Query psy2336
Match_columns 222
No_of_seqs 128 out of 1139
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 21:59:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2336.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2336hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u2u_A Glycogenin-1, GN-1, GN1 100.0 4.4E-45 1.5E-49 313.2 15.7 211 4-214 48-262 (263)
2 1ll2_A Glycogenin-1; protein-s 100.0 7E-42 2.4E-46 302.5 12.8 215 4-218 47-265 (333)
3 3tzt_A Glycosyl transferase fa 100.0 4.5E-31 1.5E-35 227.6 6.5 153 38-208 85-270 (276)
4 1g9r_A Glycosyl transferase; a 99.9 5.3E-28 1.8E-32 211.4 9.4 139 38-181 81-256 (311)
5 2p6w_A VP54, putative glycosyl 84.6 0.79 2.7E-05 36.8 3.6 53 50-105 71-136 (213)
6 1o7q_A N-acetyllactosaminide a 78.0 2.1 7.3E-05 36.3 4.2 94 51-149 138-263 (289)
7 4ayl_A BOGT-metal-independent 52.3 24 0.00083 29.1 5.5 96 51-149 87-217 (246)
8 3ioh_A Histo-blood group ABO s 42.6 18 0.00063 30.7 3.4 112 34-148 122-271 (298)
9 1loi_A Cyclic 3',5'-AMP specif 34.0 16 0.00055 18.7 1.1 8 173-180 11-18 (26)
10 2c0n_A A197; thermophil protei 17.6 60 0.002 25.9 2.0 23 50-72 52-75 (203)
No 1
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=100.00 E-value=4.4e-45 Score=313.17 Aligned_cols=211 Identities=57% Similarity=1.055 Sum_probs=183.5
Q ss_pred hhHHHhhhCCEEEEEeccCCCccccccccCCCCccchhhhhccCccCCcceEEEEecCeeecCCChhhhCCCCcccccCC
Q psy2336 4 APNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDREELSAAPDA 83 (222)
Q Consensus 4 ~~~~L~~~~~~vi~v~~~~~~~~~~~~~~~~~~~~~~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~~~aav~d~ 83 (222)
++++|++++++|+.|+++...+..++..+++|++..+|+|+.+|++++|+||||||+|++|++||++||+++.++|++|.
T Consensus 48 ~~~~L~~~~~~vi~V~~l~~~~~~~~~~~~rp~~~~~~~kl~~~~l~~~~~vlylD~D~~v~~~~~~Lf~~~~~aA~~d~ 127 (263)
T 3u2u_A 48 MRKVLETVFDEVIMVDVLDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDP 127 (263)
T ss_dssp HHHHHHHHSSEEEECCCCCCCCHHHHHHTTCTTGGGGGGGGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECT
T ss_pred HHHHHHHcCCeEEEeeecCCcchhhhhhhcCcchhHHhHHHHhccccCcceEEEEcCCEeeccCHHHHhCCCcceEeccC
Confidence 57899999999999999988766555556789999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccceEEEEeCCHHHHHHHHHHHHHcCCCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHhhCC
Q psy2336 84 GWPDCFNSGVFVFKPSESTYNALVEFALVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGS 163 (222)
Q Consensus 84 ~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~ 163 (222)
||+.+|||||||++|+..+++++++.+.+.+.+.++||++||.+|.+|...+.+..||.+||++....|++.|.++.+.+
T Consensus 128 ~~~~~fNsGv~li~p~~~~~~~l~~~~~~~~~~~~~DQd~LN~~f~~w~~~~~~~~Lp~~yN~~~~~~y~~~~~~~~~~~ 207 (263)
T 3u2u_A 128 GWPDCFNSGVFVYQPSVETYNQLLHLASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFKVFGA 207 (263)
T ss_dssp TSTTSEEEEEEEECCCHHHHHHHHHHHHHHCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEEHHHHHSSHHHHHHHGG
T ss_pred CCCccccCeEEEEcccHHHHHHHHHHHHhcCCCCcccHHHHHHHhccccccCeeEeCCcccccccchhccccHHHHhhcC
Confidence 99999999999999999999999999988778889999999999998743345679999999998766666777776678
Q ss_pred CcEEEEecCCCCCCCCCCCCCCcccccCC--c--cchHHHHHHHHHHhhccCCcc
Q psy2336 164 KVKIIHFIGSSKPWLQHFDSTTGAILSGD--S--HLTNFLQLWWDVFVVHVHPTL 214 (222)
Q Consensus 164 ~~~IiHf~g~~KPW~~~~~~~~~~~~~~~--~--~~~~~~~~Ww~~~~~~~~~~~ 214 (222)
+++||||+|..|||+..+.+..+.+..+. + .+..+.+.||+.|.+.++|.+
T Consensus 208 ~~~IIHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ww~~~~~~~~~~~ 262 (263)
T 3u2u_A 208 SAKVVHFLGRVKPWNYTYDPKTKSVKSEAHDPNMTHPEFLILWWNIFTTNVLPLL 262 (263)
T ss_dssp GCSEEECCSSSCGGGSEEETTTTEEECCSSCGGGSSTHHHHHHHHHHHHHTGGGG
T ss_pred CeEEEEECCCCcCCCCCCCCCCCcccccCCCcchhHHHHHHHHHHHHHhhcCcCC
Confidence 99999999999999998866554333221 1 246899999999999998875
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=100.00 E-value=7e-42 Score=302.49 Aligned_cols=215 Identities=55% Similarity=1.032 Sum_probs=176.0
Q ss_pred hhHHHhhhCCEEEEEeccCCCccccccccCCCCccchhhhhccCccCCcceEEEEecCeeecCCChhhhCCCCcccccCC
Q psy2336 4 APNELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDREELSAAPDA 83 (222)
Q Consensus 4 ~~~~L~~~~~~vi~v~~~~~~~~~~~~~~~~~~~~~~~~Kl~i~~L~~ydrVLyLDaD~iv~~did~LF~~~~~aav~d~ 83 (222)
.++.|+++++.|+.|+++......+.....++++..+|+||.+|+|.+|+||||||||+||++||++||+++.++|++|.
T Consensus 47 ~~~~L~~~~~~v~~v~~l~~~~~~~~~~~~~~~~~~t~~Kl~i~~l~~ydrvlYLDaD~lv~~di~eLf~~~~~aAv~d~ 126 (333)
T 1ll2_A 47 MRKALEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFEREELSAAPDP 126 (333)
T ss_dssp HHHHHHHHCSEEEECCTTSTTSTTHHHHHHCGGGHHHHHHGGGGGCTTCSEEEEECTTEEECSCCGGGGGSCSSEEEECS
T ss_pred HHHHHHHhCCEEEEEeecCCcchhhcccccccchHHHHHHHHHhHhcCCCeEEEEeCCEEeccCHHHHhCCCceeEEecC
Confidence 46789999999999999887665443334577888899999999999999999999999999999999999999999999
Q ss_pred CCCCcccceEEEEeCCHHHHHHHHHHHHHcCCCCCCchHHHHHHHhccccCCCCCCCCcccccccCcccccchHHHhhCC
Q psy2336 84 GWPDCFNSGVFVFKPSESTYNALVEFALVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGS 163 (222)
Q Consensus 84 ~~~~~fNsGvmli~~~~~~~~~l~~~~~~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~~~~~~~~~~ 163 (222)
+||.+|||||||++|+...++++++.+.+.+.+.++||++||.+|.+|...+++..||.+||++....+.+.|.++....
T Consensus 127 ~~~~~fNsGvmlin~~~~~~~~l~~~~~~~~~~~~~DQ~~LN~~f~~~~~~~~~~~Lp~~yN~~~~~~~~~~p~~~~~~~ 206 (333)
T 1ll2_A 127 GWPDCFNSGVFVYQPSVETYNQLLHVASEQGSFDGGDQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPAFKAFGA 206 (333)
T ss_dssp SSTTSEEEEEEEECCCHHHHHHHHHHHHHTCCTTSSHHHHHHHHTTTTTTSCGGGBCCGGGSEETTHHHHTHHHHHHHGG
T ss_pred CCCcceeeeEEEEeCCHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHhhcccCccccCCcHHhcccccchhccHHHHhhcC
Confidence 99999999999999999999999999988778889999999999998632234469999999998765555666665678
Q ss_pred CcEEEEecCCCCCCCCCCCCCCcccccCC--c--cchHHHHHHHHHHhhccCCccchhh
Q psy2336 164 KVKIIHFIGSSKPWLQHFDSTTGAILSGD--S--HLTNFLQLWWDVFVVHVHPTLTTEM 218 (222)
Q Consensus 164 ~~~IiHf~g~~KPW~~~~~~~~~~~~~~~--~--~~~~~~~~Ww~~~~~~~~~~~~~~~ 218 (222)
+++||||+|..|||+..+....+...+.. . .+..+++.||++|+++.+|.+.+++
T Consensus 207 ~~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~WW~~~~~~~~~~~~~~~ 265 (333)
T 1ll2_A 207 NAKVVHFLGQTKPWNYTYDTKTKSVRSEGHDPTMTHPQFLNVWWDIFTTSVVPLLQQFG 265 (333)
T ss_dssp GCSEEECCSSCCGGGSCEETTTTEEC--------CCHHHHHHHHHHHHHTHHHHHTC--
T ss_pred CCEEEEECCCCCCCCCCCCCCccccccccccccccHHHHHHHHHHHHHhhcccccchhh
Confidence 89999999999999987643222222111 1 1458999999999999988776553
No 3
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=99.96 E-value=4.5e-31 Score=227.62 Aligned_cols=153 Identities=24% Similarity=0.410 Sum_probs=112.6
Q ss_pred cchhhhhccCccC--CcceEEEEecCeeecCCChhhhCCC----CcccccCCCCC---------------CcccceEEEE
Q psy2336 38 GITFTKIHAWRLT--QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAGWP---------------DCFNSGVFVF 96 (222)
Q Consensus 38 ~~~~~Kl~i~~L~--~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~~~---------------~~fNsGvmli 96 (222)
..+|.||++++++ +++||||||+|++|++||++||+++ .+|||+|.+.+ .||||||||+
T Consensus 85 ~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~~aav~d~~~~~~~~~~~~~~l~~~~~yfNsGV~li 164 (276)
T 3tzt_A 85 KEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYILAAASHTGKTDMANNVNRIRLGTDTDYYNSGLLLI 164 (276)
T ss_dssp HHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSSEEEEEC--------------------CEEEEEEEE
T ss_pred HHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCeEEEEEecccchHHHHHHHhcCCCCCCeEEeeEEEE
Confidence 3689999999986 5899999999999999999999986 47888875321 7999999999
Q ss_pred eCCHHH----HHHHHHHHHHcC-CCCCCchHHHHHHHhccccCCCCCCCCc-ccccccCccccc--ch----HHHhhCCC
Q psy2336 97 KPSEST----YNALVEFALVNG-SFDGGDQGLLNLYFSDWATADSSKRLPF-IYNMCSTSTYSY--LP----ALKQFGSK 164 (222)
Q Consensus 97 ~~~~~~----~~~l~~~~~~~~-~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~-~yN~~~~~~~~~--~~----~~~~~~~~ 164 (222)
|+++.. .+++++.+.++. .+.++|||+||.+|.+ .+..||. +||++.+....+ .+ .++...++
T Consensus 165 nl~~~R~~~~~~~~~~~~~~~~~~~~~~DQd~LN~~f~~-----~~~~Lp~~~wN~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (276)
T 3tzt_A 165 NLKRAREEIDPDEIFSFVEDNHMNLLLPDQDILNAMYGD-----RIYPLDDLIYNYDARNYSSYLIRSKKQADLAWLMDH 239 (276)
T ss_dssp EHHHHHHHCCHHHHHHHHHHC--------CHHHHHHHGG-----GEEEEEHHHHSEETTCHHHHHHHTTTCCSHHHHHHH
T ss_pred EHHHHHhhhHHHHHHHHHHhccccccCCChhHHHHHHhC-----CEEECCchheeeecccchhhhccccchhhhhhhccC
Confidence 998643 566777776654 5678999999999996 2359999 999987532110 00 11223567
Q ss_pred cEEEEecCCCCCCCCCCCCCCcccccCCccchHHHHHHHHHHhh
Q psy2336 165 VKIIHFIGSSKPWLQHFDSTTGAILSGDSHLTNFLQLWWDVFVV 208 (222)
Q Consensus 165 ~~IiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~~~~~Ww~~~~~ 208 (222)
++||||+|..|||...+ ..+++++||.|++.
T Consensus 240 ~~iiHy~g~~KPW~~~~-------------~~~~~~~w~~Y~~~ 270 (276)
T 3tzt_A 240 TVVLHFCGRDKPWKKNH-------------RNKFTSLYKHYMSL 270 (276)
T ss_dssp CCEEECCSSCCTTSTTC-------------CSTTHHHHHHHHHH
T ss_pred CeEEEECCCCCCcCCCC-------------CCchHHHHHHHHHH
Confidence 99999999999999775 24789999999864
No 4
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=99.95 E-value=5.3e-28 Score=211.36 Aligned_cols=139 Identities=22% Similarity=0.304 Sum_probs=108.7
Q ss_pred cchhhhhccCccC-CcceEEEEecCeeecCCChhhhCCC----CcccccCCC------------C---CCcccceEEEEe
Q psy2336 38 GITFTKIHAWRLT-QYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAG------------W---PDCFNSGVFVFK 97 (222)
Q Consensus 38 ~~~~~Kl~i~~L~-~ydrVLyLDaD~iv~~did~LF~~~----~~aav~d~~------------~---~~~fNsGvmli~ 97 (222)
..+|.||++++++ +++||||||||+||++||++||+++ .+|||+|.+ . ..+|||||||+|
T Consensus 81 ~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~di~eL~~~~l~~~~~aav~d~~~~~~~~~~~~~~~~~~~~yfNsGv~lin 160 (311)
T 1g9r_A 81 ITTYARLKLGEYIADCDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADGEYYFNAGVLLIN 160 (311)
T ss_dssp GGGGGGGGHHHHCCSCSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTHHHHTTCCTTSCCEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhhcCEEEEEcCCeEeccCHHHHhccCCCCcEEEEEeccchhhhHHHHHhcCCCCCCceEeeeeeeee
Confidence 4689999999964 8999999999999999999999986 467777631 1 259999999999
Q ss_pred CCH----HHHHHHHHHHHHcC-CCCCCchHHHHHHHhccccCCCCCCCCcccccccCccccc---------ch---HHHh
Q psy2336 98 PSE----STYNALVEFALVNG-SFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSY---------LP---ALKQ 160 (222)
Q Consensus 98 ~~~----~~~~~l~~~~~~~~-~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~~~~~~---------~~---~~~~ 160 (222)
+++ ...+++++.+.+.. .+.++||++||.+|.+ .+..||.+||++....... .+ .+..
T Consensus 161 l~~~r~~~~~~~~~~~~~~~~~~~~~~DQd~lN~~f~~-----~~~~Lp~~wN~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 1g9r_A 161 LKKWRRHDIFKMSSEWVEQYKDVMQYQDQDILNGLFKG-----GVCYANSRFNFMPTNYAFMANWFASRHTDPLYRDRTN 235 (311)
T ss_dssp HHHHTTSCHHHHHHHHHHHHTTTCSSHHHHHHHHHHTT-----SEEEECGGGSBCHHHHHTCC----CSCCCHHHHHHHS
T ss_pred HHHHHhcchHHHHHHHHHhccCcCccCCcCHHHHHHcC-----CEEEcChhhccCcchhhHHhhhcccccchhhhhHHhh
Confidence 975 35678888887653 5678999999999986 2359999999986432110 01 1223
Q ss_pred hCCCcEEEEecCCCCCCCCCC
Q psy2336 161 FGSKVKIIHFIGSSKPWLQHF 181 (222)
Q Consensus 161 ~~~~~~IiHf~g~~KPW~~~~ 181 (222)
...+++||||+|..|||...+
T Consensus 236 ~~~~~~iiHy~g~~KPW~~~~ 256 (311)
T 1g9r_A 236 TVMPVAVSHYCGPAKPWHRDC 256 (311)
T ss_dssp CCSSCSEEECCSSCCTTSSSC
T ss_pred ccCCCEEEEeCCcCCCCCCCC
Confidence 456889999999999999775
No 5
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=84.61 E-value=0.79 Score=36.80 Aligned_cols=53 Identities=17% Similarity=0.221 Sum_probs=32.0
Q ss_pred CCcceEEEEecCeeecCCChhhhCCC--------Cccccc----CCCCC-CcccceEEEEeCCHHHHHH
Q psy2336 50 TQYSKCVFLDADVLIVQNCDELFDRE--------ELSAAP----DAGWP-DCFNSGVFVFKPSESTYNA 105 (222)
Q Consensus 50 ~~ydrVLyLDaD~iv~~did~LF~~~--------~~aav~----d~~~~-~~fNsGvmli~~~~~~~~~ 105 (222)
.+-+-+-|||+|++|+ +.-|+++ +...+. +..|. ...|+|++++..+.-..++
T Consensus 71 PeAEWfWWLDsDAlIM---Dmnf~lPLe~yldl~~~NlvvHGw~e~~~~~~~lNtGvfL~~~~~~~irn 136 (213)
T 2p6w_A 71 PSTEWFLWLDSDVYVN---PKNKNKPITSFIDLSDPNILYHTFHEAPWGSYPINTGVKFVHKDALEIEK 136 (213)
T ss_dssp TTCSEEEEECTTEEEC---GGGTTSCGGGTCCCCCTTCCEEEECCTTTSSSSCCTTEEEEEGGGHHHHH
T ss_pred CCceEEEEecCCceee---cCCCCCcHHHccccccCceeeccccccccccccccceeeeecccchhhhh
Confidence 4789999999999998 2223333 111111 11121 3579999999876443333
No 6
>1o7q_A N-acetyllactosaminide alpha-1,3- galactosyltransferase; 3-galactosyltransferase-UDP complex, glycosyltransferase, glycoprotein, transmembrane; HET: GAL NAG UDP; 1.3A {Bos taurus} SCOP: c.68.1.9 PDB: 1gwv_A* 1gx0_A* 1gww_A* 1k4v_A* 1gx4_A* 2jco_A 1g8o_A* 1fg5_N* 1g93_A* 2wgz_A* 1o7o_A* 2vs4_A* 2jck_A* 2jcl_A 2vfz_A* 2vs3_A* 1vzu_A* 1vzx_A* 1vzt_A* 2jcj_A* ...
Probab=78.05 E-value=2.1 Score=36.25 Aligned_cols=94 Identities=18% Similarity=0.136 Sum_probs=54.4
Q ss_pred CcceEEEEecCeeecCCCh-hhhCCCCcccccC--------------------CCCC-----CcccceEEEEeCCH--HH
Q psy2336 51 QYSKCVFLDADVLIVQNCD-ELFDREELSAAPD--------------------AGWP-----DCFNSGVFVFKPSE--ST 102 (222)
Q Consensus 51 ~ydrVLyLDaD~iv~~did-~LF~~~~~aav~d--------------------~~~~-----~~fNsGvmli~~~~--~~ 102 (222)
+.|-+..+|+|+++.+++. |... ...|+.. +..| -|+.+|+.-=.+.+ +.
T Consensus 138 evDYLf~~dvd~~F~~~vG~E~Lg--~lv~~lHp~~y~~~~~~fpYERrp~S~AyIp~~eGdfYY~Ga~fGGt~~~vl~l 215 (289)
T 1o7q_A 138 EVDFLFCMDVDQVFQDKFGVETLG--ESVAQLQAWWYKADPNDFTYERRKESAAYIPFGEGDFYYHAAIFGGTPTQVLNI 215 (289)
T ss_dssp HCSEEEEECSSEEECSCBCGGGCS--SEEEEECTTTTTSCGGGSCCCCCTTSTTCCCTTCCSCCEEEEEEEECHHHHHHH
T ss_pred cCCEEEEeeCCcEeeccCCHHHHH--HHHHccCHHHhCCCCCCCCCCCCcCceeeecCCCCCEEEEceeeCCcHHHHHHH
Confidence 7899999999999999885 3321 1111110 1112 36667766444431 22
Q ss_pred H----HHHHHHHHHcCCCCCCchHHHHHHHhccccCCCCCCCCcccccccC
Q psy2336 103 Y----NALVEFALVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCST 149 (222)
Q Consensus 103 ~----~~l~~~~~~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~ 149 (222)
- +.+.....++-.-.+.|..-||.+|-.. ...+.||+.|+....
T Consensus 216 ~~~c~~~i~~D~~n~I~A~wHDESHLNKYf~~~---KPtKvLSPEY~wd~~ 263 (289)
T 1o7q_A 216 TQECFKGILKDKKNDIEAQWHDESHLNKYFLLN---KPTKILSPEYCWDYH 263 (289)
T ss_dssp HHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHS---CCSEEECGGGSBCGG
T ss_pred HHHHHHHHHHHHhCCeEEEecchhhhhHHHhhc---CCCEEECHHHCCCcc
Confidence 2 2232222222233567999999997532 234579999998654
No 7
>4ayl_A BOGT-metal-independent glycosyltransferase; histo-blood group enzyme; HET: EPE; 1.92A {Bacteroides ovatus} PDB: 4ayj_A*
Probab=52.33 E-value=24 Score=29.09 Aligned_cols=96 Identities=16% Similarity=0.141 Sum_probs=52.6
Q ss_pred CcceEEEEecCeeecCCCh-hhh-CCC--CcccccCC--------------------CCC-----CcccceEEEEeCCH-
Q psy2336 51 QYSKCVFLDADVLIVQNCD-ELF-DRE--ELSAAPDA--------------------GWP-----DCFNSGVFVFKPSE- 100 (222)
Q Consensus 51 ~ydrVLyLDaD~iv~~did-~LF-~~~--~~aav~d~--------------------~~~-----~~fNsGvmli~~~~- 100 (222)
+.|-+..+|+|+++.+++. |.. -.. ...|+..+ ..| -|+.+|+.-=.+.+
T Consensus 87 evDyLf~~dvd~~F~~~vG~E~L~p~~~~~lva~lHp~~y~~~~~~fpYERrp~S~AyIp~~eGdfYY~ga~fGG~~~~v 166 (246)
T 4ayl_A 87 ETDYLFFFNANLLFTSPIGKEILPPSDSNGLLGTMHPGFYNKPNSEFTYERRDASTAYIPEGEGRYYYAGGLSGGCTKAY 166 (246)
T ss_dssp HCSEEEEECTTEEECSCBCGGGSCCTTSCCEEEEBCGGGC------------------------CCCBCSSEEEEEHHHH
T ss_pred hCCEEEEEeCCceeeccCCHHHcccCCCCCEEEEechhhhCCCcccCcccCCccccccccCCCCCeEEeeeecCCcHHHH
Confidence 4799999999999999885 443 111 11111110 111 35666665444321
Q ss_pred -HHHHHHHHHH----HHcCCCCCCchHHHHHHHhccccCCCCCCCCcccccccC
Q psy2336 101 -STYNALVEFA----LVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCST 149 (222)
Q Consensus 101 -~~~~~l~~~~----~~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~~ 149 (222)
..-+.+...+ .++-.-.+.|..-||.+|-... ....||+.|+....
T Consensus 167 l~Lt~~c~~~i~~D~~n~I~A~whDESHLNKYfl~~K---P~~vLSPEY~wd~~ 217 (246)
T 4ayl_A 167 LKLCTTICSWVDRDATNHIIPIWHDESLINKYFLDNP---PAITLSPAYLYPEG 217 (246)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCSCCHHHHHHHHHHHSC---CSEEECGGGGEETT
T ss_pred HHHHHHHHHHHHHHHhCCceEeccchhHhHHHHHhCC---CCeeeCHHHcCCcc
Confidence 2222222222 2222335779999999987421 22359999987553
No 8
>3ioh_A Histo-blood group ABO system transferase; GTA, cisab mutant, AA(Gly)B, rossman fold, unliganded, conformation, blood group antigen, glycoprotein; HET: GOL; 1.25A {Homo sapiens} SCOP: c.68.1.9 PDB: 3ioi_A* 3ioj_A* 3u0y_A* 3u0x_A* 1zhj_A* 2o1h_A* 2o1g_A* 3sx5_A* 3sx3_A* 2o1f_A 2rj6_A* 2rj5_A* 2rj7_A* 1zi4_A* 2y7a_A* 3sxb_A* 3sxa_A* 2riz_A 2rj0_A* 2rj1_A* ...
Probab=42.59 E-value=18 Score=30.67 Aligned_cols=112 Identities=16% Similarity=0.079 Sum_probs=61.3
Q ss_pred CCCccc-hhhhhccCc-------cCCcceEEEEecCeeecCCCh-h-hhCC-----CCccccc------------CCCCC
Q psy2336 34 RPDLGI-TFTKIHAWR-------LTQYSKCVFLDADVLIVQNCD-E-LFDR-----EELSAAP------------DAGWP 86 (222)
Q Consensus 34 ~~~~~~-~~~Kl~i~~-------L~~ydrVLyLDaD~iv~~did-~-LF~~-----~~~aav~------------d~~~~ 86 (222)
..+|.. +..|+.+.+ +-+.|-+..+|+|+++.+++. | |-++ +..-..+ .+..|
T Consensus 122 ~~~Wqd~sm~Rm~~i~~~~~~~~~~EvDyLfc~dvd~~F~~~vG~E~Lg~lva~lHp~~y~~~~~~FpYERrp~S~AyIp 201 (298)
T 3ioh_A 122 YKRWQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFRDHVGVEILTPLFGTLHPGFYGSSREAFTYERRPQSQAYIP 201 (298)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTHHHHCSEEEEEESSEEECSCBCGGGCSSEEEEBCTTTTTSCGGGSCCCCCTTSTTCCC
T ss_pred ccCCccccHHHHHHHHHHHHHHHhhcCCEEEEecCCCeeccCccHHHhHhhHhhcChhhhcCCcccCcccCCcccccccc
Confidence 445553 455555543 126899999999999999874 2 2221 1110000 01111
Q ss_pred -----CcccceEEEEeCCH------HHHHHHHHHHHHcCCCCCCchHHHHHHHhccccCCCCCCCCccccccc
Q psy2336 87 -----DCFNSGVFVFKPSE------STYNALVEFALVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCS 148 (222)
Q Consensus 87 -----~~fNsGvmli~~~~------~~~~~l~~~~~~~~~~~~~DQ~iLN~~~~~~~~~~~~~~Lp~~yN~~~ 148 (222)
-|+.+|+.-=.+.+ ...+.+.....++-.-.+.|..=||.+|-.. ...+.||+.|+...
T Consensus 202 ~~eGdfYY~ga~fGGt~~~vl~Lt~~C~~~i~~D~~n~IeA~WhDESHLNKYfl~h---KPtKvLSPEY~Wd~ 271 (298)
T 3ioh_A 202 KDEGDFYYGGAFFGGSVQEVQRLTRACHQAMMVDQANGIEAVWHDESHLNKYLLRH---KPTKVLSPEYLWDQ 271 (298)
T ss_dssp TTCCSCCBCTTEEEEEHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHS---CCSEEECGGGSBCH
T ss_pred CCCCCeEEeeeecCCcHHHHHHHHHHHHHHHHHHHhCCceEeccchhhhhhhhhhc---CCCceeCHHHcCCc
Confidence 35666666444331 2222233222222233567999999998742 23468999998754
No 9
>1loi_A Cyclic 3',5'-AMP specific phosphodiesterase RD1; hydrolase, C-AMP phosphodiesterase; NMR {Rattus norvegicus} SCOP: j.51.1.1
Probab=34.04 E-value=16 Score=18.73 Aligned_cols=8 Identities=63% Similarity=1.182 Sum_probs=5.6
Q ss_pred CCCCCCCC
Q psy2336 173 SSKPWLQH 180 (222)
Q Consensus 173 ~~KPW~~~ 180 (222)
..|||..+
T Consensus 11 cskpwlvg 18 (26)
T 1loi_A 11 CSKPWLVG 18 (26)
T ss_dssp SSCTTGGG
T ss_pred cCCchhhh
Confidence 57888754
No 10
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=17.63 E-value=60 Score=25.94 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=15.8
Q ss_pred CCcceEEEEecCeeecC-CChhhh
Q psy2336 50 TQYSKCVFLDADVLIVQ-NCDELF 72 (222)
Q Consensus 50 ~~ydrVLyLDaD~iv~~-did~LF 72 (222)
.+|+.++++|||++.++ +.+.+.
T Consensus 52 ~~~dhllfIDAD~~~I~FdPe~V~ 75 (203)
T 2c0n_A 52 KDYDTLAFLDEDVVPIEIDFQKVE 75 (203)
T ss_dssp TTCCEEEEECTTEEEEECCHHHHH
T ss_pred CCCCEEEEEeCCCCccccCHHHHH
Confidence 47999999999955432 444433
Done!