Query psy232
Match_columns 299
No_of_seqs 165 out of 1447
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 21:36:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy232.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/232hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pdk_A Phosphoglucosamine muta 100.0 1.2E-58 4.2E-63 445.0 21.1 264 9-299 116-466 (469)
2 3i3w_A Phosphoglucosamine muta 100.0 4.7E-58 1.6E-62 438.6 19.0 262 9-298 96-441 (443)
3 2dka_A Phosphoacetylglucosamin 100.0 1.1E-56 3.9E-61 439.0 25.7 227 66-296 215-544 (544)
4 1wqa_A Phospho-sugar mutase; a 100.0 1.2E-57 4E-62 437.7 15.8 261 9-299 96-454 (455)
5 3uw2_A Phosphoglucomutase/phos 100.0 1.6E-56 5.4E-61 431.6 19.6 262 9-298 125-477 (485)
6 2f7l_A 455AA long hypothetical 100.0 8.4E-57 2.9E-61 431.8 15.7 261 9-297 92-454 (455)
7 1p5d_X PMM, phosphomannomutase 100.0 3.1E-56 1E-60 428.8 17.8 262 9-298 103-455 (463)
8 1tuo_A Putative phosphomannomu 100.0 1.4E-54 4.7E-59 417.1 15.8 262 9-296 104-463 (464)
9 3na5_A Phosphoglucomutase; iso 100.0 4.7E-53 1.6E-57 414.5 15.9 269 9-298 165-566 (570)
10 2z0f_A Putative phosphoglucomu 100.0 9.1E-51 3.1E-55 396.1 17.6 268 9-298 125-522 (524)
11 4hjh_A Phosphomannomutase; str 100.0 3.7E-50 1.3E-54 387.9 15.1 248 9-297 103-473 (481)
12 3pmg_A Alpha-D-glucose-1,6-bis 100.0 2.8E-48 9.5E-53 380.3 6.7 200 10-232 112-370 (561)
13 1kfi_A Phosphoglucomutase 1; p 100.0 3.5E-47 1.2E-51 374.1 13.0 201 9-232 121-387 (572)
14 1wjw_A Phosphoacetylglucosamin 99.7 1.9E-16 6.5E-21 122.8 8.5 59 241-299 39-97 (112)
15 3m20_A 4-oxalocrotonate tautom 72.4 3.2 0.00011 27.2 3.2 29 270-298 1-29 (62)
16 1otf_A 4-oxalocrotonate tautom 69.0 5.4 0.00018 25.6 3.7 29 270-298 1-30 (62)
17 3ulb_A Target of rapamycin com 66.7 12 0.00041 28.3 5.6 38 260-298 78-116 (121)
18 2opa_A Probable tautomerase YW 65.7 6.9 0.00024 25.0 3.7 29 270-298 1-30 (61)
19 3ej9_A Alpha-subunit of trans- 61.9 7.4 0.00025 26.6 3.4 28 270-297 2-30 (76)
20 3ry0_A Putative tautomerase; o 59.8 10 0.00034 24.8 3.7 29 270-298 1-30 (65)
21 1gyx_A YDCE, B1461, hypothetic 57.5 8.2 0.00028 26.3 3.1 29 270-298 1-31 (76)
22 3mb2_A 4-oxalocrotonate tautom 55.8 12 0.00042 25.0 3.7 29 270-298 2-31 (72)
23 2yqr_A KIAA0907 protein; struc 55.2 29 0.001 26.1 6.0 27 269-296 72-98 (119)
24 2x4k_A 4-oxalocrotonate tautom 52.6 16 0.00054 23.1 3.7 31 268-298 2-33 (63)
25 3abf_A 4-oxalocrotonate tautom 49.7 22 0.00074 22.7 4.1 29 270-298 2-31 (64)
26 3m21_A Probable tautomerase HP 44.2 29 0.00099 22.6 4.1 29 270-298 1-33 (67)
27 2jpi_A Hypothetical protein; a 43.9 20 0.00068 27.0 3.5 44 253-298 60-103 (118)
28 3qay_A Endolysin; amidase A/B 43.1 22 0.00076 28.6 3.9 13 132-144 76-88 (180)
29 2qn6_B Translation initiation 39.5 49 0.0017 23.7 4.9 29 269-297 51-79 (93)
30 3iwh_A Rhodanese-like domain p 35.0 53 0.0018 23.5 4.6 33 66-100 55-87 (103)
31 2jvf_A De novo protein M7; tet 34.7 67 0.0023 21.8 4.6 27 271-297 49-75 (96)
32 3ej9_B Beta-subunit of trans-3 33.4 65 0.0022 21.7 4.3 28 270-297 1-29 (70)
33 1k1g_A SF1-BO isoform; splicin 32.8 69 0.0024 24.4 5.1 27 271-297 73-99 (131)
34 2npt_A Dual specificity mitoge 31.2 63 0.0022 23.2 4.1 29 139-178 60-88 (106)
35 3eme_A Rhodanese-like domain p 28.8 79 0.0027 22.1 4.6 33 66-100 55-87 (103)
36 2bl5_A MGC83862 protein, quaki 28.2 1.1E+02 0.0036 23.7 5.4 29 268-297 68-97 (140)
37 3foj_A Uncharacterized protein 26.8 75 0.0026 22.1 4.2 33 66-100 55-87 (100)
38 3leq_A Uncharacterized protein 26.1 86 0.003 23.5 4.5 44 252-295 72-116 (126)
39 3voq_A Target of rapamycin com 25.3 61 0.0021 24.6 3.4 30 266-297 91-120 (125)
40 3gk5_A Uncharacterized rhodane 24.7 73 0.0025 22.7 3.8 33 66-100 54-86 (108)
41 1qxn_A SUD, sulfide dehydrogen 24.2 1.1E+02 0.0038 22.8 5.0 34 66-100 81-114 (137)
42 2vvr_A Ribose-5-phosphate isom 24.1 47 0.0016 26.0 2.7 31 68-100 2-34 (149)
43 3szp_A Transcriptional regulat 23.5 36 0.0012 28.1 2.1 70 22-91 44-114 (291)
44 3flh_A Uncharacterized protein 23.1 1.3E+02 0.0046 21.8 5.1 33 66-100 70-104 (124)
45 3s5p_A Ribose 5-phosphate isom 23.0 49 0.0017 26.4 2.6 33 66-100 20-54 (166)
46 3ph3_A Ribose-5-phosphate isom 22.9 37 0.0013 27.2 1.9 34 65-100 18-53 (169)
47 3h7h_B Transcription elongatio 22.6 48 0.0016 24.3 2.3 29 260-291 43-71 (106)
48 1vee_A Proline-rich protein fa 22.4 94 0.0032 23.0 4.2 33 67-100 74-106 (134)
49 1wv9_A Rhodanese homolog TT165 22.1 77 0.0026 21.8 3.4 31 68-100 54-84 (94)
50 2nxc_A L11 mtase, ribosomal pr 21.9 3.2E+02 0.011 22.5 7.9 74 11-101 77-150 (254)
51 1gmx_A GLPE protein; transfera 21.0 1.2E+02 0.0042 21.2 4.4 34 66-100 57-90 (108)
52 2fsx_A RV0390, COG0607: rhodan 20.6 1.3E+02 0.0043 22.7 4.6 34 67-101 80-113 (148)
53 2ppw_A Conserved domain protei 20.5 69 0.0024 26.7 3.1 32 67-100 3-40 (216)
No 1
>3pdk_A Phosphoglucosamine mutase; 4-domain architecture, mixed A/B fold, phosphohexomutase; 2.70A {Bacillus anthracis}
Probab=100.00 E-value=1.2e-58 Score=445.05 Aligned_cols=264 Identities=22% Similarity=0.232 Sum_probs=213.3
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCccc-----------------------------ccHHHHHHHHHHHHHHhhhhh
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSRV-----------------------------FEESEYFTHFGNAYLSYQKFL 59 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~~-----------------------------~~~~~Y~~~l~~~~~~~~~~i 59 (299)
=||||||||++|||||||+++|.++++..+ +..+.|++++.+.++ .
T Consensus 116 ImITASHNP~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~~~~~~~~g~~~~~~d~~~~Y~~~l~~~~~--~--- 190 (469)
T 3pdk_A 116 VMISASHNPVQDNGIKFFGSDGFKLTDEQEAEIEALLDKEVDELPRPTGTNLGQVSDYFEGGQKYLQYIKQTVE--E--- 190 (469)
T ss_dssp EEECCTTSCTTEEEEEEEETTSSBCCHHHHHHHHHHHHSSSCCSCCCCGGGSCCEEECTHHHHHHHHHHHTTCS--S---
T ss_pred EEEEeCCCcchhCcEEEecCCCcCCCHHHHHHHHHHHhccccccCccccccCccEEEcccHHHHHHHHHHHhcC--c---
Confidence 499999999999999999999999864322 234556666655554 1
Q ss_pred hccCCCCCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCccccccCCCcEEEE
Q psy232 60 LTDNKSYSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPTGVNIKNLNNKYLS 139 (299)
Q Consensus 60 ~~~~~~~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~~l~~~~~adlGia 139 (299)
..+++|||+||+||+++.+++++|++||| +++.+|+.||| .+||++|++.+|+.+...+.. .+||+|++
T Consensus 191 ----~~~~lkivvD~~nG~~~~~~~~ll~~lG~--~v~~l~~~pDg-~f~n~~~~~~~~~~l~~~v~~----~~adlgia 259 (469)
T 3pdk_A 191 ----DFSGLHIALDCAHGATSSLAPYLFADLEA--DISTMGTSPNG-MNINDGVGSTHPEVLAELVKE----KGADIGLA 259 (469)
T ss_dssp ----CCTTCEEEEECTTSTTTTHHHHHHHHTTC--EEEEESCCCCS-SCTTSSCSTTSTHHHHHHHHH----HTCSEEEE
T ss_pred ----ccCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEECCCcCC-CCCCCCCCCCCHHHHHHHHHh----cCCcEEEE
Confidence 14689999999999999999999999999 99999999998 889999998887655544444 89999999
Q ss_pred eCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEEEecCc
Q psy232 140 VDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTSTG 219 (299)
Q Consensus 140 ~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~~G 219 (299)
|||||||+++ +|++|++ ++||++++|++.++++..+.+ ...||.|++||..+.+.+++ +|+++++|+||
T Consensus 260 ~DgDaDR~~~--vd~~G~~--l~gd~i~~Lla~~l~~~~~l~------~~~vv~tv~ss~~l~~~~~~-~G~~~~~t~tG 328 (469)
T 3pdk_A 260 FDGDGDRLIA--VDEKGNI--VDGDQIMFICAKYMKETGQLK------HNTVVSTVMSNLGFYKALEA-NGITSDKTAVG 328 (469)
T ss_dssp ECTTSSBEEE--EETTSCE--ECHHHHHHHHHHHHHHTTCSG------GGEEEEETTSCHHHHHHHHH-TTCEEEEECSS
T ss_pred ECCCCCeEEE--ECCCCcE--EChhHHHHHHHHHHHHhCCCC------CCeEEEeecCcHHHHHHHHH-cCCEEEEEcCc
Confidence 9999999988 9999955 999999999999998763101 13588776666676666666 89999999999
Q ss_pred hHHHHHHHHhCCcc--------------------------------c-------------------------ccccccCC
Q psy232 220 VKHLHHEALKYDTI--------------------------------N-------------------------ADTEIVEP 242 (299)
Q Consensus 220 ~k~i~~~~~~~~~i--------------------------------~-------------------------~~~~~~~~ 242 (299)
+|||+++|.+.+++ . .+..++..
T Consensus 329 ~k~i~~~m~~~~~~~ggE~SG~~~~~~~~~~~Dgi~aal~~le~l~~~g~~Lsel~~~l~~~~~~~~~v~~~~k~~~~~~ 408 (469)
T 3pdk_A 329 DRYVMEEMKRGGYNLGGEQSGHIILLDYITTGDGMLSALQLVNIMKMTKKPLSELAGEMTKFPQLLVNVRVTDKKLALEN 408 (469)
T ss_dssp HHHHHHHHHHHTCCEEECTTSBEEETTTCSSCCHHHHHHHHHHHHHHHTCCHHHHHTTSCCCCEEEEEECCSCHHHHTTC
T ss_pred hHHHHHHHhhcCCeEEEcccCCEecCCCCCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHhhcCceEEEEecCchhhhhcc
Confidence 99999999987641 0 00011111
Q ss_pred hhhhhHHHHhhhhc-CCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhhC
Q psy232 243 LGMQDSINKSVAKF-NNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTYL 299 (299)
Q Consensus 243 ~~~~~~iDGik~~~-~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~~ 299 (299)
...++.+++++..+ ++||+|||||||||++|||+||+|++.++++++++.++|++.+
T Consensus 409 ~~~~~~i~~~~~~~~~~gw~lvRpSgTEP~lRv~~Ea~~~~~~~~l~~~~~~~i~~~~ 466 (469)
T 3pdk_A 409 EKIKEIIRVVEEEMNGDGRILVRPSGTEPLIRVMAEAPTQEVCDAYVHRIVEVVKAEV 466 (469)
T ss_dssp HHHHHHHHHHHHHCCSSCEEEEECCSSSCCEEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHheEeCCCcEEEEEeCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHh
Confidence 23456788887766 6899999999999999999999999999999999999998753
No 2
>3i3w_A Phosphoglucosamine mutase; csgid, IDP02164, isomerase, magne metal-binding, phosphoprotein, structural genomics; HET: SEP; 2.30A {Francisella tularensis subsp}
Probab=100.00 E-value=4.7e-58 Score=438.57 Aligned_cols=262 Identities=23% Similarity=0.276 Sum_probs=214.7
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCcc--------------------------cccHHHHHHHHHHHHHHhhhhhhcc
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSR--------------------------VFEESEYFTHFGNAYLSYQKFLLTD 62 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~--------------------------~~~~~~Y~~~l~~~~~~~~~~i~~~ 62 (299)
=||||||||++|||||||+++|.++++.. .+..+.|++++.+.++. .+.
T Consensus 96 ImITASHNP~~~NGiK~~~~~G~~l~~~~~~~Ie~~~~~~~~~~~~~~~g~~~~~~d~~~~Y~~~l~~~~~~---~i~-- 170 (443)
T 3i3w_A 96 FVITASHNKFTDNGIKLFSSNGFKLDDALEEEVEDMIDGDFIYQPQFKFGSYKILANAIDEYIESIYSRFAK---FVN-- 170 (443)
T ss_dssp EEECCTTSCTTEEEEEEEETTSCBCCHHHHHHHHHHHTSCCCCCTTSCCCCEEECTTTTHHHHHHHHHHHTT---TCC--
T ss_pred EEEEECCCCchhCeEEEEcCCCCcCCHHHHHHHHHHHhccccccccccCccEEEChhHHHHHHHHHHHhCch---hhc--
Confidence 49999999999999999999999885321 24667999999988872 122
Q ss_pred CCCCCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCccccccCCCcEEEEeCC
Q psy232 63 NKSYSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPTGVNIKNLNNKYLSVDG 142 (299)
Q Consensus 63 ~~~~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~~l~~~~~adlGia~Dg 142 (299)
.++ |||+||+||+++.+++++|++||| +++.+|+.||| .+||++|++.+|+.+...+.. .+||+|++|||
T Consensus 171 --~~~-kivvD~~nG~~~~~~~~ll~~lG~--~v~~~~~~pDg-~f~n~~~~~~~~~~l~~~v~~----~~adlgia~Dg 240 (443)
T 3i3w_A 171 --YKG-KVVVDCAHGAASHNFEALLDKFGI--NYVSIASNPDG-LNINVGCGATCVSNIKKAVKE----QKADLGISLDG 240 (443)
T ss_dssp --CCS-EEEEECTTSTTTTHHHHHHHHTTC--EEEESSCCCCS-SCTTTTCSTTCHHHHHHHHHH----HTCSEEEEECT
T ss_pred --cCC-eEEEECCCChHHHHHHHHHHHcCC--EEEEECCccCC-CCCCCCCCCCCHHHHHHHHHh----cCCcEEEEECC
Confidence 357 999999999999999999999999 99999999998 889999999887655444444 89999999999
Q ss_pred CCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEEEecCchHH
Q psy232 143 DADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTSTGVKH 222 (299)
Q Consensus 143 DgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~~G~k~ 222 (299)
||||+++ +|++|+ +++||++++|++.++++.. +. ..||.|++||..+.+.+++ +|+++++|+||+||
T Consensus 241 DaDR~~~--vd~~G~--~l~gd~i~~lla~~l~~~~--~~------~~vv~tv~ss~~l~~~~~~-~G~~~~~t~~G~k~ 307 (443)
T 3i3w_A 241 DADRIII--VDENGQ--EIDGDGILNILAQYSDICG--GT------NGIVGTQMTNMSYENHYRA-NKIPFIRSKVGDRY 307 (443)
T ss_dssp TSCBEEE--ECTTSC--EECHHHHHHHHHHTTTTTT--CC------SCEEEETTSCHHHHHHHHH-TTCCEEEESSSTTH
T ss_pred CCceEEE--ECCCCc--EeChhHHHHHHHHHHHHhC--CC------CeEEEeecCchHHHHHHHH-CCCeEEEEeChHHH
Confidence 9999998 999995 5999999999999987653 11 4788888878777777776 89999999999999
Q ss_pred HHHHHHhCCcc--------------------------------cccc-----------------cc--------cCChhh
Q psy232 223 LHHEALKYDTI--------------------------------NADT-----------------EI--------VEPLGM 245 (299)
Q Consensus 223 i~~~~~~~~~i--------------------------------~~~~-----------------~~--------~~~~~~ 245 (299)
++++|.+.+++ ...+ .+ .+....
T Consensus 308 i~~~m~~~~~~~ggE~SG~~~~~~~~~~~Dgi~a~l~~le~l~~~g~~Lsel~~~~~~~p~~~~~v~~~~~~~~~~~~~~ 387 (443)
T 3i3w_A 308 VLEDLVKYGYKIGGESSGHVINLNFGTTGDGLFTAIQLLAIFSQADKPVSEFKLQGELMQQTLINVPLTKKVAREDLQKV 387 (443)
T ss_dssp HHHHHHHHTCCEEECTTSBEEETTTCSSCCHHHHHHHHHHHTTTCSSCGGGTSCSSCCCEEEEEEEECSSCCCHHHHHTT
T ss_pred HHHHHhhcCcEEEEEeeCcEEEcCcCcCCCHHHHHHHHHHHHHHcCCCHHHHHHhhhhhcceEEEEEcCcccchhhHHHH
Confidence 99999987641 0000 00 001233
Q ss_pred hhHHHHhhhhc-CCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhh
Q psy232 246 QDSINKSVAKF-NNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 246 ~~~iDGik~~~-~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
++.++.....+ ++||+|||||||||++|||+||+|++.++++++++.++|++.
T Consensus 388 ~~~i~~~~~~~~~~gw~lvR~SgTEP~~rv~~Ea~~~~~~~~l~~~~~~~i~~~ 441 (443)
T 3i3w_A 388 ASDVNDVEKRLGNRGRVLLRPSGTEPVLRVMVEADDKSLATNEAEYLVEKVKQK 441 (443)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEETTEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEecCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHh
Confidence 45566654444 579999999999999999999999999999999999999875
No 3
>2dka_A Phosphoacetylglucosamine mutase; isomerase; 1.93A {Candida albicans} PDB: 2dkc_A* 2dkd_A*
Probab=100.00 E-value=1.1e-56 Score=438.97 Aligned_cols=227 Identities=48% Similarity=0.784 Sum_probs=185.6
Q ss_pred CCCeEEEcCCCCCcHHHHHHH-HHHc--CCCceEEEEcccc-CCCCCCCCCCCCCCCcccccCCccccccCCCcEEEEeC
Q psy232 66 YSQDIYFDGANGVGGVKIKEL-QKII--ESKLKIEVYNQDV-TTQGKLNFQCGADFAKTKKIVPTGVNIKNLNNKYLSVD 141 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~~~~~l-l~~l--g~~~~v~~ln~~~-d~~~~~n~~~g~~~p~~~~~~~~~l~~~~~adlGia~D 141 (299)
+++||++||+||+++.+++++ |++| |+ +++.+|+.| |+ .+||++||++||..+.+.|+.+.. ..+|+|+|||
T Consensus 215 ~~lkIvvD~~nGag~~~~~~i~l~~L~~G~--~v~~ln~~~dd~-~~~n~~~~~~~~~~~~~~~~~~~~-~~aDlGiA~D 290 (544)
T 2dka_A 215 EKIDITIDAANGVGAPKIQELLEKYLHKEI--SFTVVNGDYKQP-NLLNFDCGADYVKTNQKLPKNVKP-VNNKLYASFD 290 (544)
T ss_dssp CCEEEEEECTTSTHHHHHHHHHHHHSTTTE--EEEEESCCTTCG-GGTTSSCSHHHHHHHCSCCTTCCC-CBTCCEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhcCCc--eEEEEcCcCCCC-CcCCCCCCccchhhhhhhhhhhhc-ccccEEEEEC
Confidence 469999999999999999999 9999 88 999999999 66 899999999999877777777665 7799999999
Q ss_pred CCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCC-cccCCceEEeeeeChhHHHHHHHhCCCeEEEecCch
Q psy232 142 GDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLK-DKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTSTGV 220 (299)
Q Consensus 142 gDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~-~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~~G~ 220 (299)
|||||++++++|++|+|++++||++++|++.++++.....+.+ -.++.++|+|+++|+.+.+++++.+|+++++|+||+
T Consensus 291 gDaDR~~iv~~D~~G~~~~l~gd~i~aLla~~l~~~~~~~~~~~~~~~~~vv~tv~sn~~~~~~i~~~~G~~v~~t~vG~ 370 (544)
T 2dka_A 291 GDADRLICYYQNNDNKFKLLDGDKLSTLFALFLQQLFKQIDPTKISLNIGVVQTAYANGSSTKYVEDVLKIPVRCTPTGV 370 (544)
T ss_dssp TTSCCEEEEEECTTSCEEEECHHHHHHHHHHHHHHHHTTSCTTTCCCCEEEEECTTSCHHHHHHHHHTSCCCEEECCSSH
T ss_pred CCCCceEEEEEcCCCCeEEeCHHHHHHHHHHHHHHhcccCCCcccccCCcEEEEeccccHHHHHHHHHcCCceEEEeCcH
Confidence 9999999944499998888999999999999998874111100 012347898989999999999987899999999999
Q ss_pred HHHHHHHHhCCc------------c--cc---------------------------------------------------
Q psy232 221 KHLHHEALKYDT------------I--NA--------------------------------------------------- 235 (299)
Q Consensus 221 k~i~~~~~~~~~------------i--~~--------------------------------------------------- 235 (299)
||++++|.+.++ + +.
T Consensus 371 k~v~~~m~~~~~~~ggE~sGhg~~if~~~~~~~~~~~~~~~~~~kd~~~~~~~~~~l~a~~tgd~l~~~l~vl~~~~~~g 450 (544)
T 2dka_A 371 KHLHHEAENFDIGVYFEANGHGTVIFNPEAEKKIFDYKPNNDNEAKAIKVLQNFSQLINQTVGDAISDLLAVLIVVHYLK 450 (544)
T ss_dssp HHHHHHHTTSSEEEEECTTSCEEEEECHHHHHHHHHCCCSSHHHHHHHHHHHHHHHHSCSSSCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCcEEEcccCCeeEEECchhhhhhcccccCChhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHhC
Confidence 999999987532 0 00
Q ss_pred ------------------------cc---------cccCChhhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEeCCHH
Q psy232 236 ------------------------DT---------EIVEPLGMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEAETSE 282 (299)
Q Consensus 236 ------------------------~~---------~~~~~~~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea~~~~ 282 (299)
+. .+.++...++.+||+|+.+++||+|||||||||++|||+||.|++
T Consensus 451 ~~lsel~~~~~~~p~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~iDGv~~~~~~gw~lvRpSGTEP~lRvy~Ea~~~e 530 (544)
T 2dka_A 451 LSPSDWDNEYTDLPNKLVKVIVPDRSIFKTTNAERTLVEPKGMQDEIDKLVAQYPNGRSFVRASGTEDAVRVYAEADTQN 530 (544)
T ss_dssp CCHHHHHTTSCCCCEEEEEC-------CCCCTTTC-CC-CTTHHHHHHHHHTTSTTCEEEEEEC----CEEEEEECSSHH
T ss_pred CCHHHHHhhhhccCchhhccccchhhhhhHHHhhhhhcCchhhhcccceEEEEcCCEEEEEEcCCCCCEEEEEEEeCCHH
Confidence 00 011223457899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy232 283 DVNALTEEIQQVVK 296 (299)
Q Consensus 283 ~~~~l~~~~~~~v~ 296 (299)
.++++++++.++|+
T Consensus 531 ~~~~l~~~~~~~v~ 544 (544)
T 2dka_A 531 NVEELSKAVSELVK 544 (544)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998873
No 4
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-57 Score=437.70 Aligned_cols=261 Identities=18% Similarity=0.146 Sum_probs=210.1
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCcc--------------------------cccHHHHHHHHHHHHHHhhhhhhcc
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSR--------------------------VFEESEYFTHFGNAYLSYQKFLLTD 62 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~--------------------------~~~~~~Y~~~l~~~~~~~~~~i~~~ 62 (299)
=||||||||++|||||||+++|.+++++. .+..+.|++++.+.++. +.+.
T Consensus 96 imITASHNP~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~~~~g~~~~~~~~~~Y~~~l~~~~~~--~~~~-- 171 (455)
T 1wqa_A 96 AVITASHNPPEYNGIKLLEPNGMGLKKEREAIVEELFFKEDFDRAKWYEIGEVRREDIIKPYIEAIKSKVDV--EAIK-- 171 (455)
T ss_dssp EEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHHHHHHHTCCCCCCGGGCCCEEECCCHHHHHHHHHTTSCH--HHHH--
T ss_pred EEEEeCCCChHHCeEEEEcCCCCcCCHHHHHHHHHHHhcCCcccCCccCCcceeccchHHHHHHHHHhhCCh--hhcc--
Confidence 49999999999999999999999985422 24567888888877652 2222
Q ss_pred CCCCCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCcccccc------CCCcE
Q psy232 63 NKSYSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPTGVNIK------NLNNK 136 (299)
Q Consensus 63 ~~~~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~~l~~~------~~adl 136 (299)
.+++|||+||+||+++.+++++|++||| +++.+|+.||| .++|+ .| .|.++++..+ .++|+
T Consensus 172 --~~~lkivvd~~nG~~~~~~~~~l~~lG~--~v~~~~~~pdg-~f~~~-----~~---~p~~~~l~~l~~~v~~~~adl 238 (455)
T 1wqa_A 172 --KRKPFVVVDTSNGAGSLTLPYLLRELGC--KVITVNAQPDG-YFPAR-----NP---EPNEENLKEFMEIVKALGADF 238 (455)
T ss_dssp --HHCCEEEEECTTSGGGGTHHHHHHHHTC--EEEEESCSCCT-TCSSS-----CS---CCCTTTTHHHHHHHHHHTCSE
T ss_pred --cCCCEEEEECCCccHHHHHHHHHHHcCC--EEEEECCcCCC-CCCCC-----CC---CCchhHHHHHHHHHHHcCCCE
Confidence 2579999999999999999999999999 99999999998 54422 22 2333333322 78999
Q ss_pred EEEeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEEEe
Q psy232 137 YLSVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFT 216 (299)
Q Consensus 137 Gia~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t 216 (299)
|++|||||||+++ +|++|+ +++||++++|+++++++.. ++ ..||.|++||..+.+.+++ +|+++++|
T Consensus 239 gia~DgDaDR~~~--vd~~G~--~l~gd~i~~lla~~l~~~~--~~------~~vv~tv~ss~~l~~~a~~-~g~~~~~t 305 (455)
T 1wqa_A 239 GVAQDGDADRAVF--IDENGR--FIQGDKTFALVADAVLKEK--GG------GLLVTTVATSNLLDDIAKK-HGAKVMRT 305 (455)
T ss_dssp EEEECTTSCCEEE--EETTSC--BCCHHHHHHHHHHHHHHHH--TS------CEEEEETTSCTHHHHHHHH-TTCEEEEE
T ss_pred EEEECCCCCeEEE--EeCCCC--EEChhHHHHHHHHHHHHhC--CC------CeEEEeecCcHHHHHHHHH-CCCEEEEE
Confidence 9999999999998 999995 4999999999999998874 22 5788888888777666666 89999999
Q ss_pred cCchHHHHHHHHhCCcc----------------------------------------------------------ccccc
Q psy232 217 STGVKHLHHEALKYDTI----------------------------------------------------------NADTE 238 (299)
Q Consensus 217 ~~G~k~i~~~~~~~~~i----------------------------------------------------------~~~~~ 238 (299)
+||+||+.++|.+.+++ +.+..
T Consensus 306 ~tG~k~i~~~m~~~~~~~ggE~sgg~~~~~~~~~~Dgi~a~l~~le~l~~~g~~L~~~~~~l~~~~~~~~~v~~~~~~~~ 385 (455)
T 1wqa_A 306 KVGDLIVARALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFAKSGKKFSELIDELPKYYQIKTKRHVEGDRHA 385 (455)
T ss_dssp CSSTTHHHHHHHHTTCSEEEETTEEEECTTTCSSCCHHHHHHHHHHHHHHHCSCHHHHHHTSCCCEEEEECCBCCSSHHH
T ss_pred cCcHHHHHHHHHhCCceEEEcCcCcEEECCcCcCccHHHHHHHHHHHHHhcCCCHHHHHHhcccccEeeEeeEcCcHHHH
Confidence 99999999999987751 00000
Q ss_pred ccC------Ch--hhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhhC
Q psy232 239 IVE------PL--GMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTYL 299 (299)
Q Consensus 239 ~~~------~~--~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~~ 299 (299)
+++ +. ..++.+||+|+.+++||++||||||||++|||+|+.+++.++++++++.++|++++
T Consensus 386 ~~~~l~~~~~~~~~~~~~~DGlr~~~~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~l~~~~~~~i~~~~ 454 (455)
T 1wqa_A 386 IVNKVAEMARERGYTVDTTDGAKIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKAL 454 (455)
T ss_dssp HHHHHHHHHHHTTCEEECTTSEEEECSSCEEEECCCSSSSBCCEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhHhhccccccCceEEEEecCcEEEEEeCCCCceEEEEEEECCHHHHHHHHHHHHHHHHHhh
Confidence 111 01 23456899999999999999999999999999999999999999999999998763
No 5
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=1.6e-56 Score=431.58 Aligned_cols=262 Identities=14% Similarity=0.155 Sum_probs=210.7
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCccc----------------------ccHHHHHHHHHHHHHHhhhhhhccCCCC
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSRV----------------------FEESEYFTHFGNAYLSYQKFLLTDNKSY 66 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~~----------------------~~~~~Y~~~l~~~~~~~~~~i~~~~~~~ 66 (299)
=||||||||++|||||||+ +|.++++... +..+.|++++.+.++ . .+
T Consensus 125 ImITASHNP~~~NGiK~~~-~G~~i~~~~~~~I~~~~~~~~~~~~~g~~~~~d~~~~Yi~~l~~~i~--~--------~~ 193 (485)
T 3uw2_A 125 IVVTGSHNPPDYNGFKMVL-RGAAIYGDQIQGLYKRIVDARFETGSGSYEQYDVADQYVERIVGDIK--L--------TR 193 (485)
T ss_dssp EEECCTTSCTTEEEEEEEE-TTEECCTHHHHHHHHHHHTTCCCCCCCCEEECCCHHHHHHHHHTTCC--C--------SS
T ss_pred EEEEeCCCCcccceEEEec-CCCCCCHHHHHHHHHHHhcCCcccCCceEEecchHHHHHHHHHHhcC--c--------cc
Confidence 4999999999999999997 6888765332 455677777766554 1 25
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCccccccCCCcEEEEeCCCCCe
Q psy232 67 SQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPTGVNIKNLNNKYLSVDGDADR 146 (299)
Q Consensus 67 ~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~~l~~~~~adlGia~DgDgDR 146 (299)
++|||+||+||+++.+++++|++||| +++.+|+.||| .|+|+.|++..|+.+....+.++. .+||+|++|||||||
T Consensus 194 ~lkIvvD~~~Ga~~~~~~~il~~lG~--~v~~~~~~pDg-~Fp~~~p~P~~~~~l~~l~~~v~~-~~aDlgia~DgDaDR 269 (485)
T 3uw2_A 194 PLKLVVDAGNGVAGPLATRLFKALGC--ELVELFTDIDG-NFPNHHPDPAHPENLQDVIAKLKA-TDAEIGFAFDGDGDR 269 (485)
T ss_dssp CCCEEEECTTSTHHHHHHHHHHHTTC--CEEEESCSCCT-TCCSSCSCTTSGGGGHHHHHHHHH-SSCCEEEEECTTSSC
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHcCC--eEEEecCccCC-CCCCCCcCCCCHHHHHHHHHHHHh-hCCCEEEEECCCCCe
Confidence 79999999999999999999999999 99999999998 778876555544333222122222 899999999999999
Q ss_pred eEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEEEecCchHHHHHH
Q psy232 147 IIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTSTGVKHLHHE 226 (299)
Q Consensus 147 ~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~~G~k~i~~~ 226 (299)
+++ +|++|++ ++||++++|++.++++.. ++ ..||.+++||..+.+.+++ +|+++++|+||+|||.++
T Consensus 270 ~~v--vd~~G~~--i~gd~~~alla~~ll~~~--~~------~~vv~~v~ss~~l~~~~~~-~g~~~~~t~vG~k~i~~~ 336 (485)
T 3uw2_A 270 LGV--VTKDGQI--IYPDRQLMLFAEEVLSRN--PG------AQIIYDVKCTRNLARWVRE-KGGEPLMWKTGHSLVKAK 336 (485)
T ss_dssp EEE--ECTTSCB--CCHHHHHHHHHHHHHHHS--TT------CEEEEETTSCTHHHHHHHH-TTCEEEEECSSHHHHHHH
T ss_pred EEE--EeCCCce--ECHHHHHHHHHHHHHHhC--CC------CeEEEEeCCcHHHHHHHHH-cCCEEEEEcCChHHHHHH
Confidence 998 9999954 999999999999998864 33 4688888888888888888 799999999999999999
Q ss_pred HHhCCcc---------------------------------------------cc-----cc----------cccC-----
Q psy232 227 ALKYDTI---------------------------------------------NA-----DT----------EIVE----- 241 (299)
Q Consensus 227 ~~~~~~i---------------------------------------------~~-----~~----------~~~~----- 241 (299)
|.+.+++ .+ +. .+++
T Consensus 337 m~~~~~~~ggE~SG~~~f~~~~~~~~Dgi~aal~lle~la~~~~lsel~~~lp~~~~~~~~~v~~~~~~~~~~~~~l~~~ 416 (485)
T 3uw2_A 337 LRETGAPLAGEMSGHVFFKDRWYGFDDGLYTGARLLEILARVADPSALLNGLPNAVSTPELQLKLEEGENVKLIDKLRAD 416 (485)
T ss_dssp HHHHCCSEEECTTSCEEETTTTCSSBCHHHHHHHHHHHHTTSSCHHHHHHTSCCCEECCCEEC------CTHHHHHHHHS
T ss_pred HHhhcccceecccCcEeeccccCCCCcHHHHHHHHHHHHHhcCCHHHHHHHhhHhhCCceEEEeCCchhHHHHHHHHHhh
Confidence 9986530 00 00 0000
Q ss_pred -C---hhhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhh
Q psy232 242 -P---LGMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 242 -~---~~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
+ ...++.+||+|+.+++||+|||||||||++|||+||+|++.++++++++.++|+++
T Consensus 417 ~~~~~~~~~~~~DGvrv~~~~gwvlvRpSgTEP~lrv~~Ea~~~~~~~~l~~~~~~~i~~~ 477 (485)
T 3uw2_A 417 AKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRRALKAA 477 (485)
T ss_dssp CCCTTCSEEECSSSEEEEETTEEEEEEECSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccccceEEEEeCCcEEEEEecCCCCeEEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 0 01245789999999999999999999999999999999999999999999999864
No 6
>2f7l_A 455AA long hypothetical phospho-sugar mutase; phosphomannomutase, phosphoglucomutase, isomerase; 2.80A {Sulfolobus tokodaii}
Probab=100.00 E-value=8.4e-57 Score=431.80 Aligned_cols=261 Identities=20% Similarity=0.192 Sum_probs=205.9
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCcc----------------------------cccHHHHHHHHHHHHHHhhhhhh
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSR----------------------------VFEESEYFTHFGNAYLSYQKFLL 60 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~----------------------------~~~~~~Y~~~l~~~~~~~~~~i~ 60 (299)
=||||||||++|||||||+++|.+++++. .+..+.|++++.+.++ .+.+.
T Consensus 92 ImITASHNP~~~NGiK~~~~~G~~~~~~~~~~I~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~Y~~~l~~~~~--~~~i~ 169 (455)
T 2f7l_A 92 VVITASHNPAPYNGIKVVDKDGIEIRREKENEIEDLFFTERFNTIEWSSLTTEVKREDRVISTYVNGILSHVD--IEKIK 169 (455)
T ss_dssp EEECCTTSCTTEEEEEEECTTSSBCCHHHHHHHHHHHHHTCCCCCCGGGCCCCCEECCCHHHHHHHHHHTTSC--HHHHH
T ss_pred EEEEcCCCChHHCEEEEECCCCCCCCHHHHHHHHHHHhcCCCCcCchhcCCceeecccchHHHHHHHHHhhcC--hhhcc
Confidence 49999999999999999999999885321 1345688888887765 22222
Q ss_pred ccCCCCCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCcccccc------CCC
Q psy232 61 TDNKSYSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPTGVNIK------NLN 134 (299)
Q Consensus 61 ~~~~~~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~~l~~~------~~a 134 (299)
.+++|||+||+||+++.+++++|++||| +++.+|+.||| .++++. |. |.++++..+ .+|
T Consensus 170 ----~~~lkivvd~~~G~~~~~~~~~l~~lG~--~v~~~~~~pDg-~F~~~~-----p~---p~~~~l~~l~~~v~~~~a 234 (455)
T 2f7l_A 170 ----KKNYKVLIDPANSVGALSTPLVARALGC--KIYTINGNLDP-LFSARQ-----PE---PTFDSLKETAEVVKTLKV 234 (455)
T ss_dssp ----HHCCEEEEECTTTGGGGTHHHHHHHTTC--EEEEBSCSCCT-TCTTSC-----SS---CCTTTSHHHHHHHHHTTC
T ss_pred ----cCCCEEEEECCCchHHHHHHHHHHHcCC--EEEEECCcCCC-CCCCCC-----cC---cchHHHHHHHHHHHHcCC
Confidence 2589999999999999999999999999 99999999998 555432 22 122222222 889
Q ss_pred cEEEEeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEE
Q psy232 135 NKYLSVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVI 214 (299)
Q Consensus 135 dlGia~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~ 214 (299)
|+|++|||||||+++ +|++|+ +++||++++|+++++++... . .+..||.+.+||..+.+.+++ +|++++
T Consensus 235 dlgia~DgDaDR~~~--vd~~g~--~l~gd~i~~lla~~l~~~~~--~----~~~~vv~tv~ss~~l~~~a~~-~g~~~~ 303 (455)
T 2f7l_A 235 DLGVAHDGDADRAIF--IDSEGR--VQWGDRSGTLLSYWASVKNP--K----AIKKIVTAVSSSSLVEEYLSK-YNIQVD 303 (455)
T ss_dssp SEEEECCTTSCCCEE--EETTSC--BCCHHHHHHHHHHHHHHTCT--T----SCSEEEEETTSCTHHHHHHHT-TTCEEE
T ss_pred CEEEEECCCCCeEEE--EcCCCe--EEChHHHHHHHHHHHHHhCc--c----CCCeEEEEecccHHHHHHHHH-cCCEEE
Confidence 999999999999998 999994 59999999999999987631 1 125688787777766555555 899999
Q ss_pred EecCchHHHHHHHHhCCcc----------------------------------------------------------c-c
Q psy232 215 FTSTGVKHLHHEALKYDTI----------------------------------------------------------N-A 235 (299)
Q Consensus 215 ~t~~G~k~i~~~~~~~~~i----------------------------------------------------------~-~ 235 (299)
+|+||+||+.++|.+.+++ + .
T Consensus 304 ~t~~G~k~i~~~m~~~~~~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~le~~a~~g~~L~ell~~~~~~~~~~~~v~~~~~~ 383 (455)
T 2f7l_A 304 WTKVGSVDIAHKVADENALAGFEENGGFMYPPHQYVRDGAMSFALMLELLANENVSSAELFDRLPKYYLVKTKVDLKPGL 383 (455)
T ss_dssp EECSCHHHHHHHHHHTTCSEEEETTEEEEBTTTBSSCCHHHHHHHHHHHHHHHTCCHHHHHHTSCCCEEEEEEEECCTTC
T ss_pred EEcCcHHHHHHHHHhcCcEEEEcCcCcEEECCcCCCCCHHHHHHHHHHHHHhhCCCHHHHHHhCCCCeeeeEeEEcCcHH
Confidence 9999999999999987751 0 0
Q ss_pred cc-cccC------C--hhhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHh
Q psy232 236 DT-EIVE------P--LGMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKT 297 (299)
Q Consensus 236 ~~-~~~~------~--~~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~ 297 (299)
+. .+++ + ...++.+||+|+.+++||++||||||||++|||+|+.|++.++++++++.++|++
T Consensus 384 ~~~~~~~~l~~~~~~~~~~~~~~DGlr~~~~~gw~lvRpSgTEP~irvy~Ea~~~~~~~~~~~~~~~~i~~ 454 (455)
T 2f7l_A 384 MVEEIYKKILEVYSTSSVKAITIDGVKIIGKDFWFLVRKSGTEPIIRIMAEAKDENVANNLVNELKKIVEG 454 (455)
T ss_dssp CHHHHHHHHHHHHCCTTSEEECSSSEEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhchhcccccccCceEEEEeCCcEEEEeeCCCCcEEEEEEEECCHHHHHHHHHHHHHHHhc
Confidence 00 1111 0 1235568999999999999999999999999999999999999999999998864
No 7
>1p5d_X PMM, phosphomannomutase; alpha/beta protein, phosphohexomutase, phosphoserine, enzyme complex, enzyme-metal complex, isomerase; HET: SEP G1P; 1.60A {Pseudomonas aeruginosa} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1k35_A* 1p5g_X* 1pcj_X* 1pcm_X* 1k2y_X* 2h5a_X* 2h4l_X* 2fkf_A* 3rsm_A 3bkq_X* 3c04_A* 2fkm_X*
Probab=100.00 E-value=3.1e-56 Score=428.75 Aligned_cols=262 Identities=17% Similarity=0.191 Sum_probs=209.0
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCcccc----------------------cHHHHHHHHHHHHHHhhhhhhccCCCC
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSRVF----------------------EESEYFTHFGNAYLSYQKFLLTDNKSY 66 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~~~----------------------~~~~Y~~~l~~~~~~~~~~i~~~~~~~ 66 (299)
=||||||||++|||||||+ +|.++++..+. ..+.|++++.+.++ . .+
T Consensus 103 ImITASHNP~~~NGiK~~~-~G~~i~~~~~~~I~~~~~~~~~~~~~g~~~~~d~~~~Y~~~l~~~~~--~--------~~ 171 (463)
T 1p5d_X 103 VMLTGSHNPPDYNGFKIVV-AGETLANEQIQALRERIEKNDLASGVGSVEQVDILPRYFKQIRDDIA--M--------AK 171 (463)
T ss_dssp EEECCTTSCTTEEEEEEEE-TTEECCTHHHHHHHHHHHHTCCCCBCCEEEECCCHHHHHHHHHTTCC--C--------SS
T ss_pred EEEccCCCCcccceEEEEC-CCccCCHHHHHHHHHHHhcCCcccCCCceecCChHHHHHHHHHhhhc--c--------cC
Confidence 4999999999999999999 99998865433 34455555554433 1 15
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCccccccCCCcEEEEeCCCCCe
Q psy232 67 SQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPTGVNIKNLNNKYLSVDGDADR 146 (299)
Q Consensus 67 ~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~~l~~~~~adlGia~DgDgDR 146 (299)
++|||+||+||+++.+++++|++||| +++.+|+.||| .++|+.|++..|+.+..+.+.+.. .++|+|++|||||||
T Consensus 172 ~lkivvD~~nG~~~~~~~~ll~~lG~--~v~~~~~~pDg-~f~~~~p~p~~~~~l~~l~~~v~~-~~adlgia~DgDaDR 247 (463)
T 1p5d_X 172 PMKVVVDCGNGVAGVIAPQLIEALGC--SVIPLYCEVDG-NFPNHHPDPGKPENLKDLIAKVKA-ENADLGLAFDGDGDR 247 (463)
T ss_dssp CEEEEEECTTSGGGGTHHHHHHHHHE--EEEEESCSCCT-TCCSSCSCTTSGGGGHHHHHHHHH-TTCSEEEEECTTSSB
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCC--eEEEEeCccCC-CCCCCCcCCCCHHHHHHHHHHHHH-hCCCEEEEECCCCCe
Confidence 89999999999999999999999999 99999999998 888887765544333222222222 889999999999999
Q ss_pred eEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEEEecCchHHHHHH
Q psy232 147 IIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTSTGVKHLHHE 226 (299)
Q Consensus 147 ~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~~G~k~i~~~ 226 (299)
+++ +|++|+ +++||++++|++.++++.. ++ ..||.+++||..+.+.+++ +|+++++|+||+||+.++
T Consensus 248 ~~~--vd~~G~--~l~gd~i~~L~a~~l~~~~--~~------~~vv~~v~ss~~l~~~~~~-~g~~~~~t~tG~k~i~~~ 314 (463)
T 1p5d_X 248 VGV--VTNTGT--IIYPDRLLMLFAKDVVSRN--PG------ADIIFDVKCTRRLIALISG-YGGRPVMWKTGHSLIKKK 314 (463)
T ss_dssp EEE--EETTCC--EECHHHHHHHHHHHHHHHS--TT------CEEEEETTSCTHHHHHHHH-TTCEEEEECSSHHHHHHH
T ss_pred EEE--EeCCCc--EeCHHHHHHHHHHHHHHhC--CC------CeEEEEecCcHHHHHHHHH-cCCEEEEeCCcHHHHHHH
Confidence 999 999994 5999999999999998863 22 4788887878777777766 899999999999999999
Q ss_pred HHhCCcc----------------------------------------------cc-----cc----------cccC----
Q psy232 227 ALKYDTI----------------------------------------------NA-----DT----------EIVE---- 241 (299)
Q Consensus 227 ~~~~~~i----------------------------------------------~~-----~~----------~~~~---- 241 (299)
|.+.+++ .+ +. .+++
T Consensus 315 m~~~~~~~ggE~sG~~~~~~~~~~~~Dgi~aal~~le~~a~~g~~Ls~ll~~l~~~~~~~~~~v~~~~~~~~~~~~~l~~ 394 (463)
T 1p5d_X 315 MKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQR 394 (463)
T ss_dssp HHHHCCSEEECTTSBEEETTTTCSSBCHHHHHHHHHHHHHTCSSCHHHHHHTSCCCEECCCEEEECCTTTHHHHHHHHHH
T ss_pred HHhcCCceeecCCCcEEeccccCCCCcHHHHHHHHHHHHHHhCCCHHHHHHHhhHhhCceeEEEEcCchhHHHHHHHHHh
Confidence 9876530 00 00 0000
Q ss_pred ----ChhhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhh
Q psy232 242 ----PLGMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 242 ----~~~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
+...++.+||+|+.+++||+|||||||||++|||+||.|++.++++++++.++|+++
T Consensus 395 ~~~~~~~~~~~~DGlr~~~~~gw~lvRpSgTEP~~rvy~Ea~~~~~~~~l~~~~~~~i~~~ 455 (463)
T 1p5d_X 395 DAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAV 455 (463)
T ss_dssp HCCCCSSEEECSSSEEEEETTEEEEEEECSSSSEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCcccccceEEEEecCcEEEEEecCCCceEEEEEEECCHHHHHHHHHHHHHHHHhh
Confidence 011234689999999999999999999999999999999999999999999999875
No 8
>1tuo_A Putative phosphomannomutase; thermus thermophilus HB8, biosynthesis of alginate, structural genomics; 1.70A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-54 Score=417.12 Aligned_cols=262 Identities=20% Similarity=0.210 Sum_probs=199.4
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCcc---------------------cccHHHHHHHHHHHHHHhhhhhhccCCCCC
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSR---------------------VFEESEYFTHFGNAYLSYQKFLLTDNKSYS 67 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~---------------------~~~~~~Y~~~l~~~~~~~~~~i~~~~~~~~ 67 (299)
=||||||||++|||||||+++|.+++++. .+..+.|++++.+.++ .+.|+ .++
T Consensus 104 ImITASHNP~~~NGiK~~~~~G~~i~~~~~~~Ie~~~~~~~~~~~g~~~~~d~~~~Y~~~l~~~~~--~~~i~----~~~ 177 (464)
T 1tuo_A 104 AMLTASHNPPQYLGVKFKDATGGPIAQEEAKAIEALVPEEARALEGAYETLDLREAYFEALKAHLD--LKALS----GFS 177 (464)
T ss_dssp EEECCTTSCTTEEEEEEEETTTEECCHHHHHHHHHTCCSCCCCCCCCCEEECCHHHHHHHHHTTSC--HHHHT----TCC
T ss_pred EEEcCCCCCchHCCEEEEcCCCCcCChHHHHHHHHHhcCCccccCCceEEcCcHHHHHHHHhhhcC--hhhcc----ccC
Confidence 49999999999999999999998775421 1566899999988876 23343 468
Q ss_pred CeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCc----ccc-ccCCCcEEEEeCC
Q psy232 68 QDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPT----GVN-IKNLNNKYLSVDG 142 (299)
Q Consensus 68 ~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~----~l~-~~~~adlGia~Dg 142 (299)
+|||+||+||+++.+++++|++|||.++++.+|+.||| .|+|+ +|++..+... .+. . .+||+|++|||
T Consensus 178 lkivvd~~nG~~~~~~~~~l~~lG~~~~v~~~~~~pDg-~Fp~~-----~p~p~~~~~~~l~~~v~~~-~~adlgia~Dg 250 (464)
T 1tuo_A 178 GVLYHDSMGGAGAGFLKGFLRHVGLEIPVRPIREEPHP-LFHGV-----NPEPIPKNLGVTLAVLGPE-TPPSFAVATDG 250 (464)
T ss_dssp SCEEEECTTSTTTTHHHHHHHHTTCCCCEEEESCSCCT-TGGGS-----CSCCSGGGCHHHHHHHTTC-CTTCEEEEECT
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCCceEEEEecccCC-CCCCC-----CcCCCchhHHHHHHHHHhc-cCCCEEEEECC
Confidence 99999999999999999999999984468999999998 54443 2221111111 111 2 78999999999
Q ss_pred CCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEEEecCchHH
Q psy232 143 DADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTSTGVKH 222 (299)
Q Consensus 143 DgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~~G~k~ 222 (299)
||||+++ +|++| ++++||++++|++.++++.. + +..||.|++||..+.+.+++ +|+++++|+||+||
T Consensus 251 DaDR~~v--vd~~G--~~l~gd~i~~Lla~~l~~~~--~------~~~vv~tv~ss~~l~~~a~~-~g~~~~~t~tG~k~ 317 (464)
T 1tuo_A 251 DADRVGV--VLPGG--VFFNPHQVLTTLALYRFRKG--H------RGRAVKNFAVTWLLDRLGER-LGFGVTTTPVGFKW 317 (464)
T ss_dssp TSSBEEE--EETTT--EEECHHHHHHHHHHHHHHTT--C------CSEEEEETTSCTHHHHHHHH-HTCCEEEECSSHHH
T ss_pred CCCeEEE--EeCCC--EEECHHHHHHHHHHHHHhhC--C------CCeEEEeecchHHHHHHHHH-cCCeEEEecCcHHH
Confidence 9999999 99999 56999999999999998742 2 35788887766666555555 79999999999999
Q ss_pred HHHHHHhCCcc-------------------------------------------c-----c-c----c-c-------ccC
Q psy232 223 LHHEALKYDTI-------------------------------------------N-----A-D----T-E-------IVE 241 (299)
Q Consensus 223 i~~~~~~~~~i-------------------------------------------~-----~-~----~-~-------~~~ 241 (299)
+.++|.+.+++ + . . + . +++
T Consensus 318 i~~~m~~~~~~~ggE~Sgg~~~~~~~~~~Dgi~a~l~~le~~a~~g~~L~ell~~l~~~~~~~~~~~~~~v~~~~~~~~~ 397 (464)
T 1tuo_A 318 IKEEFLKGDCFIGGEESGGVGYPEHLPERDGILTSLLLLESVAATGKDLAEQFKEVEALTGLTHAYDRLDLPLKAPLDLT 397 (464)
T ss_dssp HHHHHTTTCEEEEECTTSBEEETTTEEEECHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTCCCEEEEEC----------
T ss_pred HHHHHHhcCcEEEEccceeEEECCcCcCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHcCccccceEEeEEeCCHHHHH
Confidence 99999886641 0 0 0 0 0 111
Q ss_pred C--h---------hhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHH
Q psy232 242 P--L---------GMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVK 296 (299)
Q Consensus 242 ~--~---------~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~ 296 (299)
. . ..++.+||+|+.+++||++||||||||++|||+|+.+++.++++++++.++|+
T Consensus 398 ~l~~~~~~~~~~~~~v~~~DGl~~~~~~~w~lvRpSgTEP~lrvy~Ea~~~~~~~~l~~~~~~~i~ 463 (464)
T 1tuo_A 398 PFREPRPLAGLTPKGVDTLDGVKWLYEEAWVLFRASGTEPVVRIYVEAQSPELVRALLEEARKLVE 463 (464)
T ss_dssp -----CCCTTCCEEEEECSSSEEEEETTEEEEEECC-----CEEEEEESSHHHHHHHHHHHHTTTC
T ss_pred hhhhhHhhCCCceeEEEcCCeEEEEECCEEEEEEcCCCccEEEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 0 0 11467899999998899999999999999999999999999999999887653
No 9
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=100.00 E-value=4.7e-53 Score=414.52 Aligned_cols=269 Identities=15% Similarity=0.100 Sum_probs=200.3
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCccc-----------------------------------ccHHHHHHHHHHHHH
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSRV-----------------------------------FEESEYFTHFGNAYL 53 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~~-----------------------------------~~~~~Y~~~l~~~~~ 53 (299)
=||||||||++||||||++++|+++++..+ +..+.|++++.+.++
T Consensus 165 ImITASHNP~~~NGiK~~~~~G~~~~~~i~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~Yi~~l~~~i~ 244 (570)
T 3na5_A 165 IVITPSHNPPEDGGIKYNPPNGGPADTNVTKVVEDRANALLAGGLQGVKRISLDAAMASGHVKAVDLVQPFVEGLADIVD 244 (570)
T ss_dssp EEECCTTCCTTCEEEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCCCCCHHHHHHTTCEEEECCHHHHHHHGGGTSC
T ss_pred EEEEeCCCChHHCcEEEecCCCCcCCHHHHHHHHHHHHHhhhcccccccccchhhhccCCeeeccchHHHHHHHHHhhcC
Confidence 499999999999999999999998865432 234556666665554
Q ss_pred HhhhhhhccCCCCCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCC---CCcccccCCccccc
Q psy232 54 SYQKFLLTDNKSYSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGAD---FAKTKKIVPTGVNI 130 (299)
Q Consensus 54 ~~~~~i~~~~~~~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~---~p~~~~~~~~~l~~ 130 (299)
.+.|+ .+++|||+||+||+++.+++++|++||| +++.+|+.+|| .++++.+..+ .+.+. .+.++..
T Consensus 245 --~~~i~----~~~lkIvvD~~~Gag~~~~~~il~~lG~--~v~~v~~~~D~-~F~~~~p~~~G~i~~~~~--~~~al~~ 313 (570)
T 3na5_A 245 --MAAIQ----KAGLTLGVDPLGGSGIEYWKRIAEHYKL--NLTLVNDQVDQ-TFRFMHLDKDGAIRMDCS--SECAMAG 313 (570)
T ss_dssp --HHHHH----HHTCCEEEECTTCTTHHHHHHHHHHTTC--CEEESCCCCCT-TCTTSBCCTTSSCCCCTT--CTTTTHH
T ss_pred --hhhhc----cCCCEEEEECCCCcHHHHHHHHHHHcCC--eEEEECCEECC-CCCCCCCCcccccCCCCC--ChHHHHH
Confidence 22332 3579999999999999999999999999 99999999997 5555433110 00110 1222221
Q ss_pred c----CCCcEEEEeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHH
Q psy232 131 K----NLNNKYLSVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIK 206 (299)
Q Consensus 131 ~----~~adlGia~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~ 206 (299)
+ .+||+|++|||||||+++ +|+ | ++++||++++|++.++++.. ++.+ .+..|+.| ++|+.+.+.++
T Consensus 314 l~~~~~~aDlgia~DgDaDR~~i--vd~-g--~~l~gd~~lal~a~~ll~~~--~~~~--~~~~v~~t-~vSs~~l~~ia 383 (570)
T 3na5_A 314 LLALRDKFDLAFANDPDYDRHGI--VTP-A--GLMNPNHYLAVAINYLFQHR--PLWG--KDVAVGKT-LVSSAMIDRVV 383 (570)
T ss_dssp HHTTGGGCSEEEEECTTSCBEEE--EET-T--EECCHHHHHHHHHHHHTTSC--TTSC--TTCEEEEE-TTSCTHHHHHH
T ss_pred HHHhccCCCEEEEECCCCCeEEE--EEC-C--EEECHhHHHHHHHHHHHHhC--CCCC--CCceEEEe-eCchHHHHHHH
Confidence 1 689999999999999988 999 8 56999999999999998764 2200 01235545 55555566676
Q ss_pred HhCCCeEEEecCchHHHHHHHHhCCcc-----------------------------------------------------
Q psy232 207 NTLNIDVIFTSTGVKHLHHEALKYDTI----------------------------------------------------- 233 (299)
Q Consensus 207 ~~~g~~v~~t~~G~k~i~~~~~~~~~i----------------------------------------------------- 233 (299)
+.+|+++++|+||||||.++|.+.+++
T Consensus 384 ~~~G~~~~~t~tG~k~i~~~m~~~~~~~ggEeSgg~~f~~~~g~~~~~dkDGi~aal~~le~~a~~g~~lsell~~l~~~ 463 (570)
T 3na5_A 384 NDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEESAGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAAR 463 (570)
T ss_dssp HHHTCCEEEECSSTHHHHHHHHTTSEEEEEETTTEEEECCTTSCCSCSSCCHHHHHHHHHHHHHHHSSCHHHHHHHHHHH
T ss_pred HHCCCceEEecccHHHHHHHHHhcCCeEEEeccCCcccccccccceeecCcHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 668999999999999999999975430
Q ss_pred ---------------cccc---cccC----Ch---------------hhhhHHHHhhhhcCCceEEEecCCCcceEEEEE
Q psy232 234 ---------------NADT---EIVE----PL---------------GMQDSINKSVAKFNNARSFVRPSGTEDIVRIYV 276 (299)
Q Consensus 234 ---------------~~~~---~~~~----~~---------------~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~ 276 (299)
+.+. .+.+ +. ...+.+||+|+.+++||++||||||||++|||+
T Consensus 464 yg~~~~~r~~~~~~~~~k~~m~~l~~~~~~~~~~~g~~i~~~~~~~~~~~~~iDGlkv~~~dgW~lvRpSgTEP~lriy~ 543 (570)
T 3na5_A 464 FGAPSYNRLQASATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARPSGTEDAYKIYC 543 (570)
T ss_dssp HCCCEEEEEEEECCHHHHHHHHTCCGGGCCCSEETTEECCEEEEECTTTCCEEEEEEEECSSEEEEEEECSSSSEEEEEE
T ss_pred hCCceeEEecCCCCHHHHHHHHHhhhccCcchhhcCcceEEEeecccCCcCCCCeEEEEecCcEEEEEECCCCCeEEEEE
Confidence 0000 0000 00 012458999999999999999999999999999
Q ss_pred Ee-CCHHHHHHHHHHHHHHHHhh
Q psy232 277 EA-ETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 277 Ea-~~~~~~~~l~~~~~~~v~~~ 298 (299)
|+ .+++.++++.++++++|+++
T Consensus 544 Ea~~~~e~l~~l~~~~~~~v~~~ 566 (570)
T 3na5_A 544 ESFLGEEHRKQIEKEAVEIVSEV 566 (570)
T ss_dssp EESSCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHHHHHHHH
Confidence 99 89999999999999998875
No 10
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=100.00 E-value=9.1e-51 Score=396.15 Aligned_cols=268 Identities=16% Similarity=0.076 Sum_probs=183.0
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCcccccH---------------------------------HHHHHHHHHHHHHh
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNSRVFEE---------------------------------SEYFTHFGNAYLSY 55 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~~~~~~---------------------------------~~Y~~~l~~~~~~~ 55 (299)
=||||||||++|||||||+++|.+++++.++.+ +.|++++.+.++
T Consensus 125 ImITASHNP~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~Y~~~l~~~~~-- 202 (524)
T 2z0f_A 125 VLLTPSHNPPEDGGFKYNPPTGGPANARITRAIEERANALLQEGLKGVKRLPLREALARAKPFDYAGLYVEKVAEAVD-- 202 (524)
T ss_dssp EEECC--CCTTCEEEEEECTTSSCCCHHHHHHHHHHHHHHHHTTTTTCCCCCHHHHHHHCEEECHHHHHHHHGGGTSC--
T ss_pred EEEcCCCCCchhCCEEEECCCCCcCCHHHHHHHHHHHHhhcccccccccccChhhhcccccccchHHHHHHHHHHhcC--
Confidence 599999999999999999999998876443222 344444444333
Q ss_pred hhhhhccCCCCCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCC---CCCccccc--CCccc-c
Q psy232 56 QKFLLTDNKSYSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGA---DFAKTKKI--VPTGV-N 129 (299)
Q Consensus 56 ~~~i~~~~~~~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~---~~p~~~~~--~~~~l-~ 129 (299)
.+.++ .+++|||+||+||+++.+++++|++||| +++.+|+.+|+ .++++++.. .+|.+..+ +...+ .
T Consensus 203 ~~~i~----~~~lkivvd~~nG~~~~~~~~ll~~lG~--~v~~v~~~~d~-~f~~~~~~~~g~~~p~p~~~~~l~~~~~~ 275 (524)
T 2z0f_A 203 LEAIR----ASGLRIGVDPLGGASLRVWERLAESHGL--PLEVVNPTLDP-TFRFMPKDHDGKIRMDCSSPYAMAGLLAL 275 (524)
T ss_dssp HHHHH----HSCCCEEEECTTSTTHHHHHHHHHHHTC--CEEEC--------------------------------CCCC
T ss_pred hhhhc----cCCCeEEEeCCCCchHHHHHHHHHHcCC--cEEEEcCccCC-CCCCCCCCCccccCCCCCChhHHHHHHHh
Confidence 11222 3689999999999999999999999999 99999999987 555443211 01111111 00001 1
Q ss_pred ccCCCcEEEEeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhC
Q psy232 130 IKNLNNKYLSVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTL 209 (299)
Q Consensus 130 ~~~~adlGia~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~ 209 (299)
. .+||+|+||||||||+++ +|++ ++++||++++|+++++++.. ... +..++.+.+||.. .+.+++.+
T Consensus 276 ~-~~aDlgia~DgDaDR~~v--vd~~---~~l~gd~i~alla~~l~~~~-~~~-----~~~vv~t~vss~~-l~~ia~~~ 342 (524)
T 2z0f_A 276 K-DRFDLAIGNDPDADRHGI--VTPR---GLMNPNHYLAAALHHLYTTR-SWP-----GAKVGKTAVTSAL-LDRVAQAL 342 (524)
T ss_dssp C-CCSSEEEEECTTSCSEEE--EETT---EECCHHHHHHHHHHHHHTTC-CCT-----TCEEEEETTSCTH-HHHHHHHT
T ss_pred h-cCCCEEEEeCCccccceE--EecC---ceechhHHHHHHHHHHHHhc-CCC-----CCeEEEecccHHH-HHHHHHHh
Confidence 2 789999999999999998 9987 35999999999999987652 001 1356767665554 56666668
Q ss_pred CCeEEEecCchHHHHHHHHhCCcc------------------------------------------------c--c----
Q psy232 210 NIDVIFTSTGVKHLHHEALKYDTI------------------------------------------------N--A---- 235 (299)
Q Consensus 210 g~~v~~t~~G~k~i~~~~~~~~~i------------------------------------------------~--~---- 235 (299)
|+++++|+||||||.++|.+.+++ + +
T Consensus 343 G~~~~~t~tG~k~i~~~m~~~~~~~ggEeSgg~~~~~~~~~~~~~~~Dgi~aal~~le~~a~~g~~L~ell~~l~~~~g~ 422 (524)
T 2z0f_A 343 GREVYETPVGFKHFVAGLLEGWLGFAGEESAGASFLRFDGRPFSTDKDGILMGLLAAELMAKRGQAPDALYEALAEKLGR 422 (524)
T ss_dssp TCCEEEECSSTHHHHHHHHHSSEEEEEETTTEEEECCTTSCCSCSSCCHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHCC
T ss_pred CceEEEcCCcHHHHHHHHhhCCcEEEEEccCcEEECCCCcccccccchHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhCc
Confidence 999999999999999999875420 0 0
Q ss_pred -------------cccccC---C-----h---------------hhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEe-
Q psy232 236 -------------DTEIVE---P-----L---------------GMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEA- 278 (299)
Q Consensus 236 -------------~~~~~~---~-----~---------------~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea- 278 (299)
.+.+++ . . ..++.+||+|+.+++||++||||||||++|||+|+
T Consensus 423 ~~~~~~~~~~~~~~k~~~~~l~~~~~~~~~~~~~~i~~~~~~~~g~~~~~dGlr~~~~~gwvlvRpSgTEP~irvy~Ea~ 502 (524)
T 2z0f_A 423 PYYARKDLPVSPEAKARLARLSAKEVHPSTLAGEPVLQVLDRATGNGEPLGGIKVVAANAWFAVRPSGTEDVAKVYAESF 502 (524)
T ss_dssp CEEEEEEEECCHHHHHHHTTCCTTTSCCSEETTEECCEEEEECTTTCCEEEEEEEECSSEEEEEEECSSSSEEEEEEEES
T ss_pred ceeeeecccchHHHHHHHHHHhhcCCChHHhCCceeEEEEeccCCCCCCCCeEEEEECCeEEEEEcCCCCCEEEEEEEEe
Confidence 000110 0 0 00123899999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhh
Q psy232 279 ETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 279 ~~~~~~~~l~~~~~~~v~~~ 298 (299)
.+++.++++.+.+.+++++.
T Consensus 503 ~~~~~~~~~~~~~~~~~~~~ 522 (524)
T 2z0f_A 503 LGEAHLERVLEEATALLHKA 522 (524)
T ss_dssp SCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHH
Confidence 68899999999999988764
No 11
>4hjh_A Phosphomannomutase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: SEP G6Q; 2.10A {Brucella melitensis BV}
Probab=100.00 E-value=3.7e-50 Score=387.88 Aligned_cols=248 Identities=13% Similarity=0.159 Sum_probs=186.2
Q ss_pred ceecCCCCCCCCCceEEECCCCCCCCCc------------------------ccccHHH-HHHHHHHHHHHhhhhhhccC
Q psy232 9 EEILNLYNKSYSQDIYFDGANGNHNVNS------------------------RVFEESE-YFTHFGNAYLSYQKFLLTDN 63 (299)
Q Consensus 9 ~~iTaSHNP~~~nGiK~~~~~G~~~~~~------------------------~~~~~~~-Y~~~l~~~~~~~~~~i~~~~ 63 (299)
=||||||||++|||||||+++|.+..+. ..+..+. |++++.+.++ ...
T Consensus 103 ImITASHNP~~~NGiK~~~~~G~~~~~~e~~I~~~~~~~~~~~~~~~~~g~~~~d~~~~~Yi~~~~~~~~--~~~----- 175 (481)
T 4hjh_A 103 IMVTGSHIPDDRNGLKFYRRDGEIDKDDEAAISAAYRKLPAILAARKHVGSTETDAALQAYADRYAGFLG--KGS----- 175 (481)
T ss_dssp EEECCTTSCTTEEEEEEEETTEECCHHHHHHHHHHHHTCCC-CCCCCCCCSCCCCHHHHHHHHHHHHHHC--TTT-----
T ss_pred EEEecCCCCCCCCCEEEeCCCCCCCCHHHHHHHHHHhhhccccccccccCcccccccHHHHHHHHHHhcC--ccc-----
Confidence 4999999999999999999998543210 1234567 9999988776 223
Q ss_pred CCCCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEccccCCCCCCCCCCCCCCCcccccCCcccccc------CCCcEE
Q psy232 64 KSYSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQDVTTQGKLNFQCGADFAKTKKIVPTGVNIK------NLNNKY 137 (299)
Q Consensus 64 ~~~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~~~d~~~~~n~~~g~~~p~~~~~~~~~l~~~------~~adlG 137 (299)
.+++||++||+||+++.+++++|++||| +++.+|+.++ ++|++ |.+ +.|+++..+ .+||+|
T Consensus 176 -~~~lkivvd~~~Ga~~~~~~~~l~~lG~--~v~~l~~~~~---f~~~~-----~~p--~~~e~l~~l~~~v~~~~aDlg 242 (481)
T 4hjh_A 176 -LNGLRVGVYQHSSVARDLLMYLLTTLGV--EPVALGRSDI---FVPVD-----TEA--LRPEDIALLAQWGKSDRLDAI 242 (481)
T ss_dssp -TTTCEEEEEEETCTTHHHHHHHHHHTTC--EEEEEEECSS---CCCCC-----TTS--CCHHHHHHHHHHHTSTTCSEE
T ss_pred -ccCCEEEEECCCChHHHHHHHHHHHcCC--eEEEecCCCC---CCCCC-----CCC--CCHHHHHHHHHHHHhcCCCEE
Confidence 2579999999999999999999999999 9999986432 23322 211 123333222 789999
Q ss_pred EEeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcCCCcccCCceEEeeeeChhHHHHHHHhCCCeEEEec
Q psy232 138 LSVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCNLKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTS 217 (299)
Q Consensus 138 ia~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~ 217 (299)
++|||||||+++ +|++|+| ++||++++|+++++. ...|+.+ ++++...+.+ ++ ++++|+
T Consensus 243 ia~DgDaDR~~v--vd~~G~~--i~gd~l~~L~a~~l~------------~~~vv~~-v~ss~~l~~~---~~-~~~~t~ 301 (481)
T 4hjh_A 243 VSTDGDADRPLI--ADEHGQF--VRGDLAGAITATWVG------------ADTLVTP-VTSNTALESR---FP-KVLRTR 301 (481)
T ss_dssp EEECTTSSSEEE--ECTTSCE--ECHHHHHHHHHHHTT------------CSEEEEE-TTSCTTHHHH---CS-CEEEEC
T ss_pred EEECCCCCceEE--EcCCCCE--EChHHHHHHHHHHhh------------cCcEEEE-EcChHHHHHh---cC-ceEEec
Confidence 999999999988 9999966 999999999999751 1245544 5554333333 55 999999
Q ss_pred CchHHHHHHHHhC-----Cc-------------------------------c------------------------cc--
Q psy232 218 TGVKHLHHEALKY-----DT-------------------------------I------------------------NA-- 235 (299)
Q Consensus 218 ~G~k~i~~~~~~~-----~~-------------------------------i------------------------~~-- 235 (299)
||+||+.++|.+. ++ | .+
T Consensus 302 vG~~~i~~~m~~~~~~g~~~~~GgEeSgg~~~~~~~~~d~~~~~~~~~~Dgi~a~l~~le~~a~~g~~Lsell~~l~~~~ 381 (481)
T 4hjh_A 302 VGSPYVIASMAQVSTGNSGPVIGFEANGGVLLGSTVERNGRSLTALPTRDALLPILACLATVHEKKTPLSTIARSYGFRV 381 (481)
T ss_dssp SSHHHHHHHHHHCC----CCEEEECTTCCEEECSCEEETTEEECCEEEEESHHHHHHHHHHHHHHTCCHHHHHHTTCCCE
T ss_pred cchHHHHHHHHHhhccCCCeEEEEeCCCCEEECchhcccccccccCCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 9999999999983 11 0 00
Q ss_pred ---cc----------ccc----CC------------hhhhhHHHHhhhhcCCc-eEEEecCCCcceEEEEEEeCCHHHHH
Q psy232 236 ---DT----------EIV----EP------------LGMQDSINKSVAKFNNA-RSFVRPSGTEDIVRIYVEAETSEDVN 285 (299)
Q Consensus 236 ---~~----------~~~----~~------------~~~~~~iDGik~~~~~g-w~liRpSgTEp~iriy~Ea~~~~~~~ 285 (299)
++ .++ +. ...++.+||+|+.+++| |++||||||||++|||+||+|++.++
T Consensus 382 ~~~~~~~~~~~~~~~~~m~~l~~~~~~~~~~~~~g~~~~v~~~DGlri~~~dg~wvlvRpSgTEP~lrvy~Ea~s~e~~~ 461 (481)
T 4hjh_A 382 ALSDRLQNIPQEASTAFLALLEDADKRASLFPAGDAIVRVETIDGVKLFFQSGNAVHYRASGNAPELRCYVESSDDTQAA 461 (481)
T ss_dssp EEEEEEESCCHHHHHHHHHHTTSHHHHHHHSCTTSCEEEEECSSSEEEEETTSCEEEEEECSSSSEEEEEEEESSHHHHH
T ss_pred CCceeecCCCHHHHHHHHHHHHhcCChHHHHhhcCccccccCCCeEEEEecCCcEEEEecCCCCceEEEEEEeCCHHHHH
Confidence 00 011 00 01235679999999876 89999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy232 286 ALTEEIQQVVKT 297 (299)
Q Consensus 286 ~l~~~~~~~v~~ 297 (299)
++++++.++|++
T Consensus 462 ~l~~~~~~~i~~ 473 (481)
T 4hjh_A 462 KLQALGLEIARK 473 (481)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
No 12
>3pmg_A Alpha-D-glucose-1,6-bisphosphate; phosphoglucomutase, phosphotransferase; HET: SEP; 2.40A {Oryctolagus cuniculus} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1c4g_A* 1jdy_A* 1lxt_A 1vkl_A* 1c47_A*
Probab=100.00 E-value=2.8e-48 Score=380.33 Aligned_cols=200 Identities=17% Similarity=0.116 Sum_probs=149.9
Q ss_pred eecCCCCC---CCCCceEEECCCCCCCCCcc---------------------------------------------cccH
Q psy232 10 EILNLYNK---SYSQDIYFDGANGNHNVNSR---------------------------------------------VFEE 41 (299)
Q Consensus 10 ~iTaSHNP---~~~nGiK~~~~~G~~~~~~~---------------------------------------------~~~~ 41 (299)
|||||||| ++||||||++++|+++++.. .+..
T Consensus 112 mITASHNP~~~~~~nGiK~~~~~G~~~~~~~~~~Ie~~~~~i~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~d~~ 191 (561)
T 3pmg_A 112 ILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFDLENKFKPFTVEIVDSV 191 (561)
T ss_dssp EECCTTSCCSTTSEEEEEEEETTSSBCCHHHHHHHHHHHHHCCEEEECTTCCCCTTSCEEEEECCTTCSSCEEEEEECSS
T ss_pred EEEeCCCCCCCCCcceEEEEeCCCCcCCHHHHHHHHHHHHhhhhhccccccccchhhhccccccccccccCCceEecChH
Confidence 99999999 56999999999998874311 1245
Q ss_pred HHHHHHHHHHHHHhhhhhhcc-CCCCCCeEEEcCCCCCcHHHHHHHH-HHcCCCceEE-EEccccCCCCCCCCCCCCCCC
Q psy232 42 SEYFTHFGNAYLSYQKFLLTD-NKSYSQDIYFDGANGVGGVKIKELQ-KIIESKLKIE-VYNQDVTTQGKLNFQCGADFA 118 (299)
Q Consensus 42 ~~Y~~~l~~~~~~~~~~i~~~-~~~~~~kIvvD~~nG~~~~~~~~ll-~~lg~~~~v~-~ln~~~d~~~~~n~~~g~~~p 118 (299)
+.|++.+.+.|+ .+.|+.. ...+++|||+||+||+++.+++++| ++||| +++ .+|+.||+ .||+.+|
T Consensus 192 ~~Yi~~l~~~~d--~~~i~~~~~~~~~lkIvvD~~~Ga~~~~~~~il~~~lG~--~v~~~v~~~pd~------~F~~~~P 261 (561)
T 3pmg_A 192 EAYATMLRNIFD--FNALKELLSGPNRLKIRIDAMHGVVGPYVKKILCEELGA--PANSAVNCVPLE------DFGGHHP 261 (561)
T ss_dssp HHHHHHHHTTSC--HHHHHHHHHSTTCCCEEEECTTSTTHHHHHHHHTTTTCC--CGGGEESCSCCT------TGGGSCC
T ss_pred HHHHHHHHHhcC--hHHhhhhhccCCCcEEEEECCCCchHHHHHHHHHHHcCC--CeEEEECCEECC------CCCCCCC
Confidence 789999988776 3333210 0125799999999999999999976 99999 775 68998886 4555555
Q ss_pred cccccCCcccccc---CCCcEEEEeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHH-----HHHhhcCCCcccCCc
Q psy232 119 KTKKIVPTGVNIK---NLNNKYLSVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYIN-----ELIARCNLKDKVNIK 190 (299)
Q Consensus 119 ~~~~~~~~~l~~~---~~adlGia~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll-----~~~~~~~~~~~~~~~ 190 (299)
++..+....+... .++|+|+|+||||||+++ +|++|++ ++++++++|++.+++ +.. + ..+
T Consensus 262 ~P~~~~~~~L~~~v~~~~aDlgia~DgDaDR~~i--vd~~G~~--v~~~~~lalla~~l~~~~~~~~~---~-----~~~ 329 (561)
T 3pmg_A 262 DPNLTYAADLVETMKSGEHDFGAAFDGDGDRNMI--LGKHGFF--VNPSDSVAVIAANIFSIPYFQQT---G-----VRG 329 (561)
T ss_dssp CCSTTTTHHHHHHHHTSCCSEEEEECTTSSCEEE--EEGGGCB--CCHHHHHHHHHHTGGGSHHHHHH---C-----CCC
T ss_pred CCChHHHHHHHHHHHhcCCCEEEEEcCCCCeEEE--EeCCCcE--ECccHHHHHHHHHHHhhhhhHhc---C-----CCe
Confidence 4332222222111 789999999999999998 9999955 999999999999974 222 2 135
Q ss_pred eEEeeeeChhHHHHHHHhCCCeEEEecCchHHHHHHHHhCCc
Q psy232 191 VIQTAYTNGNCTNYIKNTLNIDVIFTSTGVKHLHHEALKYDT 232 (299)
Q Consensus 191 vv~t~~ss~~~~~~i~~~~g~~v~~t~~G~k~i~~~~~~~~~ 232 (299)
||.+.+||.. .+.+++.+|+++++|+|||||+.++|.+.++
T Consensus 330 vv~tv~Ss~~-ld~va~~~G~~v~~t~vG~k~i~~~m~~~~~ 370 (561)
T 3pmg_A 330 FARSMPTSGA-LDRVANATKIALYETPTGWKFFGNLMDASKL 370 (561)
T ss_dssp EEEETTSCTH-HHHHHHTSSSCEEEECSSHHHHHHHHHTTCC
T ss_pred EEEEechHHH-HHHHHHHcCCCEEEEeccHHHHHHHhccCCe
Confidence 7766555554 5666666999999999999999999998653
No 13
>1kfi_A Phosphoglucomutase 1; parafusin, phosphoprotein PP63, exocytosis, isomerase; 2.40A {Paramecium tetraurelia} SCOP: c.84.1.1 c.84.1.1 c.84.1.1 d.129.2.1 PDB: 1kfq_A
Probab=100.00 E-value=3.5e-47 Score=374.07 Aligned_cols=201 Identities=15% Similarity=0.084 Sum_probs=149.4
Q ss_pred ceecCCCCCC--C--CCceEEECCCCCCCCCcc-----------------------------------------------
Q psy232 9 EEILNLYNKS--Y--SQDIYFDGANGNHNVNSR----------------------------------------------- 37 (299)
Q Consensus 9 ~~iTaSHNP~--~--~nGiK~~~~~G~~~~~~~----------------------------------------------- 37 (299)
=||||||||+ + |||||||+++|.++++..
T Consensus 121 ImITASHNP~~~~~~~NGiK~~~~~G~~~~~~~~~~Ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 200 (572)
T 1kfi_A 121 IILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTVDYEFEKHINLDQIGVYKFEGTRLEKSHFEV 200 (572)
T ss_dssp EEECCTTSCCSTTTCEEEEEEECTTSSBCCHHHHHHHHHHHTTCCEEEECCCCGGGTCCTTSCEEEEEEBCCTTCCEEEE
T ss_pred EEEeCCCCCCCcCcccCcEEEecCCCCcCCHHHHHHHHHHHHhhhcccccccccccccChhhccccccccccccccccce
Confidence 4999999995 4 999999999999864211
Q ss_pred --cccHHHHHHHHHHHHHHhhhhhhccCCCCCCeEEEcCCCCCcHHHHHHHHH-HcCCCce-EEEEccccCCCCCCCCCC
Q psy232 38 --VFEESEYFTHFGNAYLSYQKFLLTDNKSYSQDIYFDGANGVGGVKIKELQK-IIESKLK-IEVYNQDVTTQGKLNFQC 113 (299)
Q Consensus 38 --~~~~~~Y~~~l~~~~~~~~~~i~~~~~~~~~kIvvD~~nG~~~~~~~~ll~-~lg~~~~-v~~ln~~~d~~~~~n~~~ 113 (299)
.+..+.|++++.+.++. +.|+.....+++|||+||+||+++.+++++|+ +||| + ++.+|+.||+ .+++
T Consensus 201 ~~~d~~~~Yi~~l~~~~~~--~~i~~~l~~~~lkIvvd~~nG~~~~~~~~il~~~lG~--~~v~~l~~~pD~-~Fp~--- 272 (572)
T 1kfi_A 201 KVVDTVQDYTQLMQKLFDF--DLLKGLFSNKDFSFRFDGMHGVAGPYAKHIFGTLLGC--SKESLLNCDPSE-DFGG--- 272 (572)
T ss_dssp EEECSSHHHHHHHHHHSCH--HHHHHHHTCTTCCEEEECTTSTHHHHHHHHHTTTTCC--CGGGEESCSCCT-TGGG---
T ss_pred eecCcHHHHHHHHHHhcCH--HHHhhhcccCCCEEEEeCCCcchHHHHHHHHHHhCCC--CeEEEEecccCC-CCCC---
Confidence 03456899999888752 22210000268999999999999999999998 9999 6 8889999997 4333
Q ss_pred CCCCCcccccCCc----cc-------cccCCCcEEEEeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHHhhcC
Q psy232 114 GADFAKTKKIVPT----GV-------NIKNLNNKYLSVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELIARCN 182 (299)
Q Consensus 114 g~~~p~~~~~~~~----~l-------~~~~~adlGia~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~~~~~ 182 (299)
.+|.+..+... .+ .. .+||+|+||||||||+++ +| +| +.++++++++|++.+++...++ +
T Consensus 273 --~~p~P~~~~~~~L~~~v~~~~~~a~~-~~aDlgiA~DgDaDR~~v--vd-~G--~~v~~~~~l~ll~~~~l~~~~~-g 343 (572)
T 1kfi_A 273 --GHPDPNLTYAHDLVELLDIHKKKDVG-TVPQFGAACDGDADRNMI--LG-RQ--FFVTPSDSLAVIAANANLIFKN-G 343 (572)
T ss_dssp --SCCCCSTTTTHHHHHHTTTTCCSCGG-GSCSEEEEECTTSCBEEE--EE-TT--EEECHHHHHHHHHHTHHHHSTT-C
T ss_pred --CCCCCCchhHHHHHHHHhhhhccccc-cCCCeEEeeCCCCceeEE--ee-CC--eEecccHhHHHHHHHHHHHhcC-C
Confidence 34432211111 22 23 789999999999999999 89 89 5599999999999998875211 2
Q ss_pred CCcccCCceEEeeeeChhHHHHHHHhCCCeEEEecCchHHHHHHHHhCCc
Q psy232 183 LKDKVNIKVIQTAYTNGNCTNYIKNTLNIDVIFTSTGVKHLHHEALKYDT 232 (299)
Q Consensus 183 ~~~~~~~~vv~t~~ss~~~~~~i~~~~g~~v~~t~~G~k~i~~~~~~~~~ 232 (299)
...||.+.+||..+.+.+++ +|+++++|+|||||+.+.|.+.++
T Consensus 344 -----~~~Vv~~~~ss~~l~~ia~~-~G~~~~~t~tG~k~i~~~m~~~~~ 387 (572)
T 1kfi_A 344 -----LLGAARSMPTSGALDKVAAK-NGIKLFETPTGWKFFGNLMDAGLI 387 (572)
T ss_dssp -----CCCEEEETTSCTHHHHHHHH-HTCCEEEECSSTHHHHHHHHTTSC
T ss_pred -----CcEEEEEeCchHHHHHHHHH-cCCeEEEeCCcHHHHHHHHhcCCc
Confidence 11477665566666555544 899999999999999999987653
No 14
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=99.66 E-value=1.9e-16 Score=122.78 Aligned_cols=59 Identities=47% Similarity=0.746 Sum_probs=54.4
Q ss_pred CChhhhhHHHHhhhhcCCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhhC
Q psy232 241 EPLGMQDSINKSVAKFNNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTYL 299 (299)
Q Consensus 241 ~~~~~~~~iDGik~~~~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~~ 299 (299)
++...++.+||+++.+++||+|||||||||+||||+||.+++.++++++.+.+.|++++
T Consensus 39 ~~~~~~~~idgl~~~~~~gwvlvRpSGTEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~ 97 (112)
T 1wjw_A 39 TPPGLQEAINDLVKKYTLARAFVRPSGTEDIVRVYAEANSQESADRLAYEVSLLVFQLA 97 (112)
T ss_dssp SSTTHHHHHHHHHHHSSSEEEEEECSSSSSSEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhhhhhhcEEEEcCCcEEEEEeCCCccEEEEEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 34567999999999998899999999999999999999999999999999999998763
No 15
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=72.38 E-value=3.2 Score=27.21 Aligned_cols=29 Identities=10% Similarity=0.166 Sum_probs=25.6
Q ss_pred ceEEEEEEeCCHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIYVEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
|+|+|..++.|.++-++|.+.+.+.+.+.
T Consensus 1 P~I~I~~~grt~eqK~~L~~~it~~~~~~ 29 (62)
T 3m20_A 1 PVLIVYGPKLDVGKKREFVERLTSVAAEI 29 (62)
T ss_dssp CEEEEECSCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 88999998899999999999999887653
No 16
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=69.03 E-value=5.4 Score=25.62 Aligned_cols=29 Identities=21% Similarity=0.470 Sum_probs=24.8
Q ss_pred ceEEEE-EEeCCHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIY-VEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy-~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
|+++|+ .++.|.+.-++|.+.+.+.+.+.
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~ 30 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANS 30 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 889998 47899999999999999887653
No 17
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=66.74 E-value=12 Score=28.32 Aligned_cols=38 Identities=24% Similarity=0.495 Sum_probs=29.9
Q ss_pred eEEE-ecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhh
Q psy232 260 RSFV-RPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 260 w~li-RpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
.+.| |-+.+|. =|-+.||.+.++|.++..+++.++..|
T Consensus 78 KivV~k~~~~e~-KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 78 KIFVRREGQDDI-KRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp EEEECCTTCSSC-EEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCc-ceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 3444 3245555 799999999999999999999988754
No 18
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=65.71 E-value=6.9 Score=25.01 Aligned_cols=29 Identities=28% Similarity=0.381 Sum_probs=24.8
Q ss_pred ceEEEEE-EeCCHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIYV-EAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy~-Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
|+++|++ ++.|.++-++|.+.+.+.+.+.
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~ 30 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKET 30 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 8899984 7899999999999999887653
No 19
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=61.87 E-value=7.4 Score=26.64 Aligned_cols=28 Identities=18% Similarity=0.275 Sum_probs=24.9
Q ss_pred ceEEEEE-EeCCHHHHHHHHHHHHHHHHh
Q psy232 270 DIVRIYV-EAETSEDVNALTEEIQQVVKT 297 (299)
Q Consensus 270 p~iriy~-Ea~~~~~~~~l~~~~~~~v~~ 297 (299)
|+|+|+. ++.|.+.-++|.+.+.+.+.+
T Consensus 2 P~I~I~~~~Grs~eqK~~L~~~it~~l~~ 30 (76)
T 3ej9_A 2 PMISCDMRYGRTDEQKRALSAGLLRVISE 30 (76)
T ss_dssp CEEEEEEETTCCHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 8999987 789999999999999988765
No 20
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=59.79 E-value=10 Score=24.81 Aligned_cols=29 Identities=21% Similarity=0.428 Sum_probs=24.1
Q ss_pred ceEEEEE-EeCCHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIYV-EAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy~-Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
|+++|+. |+.|.+.-++|.+.+.+.+.+.
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~ 30 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHET 30 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 7888854 7899999999999999887653
No 21
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=57.51 E-value=8.2 Score=26.27 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=24.8
Q ss_pred ceEEEE-EEeC-CHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIY-VEAE-TSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy-~Ea~-~~~~~~~l~~~~~~~v~~~ 298 (299)
|+|+|. .++. |.++-++|.+.+.+.+.+.
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~ 31 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRH 31 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 889998 4788 9999999999999888653
No 22
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=55.78 E-value=12 Score=25.02 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=24.8
Q ss_pred ceEEEE-EEeCCHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIY-VEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy-~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
|+|+|. .|+.|.+.-++|.+.+.+.+.+.
T Consensus 2 P~I~I~~~~grs~eqK~~L~~~it~~l~~~ 31 (72)
T 3mb2_A 2 LLLRITMLEGRSTEQKAELARALSAAAAAA 31 (72)
T ss_dssp EEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 889997 47899999999999999887653
No 23
>2yqr_A KIAA0907 protein; structure genomics, KH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.17 E-value=29 Score=26.10 Aligned_cols=27 Identities=19% Similarity=0.362 Sum_probs=20.9
Q ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHH
Q psy232 269 EDIVRIYVEAETSEDVNALTEEIQQVVK 296 (299)
Q Consensus 269 Ep~iriy~Ea~~~~~~~~l~~~~~~~v~ 296 (299)
||+ ||++.|.+.+.+++-.+.+.+++.
T Consensus 72 e~l-~V~I~a~~~e~i~~A~~~Ie~Ll~ 98 (119)
T 2yqr_A 72 EPM-YIYISHPKPEGLAAAKKLCENLLQ 98 (119)
T ss_dssp SBC-EEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCc-EEEEEeCCHHHHHHHHHHHHHHhh
Confidence 565 999999999987777776666664
No 24
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=52.63 E-value=16 Score=23.14 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=25.1
Q ss_pred CcceEEEEE-EeCCHHHHHHHHHHHHHHHHhh
Q psy232 268 TEDIVRIYV-EAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 268 TEp~iriy~-Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
+=|+++|+. ++.+.++.++|.+.+.+.+.+.
T Consensus 2 ~MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~ 33 (63)
T 2x4k_A 2 MMPIVNVKLLEGRSDEQLKNLVSEVTDAVEKT 33 (63)
T ss_dssp CCCEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 358999996 5789998999999988887653
No 25
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=49.73 E-value=22 Score=22.74 Aligned_cols=29 Identities=10% Similarity=0.304 Sum_probs=24.3
Q ss_pred ceEEEE-EEeCCHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIY-VEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy-~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
|++.|. .++.|.++-++|.+.+.+.+.+.
T Consensus 2 P~i~i~~~~g~s~eqk~~l~~~lt~~l~~~ 31 (64)
T 3abf_A 2 VVLKVTLLEGRPPEKKRELVRRLTEMASRL 31 (64)
T ss_dssp EEEEEEEETTCCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 788888 47789998999999999888764
No 26
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=44.19 E-value=29 Score=22.64 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=23.3
Q ss_pred ceEEEEE--E--eCCHHHHHHHHHHHHHHHHhh
Q psy232 270 DIVRIYV--E--AETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 270 p~iriy~--E--a~~~~~~~~l~~~~~~~v~~~ 298 (299)
|+++|.+ | +.|.++-++|.+.+.+.+.+.
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~ 33 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMVKV 33 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6777765 4 799999999999999887653
No 27
>2jpi_A Hypothetical protein; alpha-helix/beta-sheet, structural genomics, ontario centre for structural proteomics, OCSP; NMR {Pseudomonas aeruginosa}
Probab=43.90 E-value=20 Score=26.99 Aligned_cols=44 Identities=7% Similarity=0.195 Sum_probs=32.7
Q ss_pred hhhcCCceEEEecCCCcceEEEEEEeCCHHHHHHHHHHHHHHHHhh
Q psy232 253 VAKFNNARSFVRPSGTEDIVRIYVEAETSEDVNALTEEIQQVVKTY 298 (299)
Q Consensus 253 k~~~~~gw~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~~ 298 (299)
++.|+.|-+-+.+ ....++|.+||.+++.+..+.+-+...|..|
T Consensus 60 ~i~fp~G~~~l~a--~~~~L~i~v~A~d~e~L~~lk~VVa~HL~rF 103 (118)
T 2jpi_A 60 FIDFGDSNCELLA--HPDHVLMILNSPDEDSLAHMQNVVADHLQRM 103 (118)
T ss_dssp EEECSSSCEEEEE--ETTEEEEEEEESSHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCeEEEEEe--cCCeEEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 4455556544433 4457889999999999999999988888776
No 28
>3qay_A Endolysin; amidase A/B fold, lyase; 2.00A {Clostridium phage PHICD27}
Probab=43.09 E-value=22 Score=28.62 Aligned_cols=13 Identities=8% Similarity=0.005 Sum_probs=10.4
Q ss_pred CCCcEEEEeCCCC
Q psy232 132 NLNNKYLSVDGDA 144 (299)
Q Consensus 132 ~~adlGia~DgDg 144 (299)
.+||+.+++=.|+
T Consensus 76 ~~aDlfISIH~Na 88 (180)
T 3qay_A 76 GGYDLLIELHLNA 88 (180)
T ss_dssp SCCSEEEEEEEEC
T ss_pred cCCCEEEEeeeCC
Confidence 6899998887666
No 29
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=39.46 E-value=49 Score=23.66 Aligned_cols=29 Identities=10% Similarity=0.100 Sum_probs=24.9
Q ss_pred cceEEEEEEeCCHHHHHHHHHHHHHHHHh
Q psy232 269 EDIVRIYVEAETSEDVNALTEEIQQVVKT 297 (299)
Q Consensus 269 Ep~iriy~Ea~~~~~~~~l~~~~~~~v~~ 297 (299)
-|..||-+.+.|.+.+.+.++...+.+.+
T Consensus 51 aP~Y~i~~~~~D~k~ge~~L~~ai~~i~~ 79 (93)
T 2qn6_B 51 APRYRVDVVGTNPKEASEALNQIISNLIK 79 (93)
T ss_dssp TTEEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEecCHHHHHHHHHHHHHHHHH
Confidence 49999999999999999999887776643
No 30
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=35.00 E-value=53 Score=23.50 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=28.0
Q ss_pred CCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
+.-+|++-|..|.-+..+..+|+..|. +++.+.
T Consensus 55 ~~~~ivv~C~~G~rS~~aa~~L~~~G~--~~~~l~ 87 (103)
T 3iwh_A 55 KNEIYYIVCAGGVRSAKVVEYLEANGI--DAVNVE 87 (103)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHTTTC--EEEEET
T ss_pred CCCeEEEECCCCHHHHHHHHHHHHcCC--CEEEec
Confidence 456799999999999999999999999 877654
No 31
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=34.69 E-value=67 Score=21.76 Aligned_cols=27 Identities=30% Similarity=0.420 Sum_probs=22.8
Q ss_pred eEEEEEEeCCHHHHHHHHHHHHHHHHh
Q psy232 271 IVRIYVEAETSEDVNALTEEIQQVVKT 297 (299)
Q Consensus 271 ~iriy~Ea~~~~~~~~l~~~~~~~v~~ 297 (299)
-+.|.+-|++.+++++|++.+.+++++
T Consensus 49 nvqitisaendeqakelleliarllqk 75 (96)
T 2jvf_A 49 NVQITISAENDEQAKELLELIARLLQK 75 (96)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEecChHHHHHHHHHHHHHHHH
Confidence 356788889999999999999988865
No 32
>3ej9_B Beta-subunit of trans-3-chloroacrylic acid dehalo; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej7_B 3ej3_B 1s0y_B
Probab=33.40 E-value=65 Score=21.73 Aligned_cols=28 Identities=7% Similarity=0.122 Sum_probs=22.7
Q ss_pred ceEEEE-EEeCCHHHHHHHHHHHHHHHHh
Q psy232 270 DIVRIY-VEAETSEDVNALTEEIQQVVKT 297 (299)
Q Consensus 270 p~iriy-~Ea~~~~~~~~l~~~~~~~v~~ 297 (299)
|++.+| .|+.|.++-++|++.+.+.+.+
T Consensus 1 Pi~qi~i~EGRT~EQK~~lI~~VT~a~~e 29 (70)
T 3ej9_B 1 PFIECHIATGLSVARKQQLIRDVIDVTNK 29 (70)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 566666 6999999999999998887643
No 33
>1k1g_A SF1-BO isoform; splicing, branch point sequence, protein/RNA recognition, complex E, KH domain, QUA2 homology; NMR {Homo sapiens} SCOP: d.51.1.1
Probab=32.84 E-value=69 Score=24.36 Aligned_cols=27 Identities=30% Similarity=0.430 Sum_probs=22.7
Q ss_pred eEEEEEEeCCHHHHHHHHHHHHHHHHh
Q psy232 271 IVRIYVEAETSEDVNALTEEIQQVVKT 297 (299)
Q Consensus 271 ~iriy~Ea~~~~~~~~l~~~~~~~v~~ 297 (299)
-++|+++|.+.+.+++-.+.+.+++..
T Consensus 73 ~lhV~I~a~~~e~~~~A~~~I~~ll~~ 99 (131)
T 1k1g_A 73 PLHALVTANTMENVKKAVEQIRNILKQ 99 (131)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred CeEEEEEECCHHHHHHHHHHHHHHHhc
Confidence 479999999999988888888887754
No 34
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=31.20 E-value=63 Score=23.16 Aligned_cols=29 Identities=21% Similarity=0.445 Sum_probs=22.0
Q ss_pred EeCCCCCeeEEeeeCCCCCeeeechHHHHHHHHHHHHHHH
Q psy232 139 SVDGDADRIIYWYPNEDNTIHLLDGDRIAVLFAMYINELI 178 (299)
Q Consensus 139 a~DgDgDR~~~~~vd~~G~~~~l~gd~~~~Lla~~ll~~~ 178 (299)
-=|-||||+.+ -+.+++-|++.+|+....
T Consensus 60 YEDE~gDRITV-----------RSDeE~kAMlsyy~~~~~ 88 (106)
T 2npt_A 60 YEDEDGDRITV-----------RSDEEMKAMLSYYYSTVM 88 (106)
T ss_dssp EECTTSCEEEE-----------CSHHHHHHHHHHHHHHHH
T ss_pred eccccCCeeEE-----------cchHHHHHHHHHHHHHHH
Confidence 35888898877 467888899988876554
No 35
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=28.84 E-value=79 Score=22.10 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=28.7
Q ss_pred CCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
+.-+|++-|..|..+..+...|+.+|. ++..+.
T Consensus 55 ~~~~iv~yC~~g~rs~~a~~~L~~~G~--~v~~l~ 87 (103)
T 3eme_A 55 KNEIYYIVCAGGVRSAKVVEYLEANGI--DAVNVE 87 (103)
T ss_dssp TTSEEEEECSSSSHHHHHHHHHHTTTC--EEEEET
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCC--CeEEeC
Confidence 456799999999989999999999999 888776
No 36
>2bl5_A MGC83862 protein, quaking protein; STAR proteins, GSG proteins, RNA binding; NMR {Xenopus laevis} SCOP: d.51.1.1
Probab=28.16 E-value=1.1e+02 Score=23.69 Aligned_cols=29 Identities=17% Similarity=0.297 Sum_probs=16.6
Q ss_pred CcceEEEEEEeCCHH-HHHHHHHHHHHHHHh
Q psy232 268 TEDIVRIYVEAETSE-DVNALTEEIQQVVKT 297 (299)
Q Consensus 268 TEp~iriy~Ea~~~~-~~~~l~~~~~~~v~~ 297 (299)
.|| ++|+++|.+.+ .+..-++...+.|++
T Consensus 68 ~ep-LHV~Isa~~~~~~~~~~l~~A~~~I~~ 97 (140)
T 2bl5_A 68 NED-LHVLITVEDAQNRAELKLKRAVEEVKK 97 (140)
T ss_dssp TSC-CEEEEEECSCCHHHHHHHHHHHHHHHH
T ss_pred CCC-cEEEEEecCchhhHHHHHHHHHHHHHH
Confidence 345 68999997653 344444444444443
No 37
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=26.80 E-value=75 Score=22.14 Aligned_cols=33 Identities=6% Similarity=-0.022 Sum_probs=28.6
Q ss_pred CCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
+.-+|++-|..|..+..+..+|+.+|. ++..+.
T Consensus 55 ~~~~ivvyC~~g~rs~~a~~~L~~~G~--~v~~l~ 87 (100)
T 3foj_A 55 DNETYYIICKAGGRSAQVVQYLEQNGV--NAVNVE 87 (100)
T ss_dssp TTSEEEEECSSSHHHHHHHHHHHTTTC--EEEEET
T ss_pred CCCcEEEEcCCCchHHHHHHHHHHCCC--CEEEec
Confidence 456799999999989999999999999 888776
No 38
>3leq_A Uncharacterized protein CVNB5; PSI, MCSG, structural genomics, midwest center for structura genomics, protein structure initiative; 1.85A {Streptomyces avermitilis}
Probab=26.05 E-value=86 Score=23.45 Aligned_cols=44 Identities=5% Similarity=0.074 Sum_probs=31.5
Q ss_pred hhhhcCCceEEEecCCCcceEEEEEEeC-CHHHHHHHHHHHHHHH
Q psy232 252 SVAKFNNARSFVRPSGTEDIVRIYVEAE-TSEDVNALTEEIQQVV 295 (299)
Q Consensus 252 ik~~~~~gw~liRpSgTEp~iriy~Ea~-~~~~~~~l~~~~~~~v 295 (299)
+-+++++||+++-+-|..-++-|.++.. +...+..-++...+.|
T Consensus 72 v~ve~~~G~l~v~~ag~~a~L~vla~~~a~lG~v~~em~~~v~ri 116 (126)
T 3leq_A 72 ALIEMGKGYLILTAAGPGAHLVVLTRQGADVGVVAYQMNMLVKKI 116 (126)
T ss_dssp EEEECSSCEEEEEESSTTEEEEEEECTTCCHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCEEEEEEeCCCcEEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 4467789999999999999999998765 5555444444444433
No 39
>3voq_A Target of rapamycin complex 2 subunit mapkap1; PH domain, membrane protein; 2.00A {Homo sapiens}
Probab=25.28 E-value=61 Score=24.57 Aligned_cols=30 Identities=20% Similarity=0.468 Sum_probs=24.1
Q ss_pred CCCcceEEEEEEeCCHHHHHHHHHHHHHHHHh
Q psy232 266 SGTEDIVRIYVEAETSEDVNALTEEIQQVVKT 297 (299)
Q Consensus 266 SgTEp~iriy~Ea~~~~~~~~l~~~~~~~v~~ 297 (299)
+++ .-=|.++||++ +.|+++..++..+++-
T Consensus 91 ~~~-~~KryDFEa~~-~~A~EIV~kin~ILe~ 120 (125)
T 3voq_A 91 SNH-DYKHLYFESDA-ATVNEIVLKVNYILES 120 (125)
T ss_dssp ETT-EEEEEEEEECH-HHHHHHHHHHHHHHHT
T ss_pred CCC-CcccceeEcCc-ccHHHHHHHHhhheee
Confidence 444 44589999999 9999999999888763
No 40
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=24.71 E-value=73 Score=22.68 Aligned_cols=33 Identities=12% Similarity=-0.012 Sum_probs=28.8
Q ss_pred CCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
+.-+|++-|..|.-+..+..+|+.+|. ++..+.
T Consensus 54 ~~~~ivvyC~~G~rs~~aa~~L~~~G~--~v~~l~ 86 (108)
T 3gk5_A 54 RDKKYAVICAHGNRSAAAVEFLSQLGL--NIVDVE 86 (108)
T ss_dssp TTSCEEEECSSSHHHHHHHHHHHTTTC--CEEEET
T ss_pred CCCeEEEEcCCCcHHHHHHHHHHHcCC--CEEEEc
Confidence 445799999999988899999999999 888886
No 41
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=24.22 E-value=1.1e+02 Score=22.80 Aligned_cols=34 Identities=6% Similarity=-0.142 Sum_probs=28.3
Q ss_pred CCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
+.-+||+-|..|.-+..+..+|+.+|.. +|..+.
T Consensus 81 ~~~~ivvyC~~G~rS~~aa~~L~~~G~~-~v~~l~ 114 (137)
T 1qxn_A 81 PEKPVVVFCKTAARAALAGKTLREYGFK-TIYNSE 114 (137)
T ss_dssp TTSCEEEECCSSSCHHHHHHHHHHHTCS-CEEEES
T ss_pred CCCeEEEEcCCCcHHHHHHHHHHHcCCc-ceEEEc
Confidence 4457999999999999999999999984 577775
No 42
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=24.14 E-value=47 Score=26.04 Aligned_cols=31 Identities=10% Similarity=-0.099 Sum_probs=22.6
Q ss_pred CeEEEcCCCC--CcHHHHHHHHHHcCCCceEEEEc
Q psy232 68 QDIYFDGANG--VGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 68 ~kIvvD~~nG--~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
+||++-+-|+ .-...+...|++.|. +|+-+-
T Consensus 2 MkIaigsDhaG~~lK~~i~~~L~~~G~--eV~D~G 34 (149)
T 2vvr_A 2 KKIAFGCDHVGFILKHEIVAHLVERGV--EVIDKG 34 (149)
T ss_dssp CEEEEEECTTGGGGHHHHHHHHHHTTC--EEEECC
T ss_pred cEEEEEeCchhHHHHHHHHHHHHHCCC--EEEEeC
Confidence 4788877776 345568888999998 777653
No 43
>3szp_A Transcriptional regulator, LYSR family; winged helix-turn helix, DNA-binding, transcription factor; 2.20A {Vibrio cholerae} PDB: 3t1b_B
Probab=23.53 E-value=36 Score=28.11 Aligned_cols=70 Identities=4% Similarity=-0.060 Sum_probs=34.7
Q ss_pred ceEEECCCCCCCCCcc-cccHHHHHHHHHHHHHHhhhhhhccCCCCCCeEEEcCCCCCcHHHHHHHHHHcC
Q psy232 22 DIYFDGANGNHNVNSR-VFEESEYFTHFGNAYLSYQKFLLTDNKSYSQDIYFDGANGVGGVKIKELQKIIE 91 (299)
Q Consensus 22 GiK~~~~~G~~~~~~~-~~~~~~Y~~~l~~~~~~~~~~i~~~~~~~~~kIvvD~~nG~~~~~~~~ll~~lg 91 (299)
|.++|...|..+.... -...-.|.+.+.+.++...+.+........-+|-+-+..+.+...++.++..+.
T Consensus 44 g~~Lf~R~~~~~~lT~~G~~l~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~Ig~~~~~~~~~l~~~l~~f~ 114 (291)
T 3szp_A 44 NLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAPSNLTKRMMMPMFNAFM 114 (291)
T ss_dssp TCCCEEEETTEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTSCCSSCEEEEEEEETTTHHHHTHHHHHHHH
T ss_pred CCceEeecCCCcccCHhHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEEEEeccHHHHHHHHHHHHHHHH
Confidence 5555555554433211 123345555555555542222221111223346666666777778888877663
No 44
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=23.11 E-value=1.3e+02 Score=21.77 Aligned_cols=33 Identities=6% Similarity=-0.190 Sum_probs=27.5
Q ss_pred CCCeEEEcCCCCCc--HHHHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVG--GVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~--~~~~~~ll~~lg~~~~v~~ln 100 (299)
..-+||+-|..|.- +..+..+|+.+|. ++..+.
T Consensus 70 ~~~~ivvyC~~g~r~~s~~a~~~L~~~G~--~v~~l~ 104 (124)
T 3flh_A 70 PAKTYVVYDWTGGTTLGKTALLVLLSAGF--EAYELA 104 (124)
T ss_dssp TTSEEEEECSSSSCSHHHHHHHHHHHHTC--EEEEET
T ss_pred CCCeEEEEeCCCCchHHHHHHHHHHHcCC--eEEEeC
Confidence 45679999999986 7888999999999 877765
No 45
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=23.03 E-value=49 Score=26.41 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=24.6
Q ss_pred CCCeEEEcCCCCCcHH--HHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVGGV--KIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~--~~~~ll~~lg~~~~v~~ln 100 (299)
.++||++-+-|+.... .+...|++.|. +|+-+-
T Consensus 20 ~~MkIaIgsDhaG~~lK~~i~~~L~~~G~--eV~D~G 54 (166)
T 3s5p_A 20 GSMKVAFASDHGGRDLRMFLQQRASAHGY--EVMDLG 54 (166)
T ss_dssp TTCEEEEEECGGGHHHHHHHHHHHHHTTC--EEEEEE
T ss_pred CceEEEEEECchHHHHHHHHHHHHHHCCC--EEEEcC
Confidence 4589999998865333 57778889998 877664
No 46
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=22.90 E-value=37 Score=27.24 Aligned_cols=34 Identities=12% Similarity=0.061 Sum_probs=23.2
Q ss_pred CCCCeEEEcCCCCCcH--HHHHHHHHHcCCCceEEEEc
Q psy232 65 SYSQDIYFDGANGVGG--VKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 65 ~~~~kIvvD~~nG~~~--~~~~~ll~~lg~~~~v~~ln 100 (299)
..++||++-+-|+-.. ..+...|++.|. +|+-+-
T Consensus 18 ~~~MkIaIgsDhaG~~lK~~i~~~L~~~G~--eV~D~G 53 (169)
T 3ph3_A 18 GSHMKIGIGSDHGGYNLKREIADFLKKRGY--EVIDFG 53 (169)
T ss_dssp ---CEEEEEECGGGHHHHHHHHHHHHHTTC--EEEECC
T ss_pred CCCCEEEEEeCchHHHHHHHHHHHHHHCCC--EEEEcC
Confidence 3578999999886433 357778889998 776553
No 47
>3h7h_B Transcription elongation factor SPT5; helices surrounding beta sheet, activator, ME binding, nucleus, repressor, transcription regulation; 1.55A {Homo sapiens}
Probab=22.58 E-value=48 Score=24.34 Aligned_cols=29 Identities=24% Similarity=0.241 Sum_probs=19.7
Q ss_pred eEEEecCCCcceEEEEEEeCCHHHHHHHHHHH
Q psy232 260 RSFVRPSGTEDIVRIYVEAETSEDVNALTEEI 291 (299)
Q Consensus 260 w~liRpSgTEp~iriy~Ea~~~~~~~~l~~~~ 291 (299)
-++.+++- .= -||+||+++..+++.++-+
T Consensus 43 Si~~~~~l-kG--yIyVEA~~~~~V~~ai~gi 71 (106)
T 3h7h_B 43 SVVAPEHV-KG--YIYVEAYKQTHVKQAIEGV 71 (106)
T ss_dssp EEEECTTC-CS--EEEEEESSHHHHHHHHTTC
T ss_pred EEEecCCC-ce--EEEEEeCCHHHHHHHHhcc
Confidence 45555542 22 4899999999888777543
No 48
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=22.38 E-value=94 Score=23.03 Aligned_cols=33 Identities=12% Similarity=0.038 Sum_probs=27.2
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 67 SQDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 67 ~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
.-+|++-|..|.-+..+..+|+.+|.. +|..+.
T Consensus 74 ~~~ivv~C~sG~RS~~aa~~L~~~G~~-~v~~l~ 106 (134)
T 1vee_A 74 NTTLYILDKFDGNSELVAELVALNGFK-SAYAIK 106 (134)
T ss_dssp GCEEEEECSSSTTHHHHHHHHHHHTCS-EEEECT
T ss_pred CCEEEEEeCCCCcHHHHHHHHHHcCCc-ceEEec
Confidence 457999999999999999999999983 466554
No 49
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=22.15 E-value=77 Score=21.77 Aligned_cols=31 Identities=3% Similarity=-0.100 Sum_probs=25.9
Q ss_pred CeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 68 QDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 68 ~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
-+|++-|..|.-+..+...|+.+|. ++..+.
T Consensus 54 ~~ivvyC~~g~rs~~a~~~L~~~G~--~v~~l~ 84 (94)
T 1wv9_A 54 RPLLLVCEKGLLSQVAALYLEAEGY--EAMSLE 84 (94)
T ss_dssp SCEEEECSSSHHHHHHHHHHHHHTC--CEEEET
T ss_pred CCEEEEcCCCChHHHHHHHHHHcCC--cEEEEc
Confidence 5799999999988889999999999 755554
No 50
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=21.91 E-value=3.2e+02 Score=22.47 Aligned_cols=74 Identities=12% Similarity=0.022 Sum_probs=39.3
Q ss_pred ecCCCCCCCCCceEEECCCCCCCCCcccccHHHHHHHHHHHHHHhhhhhhccCCCCCCeEEEcCCCCCcHHHHHHHHHHc
Q psy232 11 ILNLYNKSYSQDIYFDGANGNHNVNSRVFEESEYFTHFGNAYLSYQKFLLTDNKSYSQDIYFDGANGVGGVKIKELQKII 90 (299)
Q Consensus 11 iTaSHNP~~~nGiK~~~~~G~~~~~~~~~~~~~Y~~~l~~~~~~~~~~i~~~~~~~~~kIvvD~~nG~~~~~~~~ll~~l 90 (299)
|..|+..+..+++.+.-..|.............+++.+...+ .+-+-|+|.+.|+|.... .+..+
T Consensus 77 i~~~w~~~~~~~~~~~l~p~~~fgtg~~~tt~~~~~~l~~~~-------------~~~~~VLDiGcG~G~l~~--~la~~ 141 (254)
T 2nxc_A 77 VLAPWHTWEGAEIPLVIEPGMAFGTGHHETTRLALKALARHL-------------RPGDKVLDLGTGSGVLAI--AAEKL 141 (254)
T ss_dssp EECTTCCCCSSSEEEECCCC-----CCSHHHHHHHHHHHHHC-------------CTTCEEEEETCTTSHHHH--HHHHT
T ss_pred EeCCCCCCCCCceEEEECCCccccCCCCHHHHHHHHHHHHhc-------------CCCCEEEEecCCCcHHHH--HHHHh
Confidence 445554446667777655554443333333344444443221 234578999999977543 34557
Q ss_pred CCCceEEEEcc
Q psy232 91 ESKLKIEVYNQ 101 (299)
Q Consensus 91 g~~~~v~~ln~ 101 (299)
|. +++.+..
T Consensus 142 g~--~v~gvDi 150 (254)
T 2nxc_A 142 GG--KALGVDI 150 (254)
T ss_dssp TC--EEEEEES
T ss_pred CC--eEEEEEC
Confidence 87 7777753
No 51
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=21.03 E-value=1.2e+02 Score=21.23 Aligned_cols=34 Identities=3% Similarity=-0.053 Sum_probs=27.2
Q ss_pred CCCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEc
Q psy232 66 YSQDIYFDGANGVGGVKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 66 ~~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln 100 (299)
+.-+||+-|..|.-+..+...|+.+|.. ++..+.
T Consensus 57 ~~~~ivvyc~~g~rs~~a~~~L~~~G~~-~v~~l~ 90 (108)
T 1gmx_A 57 FDTPVMVMCYHGNSSKGAAQYLLQQGYD-VVYSID 90 (108)
T ss_dssp TTSCEEEECSSSSHHHHHHHHHHHHTCS-SEEEET
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHcCCc-eEEEec
Confidence 3457888899999888999999999983 466664
No 52
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=20.62 E-value=1.3e+02 Score=22.72 Aligned_cols=34 Identities=9% Similarity=-0.006 Sum_probs=27.4
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHcCCCceEEEEcc
Q psy232 67 SQDIYFDGANGVGGVKIKELQKIIESKLKIEVYNQ 101 (299)
Q Consensus 67 ~~kIvvD~~nG~~~~~~~~ll~~lg~~~~v~~ln~ 101 (299)
.-+||+-|..|.-+..+..+|+.+|.. +|..+..
T Consensus 80 ~~~ivvyC~~G~rS~~aa~~L~~~G~~-~v~~l~G 113 (148)
T 2fsx_A 80 ERPVIFLCRSGNRSIGAAEVATEAGIT-PAYNVLD 113 (148)
T ss_dssp -CCEEEECSSSSTHHHHHHHHHHTTCC-SEEEETT
T ss_pred CCEEEEEcCCChhHHHHHHHHHHcCCc-ceEEEcC
Confidence 456899999999888999999999984 5777763
No 53
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=20.46 E-value=69 Score=26.72 Aligned_cols=32 Identities=16% Similarity=0.108 Sum_probs=24.1
Q ss_pred CCeEEEcCCCCCcH------HHHHHHHHHcCCCceEEEEc
Q psy232 67 SQDIYFDGANGVGG------VKIKELQKIIESKLKIEVYN 100 (299)
Q Consensus 67 ~~kIvvD~~nG~~~------~~~~~ll~~lg~~~~v~~ln 100 (299)
++||++-+-|+... ..+...|++.|. +|+-+-
T Consensus 3 ~MkIaIgsDha~~lKn~ilk~~i~~~L~~~G~--eV~D~G 40 (216)
T 2ppw_A 3 AMKIALINENSQASKNHIIYDSLKEATDKKGY--QLFNYG 40 (216)
T ss_dssp CCEEEECCCTTTGGGHHHHHHHHHHHHHHHTC--EEEECS
T ss_pred CcEEEEEcCChHhhhhhhHHHHHHHHHHHCCC--EEEEeC
Confidence 48999999888432 367788889998 777663
Done!