Query psy2336
Match_columns 222
No_of_seqs 128 out of 1139
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 21:58:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2336.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2336hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00176 galactinol synthase 100.0 1.6E-39 3.5E-44 286.4 16.0 199 4-215 67-300 (333)
2 cd02537 GT8_Glycogenin Glycoge 100.0 1.7E-35 3.6E-40 251.8 16.6 196 4-209 44-240 (240)
3 cd00505 Glyco_transf_8 Members 100.0 2.6E-30 5.6E-35 220.3 12.5 173 5-179 45-246 (246)
4 cd06914 GT8_GNT1 GNT1 is a fun 100.0 5.5E-29 1.2E-33 215.0 13.6 173 34-208 74-277 (278)
5 PRK15171 lipopolysaccharide 1, 100.0 5.9E-29 1.3E-33 221.0 9.9 184 7-210 75-290 (334)
6 cd04194 GT8_A4GalT_like A4GalT 100.0 1E-28 2.3E-33 210.2 7.7 170 5-179 45-248 (248)
7 cd06429 GT8_like_1 GT8_like_1 100.0 3.2E-28 6.8E-33 209.0 9.4 144 39-207 100-257 (257)
8 cd06431 GT8_LARGE_C LARGE cata 99.9 1E-27 2.2E-32 208.3 9.9 162 40-217 84-278 (280)
9 PF01501 Glyco_transf_8: Glyco 99.9 5.3E-28 1.1E-32 203.2 6.6 172 4-180 44-249 (250)
10 COG1442 RfaJ Lipopolysaccharid 99.9 4.9E-25 1.1E-29 194.0 9.8 169 7-181 52-248 (325)
11 PLN02659 Probable galacturonos 99.9 1.3E-23 2.9E-28 192.2 8.6 157 33-209 322-522 (534)
12 PLN02867 Probable galacturonos 99.9 1E-23 2.2E-28 193.6 7.8 156 33-207 323-522 (535)
13 PLN02769 Probable galacturonos 99.9 8.4E-23 1.8E-27 190.2 8.4 155 34-208 431-618 (629)
14 PLN02829 Probable galacturonos 99.9 1.6E-22 3.4E-27 187.6 8.3 156 33-208 435-627 (639)
15 PLN02523 galacturonosyltransfe 99.9 1.3E-22 2.9E-27 186.2 7.3 149 39-208 363-547 (559)
16 PLN02870 Probable galacturonos 99.9 1.2E-22 2.6E-27 186.0 6.3 154 34-207 322-519 (533)
17 PLN02742 Probable galacturonos 99.9 6.9E-22 1.5E-26 181.3 8.4 156 33-208 331-523 (534)
18 PLN02910 polygalacturonate 4-a 99.9 6.8E-22 1.5E-26 183.2 7.9 155 33-207 453-644 (657)
19 cd06430 GT8_like_2 GT8_like_2 99.9 2.4E-21 5.2E-26 169.0 10.9 163 39-219 83-286 (304)
20 PLN02718 Probable galacturonos 99.8 2.2E-21 4.8E-26 180.1 9.7 149 39-207 404-590 (603)
21 cd06432 GT8_HUGT1_C_like The C 99.8 1.4E-19 3E-24 154.9 6.8 124 39-172 81-239 (248)
22 COG5597 Alpha-N-acetylglucosam 99.6 9.8E-17 2.1E-21 137.8 2.7 153 32-209 148-359 (368)
23 KOG1950|consensus 98.9 5E-09 1.1E-13 94.6 7.6 164 40-210 152-321 (369)
24 PF03407 Nucleotid_trans: Nucl 98.4 2.4E-06 5.2E-11 70.9 10.0 167 4-172 15-201 (212)
25 PLN03182 xyloglucan 6-xylosylt 96.6 0.0058 1.2E-07 55.6 6.4 131 38-178 179-363 (429)
26 KOG1928|consensus 94.5 0.074 1.6E-06 48.1 5.3 75 56-132 242-319 (409)
27 KOG1879|consensus 94.3 0.023 4.9E-07 57.9 1.8 116 51-180 1276-1426(1470)
28 PF05637 Glyco_transf_34: gala 94.1 0.032 7E-07 47.5 2.1 130 38-173 58-232 (239)
29 PF11051 Mannosyl_trans3: Mann 93.5 0.044 9.5E-07 47.5 2.0 34 42-75 81-114 (271)
30 PLN03181 glycosyltransferase; 88.6 0.99 2.1E-05 41.5 5.5 104 37-147 179-325 (453)
31 PRK15384 type III secretion sy 87.4 0.58 1.3E-05 40.1 3.1 50 51-100 215-265 (336)
32 PRK15382 non-LEE encoded effec 87.2 0.64 1.4E-05 39.8 3.2 50 51-100 210-260 (326)
33 PRK15383 type III secretion sy 86.0 0.8 1.7E-05 39.2 3.2 50 51-100 218-268 (335)
34 cd02515 Glyco_transf_6 Glycosy 77.9 3 6.5E-05 36.2 3.8 129 35-175 99-265 (271)
35 PF04488 Gly_transf_sug: Glyco 76.8 1.4 2.9E-05 32.2 1.3 18 56-73 80-98 (103)
36 KOG1950|consensus 74.1 3.5 7.6E-05 37.3 3.5 36 40-75 113-148 (369)
37 PF03314 DUF273: Protein of un 73.1 14 0.00031 31.0 6.4 81 49-130 39-127 (222)
38 PF04765 DUF616: Protein of un 48.5 21 0.00044 31.7 3.4 40 34-73 134-174 (305)
39 KOG4748|consensus 45.2 59 0.0013 29.6 5.8 132 36-173 155-333 (364)
40 PF03414 Glyco_transf_6: Glyco 42.4 21 0.00045 32.1 2.5 112 34-148 163-312 (337)
41 PF05704 Caps_synth: Capsular 36.9 53 0.0012 28.5 4.2 71 39-112 112-188 (276)
No 1
>PLN00176 galactinol synthase
Probab=100.00 E-value=1.6e-39 Score=286.39 Aligned_cols=199 Identities=28% Similarity=0.507 Sum_probs=162.6
Q ss_pred hhHHHhhhCCEEEEEeccCCCccccccccCCCCccchhhhhccCccCCcceEEEEecCeeecCCChhhhCCC--Cccccc
Q psy2336 4 APNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE--ELSAAP 81 (222)
Q Consensus 4 ~~~~L~~~~~~vi~v~~~~~~~~~~~~~~~~~~~~~~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~--~~aav~ 81 (222)
++++|++.+..|++|+++.+.. .+....++++..+|+||++|++++|+||||||||+||++|||+||+++ .++||.
T Consensus 67 ~r~~L~~~g~~V~~V~~i~~~~--~~~~~~~~~~~i~~tKl~iw~l~~ydkvlyLDaD~lv~~nid~Lf~~~~~~~aAV~ 144 (333)
T PLN00176 67 HRRILVSQGCIVREIEPVYPPE--NQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVM 144 (333)
T ss_pred HHHHHHHcCCEEEEecccCCcc--cccccccchhhhhhhhhhhccccccceEEEecCCEEeecChHHHhcCCCcceEEEe
Confidence 5899999999999999987633 233455678888999999999999999999999999999999999996 366665
Q ss_pred CC------------------------CCC--------CcccceEEEEeCCHHHHHHHHHHHHHcCCCCCCchHHHHHHHh
Q psy2336 82 DA------------------------GWP--------DCFNSGVFVFKPSESTYNALVEFALVNGSFDGGDQGLLNLYFS 129 (222)
Q Consensus 82 d~------------------------~~~--------~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~iLN~~~~ 129 (222)
|. +|| .||||||||++|+..+++++++.+.....+.++|||+||.+|.
T Consensus 145 dc~~~~~~~~~p~~~~~~c~~~~~~~~wp~~~g~~~~~yFNSGVlvinps~~~~~~ll~~l~~~~~~~f~DQD~LN~~F~ 224 (333)
T PLN00176 145 DCFCEKTWSHTPQYKIGYCQQCPDKVTWPAELGPPPPLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAEQDFLNMFFR 224 (333)
T ss_pred cccccccccccccccccccccchhhccchhhccCCCCCeEEeEEEEEEcCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHc
Confidence 52 122 4899999999999999999999988766677899999999999
Q ss_pred ccccCCCCCCCCcccccccCcccccchHHHhhCCCcEEEEecC-CCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhh
Q psy2336 130 DWATADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIG-SSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVV 208 (222)
Q Consensus 130 ~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~~IiHf~g-~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 208 (222)
+ .+..||.+||++....+++...++ .++++||||+| ..|||+..+... .+++++...+.+.||++|++
T Consensus 225 ~-----~~~~Lp~~YN~~~~~~~~~~~~~~--~~~vkIIHY~~~~~KPW~~~~~~~----~~~~~~~~~~~~~Ww~~~~~ 293 (333)
T PLN00176 225 D-----IYKPIPPVYNLVLAMLWRHPENVE--LDKVKVVHYCAAGSKPWRYTGKEE----NMDREDIKMLVKKWWDIYND 293 (333)
T ss_pred C-----cEEECCchhcCchhhhhhChhhcc--cCCcEEEEeeCCCCCCCCCCCccc----CCChHHHHHHHHHHHHHhcc
Confidence 7 235999999998766665544343 57899999996 589999775332 24555677899999999999
Q ss_pred ccCCccc
Q psy2336 209 HVHPTLT 215 (222)
Q Consensus 209 ~~~~~~~ 215 (222)
...+++.
T Consensus 294 ~~~~~~~ 300 (333)
T PLN00176 294 ESLDYKN 300 (333)
T ss_pred ccccccc
Confidence 9877653
No 2
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=100.00 E-value=1.7e-35 Score=251.78 Aligned_cols=196 Identities=49% Similarity=0.826 Sum_probs=159.6
Q ss_pred hhHHHhhhCCEEEEEeccCCCccccccccCCCCccchhhhhccCccCCcceEEEEecCeeecCCChhhhCC-CCcccccC
Q psy2336 4 APNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDR-EELSAAPD 82 (222)
Q Consensus 4 ~~~~L~~~~~~vi~v~~~~~~~~~~~~~~~~~~~~~~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~-~~~aav~d 82 (222)
.++.|++++.+++.|+.+....... ...+.++.++|+||.+|++.+++||||||+|++|++||++||+. ..++|++|
T Consensus 44 ~~~~L~~~~~~~~~v~~i~~~~~~~--~~~~~~~~~~~~kl~~~~l~~~drvlylD~D~~v~~~i~~Lf~~~~~~~a~~d 121 (240)
T cd02537 44 SREALEEVGWIVREVEPIDPPDSAN--LLKRPRFKDTYTKLRLWNLTEYDKVVFLDADTLVLRNIDELFDLPGEFAAAPD 121 (240)
T ss_pred HHHHHHHcCCEEEecCccCCcchhh--hccchHHHHHhHHHHhccccccceEEEEeCCeeEccCHHHHhCCCCceeeecc
Confidence 3678999999999999987654432 12356777899999999999999999999999999999999999 47888988
Q ss_pred CCCCCcccceEEEEeCCHHHHHHHHHHHHHcCCCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHhhC
Q psy2336 83 AGWPDCFNSGVFVFKPSESTYNALVEFALVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFG 162 (222)
Q Consensus 83 ~~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~ 162 (222)
..++.+||||||+++++...++++++.+.+...+.++||++||.+|++.. .+..||.+||++....+...+. ....
T Consensus 122 ~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~DQdiLN~~~~~~~---~~~~l~~~yN~~~~~~~~~~~~-~~~~ 197 (240)
T cd02537 122 CGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLLNSYFSDRG---IWKRLPFTYNALKPLRYLHPEA-LWFG 197 (240)
T ss_pred cCccccccceEEEEcCCHHHHHHHHHHHhccCCCCCCCHHHHHHHHcCCC---CEeECCcceeeehhhhccCchh-hccc
Confidence 87778999999999999999999999998766677899999999998620 1569999999987654432221 2235
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhhc
Q psy2336 163 SKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVVH 209 (222)
Q Consensus 163 ~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 209 (222)
++++||||+|..|||+..+.+++.. ..+.....+.||+.|+++
T Consensus 198 ~~~~iiHf~g~~KPW~~~~~~~~~~----~~~~~~~~~~w~~~~~~~ 240 (240)
T cd02537 198 DEIKVVHFIGGDKPWSWWRDPETKE----KDDYNELHQWWWDIYDEL 240 (240)
T ss_pred CCcEEEEEeCCCCCCCCCcCCCccc----ccchHHHHHHHHHHHhhC
Confidence 7899999999999999888765432 234678999999999864
No 3
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=99.97 E-value=2.6e-30 Score=220.31 Aligned_cols=173 Identities=42% Similarity=0.643 Sum_probs=122.9
Q ss_pred hHHHhhh---CCEEEEEeccCCCccccccccCCCCccchhhhhccCccCC-cceEEEEecCeeecCCChhhhCCC----C
Q psy2336 5 PNELLKV---FNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQ-YSKCVFLDADVLIVQNCDELFDRE----E 76 (222)
Q Consensus 5 ~~~L~~~---~~~vi~v~~~~~~~~~~~~~~~~~~~~~~~~Kl~i~~L~~-ydrVLyLDaD~iv~~did~LF~~~----~ 76 (222)
++.|+++ +...+++.++..................+|.||.++++++ ++||||||+|+||++||++||+++ .
T Consensus 45 ~~~L~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~RL~i~~llp~~~kvlYLD~D~iv~~di~~L~~~~l~~~~ 124 (246)
T cd00505 45 KAALDNLRKLYNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLTDIDELWDTPLGGQE 124 (246)
T ss_pred HHHHHHHHhccCceEEEEeccccCcchhhhhcCccccceeHHHHHHHHhhccCeEEEEcCCeeeccCHHHHhhccCCCCe
Confidence 3455543 2334455555433222211112344557899999999987 999999999999999999999996 4
Q ss_pred cccccCCC-------------C---CCcccceEEEEeCCHHHHHHHHHHHHH-----cCCCCCCchHHHHHHHhccccCC
Q psy2336 77 LSAAPDAG-------------W---PDCFNSGVFVFKPSESTYNALVEFALV-----NGSFDGGDQGLLNLYFSDWATAD 135 (222)
Q Consensus 77 ~aav~d~~-------------~---~~~fNsGvmli~~~~~~~~~l~~~~~~-----~~~~~~~DQ~iLN~~~~~~~~~~ 135 (222)
+|||+|.+ + ..||||||||+|+++.+++++++...+ .....++||++||.+|.+.. .
T Consensus 125 ~aav~d~~~~~~~~~~~~~~~~~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~~~--~ 202 (246)
T cd00505 125 LAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLSSLSGGDQDLLNTFFKQVP--F 202 (246)
T ss_pred EEEccCchhhhccchhhcccCCCCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcccCccCCcHHHHHHHhcCC--C
Confidence 67777642 1 259999999999998877777665432 23567899999999998731 1
Q ss_pred CCCCCCcccccccCcccccchHHHhhCCCcEEEEecCCCCCCCC
Q psy2336 136 SSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIGSSKPWLQ 179 (222)
Q Consensus 136 ~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~~IiHf~g~~KPW~~ 179 (222)
.+..||.+||++....+...+.......+++||||+|..|||+.
T Consensus 203 ~i~~L~~~wN~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 203 IVKSLPCIWNVRLTGCYRSLNCFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred eEEECCCeeeEEecCccccccchhhhcCCCEEEEeCCCCCCCCC
Confidence 25699999999886544322222334679999999999999973
No 4
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.96 E-value=5.5e-29 Score=215.04 Aligned_cols=173 Identities=25% Similarity=0.316 Sum_probs=128.6
Q ss_pred CCCccchhhhhccCccCCcceEEEEecCeeecCCChhhhCCC-C-cccccCCCCCCcccceEEEEeCCHHHHHHHHHHHH
Q psy2336 34 RPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE-E-LSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFAL 111 (222)
Q Consensus 34 ~~~~~~~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~-~-~aav~d~~~~~~fNsGvmli~~~~~~~~~l~~~~~ 111 (222)
+++|..+|+||.+|++++|+||||||||++|++|||+||+++ . ..|+++.+| +||||||||+|+.+.+++|.+.+.
T Consensus 74 ~~~~~~~~tKl~~~~l~~y~kvlyLDaD~l~~~~ideLf~~~~~~~~Aap~~~~--~FNSGvmvi~ps~~~~~~l~~~~~ 151 (278)
T cd06914 74 DAYWAKSLTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYW--KFASHLMVIKPSKEAFKELMTEIL 151 (278)
T ss_pred CccHHHHHHHHHhccccceeeEEEecCChhhhcChHHHhcCCcccceeeecCcc--eecceeEEEeCCHHHHHHHHHHHH
Confidence 567888899999999999999999999999999999999997 2 235566555 999999999999999999999987
Q ss_pred HcC--CCCCCchHHHHHHHhccc--cCCCCCCCCcc-cccccCccccc-------ch-----HH--HhhCCCcEEEEecC
Q psy2336 112 VNG--SFDGGDQGLLNLYFSDWA--TADSSKRLPFI-YNMCSTSTYSY-------LP-----AL--KQFGSKVKIIHFIG 172 (222)
Q Consensus 112 ~~~--~~~~~DQ~iLN~~~~~~~--~~~~~~~Lp~~-yN~~~~~~~~~-------~~-----~~--~~~~~~~~IiHf~g 172 (222)
+.. ...++|||+||.+|.++. ....+..||.+ ||++.+...+. .+ .| .+.-.++++|||++
T Consensus 152 ~~~~~~~~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd 231 (278)
T cd06914 152 PAYLNKKNEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREKLHKSFLSNAQHLYEKWDPDDVFKESKVIHFSD 231 (278)
T ss_pred HhcccCCCCCChHHHHHHHhCCccccCcceEEcCccccccCChhhcccCHHHhhccccccccccCHHHHHhhCeEEEecC
Confidence 643 235789999999999841 01124689986 99987632111 10 11 12236899999998
Q ss_pred C--CCCCCCCCCCCC-------cc-cccCCccchHHHHHHHHHHhh
Q psy2336 173 S--SKPWLQHFDSTT-------GA-ILSGDSHLTNFLQLWWDVFVV 208 (222)
Q Consensus 173 ~--~KPW~~~~~~~~-------~~-~~~~~~~~~~~~~~Ww~~~~~ 208 (222)
. +|||.......- .. ........+..+++|+..|++
T Consensus 232 ~Pl~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~iW~~~y~~ 277 (278)
T cd06914 232 SPLPKPWNYNNLEDIYCIEKIYCKMVKPRLEDDCRACDLWNSLYAD 277 (278)
T ss_pred CCCCCCcCCcCHHHHHHhCCccccCCCCCccCcchHHHHHHHHhhc
Confidence 5 899998753210 00 111123457899999999875
No 5
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=99.96 E-value=5.9e-29 Score=220.97 Aligned_cols=184 Identities=20% Similarity=0.271 Sum_probs=128.8
Q ss_pred HHhhhCCEEEEEeccCCCccccccccCCCCc-cchhhhhccCccC--CcceEEEEecCeeecCCChhhhCCC----Cccc
Q psy2336 7 ELLKVFNFVKEVDVFDSRDETNLRLLSRPDL-GITFTKIHAWRLT--QYSKCVFLDADVLIVQNCDELFDRE----ELSA 79 (222)
Q Consensus 7 ~L~~~~~~vi~v~~~~~~~~~~~~~~~~~~~-~~~~~Kl~i~~L~--~ydrVLyLDaD~iv~~did~LF~~~----~~aa 79 (222)
.|.+.+..-|.+..++.......+. ...+ .++|+||.+++++ +++||||||||+||.+||++||+++ .+||
T Consensus 75 ~l~~~~~~~i~~~~id~~~~~~~~~--~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aa 152 (334)
T PRK15171 75 ALAKQYNTRINIYLINCERLKSLPS--TKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAA 152 (334)
T ss_pred HHHHhcCCeEEEEEeCHHHHhCCcc--cCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEE
Confidence 3444555556666665433332211 2233 3689999999986 5999999999999999999999986 3566
Q ss_pred cc-CC------------CCC----CcccceEEEEeCCHHH----HHHHHHHHHHc---CCCCCCchHHHHHHHhccccCC
Q psy2336 80 AP-DA------------GWP----DCFNSGVFVFKPSEST----YNALVEFALVN---GSFDGGDQGLLNLYFSDWATAD 135 (222)
Q Consensus 80 v~-d~------------~~~----~~fNsGvmli~~~~~~----~~~l~~~~~~~---~~~~~~DQ~iLN~~~~~~~~~~ 135 (222)
|. +. +.+ .||||||||||++.+. .+++++.+.+. ..+.++|||+||.+|.+
T Consensus 153 v~~d~~~~~~~~~~~~l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~----- 227 (334)
T PRK15171 153 VVAEGDAEWWSKRAQSLQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAG----- 227 (334)
T ss_pred EEeccchhHHHHHHHhcCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcC-----
Confidence 53 21 112 4999999999998654 44555555543 35678899999999997
Q ss_pred CCCCCCcccccccCcccccchHH-HhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhhcc
Q psy2336 136 SSKRLPFIYNMCSTSTYSYLPAL-KQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVVHV 210 (222)
Q Consensus 136 ~~~~Lp~~yN~~~~~~~~~~~~~-~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~ 210 (222)
.+..||.+||++.+..++....+ .....+|+||||+|..|||+..+ ..+..+.||.++....
T Consensus 228 ~~~~L~~~wN~~~~~~~~~~~~~~~~~~~~p~IIHy~G~~KPW~~~~-------------~~~~~~~f~~~~~~sp 290 (334)
T PRK15171 228 KVKFIDAKYNTQFSLNYELKDSVINPVNDETVFIHYIGPTKPWHSWA-------------DYPVSQYFLKAKEASP 290 (334)
T ss_pred CeEECCHhhCCccchhHHHHhcccccccCCCEEEEECCCCCCCCCCC-------------CCchHHHHHHHHhcCC
Confidence 34599999999865433211111 12246799999999999998654 2367889999998753
No 6
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=99.95 E-value=1e-28 Score=210.19 Aligned_cols=170 Identities=27% Similarity=0.344 Sum_probs=121.8
Q ss_pred hHHHhhhCC---EEEEEeccCCCccccccccCCCCccchhhhhccCccCC-cceEEEEecCeeecCCChhhhCCC----C
Q psy2336 5 PNELLKVFN---FVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQ-YSKCVFLDADVLIVQNCDELFDRE----E 76 (222)
Q Consensus 5 ~~~L~~~~~---~vi~v~~~~~~~~~~~~~~~~~~~~~~~~Kl~i~~L~~-ydrVLyLDaD~iv~~did~LF~~~----~ 76 (222)
++.|+++.. ..|.+.++..+...........+...+|.||+++++++ ++||||||+|++|++||++||+++ .
T Consensus 45 ~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~y~rl~l~~ll~~~~rvlylD~D~lv~~di~~L~~~~~~~~~ 124 (248)
T cd04194 45 KKKLKELLKKYNSSIEFIKIDNDDFKFFPATTDHISYATYYRLLIPDLLPDYDKVLYLDADIIVLGDLSELFDIDLGDNL 124 (248)
T ss_pred HHHHHHHHHhcCCeEEEEEcCHHHHhcCCcccccccHHHHHHHHHHHHhcccCEEEEEeCCEEecCCHHHHhcCCcCCCE
Confidence 556666633 34455555544332211112233346899999999885 999999999999999999999985 3
Q ss_pred cccccCCCC---------------CCcccceEEEEeCCHH----HHHHHHHHHHHcC-CCCCCchHHHHHHHhccccCCC
Q psy2336 77 LSAAPDAGW---------------PDCFNSGVFVFKPSES----TYNALVEFALVNG-SFDGGDQGLLNLYFSDWATADS 136 (222)
Q Consensus 77 ~aav~d~~~---------------~~~fNsGvmli~~~~~----~~~~l~~~~~~~~-~~~~~DQ~iLN~~~~~~~~~~~ 136 (222)
+||++|.+. ..|||||||++|++.. ..+++++.+.+.. .+.++||++||.+|.+ .
T Consensus 125 ~aa~~d~~~~~~~~~~~~~~~~~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~~~~-----~ 199 (248)
T cd04194 125 LAAVRDPFIEQEKKRKRRLGGYDDGSYFNSGVLLINLKKWREENITEKLLELIKEYGGRLIYPDQDILNAVLKD-----K 199 (248)
T ss_pred EEEEecccHHHHHHHHhhcCCCcccceeeecchheeHHHHHHhhhHHHHHHHHHhCCCceeeCChHHHHHHHhC-----C
Confidence 677777431 2699999999999864 4556666666654 4678999999999997 2
Q ss_pred CCCCCcccccccCcccccch------HHHhhCCCcEEEEecCCCCCCCC
Q psy2336 137 SKRLPFIYNMCSTSTYSYLP------ALKQFGSKVKIIHFIGSSKPWLQ 179 (222)
Q Consensus 137 ~~~Lp~~yN~~~~~~~~~~~------~~~~~~~~~~IiHf~g~~KPW~~ 179 (222)
+..||.+||++......... .+....++++||||+|..|||+.
T Consensus 200 ~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 200 ILYLPPRYNFQTGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred eEEcCcccccchhHhHHhhccchhHHHHHHHhcCCEEEEeCCCCCCCCC
Confidence 45999999998764432110 12334688999999999999973
No 7
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.95 E-value=3.2e-28 Score=208.96 Aligned_cols=144 Identities=21% Similarity=0.332 Sum_probs=109.9
Q ss_pred chhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCCCCCcccceEEEEeCCHHHH----HHHHHH
Q psy2336 39 ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAGWPDCFNSGVFVFKPSESTY----NALVEF 109 (222)
Q Consensus 39 ~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~~~~~fNsGvmli~~~~~~~----~~l~~~ 109 (222)
.+|.||.+++++ +++||||||||+||.+||++||+++ .+|||+| +|||||||+|++++.. +++++.
T Consensus 100 ~~y~Rl~ip~llp~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d-----yfNsGV~linl~~wr~~~i~~~~~~~ 174 (257)
T cd06429 100 LNFARFYLPELFPKLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET-----SWNPGVNVVNLTEWRRQNVTETYEKW 174 (257)
T ss_pred HHHHHHHHHHHhhhhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh-----hcccceEEEeHHHHHhccHHHHHHHH
Confidence 589999999986 6899999999999999999999986 3556666 8999999999986554 444555
Q ss_pred HHHcC-C----CCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHhhCCCcEEEEecCCCCCCCCCCCCC
Q psy2336 110 ALVNG-S----FDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIGSSKPWLQHFDST 184 (222)
Q Consensus 110 ~~~~~-~----~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~~IiHf~g~~KPW~~~~~~~ 184 (222)
+.+.. . ...+||++||.+|.+ .+..||.+||++. ..+..... .....+++||||+|..|||+..+
T Consensus 175 ~~~~~~~~~~~~~~~dqd~ln~~~~~-----~~~~L~~~wN~~~-l~~~~~~~-~~~~~~~~IIHy~G~~KPW~~~~--- 244 (257)
T cd06429 175 MELNQEEEVTLWKLITLPPGLIVFYG-----LTSPLDPSWHVRG-LGYNYGIR-PQDIKAAAVLHFNGNMKPWLRTA--- 244 (257)
T ss_pred HHHhhhcccchhhcCCccHHHHHccC-----eeEECChHHcccC-Cccccccc-ccccCCcEEEEECCCCCCcCCCC---
Confidence 54332 1 356799999999987 3469999999973 22221111 12346899999999999998764
Q ss_pred CcccccCCccchHHHHHHHHHHh
Q psy2336 185 TGAILSGDSHLTNFLQLWWDVFV 207 (222)
Q Consensus 185 ~~~~~~~~~~~~~~~~~Ww~~~~ 207 (222)
..++++.||.|+.
T Consensus 245 ----------~~~~~~~w~~yl~ 257 (257)
T cd06429 245 ----------IPSYKELWEKYLS 257 (257)
T ss_pred ----------CChHHHHHHHHhC
Confidence 2478999999873
No 8
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=99.95 E-value=1e-27 Score=208.31 Aligned_cols=162 Identities=18% Similarity=0.198 Sum_probs=115.3
Q ss_pred hhhhhccCccCC--cceEEEEecCeeecCCChhhhCC--C----Cc-ccccCC-------------CC---CCcccceEE
Q psy2336 40 TFTKIHAWRLTQ--YSKCVFLDADVLIVQNCDELFDR--E----EL-SAAPDA-------------GW---PDCFNSGVF 94 (222)
Q Consensus 40 ~~~Kl~i~~L~~--ydrVLyLDaD~iv~~did~LF~~--~----~~-aav~d~-------------~~---~~~fNsGvm 94 (222)
+|.||.++++++ ++||||||||+||.+||++||++ + .+ |++++. .+ ..|||||||
T Consensus 84 ~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~yFNsGVm 163 (280)
T cd06431 84 GLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVI 163 (280)
T ss_pred HHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccchhhhhhhhhhccCCCcccccceeeeee
Confidence 568999999874 89999999999999999999987 2 23 333332 01 149999999
Q ss_pred EEeCCHHHHHHHHH----HHHH----cCCCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHhhCCCcE
Q psy2336 95 VFKPSESTYNALVE----FALV----NGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVK 166 (222)
Q Consensus 95 li~~~~~~~~~l~~----~~~~----~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~~ 166 (222)
|+|+++...+++.+ ...+ .+...++|||+||.++.+.. ..+..||.+||++.+........+. ...+|+
T Consensus 164 linL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~--~~~~~L~~~wN~~~~~~~~~~~~~~-~~~~p~ 240 (280)
T cd06431 164 LLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNP--FLVYQLPCAWNVQLSDHTRSEQCYR-DVSDLK 240 (280)
T ss_pred eeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCc--ceeEECCCccccccCccchHhHhhc-CcCCCE
Confidence 99998655444333 2222 23567899999999998720 1246899999998753321111122 246899
Q ss_pred EEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhhccCCccchh
Q psy2336 167 IIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVVHVHPTLTTE 217 (222)
Q Consensus 167 IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~ 217 (222)
||||+|..|||..++. ..++++.|-.|++.. .+.|..+
T Consensus 241 IIHf~g~~KPW~~~~~------------~~~~~~~~~~~~~~~-~~~l~~~ 278 (280)
T cd06431 241 VIHWNSPKKLRVKNKH------------VEFFRNLYLTFLEYD-GNLLRRE 278 (280)
T ss_pred EEEeCCCCCCCCcCCC------------ChHHHHHHHHHHhcC-chhhhhh
Confidence 9999999999987751 358999999998665 5555443
No 9
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=99.94 E-value=5.3e-28 Score=203.21 Aligned_cols=172 Identities=30% Similarity=0.415 Sum_probs=115.6
Q ss_pred hhHHHhhhCCEEEEEeccCCCccccc------cccCCCCccchhhhhccCcc-CCcceEEEEecCeeecCCChhhhCCC-
Q psy2336 4 APNELLKVFNFVKEVDVFDSRDETNL------RLLSRPDLGITFTKIHAWRL-TQYSKCVFLDADVLIVQNCDELFDRE- 75 (222)
Q Consensus 4 ~~~~L~~~~~~vi~v~~~~~~~~~~~------~~~~~~~~~~~~~Kl~i~~L-~~ydrVLyLDaD~iv~~did~LF~~~- 75 (222)
.++.|+++...+..+.++...+.... ..........+|.|+.++++ .+++||||||+|++|++||++||+++
T Consensus 44 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~i~~ll~~~drilyLD~D~lv~~dl~~lf~~~~ 123 (250)
T PF01501_consen 44 DFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKRHFSPATFARLFIPDLLPDYDRILYLDADTLVLGDLDELFDLDL 123 (250)
T ss_dssp HHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCTCGGGGGGGGGGHHHHSTTSSEEEEE-TTEEESS-SHHHHC---
T ss_pred HHHHHhhhcccccceeeeccchHHhhhhhhhcccccccccHHHHHHhhhHHHHhhcCeEEEEcCCeeeecChhhhhcccc
Confidence 45678888887765555444433221 12223444578999999998 79999999999999999999999975
Q ss_pred ---CcccccC------------------CCCCCcccceEEEEeCCHHHHHHHHHHH----HHcC-CCCCCchHHHHHHHh
Q psy2336 76 ---ELSAAPD------------------AGWPDCFNSGVFVFKPSESTYNALVEFA----LVNG-SFDGGDQGLLNLYFS 129 (222)
Q Consensus 76 ---~~aav~d------------------~~~~~~fNsGvmli~~~~~~~~~l~~~~----~~~~-~~~~~DQ~iLN~~~~ 129 (222)
.++|+.+ .+.+.+||||||+++++....+++.+.+ ...+ ...++||++||.+|.
T Consensus 124 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DQ~~ln~~~~ 203 (250)
T PF01501_consen 124 QGKYLAAVEDESFDNFPNKRFPFSERKQPGNKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGMKLGFPDQDILNIVFY 203 (250)
T ss_dssp TTSSEEEEE----HHHHTSTTSSEEECESTTTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTTT-SSCHHHHHHHHHT
T ss_pred hhhhccccccchhhhhhhcccchhhcccCcccccccCcEEEEeechhhhhhhhhhhhhhhhhcccccCcCchHHHhhhcc
Confidence 2455555 1224899999999999876665555544 3333 467899999999999
Q ss_pred ccccCCCCCCCCcccccccCcccccchHHHhhCCCcEEEEecCCCCCCCCC
Q psy2336 130 DWATADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIGSSKPWLQH 180 (222)
Q Consensus 130 ~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~~IiHf~g~~KPW~~~ 180 (222)
+ .+..||.+||++...............++++||||+|..|||...
T Consensus 204 ~-----~~~~L~~~~N~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 204 G-----NIKPLPCRYNCQPSWYNQSDDYFNPILEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp T-----GEEEEEGGGSEEHHHHHHTHHHHHHHGCC-SEEE--SSS-TTSTT
T ss_pred c-----eeEEECchhccccccccccchhhHhhcCCeEEEEeCCCCcCCCCC
Confidence 6 235999999998754300111223456899999999999999864
No 10
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.92 E-value=4.9e-25 Score=193.99 Aligned_cols=169 Identities=25% Similarity=0.357 Sum_probs=125.1
Q ss_pred HHhhhCCEEEEEeccCCCccccccccCCCCcc-chhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----Ccccc
Q psy2336 7 ELLKVFNFVKEVDVFDSRDETNLRLLSRPDLG-ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAA 80 (222)
Q Consensus 7 ~L~~~~~~vi~v~~~~~~~~~~~~~~~~~~~~-~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav 80 (222)
++.+-|..-+..+.++.+.....+. ...+|. .++.|+.+.++. +++|+||+|+|+||+|+|++||..+ .+|||
T Consensus 52 ~~~~~f~~~i~~~~id~~~~~~~~~-~~~~~s~~v~~R~fiadlf~~~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV 130 (325)
T COG1442 52 ETAEPFKSFIVLEVIDIEPFLDYPP-FTKRFSKMVLVRYFLADLFPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAV 130 (325)
T ss_pred HHHHhhccceeeEEEechhhhcccc-cccchHHHHHHHHHHHHhccccCeEEEEecCEEEcCcHHHHHhcCCCcceEEEE
Confidence 4445566666666666654444221 234555 689999999986 6799999999999999999999996 46788
Q ss_pred cCCC----------------CCCcccceEEEEeCCHHH----HHHHHHHHHH-cCCCCCCchHHHHHHHhccccCCCCCC
Q psy2336 81 PDAG----------------WPDCFNSGVFVFKPSEST----YNALVEFALV-NGSFDGGDQGLLNLYFSDWATADSSKR 139 (222)
Q Consensus 81 ~d~~----------------~~~~fNsGvmli~~~~~~----~~~l~~~~~~-~~~~~~~DQ~iLN~~~~~~~~~~~~~~ 139 (222)
.|.. ...|||||||++|...+. .+++++.+++ +..+..+||++||.+|++ .+..
T Consensus 131 ~D~~~~~~~~~~~~~~~~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~~~~~~~DQdiLN~i~~~-----~~~~ 205 (325)
T COG1442 131 RDVFSHYMKEGALRLEKGDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKENDLLYPDQDILNMIFED-----RVLE 205 (325)
T ss_pred eehhhhhhhhhhhHhhhcccccccCccceeeehHHHHHHhhhHHHHHHHHhccccccCCccccHHHHHHHh-----hhhc
Confidence 7741 137899999999997654 5555666544 346788999999999997 3469
Q ss_pred CCcccccccCcccccch-HHHhhCCCcEEEEecCCCCCCCCCC
Q psy2336 140 LPFIYNMCSTSTYSYLP-ALKQFGSKVKIIHFIGSSKPWLQHF 181 (222)
Q Consensus 140 Lp~~yN~~~~~~~~~~~-~~~~~~~~~~IiHf~g~~KPW~~~~ 181 (222)
||.+||+++....+... .....+.++.|+||+|+.|||+..+
T Consensus 206 L~~~YN~~~~~~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~ 248 (325)
T COG1442 206 LPIRYNAIPYIDSQLKDKYIYPFGDDPVILHYAGPTKPWHSDS 248 (325)
T ss_pred cCcccceeehhhhccchhhhccCCCCceEEEecCCCCCCcCcc
Confidence 99999999865432111 0133478899999999889999886
No 11
>PLN02659 Probable galacturonosyltransferase
Probab=99.89 E-value=1.3e-23 Score=192.21 Aligned_cols=157 Identities=20% Similarity=0.310 Sum_probs=115.9
Q ss_pred CCCCccc--hhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCC----------------CC----
Q psy2336 33 SRPDLGI--TFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDA----------------GW---- 85 (222)
Q Consensus 33 ~~~~~~~--~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~----------------~~---- 85 (222)
.+|.+.+ +|.||.+++++ +.+||||||+|+||.+||++||+++ ..|||.|. ++
T Consensus 322 ~~p~ylS~~nY~RL~IPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~ 401 (534)
T PLN02659 322 LSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPL 401 (534)
T ss_pred CCccceeHHHHHHHHHHHHhhhcCeEEEeeCCEEEcCchHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchh
Confidence 4677665 79999999986 6899999999999999999999996 35566552 11
Q ss_pred --------CCcccceEEEEeCCHHHH----HHHHHHHHHc--CCCCCCchHHH---HHHHhccccCCCCCCCCccccccc
Q psy2336 86 --------PDCFNSGVFVFKPSESTY----NALVEFALVN--GSFDGGDQGLL---NLYFSDWATADSSKRLPFIYNMCS 148 (222)
Q Consensus 86 --------~~~fNsGvmli~~~~~~~----~~l~~~~~~~--~~~~~~DQ~iL---N~~~~~~~~~~~~~~Lp~~yN~~~ 148 (222)
..|||||||+||++++.. +++++++.++ ......|||+| |.+|.+ .+..|+.+||+..
T Consensus 402 i~~yFn~~~cYfNsGVlLINLk~WRe~nITek~l~~l~~n~~~~l~l~DQdaLp~~LivF~g-----~v~~LD~rWN~~g 476 (534)
T PLN02659 402 IAKNFDPNECAWAYGMNIFDLEAWRKTNISSTYHHWLEENLKSDLSLWQLGTLPPGLIAFHG-----HVHVIDPFWHMLG 476 (534)
T ss_pred hhhccCccccceecceeEeeHHHHHhcChHHHHHHHHHhcccccccccccccchHHHHHhcC-----CEEECChhheecC
Confidence 137889999999987654 4555555544 23566799999 577886 3469999999854
Q ss_pred CcccccchHHHhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhhc
Q psy2336 149 TSTYSYLPALKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVVH 209 (222)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~~ 209 (222)
..+.....++ ..+++.||||+|..|||...+ ..++++.|-.|++..
T Consensus 477 -Lg~~~~~~~~-~i~~paIIHYnG~~KPW~~~~-------------~~~yr~~W~kYl~~s 522 (534)
T PLN02659 477 -LGYQENTSLA-DAESAGVVHFNGRAKPWLDIA-------------FPQLRPLWAKYIDSS 522 (534)
T ss_pred -Cccccccccc-ccCCcEEEEECCCCCcccccc-------------CCcchhHHHHHhccC
Confidence 2332211222 247899999999999999775 347888898887543
No 12
>PLN02867 Probable galacturonosyltransferase
Probab=99.89 E-value=1e-23 Score=193.62 Aligned_cols=156 Identities=19% Similarity=0.280 Sum_probs=114.6
Q ss_pred CCCCccc--hhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCC--------C-------------
Q psy2336 33 SRPDLGI--TFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDA--------G------------- 84 (222)
Q Consensus 33 ~~~~~~~--~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~--------~------------- 84 (222)
.+|.+.+ +|.||.+++++ +++||||||+|+||.+||++||+++ .+|||.|. +
T Consensus 323 ~~pkylS~lnYlRflIPeLLP~LdKVLYLD~DVVVqgDLseLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~YlNfsnp~ 402 (535)
T PLN02867 323 LSPSCLSLLNHLRIYIPELFPDLNKIVFLDDDVVVQHDLSSLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYLNFSHPL 402 (535)
T ss_pred cChhhhhHHHHHHHHHHHHhhccCeEEEecCCEEEcCchHHHHhCcCCCCeEEEEeccccccccccchhhhhhccccchh
Confidence 4677765 79999999987 6899999999999999999999996 36777541 0
Q ss_pred ----C---CCcccceEEEEeCCHHHHHHHHH----HHHHcC--CCCCCchHHHHH---HHhccccCCCCCCCCccccccc
Q psy2336 85 ----W---PDCFNSGVFVFKPSESTYNALVE----FALVNG--SFDGGDQGLLNL---YFSDWATADSSKRLPFIYNMCS 148 (222)
Q Consensus 85 ----~---~~~fNsGvmli~~~~~~~~~l~~----~~~~~~--~~~~~DQ~iLN~---~~~~~~~~~~~~~Lp~~yN~~~ 148 (222)
. ..||||||||||+.++..+++.+ +++.+. .....|||.||. +|.+ .+..||.+||+.
T Consensus 403 i~~~~~p~~cYFNSGVmLINL~~WRe~nITek~~~~Le~n~~~~~~l~dqd~LN~~LlvF~g-----~v~~LD~rWNv~- 476 (535)
T PLN02867 403 ISSNLDQERCAWLYGMNVFDLKAWRRTNITEAYHKWLKLSLNSGLQLWQPGALPPALLAFKG-----HVHPIDPSWHVA- 476 (535)
T ss_pred hhccCCCCCcceecceeeeeHHHHHHhcHHHHHHHHHHhchhcccccccccccchHHHHhcC-----cEEECChhhccc-
Confidence 0 14789999999998766555544 444432 245679999996 7776 346999999984
Q ss_pred CcccccchHHHhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHh
Q psy2336 149 TSTYSYLPALKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFV 207 (222)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~ 207 (222)
+..+......++..++++||||+|..|||...+ ..++++.|-.|++
T Consensus 477 gLgy~~~~~~~~~i~~paIIHYnG~~KPW~e~~-------------~~~yR~~W~kyl~ 522 (535)
T PLN02867 477 GLGSRPPEVPREILESAAVLHFSGPAKPWLEIG-------------FPEVRSLWYRHVN 522 (535)
T ss_pred CCCcccccchhhhcCCcEEEEECCCCCcccccC-------------CCchhHHHHHhcC
Confidence 333322111233457899999999999999875 3478888966653
No 13
>PLN02769 Probable galacturonosyltransferase
Probab=99.88 E-value=8.4e-23 Score=190.23 Aligned_cols=155 Identities=19% Similarity=0.244 Sum_probs=111.8
Q ss_pred CCCcc--chhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCC--------------C---CCcc
Q psy2336 34 RPDLG--ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG--------------W---PDCF 89 (222)
Q Consensus 34 ~~~~~--~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~--------------~---~~~f 89 (222)
+|.+. .++.||+|++++ +.+||||||+|+||.+||++||+++ .+|||.+.+ + ..+|
T Consensus 431 ~~eyiS~~nh~RfyIPELLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~rl~~~~~yl~~~~F~~~~CyF 510 (629)
T PLN02769 431 RTEYLSVFSHSHFLLPEIFKKLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNGAVQFCGVRLGQLKNYLGDTNFDTNSCAW 510 (629)
T ss_pred CcccccHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhcCCCCCCeEEEehhhhhhhhhhhhhhcccCCCcccccc
Confidence 55555 478999999987 5799999999999999999999986 356665521 1 1478
Q ss_pred cceEEEEeCCHHHHHHHHH----HHHHc---C--CCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHh
Q psy2336 90 NSGVFVFKPSESTYNALVE----FALVN---G--SFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQ 160 (222)
Q Consensus 90 NsGvmli~~~~~~~~~l~~----~~~~~---~--~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~ 160 (222)
||||||||+.++..+++.+ ++++. + ....++|+++|.+|.+ .+..||.+||++... +.+.-. ..
T Consensus 511 NSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~lnlvF~g-----~v~~LD~rWNv~gLG-~~~~i~-~~ 583 (629)
T PLN02769 511 MSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASLLTFQD-----LIYPLDDRWVLSGLG-HDYGID-EQ 583 (629)
T ss_pred ccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHHHHhcC-----eEEECCHHHcccccc-cccccc-cc
Confidence 9999999998765544433 33321 1 2344688888889987 346999999986421 111101 12
Q ss_pred hCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhh
Q psy2336 161 FGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVV 208 (222)
Q Consensus 161 ~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 208 (222)
...+++||||+|..|||...+ ...+++.||.|+..
T Consensus 584 ~i~~paIIHYnG~~KPW~e~~-------------i~~yr~~W~kYl~~ 618 (629)
T PLN02769 584 AIKKAAVLHYNGNMKPWLELG-------------IPKYKKYWKRFLNR 618 (629)
T ss_pred ccCCcEEEEECCCCCCccCCC-------------CChHHHHHHHHhcc
Confidence 357899999999999998764 23789999999864
No 14
>PLN02829 Probable galacturonosyltransferase
Probab=99.87 E-value=1.6e-22 Score=187.57 Aligned_cols=156 Identities=18% Similarity=0.279 Sum_probs=113.3
Q ss_pred CCCCcc--chhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCC-----------C---------
Q psy2336 33 SRPDLG--ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG-----------W--------- 85 (222)
Q Consensus 33 ~~~~~~--~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~-----------~--------- 85 (222)
.+|.+. .+|.||++++++ +.+||||||+|+||.+||++||+++ ..|||.+++ +
T Consensus 435 r~p~ylS~lnY~RfyLPeLLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviAAVedc~~~f~r~~~~l~fs~p~i~~~F 514 (639)
T PLN02829 435 RNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSIDLKGNVNGAVETCGESFHRFDRYLNFSNPLISKNF 514 (639)
T ss_pred CCcchhhHHHHHHHHHHHHhcccCeEEEEeCCEEeCCChHHHHhCCCCCceEEEeccchhhhhhhhhhhhccchHhhhcc
Confidence 356554 479999999987 5899999999999999999999986 345665421 1
Q ss_pred ---CCcccceEEEEeCCHHHHHHHHH----HHHHcCCCCCCchHHHHHH---HhccccCCCCCCCCcccccccCcccccc
Q psy2336 86 ---PDCFNSGVFVFKPSESTYNALVE----FALVNGSFDGGDQGLLNLY---FSDWATADSSKRLPFIYNMCSTSTYSYL 155 (222)
Q Consensus 86 ---~~~fNsGvmli~~~~~~~~~l~~----~~~~~~~~~~~DQ~iLN~~---~~~~~~~~~~~~Lp~~yN~~~~~~~~~~ 155 (222)
+.+||+||||||+..+..+++.+ ++..+..-...||+.||.. |.+ .+..|+.+||..... +. .
T Consensus 515 n~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLPp~Ll~F~g-----~i~~LD~rWNv~GLG-y~-~ 587 (639)
T PLN02829 515 DPHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLPPGLITFWK-----RTYPLDRSWHVLGLG-YN-P 587 (639)
T ss_pred CCcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCChHHHHhcC-----ceEecChhheecCCC-CC-c
Confidence 25799999999998766555444 4433333345789999975 354 356999999997642 21 1
Q ss_pred hHHHhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhh
Q psy2336 156 PALKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVV 208 (222)
Q Consensus 156 ~~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 208 (222)
........++.||||+|..|||...+ ...+++.|..|...
T Consensus 588 ~v~~~~i~~aaIIHynG~~KPWle~~-------------i~~yr~lW~kYl~~ 627 (639)
T PLN02829 588 NVNQRDIERAAVIHYNGNMKPWLEIG-------------IPKYRNYWSKYVDY 627 (639)
T ss_pred ccchhcccCCeEEEECCCCCccccCC-------------cccchHHHHHHHhc
Confidence 11223467899999999999998774 34688899888743
No 15
>PLN02523 galacturonosyltransferase
Probab=99.87 E-value=1.3e-22 Score=186.25 Aligned_cols=149 Identities=21% Similarity=0.329 Sum_probs=110.9
Q ss_pred chhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCC-----------C--C---Ccccc------
Q psy2336 39 ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG-----------W--P---DCFNS------ 91 (222)
Q Consensus 39 ~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~-----------~--~---~~fNs------ 91 (222)
.+|.||+|++++ +.+||||||+|+||.+||++||+++ ..+||.|.. + | .+||+
T Consensus 363 ~ny~Rf~IPeLLP~ldKVLYLD~DVVVq~DLseLw~iDL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yFNs~aC~wn 442 (559)
T PLN02523 363 LNHLRFYLPEMYPKLHRILFLDDDVVVQKDLTGLWKIDMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKFNPKACAWA 442 (559)
T ss_pred HHHHHHHHHHHhcccCeEEEEeCCEEecCCHHHHHhCcCCCceEEEehhhhhHHHHHHHhhcccchhhhhCcCCCccccc
Confidence 579999999986 6899999999999999999999986 256666531 1 1 35665
Q ss_pred -eEEEEeCCHHHHHHHHHHHH----HcCCCCCCchHHHH---HHHhccccCCCCCCCCcccccccCcccccchH-HHhhC
Q psy2336 92 -GVFVFKPSESTYNALVEFAL----VNGSFDGGDQGLLN---LYFSDWATADSSKRLPFIYNMCSTSTYSYLPA-LKQFG 162 (222)
Q Consensus 92 -Gvmli~~~~~~~~~l~~~~~----~~~~~~~~DQ~iLN---~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~-~~~~~ 162 (222)
||||||+.++..+++.+... .+......||+.|| .+|.+ .+..|+.+||.+... + .+. ..+..
T Consensus 443 sGVmlINL~~WRe~nITek~~~w~~ln~~~~l~DqdaLpp~LivF~g-----ri~~LD~rWNvlglG-y--~~~i~~~~i 514 (559)
T PLN02523 443 YGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLGTLPPGLITFYS-----TTKPLDKSWHVLGLG-Y--NPSISMDEI 514 (559)
T ss_pred CCcEEEeHHHHHHhchHHHHHHHHHhccccccccccccchHHHHhcC-----ceEecCchhhccCCc-c--CCCcccccc
Confidence 99999999877777666543 12345678999996 67776 346999999986532 2 111 12234
Q ss_pred CCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhh
Q psy2336 163 SKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVV 208 (222)
Q Consensus 163 ~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 208 (222)
+++.||||+|..|||...+ ...+++.||.|+..
T Consensus 515 ~~paIIHYnG~~KPWle~~-------------i~~yr~~W~kYl~~ 547 (559)
T PLN02523 515 RNAAVIHFNGNMKPWLDIA-------------MNQFKPLWTKYVDY 547 (559)
T ss_pred CCCEEEEECCCCCccccCC-------------CCcchHHHHHHHcc
Confidence 7899999999999998653 24678999999753
No 16
>PLN02870 Probable galacturonosyltransferase
Probab=99.87 E-value=1.2e-22 Score=185.96 Aligned_cols=154 Identities=21% Similarity=0.282 Sum_probs=110.4
Q ss_pred CCCccc--hhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCC----------C-----------
Q psy2336 34 RPDLGI--TFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG----------W----------- 85 (222)
Q Consensus 34 ~~~~~~--~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~----------~----------- 85 (222)
+|.+.+ +|.||++++++ +.+||||||+|+||.+||++||+++ ..|||.|.+ .
T Consensus 322 ~p~ylS~lny~Rl~LPelLP~LdKVLYLD~DVVVqgDLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfNfs~p~i 401 (533)
T PLN02870 322 SPKYISLLNHLRIYLPELFPNLDKVVFLDDDVVIQRDLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFNFSHPLI 401 (533)
T ss_pred CccccCHHHHHHHHHHHHhhhcCeEEEEeCCEEecCcHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcccccchh
Confidence 566654 79999999986 5899999999999999999999996 355666520 0
Q ss_pred -------CCcccceEEEEeCCHHHHH----HHHHHHHHc--CCCCCCchHHH---HHHHhccccCCCCCCCCcccccccC
Q psy2336 86 -------PDCFNSGVFVFKPSESTYN----ALVEFALVN--GSFDGGDQGLL---NLYFSDWATADSSKRLPFIYNMCST 149 (222)
Q Consensus 86 -------~~~fNsGvmli~~~~~~~~----~l~~~~~~~--~~~~~~DQ~iL---N~~~~~~~~~~~~~~Lp~~yN~~~~ 149 (222)
..|||||||+||++++..+ ++.+++.++ ..+.+.|||.| |.+|.+ .+..|+.+||+...
T Consensus 402 ~~~fd~~~cyfNSGVlLINL~~WRe~nITek~~~~l~~n~~~~l~l~DQdaLp~~livf~g-----~v~~LD~rWN~~gL 476 (533)
T PLN02870 402 AKNLDPEECAWAYGMNIFDLRAWRKTNIRETYHSWLKENLKSNLTMWKLGTLPPALIAFKG-----HVHPIDPSWHMLGL 476 (533)
T ss_pred hcccCcccceeeccchhccHHHHHHcChHHHHHHHHHhhhhcCceecccccccHhHHHhcC-----ceEECChHHhcCCC
Confidence 1367799999999876544 445555443 24567899999 577876 34699999998542
Q ss_pred cccccchHHHhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHh
Q psy2336 150 STYSYLPALKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFV 207 (222)
Q Consensus 150 ~~~~~~~~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~ 207 (222)
.+.. .......++++||||+|..|||...+ ...++..|-.|.+
T Consensus 477 -gy~~-~~~~~~i~~aaIIHY~G~~KPW~~~~-------------~~~yr~~W~kYl~ 519 (533)
T PLN02870 477 -GYQS-KTNIESVKKAAVIHYNGQSKPWLEIG-------------FEHLRPFWTKYVN 519 (533)
T ss_pred -CCcc-cccccccCCcEEEEECCCCCCccccC-------------ccchhHHHHHHHc
Confidence 2221 11223467899999999999998654 2346566666653
No 17
>PLN02742 Probable galacturonosyltransferase
Probab=99.86 E-value=6.9e-22 Score=181.25 Aligned_cols=156 Identities=19% Similarity=0.227 Sum_probs=114.3
Q ss_pred CCCCcc--chhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCC-----------C---------
Q psy2336 33 SRPDLG--ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG-----------W--------- 85 (222)
Q Consensus 33 ~~~~~~--~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~-----------~--------- 85 (222)
.+|.+. .+|.||.+++++ +.+||||||+|+||.+||++||+++ .+|||.|++ +
T Consensus 331 r~p~y~s~~~y~R~~lP~llp~l~KvlYLD~DvVV~~DL~eL~~~DL~~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f 410 (534)
T PLN02742 331 RNPKYLSMLNHLRFYIPEIYPALEKVVFLDDDVVVQKDLTPLFSIDLHGNVNGAVETCLETFHRYHKYLNFSHPLISSHF 410 (534)
T ss_pred cCcccccHHHHHHHHHHHHhhccCeEEEEeCCEEecCChHHHhcCCCCCCEEEEeCchhhhhhhhhhhhcccchhhhccC
Confidence 346555 479999999986 5899999999999999999999996 356666531 1
Q ss_pred ---CCcccceEEEEeCCHHHHHHHHHHH---H-HcCCCCCCchHHHHHH---HhccccCCCCCCCCcccccccCcccccc
Q psy2336 86 ---PDCFNSGVFVFKPSESTYNALVEFA---L-VNGSFDGGDQGLLNLY---FSDWATADSSKRLPFIYNMCSTSTYSYL 155 (222)
Q Consensus 86 ---~~~fNsGvmli~~~~~~~~~l~~~~---~-~~~~~~~~DQ~iLN~~---~~~~~~~~~~~~Lp~~yN~~~~~~~~~~ 155 (222)
..+||+||||||+.++..+++.+.+ . .+......||+.||.. |.+ .+..|+.+||.... .+...
T Consensus 411 ~~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLpp~LLaF~g-----~~~~LD~rWNv~gL-G~~~~ 484 (534)
T PLN02742 411 DPDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLPPGLLTFYG-----LTEPLDRRWHVLGL-GYDTN 484 (534)
T ss_pred CCCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccchHHHHHcC-----cceecChhheeccc-ccccc
Confidence 1579999999999887666655533 2 2344566799999964 765 34699999998642 22111
Q ss_pred hHHHhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhh
Q psy2336 156 PALKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVV 208 (222)
Q Consensus 156 ~~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 208 (222)
-. .....++.||||+|..|||...+ ...+++.|+.|+..
T Consensus 485 v~-~~~i~~aaILHynG~~KPWl~~~-------------i~~yr~~W~kYl~~ 523 (534)
T PLN02742 485 ID-PRLIESAAVLHFNGNMKPWLKLA-------------IERYKPLWERYVNY 523 (534)
T ss_pred cc-hhhccCCeEEEECCCCCcccccC-------------CcccchHHHHHHcc
Confidence 01 12467899999999999999774 23577899999754
No 18
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=99.86 E-value=6.8e-22 Score=183.18 Aligned_cols=155 Identities=15% Similarity=0.226 Sum_probs=114.3
Q ss_pred CCCCccc--hhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCC-----------CC---------
Q psy2336 33 SRPDLGI--TFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDA-----------GW--------- 85 (222)
Q Consensus 33 ~~~~~~~--~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~-----------~~--------- 85 (222)
.+|.+.+ +|.||++++++ +.+||||||+|+||.+||++||+++ ..|||.+. ++
T Consensus 453 r~p~ylS~lnY~Rf~LPelLp~l~KVLYLD~DVVV~gDLseLw~iDL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yF 532 (657)
T PLN02910 453 RNPKYLSMLNHLRFYLPEVYPKLEKILFLDDDIVVQKDLTPLWSIDMQGMVNGAVETCKESFHRFDKYLNFSNPKISENF 532 (657)
T ss_pred CCcchhhHHHHHHHHHHHHhhhcCeEEEEeCCEEecCchHHHHhCCcCCceEEEecccchhhhhhhhhhccCChhhhhcc
Confidence 4576654 79999999987 5899999999999999999999986 24555442 11
Q ss_pred ---CCcccceEEEEeCCHHHHHHHHHH---HHH-cCCCCCCchHHHH---HHHhccccCCCCCCCCcccccccCcccccc
Q psy2336 86 ---PDCFNSGVFVFKPSESTYNALVEF---ALV-NGSFDGGDQGLLN---LYFSDWATADSSKRLPFIYNMCSTSTYSYL 155 (222)
Q Consensus 86 ---~~~fNsGvmli~~~~~~~~~l~~~---~~~-~~~~~~~DQ~iLN---~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~ 155 (222)
+.+||+||||||++++..+++.+. +.+ +......||+.|| .+|.+ .+..|+++||..... +. .
T Consensus 533 Ns~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqgsLPpgLLvF~g-----~i~pLD~rWNv~GLG-yd-~ 605 (657)
T PLN02910 533 DPNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLGSLPPGLITFYN-----LTYPLDRSWHVLGLG-YD-P 605 (657)
T ss_pred CCCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccCCCChHHHHHhC-----ceeecCchheecCCC-CC-c
Confidence 146677999999998776666553 333 3456678999999 57776 346999999987532 21 1
Q ss_pred hHHHhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHh
Q psy2336 156 PALKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFV 207 (222)
Q Consensus 156 ~~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~ 207 (222)
........++.||||+|..|||...+ ...+++.|-.|+.
T Consensus 606 ~v~~~~i~~AAVLHynG~~KPWl~l~-------------i~~Yr~~W~kYl~ 644 (657)
T PLN02910 606 ALNQTEIENAAVVHYNGNYKPWLDLA-------------IAKYKPYWSRYVQ 644 (657)
T ss_pred ccccccccCcEEEEeCCCCCcccccC-------------cccchHHHHHHcc
Confidence 11123467899999999999998774 3478888988875
No 19
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=99.86 E-value=2.4e-21 Score=169.03 Aligned_cols=163 Identities=19% Similarity=0.277 Sum_probs=109.0
Q ss_pred chhhhhccCccC-CcceEEEEecCeeecCCChhhhCC--C----Ccccc-cCC-----CC-------C----CcccceEE
Q psy2336 39 ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDR--E----ELSAA-PDA-----GW-------P----DCFNSGVF 94 (222)
Q Consensus 39 ~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~--~----~~aav-~d~-----~~-------~----~~fNsGvm 94 (222)
.+|.||.+++++ +.|||||||||+||++||++||++ + .++|+ ++. +| + .+||||||
T Consensus 83 ~~y~RL~ip~lLp~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~~~~~~~~~~~~~~~~~gFNSGVm 162 (304)
T cd06430 83 CAAQRLFLPSLLPDVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPNIGWYNRFARHPYYGKTGVNSGVM 162 (304)
T ss_pred HHHHHHHHHHHhhhhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccchhhhhhhcccCccccccccccee
Confidence 569999999976 678999999999999999999987 3 24443 431 12 1 46999999
Q ss_pred EEeCCHHHH---------------HHHHHHHHHc-CCCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHH
Q psy2336 95 VFKPSESTY---------------NALVEFALVN-GSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPAL 158 (222)
Q Consensus 95 li~~~~~~~---------------~~l~~~~~~~-~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~ 158 (222)
++|+++... +++++.++++ ..+.++|||+||.+|.+.. +.++.||.+||+++... .+...+
T Consensus 163 LmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~DQDiLN~v~~~~p--~~~~~Lp~~wN~~~d~~-~y~~~~ 239 (304)
T cd06430 163 LMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYKLKITWGDQDLINIIFHHNP--EMLYVFPCHWNYRPDHC-MYGSNC 239 (304)
T ss_pred eeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcccCCCCCCHHHHHHHHcCCC--CeEEEcCccccCCccce-eecccc
Confidence 999976443 3455666554 3577899999999999721 23568999999888432 121112
Q ss_pred H-hhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhhccCCccchhhh
Q psy2336 159 K-QFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVVHVHPTLTTEMI 219 (222)
Q Consensus 159 ~-~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~~~~~~~~~~~~ 219 (222)
+ ...++++|||.++..| ... . ...++.+.-.+.+=.....+.++|+
T Consensus 240 ~~~~~~~~~~~H~n~~~~---~~~-~-----------~~~f~~~~~~~~~~~~g~~~~~~~~ 286 (304)
T cd06430 240 KAAEEEGVFILHGNRGVY---HSD-K-----------QPAFRAVYEAIREYTFGDDLHQSLL 286 (304)
T ss_pred cccccccceEEEcCCCCC---CCc-c-----------chHHHHHHHHHHhcccccchHHHhH
Confidence 2 1246899999997555 221 1 2245555544443334555655554
No 20
>PLN02718 Probable galacturonosyltransferase
Probab=99.85 E-value=2.2e-21 Score=180.05 Aligned_cols=149 Identities=16% Similarity=0.202 Sum_probs=109.1
Q ss_pred chhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCC--------------C------------CC
Q psy2336 39 ITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG--------------W------------PD 87 (222)
Q Consensus 39 ~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~--------------~------------~~ 87 (222)
.+|+||.+++++ +.+||||||+|+||.+||++||+++ .+|||.|++ + ..
T Consensus 404 ~~y~Rl~ipellp~l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~~lnfs~p~i~~~fn~~~C 483 (603)
T PLN02718 404 LNHARFYLPDIFPGLNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDTFINFSDPWVAKKFDPKAC 483 (603)
T ss_pred HHHHHHHHHHHhcccCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhhhhhccchhhhcccCCCcc
Confidence 589999999986 6899999999999999999999986 245555421 1 14
Q ss_pred cccceEEEEeCCHHHHHHH----HHHHHHcCCCCCCchHHHH---HHHhccccCCCCCCCCcccccccCcccccchHHHh
Q psy2336 88 CFNSGVFVFKPSESTYNAL----VEFALVNGSFDGGDQGLLN---LYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQ 160 (222)
Q Consensus 88 ~fNsGvmli~~~~~~~~~l----~~~~~~~~~~~~~DQ~iLN---~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~ 160 (222)
+||+||||||+.++..+++ .+++..+......||+.|| .+|.+ .+..||.+||.... .+...-. ..
T Consensus 484 yfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~g-----ri~~LD~rWNv~gL-G~~~~i~-~~ 556 (603)
T PLN02718 484 TWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYN-----QTVALDKRWHVLGL-GHESGVG-AS 556 (603)
T ss_pred ccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcC-----ceeecChHHhccCc-ccccccc-cc
Confidence 6889999999987665544 4455544444567899887 78876 34699999998753 2211101 12
Q ss_pred hCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHh
Q psy2336 161 FGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFV 207 (222)
Q Consensus 161 ~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~ 207 (222)
...++.||||+|..|||...+ ...+++.|-.|.+
T Consensus 557 ~i~~aaIIHYnG~~KPWle~~-------------i~~yr~~W~k~v~ 590 (603)
T PLN02718 557 DIEQAAVIHYDGVMKPWLDIG-------------IGKYKRYWNIHVP 590 (603)
T ss_pred ccCCCEEEEECCCCCccccCC-------------hhhHHHHHHhhcC
Confidence 357899999999999999774 3477778877753
No 21
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=99.79 E-value=1.4e-19 Score=154.88 Aligned_cols=124 Identities=21% Similarity=0.210 Sum_probs=90.8
Q ss_pred chhhhhccCccC--CcceEEEEecCeeecCCChhhhCCC----CcccccCCC---------------C----C--Ccccc
Q psy2336 39 ITFTKIHAWRLT--QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG---------------W----P--DCFNS 91 (222)
Q Consensus 39 ~~~~Kl~i~~L~--~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~---------------~----~--~~fNs 91 (222)
.+|.+|.+..++ +++||||||+|+||.+||++||+++ .+|||++.+ + + .||||
T Consensus 81 ~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~~~~~~~~~~~~~~~~l~~~~YfNS 160 (248)
T cd06432 81 WGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKEMDGFRFWKQGYWKSHLRGRPYHIS 160 (248)
T ss_pred HHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchhcccchhhhhhhhhhhcCCCCccce
Confidence 357777777654 4899999999999999999999986 355665421 1 1 38999
Q ss_pred eEEEEeCCHHHHHHHHHHHH-------Hc-CCCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHhhCC
Q psy2336 92 GVFVFKPSESTYNALVEFAL-------VN-GSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGS 163 (222)
Q Consensus 92 Gvmli~~~~~~~~~l~~~~~-------~~-~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~ 163 (222)
|||++|+.+++.+++.+.+. ++ ..+.++|||+||.++.+. .+..||.+||++.... .++.++
T Consensus 161 GVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l~~~DQDiLN~v~~~~----~i~~Lp~~w~~~~~~~------~~~~~~ 230 (248)
T cd06432 161 ALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSLANLDQDLPNNMQHQV----PIFSLPQEWLWCETWC------SDESKK 230 (248)
T ss_pred eeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCccccCCchhhHHHhccC----CeEECChHHHHHHHHh------cccccC
Confidence 99999998766555544222 22 356789999999999751 2469999999864311 133478
Q ss_pred CcEEEEecC
Q psy2336 164 KVKIIHFIG 172 (222)
Q Consensus 164 ~~~IiHf~g 172 (222)
.+++|||+.
T Consensus 231 ~~~~~~~~~ 239 (248)
T cd06432 231 KAKTIDLCN 239 (248)
T ss_pred ccceeeccc
Confidence 899999976
No 22
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.63 E-value=9.8e-17 Score=137.81 Aligned_cols=153 Identities=31% Similarity=0.404 Sum_probs=105.8
Q ss_pred cCCCCccchhhhhccCccCCcceEEEEecCeeecCCChhhhCCC--CcccccCC--------------------------
Q psy2336 32 LSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE--ELSAAPDA-------------------------- 83 (222)
Q Consensus 32 ~~~~~~~~~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~--~~aav~d~-------------------------- 83 (222)
....+|..+|+||.+|+.++||||+|||+|.||++|+|+||+.| .++|.+|.
T Consensus 148 ~~~~rw~~mftKLrVfeqtEyDRvifLDsDaivlknmDklFd~Pvyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg 227 (368)
T COG5597 148 PDFHRWLDMFTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYG 227 (368)
T ss_pred cCcCcHHHHhHHHHhhhhhhhceEEEeccchHHhhhhHHHhcchhhhhccCCchhhCHHHhcCCCCccceeecHHHHhhc
Confidence 34678889999999999999999999999999999999999987 45544431
Q ss_pred ------------------C--------CCCcccceEEEEeCCHHHHHHHHHHHHHc--CCCCCCchHHHHHHHhc--ccc
Q psy2336 84 ------------------G--------WPDCFNSGVFVFKPSESTYNALVEFALVN--GSFDGGDQGLLNLYFSD--WAT 133 (222)
Q Consensus 84 ------------------~--------~~~~fNsGvmli~~~~~~~~~l~~~~~~~--~~~~~~DQ~iLN~~~~~--~~~ 133 (222)
+ ++.+||||+|+++|+...+.++....-.. ..-+.-+|.++|..++. |.
T Consensus 228 ~~r~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~riv~~alPklydda~mmeqsllnlaYn~~g~F- 306 (368)
T COG5597 228 KMRAALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLRIVWFALPKLYDDADMMEQSLLNLAYNYEGFF- 306 (368)
T ss_pred ccHhhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHhhhccC-
Confidence 0 01579999999999999888887766211 11123379999998885 32
Q ss_pred CCCCCCCCcccccccCcccccchHHHhhCCCcEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHH-HHHhhc
Q psy2336 134 ADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWW-DVFVVH 209 (222)
Q Consensus 134 ~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww-~~~~~~ 209 (222)
.|.++...||- . +. .+ .+ ..-.+.+|+ |||+..+..- -+.....|| +...++
T Consensus 307 --Pwerld~~yNG---~-wa--~~-nd-lPylka~Hg----K~W~y~g~~f----------p~i~~~ew~~daf~E~ 359 (368)
T COG5597 307 --PWERLDPRYNG---Y-WA--DA-ND-LPYLKAWHG----KPWFYTGEQF----------PDIAGLEWPQDAFTEP 359 (368)
T ss_pred --chhhcCccccc---c-cc--cc-cc-cchHHHhhc----CcCCCCcccC----------hhhhcCcChhhhhhcH
Confidence 46789999992 1 11 10 00 122355664 9999875321 124555788 544443
No 23
>KOG1950|consensus
Probab=98.87 E-value=5e-09 Score=94.60 Aligned_cols=164 Identities=32% Similarity=0.441 Sum_probs=111.7
Q ss_pred hhhhhccCccCCcceEEEEecCeeecCCChhhhC-CCCcccccCCCCCCcccceEEEEeCCHHHHHHHHHHHHHcCCCCC
Q psy2336 40 TFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFD-REELSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFALVNGSFDG 118 (222)
Q Consensus 40 ~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~-~~~~aav~d~~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~ 118 (222)
.+.|++.|.+..+++++.+|+|..++.+.+.+|. .+.+.+++- .+..||+|.|++.|+...++.+.+.......+.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~f~~~~~~~~~~~--l~~~~n~~~~v~~ps~~~~~~~~~~~~~~~~~~~ 229 (369)
T KOG1950|consen 152 NYAKLYMFQLDFYSKLVKIDADDCILKNDDLLFSNWPDLFATNI--LPLIFNSGLLVFEPSLCNYKDLMEFSEEFESYNG 229 (369)
T ss_pred cccccceeeecccccceEEeccchhcCChhhhhhhchhhccCCC--ccceeccCccccCCCccchhhHHHhhcccCCCCC
Confidence 5667777777777777777777777777777776 445554433 2345999999999998888887777766667889
Q ss_pred CchHHHHHHHhccccCCCCCCCCcccccccCcccccch--HHHh-hCCCcEEEEecCCCCCCCCCCCCCCcccc--cCCc
Q psy2336 119 GDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLP--ALKQ-FGSKVKIIHFIGSSKPWLQHFDSTTGAIL--SGDS 193 (222)
Q Consensus 119 ~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~--~~~~-~~~~~~IiHf~g~~KPW~~~~~~~~~~~~--~~~~ 193 (222)
++|+++|.+|..+. ...|..+|+.....+++.. .+.. .......+||.|..|||.+.....+.... ..+.
T Consensus 230 ~~q~~l~~~f~~~~-----~~~~~~~n~~~~~~~~~p~~~~l~~~~~~~~~~~~y~~~~~p~~~~~~~~~n~~~~~~~~~ 304 (369)
T KOG1950|consen 230 ADQGFLHLIFSWIP-----DRPPPSVNLNLAKLWRHPKKNDLSRASSVLRYALHYLGANKPELCYRDFDCNLDGDEFPRK 304 (369)
T ss_pred ccchhhHHHhhccc-----CCCcccccccccccccCccccchhhcccccchhhhccccCCCCccccCcccccccccccch
Confidence 99999999999753 2778889987765554321 1111 12233456999976898877655442210 1122
Q ss_pred cchHHHHHHHHHHhhcc
Q psy2336 194 HLTNFLQLWWDVFVVHV 210 (222)
Q Consensus 194 ~~~~~~~~Ww~~~~~~~ 210 (222)
.....++.||..|+.+-
T Consensus 305 ~~~~~~~~~w~~~~~~~ 321 (369)
T KOG1950|consen 305 DIDSLHKKWWDVYDDMS 321 (369)
T ss_pred hHHHHHhccchhhccCc
Confidence 34567888999997764
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=98.40 E-value=2.4e-06 Score=70.91 Aligned_cols=167 Identities=17% Similarity=0.101 Sum_probs=93.3
Q ss_pred hhHHHhhhCCEEEEEeccCCCccccccccCCCCcc-chhhhhccCc-cC-CcceEEEEecCeeecCCChhhhCCC--Ccc
Q psy2336 4 APNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLG-ITFTKIHAWR-LT-QYSKCVFLDADVLIVQNCDELFDRE--ELS 78 (222)
Q Consensus 4 ~~~~L~~~~~~vi~v~~~~~~~~~~~~~~~~~~~~-~~~~Kl~i~~-L~-~ydrVLyLDaD~iv~~did~LF~~~--~~a 78 (222)
+.+.|++.+..+..+................+.+. .++.|..+-. ++ ..-.|+++|+|++.++|+.++|+.+ ++.
T Consensus 15 t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~L~~G~~vl~~D~Dvv~~~dp~~~~~~~~~Di~ 94 (212)
T PF03407_consen 15 TYDALEELGPPCFYFPSDASESEDSAFRFGSKAFQKLTWLKPKVLLDLLELGYDVLFSDADVVWLRDPLPYFENPDADIL 94 (212)
T ss_pred HHHHHHhcCCCeEEEecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHcCCceEEecCCEEEecCcHHhhccCCCceE
Confidence 44667777777665555412111111122223333 4677777543 33 3346999999999999999999322 333
Q ss_pred cccCC-------CCCCcccceEEEEeCCHHH---HHHHHHHHHHcCCCCCCchHHHHHHHhccc---cCCCCCCCCcccc
Q psy2336 79 AAPDA-------GWPDCFNSGVFVFKPSEST---YNALVEFALVNGSFDGGDQGLLNLYFSDWA---TADSSKRLPFIYN 145 (222)
Q Consensus 79 av~d~-------~~~~~fNsGvmli~~~~~~---~~~l~~~~~~~~~~~~~DQ~iLN~~~~~~~---~~~~~~~Lp~~yN 145 (222)
...|. +....+|+|+|.++++... +++..+.+.+. ....||.++|.++.... ..-.+..||...-
T Consensus 95 ~~~d~~~~~~~~~~~~~~n~G~~~~r~t~~~~~~~~~w~~~~~~~--~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f 172 (212)
T PF03407_consen 95 FSSDGWDGTNSDRNGNLVNTGFYYFRPTPRTIAFLEDWLERMAES--PGCWDQQAFNELLREQAARYGGLRVRFLPPSLF 172 (212)
T ss_pred EecCCCcccchhhcCCccccceEEEecCHHHHHHHHHHHHHHHhC--CCcchHHHHHHHHHhcccCCcCcEEEEeCHHHe
Confidence 33332 1124579999999998655 44444444433 12349999999998632 1112455665433
Q ss_pred cccCcccccchHHHhh--CCCcEEEEecC
Q psy2336 146 MCSTSTYSYLPALKQF--GSKVKIIHFIG 172 (222)
Q Consensus 146 ~~~~~~~~~~~~~~~~--~~~~~IiHf~g 172 (222)
.....++.....+... ..+|.+||.++
T Consensus 173 ~~g~~~f~~~~~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 173 PNGHGYFCQSRDWAWVPTKNKPYIVHANC 201 (212)
T ss_pred eccccceeecchhhhhccccccceEEEcC
Confidence 2111111111122222 35899999986
No 25
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=96.57 E-value=0.0058 Score=55.58 Aligned_cols=131 Identities=21% Similarity=0.344 Sum_probs=74.4
Q ss_pred cchhhhhccCc-c----CCcceEEEEecCeeecCCChhhhCCC--Ccc---cccCCCCC---------CcccceEEEEeC
Q psy2336 38 GITFTKIHAWR-L----TQYSKCVFLDADVLIVQNCDELFDRE--ELS---AAPDAGWP---------DCFNSGVFVFKP 98 (222)
Q Consensus 38 ~~~~~Kl~i~~-L----~~ydrVLyLDaD~iv~~did~LF~~~--~~a---av~d~~~~---------~~fNsGvmli~~ 98 (222)
...|.|+-+-+ + .+.+-+.|||+|++|+. .-|++| .+. .|. .||+ ..+|+|+++|+.
T Consensus 179 p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImN---msfelPlery~~~NlVi-hg~~~~l~~~kdW~GLNtGsFLIRN 254 (429)
T PLN03182 179 AGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTD---MTFEIPLEKYEGYNLVI-HGWDELVYDQKSWIGLNTGSFLIRN 254 (429)
T ss_pred CcchhHHHHHHHHHHHCCCceEEEEecCCceeec---CCCCCCHhHcCCcCeee-ccchhhheeccccCccceeeEEEEc
Confidence 35688887654 2 36899999999999985 234443 111 110 1221 479999999998
Q ss_pred CHHHHHHHHHHH--------------------HHcCCCCCCchHHHHHHHh-c---cccCCCCCCCCcccccccCccccc
Q psy2336 99 SESTYNALVEFA--------------------LVNGSFDGGDQGLLNLYFS-D---WATADSSKRLPFIYNMCSTSTYSY 154 (222)
Q Consensus 99 ~~~~~~~l~~~~--------------------~~~~~~~~~DQ~iLN~~~~-~---~~~~~~~~~Lp~~yN~~~~~~~~~ 154 (222)
.++..+-|-+++ .....+...||..|-.++. + |. ++ ..|...|-+.. ++..
T Consensus 255 cqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~--~k-v~le~~y~l~G--yw~~ 329 (429)
T PLN03182 255 CQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWG--DK-VYLENSYYLHG--YWVG 329 (429)
T ss_pred CHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhc--cc-eEEeecceecc--ccHH
Confidence 765433222211 1112344569999999874 3 43 33 35666665542 1111
Q ss_pred -chHHHhh----------CCCcEEEEecCCCCCCC
Q psy2336 155 -LPALKQF----------GSKVKIIHFIGSSKPWL 178 (222)
Q Consensus 155 -~~~~~~~----------~~~~~IiHf~g~~KPW~ 178 (222)
...|++. ..-|.|.||+| .||=.
T Consensus 330 iv~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~ 363 (429)
T PLN03182 330 LVDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCG 363 (429)
T ss_pred HHHHHHHHHHhcCCCCCCcccceeEeecc-ceecC
Confidence 1112110 13479999999 68743
No 26
>KOG1928|consensus
Probab=94.45 E-value=0.074 Score=48.09 Aligned_cols=75 Identities=17% Similarity=0.301 Sum_probs=48.8
Q ss_pred EEEecCeeecCCChhhhCCCCcccccCCCCCCcccceEEEEeCCHHHHHHHHHHHHH-c-CCC-CCCchHHHHHHHhccc
Q psy2336 56 VFLDADVLIVQNCDELFDREELSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFALV-N-GSF-DGGDQGLLNLYFSDWA 132 (222)
Q Consensus 56 LyLDaD~iv~~did~LF~~~~~aav~d~~~~~~fNsGvmli~~~~~~~~~l~~~~~~-~-~~~-~~~DQ~iLN~~~~~~~ 132 (222)
||||+|+||++++..|=+. ++..++...-...|.+||.++++.....++++.... . +.. ...-.+++..+++.|.
T Consensus 242 vYLDTDvIvLksl~~l~N~--ig~~~~~~~~~~lnnavl~F~k~Hpfl~~cl~eF~~tfNg~~WG~NGP~LvTRVakr~c 319 (409)
T KOG1928|consen 242 VYLDTDVIVLKSLSNLRNV--IGVDPATQAWTRLNNAVLIFDKNHPFLLECLREFALTYNGNIWGHNGPYLVTRVAKRWC 319 (409)
T ss_pred EEeeccEEEeccccccccc--ccccchhhHHHhhcCceeecCCCCHHHHHHHHHHHHhccccccccCCcHHHHHHHHHHh
Confidence 8999999999999988753 111111111146899999999997766565554433 2 222 2235677888877653
No 27
>KOG1879|consensus
Probab=94.25 E-value=0.023 Score=57.91 Aligned_cols=116 Identities=23% Similarity=0.320 Sum_probs=71.5
Q ss_pred CcceEEEEecCeeecCCChhhhCCCC----cccccC-----C--C---CC-----------CcccceEEEEeCCHHHHHH
Q psy2336 51 QYSKCVFLDADVLIVQNCDELFDREE----LSAAPD-----A--G---WP-----------DCFNSGVFVFKPSESTYNA 105 (222)
Q Consensus 51 ~ydrVLyLDaD~iv~~did~LF~~~~----~aav~d-----~--~---~~-----------~~fNsGvmli~~~~~~~~~ 105 (222)
..+||||+|||.||+.||.||.+++- .+-+|= . | |+ .|==|.+.|+++. .|.+
T Consensus 1276 ~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW~~hL~grkYHISALYVVDLk--rFRe 1353 (1470)
T KOG1879|consen 1276 NVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYWKKHLRGRKYHISALYVVDLK--RFRE 1353 (1470)
T ss_pred ccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHHHHHhccCccccceeeeeeHH--HHHh
Confidence 78999999999999999999988761 222221 0 2 21 3556788888864 3333
Q ss_pred HHH--HHH--------HcCCCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHhhCCCcEEEEecCCCC
Q psy2336 106 LVE--FAL--------VNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIGSSK 175 (222)
Q Consensus 106 l~~--~~~--------~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~~~~IiHf~g~~K 175 (222)
+-+ .++ ..+++..-|||+-|.+.... .++.||..|=++.. |+... -.+.+++|--|- -
T Consensus 1354 iaAGDrLR~qYQ~LS~DPNSLsNLDQDLPNnm~hqV----pIkSLPqeWLWCET--WC~d~----skkkAktIDLCn--N 1421 (1470)
T KOG1879|consen 1354 IAAGDRLRGQYQALSQDPNSLSNLDQDLPNNMQHQV----PIKSLPQEWLWCET--WCDDE----SKKKAKTIDLCN--N 1421 (1470)
T ss_pred cccchHHHHHHHhhcCCcchhhhccccccccceeec----ccccCCcchhhhhh--hcCch----hhhhchhhhhhc--C
Confidence 321 111 12355566999999998863 36799998655431 22211 134566666553 5
Q ss_pred CCCCC
Q psy2336 176 PWLQH 180 (222)
Q Consensus 176 PW~~~ 180 (222)
||...
T Consensus 1422 P~TKE 1426 (1470)
T KOG1879|consen 1422 PLTKE 1426 (1470)
T ss_pred ccccc
Confidence 66654
No 28
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=94.05 E-value=0.032 Score=47.54 Aligned_cols=130 Identities=19% Similarity=0.242 Sum_probs=19.5
Q ss_pred cchhhhhccCc--c---CCcceEEEEecCeeecCCChhhhCC-------CCc-----ccccCC----------CC-----
Q psy2336 38 GITFTKIHAWR--L---TQYSKCVFLDADVLIVQNCDELFDR-------EEL-----SAAPDA----------GW----- 85 (222)
Q Consensus 38 ~~~~~Kl~i~~--L---~~ydrVLyLDaD~iv~~did~LF~~-------~~~-----aav~d~----------~~----- 85 (222)
..+|.|+.+-+ + .+++-|+|||+|++|+..=-+|.+. +.. ..++.. +.
T Consensus 58 ~~~W~K~~~lr~~m~~~P~~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~p~~~~~~~~~~~~~~~~~li 137 (239)
T PF05637_consen 58 PGSWAKIPALRAAMKKYPEAEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIVPPDSIIKTYSVIDGNDIHLI 137 (239)
T ss_dssp HHHHTHHHHHHHHHHH-TT-SEEEEE-TTEEE------------------------------------------------
T ss_pred ChhhHHHHHHHHHHHhCCCCCEEEEEcCCeEEEecccccccccccccccccccccccccccccccccccccccccccccc
Confidence 35688987654 2 4669999999999998633333211 000 001100 00
Q ss_pred ----CCcccceEEEEeCCHHHHHHHHHHHHH----cCC---CCCCchHHHHHHHhccc-cCCCCCCCCcc-cccccCccc
Q psy2336 86 ----PDCFNSGVFVFKPSESTYNALVEFALV----NGS---FDGGDQGLLNLYFSDWA-TADSSKRLPFI-YNMCSTSTY 152 (222)
Q Consensus 86 ----~~~fNsGvmli~~~~~~~~~l~~~~~~----~~~---~~~~DQ~iLN~~~~~~~-~~~~~~~Lp~~-yN~~~~~~~ 152 (222)
...+|+|+++++.+.... .+++.... ... ....||..|..+++.-. ....+..+|.+ .|......
T Consensus 138 ~t~d~~gLNtGsFliRns~ws~-~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~~~nsy~~~~- 215 (239)
T PF05637_consen 138 ITQDWNGLNTGSFLIRNSPWSR-DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQRWFNSYPEDE- 215 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 157999999999986553 34444322 111 23679999998887410 01233456643 23322110
Q ss_pred ccchHHHhhCCCcEEEEecCC
Q psy2336 153 SYLPALKQFGSKVKIIHFIGS 173 (222)
Q Consensus 153 ~~~~~~~~~~~~~~IiHf~g~ 173 (222)
..+. ......|+||.|+
T Consensus 216 ---~~~~-~~~GDfvvhfaGC 232 (239)
T PF05637_consen 216 ---CNYQ-YKEGDFVVHFAGC 232 (239)
T ss_dssp ---------------------
T ss_pred ---cccc-ccccccccccccc
Confidence 0111 1345689999994
No 29
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=93.50 E-value=0.044 Score=47.53 Aligned_cols=34 Identities=26% Similarity=0.459 Sum_probs=29.3
Q ss_pred hhhccCccCCcceEEEEecCeeecCCChhhhCCC
Q psy2336 42 TKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE 75 (222)
Q Consensus 42 ~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~ 75 (222)
.|..+--...++.||+||||++.+.|++.||+.+
T Consensus 81 ~K~lA~l~ssFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 81 NKWLALLFSSFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred hhhhhhhhCCcceEEEEcCCcccccCHHHHhcCc
Confidence 5555555568999999999999999999999986
No 30
>PLN03181 glycosyltransferase; Provisional
Probab=88.60 E-value=0.99 Score=41.53 Aligned_cols=104 Identities=19% Similarity=0.303 Sum_probs=60.9
Q ss_pred ccchhhhhccCc-----cCCcceEEEEecCeeecCCChhhhCCC-----CcccccCCCCC---------CcccceEEEEe
Q psy2336 37 LGITFTKIHAWR-----LTQYSKCVFLDADVLIVQNCDELFDRE-----ELSAAPDAGWP---------DCFNSGVFVFK 97 (222)
Q Consensus 37 ~~~~~~Kl~i~~-----L~~ydrVLyLDaD~iv~~did~LF~~~-----~~aav~d~~~~---------~~fNsGvmli~ 97 (222)
....|.|+-+-+ ..+.+-+-|||+|++|+.. -|.++ ...-+ -.||| ..+|+|+++|+
T Consensus 179 ~p~~WaKipalRaAM~a~PeAEWfWWLDsDALIMNp---~~sLPl~ry~~~NLv-vhg~p~~vy~~qdw~GlN~GsFLIR 254 (453)
T PLN03181 179 MNSYWAKLPVVRAAMLAHPEAEWIWWVDSDAVFTDM---DFKLPLHRYRDHNLV-VHGWPKLIYEKRSWTALNAGVFLIR 254 (453)
T ss_pred CchhhhHHHHHHHHHHHCCCceEEEEecCCceeecC---CCCCCHhhcCCcccc-ccCCcccccccccccccceeeeEEe
Confidence 345688887655 3478999999999999954 22222 11111 11222 57999999999
Q ss_pred CCHHHHHHHHHHHH-------------------H-cCCCCCCchHHHHHHHh-c---cccCCCCCCCCcccccc
Q psy2336 98 PSESTYNALVEFAL-------------------V-NGSFDGGDQGLLNLYFS-D---WATADSSKRLPFIYNMC 147 (222)
Q Consensus 98 ~~~~~~~~l~~~~~-------------------~-~~~~~~~DQ~iLN~~~~-~---~~~~~~~~~Lp~~yN~~ 147 (222)
.+++..+-|-.+.. + ......-||..|-.++- + |. ++ ..|...|-++
T Consensus 255 NcqWSl~LLDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~--~k-~ylE~~yy~~ 325 (453)
T PLN03181 255 NCQWSLDFMDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWG--DK-IYLEGEYYFE 325 (453)
T ss_pred cCHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhc--cc-eeeecceeee
Confidence 87543322222111 1 12233459999987754 2 53 33 3666666654
No 31
>PRK15384 type III secretion system protein; Provisional
Probab=87.37 E-value=0.58 Score=40.08 Aligned_cols=50 Identities=16% Similarity=0.422 Sum_probs=36.8
Q ss_pred CcceEEEEecCeeecCCChhhhCCCCcccccCC-CCCCcccceEEEEeCCH
Q psy2336 51 QYSKCVFLDADVLIVQNCDELFDREELSAAPDA-GWPDCFNSGVFVFKPSE 100 (222)
Q Consensus 51 ~ydrVLyLDaD~iv~~did~LF~~~~~aav~d~-~~~~~fNsGvmli~~~~ 100 (222)
..+-+||||+|||+++.+.-|+.-+.+|.-.+. +-....-.|.+++|.+.
T Consensus 215 ~~~GCIYLDaDMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 265 (336)
T PRK15384 215 TNSGCIYLDADMIITEKLGGIYIPDGIAVHVERIDGRASMENGIIAVDRNN 265 (336)
T ss_pred CCCceEEeeccceeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 457899999999999999999987777653332 11234557888888763
No 32
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=87.20 E-value=0.64 Score=39.79 Aligned_cols=50 Identities=22% Similarity=0.474 Sum_probs=37.0
Q ss_pred CcceEEEEecCeeecCCChhhhCCCCcccccCC-CCCCcccceEEEEeCCH
Q psy2336 51 QYSKCVFLDADVLIVQNCDELFDREELSAAPDA-GWPDCFNSGVFVFKPSE 100 (222)
Q Consensus 51 ~ydrVLyLDaD~iv~~did~LF~~~~~aav~d~-~~~~~fNsGvmli~~~~ 100 (222)
..+-+||||+|||+++.|.-|+.-+.+|.-.+. +-....--|.+++|.+.
T Consensus 210 ~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 260 (326)
T PRK15382 210 PCEGCIYLDADMIITDKLGVLYAPDGIAVHVDCNDDSKSLENGAIVVNRSN 260 (326)
T ss_pred CCCceEEeecceeeecccccEEcCCceEEEEEecCCccccccceEEEccCC
Confidence 457899999999999999999987777653332 11234557888888763
No 33
>PRK15383 type III secretion system protein; Provisional
Probab=85.98 E-value=0.8 Score=39.24 Aligned_cols=50 Identities=20% Similarity=0.393 Sum_probs=36.8
Q ss_pred CcceEEEEecCeeecCCChhhhCCCCcccccCC-CCCCcccceEEEEeCCH
Q psy2336 51 QYSKCVFLDADVLIVQNCDELFDREELSAAPDA-GWPDCFNSGVFVFKPSE 100 (222)
Q Consensus 51 ~ydrVLyLDaD~iv~~did~LF~~~~~aav~d~-~~~~~fNsGvmli~~~~ 100 (222)
...-+||||+|||+++.|.-|+.-+.+|.-.+. +-....--|.+++|.+.
T Consensus 218 ~~~GCIYLD~DMilT~KLG~ly~PDGIavhV~r~~~~~slENg~I~VnRsn 268 (335)
T PRK15383 218 PGGGCIYLDADMLLTDKLGTLYLPDGIAIHVSRKDNHVSLENGIIAVNRSE 268 (335)
T ss_pred CCCceEEeecceeeecccccEEcCCceEEEEEecCCceecccceEEEccCC
Confidence 457899999999999999999987777653332 11234557888888763
No 34
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=77.86 E-value=3 Score=36.22 Aligned_cols=129 Identities=18% Similarity=0.130 Sum_probs=67.5
Q ss_pred CCcc-chhhhhccC-----cc--CCcceEEEEecCeeecCCCh-hhhC-C-----CCcccccC------------CCCC-
Q psy2336 35 PDLG-ITFTKIHAW-----RL--TQYSKCVFLDADVLIVQNCD-ELFD-R-----EELSAAPD------------AGWP- 86 (222)
Q Consensus 35 ~~~~-~~~~Kl~i~-----~L--~~ydrVLyLDaD~iv~~did-~LF~-~-----~~~aav~d------------~~~~- 86 (222)
.+|. .+..|+.++ ++ -++|-+.++|+|+++.+++. |.+. + +..-..+. +..|
T Consensus 99 ~~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg~lva~lHp~~y~~~~~~fpYERrp~S~AyIp~ 178 (271)
T cd02515 99 SRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLGDSVAQLHPWWYGKPRKQFPYERRPSSAAYIPE 178 (271)
T ss_pred cCCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhhhhheecChhhhcCCCCCCCCcCCCCccccccC
Confidence 3443 455666655 22 38899999999999999886 4432 1 10000000 0111
Q ss_pred ----CcccceEEEEeCC--HHHHHHHHHHHHH---cC-CCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccch
Q psy2336 87 ----DCFNSGVFVFKPS--ESTYNALVEFALV---NG-SFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLP 156 (222)
Q Consensus 87 ----~~fNsGvmli~~~--~~~~~~l~~~~~~---~~-~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~ 156 (222)
-|+.+|+.-=.+. .+.-+.+.+.+.. ++ .-.+.|..-||.+|-.. ...+.||+.|+.......
T Consensus 179 ~eGdfYy~Ga~~GG~~~~vl~l~~~c~~~i~~D~~n~I~A~wHDESHLNkYf~~~---Kp~KiLSPeY~w~e~~~~---- 251 (271)
T cd02515 179 GEGDFYYHGAVFGGSVEEVYRLTRACHEGILADKANGIEARWHDESHLNKYFLLH---KPTKVLSPEYLWDDRIGQ---- 251 (271)
T ss_pred CCCCeEEeeeecCccHHHHHHHHHHHHHHHHHHHhCCceEEeecHhHhHHHHhhC---CCCeecChhhcCCccCCC----
Confidence 2444444322222 1122222222221 22 22467999999998852 235789999998653221
Q ss_pred HHHhhCCCcEEEEecCCCC
Q psy2336 157 ALKQFGSKVKIIHFIGSSK 175 (222)
Q Consensus 157 ~~~~~~~~~~IiHf~g~~K 175 (222)
..+++++-++...|
T Consensus 252 -----p~~~k~~r~~~~~K 265 (271)
T cd02515 252 -----AAEIRLPRLSWLPK 265 (271)
T ss_pred -----CcccceeEEEEecc
Confidence 24556666654333
No 35
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=76.82 E-value=1.4 Score=32.23 Aligned_cols=18 Identities=28% Similarity=0.578 Sum_probs=15.8
Q ss_pred EEEecCeeecCCC-hhhhC
Q psy2336 56 VFLDADVLIVQNC-DELFD 73 (222)
Q Consensus 56 LyLDaD~iv~~di-d~LF~ 73 (222)
+|+|+|+++++++ +.+-.
T Consensus 80 iY~D~D~~~~rpl~~~~~~ 98 (103)
T PF04488_consen 80 IYLDLDVICLRPLDDPWLP 98 (103)
T ss_pred EEEeCccccCcchhhhhhc
Confidence 8999999999999 77653
No 36
>KOG1950|consensus
Probab=74.13 E-value=3.5 Score=37.29 Aligned_cols=36 Identities=31% Similarity=0.463 Sum_probs=33.2
Q ss_pred hhhhhccCccCCcceEEEEecCeeecCCChhhhCCC
Q psy2336 40 TFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE 75 (222)
Q Consensus 40 ~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~ 75 (222)
...++.++++.++.+.+|++.|+.+..++++.|+..
T Consensus 113 ~~~~~~~~~~~~~~a~i~~~~~i~~~~~~~~~~~v~ 148 (369)
T KOG1950|consen 113 RDDKIKIWRLIEDGAAIYLVDDIQRFRNDDANFDVP 148 (369)
T ss_pred cccceeecceeccCceEEEecchhhccCcccccccc
Confidence 478899999999999999999999999999999885
No 37
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=73.08 E-value=14 Score=31.05 Aligned_cols=81 Identities=28% Similarity=0.461 Sum_probs=48.9
Q ss_pred cCCcceEEEEecCeeecCCC---hhhhCCCCcccc-cCCCCCCcccceEEEEeCCHHHHHHHHHHHHH----cCCCCCCc
Q psy2336 49 LTQYSKCVFLDADVLIVQNC---DELFDREELSAA-PDAGWPDCFNSGVFVFKPSESTYNALVEFALV----NGSFDGGD 120 (222)
Q Consensus 49 L~~ydrVLyLDaD~iv~~di---d~LF~~~~~aav-~d~~~~~~fNsGvmli~~~~~~~~~l~~~~~~----~~~~~~~D 120 (222)
|.+++-||+||+|+-|+.+= .|.-+-. +--+ .|.-.-.-+.+|--++..+...-+=|.+++.- ..++.+.|
T Consensus 39 L~~~~~vlflDaDigVvNp~~~iEefid~~-~Di~fydR~~n~Ei~agsYlvkNT~~~~~fl~~~a~~E~~lP~sfhGtD 117 (222)
T PF03314_consen 39 LPEYDWVLFLDADIGVVNPNRRIEEFIDEG-YDIIFYDRFFNWEIAAGSYLVKNTEYSRDFLKEWADYEFKLPNSFHGTD 117 (222)
T ss_pred hccCCEEEEEcCCceeecCcccHHHhcCCC-CcEEEEecccchhhhhccceeeCCHHHHHHHHHHhhhCccCCCccccCc
Confidence 35899999999999998653 3333221 1111 11101123568888888776544434444321 23567889
Q ss_pred hHHHHHHHhc
Q psy2336 121 QGLLNLYFSD 130 (222)
Q Consensus 121 Q~iLN~~~~~ 130 (222)
.+.|-.++..
T Consensus 118 NGAlH~~L~e 127 (222)
T PF03314_consen 118 NGALHIFLAE 127 (222)
T ss_pred cHHHHHHHHH
Confidence 9999998876
No 38
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=48.51 E-value=21 Score=31.73 Aligned_cols=40 Identities=18% Similarity=0.333 Sum_probs=33.4
Q ss_pred CCCccchhhhhccCccC-CcceEEEEecCeeecCCChhhhC
Q psy2336 34 RPDLGITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFD 73 (222)
Q Consensus 34 ~~~~~~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~ 73 (222)
+|+-.+.+.|+..-++. +|+--||+|+-+.+++|+..|.+
T Consensus 134 d~rr~~r~~K~lpHrlfp~y~ySIWID~ki~L~~Dp~~lie 174 (305)
T PF04765_consen 134 DPRRNGRIPKLLPHRLFPNYDYSIWIDGKIQLIVDPLLLIE 174 (305)
T ss_pred chhhcCcccceeccccCCCCceEEEEeeeEEEecCHHHHHH
Confidence 55666678999988875 89999999999999999877654
No 39
>KOG4748|consensus
Probab=45.23 E-value=59 Score=29.58 Aligned_cols=132 Identities=20% Similarity=0.252 Sum_probs=71.4
Q ss_pred CccchhhhhccCcc-----CCcceEEEEecCeeecCCChh----hhCCC------------Cccccc-----CC------
Q psy2336 36 DLGITFTKIHAWRL-----TQYSKCVFLDADVLIVQNCDE----LFDRE------------ELSAAP-----DA------ 83 (222)
Q Consensus 36 ~~~~~~~Kl~i~~L-----~~ydrVLyLDaD~iv~~did~----LF~~~------------~~aav~-----d~------ 83 (222)
.+...|.|+=+-+- .+-+-+=+||.|++|+..--+ +++-. .+.+.- ..
T Consensus 155 e~~~~W~KiP~Ir~tM~kyP~AeWIWWlD~DAlimn~~lsL~~~ilk~~~L~~~l~~nd~~~~~~~n~~~~~~~~~~~d~ 234 (364)
T KOG4748|consen 155 ELPGVWAKLPAIRQTMLKYPDAEWIWWLDQDALIMNPDLSLQDHILKPENLVTHLLRNDQKSINPLNIFRLRPRTPSLDD 234 (364)
T ss_pred cccchhHHhHHHHHHHHHCCCCcEEEEecccchhhCcccchhHHhcCHHHHHHhhccccccccccCCccccccccccccc
Confidence 34456777764432 367889999999999853222 22210 111110 00
Q ss_pred --CC-------CCcccceEEEEeCCHH---HHHHHHHHHHHcCCCCCCchHHHHHHHhc--cccCCCCCCCCccc-cccc
Q psy2336 84 --GW-------PDCFNSGVFVFKPSES---TYNALVEFALVNGSFDGGDQGLLNLYFSD--WATADSSKRLPFIY-NMCS 148 (222)
Q Consensus 84 --~~-------~~~fNsGvmli~~~~~---~~~~l~~~~~~~~~~~~~DQ~iLN~~~~~--~~~~~~~~~Lp~~y-N~~~ 148 (222)
.+ ...+|+|=+|+..+.. .++-.-+-+...-.....+|+.+..++.+ +. ...+..||.+| |...
T Consensus 235 ~~~~~~ii~qD~nG~naGSfLirns~~~~~llD~w~dp~l~~~~~~~~Eq~al~~~~e~h~~l-~~~vgilp~r~ins~~ 313 (364)
T KOG4748|consen 235 LEDIAFIIPQDCNGINAGSFLIRNSEWGRLLLDAWNDPLLYELLWGQKEQDALGHFLENHPQL-HSHVGILPLRYINSYP 313 (364)
T ss_pred hhhhceecccCCCCccccceEEecCccchhHHHhccCHHHHhhccchHHHHHHHHHHhhchhh-hhheeeccHHHHhcCC
Confidence 00 1579999999988742 22222221211223345699999999885 21 12245677665 4322
Q ss_pred CcccccchHHHhhCCCcEEEEecCC
Q psy2336 149 TSTYSYLPALKQFGSKVKIIHFIGS 173 (222)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~IiHf~g~ 173 (222)
. +.|.+.. .+...++||.|+
T Consensus 314 ~----~~~~~g~-~egdlvvhFaGC 333 (364)
T KOG4748|consen 314 N----GAPGYGY-EEGDLVVHFAGC 333 (364)
T ss_pred C----CCCCCcc-ccCCeEEEeccc
Confidence 1 1122211 356899999996
No 40
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=42.38 E-value=21 Score=32.08 Aligned_cols=112 Identities=13% Similarity=0.081 Sum_probs=53.5
Q ss_pred CCCccc-hhhhhccCc-------cCCcceEEEEecCeeecCCCh-hhhCC------CCcccc-cC-----------CCCC
Q psy2336 34 RPDLGI-TFTKIHAWR-------LTQYSKCVFLDADVLIVQNCD-ELFDR------EELSAA-PD-----------AGWP 86 (222)
Q Consensus 34 ~~~~~~-~~~Kl~i~~-------L~~ydrVLyLDaD~iv~~did-~LF~~------~~~aav-~d-----------~~~~ 86 (222)
..+|.. +..|+.+.. +-++|-+..+|+|+++.+++. |...- +..-.. +. +..|
T Consensus 163 ~~~Wqd~sm~Rm~~i~~~i~~~~~~EvDYLFc~dvd~~F~~~vGvE~Lg~lva~LHp~~y~~~~~~FpYERrp~S~AyIp 242 (337)
T PF03414_consen 163 EKRWQDISMMRMEMISEHIEQHIQHEVDYLFCMDVDMVFQDHVGVEILGDLVATLHPWFYFKPRESFPYERRPKSQAYIP 242 (337)
T ss_dssp GSSHHHHHHHHHHHHHHHHHHCHHHH-SEEEEEESSEEE-S-B-GGG-SSEEEEESTTTTTSTGGGS--B-STTSTTB--
T ss_pred cCCCccchhHHHHHHHHHHHHHHhhcCCEEEEEecceEEecccCHHHHHHHHHHhCHHHHCCChhhCccccCcccccccc
Confidence 345553 455555444 136899999999999999886 43321 100000 00 0111
Q ss_pred -----CcccceEEEEeCC------HHHHHHHHHHHHHcCCCCCCchHHHHHHHhccccCCCCCCCCccccccc
Q psy2336 87 -----DCFNSGVFVFKPS------ESTYNALVEFALVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCS 148 (222)
Q Consensus 87 -----~~fNsGvmli~~~------~~~~~~l~~~~~~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~ 148 (222)
-|+.+|+.-=.+. +...+.+.....++-.-.+.|..-||.+|-.. ...+.||+.|+...
T Consensus 243 ~~eGDfYY~ga~fGGt~~~vl~Lt~~c~~~i~~D~~n~I~A~WhDESHLNKYfl~~---KPtKvLSPEY~Wd~ 312 (337)
T PF03414_consen 243 YGEGDFYYHGAFFGGTVEEVLRLTEACHQGIMQDKANGIEALWHDESHLNKYFLYH---KPTKVLSPEYCWDE 312 (337)
T ss_dssp TT--S--EECCEEEECHHHHHHHHHHHHHHHHHHHHTT---TTCHHHHHHHHHHHS-----SEEE-GGGSBSH
T ss_pred CCCCCeEEeceecCCcHHHHHHHHHHHHHHHHhhhhcCceEeccchhhhHHHHhhC---CCceecCHHHccCc
Confidence 3556666543332 12222232222222233567999999988631 13468999998754
No 41
>PF05704 Caps_synth: Capsular polysaccharide synthesis protein; InterPro: IPR008441 This entry consists of several capsular polysaccharide proteins. Capsular polysaccharide (CPS) is a major virulence factor in Streptococcus pneumoniae. This family is often transcribed with putative glycosyl transferases to give rise to bifunctional proteins [].
Probab=36.88 E-value=53 Score=28.52 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=39.8
Q ss_pred chhhhhccCccCCcceEEEEecCeeecCCChhhhCCCCcccc--cCC-CCC---CcccceEEEEeCCHHHHHHHHHHHHH
Q psy2336 39 ITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDREELSAA--PDA-GWP---DCFNSGVFVFKPSESTYNALVEFALV 112 (222)
Q Consensus 39 ~~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~~~aav--~d~-~~~---~~fNsGvmli~~~~~~~~~l~~~~~~ 112 (222)
+.+.|+.+..--+. +|+||++++.+++++.+.-..+.+. ++. +.+ ..+.+++|.-.++....+.+.+.+.+
T Consensus 112 SDilR~~LL~~yGG---vWiDatv~~t~~l~~~~~~~~ff~~~~~~~~~~~~~~~~w~~~fi~a~~~n~~~~~~~~~~~~ 188 (276)
T PF05704_consen 112 SDILRLALLYKYGG---VWIDATVYLTKPLDDEIFDSDFFSFSRPDKDYNPISISSWTNFFIAAKKGNPFIKFWRDLLLE 188 (276)
T ss_pred HHHHHHHHHHHcCc---EEeCCceEECCchhHHHhcCCeeEEeccCcCcccchHHHhHhhheeECCCCHHHHHHHHHHHH
Confidence 44566655433222 8999999999999976543222211 111 111 23456677777776666555554443
Done!