RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2316
(69 letters)
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2;
ATP-binding, cholesterol biosynthesis, fatty acid
biosynthesis;kinase, lipid synthesis; 1.85A {Homo
sapiens} PDB: 3aqv_A* 2yza_A*
Length = 276
Score = 105 bits (265), Expect = 3e-30
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ RHP+II +Y+V +VMEY +GGEL+D++ + + E EARR+F+QI +AV
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAV 124
Query: 61 YYCHK 65
YCH+
Sbjct: 125 DYCHR 129
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine
protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3,
ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A*
1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Length = 328
Score = 106 bits (267), Expect = 4e-30
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
M + HPNI+ ++EV E + + L+MEYA+GGE++D+L + E+EAR FRQI +AV
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAV 127
Query: 61 YYCHK 65
YCH+
Sbjct: 128 QYCHQ 132
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase,
PASK, protein kinase, drug discovery, ATP-bindin kinase,
nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Length = 335
Score = 105 bits (265), Expect = 7e-30
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAA-GGELYDFLDQKKVLTEEEARRIFRQIATA 59
+S V H NII + ++FEN+ LVME G +L+ F+D+ L E A IFRQ+ +A
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 60 VYYCHK 65
V Y
Sbjct: 143 VGYLRL 148
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 105 bits (263), Expect = 2e-29
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
S+ H +++ + FE+ + + +V+E L + ++K LTE EAR RQI
Sbjct: 95 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 154
Query: 61 YYCHK 65
Y H+
Sbjct: 155 QYLHR 159
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 103 bits (259), Expect = 4e-29
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
S+ H +++ + FE+ + + +V+E L + ++K LTE EAR RQI
Sbjct: 69 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 128
Query: 61 YYCHK 65
Y H+
Sbjct: 129 QYLHR 133
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 103 bits (259), Expect = 8e-29
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
S+RHPNI+ EV + ++MEYA+GGELY+ + +E+EAR F+Q+ + V
Sbjct: 70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 61 YYCHK 65
YCH
Sbjct: 130 SYCHS 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase,
nucleotide-binding, staurosporine-binding,
serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A
{Rattus norvegicus}
Length = 476
Score = 104 bits (262), Expect = 9e-29
Identities = 28/65 (43%), Positives = 45/65 (69%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ RHP+II +Y+V + +VMEY +GGEL+D++ + L E+E+RR+F+QI + V
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGV 129
Query: 61 YYCHK 65
YCH+
Sbjct: 130 DYCHR 134
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1,
peptide drug, prostate cancer, transferase; HET: ANP;
1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A*
3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A*
2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A*
3cxw_A* 3cy3_A* 2bik_B* ...
Length = 320
Score = 102 bits (255), Expect = 2e-28
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 1 MSSVRH--PNIIHIYEVFENREKMVLVMEYAAG-GELYDFLDQKKVLTEEEARRIFRQIA 57
+ V +I + + FE + VL++E +L+DF+ ++ L EE AR F Q+
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 159
Query: 58 TAVYYCHK 65
AV +CH
Sbjct: 160 EAVRHCHN 167
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 101 bits (253), Expect = 2e-28
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ H N++ Y L +EY +GGEL+D ++ + E +A+R F Q+ V
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 61 YYCHK 65
Y H
Sbjct: 119 VYLHG 123
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A
{Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A
2fh9_A 3mn3_A
Length = 275
Score = 101 bits (253), Expect = 2e-28
Identities = 29/65 (44%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ +RHP+II +Y+V ++++++++V+EYA G EL+D++ Q+ ++E+EARR F+QI +AV
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAV 125
Query: 61 YYCHK 65
YCH+
Sbjct: 126 EYCHR 130
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 100 bits (252), Expect = 5e-28
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ H N++ Y L +EY +GGEL+D ++ + E +A+R F Q+ V
Sbjct: 59 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 61 YYCHK 65
Y H
Sbjct: 119 VYLHG 123
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 99 bits (250), Expect = 6e-28
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
++HP+I+ +Y FE+ + LV+E GE+ +L ++ K +E EAR QI T
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 60 VYYCHK 65
+ Y H
Sbjct: 125 MLYLHS 130
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer,
leukemia, transferase, ATP-binding, proto- oncogene,
phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Length = 312
Score = 100 bits (250), Expect = 8e-28
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 2 SSVRHPNIIHIYEVFENREKMVLVMEYAA-GGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ HP +I + + FE +E +LV+E +L+D++ +K L E +R F Q+ A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 61 YYCHK 65
+CH
Sbjct: 153 QHCHS 157
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3,
ZIP kinase, ZIPK, DAP kinase like kinase, DLK,
structural genomics consortium; HET: 7CP; 1.24A {Homo
sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A*
3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A*
3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A*
3dgk_A ...
Length = 283
Score = 98.8 bits (247), Expect = 2e-27
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ +RHPNII ++++FEN+ +VL++E +GGEL+DFL +K+ LTE+EA + +QI V
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 61 YYCHK 65
+Y H
Sbjct: 122 HYLHS 126
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding,
nucleotide-binding, phosphoprotei
serine/threonine-protein kinase, transferase; 2.80A
{Schizosaccharomyces pombe}
Length = 336
Score = 98.1 bits (245), Expect = 7e-27
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ +RHP+II +Y+V +V+V+EYA GGEL+D++ +KK +TE+E RR F+QI A+
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 61 YYCHK 65
YCH+
Sbjct: 122 EYCHR 126
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit;
HET: MES; 2.60A {Homo sapiens}
Length = 326
Score = 97.3 bits (243), Expect = 1e-26
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ ++HPN+I ++EV+EN+ ++L++E AGGEL+DFL +K+ LTEEEA +QI V
Sbjct: 68 LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 61 YYCHK 65
YY H
Sbjct: 128 YYLHS 132
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 95.7 bits (239), Expect = 2e-26
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
S +RHPNI+ +Y F +R+++ L++E+A GELY L + E+ + ++A A+
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 61 YYCHK 65
+YCH+
Sbjct: 128 HYCHE 132
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 96.7 bits (241), Expect = 2e-26
Identities = 7/72 (9%), Positives = 27/72 (37%), Gaps = 8/72 (11%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--------DQKKVLTEEEARRI 52
++ +++ + + N +++ ++ EY + F + + + + I
Sbjct: 97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156
Query: 53 FRQIATAVYYCH 64
+ + + Y H
Sbjct: 157 IKSVLNSFSYIH 168
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 95.7 bits (239), Expect = 2e-26
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
S +RHPNI+ +Y F + ++ L++EYA G +Y L + E+ ++A A+
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 61 YYCHK 65
YCH
Sbjct: 123 SYCHS 127
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase;
1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A
2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Length = 321
Score = 96.2 bits (240), Expect = 3e-26
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ V H N+I +++V+ENR +VL++E +GGEL+DFL QK+ L+EEEA +QI V
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 61 YYCHK 65
Y H
Sbjct: 129 NYLHT 133
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4
calmodulin like EF...; calcium dependent protein kinase;
HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II}
PDB: 2qg5_A*
Length = 277
Score = 95.4 bits (238), Expect = 3e-26
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
M S+ HPNII +YE FE+ + LVME GGEL++ + K+V E +A RI + + +AV
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAV 119
Query: 61 YYCHK 65
YCHK
Sbjct: 120 AYCHK 124
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET:
AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Length = 361
Score = 95.9 bits (239), Expect = 7e-26
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ V HPNII +++V+ENR +VL++E +GGEL+DFL QK+ L+EEEA +QI V
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 61 YYCHK 65
Y H
Sbjct: 129 NYLHT 133
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: SEP BX7;
1.80A {Homo sapiens}
Length = 319
Score = 94.4 bits (235), Expect = 1e-25
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 1 MSSVRHPNIIHIYEVFENREK--MVLVMEYAAGGELYDFLDQKK---VLTEEEARRIFRQ 55
+ + H NI+ ++ + E VL+ME+ G LY L++ L E E + R
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 56 IATAVYYCHK 65
+ + + +
Sbjct: 121 VVGGMNHLRE 130
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase,
kinase, membrane, ATP-binding, prenylation,
serine/threonine-protein kinase, alternative splicing;
HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Length = 304
Score = 93.8 bits (234), Expect = 2e-25
Identities = 21/65 (32%), Positives = 43/65 (66%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ ++H NI+ + +++E+ LVM+ +GGEL+D + ++ V TE++A + +Q+ +AV
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119
Query: 61 YYCHK 65
Y H+
Sbjct: 120 KYLHE 124
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 93.0 bits (232), Expect = 2e-25
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
++HPNI+ +++ + LV + GGEL++ + ++ +E +A +QI ++
Sbjct: 59 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 61 YYCHK 65
YCH
Sbjct: 119 AYCHS 123
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation,
transferase-transferas inhibitor complex; HET: BX7;
2.60A {Homo sapiens}
Length = 396
Score = 93.8 bits (233), Expect = 5e-25
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 1 MSSVRHPNIIHIYEVFE--NREKMVLVMEYAAGGELYDFLDQKK---VLTEEEARRIFRQ 55
+ + H NI+ ++ + E VL+ME+ G LY L++ L E E + R
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 56 IATAVYYCHK 65
+ + + +
Sbjct: 121 VVGGMNHLRE 130
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer,
transferase, serine/threonine-protein kinase,
nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Length = 373
Score = 93.2 bits (232), Expect = 6e-25
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYD-FLDQKKVLTEEEARRIFRQIATA 59
M+ + H N+I +Y+ FE++ +VLVMEY GGEL+D +D+ LTE + +QI
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEG 199
Query: 60 VYYCHK 65
+ + H+
Sbjct: 200 IRHMHQ 205
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics,
parasitology, structural genomics consortium, SGC,
ATP-binding, nucleotide-binding; HET: ANP; 2.55A
{Toxoplasma gondii}
Length = 285
Score = 91.5 bits (228), Expect = 9e-25
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL----DQKKVLTEEEARRIFRQI 56
+ S+ HPNII I+EVFE+ M +VME GGEL + + + K L+E + +Q+
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 57 ATAVYYCHK 65
A+ Y H
Sbjct: 134 MNALAYFHS 142
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 92.8 bits (231), Expect = 1e-24
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
++HPNI+ +++ + LV + GGEL++ + ++ +E +A +QI ++
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 141
Query: 61 YYCHK 65
YCH
Sbjct: 142 AYCHS 146
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase,
serine/threonine-protein, ATP-binding,
calmodulin-binding; HET: ATP; 2.20A {Oryctolagus
cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Length = 298
Score = 91.2 bits (227), Expect = 2e-24
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 6 HPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYCHK 65
HPNII + + +E LV + GEL+D+L +K L+E+E R+I R + + HK
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding,
serine/threonine-protein kinase, CGD3_920, transferase;
HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB:
3dfa_A 3ma6_A*
Length = 287
Score = 90.8 bits (226), Expect = 2e-24
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + HPNI+ ++E+ E+ +V E GGEL+D + ++K +E +A RI +Q+ + +
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 61 YYCHK 65
Y HK
Sbjct: 135 TYMHK 139
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation,
kinase domain ubiquitin-like domain, kinase, substrate
binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Length = 676
Score = 92.8 bits (230), Expect = 2e-24
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 1 MSSVRHPNIIHIYEVFENREKM------VLVMEYAAGGELYDFLDQKK---VLTEEEARR 51
M + HPN++ EV + +K+ +L MEY GG+L +L+Q + L E R
Sbjct: 66 MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125
Query: 52 IFRQIATAVYYCHK 65
+ I++A+ Y H+
Sbjct: 126 LLSDISSALRYLHE 139
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV;
calmodulin-binding, nucleotide-binding,
serine/threonine-protein kinase, ATP-binding; HET: DKI;
2.17A {Homo sapiens}
Length = 349
Score = 91.6 bits (228), Expect = 2e-24
Identities = 25/65 (38%), Positives = 39/65 (60%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + HPNII + E+FE ++ LV+E GGEL+D + +K +E +A +QI AV
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAV 161
Query: 61 YYCHK 65
Y H+
Sbjct: 162 AYLHE 166
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer,
anticancer drug design; HET: YCF; 1.77A {Homo sapiens}
PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A*
2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A*
2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Length = 322
Score = 91.2 bits (227), Expect = 2e-24
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + HP II I F+ E +V+E GGEL+D + K L E + F Q+ AV
Sbjct: 69 LKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 61 YYCHK 65
Y H+
Sbjct: 128 QYLHE 132
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform;
transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A
1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A
1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Length = 365
Score = 91.3 bits (227), Expect = 4e-24
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 6 HPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYCHK 65
HP+II + + +E+ M LV + GEL+D+L +K L+E+E R I R + AV + H
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHA 218
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding
protein complex, transferase metal protein complex,
nucleus; HET: ANP; 2.65A {Homo sapiens}
Length = 305
Score = 90.4 bits (225), Expect = 4e-24
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 1 MSSVRHPNIIHIYEV--FENREKMVLVMEYAAGG--ELYDFLDQKKVLTEEEARRIFRQI 56
+ +RH N+I + +V E ++KM +VMEY G E+ D + +K+ +A F Q+
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR-FPVCQAHGYFCQL 118
Query: 57 ATAVYYCHK 65
+ Y H
Sbjct: 119 IDGLEYLHS 127
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase,
FHA domain, ATP-binding, cell cycle, mutation,
LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens}
PDB: 3i6w_A
Length = 419
Score = 91.3 bits (227), Expect = 5e-24
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + HP II I F+ E +V+E GGEL+D + K L E + F Q+ AV
Sbjct: 194 LKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 252
Query: 61 YYCHK 65
Y H+
Sbjct: 253 QYLHE 257
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens}
SCOP: d.144.1.7
Length = 321
Score = 90.0 bits (224), Expect = 6e-24
Identities = 18/66 (27%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATA 59
++ RH NI+H++E FE+ E++V++ E+ +G ++++ ++ L E E Q+ A
Sbjct: 55 LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEA 114
Query: 60 VYYCHK 65
+ + H
Sbjct: 115 LQFLHS 120
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia
californica} SCOP: d.144.1.7
Length = 387
Score = 90.5 bits (225), Expect = 9e-24
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M+ + HP +I++++ FE++ +MVL++E+ +GGEL+D + + ++E E RQ
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Query: 60 VYYCHK 65
+ + H+
Sbjct: 162 LKHMHE 167
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33;
2.40A {Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 91.1 bits (226), Expect = 1e-23
Identities = 21/66 (31%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
MS +RHP ++++++ FE+ +MV++ E+ +GGEL++ + D+ ++E+EA RQ+
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267
Query: 60 VYYCHK 65
+ + H+
Sbjct: 268 LCHMHE 273
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 90.5 bits (225), Expect = 1e-23
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ S+ HPNII +++VFE+++ LV E+ GGEL++ + + E +A I +QI + +
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGI 159
Query: 61 YYCHK 65
Y HK
Sbjct: 160 CYLHK 164
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2,
autoinhibitory, ATP-binding, nucleotide phosphorylation,
serine/threonine-protein kinase; 2.00A {Mus musculus}
PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Length = 342
Score = 89.3 bits (222), Expect = 1e-23
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 4 VRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYC 63
+HPNII + +V+++ + + +V E GGEL D + ++K +E EA + I V Y
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 64 HK 65
H
Sbjct: 133 HA 134
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, bumped
kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium
parvum} PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 89.7 bits (223), Expect = 2e-23
Identities = 22/65 (33%), Positives = 40/65 (61%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + HPNI+ ++E+ E+ +V E GGEL+D + ++K +E +A RI +Q+ + +
Sbjct: 75 LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 61 YYCHK 65
Y HK
Sbjct: 135 TYMHK 139
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein
kinase, transferase, calcium-bindin binding, EF hand,
bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma
gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A*
3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A*
3v5t_A* 3ku2_A* 3hx4_A*
Length = 484
Score = 89.8 bits (223), Expect = 2e-23
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + HPNI+ +YE FE++ LV E GGEL+D + +K +E +A RI RQ+ + +
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 61 YYCHK 65
Y HK
Sbjct: 140 TYMHK 144
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2,
E.C.2.7.11.17, phosphorylation, AMPKK, metabolism,
binding, calmodulin-binding; HET: 609; 2.40A {Homo
sapiens}
Length = 298
Score = 88.1 bits (219), Expect = 3e-23
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 1 MSSVRHPNIIHIYEVFE--NREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIAT 58
+ + HPN++ + EV + N + + +V E G + + K L+E++AR F+ +
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQARFYFQDLIK 148
Query: 59 AVYYCHK 65
+ Y H
Sbjct: 149 GIEYLHY 155
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain
and 4 calmodulin...; transferase, calcium dependent
protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum}
PDB: 3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 89.0 bits (221), Expect = 4e-23
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + HPNI+ +Y+ FE++ LVME GGEL+D + + E +A I +Q+ + V
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGV 149
Query: 61 YYCHK 65
Y HK
Sbjct: 150 TYLHK 154
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine
kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing
protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB:
3lm0_A*
Length = 327
Score = 88.1 bits (219), Expect = 4e-23
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 1 MSSVRH-PNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIFRQIA 57
+ + P +I+++EV+EN +++L++EYAAGGE++ + ++E + R+ +QI
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL 141
Query: 58 TAVYYCHK 65
VYY H+
Sbjct: 142 EGVYYLHQ 149
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif,
transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A*
2hw6_A
Length = 316
Score = 87.3 bits (217), Expect = 6e-23
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 6 HPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYCHK 65
H N++ + E FE ++ LV E GG + + +++ E EA + + +A+A+ + H
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 88.5 bits (220), Expect = 7e-23
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
++HPNI+ +++ L+ + GGEL++ + ++ +E +A +QI AV
Sbjct: 64 CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 123
Query: 61 YYCHK 65
+CH+
Sbjct: 124 LHCHQ 128
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin
dependent protein kinase, Mg synaptic plasticity,
pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB:
3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Length = 351
Score = 87.0 bits (216), Expect = 1e-22
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKK----VLTEEEARRIFRQI 56
++HP+I+ + E + + + +V E+ G +L + ++ V +E A RQI
Sbjct: 80 CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 57 ATAVYYCHK 65
A+ YCH
Sbjct: 140 LEALRYCHD 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK,
ATP-binding, metal-binding, NUCL binding,
serine/threonine-protein kinase, transferase; 2.00A
{Homo sapiens} PDB: 3kn5_A
Length = 325
Score = 86.2 bits (214), Expect = 2e-22
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 6 HPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYCHK 65
HPNI+ ++EVF ++ LVME GGEL++ + +KK +E EA I R++ +AV + H
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros
picked threonine kinase, SGC, structural genomics
consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB:
3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Length = 313
Score = 85.1 bits (211), Expect = 4e-22
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 1 MSSVRHPN--IIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIAT 58
++ ++ + II +Y+ + + +VME +L +L +KK + E + ++ +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLE 138
Query: 59 AVYYCHK 65
AV+ H+
Sbjct: 139 AVHTIHQ 145
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase
activation, phosphorylation, ATP- binding,
nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Length = 343
Score = 84.0 bits (208), Expect = 2e-21
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 1 MSSVRHPN--IIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIAT 58
++ ++ + II +Y+ + + +VME +L +L +KK + E + ++ +
Sbjct: 61 LNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLE 119
Query: 59 AVYYCHK 65
AV+ H+
Sbjct: 120 AVHTIHQ 126
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding,
nucleotide-bindi phosphoprotein,
serine/threonine-protein kinase; HET: 537 7PE; 2.88A
{Homo sapiens} PDB: 2zmc_A*
Length = 390
Score = 84.1 bits (208), Expect = 2e-21
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 1 MSSVRHPN--IIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIAT 58
++ ++ + II +Y+ + + +VME +L +L +KK + E + ++ +
Sbjct: 108 LNKLQQHSDKIIRLYDYEITDQYIYMVMECG-NIDLNSWLKKKKSIDPWERKSYWKNMLE 166
Query: 59 AVYYCHK 65
AV+ H+
Sbjct: 167 AVHTIHQ 173
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal
transduction, acid starvation, starvation stress
response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A*
1zyd_A* 1zyc_A* 1zxe_A
Length = 303
Score = 82.0 bits (203), Expect = 6e-21
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 14/79 (17%)
Query: 1 MSSVRHPNIIHIYEVFENRE-------------KMVLVMEYAAGGELYDFLDQKKVLTEE 47
++S+ H ++ Y + R + + MEY G LYD + + + +
Sbjct: 56 LASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR 115
Query: 48 -EARRIFRQIATAVYYCHK 65
E R+FRQI A+ Y H
Sbjct: 116 DEYWRLFRQILEALSYIHS 134
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 81.6 bits (202), Expect = 8e-21
Identities = 13/73 (17%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 1 MSSVRHPNIIHIYEVFENRE----KMVLVMEYAAGGELYDFLDQKKV----LTEEEARRI 52
HPNI+ + + L++ + G L++ +++ K LTE++ +
Sbjct: 80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139
Query: 53 FRQIATAVYYCHK 65
I + H
Sbjct: 140 LLGICRGLEAIHA 152
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor,
spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis
compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB:
3kga_A* 3m42_A*
Length = 299
Score = 78.9 bits (195), Expect = 7e-20
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 6 HPNIIHIYEVFEN----REKMVLVMEYAAGGELYDFLDQK--KVLTEEEARRIFRQIATA 59
P+I+ I +V+EN R+ +++VME GGEL+ + + + TE EA I + I A
Sbjct: 70 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 60 VYYCHK 65
+ Y H
Sbjct: 130 IQYLHS 135
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 79.0 bits (195), Expect = 9e-20
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKK--VLTEEEARRIFRQIAT 58
+++++HPNI+ E FE + +VM+Y GG+L+ ++ +K + E++ F QI
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL 136
Query: 59 AVYYCHK 65
A+ + H
Sbjct: 137 ALKHVHD 143
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation,
staurosporine, transfe; HET: STU; 2.70A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Length = 400
Score = 78.6 bits (194), Expect = 2e-19
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 6 HPNIIHIYEVFEN----REKMVLVMEYAAGGELYDFLDQK--KVLTEEEARRIFRQIATA 59
P+I+ I +V+EN R+ +++VME GGEL+ + + + TE EA I + I A
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 60 VYYCHK 65
+ Y H
Sbjct: 174 IQYLHS 179
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 77.3 bits (191), Expect = 3e-19
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVL--VMEYAAGGELYDFLDQ----KKVLTEEEARRIFR 54
+ ++HPNI+ Y+ +R L VMEY GG+L + + ++ L EE R+
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 55 QIATAVYYCHK 65
Q+ A+ CH+
Sbjct: 119 QLTLALKECHR 129
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo
sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X*
3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A*
3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Length = 336
Score = 77.4 bits (191), Expect = 4e-19
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 6 HPNIIHIYEVFENREKMV----LVMEYAAGGELYDFLDQK--KVLTEEEARRIFRQIATA 59
P+I+ I +V+EN ++ME GGEL+ + ++ + TE EA I R I TA
Sbjct: 81 GPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTA 140
Query: 60 VYYCHK 65
+ + H
Sbjct: 141 IQFLHS 146
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2
calmodulin-like EF...; structural genomics, protist
parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa
II}
Length = 345
Score = 74.5 bits (183), Expect = 5e-18
Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 40/105 (38%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKK------------------ 42
M + HPNI +YEV+E+ + + LVME GG L D L+
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 43 ----------------------VLTEEEARRIFRQIATAVYYCHK 65
V E+ I RQI +A++Y H
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 72.3 bits (178), Expect = 2e-17
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL----DQKKVLTEEEARRIFRQI 56
+ + HPN+I Y F ++ +V+E A G+L + QK+++ E + F Q+
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 57 ATAVYYCHK 65
+A+ + H
Sbjct: 146 CSALEHMHS 154
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1;
protein-nucleotide complex, ATP-binding, endoplasmic
reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces
cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A*
3sdj_A*
Length = 434
Score = 72.9 bits (179), Expect = 2e-17
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 8/70 (11%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-------LTEEEARRIFRQ 55
S HPN+I Y + + +E L D ++ K V E + RQ
Sbjct: 65 SDDHPNVIRYYCSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 56 IATAVYYCHK 65
IA+ V + H
Sbjct: 124 IASGVAHLHS 133
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 71.2 bits (175), Expect = 4e-17
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 18/83 (21%)
Query: 1 MSSVRHPNIIHIYEVFENREKMV----------------LVMEYAAGGELYDFLDQKK-- 42
++ + H NI+H ++ + + ME+ G L ++++++
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 43 VLTEEEARRIFRQIATAVYYCHK 65
L + A +F QI V Y H
Sbjct: 118 KLDKVLALELFEQITKGVDYIHS 140
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 71.2 bits (174), Expect = 9e-17
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 5/70 (7%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKK-----VLTEEEARRIFRQ 55
+ + Y + VLV E + G L + ++ K V+ + +
Sbjct: 121 LKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180
Query: 56 IATAVYYCHK 65
+ + H
Sbjct: 181 MLYMIEQVHD 190
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain,
kinase and RNAse function, ATP binding ssRNA
dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo
sapiens}
Length = 432
Score = 70.6 bits (173), Expect = 2e-16
Identities = 13/64 (20%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATAVY 61
S HPN+I + ++R+ + +E L ++++QK E + +Q + +
Sbjct: 74 SDEHPNVIRYFCTEKDRQFQYIAIEL-CAATLQEYVEQKDFAHLGLEPITLLQQTTSGLA 132
Query: 62 YCHK 65
+ H
Sbjct: 133 HLHS 136
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci
inhibitory kinase; structural genomics, structural
genomics consortium, SGC; 1.70A {Homo sapiens}
Length = 311
Score = 69.7 bits (171), Expect = 2e-16
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
+HP + + + +E + L E G L L E + R A
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRDTLLA 169
Query: 60 VYYCHK 65
+ + H
Sbjct: 170 LAHLHS 175
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase,
serine/threonine kinase, cyclin clathrine, membrane
trafficking, structural genomics; 2.10A {Homo sapiens}
Length = 337
Score = 69.0 bits (169), Expect = 5e-16
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 5 RHPNIIHIY-------EVFENREKMVLVMEYAAGGELYDFLDQ---KKVLTEEEARRIFR 54
HPNI+ E + + L++ G+L +FL + + L+ + +IF
Sbjct: 84 GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFY 143
Query: 55 QIATAVYYCHK 65
Q AV + H+
Sbjct: 144 QTCRAVQHMHR 154
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant,
catalytic domain, synthetic inhibitor, TRAN transferase
inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB:
4g34_A*
Length = 299
Score = 67.0 bits (164), Expect = 2e-15
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 15/80 (18%)
Query: 1 MSSVRHPNIIHIYEVFENREKMV------------LVMEYAAGGELYDFLDQKKVLTEEE 48
++ + HP I+ + + + + M+ L D+++ + + E E
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 49 ---ARRIFRQIATAVYYCHK 65
IF QIA AV + H
Sbjct: 117 RSVCLHIFLQIAEAVEFLHS 136
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET:
824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A*
3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Length = 289
Score = 63.9 bits (156), Expect = 3e-14
Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKK----VLTEEEARRIFRQIATAV 60
+H +++ + + + M++ EY GG L D + + E E + + Q+ +
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 61 YYCHK 65
Y H
Sbjct: 129 RYIHS 133
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 60.4 bits (147), Expect = 4e-13
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ ++HPNII + V + LVME+A GG L L K + + QIA +
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVL-SGKRIPPDILVNWAVQIARGM 118
Query: 61 YYCH 64
Y H
Sbjct: 119 NYLH 122
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 60.1 bits (146), Expect = 8e-13
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
RH N++ + + ++ G LY + D K VL + R+I ++I
Sbjct: 83 YRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKG 142
Query: 60 VYYCH 64
+ Y H
Sbjct: 143 MGYLH 147
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding,
serine/threonine-protein kinase, transferase; 1.85A
{Giardia lamblia} PDB: 3gc0_A*
Length = 329
Score = 57.6 bits (140), Expect = 5e-12
Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYCH 64
+H NII + V + ++ L+ EYA +L ++D+ ++ + Q+ V +CH
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 65 K 65
Sbjct: 150 S 150
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 57.3 bits (139), Expect = 6e-12
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
MS++ HPNI+ +Y + +VME+ G+LY L D+ + R+ IA
Sbjct: 77 MSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 60 VYYCH 64
+ Y
Sbjct: 135 IEYMQ 139
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase,
phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus
musculus}
Length = 332
Score = 56.4 bits (136), Expect = 1e-11
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEE---ARRIFRQIA 57
M N + + + + + M+ L D+++++ L + E IF QIA
Sbjct: 115 MDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIA 174
Query: 58 TAVYYCHK 65
AV + H
Sbjct: 175 EAVEFLHS 182
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 56.2 bits (136), Expect = 2e-11
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL---DQKKVLTEEEARRIFRQIA 57
M +RHPNI+ + +V EY + G LY L ++ L E + +A
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 58 TAVYYCHK 65
+ Y H
Sbjct: 148 KGMNYLHN 155
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus
subsp}
Length = 294
Score = 56.1 bits (136), Expect = 2e-11
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
S + H NI+ + +V E + LVMEY G L ++++ L+ + A QI +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 61 YYCHK 65
+ H
Sbjct: 125 KHAHD 129
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 55.8 bits (135), Expect = 2e-11
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M + HPN++ V +++ + EY GG L + + + IA+
Sbjct: 61 MRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASG 120
Query: 60 VYYCHK 65
+ Y H
Sbjct: 121 MAYLHS 126
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 55.0 bits (133), Expect = 5e-11
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV---LTEEEARRIFRQIA 57
+S V HPNI+ +Y + LVMEYA GG LY+ L + T A Q +
Sbjct: 55 LSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 58 TAVYYCH 64
V Y H
Sbjct: 113 QGVAYLH 119
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET:
D15; 2.40A {Homo sapiens}
Length = 311
Score = 54.9 bits (133), Expect = 5e-11
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQ-KKVLTEEEARRIFRQIATAVYYC 63
+HPN++++ EVF + ++ LV EY + LD+ ++ + E + I Q AV +C
Sbjct: 60 KHPNLVNLLEVFRRKRRLHLVFEYCD-HTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 64 HK 65
HK
Sbjct: 119 HK 120
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 54.7 bits (132), Expect = 6e-11
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 1 MSSVRHPNIIHIYEVF----ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+ ++HPNI+ Y+ + + ++ +VLV E G L +L + KV+ + R RQI
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQI 138
Query: 57 ATAVYYCH 64
+ + H
Sbjct: 139 LKGLQFLH 146
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET:
DKI; 1.53A {Homo sapiens}
Length = 331
Score = 54.5 bits (132), Expect = 7e-11
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATAVYYC 63
RH N++++ EV + +++ LV E+ + D L+ L + ++ QI + +C
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVD-HTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 64 HK 65
H
Sbjct: 141 HS 142
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A
{Mycobacterium tuberculosis}
Length = 309
Score = 53.4 bits (129), Expect = 2e-10
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
++ P+++ I++ E ++ + M G +L L ++ L A I RQI +A+
Sbjct: 90 RLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDA 149
Query: 63 CHK 65
H
Sbjct: 150 AHA 152
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 53.5 bits (129), Expect = 2e-10
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
+ RH NI+ ++ + +V ++ G LY L Q+ + I RQ A
Sbjct: 86 LRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQG 144
Query: 60 VYYCH 64
+ Y H
Sbjct: 145 MDYLH 149
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 53.2 bits (128), Expect = 2e-10
Identities = 15/64 (23%), Positives = 24/64 (37%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + P I+ +Y + + ME GG L + Q L E+ A Q +
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL 163
Query: 61 YYCH 64
Y H
Sbjct: 164 EYLH 167
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural
genomics consortium, TBSG domain, signal transduction;
HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB:
3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A*
3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Length = 311
Score = 53.0 bits (128), Expect = 2e-10
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 6 HPNIIHIYEVFENREKMV----LVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVY 61
HP I+ +Y+ E +VMEY G L D + + +T + A + A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130
Query: 62 YCHK 65
+ H+
Sbjct: 131 FSHQ 134
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 53.1 bits (128), Expect = 2e-10
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 1 MSSVRHPNIIHIY----EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+RH NI+ + ++ L+ Y G LYD+L Q L RI I
Sbjct: 56 TVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSI 114
Query: 57 ATAVYYCH 64
A+ + + H
Sbjct: 115 ASGLAHLH 122
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 53.0 bits (128), Expect = 2e-10
Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 1 MSSVRHPNIIHIYEVFEN--REKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQI 56
+ HPN++ + ++ L+ + G LY+ L V+ + +A + +
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 57 ATAVYYCH 64
A + + H
Sbjct: 121 ARGMAFLH 128
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 52.3 bits (126), Expect = 4e-10
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
M + +P I+ + + E E +LVME A G L +L Q + + ++ + Q++ +
Sbjct: 72 MQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGM 130
Query: 61 YY 62
Y
Sbjct: 131 KY 132
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 52.3 bits (126), Expect = 4e-10
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+S P + Y + K+ ++MEY GG D L + L E + I R+I +
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGL 132
Query: 61 YYCHK 65
Y H
Sbjct: 133 DYLHS 137
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition,
kinase-INH complex, rubredoxin fold, TPR domain,
transferase; HET: AXX; 2.40A {Mycobacterium
tuberculosis}
Length = 681
Score = 52.6 bits (126), Expect = 4e-10
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 7/69 (10%)
Query: 1 MSSVRHPNIIHIYEVFENREKMV-----LVMEYAAGGELYDFLDQKKVLTEEEARRIFRQ 55
++ V HP+I+ I+ E+ ++ +VMEY G L QK L EA +
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK--LPVAEAIAYLLE 190
Query: 56 IATAVYYCH 64
I A+ Y H
Sbjct: 191 ILPALSYLH 199
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 52.1 bits (125), Expect = 4e-10
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+S + P + + +V R ++V E+ GG L + D + A R + +A A
Sbjct: 85 LSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAA 142
Query: 61 YYCH 64
H
Sbjct: 143 DAAH 146
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase,
serine/threonine-protein kinase, ATP-binding,
phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP:
d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Length = 288
Score = 51.7 bits (125), Expect = 5e-10
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATAVYYC 63
+H NI+ +Y+V ++++VLV E+ +L LD + L A+ Q+ + YC
Sbjct: 58 KHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 64 HK 65
H
Sbjct: 117 HD 118
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 51.6 bits (124), Expect = 6e-10
Identities = 14/66 (21%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQ-KKVLTEEEARRIFRQIATA 59
+++ HP I+ + + + K+ +++E+ GG + + + + LTE + + + RQ+ A
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEA 129
Query: 60 VYYCHK 65
+ + H
Sbjct: 130 LNFLHS 135
>3niz_A Rhodanese family protein; structural genomics, structural genomics
consortium, SGC, phosphotransferase, cyclin dependent
kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB:
2qkr_A*
Length = 311
Score = 51.8 bits (125), Expect = 7e-10
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATAVYYC 63
HPNI+ + +V + + LV E+ +L LD+ K L + + + Q+ V +C
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 64 HK 65
H+
Sbjct: 136 HQ 137
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 51.5 bits (124), Expect = 7e-10
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
+ RH NI+ ++ +V ++ G LY L + ++ I RQ A
Sbjct: 74 LRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARG 132
Query: 60 VYYCH 64
+ Y H
Sbjct: 133 MDYLH 137
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase,
cell cycle, inhibition, cyclin-dependent kinase, cancer,
ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A*
2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A*
1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A*
1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Length = 299
Score = 51.4 bits (124), Expect = 8e-10
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIFRQIATAVYY 62
HPNI+ + +V K+ LV E+ +L F+D + + + Q+ + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 63 CHK 65
CH
Sbjct: 119 CHS 121
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural
genomics, structural consortium, SGC, transferase; HET:
FEF; 2.40A {Homo sapiens}
Length = 324
Score = 51.4 bits (124), Expect = 9e-10
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATAVYYC 63
+H NI+ ++++ + + LV EY +L +LD + + Q+ + YC
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 64 HK 65
H+
Sbjct: 117 HR 118
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase
inhibitor complex, transferase-transferase activator
complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A*
1ung_A* 1unl_A* 1h4l_A
Length = 292
Score = 51.4 bits (124), Expect = 9e-10
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATAVYYC 63
+H NI+ +++V + +K+ LV E+ +L + D L E + Q+ + +C
Sbjct: 59 KHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 64 HK 65
H
Sbjct: 118 HS 119
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 51.3 bits (123), Expect = 9e-10
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 1 MSSVRHPNIIHIY----EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+RH NI+ + ++ LV +Y G L+D+L + +T E ++
Sbjct: 90 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALST 148
Query: 57 ATAVYYCH 64
A+ + + H
Sbjct: 149 ASGLAHLH 156
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation,
protein-protein interaction, PR kinase, cell cycle,
transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP:
d.144.1.7
Length = 346
Score = 51.0 bits (123), Expect = 1e-09
Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQIATAVYYC 63
HPNII + + F ++ + LV ++ +L + + LT + + Y
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 64 HK 65
H+
Sbjct: 129 HQ 130
>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB,
inhibitor, LY333531, diabetes, cancer, transferase,
serine/threonine-protein kinase; HET: SEP LY4; 1.7A
{Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A*
1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A*
3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A*
3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ...
Length = 310
Score = 50.7 bits (122), Expect = 2e-09
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
MS + HP + +Y F++ EK+ + YA GEL ++ + E R +I +A+
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 143
Query: 61 YYCHK 65
Y H
Sbjct: 144 EYLHG 148
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 50.7 bits (121), Expect = 2e-09
Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQ--KKVLTEEEARRIFRQIAT 58
HPNI+ F ++ +V + A G D + + E I + +
Sbjct: 80 SKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLK 139
Query: 59 AVYYCHK 65
A+ Y H
Sbjct: 140 ALDYIHH 146
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 50.5 bits (121), Expect = 2e-09
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 1 MSSVRHPNIIHIY----EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+RH NI+ + ++ LV +Y G L+D+L + +T E ++
Sbjct: 51 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALST 109
Query: 57 ATAVYYCH 64
A+ + + H
Sbjct: 110 ASGLAHLH 117
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 50.3 bits (121), Expect = 2e-09
Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M+SV +P++ + + + L+ + G L D++ + K + + QIA
Sbjct: 71 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 60 VYY 62
+ Y
Sbjct: 130 MNY 132
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition,
allosteric inhibitor, kinase inhibitor hydrophobic
collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB:
3o96_A*
Length = 446
Score = 50.1 bits (120), Expect = 2e-09
Identities = 22/68 (32%), Positives = 41/68 (60%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + RHP + + F+ +++ VMEYA GGEL+ L +++V +E+ AR +I +A+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 261
Query: 61 YYCHKVQD 68
Y H ++
Sbjct: 262 DYLHSEKN 269
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics,
structural genomics consortium, SGC; 1.80A {Toxoplasma
gondii} PDB: 2w1z_A
Length = 377
Score = 50.4 bits (120), Expect = 2e-09
Identities = 7/68 (10%), Positives = 16/68 (23%), Gaps = 8/68 (11%)
Query: 6 HPNIIHIYEVFENREKM--VLVMEYAA------GGELYDFLDQKKVLTEEEARRIFRQIA 57
+I + + + + G L K L ++ Q+
Sbjct: 157 KKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVI 216
Query: 58 TAVYYCHK 65
+ H
Sbjct: 217 RLLASLHH 224
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 50.1 bits (120), Expect = 3e-09
Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 1 MSSVRHPNIIHIY----EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+RH NI+ + + ++ L+ +Y G LYD+L + L + ++
Sbjct: 85 TVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSS 143
Query: 57 ATAVYYCH 64
+ + + H
Sbjct: 144 VSGLCHLH 151
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 50.0 bits (120), Expect = 3e-09
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
M ++PNI++ + + +++ +VMEY AGG L D + + + E + + R+ A+
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQAL 129
Query: 61 YYCHK 65
+ H
Sbjct: 130 EFLHS 134
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU;
CAMP-dependent protein kinase,catalytic mechanism, ATP
hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A
{Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E*
1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A*
1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A*
3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Length = 350
Score = 49.6 bits (119), Expect = 3e-09
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ +V P ++ + F++ + +VMEY AGGE++ L + +E AR QI
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 61 YYCHK 65
Y H
Sbjct: 155 EYLHS 159
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 49.7 bits (119), Expect = 3e-09
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQ-KKVLTEEEARRIFRQIATA 59
M P+++ Y + + +VMEY G + D + K LTE+E I +
Sbjct: 78 MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 60 VYYCHK 65
+ Y H
Sbjct: 138 LEYLHF 143
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 49.7 bits (119), Expect = 4e-09
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
M +H N++ +Y+ + E++ ++ME+ GG L D + Q + L EE+ + + A+
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR-LNEEQIATVCEAVLQAL 154
Query: 61 YYCHK 65
Y H
Sbjct: 155 AYLHA 159
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 49.4 bits (118), Expect = 4e-09
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIAT 58
M ++HPN++ + V ++ E+ G L D+L ++ ++ + QI++
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 59 AVYY 62
A+ Y
Sbjct: 330 AMEY 333
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 49.2 bits (118), Expect = 5e-09
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
+ HPNI+ + V ++ + +VME GG+ FL + L + ++ A
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAG 225
Query: 60 VYYCHK 65
+ Y
Sbjct: 226 MEYLES 231
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 48.8 bits (117), Expect = 7e-09
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M + +P I+ + V + E ++LVME A GG L+ FL +++ + + Q++
Sbjct: 64 MHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 122
Query: 60 VYY 62
+ Y
Sbjct: 123 MKY 125
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 48.8 bits (117), Expect = 7e-09
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
MS + H +++ Y V ++ +LV E+ G L +L K + + +Q+A A
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAA 125
Query: 60 VYY 62
+++
Sbjct: 126 MHF 128
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics,
structural genomics consortium, SGC, TR; HET: STU; 2.29A
{Homo sapiens}
Length = 384
Score = 48.9 bits (117), Expect = 7e-09
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
M + HP +++++ F++ E M +V++ GG+L L Q EE + ++ A+
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMAL 128
Query: 61 YYCHK 65
Y
Sbjct: 129 DYLQN 133
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 48.7 bits (117), Expect = 8e-09
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M + HP ++ +Y V + + LV E+ G L D+L Q+ + E + +
Sbjct: 57 MMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEG 116
Query: 60 VYY 62
+ Y
Sbjct: 117 MAY 119
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85;
cyclin-dependent kinase, signaling protein,transfera
cycle complex; HET: MES AGS; 2.90A {Saccharomyces
cerevisiae} PDB: 2pk9_A*
Length = 317
Score = 48.7 bits (117), Expect = 9e-09
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV------LTEEEARRIFRQIAT 58
+H NI+ +Y+V K+ LV E+ +L ++D + V L + Q+
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 59 AVYYCHK 65
+ +CH+
Sbjct: 120 GLAFCHE 126
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 48.5 bits (116), Expect = 9e-09
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M HPNII + V + +++V EY G L FL T + + R IA+
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 60 VYY 62
+ Y
Sbjct: 160 MKY 162
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive,
active, ribosomal S6 kinase, activation, alternative
initiation, ATP-binding; HET: TPO STU; 2.35A {Homo
sapiens} PDB: 3a61_A* 3a60_A*
Length = 327
Score = 48.7 bits (117), Expect = 9e-09
Identities = 19/65 (29%), Positives = 39/65 (60%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ V+HP I+ + F+ K+ L++EY +GGEL+ L+++ + E+ A +I+ A+
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 61 YYCHK 65
+ H+
Sbjct: 135 GHLHQ 139
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 48.5 bits (116), Expect = 9e-09
Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M+SV +P++ + + + L+ + G L D++ + K + + QIA
Sbjct: 71 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 60 VYY 62
+ Y
Sbjct: 130 MNY 132
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 48.7 bits (116), Expect = 9e-09
Identities = 12/65 (18%), Positives = 27/65 (41%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ P I+ Y F + ++ + ME+ GG L L + + E+ ++ + +
Sbjct: 85 LHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGL 144
Query: 61 YYCHK 65
Y +
Sbjct: 145 TYLRE 149
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo
sapiens} PDB: 3a8w_A* 1zrz_A*
Length = 345
Score = 48.4 bits (116), Expect = 9e-09
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
+ HP ++ ++ F+ ++ V+EY GG+L + +++ L EE AR +I+ A+ Y
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 63 CHK 65
H+
Sbjct: 126 LHE 128
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 48.5 bits (116), Expect = 1e-08
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 1 MSSVRHPNIIHIYEV-FENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIA 57
M+ +RH N++ + V E + + +V EY A G L D+L + VL + + +
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 299
Query: 58 TAVYY 62
A+ Y
Sbjct: 300 EAMEY 304
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 48.6 bits (116), Expect = 1e-08
Identities = 18/65 (27%), Positives = 23/65 (35%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ +RHPN I + LVMEY G KK L E E + +
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGL 167
Query: 61 YYCHK 65
Y H
Sbjct: 168 AYLHS 172
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase;
HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7
PDB: 2jed_A*
Length = 345
Score = 48.4 bits (116), Expect = 1e-08
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
+ HP + H++ F+ +E + VMEY GG+L + A +I + +
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 63 CHK 65
H
Sbjct: 134 LHS 136
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation,
transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus}
PDB: 1tbn_A 1tbo_A 2e73_A
Length = 674
Score = 48.5 bits (115), Expect = 1e-08
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
+ P + ++ F+ +++ VMEY GG+L + Q E A +IA +++
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 63 CHK 65
Sbjct: 458 LQS 460
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle,
phosphorylation, ATP-BIN cell division, disease
mutation, kinase; 3.00A {Homo sapiens}
Length = 308
Score = 48.3 bits (116), Expect = 1e-08
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Query: 1 MSSVRHPNIIHIYEVF-----ENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIF 53
+ + HPN++ + +V + K+ LV E+ +L +LD+ L E + +
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM 126
Query: 54 RQIATAVYYCHK 65
RQ + + H
Sbjct: 127 RQFLRGLDFLHA 138
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 48.1 bits (115), Expect = 1e-08
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--------DQKKVLTEEEARRI 52
MS HPNI+ Y F ++++ LVM+ +GG + D + + VL E I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 53 FRQIATAVYYCHK 65
R++ + Y HK
Sbjct: 127 LREVLEGLEYLHK 139
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 48.4 bits (115), Expect = 1e-08
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M + +P I+ + V + E ++LVME A GG L+ FL +++ + + Q++
Sbjct: 390 MHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMG 448
Query: 60 VYY 62
+ Y
Sbjct: 449 MKY 451
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 48.1 bits (115), Expect = 1e-08
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 1 MSSVRHPNIIHIYEV--FENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIA 57
+ S++H NI+ V R + L+MEY G L D+L K+ + + + QI
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 124
Query: 58 TAVYY 62
+ Y
Sbjct: 125 KGMEY 129
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 48.1 bits (115), Expect = 1e-08
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 1 MSSVRHPNIIHIYEV--FENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIA 57
+ S++H NI+ V R + L+MEY G L D+L K+ + + + QI
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC 155
Query: 58 TAVYY 62
+ Y
Sbjct: 156 KGMEY 160
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity,
atypical PKC, trans transferase substrate complex; HET:
TPO ADE; 2.40A {Mus musculus}
Length = 396
Score = 48.1 bits (115), Expect = 1e-08
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
+ HP ++ ++ F+ ++ V+EY GG+L + +++ L EE AR +I+ A+ Y
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 63 CHK 65
H+
Sbjct: 169 LHE 171
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase,
transferase, serine/threonine-protein kinase; HET: TPO
ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A*
2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A*
3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A
1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Length = 337
Score = 48.0 bits (115), Expect = 1e-08
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ + RHP + + F+ +++ VMEYA GGEL+ L +++V TEE AR +I +A+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 61 YYCHK 65
Y H
Sbjct: 119 EYLHS 123
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 48.1 bits (115), Expect = 1e-08
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 1 MSSVRHPNIIHIYEV--FENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIA 57
+ ++ I+ V R+ + LVMEY G L DFL + L QI
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQIC 137
Query: 58 TAVYY 62
+ Y
Sbjct: 138 KGMEY 142
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 47.9 bits (114), Expect = 1e-08
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIAT 58
M +RH ++ +Y V + E + +V EY + G L DFL + K L + + QIA+
Sbjct: 316 MKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 59 AVYY 62
+ Y
Sbjct: 375 GMAY 378
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 48.1 bits (115), Expect = 2e-08
Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M HPNII + V ++V EY G L FL T + + R +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAG 163
Query: 60 VYY 62
+ Y
Sbjct: 164 MRY 166
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 47.7 bits (114), Expect = 2e-08
Identities = 13/65 (20%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 1 MSSVRHPNIIHIYEV--FENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIA 57
+ ++ H NI+ + + + L+ME+ G L ++L K + ++ + QI
Sbjct: 77 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 58 TAVYY 62
+ Y
Sbjct: 137 KGMDY 141
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 48.0 bits (115), Expect = 2e-08
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 1 MSSVRHPNIIHIYEV-FENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIA 57
M+ +RH N++ + V E + + +V EY A G L D+L + VL + + +
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 127
Query: 58 TAVYY 62
A+ Y
Sbjct: 128 EAMEY 132
>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of
P90 ribosomal S6 kinase 2, ATP- binding,
nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus
musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A*
Length = 325
Score = 47.5 bits (114), Expect = 2e-08
Identities = 17/65 (26%), Positives = 38/65 (58%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ V HP I+ ++ F+ K+ L++++ GG+L+ L ++ + TEE+ + ++A A+
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 61 YYCHK 65
+ H
Sbjct: 140 DHLHS 144
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 47.7 bits (114), Expect = 2e-08
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 1 MSSVRHPNIIHIYEV--FENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIAT 58
+ ++ H +II + LVMEY G L D+L + + + +QI
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLFAQQICE 145
Query: 59 AVYY 62
+ Y
Sbjct: 146 GMAY 149
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 47.2 bits (113), Expect = 2e-08
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M ++ HP+I+ + + E E ++ME GEL +L K L QI A
Sbjct: 67 MKNLDHPHIVKLIGIIE-EEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 60 VYY 62
+ Y
Sbjct: 126 MAY 128
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 47.3 bits (113), Expect = 2e-08
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
+ S+ H +I+ + + + LV +Y G L D + + L + QIA
Sbjct: 69 IGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKG 127
Query: 60 VYY 62
+YY
Sbjct: 128 MYY 130
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 47.2 bits (113), Expect = 2e-08
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIAT 58
M ++HPN++ + V ++ E+ G L D+L ++ ++ + QI++
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 59 AVYY 62
A+ Y
Sbjct: 123 AMEY 126
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase,
transferase-transferase inhibito; HET: TPO 07U; 2.05A
{Homo sapiens}
Length = 353
Score = 47.2 bits (113), Expect = 3e-08
Identities = 15/63 (23%), Positives = 32/63 (50%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
+ HP + ++ F+ +++ VME+ GG+L + + + E AR +I +A+ +
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 63 CHK 65
H
Sbjct: 140 LHD 142
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 47.1 bits (112), Expect = 3e-08
Identities = 12/64 (18%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 1 MSSVRHPNIIHIYEV-FENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIAT 58
M HPN++ + + + ++V+ Y G+L +F+ ++ T ++ Q+A
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 203
Query: 59 AVYY 62
+ +
Sbjct: 204 GMKF 207
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent
kinase, cell cycle control, alpha/beta, complex
(inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP:
d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B*
2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B
2w9f_B
Length = 326
Score = 47.2 bits (113), Expect = 3e-08
Identities = 14/72 (19%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 1 MSSVRHPNIIHIYEVF-----ENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIF 53
+ + HPN++ +++V + K+ LV E+ +L +LD+ + E + +
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM 126
Query: 54 RQIATAVYYCHK 65
Q+ + + H
Sbjct: 127 FQLLRGLDFLHS 138
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 46.9 bits (112), Expect = 3e-08
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M S+ H N+I +Y V M +V E A G L D L + R Q+A
Sbjct: 75 MHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
Query: 60 VYY 62
+ Y
Sbjct: 134 MGY 136
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 46.9 bits (112), Expect = 3e-08
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M H NII + V + M+++ EY G L FL ++ + + + R IA
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159
Query: 60 VYY 62
+ Y
Sbjct: 160 MKY 162
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase,
transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB:
3iw4_A*
Length = 353
Score = 46.8 bits (112), Expect = 3e-08
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
+ P + ++ F+ +++ VMEY GG+L + Q E A +IA +++
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 63 CHK 65
Sbjct: 137 LQS 139
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 46.8 bits (112), Expect = 3e-08
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M HP+I+ + V + ++ME GEL FL +K L Q++TA
Sbjct: 70 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 128
Query: 60 VYY 62
+ Y
Sbjct: 129 LAY 131
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open
conformation, transferase; HET: TPO; 2.80A
{Saccharomyces cerevisiae} SCOP: d.144.1.7
Length = 318
Score = 46.8 bits (112), Expect = 3e-08
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+S V HP II ++ F++ +++ ++M+Y GGEL+ L + + A+ ++ A+
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 119
Query: 61 YYCHK 65
Y H
Sbjct: 120 EYLHS 124
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 46.9 bits (112), Expect = 3e-08
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 1 MSSVRHPNIIHIYEV-FENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIAT 58
M HPN++ + + + ++V+ Y G+L +F+ ++ T ++ Q+A
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 139
Query: 59 AVYY 62
+ Y
Sbjct: 140 GMKY 143
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 47.0 bits (112), Expect = 4e-08
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 1 MSSVRHPNIIHIY----EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+ ++H NI+ + L+ + G L DFL + V++ E I +
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-KANVVSWNELCHIAETM 130
Query: 57 ATAVYYCH 64
A + Y H
Sbjct: 131 ARGLAYLH 138
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 46.8 bits (112), Expect = 4e-08
Identities = 12/63 (19%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M ++ H ++ +Y V + + ++ EY A G L ++L + + ++ + + + A
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEA 132
Query: 60 VYY 62
+ Y
Sbjct: 133 MEY 135
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 46.8 bits (111), Expect = 4e-08
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M HP+I+ + V + ++ME GEL FL +K L Q++TA
Sbjct: 445 MRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTA 503
Query: 60 VYY 62
+ Y
Sbjct: 504 LAY 506
>3pvu_A Beta-adrenergic receptor kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding, I
membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A*
3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A*
1bak_A
Length = 695
Score = 46.8 bits (111), Expect = 4e-08
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+S+ P I+ + F +K+ +++ GG+L+ L Q V +E + R +I +
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 61 YYCHK 65
+ H
Sbjct: 306 EHMHN 310
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase,
ATP-BI nucleotide-binding, cardiac contractility, muscle
different; HET: BI8; 2.80A {Homo sapiens}
Length = 412
Score = 46.6 bits (111), Expect = 4e-08
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQK-KVLTEEEARRIFRQIATA 59
+ + I ++ F++ + LVMEY GG+L L + + + E AR +I A
Sbjct: 115 LVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA 174
Query: 60 VYYCHK 65
+ H+
Sbjct: 175 IDSVHR 180
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase,
apoptosis, ATP-binding, cytoplasm, endoplasmic
reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A
{Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Length = 373
Score = 46.5 bits (111), Expect = 5e-08
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 3 SVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYY 62
+V+HP ++ ++ F+ +K+ V++Y GGEL+ L +++ E AR +IA+A+ Y
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGY 154
Query: 63 CHK 65
H
Sbjct: 155 LHS 157
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 46.6 bits (111), Expect = 5e-08
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIAT 58
M +++H ++ ++ V +E + ++ E+ A G L DFL D+ + QIA
Sbjct: 237 MKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 295
Query: 59 AVYY 62
+ +
Sbjct: 296 GMAF 299
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase,
inhibitor, transf transferase inhibitor complex; HET:
0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A*
2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A*
2h9v_A*
Length = 410
Score = 46.2 bits (110), Expect = 5e-08
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
M+ P ++ ++ F++ + +VMEY GG+L L + E+ AR ++ A+
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLAL 181
Query: 61 YYCHK 65
H
Sbjct: 182 DAIHS 186
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 46.0 bits (110), Expect = 6e-08
Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIATA 59
M + HP ++ Y V + +V EY + G L ++L K L + + +
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEG 116
Query: 60 VYY 62
+ +
Sbjct: 117 MAF 119
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 45.8 bits (109), Expect = 9e-08
Identities = 11/64 (17%), Positives = 21/64 (32%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ S P I+ + F + + ME + + E ++ I A+
Sbjct: 78 LKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKAL 137
Query: 61 YYCH 64
YY
Sbjct: 138 YYLK 141
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 45.9 bits (109), Expect = 9e-08
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIAT 58
M +RH ++ +Y V + E + +V EY + G L DFL + K L + + QIA+
Sbjct: 233 MKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 59 AVYY 62
+ Y
Sbjct: 292 GMAY 295
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA;
HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Length = 437
Score = 45.5 bits (108), Expect = 1e-07
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQ-KKVLTEEEARRIFRQIATA 59
+ + I ++ F++ + LVM+Y GG+L L + + L EE AR ++ A
Sbjct: 128 LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIA 187
Query: 60 VYYCHK 65
+ H+
Sbjct: 188 IDSVHQ 193
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 45.0 bits (107), Expect = 2e-07
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 1 MSSVRHPNIIHIYEV-FENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFRQIAT 58
M + HPN++ + + +++ Y G+L F+ ++ T ++ Q+A
Sbjct: 76 MRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVAR 135
Query: 59 AVYY 62
+ Y
Sbjct: 136 GMEY 139
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 44.8 bits (106), Expect = 2e-07
Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 6/69 (8%)
Query: 1 MSSVRHPNIIHIY-----EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQ 55
+ + H NI + R + +LVMEY G L +L + R+
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL-SLHTSDWVSSCRLAHS 119
Query: 56 IATAVYYCH 64
+ + Y H
Sbjct: 120 VTRGLAYLH 128
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 44.6 bits (106), Expect = 2e-07
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-------DQKKVLTEEEARRIF 53
+S H NI+ V ++ME AGG+L FL Q L + +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 54 RQIA 57
R IA
Sbjct: 147 RDIA 150
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 44.7 bits (106), Expect = 2e-07
Identities = 17/64 (26%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL-------DQKKVLTEEEARRIF 53
+S H NI+ V +++E AGG+L FL Q L + +
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 54 RQIA 57
R IA
Sbjct: 188 RDIA 191
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex,
transferase,transcription; HET: BAX; 2.20A {Homo
sapiens}
Length = 405
Score = 44.4 bits (105), Expect = 3e-07
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 16/74 (21%)
Query: 5 RHPNIIHIYEVFENR--EKMVLVMEYAAGGE--LYDFLD---------QKKVLTEEEARR 51
+HPN+I + +VF + K+ L+ +YA E L+ + + L +
Sbjct: 76 KHPNVISLQKVFLSHADRKVWLLFDYA---EHDLWHIIKFHRASKANKKPVQLPRGMVKS 132
Query: 52 IFRQIATAVYYCHK 65
+ QI ++Y H
Sbjct: 133 LLYQILDGIHYLHA 146
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural
genomics, structural genomics consortium, SGC; 1.80A
{Toxoplasma gondii}
Length = 413
Score = 44.3 bits (104), Expect = 3e-07
Identities = 9/72 (12%), Positives = 17/72 (23%), Gaps = 11/72 (15%)
Query: 4 VRHPNIIHIYEVFENREKM-----VLVMEYAAG------GELYDFLDQKKVLTEEEARRI 52
V+ P + V + M + L K L ++
Sbjct: 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQL 216
Query: 53 FRQIATAVYYCH 64
Q+ + H
Sbjct: 217 TLQVIRLLASLH 228
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein
coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl
ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB:
3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Length = 543
Score = 44.0 bits (104), Expect = 4e-07
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 2 SSVRHPNIIHIYEVFENREKMVLVMEYAAGGEL----YDFLDQKKVLTEEEARRIFRQIA 57
+ V I+ + FE + + LVM GG++ Y+ + E A QI
Sbjct: 240 AKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 58 TAVYYCHK 65
+ + + H+
Sbjct: 300 SGLEHLHQ 307
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 43.7 bits (104), Expect = 5e-07
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIAT 58
M ++H ++ +Y V +E + ++ EY G L DFL LT + + QIA
Sbjct: 62 MKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 59 AVYY 62
+ +
Sbjct: 121 GMAF 124
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase,
phosphorylation, serine/threonine protein kinase; 1.8A
{Homo sapiens} SCOP: d.144.1.7
Length = 355
Score = 43.4 bits (103), Expect = 6e-07
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYCH 64
+ P ++ ++ F+ K+ L+++Y GGEL+ L Q++ TE E + +I A+ + H
Sbjct: 117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 65 K 65
K
Sbjct: 177 K 177
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding;
HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A*
3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A*
Length = 351
Score = 43.4 bits (103), Expect = 6e-07
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 5 RHPNIIHIYEVF--------ENREKMVLVMEYAAGGELYDFLDQKKV-LTEEEARRIFRQ 55
+H N++++ E+ + + LV ++ +L L V T E +R+ +
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQM 132
Query: 56 IATAVYYCHK 65
+ +YY H+
Sbjct: 133 LLNGLYYIHR 142
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 43.5 bits (103), Expect = 6e-07
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 12/74 (16%)
Query: 1 MSSVRHPNIIHIYEV------FENREKMVLVMEYAAGGELYDFL------DQKKVLTEEE 48
M HP++ + V ++++ + G+L+ FL + L +
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 49 ARRIFRQIATAVYY 62
R IA + Y
Sbjct: 139 LVRFMVDIACGMEY 152
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein
kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Length = 326
Score = 43.5 bits (103), Expect = 6e-07
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
Query: 5 RHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLD--QKKVLTEEEARRIFRQI 56
H NI Y F +++ LVME+ G + D + + L EE I R+I
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138
Query: 57 ATAVYYCHK 65
+ + H+
Sbjct: 139 LRGLSHLHQ 147
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 43.4 bits (103), Expect = 6e-07
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKK---VLTEEEARRIFRQIA 57
++H NI+ F + + ME GG L L K E+ +QI
Sbjct: 73 HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132
Query: 58 TAVYYCH 64
+ Y H
Sbjct: 133 EGLKYLH 139
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 43.1 bits (102), Expect = 7e-07
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
M+ +PNI+ + V + M L+ EY A G+L +FL
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 42.7 bits (101), Expect = 1e-06
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
++ ++H +I+ + V +++V EY G+L FL
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL 134
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 42.7 bits (101), Expect = 1e-06
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 1 MSSVRHPNIIHIYEV-----FENREKMVLVMEYAAGGELYDFL------DQKKVLTEEEA 49
M HPN+I + V + K ++++ + G+L+ +L K + +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 50 RRIFRQIATAVYY 62
+ IA + Y
Sbjct: 150 LKFMVDIALGMEY 162
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP;
2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Length = 576
Score = 42.5 bits (100), Expect = 1e-06
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 2 SSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLDQ--KKVLTEEEARRIFRQIATA 59
V ++ + +E ++ + LV+ GG+L + + E A +I
Sbjct: 239 EKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCG 298
Query: 60 VYYCHK 65
+ H+
Sbjct: 299 LEDLHR 304
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 42.2 bits (100), Expect = 1e-06
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
+ V HP++I +Y ++L++EYA G L FL
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 42.3 bits (100), Expect = 1e-06
Identities = 10/72 (13%), Positives = 26/72 (36%), Gaps = 10/72 (13%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL----------DQKKVLTEEEAR 50
M +++ + V + +++ME G+L +L + +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 51 RIFRQIATAVYY 62
++ +IA + Y
Sbjct: 142 QMAGEIADGMAY 153
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 42.2 bits (100), Expect = 2e-06
Identities = 9/38 (23%), Positives = 23/38 (60%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
+ ++HPN++ + V + + ++ Y + G+L++FL
Sbjct: 66 RARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 42.2 bits (100), Expect = 2e-06
Identities = 11/38 (28%), Positives = 24/38 (63%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
+++++H +I+ Y V + + +++V EY G+L FL
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL 108
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 41.9 bits (99), Expect = 2e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 5 RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
HPNII++ E+R + L +EYA G L DFL
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma
gondii} PDB: 3q5z_A*
Length = 371
Score = 41.2 bits (96), Expect = 4e-06
Identities = 6/69 (8%), Positives = 15/69 (21%), Gaps = 8/69 (11%)
Query: 5 RHPNIIHIYEVFENREKM--VLVMEYAAG------GELYDFLDQKKVLTEEEARRIFRQI 56
P + ++ +L+M A+ L + + Q+
Sbjct: 144 SQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQL 203
Query: 57 ATAVYYCHK 65
Sbjct: 204 IRLAANLQS 212
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 40.4 bits (95), Expect = 6e-06
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGG--ELY-DFLDQKKVLTEEEARRIFRQIA 57
M +V P + Y + + ME + Y +D+ + + E+ +I I
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 163
Query: 58 TAVYYCH 64
A+ + H
Sbjct: 164 KALEHLH 170
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 40.3 bits (95), Expect = 7e-06
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGG--ELY-DFLDQKKVLTEEEARRIFRQIA 57
M +V P + Y + + ME + Y +D+ + + E+ +I I
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 58 TAVYYCH 64
A+ + H
Sbjct: 120 KALEHLH 126
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 40.4 bits (95), Expect = 7e-06
Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 6/70 (8%)
Query: 1 MSSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFLD-----QKKVLTEEEARRIFRQ 55
M S P I+ Y + ME + F V+ EE +I
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMSTS-FDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 56 IATAVYYCHK 65
A+ + +
Sbjct: 134 TVKALNHLKE 143
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 40.0 bits (94), Expect = 9e-06
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSSV-RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
M + +H NII++ + +++EYA+ G L ++L
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 178
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural
genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Length = 458
Score = 39.4 bits (92), Expect = 2e-05
Identities = 11/65 (16%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 5 RHPNIIHIYEVF-----ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATA 59
H +++ + ++ E +++ +V+E A + LTE + + +
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEI-ADSDFKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 60 VYYCH 64
V Y H
Sbjct: 169 VKYVH 173
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 39.2 bits (92), Expect = 2e-05
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSSV-RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
M + +H NII++ + +++EYA+ G L ++L
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 132
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR;
3.30A {Ustilago maydis}
Length = 394
Score = 38.9 bits (91), Expect = 2e-05
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 11/75 (14%)
Query: 1 MSSVRHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLD----QKKVLTEEEAR 50
M V+HPN++ + F ++ + LV+EY +Y K+ + +
Sbjct: 86 MRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY-VPETVYRASRHYAKLKQTMPMLLIK 144
Query: 51 RIFRQIATAVYYCHK 65
Q+ ++ Y H
Sbjct: 145 LYMYQLLRSLAYIHS 159
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor,
transferase-transferase inhibitor CO; HET: ANP; 1.30A
{Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A*
3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A
3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A*
3owj_A* 3owk_A* ...
Length = 330
Score = 38.8 bits (91), Expect = 2e-05
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 6 HPNIIHIYEVFENREKM--VLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYC 63
PNII + ++ ++ LV E+ + LT+ + R +I A+ YC
Sbjct: 90 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYC 146
Query: 64 H 64
H
Sbjct: 147 H 147
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 38.8 bits (91), Expect = 3e-05
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 MSSV-RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
+S + H NI+++ +++ EY G+L +FL
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase;
HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB:
1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A*
1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A*
3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Length = 420
Score = 38.5 bits (90), Expect = 3e-05
Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 11/75 (14%)
Query: 1 MSSVRHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLDQ----KKVLTEEEAR 50
M + H NI+ + F ++ + LV++Y +Y K+ L +
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY-VPETVYRVARHYSRAKQTLPVIYVK 159
Query: 51 RIFRQIATAVYYCHK 65
Q+ ++ Y H
Sbjct: 160 LYMYQLFRSLAYIHS 174
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 38.5 bits (90), Expect = 3e-05
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 1 MSSV-RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
M + +H NII++ + +++EYA+ G L ++L
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 166
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 38.4 bits (90), Expect = 4e-05
Identities = 10/39 (25%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 1 MSSV-RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
M+ + H NI+++ + L+ EY G+L ++L
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 37.2 bits (87), Expect = 9e-05
Identities = 11/39 (28%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 1 MSSV-RHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
MS + +H NI+++ + ++++ EY G+L +FL
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 36.9 bits (86), Expect = 1e-04
Identities = 6/35 (17%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 5 RHPNIIHIYEV-FENREKMVLVMEYAAGGELYDFL 38
H N++++ + +++++E+ G L +L
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase,
splicing, human, 10Z-hymendialdisine, structural
genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Length = 339
Score = 36.1 bits (84), Expect = 3e-04
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 8 NIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIFRQIATAVYYCHK 65
+ + E FE+ + +V E G YDF+ + + R++ QI +V + H
Sbjct: 78 RCVQMLEWFEHHGHICIVFE-LLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS 136
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2;
KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase,
structural genomics consortium; HET: SEP PTR IRB; 2.28A
{Homo sapiens} PDB: 3k2l_A*
Length = 429
Score = 35.9 bits (83), Expect = 3e-04
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 8 NIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIFRQIATAVYYCHK 65
N+IH+ E F R + + E LY+ + + K + R+ I + HK
Sbjct: 160 NVIHMLENFTFRNHICMTFEL-LSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria,
structural GE structural genomics consortium, SGC,
transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Length = 360
Score = 35.4 bits (82), Expect = 4e-04
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Query: 8 NIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIFRQIATAVYYCHK 65
NI+ + F + M L+ E G LY+ + + E+ + +I A+ Y K
Sbjct: 97 NIVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 35.2 bits (80), Expect = 5e-04
Identities = 9/50 (18%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 16 FENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYCHK 65
F +++ +V+E+ GG + + + K+ + A+ I Q+ ++
Sbjct: 131 FFKDDQLFIVLEFEFGGIDLEQM-RTKLSSLATAKSILHQLTASLAVAEA 179
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase;
1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A
3nr9_A*
Length = 355
Score = 35.0 bits (81), Expect = 6e-04
Identities = 10/60 (16%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Query: 8 NIIHIYEVFENREKMVLVMEYAAGGELYDFLDQKKV--LTEEEARRIFRQIATAVYYCHK 65
+ + + F M + E G ++FL + R + Q+ A+ + H+
Sbjct: 83 LCVLMSDWFNFHGHMCIAFE-LLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural
genomics CON SGC; 2.05A {Plasmodium berghei} PDB:
3nie_A*
Length = 432
Score = 34.0 bits (78), Expect = 0.001
Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 1 MSSVRHPNIIHIYEVF--ENREKMV---LVMEYAAGGELYDFLDQKKVLTEEEARRIFRQ 55
++ ++ II +Y++ ++ K +V+E A +L LTEE + I
Sbjct: 79 LNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEEHIKTILYN 137
Query: 56 IATAVYYCH 64
+ + H
Sbjct: 138 LLLGENFIH 146
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis,
transferase; 2.00A {Leishmania major}
Length = 360
Score = 33.8 bits (78), Expect = 0.001
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 12/80 (15%)
Query: 1 MSSVRHPNIIHIYEVF-------ENREKMVLVMEYAAGGELYDFLD----QKKVLTEEEA 49
++ + HPNI+ + F + +VMEY L+ ++
Sbjct: 73 LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEY-VPDTLHRCCRNYYRRQVAPPPILI 131
Query: 50 RRIFRQIATAVYYCHKVQDN 69
+ Q+ ++ H N
Sbjct: 132 KVFLFQLIRSIGCLHLPSVN 151
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in
transferase-transferase inhibitor complex; HET: JBI;
2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Length = 464
Score = 34.1 bits (78), Expect = 0.001
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 9/70 (12%)
Query: 1 MSSVRHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFR 54
M V H NII + VF E + + LVME L + + L E +
Sbjct: 115 MKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQME--LDHERMSYLLY 171
Query: 55 QIATAVYYCH 64
Q+ + + H
Sbjct: 172 QMLCGIKHLH 181
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 33.8 bits (77), Expect = 0.002
Identities = 7/39 (17%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 5 RHPNIIHIY-EVFENREKMVLVMEYAAGGELYDFLDQKK 42
H N++++ + +++++E+ G L +L K+
Sbjct: 84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 122
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 32.9 bits (74), Expect = 0.004
Identities = 10/73 (13%), Positives = 22/73 (30%), Gaps = 16/73 (21%)
Query: 4 VRHPNIIHIYEVFENREKMVL------VMEYAAGGELYDFL--DQKKVLTEEEARRIFRQ 55
V++ F K++L V ++ + LT +E + + +
Sbjct: 253 VQNAKAW---NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLK 309
Query: 56 IATAVYYCHKVQD 68
+ QD
Sbjct: 310 YLD-----CRPQD 317
Score = 24.0 bits (51), Expect = 5.0
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 9/45 (20%)
Query: 12 IYEVFENREKMVLVMEYAAGGELYDFLDQ-KKVLTEEEARRIFRQ 55
I VFE+ + + D D K +L++EE I
Sbjct: 21 ILSVFED--------AFVDNFDCKDVQDMPKSILSKEEIDHIIMS 57
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A;
serine/threonine-protein kinase, minibrain homolog,
nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A
{Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Length = 382
Score = 32.8 bits (75), Expect = 0.004
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 8 NIIHIYEVFENREKMVLVMEYAAGGELYDFL--DQKKVLTEEEARRIFRQIATAVYYCHK 65
I+H+ F R + LV E LYD L + ++ R+ +Q+ TA+ +
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEM-LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175
Query: 66 VQDN 69
+ +
Sbjct: 176 PELS 179
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP
kinase, PMK, STK26, stress-activated protein kinase,
structural genomics, PSI; 2.09A {Homo sapiens}
Length = 353
Score = 32.7 bits (75), Expect = 0.004
Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 1 MSSVRHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFR 54
+ ++H N+I + +VF N LVM + +L + K +EE+ + +
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPF-MQTDLQKIMGLK--FSEEKIQYLVY 133
Query: 55 QIATAVYYCH 64
Q+ + Y H
Sbjct: 134 QMLKGLKYIH 143
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular
signal regulated kinase 3, serine phosphorylation,
threonine phosphorylation; 2.25A {Homo sapiens}
Length = 320
Score = 31.9 bits (73), Expect = 0.008
Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 12/76 (15%)
Query: 1 MSSVRHPNIIHIYEVF--ENREKMVLVMEYAAGGELY---DFLD-------QKKVLTEEE 48
+ + H NI+ ++E+ + V +Y ++++ ++ L EE
Sbjct: 62 IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEH 121
Query: 49 ARRIFRQIATAVYYCH 64
AR Q+ + Y H
Sbjct: 122 ARLFMYQLLRGLKYIH 137
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling
pathways, linear binding motif; HET: ANP; 1.33A {Homo
sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A*
2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X*
2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A*
1pmq_A* ...
Length = 371
Score = 31.2 bits (71), Expect = 0.011
Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 9/70 (12%)
Query: 1 MSSVRHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFR 54
M V H NII + VF E + + +VME L + + L E +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQME--LDHERMSYLLY 134
Query: 55 QIATAVYYCH 64
Q+ + + H
Sbjct: 135 QMLCGIKHLH 144
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP
kinase insertion, autophosphorylation, transferase; HET:
BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X*
2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A*
2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A*
3l8x_A* 3mvl_A* 3mvm_A* ...
Length = 367
Score = 31.1 bits (71), Expect = 0.013
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 1 MSSVRHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFR 54
+ ++H N+I + +VF E + LV G +L + + + + LT++ + +
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIV-KCQKLTDDHVQFLIY 139
Query: 55 QIATAVYYCH 64
QI + Y H
Sbjct: 140 QILRGLKYIH 149
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK
Ser/Thr protein kinase fold, Ser/Thr protein kinase,
TRA; 1.95A {Leishmania major}
Length = 362
Score = 31.1 bits (71), Expect = 0.015
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 1 MSSVRHPNIIHIYEVF-----ENREKMVLVMEYAAGGELYDFL-DQKKVLTEEEARRIFR 54
++ HPNI+ + ++F K+ LV E +L + DQ+ V++ + +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTEL-MRTDLAQVIHDQRIVISPQHIQYFMY 141
Query: 55 QIATAVYYCH 64
I ++ H
Sbjct: 142 HILLGLHVLH 151
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase;
HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Length = 367
Score = 30.8 bits (70), Expect = 0.017
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 1 MSSVRHPNIIHIYEVF------ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFR 54
+ +RH N+I + +VF ++ LVM + G +L + + + L E+ + +
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPF-MGTDLGKLM-KHEKLGEDRIQFLVY 135
Query: 55 QIATAVYYCH 64
Q+ + Y H
Sbjct: 136 QMLKGLRYIH 145
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces
cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A*
1how_A 2jd5_A
Length = 373
Score = 30.1 bits (68), Expect = 0.028
Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 8 NIIHIYEVFE----NREKMVLVMEYAAGGELYDFLDQ--KKVLTEEEARRIFRQIATAVY 61
+I+ + + F N +V+V E G L + + + + ++I +Q+ +
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFE-VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLD 145
Query: 62 YCHK 65
Y H+
Sbjct: 146 YMHR 149
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3;
transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae}
PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Length = 353
Score = 29.9 bits (68), Expect = 0.033
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 1 MSSVRHPNIIHIYEVF-----ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQ 55
+ +H NII I+ + EN ++ ++ E +L+ + ++L+++ + Q
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQEL-MQTDLHRVI-STQMLSDDHIQYFIYQ 120
Query: 56 IATAVYYCH 64
AV H
Sbjct: 121 TLRAVKVLH 129
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase,
alternative splicing, ATP-binding, chromosome partition,
differentiation, mRNA processing; 1.73A {Homo sapiens}
PDB: 1wbp_A* 3beg_A* 2x7g_A*
Length = 397
Score = 29.9 bits (67), Expect = 0.038
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 2 SSVRHPN---IIHIYEVFE----NREKMVLVMEYAAGGELYDFLDQ--KKVLTEEEARRI 52
S PN ++ + + F+ N + +V E G L ++ + + L ++I
Sbjct: 93 SDPNDPNREMVVQLLDDFKISGVNGTHICMVFE-VLGHHLLKWIIKSNYQGLPLPCVKKI 151
Query: 53 FRQIATAVYYCH 64
+Q+ + Y H
Sbjct: 152 IQQVLQGLDYLH 163
>3qyz_A Mitogen-activated protein kinase 1; transferase,
serine/threonine-protein kinase, ATP-binding CE
phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus
norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A*
4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A
3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A*
2oji_A* ...
Length = 364
Score = 29.6 bits (67), Expect = 0.049
Identities = 16/69 (23%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 1 MSSVRHPNIIHIYEVF-----ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQ 55
+ RH NII I ++ E + + +V + +LY L + + L+ + Q
Sbjct: 79 LLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL-METDLYKLL-KTQHLSNDHICYFLYQ 136
Query: 56 IATAVYYCH 64
I + Y H
Sbjct: 137 ILRGLKYIH 145
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase;
structural genomics consortium, SGC, transferase; 2.37A
{Cryptosporidium parvum iowa II}
Length = 388
Score = 29.7 bits (67), Expect = 0.050
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 6 HPNIIHIYEVF--ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAVYYC 63
H NI+++ V +N + LV +Y +L+ + + +L + + Q+ + Y
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDY-METDLHAVI-RANILEPVHKQYVVYQLIKVIKYL 125
Query: 64 H 64
H
Sbjct: 126 H 126
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody,
immune system; NMR {Homo sapiens}
Length = 512
Score = 27.7 bits (61), Expect = 0.24
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 92 TAMYYC 97
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A
{Physarum polycephalum} SCOP: d.144.1.3
Length = 342
Score = 26.4 bits (57), Expect = 0.74
Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 4/52 (7%)
Query: 11 HIYEVFENREKM--VLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIATAV 60
+ V +L+ME G L E + +Q+ + +
Sbjct: 144 KSFRVITTLANQANILLMELVRGITLNKL--TTTSAPEVLTKSTMQQLGSLM 193
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human,
immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1
b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Length = 232
Score = 25.9 bits (58), Expect = 1.00
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 90 TAVYYC 95
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune
system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Length = 263
Score = 25.6 bits (57), Expect = 1.0
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 90 TAMYYC 95
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A
3chn_A 1r70_B 3cm9_A
Length = 475
Score = 26.1 bits (57), Expect = 1.0
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 92 TAVYYC 97
>1twf_A B220, DNA-directed RNA polymerase II largest subunit;
transcription, mRNA, multiprotein complex; HET: UTP;
2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB:
1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A
1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A*
1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ...
Length = 1733
Score = 25.8 bits (56), Expect = 1.0
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 19 REKMVLVMEY-AAGGELYDFLDQKKVLTEEEARRIFRQI 56
++ + LV + + +VL+ EE IF+ I
Sbjct: 176 KDGLKLVGSWKKDRATGDADEPELRVLSTEEILNIFKHI 214
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1
neutralizing antibody, GP120, immune system; HET: PCA
MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H*
3tje_H* 3thm_H* 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H
3mlz_H 2ykl_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H 3hi1_H*
3uc0_H 3uaj_H 3q1s_H 3fn0_H ...
Length = 239
Score = 25.9 bits (58), Expect = 1.0
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 98 TATYYC 103
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition,
immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A
{Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H*
3mme_H* 2qsc_H*
Length = 248
Score = 25.9 bits (58), Expect = 1.0
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA Y+C
Sbjct: 90 TATYFC 95
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET:
NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1
b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Length = 457
Score = 26.0 bits (57), Expect = 1.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1
GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Length = 267
Score = 25.5 bits (57), Expect = 1.1
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 114 TAIYYC 119
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system
complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB:
3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H
3r06_B 3r08_H
Length = 253
Score = 25.6 bits (57), Expect = 1.2
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TAMYYC 96
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA,
IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB:
3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Length = 257
Score = 25.7 bits (57), Expect = 1.3
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 98 TATYYC 103
>3ux9_B SCFV antibody; five helices, long loop connecting helix,
hydrophobic intera cytokine-immune system complex;
2.80A {Homo sapiens}
Length = 256
Score = 25.7 bits (57), Expect = 1.3
Identities = 4/11 (36%), Positives = 5/11 (45%)
Query: 58 TAVYYCHKVQD 68
A YYC +
Sbjct: 86 EADYYCQVRDN 96
Score = 25.3 bits (56), Expect = 1.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 225 TAVYYC 230
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune
system-viral protein complex, envelope protein; HET:
NAG; 2.05A {Mus musculus}
Length = 261
Score = 25.6 bits (57), Expect = 1.3
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
+AVYYC
Sbjct: 97 SAVYYC 102
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC;
1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H
2mcp_H*
Length = 220
Score = 25.5 bits (57), Expect = 1.3
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TALYYC 96
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin,
immune recognition, influenza A hemagglutini system;
1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H
3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B
3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B
2p8m_B 2p8p_B ...
Length = 232
Score = 25.6 bits (57), Expect = 1.3
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 95 TATYYC 100
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized
SCFV), SCFV, monovalent antibo antibody engineering,
immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Length = 276
Score = 25.3 bits (56), Expect = 1.3
Identities = 4/8 (50%), Positives = 5/8 (62%)
Query: 58 TAVYYCHK 65
A YYC +
Sbjct: 94 FATYYCQQ 101
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S
disease, immunotherapies, APP, immune system; 1.59A
{Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H
3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H
3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H*
1n5y_H* 1n6q_H* 1t03_H* ...
Length = 228
Score = 25.6 bits (57), Expect = 1.4
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 92 TATYYC 97
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing
antibody, immun anti-WEST NIle virus; 1.43A {Homo
sapiens} PDB: 3iyw_H 3qeh_A 3u0t_D 3c08_H 3lmj_H
3lqa_H* 3c09_H* 3pp4_H 3pp3_H 2jb5_H* 2jb6_B* 2eh7_H
2eh8_H 3jwd_H* 3jwo_H* 3t2n_H 3qot_H 3ma9_H 3nfs_H
3nfp_A ...
Length = 230
Score = 25.5 bits (57), Expect = 1.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related
protein; beta propeller, protein binding-immune system
complex; 1.90A {Homo sapiens} PDB: 1pkq_B
Length = 256
Score = 25.5 bits (57), Expect = 1.4
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 114 TAVYYC 119
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain;
human monoclonal antibody, FAB, third variable
antibody-antigen interaction; 1.80A {Homo sapiens} PDB:
3mls_H 3mlt_H 3mlu_H 3mlv_H
Length = 226
Score = 25.5 bits (57), Expect = 1.4
Identities = 3/6 (50%), Positives = 4/6 (66%)
Query: 58 TAVYYC 63
T Y+C
Sbjct: 91 TGKYFC 96
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate
antibody, immune system; HET: MAN; 1.75A {Homo sapiens}
SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M*
1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H*
3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H
2fl5_H*
Length = 225
Score = 25.5 bits (57), Expect = 1.5
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TAIYYC 96
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody,
VHH, interface, binding, antibody, hydrolase; 1.90A
{Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A
2x89_A
Length = 148
Score = 25.2 bits (56), Expect = 1.5
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TAIYYC 96
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the
antigen combining site superantigen FAB VH3
specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
PDB: 1hez_B 1adq_H
Length = 223
Score = 25.1 bits (56), Expect = 1.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F
membrane, envelope protein, fusion protein, membrane,
trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Length = 280
Score = 25.4 bits (56), Expect = 1.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>2vyr_E Human single domain antibody; zinc, complex, nucleus, human MDM4,
immune system, zinc-finger, polymorphism,
metal-binding; 2.00A {Homo sapiens} PDB: 1igm_H 2a9n_H*
2a9m_H
Length = 153
Score = 25.2 bits (56), Expect = 1.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 58 TAVYYCHK 65
TAVYYC K
Sbjct: 91 TAVYYCAK 98
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle
acetylcholine receptor...; immunoglobulin, immune
system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2
PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Length = 215
Score = 25.1 bits (56), Expect = 1.5
Identities = 4/6 (66%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+Y+C
Sbjct: 90 TAIYFC 95
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein
complex, enzyme- inhibitor complex, disease mutation,
glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Length = 257
Score = 25.2 bits (56), Expect = 1.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC,
immune system; HET: NAG; 2.40A {Mus musculus} SCOP:
b.1.1.1 PDB: 3b9k_B*
Length = 115
Score = 25.2 bits (56), Expect = 1.6
Identities = 2/6 (33%), Positives = 4/6 (66%)
Query: 58 TAVYYC 63
+ Y+C
Sbjct: 91 SDFYFC 96
>3eak_A NBBCII10-FGLA; antibody, nanobody, humanization, VHH domain, immune
system; 1.95A {Camelus dromedarius}
Length = 137
Score = 25.2 bits (56), Expect = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 58 TAVYYCHKVQD 68
TAVYYC V+
Sbjct: 94 TAVYYCAAVRG 104
>3v0a_C Llama antibody F12; botulinum neurotoxin, toxin, neurotoxin
associated protein, progenitor toxin complex, VHH bound
interlocked complex; HET: MES; 2.70A {Lama glama}
Length = 152
Score = 25.2 bits (56), Expect = 1.6
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
T VYYC
Sbjct: 99 TGVYYC 104
>3u6r_H Antibody 1:7 (heavy chain); IG-like domain, neutralizing single
chain FV, immune system; 2.67A {Homo sapiens}
Length = 149
Score = 25.3 bits (56), Expect = 1.6
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVY+C
Sbjct: 94 TAVYFC 99
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune
system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Length = 221
Score = 25.2 bits (56), Expect = 1.6
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 93 TAMYYC 98
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure,
peptide-carbohydrate mimicry, VA design, immune system;
1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B*
1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Length = 220
Score = 25.1 bits (56), Expect = 1.6
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
T +YYC
Sbjct: 93 TGIYYC 98
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1;
1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Length = 127
Score = 25.1 bits (56), Expect = 1.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 96 TAVYYC 101
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB:
2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A
1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Length = 127
Score = 25.1 bits (56), Expect = 1.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit,
conformation-specific, amyloid, immune system; 1.54A
{Oryctolagus cuniculus}
Length = 215
Score = 25.2 bits (56), Expect = 1.7
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA Y+C
Sbjct: 87 TATYFC 92
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment,
anti-carbohydrate, anti-LPS, antibody, immunoglobulin,
KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus
musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B*
1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B*
2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B*
3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Length = 222
Score = 25.1 bits (56), Expect = 1.7
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
+A YYC
Sbjct: 93 SATYYC 98
>3g9a_B Minimizer; antibody complex, chromophore, luminescence,
photoprotein, fluorescent protein/immune system
complex, nanobody; HET: GYS; 1.61A {Lama pacos}
Length = 139
Score = 25.2 bits (56), Expect = 1.7
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 92 TARYYC 97
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor
CD8AB MHC complex, immune response, membrane, MHC I,
phosphoprotein, transmembrane; 2.60A {Mus musculus}
Length = 150
Score = 25.0 bits (55), Expect = 1.7
Identities = 2/6 (33%), Positives = 4/6 (66%)
Query: 58 TAVYYC 63
+ Y+C
Sbjct: 94 SDFYFC 99
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder,
immunoglobulin, immune system; HET: ENH; 1.90A {Mus
musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H*
1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H
1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Length = 219
Score = 25.1 bits (56), Expect = 1.7
Identities = 3/6 (50%), Positives = 4/6 (66%)
Query: 58 TAVYYC 63
A Y+C
Sbjct: 91 MATYFC 96
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel,
hydrolase, immune system; 2.00A {Camelus dromedarius}
SCOP: b.1.1.1
Length = 127
Score = 25.1 bits (56), Expect = 1.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 90 TAVYYC 95
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis,
esterolytic, FAB, immune system; 1.22A {Mus musculus}
SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H
1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C
1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B
1cfn_B ...
Length = 227
Score = 25.2 bits (56), Expect = 1.8
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
+AVYYC
Sbjct: 91 SAVYYC 96
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120,
broadly neutralizing antibody, 3B3 single chain variable
fragment, immune system; 2.50A {Homo sapiens}
Length = 256
Score = 25.0 bits (55), Expect = 1.8
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 97 TAVYYC 102
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme,
antigen, allergen, antimic bacteriolytic enzyme,
glycosidase, hydrolase; 1.20A {Mus musculus} PDB:
3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B
1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B
1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Length = 210
Score = 25.2 bits (56), Expect = 1.8
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 90 TATYYC 95
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex
(immunoglobulin/hydrolase), immunoglobulin V region,
signal, hydrolase, glycosidase, bacteriolytic enzyme,
egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB:
1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B
1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H
1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Length = 116
Score = 24.8 bits (55), Expect = 1.8
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 90 TARYYC 95
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase,
immune system; 1.60A {Camelus dromedarius} SCOP:
b.1.1.1
Length = 121
Score = 24.7 bits (55), Expect = 1.9
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 90 TAMYYC 95
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 25.2 bits (56), Expect = 1.9
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 2 SSVRHPNIIHIYEVFENREKMVLVMEYAAGGELYDFL 38
S RHP+++ + + R +M+L+ +Y G L L
Sbjct: 90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL 126
>3r0m_A Llama VHH A12; IG domain, immune system; 1.50A {Lama glama} PDB:
3rjq_B* 1g9e_A 1hcv_A 1shm_A 3qxw_A 3qxv_A
Length = 143
Score = 24.8 bits (55), Expect = 1.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22
protein, T cell receptor delta, immune system; HET: NAG
MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Length = 230
Score = 24.9 bits (55), Expect = 1.9
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
A+YYC
Sbjct: 91 EAIYYC 96
>3k81_A Single strand antibody VHH domain; krepa6, single domain
antibody, immune system, RNA BIND protein; 3.40A {Lama
glama}
Length = 127
Score = 24.7 bits (55), Expect = 2.0
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 58 TAVYYCHK 65
TAVYYC+
Sbjct: 90 TAVYYCNA 97
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB:
2bse_D
Length = 123
Score = 24.7 bits (55), Expect = 2.0
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TAIYYC 96
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody,
VHH, RNAse A, yeast surface display, hydrolase/immune
system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B
2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B
2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Length = 123
Score = 24.7 bits (55), Expect = 2.0
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA YYC
Sbjct: 93 TATYYC 98
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich,
immunoglobulin fold, protein protein heteroco
alpha-beta orthogonal bundle, hydrolase-immune system
compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Length = 136
Score = 24.7 bits (55), Expect = 2.1
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
TA+Y C
Sbjct: 91 TAIYTC 96
>1dgn_A Iceberg (protease inhibitor); antiparallel six-helix bundle,
greek-KEY, hydrolase inhibitor; NMR {Homo sapiens}
SCOP: a.77.1.3
Length = 89
Score = 24.4 bits (53), Expect = 2.2
Identities = 7/45 (15%), Positives = 20/45 (44%)
Query: 14 EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQIAT 58
+ + R + + L D L + +V+++E+ ++ + T
Sbjct: 4 LLRKKRRIFIHSVGAGTINALLDCLLEDEVISQEDMNKVRDENDT 48
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate
resistance, NADP, one-carbon metabolism,
oxidoreductase, trimethoprim resistance; 1.95A {Lama
glama}
Length = 115
Score = 24.7 bits (55), Expect = 2.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 58 TAVYYCHK 65
TAVYYC K
Sbjct: 89 TAVYYCAK 96
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich,
immunoglobulin fold, protein-protein hetero C
alpha-beta orthogonal bundle, immune system-hydrolase
compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB:
1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Length = 137
Score = 24.7 bits (55), Expect = 2.2
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TAMYYC 96
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta
sandwich, immunoglobulin fold, protein-protein
heterocomplex; 1.50A {Camelus dromedarius} SCOP:
b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Length = 134
Score = 24.7 bits (55), Expect = 2.2
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TALYYC 96
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna
pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Length = 121
Score = 24.8 bits (55), Expect = 2.2
Identities = 5/11 (45%), Positives = 6/11 (54%)
Query: 58 TAVYYCHKVQD 68
TA+YYC
Sbjct: 93 TAMYYCKASGS 103
>3b9v_A Heavy chain variable domain; antibody engineering, phage display,
immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B
1fgv_H 2vh5_H*
Length = 120
Score = 24.7 bits (55), Expect = 2.3
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>3k3q_A Llama AA1 VHH domain; llama, VHH, antibody, BONT, cell junction,
cell membrane, cytoplasm, disulfide bond, hydrolase;
2.60A {Lama glama}
Length = 151
Score = 24.5 bits (54), Expect = 2.3
Identities = 5/8 (62%), Positives = 5/8 (62%)
Query: 58 TAVYYCHK 65
TA YYC
Sbjct: 105 TASYYCAA 112
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin
complex, scorpion toxin; 1.90A {Homo sapiens} PDB:
2ybr_A 1dql_H 3cfi_C
Length = 117
Score = 24.7 bits (55), Expect = 2.3
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 58 TAVYYCHK 65
TAVYYC +
Sbjct: 91 TAVYYCAR 98
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus
musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B
2uud_H*
Length = 124
Score = 24.4 bits (54), Expect = 2.4
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
T +YYC
Sbjct: 93 TGIYYC 98
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33;
antibody, camel antibody, immune system; 1.60A {Camelus
dromedarius} PDB: 1yc8_A 1yzz_A
Length = 124
Score = 24.3 bits (54), Expect = 2.5
Identities = 4/6 (66%), Positives = 5/6 (83%)
Query: 58 TAVYYC 63
T +YYC
Sbjct: 90 TGMYYC 95
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin
heavy chain domains, VHH, complementarity DET regions,
CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A*
1zv5_A
Length = 136
Score = 24.4 bits (54), Expect = 2.6
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 95 TAMYYC 100
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN;
1.94A {Lama glama} SCOP: b.1.1.1
Length = 114
Score = 24.3 bits (54), Expect = 2.6
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 90 TAVYYC 95
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating
dehydrogenase, lysine biosyn; 1.85A {Thermus
thermophilus} PDB: 3asj_A* 3ah3_A
Length = 333
Score = 24.8 bits (55), Expect = 2.7
Identities = 6/29 (20%), Positives = 11/29 (37%), Gaps = 1/29 (3%)
Query: 27 EYA-AGGELYDFLDQKKVLTEEEARRIFR 54
Y D V++++ + RI R
Sbjct: 123 LYVEQERRYLDVAIADAVISKKASERIGR 151
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein,
cytochrome C oxidase, high- resolution structure,
immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB:
1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B
1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H*
2bfv_H* 1dsf_H
Length = 127
Score = 24.4 bits (54), Expect = 2.7
Identities = 5/6 (83%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TA+YYC
Sbjct: 91 TAMYYC 96
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus
kaustophilus structural genomics, PSI; 1.74A
{Geobacillus kaustophilus} PDB: 2ic7_A
Length = 185
Score = 24.4 bits (54), Expect = 2.9
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 7/40 (17%)
Query: 17 ENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+EKM+ G LY+ D + V E ARR+ R
Sbjct: 3 SEKEKML-------AGHLYNPADLELVKERERARRLVRLY 35
>3qyc_A VH domain of IGG molecule; immunoglobulin V domain fold, antibody,
immune system; 1.60A {Homo sapiens} PDB: 1ieh_A 1ohq_A
2uzi_H*
Length = 146
Score = 24.5 bits (54), Expect = 2.9
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 58 TAVYYCHKVQD 68
TAVYYC + D
Sbjct: 93 TAVYYCVTLPD 103
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription,
multi-protein complex, DNA- binding, magnesium; 3.65A
{Schizosaccharomyces pombe}
Length = 1752
Score = 24.7 bits (53), Expect = 2.9
Identities = 10/38 (26%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 19 REKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
++ + L + G + D L +K++L+ E IF I
Sbjct: 184 KDGLRLWGSWKRGKDESD-LPEKRLLSPLEVHTIFTHI 220
>3lh2_H FV 4E10 heavy chain; epitope-scaffold, immune system; 2.65A {Homo
sapiens} PDB: 3h3p_H 3lhp_H 2xtj_D
Length = 137
Score = 24.5 bits (54), Expect = 3.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 93 TAVYYC 98
>3k1k_C Enhancer; nanobody, antibody-complex, chromophore, luminescence,
photoprotein, luminescent protein/immune system complex;
HET: GYS; 2.15A {Lama pacos} PDB: 3miq_E* 3ogo_E*
Length = 123
Score = 24.4 bits (54), Expect = 3.1
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 58 TAVYYCHK 65
TAVYYC+
Sbjct: 93 TAVYYCNV 100
>2d7t_H Anti polyhydroxybutyrate antibody FV, heavy chain; plastic,
immune system; 1.70A {Homo sapiens}
Length = 139
Score = 24.1 bits (53), Expect = 3.8
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 58 TAVYYC 63
TAVYYC
Sbjct: 91 TAVYYC 96
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for
structural genomics of infectious diseases, CSGI; 2.22A
{Salmonella typhimurium}
Length = 473
Score = 24.3 bits (52), Expect = 4.4
Identities = 7/32 (21%), Positives = 17/32 (53%), Gaps = 4/32 (12%)
Query: 37 FLDQKKVLTEEEARRIFRQIATAV----YYCH 64
F+ + +L + AR ++ + A + ++CH
Sbjct: 7 FMTEDFLLKNDIARTLYHKYAAPMPIYDFHCH 38
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum,
ATP-binding, kinase, nucleoti binding; HET: PTR DRK;
2.65A {Cryptosporidium parvum iowa II}
Length = 383
Score = 23.9 bits (52), Expect = 4.5
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 1 MSSVRHPNIIHIYEVF 16
M + H NII + + F
Sbjct: 54 MKVLDHVNIIKLVDYF 69
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix;
2.15A {Escherichia coli} SCOP: b.81.1.3
Length = 182
Score = 23.6 bits (52), Expect = 5.6
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 7/39 (17%)
Query: 18 NREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQI 56
+EKM+ GELY D+ AR++ +
Sbjct: 3 EKEKMI-------AGELYRSADETLSRDRLRARQLIHRY 34
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold,
nucleotide binding fold; 1.86A {Pectobacterium
carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Length = 345
Score = 23.7 bits (52), Expect = 5.6
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 38 LDQKKVLTEEEARRIFRQI 56
L + + +T+EE+ ++F I
Sbjct: 20 LFKSQSMTQEESHQLFAAI 38
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD;
nucleoside-phosphorylases; 2.05A {Sulfolobus
solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A
1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Length = 345
Score = 23.7 bits (52), Expect = 5.6
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 38 LDQKKVLTEEEARRIFRQI 56
L K L EA + + I
Sbjct: 10 LINKSDLEINEAEELAKAI 28
>2j7u_A RNA dependent RNA polymerase; nucleoside binding site, flavivirus,
high-throughput assay, protein; HET: PGE; 1.85A {Dengue
virus} PDB: 2j7w_A*
Length = 635
Score = 23.5 bits (50), Expect = 7.8
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 19 REKMVLVMEYAAGGELYDFLDQK 41
+ K+V V G + D + +K
Sbjct: 308 QNKVVKVQRPTPTGTVMDIISRK 330
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase
6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG
NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1
c.69.1.24
Length = 723
Score = 23.3 bits (50), Expect = 8.2
Identities = 9/63 (14%), Positives = 23/63 (36%), Gaps = 3/63 (4%)
Query: 10 IHIYEVFENREKMVLVME--YAAGGELYDFL-DQKKVLTEEEARRIFRQIATAVYYCHKV 66
+ ++ V N +++ + + Y+ D++ L I++ T Y K+
Sbjct: 39 VRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98
Query: 67 QDN 69
Sbjct: 99 PHG 101
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron
transport, mitochondrion, redox-active center, transit
peptide, transport; 1.67A {Saccharomyces cerevisiae}
Length = 121
Score = 23.1 bits (50), Expect = 8.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 25 VMEYAAGGELYDFLDQKKVLTEEEA 49
+ A GEL D L++ + L EE
Sbjct: 91 ITSMARSGELADLLEEAQALVPEEE 115
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4,
SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP:
b.85.7.1 PDB: 1mvx_A
Length = 299
Score = 23.2 bits (50), Expect = 9.7
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 11/27 (40%)
Query: 25 VMEYAAGGELYDFLDQKKVLTEEEARR 51
+ Y GE V+T EA +
Sbjct: 163 ITCYL--GE---------VITSAEAAK 178
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt
transport, TM02 hydrolase, inner membrane, membrane,
nucleotide-binding; 2.30A {Thermotoga maritima}
Length = 266
Score = 22.9 bits (50), Expect = 9.8
Identities = 4/42 (9%), Positives = 11/42 (26%)
Query: 14 EVFENREKMVLVMEYAAGGELYDFLDQKKVLTEEEARRIFRQ 55
E E + + L + ++++E
Sbjct: 224 EFLEKYDPRFFTSKMLVMRRLVLKGEDPFSMSDDELLERVCN 265
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast
activation protein alpha,fapalpha,
dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo
sapiens}
Length = 719
Score = 23.3 bits (50), Expect = 9.8
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 39 DQKKVLTEEEARRIFRQIATAVYYCHKVQDN 69
D++ V E + +++R TA YY + + +
Sbjct: 70 DRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.137 0.392
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,101,907
Number of extensions: 53614
Number of successful extensions: 893
Number of sequences better than 10.0: 1
Number of HSP's gapped: 754
Number of HSP's successfully gapped: 331
Length of query: 69
Length of database: 6,701,793
Length adjustment: 39
Effective length of query: 30
Effective length of database: 5,612,874
Effective search space: 168386220
Effective search space used: 168386220
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 51 (23.5 bits)