Query psy2324
Match_columns 170
No_of_seqs 128 out of 801
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 21:43:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2324.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2324hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qli_A Coenzyme A transferase; 100.0 2.2E-57 7.6E-62 410.9 14.4 167 2-170 245-421 (455)
2 3eh7_A 4-hydroxybutyrate COA-t 100.0 1E-54 3.4E-59 390.7 14.3 167 2-170 223-401 (434)
3 3gk7_A 4-hydroxybutyrate COA-t 100.0 1.1E-53 3.8E-58 385.8 15.0 169 2-170 219-402 (448)
4 2oas_A ATOA, 4-hydroxybutyrate 100.0 1.2E-53 4E-58 383.0 13.7 167 2-170 214-392 (436)
5 3d3u_A 4-hydroxybutyrate COA-t 100.0 3.2E-48 1.1E-52 347.0 13.5 167 2-170 220-398 (439)
6 2g39_A Acetyl-COA hydrolase; c 100.0 4E-44 1.4E-48 326.4 7.8 153 2-170 267-435 (497)
7 4eu9_A Succinyl-COA:acetate co 100.0 2.6E-44 8.9E-49 327.6 3.3 156 2-170 273-441 (514)
8 2nvv_A Acetyl-COA hydrolase/tr 100.0 7.1E-43 2.4E-47 318.8 7.6 153 2-170 262-431 (506)
9 1xr4_A Putative citrate lyase 100.0 2.9E-37 9.8E-42 282.0 2.2 149 2-169 280-445 (509)
10 2hj0_A Putative citrate lyase, 100.0 2.3E-36 7.7E-41 276.7 1.3 149 2-169 283-449 (519)
11 3k6m_A Succinyl-COA:3-ketoacid 99.9 5.6E-23 1.9E-27 187.0 1.5 141 1-169 285-438 (481)
12 2ahu_A Putative enzyme YDIF; C 99.8 3.6E-22 1.2E-26 183.0 -0.6 132 1-169 310-474 (531)
13 1poi_B Glutaconate coenzyme A- 99.8 3.9E-21 1.3E-25 162.7 4.3 135 1-169 30-197 (260)
14 3rrl_B Succinyl-COA:3-ketoacid 99.8 1E-20 3.5E-25 155.7 0.5 139 1-169 24-175 (207)
15 2hj0_A Putative citrate lyase, 80.0 9.6 0.00033 34.6 9.5 135 5-162 82-229 (519)
16 1xr4_A Putative citrate lyase 76.7 5.9 0.0002 35.9 7.0 136 2-162 72-226 (509)
17 2hjq_A Hypothetical protein YQ 74.6 2.1 7.2E-05 31.7 2.9 21 52-72 19-44 (111)
18 1k6d_A Acetate COA-transferase 51.2 7.3 0.00025 31.1 2.2 58 1-67 30-92 (220)
19 2g39_A Acetyl-COA hydrolase; c 48.2 19 0.00064 32.5 4.6 93 2-106 41-143 (497)
20 3eh7_A 4-hydroxybutyrate COA-t 37.8 22 0.00074 31.5 3.3 113 3-141 40-158 (434)
21 3rrl_A Succinyl-COA:3-ketoacid 36.7 11 0.00036 30.8 1.0 57 1-66 33-94 (235)
22 1poi_A Glutaconate coenzyme A- 36.0 37 0.0013 28.6 4.3 57 1-66 29-93 (317)
23 3cdk_A Succinyl-COA:3-ketoacid 35.6 29 0.00098 28.1 3.4 57 1-66 33-94 (241)
24 2nvv_A Acetyl-COA hydrolase/tr 28.2 48 0.0016 29.9 3.9 80 15-106 54-138 (506)
25 3hy3_A 5-formyltetrahydrofolat 22.2 2.2E+02 0.0076 21.8 6.4 67 100-167 133-201 (203)
No 1
>3qli_A Coenzyme A transferase; COEN transferase; 1.90A {Yersinia pestis} PDB: 3qlk_A 3s8d_A
Probab=100.00 E-value=2.2e-57 Score=410.88 Aligned_cols=167 Identities=30% Similarity=0.565 Sum_probs=159.6
Q ss_pred chHHHHHhcccCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceeccHH
Q psy2324 2 IPEAILSNIKHQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSNDPA 81 (170)
Q Consensus 2 ipnAV~~~L~~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN~P~ 81 (170)
|||||+..|.++||||+|||||+|++++|+++|++|+++|++++|+++++|++|+++||+|+|+||.|+|+|++|+|||+
T Consensus 245 ip~Av~~~L~~~~~lgi~tE~~~d~~~dLi~aG~i~~~~K~~~~G~~v~~f~~gs~~ly~~~~~np~~~~~~~~y~N~p~ 324 (455)
T 3qli_A 245 LPNLVCGVLKDRNDLGIHTEVLNPGLVDLIRRGVVTNQRKTLDRGRSVFTFAMGQQEMYEYLNDHPAIFSRPVDYVNDPH 324 (455)
T ss_dssp HHHHHHHHGGGCCSBEEBCSEECHHHHHHHHHTCBCCTTCSSSTTSEEESEECCCHHHHHHHTTCTTEEECBHHHHTCHH
T ss_pred HHHHHHHhcCcCCCeEEEcCCcccchHHHHHCCCcccccccccCCceEEEeccchHHHHHHHhhCCCEEEeeccccCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCC------CCCCC---
Q psy2324 82 IIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNS------MPLLG--- 152 (170)
Q Consensus 82 ~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~------~~~l~--- 152 (170)
+|+|+++|+|||+|+||||+||||++++|++++||+|||.||+|||++|+| ||+||+||||+++ .|.+.
T Consensus 325 ~i~~~~~~i~in~a~evd~~G~v~~~~~~~~~~~G~GG~~Df~~gA~~s~g--gk~ii~~~s~~k~G~is~Iv~~~~~~v 402 (455)
T 3qli_A 325 IIAQNDNVVSINATLQIDLTGACNSEHMLGHQYSASGGQLDFVRGAYASKG--GRSIIATPSTAAKGTVSRIIPRIDGPV 402 (455)
T ss_dssp HHTTSTTEEEEEECSEEETTSCEECCCSTTCCCGGGSSHHHHHHHHHHSTT--CEEEEECCSEETTTTEESEESCCSSSC
T ss_pred HHhCCCCcEEeeeeEEEecCCCeeeeccCCeeecCcChhHHHHHHHhhcCC--CcEEEEEeCccCCCCCCeEeccCCCCc
Confidence 999999999999999999999999999999999999999999999999999 9999999999984 24443
Q ss_pred -CCCCCCceEEeeeeeccC
Q psy2324 153 -SNPGPPDYQASAWKIGLI 170 (170)
Q Consensus 153 -s~~~~~~~~~te~gia~~ 170 (170)
+.-+.+||||||||||++
T Consensus 403 tt~~~~v~~vvTE~Gva~l 421 (455)
T 3qli_A 403 TTPRIDTHYIVTEFGAVNL 421 (455)
T ss_dssp SBCTTTCCEEEETTEEEEC
T ss_pred ccCcccccEEEeccEEEEC
Confidence 344599999999999974
No 2
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=100.00 E-value=1e-54 Score=390.67 Aligned_cols=167 Identities=38% Similarity=0.714 Sum_probs=160.1
Q ss_pred chHHHHHhcccCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceeccHH
Q psy2324 2 IPEAILSNIKHQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSNDPA 81 (170)
Q Consensus 2 ipnAV~~~L~~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN~P~ 81 (170)
|||||+..|.+++|||+||||++|++++|+|+|++++.+|++++|+++++|++|+++||+|+++||.+.|+|++|+|||+
T Consensus 223 ip~AV~~~L~~~~~lgi~tE~~~d~~~~lie~G~i~~~~k~~~~g~~~~~f~~G~~~~y~~~~~np~~~~~~~~~~n~p~ 302 (434)
T 3eh7_A 223 IPDAALLFLKDKKDLGIHTEMFSDGVVELVRSGVITGKKKTLHPGKMVATFLMGSEDVYHFIDKNPDVELYPVDYVNDPR 302 (434)
T ss_dssp HHHHHHHTTTTCCSBEEECSEECHHHHHHHHTTSBCCTTCSSSTTCEEESEECCCHHHHHHHTTCTTEEECCHHHHTCHH
T ss_pred HHHHHHHHhhhcCCceEEccCcchhHHHHHHCCCccceeecccCCceeEeecchHHHHHHHHHhCCCeEEeccccccCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccC-C-----CCCCCCCC
Q psy2324 82 IIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDN-S-----MPLLGSNP 155 (170)
Q Consensus 82 ~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~-~-----~~~l~s~~ 155 (170)
+|+|+|+|+|||+|+||||+||||++++|++++||+|||.||+|||++|+| ||+|||+|||++ + .|.+..++
T Consensus 303 ~i~~~d~~i~in~a~evD~~G~vn~~~~g~~~~~G~GG~~Df~~ga~~s~g--gk~ii~~~st~~~G~is~iv~~~~~g~ 380 (434)
T 3eh7_A 303 VIAQNDNMVSINSCIEIDLMGQVVSECIGSKQFSGTGGQVDYVRGAAWSKN--GKSIMAIPSTAKNGTASRIVPIIAEGA 380 (434)
T ss_dssp HHTTSSSEEEEECCSEEETTCCEECCSTTSCCSBCCCTHHHHHHHHHHSTT--CEEEEECCSEETTTTEESEESSCCTTC
T ss_pred HHcCCCCcEEEehhheeccCCCeeeeccCCeeecccCchHHHhccccccCC--CceEEEEeeecCCCCCCeEeeCCCCCC
Confidence 999999999999999999999999999999999999999999999999999 999999999986 3 36666644
Q ss_pred ------CCCceEEeeeeeccC
Q psy2324 156 ------GPPDYQASAWKIGLI 170 (170)
Q Consensus 156 ------~~~~~~~te~gia~~ 170 (170)
+.+||||||||||++
T Consensus 381 ~v~~~~~~v~~vVTE~Gva~L 401 (434)
T 3eh7_A 381 AVTTLRNEVDYVVTEYGIAQL 401 (434)
T ss_dssp CEEECTTTCCEEEETTEEEEC
T ss_pred CceeCccceeEEEcccEEEEC
Confidence 399999999999974
No 3
>3gk7_A 4-hydroxybutyrate COA-transferase; alpha/beta protein; HET: SPD; 1.85A {Clostridium aminobutyricum} PDB: 3qdq_A*
Probab=100.00 E-value=1.1e-53 Score=385.81 Aligned_cols=169 Identities=42% Similarity=0.790 Sum_probs=161.8
Q ss_pred chHHHHHhcccCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceeccHH
Q psy2324 2 IPEAILSNIKHQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSNDPA 81 (170)
Q Consensus 2 ipnAV~~~L~~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN~P~ 81 (170)
||+||+..|.+++||++||||++|++++|+|+|++++++|.+++||.+++|++|+++||+|+|+||.|+|+|++|+|+|+
T Consensus 219 ip~aV~~~L~~~~~l~~~tE~~~d~~~~l~e~G~v~~~~k~i~~g~~~~~f~~G~~~~y~~~~~~~~~~~~~~~~~N~p~ 298 (448)
T 3gk7_A 219 IPDAVLSQLKDKKHLGIHSEMISDGVVDLYEAGVIDCSQKSIDKGKMAITFLMGTKRLYDFAANNPKVELKPVDYINHPS 298 (448)
T ss_dssp HHHHHHHTCTTCCSBEEEEEEECHHHHHHHHTTSBCCTTCSSSTTSEEEEEECSCHHHHHHHTTCTTEEECBHHHHTCHH
T ss_pred HHHHHHHHhhhcCCeeEEcCCChhhhhhhhhCCcccCchhcccCCccEEEEChhHHHHHHHhcCCCCEEEECCcccCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCCC---------CCCC
Q psy2324 82 IIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNSM---------PLLG 152 (170)
Q Consensus 82 ~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~~---------~~l~ 152 (170)
+|+|+++++|||+|+||||+||||++++|++++||+|||.||+|||++|+||+||+|||||||+++. |.+.
T Consensus 299 ~i~~l~~~iain~alevD~~G~vns~~~g~~~~~G~GG~~Df~~gA~~s~g~~~k~Ii~~~st~k~G~g~~is~IV~~~~ 378 (448)
T 3gk7_A 299 VVAQCSKMVCINACLQVDFMGQIVSDSIGTKQFSGVGGQVDFVRGASMSIDGKGKAIIAMPSVAKKKDGSMISKIVPFID 378 (448)
T ss_dssp HHTTSTTEEEEEECSEEETTCCEECSEETTEECSCCTTHHHHHHHHHTCTTSCCEEEEECCSEEECTTSCEEESEESSCC
T ss_pred HHhccCCcEEEehheeeccCCCeeeeccCCceecccCchHHHhcchhhccCCCCcEEEEEeeeecCCCCCCCCeEeecCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999643 5666
Q ss_pred CCC------CCCceEEeeeeeccC
Q psy2324 153 SNP------GPPDYQASAWKIGLI 170 (170)
Q Consensus 153 s~~------~~~~~~~te~gia~~ 170 (170)
.++ +.+||||||||||++
T Consensus 379 ~g~~v~t~~~~v~~iVTE~Gva~L 402 (448)
T 3gk7_A 379 HGAAVTTSRNDADYVVTEYGIAEM 402 (448)
T ss_dssp TTCCCSBCTTTCCEEEETTEEEEC
T ss_pred CCCCceeCcCceEEEEeceEEEEc
Confidence 543 499999999999974
No 4
>2oas_A ATOA, 4-hydroxybutyrate coenzyme A transferase; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; HET: COA; 2.40A {Shewanella oneidensis}
Probab=100.00 E-value=1.2e-53 Score=383.04 Aligned_cols=167 Identities=39% Similarity=0.644 Sum_probs=159.0
Q ss_pred chHHHHHhcccCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceeccHH
Q psy2324 2 IPEAILSNIKHQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSNDPA 81 (170)
Q Consensus 2 ipnAV~~~L~~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN~P~ 81 (170)
||+||+..|.++++|++|||||+|++++|+|+|++++..|++++|+++++|++|+++||||+|+||.++|+|++|+|||+
T Consensus 214 ip~av~~~l~~~~~l~i~te~~~d~~~~l~~~G~i~~~~k~~~~g~~~~~f~~Gs~~~y~~~~~n~~~~~~~~~~~n~~~ 293 (436)
T 2oas_A 214 IPDAVLSCLTGHKDLGVHTELFSDGILQLVEKGVINNTKKRFYPGKLVTGFALGSQKLYDYVDDNPAVIFMDIEQVNDTS 293 (436)
T ss_dssp HHHHHHHTCTTCCSBEEBCSEECHHHHHHHHTTSBCCTTCSSSTTSEEESEECSCHHHHHHHTTCTTEEECCHHHHTCHH
T ss_pred HHHHHHHHHhhcCceeEEeccccHhHHHHHHCCCcccccccccCCcceeeeccchHHHHHHHhcCCcEEeecccccCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCC------CCCCC---
Q psy2324 82 IIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNS------MPLLG--- 152 (170)
Q Consensus 82 ~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~------~~~l~--- 152 (170)
+|+++++++|||+|+|||++||||++++|++++||+|||.||++||++|+| |||||||+||+++ .|.+.
T Consensus 294 ~i~~~~~~~~i~~a~evD~~G~vn~~~~g~~~~~G~GG~~D~~~gA~~~~g--gk~ii~~~~t~k~G~iskiv~~~~~g~ 371 (436)
T 2oas_A 294 IIRKNPNVMAINSALQVDLTGQVCADSIGTKIYSGVGGQMDFIRGAGLSEG--GRSVIALPSTAAGGRISRIASVLSPGA 371 (436)
T ss_dssp HHTTSTTEEEEECCSEEETTCCEECSEETTEECSCCTTHHHHHHHHHHSTT--CEEEEECCSEETTTTEESEESSCCTTC
T ss_pred HHhCCCCcEEEeccceecCCCCeeeeecCCeeecccccHHHHhhhhhhcCC--CcEEEEEeeecCCCCCCEEeeccCCCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999873 35553
Q ss_pred ---CCCCCCceEEeeeeeccC
Q psy2324 153 ---SNPGPPDYQASAWKIGLI 170 (170)
Q Consensus 153 ---s~~~~~~~~~te~gia~~ 170 (170)
+.-+.+||||||||||++
T Consensus 372 ~v~t~~~~v~~vvTE~Gva~l 392 (436)
T 2oas_A 372 GVVTTRAHVHYIVTEYGAANL 392 (436)
T ss_dssp CEEECTTTCCEEEETTEEEEC
T ss_pred CcccCcccCCEEECCCEEEEC
Confidence 233499999999999974
No 5
>3d3u_A 4-hydroxybutyrate COA-transferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.80A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.2e-48 Score=347.00 Aligned_cols=167 Identities=37% Similarity=0.727 Sum_probs=144.4
Q ss_pred chHHHHHhcccCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceeccHH
Q psy2324 2 IPEAILSNIKHQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSNDPA 81 (170)
Q Consensus 2 ipnAV~~~L~~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN~P~ 81 (170)
+|+||+..|.+++||++||||++|++++|+|+|+++++.|.+++||.+++|++|+++||+|+++||.+.|+|.+++|||+
T Consensus 220 ip~av~~~l~~~~~l~i~te~~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~~~g~~~~y~~~~~~~~~~~~~~~~~n~p~ 299 (439)
T 3d3u_A 220 IPDAVLRALEGHKDLGIHTEMFTDGVMRMIRKGIINGKKKTLHPEKVVTSLIFGSKELYDFVNNNPVIECYPVDYINNPD 299 (439)
T ss_dssp HHHHHHHTTTTCCSBEEECSCBCHHHHHHHHHTCBCCSSCSSSTTSEEESBBCCCHHHHHHHTTCTTEEECBHHHHTCHH
T ss_pred HHHHHHHHHhhCCCceEEEEEecchhHhhccCCcccccccccCCCceeEEEccCchHHHHHhcCCCCEEEEeccccCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccC-C-----CCCCC---
Q psy2324 82 IIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDN-S-----MPLLG--- 152 (170)
Q Consensus 82 ~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~-~-----~~~l~--- 152 (170)
+|+|++++++||+|+|||++||||++++|+++++|+|||.||++||++|+| ||+||+++||++ + .|.+.
T Consensus 300 ~i~~~~~dv~i~ga~evD~~G~vn~~~~g~~~~~G~GG~~D~~~~A~~s~~--gk~ii~~~~t~k~G~~s~iv~~~~~g~ 377 (439)
T 3d3u_A 300 VIGKNDRMVSINSCLEMDLMGQAASESIGYEQFSGSGGQVDFLRGAKRSKG--GISIMAFPSTAKKGTESRIVPILKEGA 377 (439)
T ss_dssp HHHHSSSEEEEECCSCEETTSCC--------------CHHHHHHHHTTSTT--CEEEEECCSEETTTTEESEESSCC---
T ss_pred HhhccCCcEEEehheEecCCCCEeeeccCCeeecccccHHHHhhcccccCC--CeEEEEEeeecCCCCCCeEeECccCCC
Confidence 999999999999999999999999999999999999999999999999999 999999999975 3 34442
Q ss_pred ---CCCCCCceEEeeeeeccC
Q psy2324 153 ---SNPGPPDYQASAWKIGLI 170 (170)
Q Consensus 153 ---s~~~~~~~~~te~gia~~ 170 (170)
+.-+.+|+|||||||++.
T Consensus 378 ~v~~~~~~v~~vVTE~gva~l 398 (439)
T 3d3u_A 378 CVTTGRNEVDYVVTEYGVARL 398 (439)
T ss_dssp ---CCSTTCSEEEETTEEEEC
T ss_pred CceeCCCcceEEECCCEEEEe
Confidence 333599999999999863
No 6
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=100.00 E-value=4e-44 Score=326.40 Aligned_cols=153 Identities=22% Similarity=0.394 Sum_probs=140.2
Q ss_pred chHHHHHhcccC--CCceEEecccchHHHHHHHcCCccccccccCCCceEEEeec---CchHHHHhccc-CCceeeeccc
Q psy2324 2 IPEAILSNIKHQ--INLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLL---GDKPLYDFVHN-NELVQMKRGT 75 (170)
Q Consensus 2 ipnAV~~~L~~~--kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~---Gs~~LY~~~d~-np~v~~~p~~ 75 (170)
|||||+..|.++ ++|++|||||+|++++|+|+|++++. .+++|++ |+++||+|+++ ||.|+|+|++
T Consensus 267 ip~aV~~~l~~~~~~~l~~~se~~~d~~~~li~aG~~~~~--------~~~~f~~~~~g~~~~~~~~~~~~~~i~~~~~~ 338 (497)
T 2g39_A 267 IANAVMCGLIESPFENLTMYSEVLQDSTFDLIDAGKLRFA--------SGSSITLSPRRNADVFGNLERYKDKLVLRPQE 338 (497)
T ss_dssp HHHHHHHGGGSSSCCSEEEECSEECHHHHHHHHTTCEEEE--------EESEECCCHHHHHHHHHSGGGTGGGEEECBHH
T ss_pred HHHHHHHHhhhcccccceEEeeccchhHHHHHHCCCCcce--------eeeeeccccccHHHHHHhHHhcCCceeeeccc
Confidence 899999999988 99999999999999999999999986 4888998 57999999999 7999999999
Q ss_pred eeccHHHHHhcCCceEeccceEeeecccccccCC-CCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCC------C
Q psy2324 76 YSNDPAIIRQNHRMTAINTCLEIDITGQVVSDSL-GTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNS------M 148 (170)
Q Consensus 76 ~tN~P~~Iar~~~~vsINsaleVDL~GQvnse~i-G~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~------~ 148 (170)
|+|||++|+++ +++|||+|+|||++||||++++ |++++||+|||.||+|||++| |||+|||+++ .
T Consensus 339 ~~N~p~~i~~~-~~iain~a~evD~~G~vn~~~~~g~~~~~G~GG~~Df~~gA~~s-------ii~~~st~k~G~iskIv 410 (497)
T 2g39_A 339 ISNHPEVVRRL-GIIGINTALEFDIYGNVNSTHVGGTKMMNGIGGSGDFARNAHLA-------IFVTKSIAKGGNISSVV 410 (497)
T ss_dssp HHTCHHHHHHH-TCEEEEECSEEETTSCEESSEETTTEECSCCTTHHHHHHHCSEE-------EEECCSEEGGGTEESEE
T ss_pred ccCCHHHHhCC-CcEEEehhheccCCCceeeeeccCCcEEeccCcchhhhccCCEE-------EEEEccccCCCCcCeEe
Confidence 99999999999 7999999999999999999995 999999999999999999865 9999999763 3
Q ss_pred CCCC---CCCCCCceEEeeeeeccC
Q psy2324 149 PLLG---SNPGPPDYQASAWKIGLI 170 (170)
Q Consensus 149 ~~l~---s~~~~~~~~~te~gia~~ 170 (170)
|.++ ++-+.+||||||||||++
T Consensus 411 ~~~~~v~t~~~~v~~vVTE~gva~l 435 (497)
T 2g39_A 411 PMVSHVDHTEHDVDILVTEQGLADL 435 (497)
T ss_dssp SSCSSCSBCGGGCCEEEETTEEEEC
T ss_pred eCCCCeecCCCceeEEECCCEEEEc
Confidence 4443 344699999999999974
No 7
>4eu9_A Succinyl-COA:acetate coenzyme A transferase; HET: COA; 1.48A {Acetobacter aceti} PDB: 4eua_A* 4eu3_A* 4eu4_A* 4eu5_A* 4eu6_A* 4eu7_A* 4eu8_A* 4eub_A* 4euc_A* 4eud_A*
Probab=100.00 E-value=2.6e-44 Score=327.62 Aligned_cols=156 Identities=21% Similarity=0.294 Sum_probs=134.0
Q ss_pred chHHHHHhccc--CCCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCC-ceeeeccceec
Q psy2324 2 IPEAILSNIKH--QINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNE-LVQMKRGTYSN 78 (170)
Q Consensus 2 ipnAV~~~L~~--~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np-~v~~~p~~~tN 78 (170)
|||||+..|++ +|||++|||||+|++++|+|+|++++++|+ .++.++.|+++||+|+|.|+ ...++|.+++|
T Consensus 273 ip~AV~~~L~~~~~~~l~~~te~~~d~~~~L~e~G~i~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~n 347 (514)
T 4eu9_A 273 VANAVLEGLKEGPFENLVGYSEVIQDGMLAMLDSGRMRIASAS-----SFSLSPEAAEEINNRMDFFRSKIILRQQDVSN 347 (514)
T ss_dssp HHHHHHHHHHHSSCCSEEEESSEECHHHHHHHHHTSEEEEEES-----EECCCHHHHHHHHHTHHHHHTTEEEEBHHHHT
T ss_pred hHHHHHHHHhhcCCcCceEeecCcchhhHhHHhCCceeccccc-----eEEecHHHHHHHHhhHHhCcCcccccchhccC
Confidence 89999999976 599999999999999999999999998864 35667778999999999864 45677888888
Q ss_pred cHHHHHhcCCceEeccceEeeecccccccCC-CCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCCC------CCC
Q psy2324 79 DPAIIRQNHRMTAINTCLEIDITGQVVSDSL-GTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNSM------PLL 151 (170)
Q Consensus 79 ~P~~Iar~~~~vsINsaleVDL~GQvnse~i-G~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~~------~~l 151 (170)
+|.++++. +++|||+|+||||+|||||+++ |+|++||+|||.||+|||++| |||+|||+++. |.+
T Consensus 348 ~~~i~~~~-~~iain~a~EvDl~GqVns~~~~g~~~~sG~GG~~Df~~gA~~s-------i~~~~st~k~g~is~ivp~~ 419 (514)
T 4eu9_A 348 SPGIIRRL-GCIAMNGMIEADIYGNVNSTRVMGSKMMNGIGGSGDFARSSYLS-------IFLSPSTAKGGKISAIVPMA 419 (514)
T ss_dssp CHHHHHHH-TCEEEECCSEEETTCCEESSEETTTEECSCCTTHHHHHHHSSEE-------EEECCSEETTTTEESEESSC
T ss_pred cHHHhccC-CeEEEecceEecccCceeeeeccCcceecCccchHHHhhccCcE-------EEEEeeecCCCcccccccCC
Confidence 88877655 9999999999999999999996 999999999999999999754 99999999852 222
Q ss_pred C---CCCCCCceEEeeeeeccC
Q psy2324 152 G---SNPGPPDYQASAWKIGLI 170 (170)
Q Consensus 152 ~---s~~~~~~~~~te~gia~~ 170 (170)
. +.-..+||||||||||+.
T Consensus 420 ~~v~~~~~~v~~vVTE~Gva~L 441 (514)
T 4eu9_A 420 AHVDHIMQDAQIFVTEQGLADL 441 (514)
T ss_dssp SSCSBCGGGCCEEEETTEEEEC
T ss_pred CCccCCCCcCCEEEcCCEEEEe
Confidence 2 222389999999999974
No 8
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=100.00 E-value=7.1e-43 Score=318.77 Aligned_cols=153 Identities=25% Similarity=0.425 Sum_probs=139.4
Q ss_pred chHHHHHhcccCC---CceEEecccchHHHHHHHcCCccccccccCCCceEEEeec---CchHHHHhccc-CCceeeecc
Q psy2324 2 IPEAILSNIKHQI---NLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLL---GDKPLYDFVHN-NELVQMKRG 74 (170)
Q Consensus 2 ipnAV~~~L~~~k---dLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~---Gs~~LY~~~d~-np~v~~~p~ 74 (170)
|||||+..|.+++ +|++||||++|++++|+|+|++++. ++++|++ |+++||||+++ ||.|+|+|+
T Consensus 262 ip~aV~~~l~~~~~~~~l~i~te~~~d~~~~lieaG~i~~~--------~~~~f~~~~~g~~~~~~~~~~~~~~i~~~~~ 333 (506)
T 2nvv_A 262 VANAVLGALGDNPDIPAFNMYTEVIQDAVIALMKKGRIKFA--------SGCSLSVSRSVIQDIYANLDFFKDKILLRPQ 333 (506)
T ss_dssp HHHHHHHHHHHCTTSCCEEEECSEECHHHHHHHHTTSEEEE--------EESEECCCHHHHHHHHTCHHHHTTTEEECBH
T ss_pred HHHHHHHHhhhcCCcccceEEecccccchHHHHHCCCCCCe--------eeeEeecccccHHHHHhhHHhcCCceeeecc
Confidence 8999999998775 9999999999999999999999986 4888988 58999999999 799999999
Q ss_pred ceeccHHHHHhcCCceEeccceEeeecccccccCC-CCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCC------
Q psy2324 75 TYSNDPAIIRQNHRMTAINTCLEIDITGQVVSDSL-GTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNS------ 147 (170)
Q Consensus 75 ~~tN~P~~Iar~~~~vsINsaleVDL~GQvnse~i-G~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~------ 147 (170)
+|+|+|++|+++ +++|||+|+|||++||||++++ |++++||+|||.||+|||++| |+|+|||+++
T Consensus 334 ~~~N~p~~i~~~-~~iain~alevD~~G~vn~~~~~g~~~~~G~GG~~Df~~gA~~s-------i~~~~st~k~G~is~i 405 (506)
T 2nvv_A 334 EYSNNPEIVRRL-GVITINTALEADIFGNINSTHVSGTRMMNGIGGSGDFTRNSYVS-------IFTTPSVMKDGKISSF 405 (506)
T ss_dssp HHHTCHHHHHHH-TCEEEEECSEEETTSCEECSEETTTEECSCCTTHHHHHHHSSSE-------EEECCSEEGGGTEESE
T ss_pred cccCCHHHHhCC-CcEEEehhheecCCCceeeeeccCCceEcccCcHHHHhhccCeE-------EEEeccccCCCCCCeE
Confidence 999999999999 7999999999999999999995 999999999999999999855 9999999763
Q ss_pred CCCCC---CCCCCCceEEeeeeeccC
Q psy2324 148 MPLLG---SNPGPPDYQASAWKIGLI 170 (170)
Q Consensus 148 ~~~l~---s~~~~~~~~~te~gia~~ 170 (170)
.|.+. +.-+.+|+||||||||++
T Consensus 406 V~~~~~v~~~~~~v~~vVTE~Gva~L 431 (506)
T 2nvv_A 406 VPMVAHHDHSEHSVKVIISEWGVADL 431 (506)
T ss_dssp ESSCSSCSBCTTTCCEEEETTEEEEC
T ss_pred EeCCCCcccCCCceeEEECCCEEEEc
Confidence 34333 445699999999999974
No 9
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=100.00 E-value=2.9e-37 Score=282.00 Aligned_cols=149 Identities=15% Similarity=0.169 Sum_probs=135.7
Q ss_pred chHHHHHhcccC-CCceEEecc----cchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCc-eeeeccc
Q psy2324 2 IPEAILSNIKHQ-INLGVHTEL----LTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNEL-VQMKRGT 75 (170)
Q Consensus 2 ipnAV~~~L~~~-kdLgvhTEm----~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~-v~~~p~~ 75 (170)
||+||+..|.++ ++|++|||+ ++|++++|+|+|++++..+ +++|++|++ +|+++||. |+|+|++
T Consensus 280 ip~aV~~~l~~~~~~l~i~se~g~~g~~d~~~~l~e~G~i~~~~~-------~~~f~~g~~---~~~~~n~~~~~~~~~~ 349 (509)
T 1xr4_A 280 ASLAVTRFLEDKMRRHNITASFGLGGITGTMVDLHEKGLIKALLD-------TQSFDGDAA---RSLAQNPHHIEISTNQ 349 (509)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEECHHHHHHHHTTSBSCEEE-------EEECSHHHH---HHHHHCTTEEECCHHH
T ss_pred HHHHHHHHhhhhcccceeecccccCCcCCccHhHHhCCCccCCcc-------eeEeeccHH---HHHHhCCcceEEeccc
Confidence 899999999998 999999999 9999999999999998643 899999999 58999997 9999999
Q ss_pred eeccH---HHHHhcCCceEeccceEeeecccccccC-CCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCCCCCC
Q psy2324 76 YSNDP---AIIRQNHRMTAINTCLEIDITGQVVSDS-LGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNSMPLL 151 (170)
Q Consensus 76 ~tN~P---~~Iar~~~~vsINsaleVDL~GQvnse~-iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~~~~l 151 (170)
|+|+| ++++++| ++||+|+|||++||||+++ +|+++++|+|||.||++||++| ||+++||+++.|.+
T Consensus 350 ~~n~~~~~~~~~~ld--iai~galevD~~G~vn~~~~~~g~~~~G~GG~~D~~~gA~~s-------ii~~~~t~~~~skI 420 (509)
T 1xr4_A 350 YANPASKGAACERLN--VVMLSALEIDVNFNVNVMTGSNGVLRGASGGHSDTAAGADLT-------IITAPLVRGRIPCV 420 (509)
T ss_dssp HTCTTCSCCGGGGCS--EEEECCSEECTTCCEECSBCTTSCBCSBCTTHHHHHHHSSEE-------EEECCSEETTEESB
T ss_pred cccCcchhhhhcCCC--eEEeeeEEEccCCceeeeeccCCeEecccccHHHHhhccCeE-------EEEEcccCCCCCeE
Confidence 99999 9999997 9999999999999999999 7999999999999999999864 99999998753333
Q ss_pred C-------CCCCCCceEEeeeeecc
Q psy2324 152 G-------SNPGPPDYQASAWKIGL 169 (170)
Q Consensus 152 ~-------s~~~~~~~~~te~gia~ 169 (170)
. +.-+.+||||||||||+
T Consensus 421 V~~~~~v~t~~~~V~~iVTE~Gva~ 445 (509)
T 1xr4_A 421 VEKVLTTVTPGASVDVLVTDHGIAV 445 (509)
T ss_dssp CSSCSSCSBCGGGCCEEEETTEEEE
T ss_pred eeCCCCcccCcCeeCEEECCcEEEE
Confidence 2 23349999999999997
No 10
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=100.00 E-value=2.3e-36 Score=276.74 Aligned_cols=149 Identities=15% Similarity=0.145 Sum_probs=135.1
Q ss_pred chHHHHHhcccC-CCceEEecc----cchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCC--ceeeecc
Q psy2324 2 IPEAILSNIKHQ-INLGVHTEL----LTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNE--LVQMKRG 74 (170)
Q Consensus 2 ipnAV~~~L~~~-kdLgvhTEm----~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np--~v~~~p~ 74 (170)
+|+||+..|.++ ++|++|||+ ++|++++|+|+|++++.. .+++|++|+ |+|+++|| .++++|+
T Consensus 283 ip~aV~~~L~~~~~~l~i~se~g~~g~~~~~~~lieaG~i~~~~-------~~~~f~~G~---~~~~~~n~~~~~~~~~~ 352 (519)
T 2hj0_A 283 ASLAVTRFMREQMIKDDIKANFALGGITNAMVELLEEGLVDKIL-------DVQDFDHPS---AVSLDRNAEKHYEIDAN 352 (519)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECSEECHHHHHHHHTTSEEEEE-------ESEESSHHH---HHHHHHTTTTEEECCHH
T ss_pred HHHHHHHHHhhhcccceeeeceeccCcChhHHHHHHCCCCCCCc-------cccccccch---HHHHHhCcHhhEEEchH
Confidence 899999999999 999999998 999999999999999642 378999999 99999999 9999999
Q ss_pred ce---eccHHHHHhcCCceEeccceEeeecccccccC-CCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccC----
Q psy2324 75 TY---SNDPAIIRQNHRMTAINTCLEIDITGQVVSDS-LGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDN---- 146 (170)
Q Consensus 75 ~~---tN~P~~Iar~~~~vsINsaleVDL~GQvnse~-iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~---- 146 (170)
+| +|+|++|+++| ++||+|+|||++||||+++ +|+++++|+|||.||++||++ +|++||||..
T Consensus 353 ~~~n~~n~p~~i~~ld--v~ilga~eVD~~Gnvn~~~~~gg~~~~G~GG~~D~~~gA~~-------~ii~~~~t~g~~sk 423 (519)
T 2hj0_A 353 MYASPLSKGSVINQLD--ICVLSALEVDTNFNVNVMTGSDGVIRGASGGHCDTAFAAKM-------SLVISPLVRGRIPT 423 (519)
T ss_dssp HHHCSSSSCCGGGGCS--EEEECCSEECTTCCEECSBCTTCCBCCBCTTHHHHHHHSSE-------EEEECCSEETTEES
T ss_pred HhhccCCCHHHhccCC--eeeeeeEEEccCCceeeeeccCCeEecccccHHHHhhccCe-------EEEEEcccCCCCCe
Confidence 99 89999999998 9999999999999999999 899999999999999999985 5999999963
Q ss_pred CCCCCC---CCCCCCceEEeeeeecc
Q psy2324 147 SMPLLG---SNPGPPDYQASAWKIGL 169 (170)
Q Consensus 147 ~~~~l~---s~~~~~~~~~te~gia~ 169 (170)
..|.+. +.-+.+||||||||||+
T Consensus 424 iV~~~~~vtt~~~~V~~VVTE~Gva~ 449 (519)
T 2hj0_A 424 FVDKVNTVITPGTSVDVVVTEVGIAI 449 (519)
T ss_dssp BCSSCSSCSBCGGGCCEEECSSCEEE
T ss_pred eccCCCCcccCCCCCCEEECCCEEEE
Confidence 244443 33349999999999997
No 11
>3k6m_A Succinyl-COA:3-ketoacid-coenzyme A transferase 1, mitochondrial; SCOT, COA transferase, dynamic domain, glycerol, mitochondri transferase; 1.50A {Sus scrofa} PDB: 1m3e_A* 1o9l_A 1ooy_A 2nrc_A 2nrb_A 3oxo_A* 1ooz_A 1ope_A 3dlx_A
Probab=99.85 E-value=5.6e-23 Score=186.99 Aligned_cols=141 Identities=13% Similarity=0.155 Sum_probs=112.3
Q ss_pred CchHHHHHhcccCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEee-----cCchHHHHhcccCCceeeeccc
Q psy2324 1 KIPEAILSNIKHQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLL-----LGDKPLYDFVHNNELVQMKRGT 75 (170)
Q Consensus 1 ~ipnAV~~~L~~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa-----~Gs~~LY~~~d~np~v~~~p~~ 75 (170)
+||++|...|.++++|++|||.-..++..+-..|.++. +.++.||.+.++. +++.+.|+|++..
T Consensus 285 GiP~~v~~~~~~~~~l~l~~E~G~~g~~p~~~~~~~d~--~~in~Gk~~~t~~~g~~~~~~~~~F~~~~gG--------- 353 (481)
T 3k6m_A 285 GIPLLASNFISPNMTVHLQSENGILGLGPYPLQNEVDA--DLINAGKETVTVLPGASYFSSDESFAMIRGG--------- 353 (481)
T ss_dssp THHHHHGGGCCTTSCEEEEETTTEEEECCCCCGGGCCT--TCBCTTSBBCCEEEEEEECCHHHHHHHHHTT---------
T ss_pred CHHHHHHhhhccCCcEEEEECCcEeCCccCCCCCccCc--ccccCCCceEeccccceecCCHHHeeeecCC---------
Confidence 58999999999999999999966666655555554432 3466787655444 5599999998873
Q ss_pred eeccHHHHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCC-----CCC
Q psy2324 76 YSNDPAIIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNS-----MPL 150 (170)
Q Consensus 76 ~tN~P~~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~-----~~~ 150 (170)
++| ++||+|+|||++||||++++++++++|+||+.||++||+ +|+|++|+||+++ .|.
T Consensus 354 ---------~~D--v~ilga~qVD~~Gnvn~~~~pg~~~~G~GG~~D~~~ga~------~k~ii~~~~t~k~g~~~Iv~~ 416 (481)
T 3k6m_A 354 ---------HVN--LTMLGAMQVSKYGDLANWMIPGKLVKGMGGAMDLVSSAK------TKVVVTMEHSAKGNAHKIMEK 416 (481)
T ss_dssp ---------CCS--EEEECCSEEETTCCEECSCBTTTBCSCCTTHHHHTCCTT------SEEEEECCSBCGGGCBSEESS
T ss_pred ---------CeE--EEEechHhccCCCCccccccCCceeecCCcchhhhccCC------ceEEEEEeeEcCCCceEEecc
Confidence 222 999999999999999999999999999999999999986 7889999999873 233
Q ss_pred CC---CCCCCCceEEeeeeecc
Q psy2324 151 LG---SNPGPPDYQASAWKIGL 169 (170)
Q Consensus 151 l~---s~~~~~~~~~te~gia~ 169 (170)
++ ++.+.+|+|||||||++
T Consensus 417 ~~~~~t~~~~v~~vVTE~gV~~ 438 (481)
T 3k6m_A 417 CTLPLTGKQCVNRIITEKAVFD 438 (481)
T ss_dssp CSSCCSBSSCCCEEECSSEEEE
T ss_pred cccCCCCCCcceEEEcCcEEEE
Confidence 22 33458899999999976
No 12
>2ahu_A Putative enzyme YDIF; COA transferase, glutamyl thioester, structural genomi montreal-kingston bacterial structural genomics initiative; 1.90A {Escherichia coli} SCOP: c.124.1.3 c.124.1.2 PDB: 2ahv_A* 2ahw_A*
Probab=99.82 E-value=3.6e-22 Score=183.01 Aligned_cols=132 Identities=14% Similarity=0.077 Sum_probs=101.7
Q ss_pred CchHHHHHhccc-C--CCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeecccee
Q psy2324 1 KIPEAILSNIKH-Q--INLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYS 77 (170)
Q Consensus 1 ~ipnAV~~~L~~-~--kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~t 77 (170)
+||+||+..|.+ . ++|++|||+ |.+....+ .|.. .+++.++ |+|++.|+.+.+++..++
T Consensus 310 GiP~av~~~l~~~~~~~~l~~~~E~-----------G~~g~~~~---~g~~-~g~~~~~---~~~~~~~~~f~~~~~g~v 371 (531)
T 2ahu_A 310 GIADGIGLVAREEGCADDFILTVET-----------GPIGGITS---QGIA-FGANVNT---RAILDMTSQFDFYHGGGL 371 (531)
T ss_dssp STTTTHHHHHHHHTCGGGSEEBCTT-----------SEESCBCC---------CCCBSC---SEECCHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHHhcCCCCCeEEEEcc-----------ceecCccC---CCcc-ceeEECH---HHhcchhhhhheecCCCe
Confidence 489999999987 3 599999996 44433221 1222 2345554 899999999988887666
Q ss_pred ccHHHHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCC----------
Q psy2324 78 NDPAIIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNS---------- 147 (170)
Q Consensus 78 N~P~~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~---------- 147 (170)
+ +|||+|+|||++||||++++|.+ ++|+|||.||++|| +|+|++++||+++
T Consensus 372 d-----------vailga~eVD~~Gnvn~~~~G~~-~~G~GG~~D~~~gA-------~~~i~~~~~t~~g~~~~~~~g~l 432 (531)
T 2ahu_A 372 D-----------VCYLSFAEVDQHGNVGVHKFNGK-IMGTGGFIDISATS-------KKIIFCGTLTAGSLKTEIADGKL 432 (531)
T ss_dssp S-----------EEEEECSEEETTSCEECSEETTE-ECBCTTHHHHHTTC-------SEEEEECCSEESSCEEEECSSCE
T ss_pred E-----------EEEeChHHhCCCCcchhhccCCc-eecCCcchhhhcCC-------CeEEEEeccccCCceeeecCCeE
Confidence 5 99999999999999999999876 89999999999998 4679999999873
Q ss_pred -----------CCCCC----CCC-----CCCceEEeeeeecc
Q psy2324 148 -----------MPLLG----SNP-----GPPDYQASAWKIGL 169 (170)
Q Consensus 148 -----------~~~l~----s~~-----~~~~~~~te~gia~ 169 (170)
.|.+. ++. +.+++||||+||++
T Consensus 433 ~i~~eg~~~kiV~~v~~v~~~G~~~~~~~~v~~vVTE~gV~~ 474 (531)
T 2ahu_A 433 NIVQEGRVKKFIRELPEITFSGKIALERGLDVRYITERAVFT 474 (531)
T ss_dssp EEEECCSEESEESCCSSCSBCHHHHHHTTCEEEEECSSEEEE
T ss_pred EEeccCCCceECCCCccCCCCCcccccCCCcEEEECCCEEEE
Confidence 22222 232 68899999999986
No 13
>1poi_B Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.3
Probab=99.82 E-value=3.9e-21 Score=162.72 Aligned_cols=135 Identities=20% Similarity=0.190 Sum_probs=108.7
Q ss_pred CchHHHHHhccc--CCCceEEecccchHHHHHHHcCCccccccc-----cCCCceE-EEeecCchHHHHhcccCCceeee
Q psy2324 1 KIPEAILSNIKH--QINLGVHTELLTPGVIKLFNSGVINNSKKS-----IDRGQIT-ATLLLGDKPLYDFVHNNELVQMK 72 (170)
Q Consensus 1 ~ipnAV~~~L~~--~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~-----~~~g~~v-~~fa~Gs~~LY~~~d~np~v~~~ 72 (170)
+||++++..|++ +++|++||| +|++++..|. .+++.+. +.+.+|++++|+|+.+
T Consensus 30 GiP~~va~~~~~~~~~~l~l~~E-----------~G~lg~~p~~~~~~~~d~~~~~~a~~~~~~~~~fd~~~~------- 91 (260)
T 1poi_B 30 GLPLIGASVAKRVYAPDCHIIVE-----------SGLMDCSPVEVPRSVGDLRFMAHCGCIWPNVRFVGFEIN------- 91 (260)
T ss_dssp SHHHHHHHHHHHTTCTTCEEEET-----------TTEEEECCSSCCSSTTCHHHHTSEEEECCHHHHHHHHHH-------
T ss_pred CHHHHHHHHHHHhcCCCEEEEEe-----------CceecCcccCcccCccCCCcEeehhhhcCHHHHhcccch-------
Confidence 489999999987 899999996 6999988764 3445554 4489999999999844
Q ss_pred ccceeccHHHHHhcCCceEeccceEeeecccccccCCCC-----eeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccC-
Q psy2324 73 RGTYSNDPAIIRQNHRMTAINTCLEIDITGQVVSDSLGT-----RIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDN- 146 (170)
Q Consensus 73 p~~~tN~P~~Iar~~~~vsINsaleVDL~GQvnse~iG~-----r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~- 146 (170)
..+.+.+..++||+|+|||++||+|++.+|. ++++|+||+.||++||. ++|++ +++.+
T Consensus 92 --------~~~~~g~~Dv~ilGa~qVD~~Gnvn~s~iG~~~~p~~~~~G~GGa~D~~~~A~-------~~iv~-~h~~rk 155 (260)
T 1poi_B 92 --------EYLHKANRLIAFIGGAQIDPYGNVNSTSIGDYHHPKTRFTGSGGANGIATYSN-------TIIMM-QHEKRR 155 (260)
T ss_dssp --------HHHHTCCCEEEEECCSEECTTCCEECSEEECSSSEEEECCCCTTHHHHHHHSC-------EEEEC-CCCTTT
T ss_pred --------hhhhcCCccEEEeChHHhCCCCCccccccCCcCCCceEeecccchHHHHhCCC-------EEEEE-ECCCCe
Confidence 2556677789999999999999999999987 89999999999999994 66999 77654
Q ss_pred CCCCCC----CC----------C----C-CCceEEeeeeecc
Q psy2324 147 SMPLLG----SN----------P----G-PPDYQASAWKIGL 169 (170)
Q Consensus 147 ~~~~l~----s~----------~----~-~~~~~~te~gia~ 169 (170)
-.|.+. ++ . + -+|+||||+||++
T Consensus 156 ~V~~v~~vt~~G~~~~~~~r~~~~~t~~r~~~~vVTe~gV~~ 197 (260)
T 1poi_B 156 FMNKIDYVTSPGWIDGPGGRERLGLPGDVGPQLVVTDKGILK 197 (260)
T ss_dssp BCSSCSCCSBCCSTTSTTHHHHTTCCTTCCEEEEEETTEEEE
T ss_pred ecccCceeeccCcccccccccccccccCCCCCEEEeCceEEE
Confidence 344444 22 1 1 4599999999985
No 14
>3rrl_B Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori} PDB: 3cdk_B
Probab=99.78 E-value=1e-20 Score=155.71 Aligned_cols=139 Identities=17% Similarity=0.246 Sum_probs=96.6
Q ss_pred CchHHHHHhcccCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEe-----ecCchHHHHhcccCCceeeeccc
Q psy2324 1 KIPEAILSNIKHQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATL-----LLGDKPLYDFVHNNELVQMKRGT 75 (170)
Q Consensus 1 ~ipnAV~~~L~~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~f-----a~Gs~~LY~~~d~np~v~~~p~~ 75 (170)
+||++|...|. .+++.+|||--.-++..+-..|..+ .+-++.|+...++ .+.+.+.|+|++.
T Consensus 24 GiP~~va~~~~-~~~v~l~~E~G~~g~~p~p~~~~~d--~~~in~G~~~~t~~~~~~~~~~~~~F~~~~g---------- 90 (207)
T 3rrl_B 24 GLPTLVANEVS-GMNIVFQSENGLLGIGAYPLEGSVD--ADLINAGKETITVVPGASFFNSADSFAMIRG---------- 90 (207)
T ss_dssp TGGGGGGGGGS-SSCCEEEETTTEEEECCCCCTTCCC--TTCBCTTSBBCCEEEEEEECCHHHHHHHHHT----------
T ss_pred ChHHHHHHhcc-CCcEEEEeccceecCcCCCCccccC--HhHeecCCceeeecCCceeeCCHHHHHHHhC----------
Confidence 58999999999 8899999995433322222222211 1223444442222 2334444443332
Q ss_pred eeccHHHHHhcCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCC-C----CC
Q psy2324 76 YSNDPAIIRQNHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNS-M----PL 150 (170)
Q Consensus 76 ~tN~P~~Iar~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~-~----~~ 150 (170)
-.--++||+|+|||++||+|++++++++++|+||+.||++|| +|+|++++||+++ + |.
T Consensus 91 ----------G~~Dvailga~qVD~~Gnvn~~~~~~~~~~G~GGa~d~~~~A-------~~vi~~~~~t~k~G~~kiv~~ 153 (207)
T 3rrl_B 91 ----------GHIDLAILGGMEVSQNGDLANWMIPKKLIKGMGGAMDLVHGA-------KKVIVIMEHCNKYGESKVKKE 153 (207)
T ss_dssp ----------TCCSEEEECCSEEETTSCEECSEETTTEECCCTTHHHHHHHS-------SEEEEECCSBCTTSCBSEESS
T ss_pred ----------CCeeEEEECHHHHCcCCCccccccCCeeecCcccHHHHHhCC-------CEEEEEEeeecCCCcceECcc
Confidence 211389999999999999999999999999999999999998 5789999999873 2 33
Q ss_pred CC---CCCCCCceEEeeeeecc
Q psy2324 151 LG---SNPGPPDYQASAWKIGL 169 (170)
Q Consensus 151 l~---s~~~~~~~~~te~gia~ 169 (170)
+. ++.+.+|+|||||||.+
T Consensus 154 ~~~~~t~~~~v~~vVTe~gV~~ 175 (207)
T 3rrl_B 154 CSLPLTGKGVVHQLITDLAVFE 175 (207)
T ss_dssp CSSCCSBSSCCSEEECSSEEEE
T ss_pred ccccCCCCCceEEEECCceEEE
Confidence 22 34457899999999975
No 15
>2hj0_A Putative citrate lyase, ALFA subunit; alpha beta protein., structural genomics, PSI-2, protein STR initiative; HET: CIT; 2.70A {Streptococcus mutans}
Probab=79.98 E-value=9.6 Score=34.64 Aligned_cols=135 Identities=13% Similarity=0.080 Sum_probs=81.3
Q ss_pred HHHHhccc--CCCceEEecccc---hHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceec-
Q psy2324 5 AILSNIKH--QINLGVHTELLT---PGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSN- 78 (170)
Q Consensus 5 AV~~~L~~--~kdLgvhTEm~~---D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN- 78 (170)
+++.+|.+ .|||.+++.-.. |++.+|++.|.+.. +.++.+|. .+-+.+.++. .+.|+-|..
T Consensus 82 ~Li~AL~~r~~kdLtli~~s~g~~~~~l~~~~~~g~v~r----------~~~~~~g~-~~r~~i~~G~--~~~P~~l~~~ 148 (519)
T 2hj0_A 82 MVLDEIAKMGIKDISIAPSSIANVHEPLIDHIKNGVVTN----------ITSSGLRD-KVGAAISEGI--MENPVIIRSH 148 (519)
T ss_dssp HHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEE----------EEESBCHH-HHHHHHHTTC--CSSCEEECCH
T ss_pred HHHHHHHhcCCCCeEEEeecCCCcchhHHhHhhcCcEEE----------EEecCCCc-HHHHHHHCCC--CCCCceeecc
Confidence 88888864 489999885333 37888999988753 22333432 3445555554 677888876
Q ss_pred --cHHHHHh--cCCceEeccceEeeecccccccCCCCeeeec-cCchHHHHHHHhhCCCCCCcEEEEeeeccCCCCCCCC
Q psy2324 79 --DPAIIRQ--NHRMTAINTCLEIDITGQVVSDSLGTRIYSG-FGGQVDFMRGALTGLDGKGLKYQILVHEDNSMPLLGS 153 (170)
Q Consensus 79 --~P~~Iar--~~~~vsINsaleVDL~GQvnse~iG~r~~sG-~GGq~DF~rgA~~S~gg~G~sIial~St~~~~~~l~s 153 (170)
-|+.+.+ ++-=+|+=.+-..|=.|+++-+. +. .-++.||..-+..+ ++-+|+---..-..+.-+.
T Consensus 149 gG~~~ll~~~~l~~DVAlI~as~aD~~Gnls~~~------g~s~~~s~~~~~~~a~~----A~~VIaEVn~~vP~~~~p~ 218 (519)
T 2hj0_A 149 GGRARAIATDDIHIDVAFLGAPSSDAYGNANGTR------GKTTCGSLGYAMIDAKY----ADQVVIVTDTLVPYPNTPI 218 (519)
T ss_dssp HHHHHHHHHTSSCCSEEEEEESEECTTSCEESSS------SSSCCSCCHHHHHHHHH----CSEEEEEESSBCCSSCSSC
T ss_pred CCHHHHHhcCCCCCcEEEEEecccCCCCcEEEec------CccccccchhhHHHHhh----CCEEEEEeCCCCCCCCCCc
Confidence 7888864 43227777777788888766310 00 01567899888876 5556655322222222122
Q ss_pred CCC--CCceEE
Q psy2324 154 NPG--PPDYQA 162 (170)
Q Consensus 154 ~~~--~~~~~~ 162 (170)
-++ .+|+||
T Consensus 219 ~I~~~~VD~IV 229 (519)
T 2hj0_A 219 SIPQTDVDYIV 229 (519)
T ss_dssp SBCGGGCSEEE
T ss_pred eeCeEeeEEEE
Confidence 233 678777
No 16
>1xr4_A Putative citrate lyase alpha chain/citrate-ACP TR; the midwest center for structural genomics, MCSG, structural genomics; 2.37A {Salmonella typhimurium} SCOP: c.124.1.2 c.124.1.2
Probab=76.70 E-value=5.9 Score=35.92 Aligned_cols=136 Identities=11% Similarity=0.007 Sum_probs=78.3
Q ss_pred chHHHHHhccc------CCCceEEecccc---hHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeee
Q psy2324 2 IPEAILSNIKH------QINLGVHTELLT---PGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMK 72 (170)
Q Consensus 2 ipnAV~~~L~~------~kdLgvhTEm~~---D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~ 72 (170)
.|+++..+|.+ .|||.+++--+. +++.++++.|.+.. +.++.+| ..+-+.+.++. ..+
T Consensus 72 ~P~~Li~AL~~r~~~~g~kdLtli~~s~g~~~~~l~~~i~~g~v~r----------~~~~~~g-~~~r~~i~~G~-~~~- 138 (509)
T 1xr4_A 72 GGDKVVNMVMAKLAEMGFRDLTLASSSLIDAHWPLIEHIKNGVVRQ----------IYTSGLR-GKLGEEISAGL-MEN- 138 (509)
T ss_dssp GGCCHHHHHHHHHHHTTCCSEEEEESCCCGGGTTHHHHHHTTSEEE----------EEESBCC-HHHHHHHHHTC-CSS-
T ss_pred CHHHHHHHHHHHHHhcCCcceEEEecCCcCcchhHHHHhhcCceEE----------EEEccCC-HHHHHHHHcCC-CcC-
Confidence 45556555543 589999874333 47888999998743 3345555 34666665544 334
Q ss_pred ccceec---cHHHHHh--cCCceEeccceEeeeccccccc-CCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccC
Q psy2324 73 RGTYSN---DPAIIRQ--NHRMTAINTCLEIDITGQVVSD-SLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDN 146 (170)
Q Consensus 73 p~~~tN---~P~~Iar--~~~~vsINsaleVDL~GQvnse-~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~ 146 (170)
|+.++. -|+.+.. ++-=+|+=.+-..|=.|+++-+ ..- .-++.+|...+..+ ++-+|+-- .+
T Consensus 139 P~~~s~~~g~p~ll~~~~l~iDVAlI~as~aD~~Gnls~~~g~~------~~~s~~~~~a~a~~----A~~VIaEV--n~ 206 (509)
T 1xr4_A 139 PVQIHSHGGRVKLIQSGELNIDVAFLGVPCCDEFGNANGFSGKS------RCGSLGYAQVDAQY----AKCVVLLT--EE 206 (509)
T ss_dssp CEEECCHHHHHHHHHTTSSCCSEEEEEESEEETTCCEESSSSSS------CCCCCTTHHHHHHH----CSEEEEEE--SC
T ss_pred CeeEeccCCHHHHHhcCCCCceEEEEEeccCCCCceEEEeCCCC------cccchHHHHHHHhh----CCEEEEEe--CC
Confidence 888884 7888862 3222666666688888887642 100 01355566666655 44455542 22
Q ss_pred CCCC-C-CCCCC--CCceEE
Q psy2324 147 SMPL-L-GSNPG--PPDYQA 162 (170)
Q Consensus 147 ~~~~-l-~s~~~--~~~~~~ 162 (170)
..|. + +.-+. .+|++|
T Consensus 207 ~vP~~~~~~~Ip~~~VD~IV 226 (509)
T 1xr4_A 207 WVEFPNYPASIAQDQVDLIV 226 (509)
T ss_dssp EECSSCSSCSBCGGGCSEEE
T ss_pred CCCCCCCCcccCcEeeEEEE
Confidence 2232 1 12222 788887
No 17
>2hjq_A Hypothetical protein YQBF; two-domain, structure, BSU26130, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Bacillus subtilis} SCOP: a.140.3.2 d.344.1.1
Probab=74.61 E-value=2.1 Score=31.73 Aligned_cols=21 Identities=24% Similarity=0.556 Sum_probs=18.9
Q ss_pred eecC-----chHHHHhcccCCceeee
Q psy2324 52 LLLG-----DKPLYDFVHNNELVQMK 72 (170)
Q Consensus 52 fa~G-----s~~LY~~~d~np~v~~~ 72 (170)
|.+| ++++|+|+++||.|++|
T Consensus 19 Fll~~Ee~V~Kk~Y~YL~~Ne~F~VR 44 (111)
T 2hjq_A 19 FRAGVSQTVPKKLYEYLNENPYFILT 44 (111)
T ss_dssp EEBTCEEEECHHHHHHHHHSTTEEEE
T ss_pred EecCchhhhhHHHHHHhcCCCcEEee
Confidence 5555 89999999999999999
No 18
>1k6d_A Acetate COA-transferase alpha subunit; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: c.124.1.2
Probab=51.21 E-value=7.3 Score=31.09 Aligned_cols=58 Identities=12% Similarity=0.109 Sum_probs=38.8
Q ss_pred CchHHHHHhcc--cCCCceEEecccch---HHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCC
Q psy2324 1 KIPEAILSNIK--HQINLGVHTELLTP---GVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNE 67 (170)
Q Consensus 1 ~ipnAV~~~L~--~~kdLgvhTEm~~D---~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np 67 (170)
+.|.++..+|. +.+||.+++....+ ++-.|++.|.+.. ..+++..-+..+-+.+.++.
T Consensus 30 g~P~~l~~aL~~~~~~dLtl~~~~~g~~~~g~~~l~~~g~v~~---------~~~s~~~~~~~~r~~~~~G~ 92 (220)
T 1k6d_A 30 GTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRK---------VIASHIGTNPETGRRMISGE 92 (220)
T ss_dssp TCCHHHHHHHHHHTCCSEEEECSBCCCTTSTTHHHHHTTCEEE---------EEESBCTTCHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHCCCCCEEEEEecCCCCccCHHHHhhCCCccE---------EEEcCCCCCHHHHHHHHCCC
Confidence 35889999996 46999998865432 3567999998854 24445333456666666553
No 19
>2g39_A Acetyl-COA hydrolase; coenzyme A transferase, structural G PSI, protein structure initiative, midwest center for struc genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: c.124.1.2 c.124.1.2
Probab=48.18 E-value=19 Score=32.49 Aligned_cols=93 Identities=16% Similarity=0.180 Sum_probs=58.6
Q ss_pred chHHHHHhcccC---CC--ceEEec-ccchHHH-HHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeecc
Q psy2324 2 IPEAILSNIKHQ---IN--LGVHTE-LLTPGVI-KLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRG 74 (170)
Q Consensus 2 ipnAV~~~L~~~---kd--LgvhTE-m~~D~~~-~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~ 74 (170)
.|.++..+|.++ +| |.++|. -+.+..- +|+++|.+.. +.+| .....+-+.+.++ .+.+-|+
T Consensus 41 ~P~~Li~AL~~r~~~~dl~Ltl~~~~~~g~~~~~~l~~~g~v~~----------~~~~-~~~~~~r~~i~~G-~v~fvP~ 108 (497)
T 2g39_A 41 EAKAVPQALAMRAKERPLRISLMTGASLGNDLDKQLTEAGVLAR----------RMPF-QVDSTLRKAINAG-EVMFIDQ 108 (497)
T ss_dssp CCCHHHHHHHHHHHHSCCCEEEECSSCCCTTHHHHHHHTTCEEE----------EESC-CCCHHHHHHHHTT-SSEECCC
T ss_pred CHHHHHHHHHHhhhcCCceEEEEecccccccchHHHhcCCceEE----------EEee-CCCHHHHHHHHcC-CCeEECC
Confidence 467777777543 77 667774 2233222 7888888853 2234 3345566666555 4789999
Q ss_pred ceeccHHHHHhcC---CceEeccceEeeecccccc
Q psy2324 75 TYSNDPAIIRQNH---RMTAINTCLEIDITGQVVS 106 (170)
Q Consensus 75 ~~tN~P~~Iar~~---~~vsINsaleVDL~GQvns 106 (170)
-+.+-|+.+..-. -=+|+=.+-..|=.|+++-
T Consensus 109 ~ls~~~~~l~~~~l~~~DVAlI~as~aDe~Gnls~ 143 (497)
T 2g39_A 109 HLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVP 143 (497)
T ss_dssp CTTTHHHHHHTTSSCCCSEEEEEESEECTTSCEEC
T ss_pred ccccHHHHHHcCCcCCCCEEEEEecccCCCceEEE
Confidence 9988888887431 1266666667788887654
No 20
>3eh7_A 4-hydroxybutyrate COA-transferase; citrate lyase, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.05A {Porphyromonas gingivalis}
Probab=37.85 E-value=22 Score=31.50 Aligned_cols=113 Identities=18% Similarity=0.123 Sum_probs=53.0
Q ss_pred hHHHHHhccc----CCCceEEecccchHHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceec
Q psy2324 3 PEAILSNIKH----QINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSN 78 (170)
Q Consensus 3 pnAV~~~L~~----~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN 78 (170)
|.++..+|.+ .+||.+++..-. +-.++.+.+....-. ..++.+| ..+-+.+.++ .+.+-|+-+..
T Consensus 40 P~~L~~ALa~r~~~l~~v~l~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~-~~~r~~i~~G-~~~~~p~~ls~ 108 (434)
T 3eh7_A 40 PQSCVDALVQQADLFQNVEIYHMLCL-GEGKYMAPEMAPHFR--------HITNFVG-GNSRKAVEEN-RADFIPVFFYE 108 (434)
T ss_dssp CHHHHHHHHHSTTTC--CEEECCBCT-TCC---------------------------------------CTTCCCCCGGG
T ss_pred HHHHHHHHHHhHhhcCCeEEEEeccC-CchhhcChhhhCeEE--------EecCcCC-HHHHHHHHCC-CccccChhHHH
Confidence 5666666644 489999985422 223355555443211 1233343 5555556554 45788999999
Q ss_pred cHHHHHh--cCCceEeccceEeeecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEe
Q psy2324 79 DPAIIRQ--NHRMTAINTCLEIDITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQIL 141 (170)
Q Consensus 79 ~P~~Iar--~~~~vsINsaleVDL~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial 141 (170)
-|+.++. ++-=+|+=.+-..|=.|+++- | -+.||..-+..+ ++-+|+-
T Consensus 109 ~~~~~~~g~~~~DVAli~as~~D~~Gn~s~---g--------~s~~~~~~~~~~----A~~VI~e 158 (434)
T 3eh7_A 109 VPSMIRKDILHIDVAIVQLSMPDENGYCSF---G--------VSCDYSKPAAES----AHLVIGE 158 (434)
T ss_dssp HHHHHHTTSSCCSEEEEEECCCCTTSEEEC---T--------TBCTTHHHHHHH----CSEEEEE
T ss_pred HHHHHHhCCCCCcEEEEEEecCCCCCCEEe---c--------CccchHHHHHHh----CCeEEEE
Confidence 9999987 322267777777888888852 2 245666666655 4445554
No 21
>3rrl_A Succinyl-COA:3-ketoacid-coenzyme A transferase SU; MCSG,PSI-biology, structural genomics, midwest center for ST genomics; 2.29A {Helicobacter pylori}
Probab=36.75 E-value=11 Score=30.85 Aligned_cols=57 Identities=23% Similarity=0.173 Sum_probs=39.6
Q ss_pred CchHHHHHhccc--CCCceEEecccch---HHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccC
Q psy2324 1 KIPEAILSNIKH--QINLGVHTELLTP---GVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNN 66 (170)
Q Consensus 1 ~ipnAV~~~L~~--~kdLgvhTEm~~D---~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~n 66 (170)
+.|.++..+|.+ .|||.+.+.-..+ ++-.|+++|.|.. .++++.--+++|-+-+.++
T Consensus 33 g~P~~li~aL~~~~~kdLtli~~~~g~~~~g~~~L~~~G~v~r---------~i~s~~g~~~~~~~~~~~G 94 (235)
T 3rrl_A 33 GIPEYAIDYIYKKGIKDLIVVSNNCGVDDFGLGILLEKKQIKK---------IIASYVGENKIFESQMLNG 94 (235)
T ss_dssp TCCHHHHHHHHHHTCCSEEEECSCCCCSSSGGGGGGTTTCEEE---------EEESCCCSCHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCcEEEEEcCCCCCCcCHHHHHhCCCeeE---------EEeccccCCHHHHHHHHcC
Confidence 368899999854 5999999874332 6778899999864 3555544456666666655
No 22
>1poi_A Glutaconate coenzyme A-transferase; COA, glutamate, protein fermentation; 2.50A {Acidaminococcus fermentans} SCOP: c.124.1.2
Probab=36.04 E-value=37 Score=28.59 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=37.5
Q ss_pred CchHHHHHhcc--cCCCceEEecccchHHHHHHHcCCccccccccCCCceEEEe----ecC--chHHHHhcccC
Q psy2324 1 KIPEAILSNIK--HQINLGVHTELLTPGVIKLFNSGVINNSKKSIDRGQITATL----LLG--DKPLYDFVHNN 66 (170)
Q Consensus 1 ~ipnAV~~~L~--~~kdLgvhTEm~~D~~~~L~~~G~vt~~~k~~~~g~~v~~f----a~G--s~~LY~~~d~n 66 (170)
+.|.+++.+|. +.|||.+.+-...-+.-.|++.|.+.. .+++| .+| +..+-+.+.++
T Consensus 29 g~P~~li~aL~~~~~~dLtlv~~~~g~~~~~l~~~g~v~~---------~~~s~~~~~~~~~~~~~~r~~~~~G 93 (317)
T 1poi_A 29 RKPYAAVFEILRQGITDLTGLGGAAGGDWDMLIGNGRVKA---------YINCYTANSGVTNVSRRFRKWFEAG 93 (317)
T ss_dssp SCCHHHHHHHHHTTCCCEEEECSEECHHHHHHHHTTCEEE---------EEESEECBTTTBSSCHHHHHHHHHT
T ss_pred CcHHHHHHHHHhCCCCCEEEEEECCCCChHHHhccCceeE---------EEcccccccccccCChHHHHHHHCC
Confidence 36899999996 459999985443444478999998753 35554 223 35566666555
No 23
>3cdk_A Succinyl-COA:3-ketoacid-coenzyme A transferase subunit A; CO-expressed complex, hetero-tetramer, structural genomics, PSI-2; 2.59A {Bacillus subtilis}
Probab=35.62 E-value=29 Score=28.08 Aligned_cols=57 Identities=19% Similarity=0.213 Sum_probs=37.5
Q ss_pred CchHHHHHhcc--cCCCceEEeccc-ch--HHHHHHHcCCccccccccCCCceEEEeecCchHHHHhcccC
Q psy2324 1 KIPEAILSNIK--HQINLGVHTELL-TP--GVIKLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNN 66 (170)
Q Consensus 1 ~ipnAV~~~L~--~~kdLgvhTEm~-~D--~~~~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~n 66 (170)
+.|.+++.+|. +.+||.+++... .| ++-.|++.|.+.. ..+++..-+..+-+.+.++
T Consensus 33 g~P~~li~aL~~~~~~dLtl~~~~~~~~~~gl~~l~~~g~v~~---------~~~s~~g~~~~~r~~~~~G 94 (241)
T 3cdk_A 33 GIPEQLILSIRDQGVKDLTVVSNNCGVDDWGLGLLLANKQIKK---------MIASYVGENKIFERQFLSG 94 (241)
T ss_dssp TCCHHHHHHHHHHTCCSEEEEESSCCCSSSTTHHHHHTTCEEE---------EEESBCCSCHHHHHHHTTT
T ss_pred CcHHHHHHHHHHcCCCCEEEEEecCCCCCccHHHHhhCCCcCe---------EEEeccCCCHHHHHHHHCC
Confidence 36889999986 469999987643 22 3467999998863 2444433345566655554
No 24
>2nvv_A Acetyl-COA hydrolase/transferase family protein; alpha beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Porphyromonas gingivalis}
Probab=28.20 E-value=48 Score=29.89 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=51.0
Q ss_pred CceEEecc-cchHHH-HHHHcCCccccccccCCCceEEEeecCchHHHHhcccCCceeeeccceeccHHHHHh--cC-Cc
Q psy2324 15 NLGVHTEL-LTPGVI-KLFNSGVINNSKKSIDRGQITATLLLGDKPLYDFVHNNELVQMKRGTYSNDPAIIRQ--NH-RM 89 (170)
Q Consensus 15 dLgvhTEm-~~D~~~-~L~~~G~vt~~~k~~~~g~~v~~fa~Gs~~LY~~~d~np~v~~~p~~~tN~P~~Iar--~~-~~ 89 (170)
+|.++|.. +.+..- +|++.|.+.. +.+| .....+-+.+.++ .+.+-|+-+++-|+.+.. ++ -=
T Consensus 54 ~Ltl~~~~s~g~~~~~~l~~~g~v~~----------~~~~-~~~~~~r~~i~~G-~i~~~P~~ls~v~~~l~~~~l~~~D 121 (506)
T 2nvv_A 54 KIGMFTGASTGARLDGVLAQADAVKF----------RTPY-QSNKDLRNLINNG-STSYFDLHLSTLAQDLRYGFYGKVD 121 (506)
T ss_dssp CEEEECSSCCCTTTHHHHHHTTCEEE----------EESC-CCCHHHHHHHHTT-SSEECCCCGGGHHHHHHTTSSCCCC
T ss_pred eEEEEEecCCCcchhHHhccCCceEE----------Eeee-CCCHHHHHHHHcC-CCeEeCCCcccHHHHHHcCCcCCCC
Confidence 68877742 222211 7888888753 2234 3345566666555 478999999999988875 31 22
Q ss_pred eEeccceEeeecccccc
Q psy2324 90 TAINTCLEIDITGQVVS 106 (170)
Q Consensus 90 vsINsaleVDL~GQvns 106 (170)
+|+=.+-..|=.|+++-
T Consensus 122 VAlI~as~aDe~Gnls~ 138 (506)
T 2nvv_A 122 VAIIEVADVTEDGKILP 138 (506)
T ss_dssp EEEEEESEECTTSEEEC
T ss_pred EEEEEecccCCCceEEE
Confidence 66666667888887755
No 25
>3hy3_A 5-formyltetrahydrofolate cyclo-ligase; antifolate, cancer, ATP-binding, binding, magnesium, nucleotide-binding; HET: 10F; 1.80A {Homo sapiens} PDB: 3hxt_A* 3hy4_A* 3hy6_A
Probab=22.22 E-value=2.2e+02 Score=21.84 Aligned_cols=67 Identities=13% Similarity=-0.046 Sum_probs=39.5
Q ss_pred ecccccccCCCCeeeeccCchHHHHHHHhhCCCCCCcEEEEeeeccCCCCCCCCCCC--CCceEEeeeee
Q psy2324 100 ITGQVVSDSLGTRIYSGFGGQVDFMRGALTGLDGKGLKYQILVHEDNSMPLLGSNPG--PPDYQASAWKI 167 (170)
Q Consensus 100 L~GQvnse~iG~r~~sG~GGq~DF~rgA~~S~gg~G~sIial~St~~~~~~l~s~~~--~~~~~~te~gi 167 (170)
|.-=|+-+.-|.|.==| ||-+|=.-.......+..--.|++.=...-.+.++...+ ..|++|||.|+
T Consensus 133 lVP~vaFD~~G~RLG~G-gGyYDR~L~~~~~~~~~~~~~igla~~~Q~~~~lP~e~hDi~ld~iiTe~~~ 201 (203)
T 3hy3_A 133 FMPGLGFDKHGNRLGRG-KGYYDAYLKRCLQHQEVKPYTLALAFKEQICLQVPVNENDMKVDEVLYEDSS 201 (203)
T ss_dssp EECCSEECTTCCEECSS-SCHHHHHHHHHTTTCSSCCEEEEECCGGGBCSCCCCC--CCCCSEEECC---
T ss_pred EeCCeEECCCCceecCC-CchHHHHHHHhhhhcCCCCeEEEEecHHhccCCCCCCcccccCCEEEeCCCc
Confidence 44555666667777666 899996554433221111224677666566677887776 78999999986
Done!