFDLYIVGDGKYGAW----KNGHWTGLVGDLLSGTANMAVTSFSINT 636
Query: 61 TR 62
R
Sbjct: 637 AR 638
>sp|O60391|NMD3B_HUMAN Glutamate receptor ionotropic, NMDA 3B OS=Homo sapiens GN=GRIN3B
PE=2 SV=2
Length = 1043
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLLE +A++ FDF LY+V DG YG +R+ +W G+VGDL+ G AHM+ + S++S
Sbjct: 481 IDLLERLAEDTPFDFELYLVGDGKYGA-LRDG---RWTGLVGDLLAGRAHMAVTSFSINS 536
Query: 61 TR 62
R
Sbjct: 537 AR 538
>sp|P35439|NMDZ1_RAT Glutamate receptor ionotropic, NMDA 1 OS=Rattus norvegicus GN=Grin1
PE=1 SV=1
Length = 938
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDK--WNGVVGDLVTGTAHMSFAALSV 58
+DLL +A+ + F + +++VADG +GT+ R N +K WNG++G+L++G A M A L++
Sbjct: 460 IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI 519
Query: 59 SSTR 62
++ R
Sbjct: 520 NNER 523
>sp|Q05586|NMDZ1_HUMAN Glutamate receptor ionotropic, NMDA 1 OS=Homo sapiens GN=GRIN1 PE=1
SV=1
Length = 938
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDK--WNGVVGDLVTGTAHMSFAALSV 58
+DLL +A+ + F + +++VADG +GT+ R N +K WNG++G+L++G A M A L++
Sbjct: 460 IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI 519
Query: 59 SSTR 62
++ R
Sbjct: 520 NNER 523
>sp|Q5R1P0|NMDZ1_CANFA Glutamate receptor ionotropic, NMDA 1 OS=Canis familiaris GN=GRIN1
PE=2 SV=2
Length = 943
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDK--WNGVVGDLVTGTAHMSFAALSV 58
+DLL +A+ + F + +++VADG +GT+ R N +K WNG++G+L++G A M A L++
Sbjct: 481 IDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI 540
Query: 59 SSTR 62
++ R
Sbjct: 541 NNER 544
>sp|P35438|NMDZ1_MOUSE Glutamate receptor ionotropic, NMDA 1 OS=Mus musculus GN=Grin1 PE=1
SV=1
Length = 938
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDK--WNGVVGDLVTGTAHMSFAALSV 58
+DLL +A+ + F + +++VADG +GT+ R N +K WNG++G+L++G A M A L++
Sbjct: 460 VDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTI 519
Query: 59 SSTR 62
++ R
Sbjct: 520 NNER 523
>sp|P20262|GLRK_LITBE Probable glutamate receptor OS=Lithobates berlandieri PE=1 SV=1
Length = 487
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLL + Q L F++ L+IV DG YG+K +Q+ W+G+VG+++ A ++ A L+++S
Sbjct: 65 IDLLSELTQSLGFNYTLHIVKDGKYGSK---DQEGNWSGMVGEIIRKEADLAIAPLTITS 121
Query: 61 TR 62
R
Sbjct: 122 VR 123
>sp|Q00960|NMDE2_RAT Glutamate receptor ionotropic, NMDA 2B OS=Rattus norvegicus
GN=Grin2b PE=1 SV=1
Length = 1482
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ I++ ++F + LY+V +G +G K+ WNG++G++V A+M+ +L+++
Sbjct: 462 IDILKKISKSVKFTYDLYLVTNGKHGKKI----NGTWNGMIGEVVMKRAYMAVGSLTINE 517
Query: 61 TR 62
R
Sbjct: 518 ER 519
>sp|Q5R1P3|NMDE2_CANFA Glutamate receptor ionotropic, NMDA 2B OS=Canis familiaris
GN=GRIN2B PE=2 SV=1
Length = 1485
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ I++ ++F + LY+V +G +G K+ WNG++G++V A+M+ +L+++
Sbjct: 462 IDILKKISKSVKFTYDLYLVTNGKHGKKI----NGTWNGMIGEVVMKRAYMAVGSLTINE 517
Query: 61 TR 62
R
Sbjct: 518 ER 519
>sp|Q13224|NMDE2_HUMAN Glutamate receptor ionotropic, NMDA 2B OS=Homo sapiens GN=GRIN2B
PE=1 SV=3
Length = 1484
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ I++ ++F + LY+V +G +G K+ WNG++G++V A+M+ +L+++
Sbjct: 462 IDILKKISKSVKFTYDLYLVTNGKHGKKI----NGTWNGMIGEVVMKRAYMAVGSLTINE 517
Query: 61 TR 62
R
Sbjct: 518 ER 519
>sp|Q01097|NMDE2_MOUSE Glutamate receptor ionotropic, NMDA 2B OS=Mus musculus GN=Grin2b
PE=1 SV=3
Length = 1482
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ I++ ++F + LY+V +G +G K+ WNG++G++V A+M+ +L+++
Sbjct: 462 IDILKKISKSVKFTYDLYLVTNGKHGKKI----NGTWNGMIGEVVMKRAYMAVGSLTINE 517
Query: 61 TR 62
R
Sbjct: 518 ER 519
>sp|P19491|GRIA2_RAT Glutamate receptor 2 OS=Rattus norvegicus GN=Gria2 PE=1 SV=2
Length = 883
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ F + L IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 447 VDLAAEIAKHCGFKYKLTIVGDGKYGA--RDADTKIWNGMVGELVYGKADIAIAPLTITL 504
Query: 61 TR 62
R
Sbjct: 505 VR 506
>sp|Q38PU7|GRIA2_MACFA Glutamate receptor 2 OS=Macaca fascicularis GN=GRIA2 PE=2 SV=1
Length = 883
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ F + L IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 447 VDLAAEIAKHCGFKYKLTIVGDGKYGA--RDADTKIWNGMVGELVYGKADIAIAPLTITL 504
Query: 61 TR 62
R
Sbjct: 505 VR 506
>sp|P23819|GRIA2_MOUSE Glutamate receptor 2 OS=Mus musculus GN=Gria2 PE=1 SV=3
Length = 883
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ F + L IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 447 VDLAAEIAKHCGFKYKLTIVGDGKYGA--RDADTKIWNGMVGELVYGKADIAIAPLTITL 504
Query: 61 TR 62
R
Sbjct: 505 VR 506
>sp|P42262|GRIA2_HUMAN Glutamate receptor 2 OS=Homo sapiens GN=GRIA2 PE=1 SV=3
Length = 883
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ F + L IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 447 VDLAAEIAKHCGFKYKLTIVGDGKYGA--RDADTKIWNGMVGELVYGKADIAIAPLTITL 504
Query: 61 TR 62
R
Sbjct: 505 VR 506
>sp|Q9Z2W9|GRIA3_MOUSE Glutamate receptor 3 OS=Mus musculus GN=Gria3 PE=1 SV=2
Length = 888
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + L IV DG YG R+ + WNG+VG+LV G A ++ A L+++
Sbjct: 450 VDLAYEIAKHVRIKYKLSIVGDGKYGA--RDPETKIWNGMVGELVYGRADIAVAPLTITL 507
Query: 61 TR 62
R
Sbjct: 508 VR 509
>sp|Q38PU6|GRIA3_MACFA Glutamate receptor 3 OS=Macaca fascicularis GN=GRIA3 PE=2 SV=1
Length = 894
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + L IV DG YG R+ + WNG+VG+LV G A ++ A L+++
Sbjct: 456 VDLAYEIAKHVRIKYKLSIVGDGKYGA--RDPETKIWNGMVGELVYGRADIAVAPLTITL 513
Query: 61 TR 62
R
Sbjct: 514 VR 515
>sp|P42263|GRIA3_HUMAN Glutamate receptor 3 OS=Homo sapiens GN=GRIA3 PE=1 SV=2
Length = 894
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + L IV DG YG R+ + WNG+VG+LV G A ++ A L+++
Sbjct: 456 VDLAYEIAKHVRIKYKLSIVGDGKYGA--RDPETKIWNGMVGELVYGRADIAVAPLTITL 513
Query: 61 TR 62
R
Sbjct: 514 VR 515
>sp|P19492|GRIA3_RAT Glutamate receptor 3 OS=Rattus norvegicus GN=Gria3 PE=1 SV=1
Length = 888
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + L IV DG YG R+ + WNG+VG+LV G A ++ A L+++
Sbjct: 450 VDLAYEIAKHVRIKYKLSIVGDGKYGA--RDPETKIWNGMVGELVYGRADIAVAPLTITL 507
Query: 61 TR 62
R
Sbjct: 508 VR 509
>sp|P23818|GRIA1_MOUSE Glutamate receptor 1 OS=Mus musculus GN=Gria1 PE=1 SV=1
Length = 907
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
++L IA+ + + + L IV+DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 440 VELAAEIAKHVGYSYRLEIVSDGKYGA--RDPDTKAWNGMVGELVYGRADVAVAPLTITL 497
Query: 61 TR 62
R
Sbjct: 498 VR 499
>sp|P19490|GRIA1_RAT Glutamate receptor 1 OS=Rattus norvegicus GN=Gria1 PE=1 SV=2
Length = 907
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
++L IA+ + + + L IV+DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 440 VELAAEIAKHVGYSYRLEIVSDGKYGA--RDPDTKAWNGMVGELVYGRADVAVAPLTITL 497
Query: 61 TR 62
R
Sbjct: 498 VR 499
>sp|Q38PU8|GRIA1_MACFA Glutamate receptor 1 OS=Macaca fascicularis GN=GRIA1 PE=2 SV=1
Length = 906
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
++L IA+ + + + L IV+DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 440 VELAAEIAKHVGYSYRLEIVSDGKYGA--RDPDTKAWNGMVGELVYGRADVAVAPLTITL 497
Query: 61 TR 62
R
Sbjct: 498 VR 499
>sp|P42261|GRIA1_HUMAN Glutamate receptor 1 OS=Homo sapiens GN=GRIA1 PE=1 SV=2
Length = 906
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
++L IA+ + + + L IV+DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 440 VELAAEIAKHVGYSYRLEIVSDGKYGA--RDPDTKAWNGMVGELVYGRADVAVAPLTITL 497
Query: 61 TR 62
R
Sbjct: 498 VR 499
>sp|Q9Z2W8|GRIA4_MOUSE Glutamate receptor 4 OS=Mus musculus GN=Gria4 PE=1 SV=2
Length = 902
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + + IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 448 VDLASEIAKHIGIKYKIAIVPDGKYGA--RDADTKIWNGMVGELVYGKAEIAIAPLTITL 505
Query: 61 TR 62
R
Sbjct: 506 VR 507
>sp|P48058|GRIA4_HUMAN Glutamate receptor 4 OS=Homo sapiens GN=GRIA4 PE=2 SV=2
Length = 902
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + + IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 448 VDLASEIAKHIGIKYKIAIVPDGKYGA--RDADTKIWNGMVGELVYGKAEIAIAPLTITL 505
Query: 61 TR 62
R
Sbjct: 506 VR 507
>sp|Q38PU5|GRIA4_MACFA Glutamate receptor 4 OS=Macaca fascicularis GN=GRIA4 PE=2 SV=1
Length = 902
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + + IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 448 VDLASEIAKHIGIKYKIAIVPDGKYGA--RDADTKIWNGMVGELVYGKAEIAIAPLTITL 505
Query: 61 TR 62
R
Sbjct: 506 VR 507
>sp|P19493|GRIA4_RAT Glutamate receptor 4 OS=Rattus norvegicus GN=Gria4 PE=1 SV=1
Length = 902
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ + + + IV DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 448 VDLASEIAKHIGIKYKIAIVPDGKYGA--RDADTKIWNGMVGELVYGKAEIAIAPLTITL 505
Query: 61 TR 62
R
Sbjct: 506 VR 507
>sp|Q5R4M0|GRIA2_PONAB Glutamate receptor 2 OS=Pongo abelii GN=GRIA2 PE=2 SV=1
Length = 883
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DL IA+ F + L I DG YG R+ WNG+VG+LV G A ++ A L+++
Sbjct: 447 VDLAAEIAKHCGFKYKLTIAGDGKYGA--RDADTKIWNGMVGELVYGKADIAIAPLTITL 504
Query: 61 TR 62
R
Sbjct: 505 VR 506
>sp|B1AS29|GRIK3_MOUSE Glutamate receptor ionotropic, kainate 3 OS=Mus musculus GN=Grik3
PE=2 SV=1
Length = 919
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLL+ +A L F + + +V DG YG ++ K +WNG+V +L+ A ++ A L+++
Sbjct: 467 IDLLKELAHILGFSYEIRLVEDGKYGA---QDDKGQWNGMVKELIDHKADLAVAPLTITH 523
Query: 61 TR 62
R
Sbjct: 524 VR 525
>sp|Q13003|GRIK3_HUMAN Glutamate receptor ionotropic, kainate 3 OS=Homo sapiens GN=GRIK3
PE=2 SV=3
Length = 919
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLL+ +A L F + + +V DG YG ++ K +WNG+V +L+ A ++ A L+++
Sbjct: 467 IDLLKELAHILGFSYEIRLVEDGKYGA---QDDKGQWNGMVKELIDHKADLAVAPLTITH 523
Query: 61 TR 62
R
Sbjct: 524 VR 525
>sp|Q38PU2|GRIK3_MACFA Glutamate receptor ionotropic, kainate 3 OS=Macaca fascicularis
GN=GRIK3 PE=2 SV=1
Length = 919
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLL+ +A L F + + +V DG YG ++ K +WNG+V +L+ A ++ A L+++
Sbjct: 467 IDLLKELAHILGFSYEIRLVEDGKYGA---QDDKGQWNGMVKELIDHKADLAVAPLTITH 523
Query: 61 TR 62
R
Sbjct: 524 VR 525
>sp|P42264|GRIK3_RAT Glutamate receptor ionotropic, kainate 3 OS=Rattus norvegicus
GN=Grik3 PE=1 SV=1
Length = 919
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLL+ +A L F + + +V DG YG ++ K +WNG+V +L+ A ++ A L+++
Sbjct: 467 IDLLKELAHILGFSYEIRLVEDGKYGA---QDDKGQWNGMVKELIDHKADLAVAPLTITH 523
Query: 61 TR 62
R
Sbjct: 524 VR 525
>sp|Q62640|GRID1_RAT Glutamate receptor ionotropic, delta-1 OS=Rattus norvegicus
GN=Grid1 PE=2 SV=1
Length = 1009
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ L F + +Y DG YG ++ WNG++G+L++ A ++ +A++++
Sbjct: 468 IDVLDALAKALGFKYEIYQAPDGRYGHQLHNTS---WNGMIGELISKRADLAISAITITP 524
Query: 61 TR 62
R
Sbjct: 525 ER 526
>sp|Q61627|GRID1_MOUSE Glutamate receptor ionotropic, delta-1 OS=Mus musculus GN=Grid1
PE=1 SV=2
Length = 1009
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ L F + +Y DG YG ++ WNG++G+L++ A ++ +A++++
Sbjct: 468 IDVLDALAKALGFKYEIYQAPDGRYGHQLHNTS---WNGMIGELISKRADLAISAITITP 524
Query: 61 TR 62
R
Sbjct: 525 ER 526
>sp|Q9ULK0|GRID1_HUMAN Glutamate receptor ionotropic, delta-1 OS=Homo sapiens GN=GRID1
PE=2 SV=2
Length = 1009
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ L F + +Y DG YG ++ WNG++G+L++ A ++ +A++++
Sbjct: 468 IDVLDALAKALGFKYEIYQAPDGRYGHQLHNTS---WNGMIGELISKRADLAISAITITP 524
Query: 61 TR 62
R
Sbjct: 525 ER 526
>sp|Q00961|NMDE3_RAT Glutamate receptor ionotropic, NMDA 2C OS=Rattus norvegicus
GN=Grin2c PE=1 SV=1
Length = 1237
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ ++F + LY+V +G +G +VR WNG++G++ A M+ +L+++
Sbjct: 459 IDILKKLAKVVKFSYDLYLVTNGKHGKRVR----GVWNGMIGEVYYKRADMAIGSLTINE 514
Query: 61 TR 62
R
Sbjct: 515 ER 516
>sp|Q01098|NMDE3_MOUSE Glutamate receptor ionotropic, NMDA 2C OS=Mus musculus GN=Grin2c
PE=2 SV=2
Length = 1239
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ ++F + LY+V +G +G +VR WNG++G++ A M+ +L+++
Sbjct: 459 IDILKKLAKVVKFSYDLYLVTNGKHGKRVR----GVWNGMIGEVYYKRADMAIGSLTINE 514
Query: 61 TR 62
R
Sbjct: 515 ER 516
>sp|Q01812|GRIK4_RAT Glutamate receptor ionotropic, kainate 4 OS=Rattus norvegicus
GN=Grik4 PE=2 SV=1
Length = 956
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ L F++ + +V DG+YG W G+VG+L+ A ++ A L++++
Sbjct: 449 VDMLKELAEILRFNYKIRLVGDGVYGVP---EANGTWTGMVGELIARKADLAVAGLTITA 505
Query: 61 TR 62
R
Sbjct: 506 ER 507
>sp|Q5IS46|GRIK4_PANTR Glutamate receptor ionotropic, kainate 4 OS=Pan troglodytes
GN=GRIK4 PE=2 SV=1
Length = 956
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ L F++ + +V DG+YG W G+VG+L+ A ++ A L++++
Sbjct: 449 VDMLKELAEILRFNYKIRLVGDGVYGVP---EANGTWTGMVGELIARKADLAVAGLTITA 505
Query: 61 TR 62
R
Sbjct: 506 ER 507
>sp|Q8BMF5|GRIK4_MOUSE Glutamate receptor ionotropic, kainate 4 OS=Mus musculus GN=Grik4
PE=2 SV=2
Length = 956
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ L F++ + +V DG+YG W G+VG+L+ A ++ A L++++
Sbjct: 449 VDMLKELAEILRFNYKIRLVGDGVYGVP---EANGTWTGMVGELIARKADLAVAGLTITA 505
Query: 61 TR 62
R
Sbjct: 506 ER 507
>sp|Q16099|GRIK4_HUMAN Glutamate receptor ionotropic, kainate 4 OS=Homo sapiens GN=GRIK4
PE=2 SV=2
Length = 956
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ L F++ + +V DG+YG W G+VG+L+ A ++ A L++++
Sbjct: 449 VDMLKELAEILRFNYKIRLVGDGVYGVP---EANGTWTGMVGELIARKADLAVAGLTITA 505
Query: 61 TR 62
R
Sbjct: 506 ER 507
>sp|Q91756|GLRK_XENLA Glutamate receptor U1 OS=Xenopus laevis GN=kbp PE=2 SV=1
Length = 479
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+DLL ++Q L F++ + V DG YG K +Q WNG+VG+++ ++ A L++++
Sbjct: 66 IDLLSELSQSLGFNYTIKEVKDGRYGAK---DQDGNWNGMVGEVLRKEVDLAVAPLTITA 122
Query: 61 TR 62
R
Sbjct: 123 NR 124
>sp|Q14957|NMDE3_HUMAN Glutamate receptor ionotropic, NMDA 2C OS=Homo sapiens GN=GRIN2C
PE=2 SV=3
Length = 1233
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +A+ ++F + LY+V +G +G +VR WNG++G++ A M+ +L+++
Sbjct: 459 IDILKKLARVVKFSYDLYLVTNGKHGKRVR----GVWNGMIGEVYYKRADMAIGSLTINE 514
Query: 61 TR 62
R
Sbjct: 515 ER 516
>sp|Q5IS45|NMDE1_PANTR Glutamate receptor ionotropic, NMDA 2A OS=Pan troglodytes GN=GRIN2A
PE=2 SV=1
Length = 1464
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +++ ++F + LY+V +G +G KV + WNG++G++V A M+ +L+++
Sbjct: 461 IDILKKLSRTVKFTYDLYLVTNGKHGKKV----NNVWNGMIGEVVYQRAVMAVGSLTINE 516
Query: 61 TR 62
R
Sbjct: 517 ER 518
>sp|Q12879|NMDE1_HUMAN Glutamate receptor ionotropic, NMDA 2A OS=Homo sapiens GN=GRIN2A
PE=1 SV=1
Length = 1464
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +++ ++F + LY+V +G +G KV + WNG++G++V A M+ +L+++
Sbjct: 461 IDILKKLSRTVKFTYDLYLVTNGKHGKKV----NNVWNGMIGEVVYQRAVMAVGSLTINE 516
Query: 61 TR 62
R
Sbjct: 517 ER 518
>sp|Q00959|NMDE1_RAT Glutamate receptor ionotropic, NMDA 2A OS=Rattus norvegicus
GN=Grin2a PE=1 SV=2
Length = 1464
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +++ ++F + LY+V +G +G KV + WNG++G++V A M+ +L+++
Sbjct: 461 IDILKKLSRTVKFTYDLYLVTNGKHGKKV----NNVWNGMIGEVVYQRAVMAVGSLTINE 516
Query: 61 TR 62
R
Sbjct: 517 ER 518
>sp|P35436|NMDE1_MOUSE Glutamate receptor ionotropic, NMDA 2A OS=Mus musculus GN=Grin2a
PE=1 SV=2
Length = 1464
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Query: 1 MDLLENIAQELEFDFHLYIVADGLYGTKVRENQKDKWNGVVGDLVTGTAHMSFAALSVSS 60
+D+L+ +++ ++F + LY+V +G +G KV + WNG++G++V A M+ +L+++
Sbjct: 461 IDILKKLSRTVKFTYDLYLVTNGKHGKKV----NNVWNGMIGEVVYQRAVMAVGSLTINE 516
Query: 61 TR 62
R
Sbjct: 517 ER 518
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,243,485
Number of Sequences: 539616
Number of extensions: 632523
Number of successful extensions: 1438
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1302
Number of HSP's gapped (non-prelim): 87
length of query: 62
length of database: 191,569,459
effective HSP length: 34
effective length of query: 28
effective length of database: 173,222,515
effective search space: 4850230420
effective search space used: 4850230420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)