RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy2336
(222 letters)
>gnl|CDD|133018 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 8 family and
initiates the biosynthesis of glycogen. Glycogenin
initiates the biosynthesis of glycogen by incorporating
glucose residues through a self-glucosylation reaction
at a Tyr residue, and then acts as substrate for chain
elongation by glycogen synthase and branching enzyme. It
contains a conserved DxD motif and an N-terminal
beta-alpha-beta Rossmann-like fold that are common to
the nucleotide-binding domains of most
glycosyltransferases. The DxD motif is essential for
coordination of the catalytic divalent cation, most
commonly Mn2+. Glycogenin can be classified as a
retaining glycosyltransferase, based on the relative
anomeric stereochemistry of the substrate and product in
the reaction catalyzed. It is placed in
glycosyltransferase family 8 which includes
lipopolysaccharide glucose and galactose transferases
and galactinol synthases.
Length = 240
Score = 239 bits (613), Expect = 2e-80
Identities = 96/202 (47%), Positives = 116/202 (57%), Gaps = 11/202 (5%)
Query: 6 NELLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIV 65
L +V V+EV+ D D NL L RP T+TK+ W LT+Y K VFLDAD L++
Sbjct: 46 EALEEVGWIVREVEPIDPPDSANL--LKRPRFKDTYTKLRLWNLTEYDKVVFLDADTLVL 103
Query: 66 QNCDELFDRE-ELSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFALVNGSFDGGDQGLL 124
+N DELFD E +AAPD GWPD FNSGVFV KPSE T+N L++ SFDGGDQGLL
Sbjct: 104 RNIDELFDLPGEFAAAPDCGWPDLFNSGVFVLKPSEETFNDLLDALQDTPSFDGGDQGLL 163
Query: 125 NLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIGSSKPWLQHFDST 184
N YFSD KRLPF YN Y + A FG ++K++HFIG KPW D
Sbjct: 164 NSYFSDRG---IWKRLPFTYNALKPLRYLHPEA-LWFGDEIKVVHFIGGDKPWSWWRDPE 219
Query: 185 TGAILSGDSHLTNFLQLWWDVF 206
T Q WWD++
Sbjct: 220 TKEKD----DYNELHQWWWDIY 237
>gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8. This
family includes enzymes that transfer sugar residues to
donor molecules. Members of this family are involved in
lipopolysaccharide biosynthesis and glycogen synthesis.
This family includes Lipopolysaccharide
galactosyltransferase, lipopolysaccharide
glucosyltransferase 1, and glycogenin
glucosyltransferase.
Length = 248
Score = 133 bits (338), Expect = 8e-39
Identities = 54/202 (26%), Positives = 83/202 (41%), Gaps = 34/202 (16%)
Query: 6 NELLKVFNFVKEVDVFDSRDET---NLRLLSRPDLGITFTKIHAWRL-TQYSKCVFLDAD 61
N L + V ++ D + LL + + + +++ L +Y K ++LDAD
Sbjct: 49 NALGSQVSEVDVLEFSDIEMLSYLTLQLLLKKYWSLLNYARLYLADLFPKYDKILYLDAD 108
Query: 62 VLIVQNCDELFDR--------------------EELSAAPDAGWPDCFNSGVFVFKPSES 101
++++ + DELFD E LSA P FN+GV V +
Sbjct: 109 IIVLGDLDELFDIDLGGKVAAAVEDFDRYPWFKEALSAELGIPPPCYFNAGVLVINLKKW 168
Query: 102 TYNALVEFALVNGSFDG-----GDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLP 156
L E + + +G GDQ +LN+ F K LP YN+ YSY
Sbjct: 169 REENLTEKLIEWLNKNGGLLKLGDQDILNIVF-----KGKVKPLPPRYNVHGLGYYSYKK 223
Query: 157 ALKQFGSKVKIIHFIGSSKPWL 178
K K+IH+IG +KPW
Sbjct: 224 RRKLIPENPKVIHYIGPTKPWH 245
>gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8
(GT-8) are involved in lipopolysaccharide biosynthesis
and glycogen synthesis. Members of this family are
involved in lipopolysaccharide biosynthesis and glycogen
synthesis. GT-8 comprises enzymes with a number of known
activities: lipopolysaccharide galactosyltransferase,
lipopolysaccharide glucosyltransferase 1, glycogenin
glucosyltransferase, and
N-acetylglucosaminyltransferase. GT-8 enzymes contains a
conserved DXD motif which is essential in the
coordination of a catalytic divalent cation, most
commonly Mn2+.
Length = 246
Score = 114 bits (288), Expect = 2e-31
Identities = 71/198 (35%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 8 LLKVFNFVKEVDVFDSRDETNLRLLSRPDLGITFTKIHAWRLTQ-YSKCVFLDADVLIVQ 66
L K++NF E+ D D + L RP +T TK+H L Y K +++DAD+L++
Sbjct: 51 LRKLYNFNYELIPVDILDSVDSEHLKRPIKIVTLTKLHLPNLVPDYDKILYVDADILVLT 110
Query: 67 NCDELFDR----EELSAAPDAGWP----------------DCFNSGVFVFKPSESTYNAL 106
+ DEL+D +EL+AAPD G D FNSGVFV S+ N L
Sbjct: 111 DIDELWDTPLGGQELAAAPDPGDRREGKYYRQKRSHLAGPDYFNSGVFVVNLSKERRNQL 170
Query: 107 -------VEFALVNGSFDGGDQGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALK 159
+L + S GGDQ LLN +F K LP I+N+ T Y L K
Sbjct: 171 LKVALEKWLQSLSSLS--GGDQDLLNTFFKQVP--FIVKSLPCIWNVRLTGCYRSLNCFK 226
Query: 160 QFGSKVKIIHFIGSSKPW 177
F K+IHF G +KPW
Sbjct: 227 AFVKNAKVIHFNGPTKPW 244
>gnl|CDD|215090 PLN00176, PLN00176, galactinol synthase.
Length = 333
Score = 67.4 bits (165), Expect = 3e-13
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 50/178 (28%)
Query: 39 ITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDRE----------------------- 75
I ++K+ W +YSK ++LD D+ + +N D LFD
Sbjct: 100 INYSKLRIWEFVEYSKMIYLDGDIQVFENIDHLFDLPDGYFYAVMDCFCEKTWSHTPQYK 159
Query: 76 ---------------ELSAAPDAGWPDCFNSGVFVFKPSESTYNALVEFALVNGSFDGGD 120
EL P P FN+G+FVF+PS STY L+E + +
Sbjct: 160 IGYCQQCPDKVTWPAELGPPP----PLYFNAGMFVFEPSLSTYEDLLETLKITPPTPFAE 215
Query: 121 QGLLNLYFSDWATADSSKRLPFIYNMCSTSTYSYLPALKQFGSKVKIIHFIGS-SKPW 177
Q LN++F D K +P +YN+ + + P + KVK++H+ + SKPW
Sbjct: 216 QDFLNMFFR-----DIYKPIPPVYNLVLAMLWRH-PENVEL-DKVKVVHYCAAGSKPW 266
>gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the
addition of galactose or glucose residues to the
lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of
the bacterial cell surface. The members of this family
of glycosyltransferases catalyze the addition of
galactose or glucose residues to the lipooligosaccharide
(LOS) or lipopolysaccharide (LPS) of the bacterial cell
surface. The enzymes exhibit broad substrate
specificities. The known functions found in this family
include: Alpha-1,4-galactosyltransferase,
LOS-alpha-1,3-D-galactosyltransferase,
UDP-glucose:(galactosyl) LPS
alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl)
LPS alpha1,2-galactosyltransferase, and
UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase.
Alpha-1,4-galactosyltransferase from N. meningitidis
adds an alpha-galactose from UDP-Gal (the donor) to a
terminal lactose (the acceptor) of the LOS structure of
outer membrane. LOSs are virulence factors that enable
the organism to evade the immune system of host cells.
In E. coli, the three alpha-1,2-glycosyltransferases,
that are involved in the synthesis of the outer core
region of the LPS, are all members of this family. The
three enzymes share 40 % of sequence identity, but have
different sugar donor or acceptor specificities,
representing the structural diversity of LPS.
Length = 248
Score = 61.8 bits (151), Expect = 1e-11
Identities = 44/163 (26%), Positives = 61/163 (37%), Gaps = 43/163 (26%)
Query: 49 LTQYSKCVFLDADVLIVQNCDELFDRE----ELSAAPDAGWPDC---------------F 89
L Y K ++LDAD++++ + ELFD + L+A D F
Sbjct: 93 LPDYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKKRKRRLGGYDDGSYF 152
Query: 90 NSGVFVF------KPSESTYNALVEFALVNGSFDG-GDQGLLNLYFSD-WATADSSKRLP 141
NSGV + + E+ L+E G DQ +LN D LP
Sbjct: 153 NSGVLLINLKKWRE--ENITEKLLELIKEYGGRLIYPDQDILNAVLKDKI------LYLP 204
Query: 142 FIYNMCSTSTYSYLPA-------LKQFGSKVKIIHFIGSSKPW 177
YN T Y L L++ IIH+ GS KPW
Sbjct: 205 PRYNFQ-TGFYYLLKKKSKEEQELEEARKNPVIIHYTGSDKPW 246
>gnl|CDD|133064 cd06914, GT8_GNT1, GNT1 is a fungal enzyme that belongs to the GT 8
family. N-acetylglucosaminyltransferase is a fungal
enzyme that catalyzes the addition of
N-acetyl-D-glucosamine to mannotetraose side chains by
an alpha 1-2 linkage during the synthesis of mannan. The
N-acetyl-D-glucosamine moiety in mannan plays a role in
the attachment of mannan to asparagine residues in
proteins. The mannotetraose and its
N-acetyl-D-glucosamine derivative side chains of mannan
are the principle immunochemical determinants on the
cell surface. N-acetylglucosaminyltransferase is a
member of glycosyltransferase family 8, which are,
based on the relative anomeric stereochemistry of the
substrate and product in the reaction catalyzed,
retaining glycosyltransferases.
Length = 278
Score = 54.7 bits (132), Expect = 5e-09
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 41 FTKIHAWRLTQYSKCVFLDADVLIVQNCDELFD-REELS-AAPDAGWPDCFNSGVFVFKP 98
TK+ A+ T+Y + ++ D+D +I DELF + AAP A W F S + V KP
Sbjct: 81 LTKLRAFNQTEYDRIIYFDSDSIIRHPMDELFFLPNYIKFAAPRAYWK--FASHLMVIKP 138
Query: 99 SESTYNALVEFALVNGSFDGG--DQGLLNLYFSD 130
S+ + L+ L D L+N F +
Sbjct: 139 SKEAFKELMTEILPAYLNKKNEYDMDLINEEFYN 172
>gnl|CDD|227884 COG5597, COG5597, Alpha-N-acetylglucosamine transferase [Cell
envelope biogenesis, outer membrane].
Length = 368
Score = 50.3 bits (120), Expect = 2e-07
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 41 FTKIHAWRLTQYSKCVFLDADVLIVQNCDELFD--REELSAAPDA-GWPDCF---NSGVF 94
FTK+ + T+Y + +FLD+D ++++N D+LFD E +AAPD P F NSG+F
Sbjct: 157 FTKLRVFEQTEYDRVIFLDSDAIVLKNMDKLFDYPVYEFAAAPDVYESPADFHRPNSGIF 216
Query: 95 V-FKPSESTYNA-LVEFALVNGSFDGGDQGLLNLYFSDW 131
V F P+ + Y + DQ L+ D+
Sbjct: 217 VSFTPAFAAYGKMRAALYAPYLFWARTDQTFLHSTPPDF 255
>gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins,
LPS:glycosyltransferases [Cell envelope biogenesis,
outer membrane].
Length = 325
Score = 41.9 bits (99), Expect = 1e-04
Identities = 41/169 (24%), Positives = 56/169 (33%), Gaps = 47/169 (27%)
Query: 49 LTQYSKCVFLDADVLIVQNCDELFDREE----LSAAPDAGWPDC---------------- 88
QY K ++LD DV+ + ELF + L+A D
Sbjct: 95 FPQYDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYMKEGALRLEKGDLEGSY 154
Query: 89 FNSGVFVF--------KPSESTYNALVEFALVNGSFDGGDQGLLNLYFSDWATADSSKRL 140
FN+GV + E L + DQ +LN+ F D L
Sbjct: 155 FNAGVLLINLKLWREENIFEKLIELLKDK---ENDLLYPDQDILNMIFEDRV-----LEL 206
Query: 141 PFIYNMCST-----STYSYLPALKQFGSKVKIIHFIGSSKPWLQHFDST 184
P YN P FG I+H+ G +KPW H DS+
Sbjct: 207 PIRYNAIPYIDSQLKDKYIYP----FGDDPVILHYAGPTKPW--HSDSS 249
>gnl|CDD|217816 pfam03959, FSH1, Serine hydrolase (FSH1). This is a family of
serine hydrolases.
Length = 209
Score = 28.4 bits (64), Expect = 2.1
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 11/84 (13%)
Query: 43 KIHAWR--LTQYSKCVFLDADVLIVQNCDELFDREELSAAPDA----GW--PDCFNSGVF 94
K A R L + + V+LDA + + D F+ + D W D +
Sbjct: 23 KTGALRKLLKKGVELVYLDAPFPLAEKADLPFEESDAEEGEDDEPYRAWFFGDDDTNEYR 82
Query: 95 VFKPSESTYNALVEFALVNGSFDG 118
+ + + + ++ NG FDG
Sbjct: 83 GL---DESLDYVRDYIKENGPFDG 103
>gnl|CDD|224471 COG1554, ATH1, Trehalose and maltose hydrolases (possible
phosphorylases) [Carbohydrate transport and metabolism].
Length = 772
Score = 28.8 bits (65), Expect = 2.8
Identities = 10/48 (20%), Positives = 17/48 (35%)
Query: 34 RPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDREELSAAP 81
R L +T +I W D ++ ++ D D EE+
Sbjct: 528 REKLNVTTEEIEKWADIAKKMYYPEDEELGVIAQFDGFLDLEEIDLDA 575
>gnl|CDD|220956 pfam11051, Mannosyl_trans3, Mannosyltransferase putative. This
family is conserved in fungi. Several members are
annotated as being alpha-1,3-mannosyltransferase but
this could not be confirmed.
Length = 263
Score = 28.3 bits (64), Expect = 2.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 56 VFLDADVLIVQNCDELFDREE 76
+ LDAD + + N D LF+ E
Sbjct: 94 LLLDADNVPLVNPDYLFESEP 114
>gnl|CDD|233552 TIGR01736, FGAM_synth_II, phosphoribosylformylglycinamidine
synthase II. Phosphoribosylformylglycinamidine synthase
is a single, long polypeptide in most Proteobacteria and
eukarotes. Three proteins are required in Bacillus
subtilis and many other species. This is the longest of
the three and is designated PurL,
phosphoribosylformylglycinamidine synthase II, or FGAM
synthase II [Purines, pyrimidines, nucleosides, and
nucleotides, Purine ribonucleotide biosynthesis].
Length = 715
Score = 28.4 bits (64), Expect = 3.2
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 173 SSKPWLQHFDSTTGAILSG---DSHLTNFLQLWWDVFVV--HVHP 212
SSK L+ F + ++ G D+ + + + VF + H HP
Sbjct: 37 SSKKLLKQFPTKGPNVIQGPGEDAGVVDIGDGYAVVFKMESHNHP 81
>gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A)
includes diverse families of glycosyl transferases with
a common GT-A type structural fold.
Glycosyltransferases (GTs) are enzymes that synthesize
oligosaccharides, polysaccharides, and glycoconjugates
by transferring the sugar moiety from an activated
nucleotide-sugar donor to an acceptor molecule, which
may be a growing oligosaccharide, a lipid, or a protein.
Based on the stereochemistry of the donor and acceptor
molecules, GTs are classified as either retaining or
inverting enzymes. To date, all GT structures adopt one
of two possible folds, termed GT-A fold and GT-B fold.
This hierarchy includes diverse families of glycosyl
transferases with a common GT-A type structural fold,
which has two tightly associated beta/alpha/beta domains
that tend to form a continuous central sheet of at least
eight beta-strands. The majority of the proteins in this
superfamily are Glycosyltransferase family 2 (GT-2)
proteins. But it also includes families GT-43, GT-6,
GT-8, GT13 and GT-7; which are evolutionarily related to
GT-2 and share structure similarities.
Length = 156
Score = 27.5 bits (61), Expect = 4.1
Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 21 FDSRDETNLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQNCDELFDREELSAA 80
+ +D +R+++ + G+ + + + +FLDAD L++ + E E L+
Sbjct: 47 YAKKDPRVIRVINEENQGLAAARNAGLKAARGEYILFLDADDLLLPDWLERLVAELLADP 106
Query: 81 PDAGWPDCFNSGVFVFKPS 99
G +F+
Sbjct: 107 EADA---VGGPGNLLFRRE 122
>gnl|CDD|223435 COG0358, DnaG, DNA primase (bacterial type) [DNA replication,
recombination, and repair].
Length = 568
Score = 28.2 bits (63), Expect = 4.3
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Query: 37 LGITFTKIHAWRLTQYSKCV--FLDAD 61
LG T+ H L++ K V D D
Sbjct: 274 LGTALTEEHIKLLSRGKKKVILCFDGD 300
>gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase,
synthetase domain [Nucleotide transport and metabolism].
Length = 743
Score = 28.0 bits (63), Expect = 4.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 173 SSKPWLQHFDSTTGA--ILSG---DSHLTNFLQLWWDVFVV--HVHPT 213
SSK L+ F +T +LSG ++ + + W VF V H HP+
Sbjct: 61 SSKSLLKMFPTTHTGEYVLSGPGDNAGVVDIGDGWAVVFKVESHNHPS 108
>gnl|CDD|185282 PRK15384, PRK15384, type III secretion system protein; Provisional.
Length = 336
Score = 27.7 bits (61), Expect = 4.8
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 28 NLRLLSRPDLGITFTKIHAWRLTQYSKCVFLDADVLIVQ 66
N+ +L L + K+ + L+ S C++LDAD++I +
Sbjct: 192 NMAMLKAGQLFLEADKVGCYDLSTNSGCIYLDADMIITE 230
>gnl|CDD|223484 COG0407, HemE, Uroporphyrinogen-III decarboxylase [Coenzyme
metabolism].
Length = 352
Score = 27.6 bits (62), Expect = 5.1
Identities = 9/37 (24%), Positives = 15/37 (40%)
Query: 158 LKQFGSKVKIIHFIGSSKPWLQHFDSTTGAILSGDSH 194
+K+ V +IHF + L+ T +L D
Sbjct: 236 VKEVKGGVPVIHFCKGAGHLLEDMAKTGFDVLGVDWR 272
>gnl|CDD|238572 cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and
plants are enzymes with high specificity for fructose,
as are all FRKs, but they catalyzes the conversion of
fructose to fructose-6-phosphate, which is an entry
point into glycolysis via conversion into
glucose-6-phosphate. This is in contrast to FRKs [or
ketohexokinases (KHKs)] from mammalia and halophilic
archaebacteria, which phosphorylate fructose to
fructose-1-phosphate.
Length = 295
Score = 27.6 bits (62), Expect = 5.2
Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 5/53 (9%)
Query: 69 DELFDREELSAAPD-AGWPDCFNSGVFVFKPSESTYNALVEFALVNG---SFD 117
D L D E A F S +PS S L+E A G SFD
Sbjct: 106 DLLLDTELNPDLLSEADIL-HFGSIALASEPSRSALLELLEAAKKAGVLISFD 157
>gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase.
Length = 533
Score = 27.6 bits (61), Expect = 5.3
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 164 KVKIIHFIGSSKPWLQ 179
K +IH+ G SKPWL+
Sbjct: 489 KAAVIHYNGQSKPWLE 504
>gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with
unknown function. A subfamily of glycosyltransferase
family 8 with unknown function: Glycosyltransferase
family 8 comprises enzymes with a number of known
activities; lipopolysaccharide galactosyltransferase
lipopolysaccharide glucosyltransferase 1, glycogenin
glucosyltransferase and inositol
1-alpha-galactosyltransferase. It is classified as a
retaining glycosyltransferase, based on the relative
anomeric stereochemistry of the substrate and product in
the reaction catalyzed.
Length = 257
Score = 27.4 bits (61), Expect = 5.9
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 54 KCVFLDADVLIVQNCDELFDREELSAAPDAGWPDCFNSGVFVF 96
K ++LD DV++ ++ EL++ +L +N GV V
Sbjct: 116 KVIYLDDDVVVQKDLTELWN-TDLGGGVAGAVETSWNPGVNVV 157
>gnl|CDD|226904 COG4521, TauA, ABC-type taurine transport system, periplasmic
component [Inorganic ion transport and metabolism].
Length = 334
Score = 27.5 bits (61), Expect = 6.4
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 7/31 (22%)
Query: 141 PFIYNMCSTSTYSYLPALKQFG---SKVKII 168
PF+ ST+ YS L ALK +G +V+I+
Sbjct: 136 PFV----STTHYSLLAALKHWGIDPGQVEIL 162
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.324 0.138 0.439
Gapped
Lambda K H
0.267 0.0781 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 11,405,431
Number of extensions: 1047854
Number of successful extensions: 1057
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1041
Number of HSP's successfully gapped: 35
Length of query: 222
Length of database: 10,937,602
Length adjustment: 93
Effective length of query: 129
Effective length of database: 6,812,680
Effective search space: 878835720
Effective search space used: 878835720
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (25.6 bits)