Query psy2339
Match_columns 125
No_of_seqs 129 out of 1255
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 22:04:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kxq_A E3 ubiquitin-protein li 100.0 3.6E-29 1.2E-33 162.6 11.0 82 25-106 8-89 (90)
2 1tk7_A CG4244-PB; WW domain, n 100.0 4.7E-29 1.6E-33 161.4 8.0 83 20-104 6-88 (88)
3 1o6w_A PRP40, PRE-mRNA process 99.9 4.8E-24 1.7E-28 133.8 0.6 72 29-105 2-73 (75)
4 2l5f_A PRE-mRNA-processing fac 99.9 4.7E-23 1.6E-27 134.2 4.2 77 25-106 10-86 (92)
5 2jxw_A WW domain-binding prote 99.8 4.5E-21 1.5E-25 120.4 8.6 70 29-103 5-74 (75)
6 2dwv_A Salvador homolog 1 prot 99.8 1.5E-18 5E-23 100.5 5.7 46 49-105 1-46 (49)
7 3l4h_A E3 ubiquitin-protein li 99.7 2.8E-19 9.5E-24 118.8 -0.7 62 27-107 46-107 (109)
8 2law_A Yorkie homolog; YAP, SM 99.6 1.7E-16 5.7E-21 87.3 4.7 35 70-104 4-38 (38)
9 2djy_A SMAD ubiquitination reg 99.6 4.3E-16 1.5E-20 87.4 5.7 38 69-106 4-41 (42)
10 2ysd_A Membrane-associated gua 99.6 1.2E-15 4E-20 90.8 7.5 50 20-76 8-57 (57)
11 2ysf_A E3 ubiquitin-protein li 99.6 7E-16 2.4E-20 85.7 5.2 36 70-105 5-40 (40)
12 2ez5_W Dnedd4, E3 ubiquitin-pr 99.6 1.2E-15 4E-20 87.2 6.0 38 70-107 8-45 (46)
13 2ysb_A Salvador homolog 1 prot 99.6 1.5E-15 5.2E-20 87.8 6.6 40 70-109 9-48 (49)
14 1wr3_A Ubiquitin-protein ligas 99.6 6.5E-16 2.2E-20 83.8 4.7 34 71-104 3-36 (36)
15 2ysg_A Syntaxin-binding protei 99.6 8.3E-16 2.8E-20 85.4 5.0 36 70-105 5-40 (40)
16 2kpz_A E3 ubiquitin-protein li 99.6 7.2E-16 2.5E-20 89.2 4.8 40 69-108 9-48 (49)
17 2kyk_A E3 ubiquitin-protein li 99.6 1.1E-15 3.9E-20 84.3 5.2 36 70-105 4-39 (39)
18 1wr7_A NEDD4-2; all-beta, liga 99.6 8.9E-16 3E-20 85.7 4.6 36 70-105 6-41 (41)
19 2l4j_A YES-associated protein 99.6 2.2E-15 7.6E-20 86.0 6.1 37 69-105 8-44 (46)
20 2zaj_A Membrane-associated gua 99.6 1.7E-15 5.7E-20 87.6 5.2 37 69-105 10-46 (49)
21 1i5h_W Rnedd4, ubiquitin ligas 99.6 2.7E-15 9.1E-20 87.1 6.1 39 69-107 8-46 (50)
22 2jmf_A E3 ubiquitin-protein li 99.6 2.2E-15 7.4E-20 88.4 5.4 38 69-106 15-52 (53)
23 2ysd_A Membrane-associated gua 99.6 4.4E-15 1.5E-19 88.3 6.7 39 69-107 11-49 (57)
24 1wmv_A WWOX, WW domain contain 99.6 3.1E-15 1.1E-19 88.1 5.8 41 70-110 9-49 (54)
25 1wr4_A Ubiquitin-protein ligas 99.6 3.1E-15 1.1E-19 81.0 5.0 34 71-104 3-36 (36)
26 2zaj_A Membrane-associated gua 99.6 3.8E-15 1.3E-19 86.1 5.6 44 16-59 3-46 (49)
27 2ez5_W Dnedd4, E3 ubiquitin-pr 99.6 5.7E-15 1.9E-19 84.3 6.1 36 25-60 9-44 (46)
28 2djy_A SMAD ubiquitination reg 99.6 5.5E-15 1.9E-19 82.8 5.2 37 23-59 4-40 (42)
29 1i5h_W Rnedd4, ubiquitin ligas 99.6 8.1E-15 2.8E-19 85.0 5.9 41 20-60 5-45 (50)
30 2ysg_A Syntaxin-binding protei 99.6 6.8E-15 2.3E-19 81.6 5.3 34 25-58 6-39 (40)
31 2law_A Yorkie homolog; YAP, SM 99.5 3.1E-15 1.1E-19 82.1 3.8 34 25-58 5-38 (38)
32 1e0m_A Wwprototype; SH3 protot 99.5 5.2E-15 1.8E-19 80.6 4.7 35 71-105 2-36 (37)
33 2ysb_A Salvador homolog 1 prot 99.5 1.3E-14 4.4E-19 83.9 6.5 37 25-61 10-46 (49)
34 2dmv_A Itchy homolog E3 ubiqui 99.5 6.7E-15 2.3E-19 82.8 5.1 36 70-105 5-40 (43)
35 2ysf_A E3 ubiquitin-protein li 99.5 1.4E-14 4.7E-19 80.4 5.7 34 25-58 6-39 (40)
36 2kyk_A E3 ubiquitin-protein li 99.5 1.3E-14 4.4E-19 80.0 5.1 35 24-58 4-38 (39)
37 2kpz_A E3 ubiquitin-protein li 99.5 9.5E-15 3.3E-19 84.4 4.7 38 23-60 9-46 (49)
38 1wr3_A Ubiquitin-protein ligas 99.5 1.1E-14 3.8E-19 78.9 4.7 34 25-58 3-36 (36)
39 2l4j_A YES-associated protein 99.5 2.3E-14 7.8E-19 81.8 5.7 36 24-59 9-44 (46)
40 1wr7_A NEDD4-2; all-beta, liga 99.5 1.3E-14 4.5E-19 80.8 4.5 34 25-58 7-40 (41)
41 2yse_A Membrane-associated gua 99.5 1.4E-14 4.9E-19 86.9 4.4 44 16-59 3-46 (60)
42 2jmf_A E3 ubiquitin-protein li 99.5 2.8E-14 9.4E-19 83.7 5.3 37 24-60 16-52 (53)
43 1ymz_A CC45; artificial protei 99.5 2.4E-14 8.3E-19 80.5 4.8 35 71-105 7-41 (43)
44 2yse_A Membrane-associated gua 99.5 1.2E-14 4E-19 87.3 3.5 37 69-105 10-46 (60)
45 1wr4_A Ubiquitin-protein ligas 99.5 3.7E-14 1.3E-18 76.7 4.8 34 25-58 3-36 (36)
46 2ysh_A GAS-7, growth-arrest-sp 99.5 5.7E-14 2E-18 77.8 5.4 34 71-104 6-39 (40)
47 2ho2_A Fe65 protein, amyloid b 99.5 4.5E-14 1.5E-18 77.4 4.7 34 71-105 2-35 (38)
48 2dmv_A Itchy homolog E3 ubiqui 99.5 7.3E-14 2.5E-18 78.5 5.4 35 25-59 6-40 (43)
49 1e0m_A Wwprototype; SH3 protot 99.5 6.8E-14 2.3E-18 76.1 4.8 35 25-59 2-36 (37)
50 1wmv_A WWOX, WW domain contain 99.5 1.9E-13 6.3E-18 80.5 6.9 39 24-62 9-47 (54)
51 2ysh_A GAS-7, growth-arrest-sp 99.4 2.3E-13 8E-18 75.3 5.5 34 25-58 6-39 (40)
52 1ymz_A CC45; artificial protei 99.4 1.7E-13 5.8E-18 77.0 5.0 37 23-59 5-41 (43)
53 2dwv_A Salvador homolog 1 prot 99.4 1.6E-13 5.5E-18 79.2 4.8 35 25-59 12-46 (49)
54 1jmq_A YAP65, 65 kDa YES-assoc 99.4 1.4E-13 4.8E-18 78.4 3.9 36 71-106 7-42 (46)
55 2ysc_A Amyloid beta A4 precurs 99.4 4.4E-13 1.5E-17 73.8 4.5 33 70-103 6-38 (39)
56 2ho2_A Fe65 protein, amyloid b 99.4 8.8E-13 3E-17 72.2 4.6 33 26-59 3-35 (38)
57 2jv4_A Peptidyl-prolyl CIS/tra 99.3 2.1E-12 7.2E-17 75.9 5.6 35 71-105 6-41 (54)
58 2ysc_A Amyloid beta A4 precurs 99.3 1.5E-12 5.1E-17 71.7 4.3 32 25-57 7-38 (39)
59 2jv4_A Peptidyl-prolyl CIS/tra 99.3 2.3E-12 7.8E-17 75.7 5.1 35 25-59 6-41 (54)
60 3l4h_A E3 ubiquitin-protein li 99.3 3.3E-12 1.1E-16 84.8 5.6 37 24-60 70-106 (109)
61 1tk7_A CG4244-PB; WW domain, n 99.3 3.9E-12 1.3E-16 81.7 5.4 38 69-106 9-46 (88)
62 1jmq_A YAP65, 65 kDa YES-assoc 99.3 1.5E-12 5.2E-17 74.0 3.0 36 25-60 7-42 (46)
63 2kxq_A E3 ubiquitin-protein li 99.3 6.3E-12 2.1E-16 81.0 6.1 37 71-107 8-44 (90)
64 2e45_A Fe65 protein, amyloid b 99.2 1E-11 3.5E-16 72.5 4.8 36 69-105 16-51 (55)
65 2jx8_A Hpcif1, phosphorylated 99.2 1.2E-11 4.2E-16 72.0 3.6 35 71-105 9-44 (52)
66 2e45_A Fe65 protein, amyloid b 99.2 5.1E-11 1.7E-15 69.5 5.1 36 23-59 16-51 (55)
67 3olm_A E3 ubiquitin-protein li 99.1 7.9E-11 2.7E-15 94.6 4.2 45 69-113 5-49 (429)
68 2ysi_A Transcription elongatio 99.1 2.7E-10 9.1E-15 62.9 5.0 33 71-103 6-38 (40)
69 1eg3_A Dystrophin; EF-hand lik 99.0 5.5E-11 1.9E-15 89.9 2.7 36 71-106 10-45 (261)
70 2jx8_A Hpcif1, phosphorylated 99.0 2.6E-11 9E-16 70.6 0.4 35 25-59 9-44 (52)
71 1o6w_A PRP40, PRE-mRNA process 99.0 9.2E-11 3.2E-15 72.9 2.4 56 4-59 9-73 (75)
72 2ysi_A Transcription elongatio 99.0 7.1E-10 2.4E-14 61.2 5.4 34 25-58 6-39 (40)
73 1ywi_A Formin-binding protein 99.0 3E-10 1E-14 63.0 3.3 33 71-103 8-40 (41)
74 3tc5_A Peptidyl-prolyl CIS-tra 99.0 3.3E-10 1.1E-14 80.4 4.2 36 25-60 8-44 (166)
75 3tc5_A Peptidyl-prolyl CIS-tra 99.0 3.8E-10 1.3E-14 80.1 4.2 37 70-106 7-44 (166)
76 1eg3_A Dystrophin; EF-hand lik 99.0 2.2E-10 7.7E-15 86.6 3.1 34 25-58 10-43 (261)
77 2l5f_A PRE-mRNA-processing fac 99.0 5.1E-10 1.7E-14 72.3 4.3 36 70-105 9-44 (92)
78 1e0l_A Formin binding protein; 99.0 1.3E-09 4.4E-14 59.1 4.9 32 73-104 4-35 (37)
79 3olm_A E3 ubiquitin-protein li 98.9 4.1E-10 1.4E-14 90.4 3.9 40 22-61 4-43 (429)
80 1e0l_A Formin binding protein; 98.9 2.2E-09 7.4E-14 58.2 4.9 33 27-59 4-36 (37)
81 1ywi_A Formin-binding protein 98.9 8.5E-10 2.9E-14 61.2 3.2 33 25-57 8-40 (41)
82 2jxw_A WW domain-binding prote 98.8 5.9E-09 2E-13 64.8 5.3 35 23-57 40-74 (75)
83 1e0n_A Hypothetical protein; Y 98.8 6E-09 2E-13 52.7 3.6 27 75-102 1-27 (27)
84 1e0n_A Hypothetical protein; Y 98.7 1.7E-08 5.7E-13 51.0 3.2 27 29-56 1-27 (27)
85 2dk7_A Transcription elongatio 98.3 4.8E-07 1.6E-11 55.7 3.7 32 75-106 20-51 (73)
86 2dk7_A Transcription elongatio 98.3 5.4E-07 1.9E-11 55.4 3.7 32 30-61 21-52 (73)
87 2dk1_A WW domain-binding prote 98.3 3.1E-07 1.1E-11 52.8 2.0 31 75-105 7-37 (50)
88 2dk1_A WW domain-binding prote 98.2 8.2E-07 2.8E-11 51.0 3.0 32 29-60 7-38 (50)
89 1yw5_A Peptidyl prolyl CIS/tra 97.5 0.00012 4.1E-09 51.9 5.2 34 25-58 6-40 (177)
90 1yw5_A Peptidyl prolyl CIS/tra 97.4 0.00021 7.2E-09 50.6 4.9 33 71-103 6-39 (177)
91 3le4_A Microprocessor complex 96.6 0.0044 1.5E-07 37.9 5.1 37 68-104 24-60 (79)
92 3le4_A Microprocessor complex 96.1 0.012 4E-07 36.0 4.9 37 23-59 25-61 (79)
93 1ub1_A MECP2, attachment regio 74.8 5.3 0.00018 26.8 4.7 24 25-48 36-67 (133)
94 1d9n_A Methyl-CPG-binding prot 74.6 3.9 0.00013 24.7 3.6 33 71-104 9-49 (75)
95 1ub1_A MECP2, attachment regio 72.6 7.3 0.00025 26.2 4.9 27 69-95 34-68 (133)
96 2ky8_A Methyl-CPG-binding doma 71.6 3.8 0.00013 24.5 3.1 25 71-95 11-43 (72)
97 3c2i_A Methyl-CPG-binding prot 71.4 5.8 0.0002 25.2 4.0 30 70-100 21-58 (97)
98 3vxv_A Methyl-CPG-binding doma 70.9 4.5 0.00015 24.0 3.3 24 25-48 4-35 (69)
99 1h8g_A Major autolysin; cholin 40.6 37 0.0013 20.8 3.8 18 27-47 14-31 (95)
100 2be1_A Serine/threonine-protei 38.7 53 0.0018 24.9 5.2 61 36-99 17-81 (339)
101 3q7m_A Lipoprotein YFGL, BAMB; 38.2 57 0.0019 23.7 5.2 60 38-102 286-345 (376)
102 3q7m_A Lipoprotein YFGL, BAMB; 34.4 47 0.0016 24.1 4.2 62 36-103 110-171 (376)
103 3hia_A Choline binding protein 32.5 66 0.0022 19.6 4.0 18 27-47 14-31 (94)
104 1hcx_A Major autolysin; cholin 24.5 87 0.003 20.1 3.7 9 84-92 74-82 (127)
105 2rp4_A Transcription factor P5 22.8 50 0.0017 19.7 2.0 17 25-41 6-22 (76)
106 2khr_A Protein MBTH; sideropho 20.8 1.4E+02 0.0049 17.7 4.0 29 44-86 20-48 (74)
No 1
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.96 E-value=3.6e-29 Score=162.57 Aligned_cols=82 Identities=41% Similarity=0.938 Sum_probs=70.5
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
.+||+||+++++.+||+||+||+|++|+|++|+..............+||.|||+++|.+|++|||||.|++|+|++||+
T Consensus 8 ~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~~~~~~~~~~~~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~w~~Pr~ 87 (90)
T 2kxq_A 8 PDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRL 87 (90)
T ss_dssp CSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSCSSSCSCCGGGTCCCCSSCCEEECTTSCEEEEETTTTEEESSCTTT
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCeEeeecccccccccccCcccccccCCCceEEECCCCCEEEEECCCCcEecCCCCc
Confidence 56999999999999999999999999999999876432211122345899999999999999999999999999999998
Q ss_pred CC
Q psy2339 105 PR 106 (125)
Q Consensus 105 ~~ 106 (125)
+.
T Consensus 88 ~~ 89 (90)
T 2kxq_A 88 SA 89 (90)
T ss_dssp SC
T ss_pred CC
Confidence 63
No 2
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.96 E-value=4.7e-29 Score=161.43 Aligned_cols=83 Identities=45% Similarity=0.896 Sum_probs=71.0
Q ss_pred CCCCCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeC
Q psy2339 20 SPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSW 99 (125)
Q Consensus 20 ~~~~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w 99 (125)
..+..++||+||+++++.+||+||+||+|++|+|++|+...... ......+||.||+++++.+|++|||||.|++|+|
T Consensus 6 ~~~~~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~~~~--~~~~~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw 83 (88)
T 1tk7_A 6 HMDALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEV--SLINEGPLPPGWEIRYTAAGERFFVDHNTRRTTF 83 (88)
T ss_dssp CSSTTSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCTTTCC--HHHHSCSSCSSCEEEEETTTEEEEEETTTTEEES
T ss_pred CCCccCCCCCCcEEEECCCCCEEEEECCCCCeEeeccccccccc--ccccccccCCceEEEECCCCCEEEEECCCCcEeC
Confidence 34556789999999999999999999999999999999864321 0012357999999999999999999999999999
Q ss_pred CCCCC
Q psy2339 100 FDPRI 104 (125)
Q Consensus 100 ~~Pr~ 104 (125)
++|||
T Consensus 84 ~~Prl 88 (88)
T 1tk7_A 84 EDPRP 88 (88)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 99996
No 3
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=99.87 E-value=4.8e-24 Score=133.84 Aligned_cols=72 Identities=35% Similarity=0.628 Sum_probs=62.4
Q ss_pred CCcEEEECCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 29 EGWDMATTAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 29 ~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
++|+++++++|++||+|++|++++|++|....... ....||.||+++.+.+|++|||||.|++|+|++|++.
T Consensus 2 ~~W~~~~~~~Gr~YY~n~~T~~s~W~~P~~~~~~~-----~~~~lp~gW~~~~~~~Gr~Yy~n~~t~~t~W~~P~~~ 73 (75)
T 1o6w_A 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQE-----ELLLRENGWKAAKTADGKVYYYNPTTRETSWTIPAFE 73 (75)
T ss_dssp CCEEEEECTTCCEEEEETTTTEEESSCCHHHHHHH-----HHHHHHHTCEEEECTTCCEEEEETTTTEEESSCCCCC
T ss_pred CCCeEEECCCCCeEEEECCCCCEEeecchhhcccc-----cccCCCCeEEEEECCCCCEEEEECCCCCEECCCCCCC
Confidence 58999999999999999999999999997642210 1134889999999999999999999999999999985
No 4
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=99.87 E-value=4.7e-23 Score=134.18 Aligned_cols=77 Identities=22% Similarity=0.462 Sum_probs=66.2
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
.+||.+|+++++++||+||+|+.|++++|++|....... ....||.+|+++.+.+|++||+|+.|++|+|++|+.
T Consensus 10 ~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~~~~~-----e~~~~~~~W~~~~~~~Gr~Yy~N~~T~~s~We~P~~ 84 (92)
T 2l5f_A 10 SGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPA-----EQLLSKCPWKEYKSDSGKTYYYNSQTKESRWAKPKE 84 (92)
T ss_dssp TBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGGTCHH-----HHHHHSCSEEEEECTTCCEEEEETTTTEEESCCCHH
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCceecccCccccccc-----cccccccceEEEECCCCCEEEEECCCCCeeccCchh
Confidence 459999999999999999999999999999998753211 112478999999999999999999999999999986
Q ss_pred CC
Q psy2339 105 PR 106 (125)
Q Consensus 105 ~~ 106 (125)
-.
T Consensus 85 ~~ 86 (92)
T 2l5f_A 85 LE 86 (92)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 5
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=99.85 E-value=4.5e-21 Score=120.38 Aligned_cols=70 Identities=21% Similarity=0.424 Sum_probs=62.2
Q ss_pred CCcEEEECCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCC
Q psy2339 29 EGWDMATTAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 103 (125)
Q Consensus 29 ~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr 103 (125)
.+|+++++++|++||+|+.|++++|++|....... ....++.+|+++.+.+|++||+|+.|++|+|++|+
T Consensus 5 ~~W~e~~~~~G~~YYyN~~T~~s~We~P~~~~~~~-----e~~~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P~ 74 (75)
T 2jxw_A 5 GRWVEGITSEGYHYYYDLISGASQWEKPEGFQGDL-----KKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPD 74 (75)
T ss_dssp CCEEEEEETTTEEEEEETTTTEEECSCCSSCSSCC-----SSSSCCCSEEEEEETTTEEEEEETTTTEEESSCCC
T ss_pred CCcEEEECCCCCEEEEECCCCCEeecCCCcccccc-----cccCCCccEEEEECCCCCEEEEECcCCCEeccCcC
Confidence 57999999999999999999999999998753321 23468999999999999999999999999999996
No 6
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.75 E-value=1.5e-18 Score=100.53 Aligned_cols=46 Identities=26% Similarity=0.535 Sum_probs=42.4
Q ss_pred CceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 49 RTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 49 ~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
++|+|++|+.. .+||.|||+++|.+|++|||||.|++|+|++|++.
T Consensus 1 ~tt~W~~P~~~-----------~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 1 GSSGSSGPLER-----------EGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp CCSSSCCSCCS-----------SCCCTTEEEEEETTTEEEEEETTTTEEESSCCCCC
T ss_pred CeecCcCCCCC-----------CCCCcCcEEEECCCCCEEEEECCCCCEeccCcCCC
Confidence 57999999863 56999999999999999999999999999999985
No 7
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=99.72 E-value=2.8e-19 Score=118.84 Aligned_cols=62 Identities=29% Similarity=0.635 Sum_probs=56.2
Q ss_pred CCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 27 LPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 27 LP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
.|.|||.+.+..|++||+|+++. ...+||.|||+.+|.+|++|||||.|++|+|+|||+++
T Consensus 46 ~p~~we~~~~~~~lV~~vn~~~d-------------------~~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 46 DARNFERYQHNRDLVNFINMFAD-------------------TRLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp CTHHHHHHTTCHHHHHHHHTTCC-------------------TTSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCCSC
T ss_pred CCcChhhhcCcCCceEEeccCCC-------------------CCCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCccc
Confidence 68999999999999999999962 12569999999999999999999999999999999975
Q ss_pred C
Q psy2339 107 S 107 (125)
Q Consensus 107 ~ 107 (125)
+
T Consensus 107 ~ 107 (109)
T 3l4h_A 107 Q 107 (109)
T ss_dssp C
T ss_pred c
Confidence 4
No 8
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.64 E-value=1.7e-16 Score=87.26 Aligned_cols=35 Identities=60% Similarity=1.310 Sum_probs=32.7
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
..+||.|||++.|.+|++|||||.|++|+|++||+
T Consensus 4 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 4 EGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp -CCCSSSCCEEEETTTEEEEEETTTTEEESSCTTC
T ss_pred cCCCCCCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 35799999999999999999999999999999996
No 9
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=99.63 E-value=4.3e-16 Score=87.36 Aligned_cols=38 Identities=47% Similarity=1.045 Sum_probs=34.9
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
...+||.|||++++.+|++|||||.|++|+|++||++.
T Consensus 4 ~~~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~~~ 41 (42)
T 2djy_A 4 GSGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSA 41 (42)
T ss_dssp CCSCCCSSEEEEECSSSCEEEEETTTTEEESSCTTTSC
T ss_pred CcCCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCCCC
Confidence 34679999999999999999999999999999999864
No 10
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.63 E-value=1.2e-15 Score=90.82 Aligned_cols=50 Identities=50% Similarity=0.952 Sum_probs=41.6
Q ss_pred CCCCCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCC
Q psy2339 20 SPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEG 76 (125)
Q Consensus 20 ~~~~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~g 76 (125)
..+...+||+|||++++.+|++||+||+|++|+|++|+..... ..+||.|
T Consensus 8 ~~~~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~~~~-------~~plp~g 57 (57)
T 2ysd_A 8 AEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNKQ-------QSGPSSG 57 (57)
T ss_dssp CCSCCCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTCSSC-------CCSCCCC
T ss_pred CCCCCCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCcccc-------CCCCCCC
Confidence 3455678999999999999999999999999999999986432 2467765
No 11
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.61 E-value=7e-16 Score=85.65 Aligned_cols=36 Identities=47% Similarity=0.959 Sum_probs=33.6
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
..+||.|||++++.+|++|||||.|++|+|++||+.
T Consensus 5 ~~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~~ 40 (40)
T 2ysf_A 5 SSGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTG 40 (40)
T ss_dssp CCCCCSSEEEEECTTCCEEEEETTTCCEESSCTTTC
T ss_pred cCCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCCC
Confidence 357999999999999999999999999999999974
No 12
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=99.61 E-value=1.2e-15 Score=87.20 Aligned_cols=38 Identities=45% Similarity=0.988 Sum_probs=35.1
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRS 107 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~ 107 (125)
..+||.|||++++.+|++|||||.|++|+|++||+..+
T Consensus 8 ~~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~~~~ 45 (46)
T 2ez5_W 8 EEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGRA 45 (46)
T ss_dssp SCCCCTTEEEEECTTSSEEEEETTTTEEESBCTTTCCB
T ss_pred CCCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCCCCC
Confidence 35799999999999999999999999999999999754
No 13
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.61 E-value=1.5e-15 Score=87.76 Aligned_cols=40 Identities=38% Similarity=0.715 Sum_probs=36.3
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRSHH 109 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~~~ 109 (125)
..+||.|||++++.+|++|||||+|++|+|++|+..++.+
T Consensus 9 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~~~ps~ 48 (49)
T 2ysb_A 9 DLPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLESGPSS 48 (49)
T ss_dssp CCCCCTTEEEEECSSSCEEEEETTTTEEESSCTTTSCCCC
T ss_pred CCCCCCCceEEECCCCCEEEEEcCCCCEEecCCCCCCCCC
Confidence 3579999999999999999999999999999999976643
No 14
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.61 E-value=6.5e-16 Score=83.85 Aligned_cols=34 Identities=41% Similarity=1.022 Sum_probs=32.5
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
.+||.||+++.|.+|++||+||.|++|+|++|++
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~l 36 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 36 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcCC
Confidence 5799999999999999999999999999999986
No 15
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.61 E-value=8.3e-16 Score=85.35 Aligned_cols=36 Identities=53% Similarity=0.954 Sum_probs=33.5
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
..+||.|||++.+.+|++|||||.|++|+|++|++.
T Consensus 5 ~~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~~s 40 (40)
T 2ysg_A 5 SSGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVMS 40 (40)
T ss_dssp SSCCCTTEEEEECSSSCEEEEESSSCCEECCCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCCCC
Confidence 357999999999999999999999999999999973
No 16
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=99.61 E-value=7.2e-16 Score=89.16 Aligned_cols=40 Identities=40% Similarity=0.920 Sum_probs=33.3
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRSH 108 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~~ 108 (125)
...+||.|||+++|.+|++|||||.|++|+|++|++..+.
T Consensus 9 ~~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~~~p~ 48 (49)
T 2kpz_A 9 EQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPA 48 (49)
T ss_dssp ---CCCTTEEEEECTTSCEEEEETTTTEEESSCTTCC---
T ss_pred cCCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCCCCCC
Confidence 3467999999999999999999999999999999997653
No 17
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=99.60 E-value=1.1e-15 Score=84.30 Aligned_cols=36 Identities=42% Similarity=1.019 Sum_probs=33.6
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
.++||.||+++.|.+|++|||||.|++|+|++|++.
T Consensus 4 ~~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~~e 39 (39)
T 2kyk_A 4 MGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLE 39 (39)
T ss_dssp SCCCCSSCEEEECTTSCEEEECSSSCCEECCCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCEeccCCCCC
Confidence 357999999999999999999999999999999973
No 18
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=99.60 E-value=8.9e-16 Score=85.65 Aligned_cols=36 Identities=44% Similarity=0.995 Sum_probs=33.5
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
..+||.|||+++|.+|++|||||.|++|+|++||++
T Consensus 6 ~~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~~ 41 (41)
T 1wr7_A 6 QSFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLK 41 (41)
T ss_dssp CCSSCTTEEEEECTTSCEEEEETTTTEEESSCGGGC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCeecCCCCCC
Confidence 357999999999999999999999999999999973
No 19
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=99.59 E-value=2.2e-15 Score=86.02 Aligned_cols=37 Identities=62% Similarity=1.272 Sum_probs=34.3
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
...+||.|||+++|.+|++|||||.|++|+|++||+.
T Consensus 8 ~~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~~ 44 (46)
T 2l4j_A 8 ASGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44 (46)
T ss_dssp TTSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSSC
T ss_pred cCCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCcC
Confidence 3467999999999999999999999999999999985
No 20
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=99.59 E-value=1.7e-15 Score=87.57 Aligned_cols=37 Identities=30% Similarity=0.584 Sum_probs=34.5
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
...+||.|||+++|.+|++|||||.|++|+|++|++.
T Consensus 10 ~~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 10 SELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp CSSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCSS
T ss_pred CCCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCCC
Confidence 4467999999999999999999999999999999986
No 21
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=99.59 E-value=2.7e-15 Score=87.10 Aligned_cols=39 Identities=46% Similarity=1.054 Sum_probs=35.6
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRS 107 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~ 107 (125)
...+||.|||++++.+|++|||||.|++|+|++||+...
T Consensus 8 ~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~~~ 46 (50)
T 1i5h_W 8 DLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQNV 46 (50)
T ss_dssp CCSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTSCC
T ss_pred cCCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCCcc
Confidence 446799999999999999999999999999999998654
No 22
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=99.58 E-value=2.2e-15 Score=88.44 Aligned_cols=38 Identities=47% Similarity=0.952 Sum_probs=35.1
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
...+||.|||+++|.+|++|||||+|++|+|++||+..
T Consensus 15 ~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~~~ 52 (53)
T 2jmf_A 15 NEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGA 52 (53)
T ss_dssp SCSCCCTTEEEEECTTSCEEEEETTTCCEESSCCCSSC
T ss_pred cCCCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCCCC
Confidence 34679999999999999999999999999999999864
No 23
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.58 E-value=4.4e-15 Score=88.35 Aligned_cols=39 Identities=62% Similarity=1.196 Sum_probs=35.9
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRS 107 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~ 107 (125)
...+||.|||++++.+|++|||||.|++|+|++||+...
T Consensus 11 ~~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtWe~Pr~~~~ 49 (57)
T 2ysd_A 11 NLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPRCLNK 49 (57)
T ss_dssp CCCSCCSSEEEEECSSCCEEEEETTTTEEESSCTTTCSS
T ss_pred CCCCCCcCcEEEECCCCCEEEEECCCCcEecCCCCCccc
Confidence 456899999999999999999999999999999999754
No 24
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=99.58 E-value=3.1e-15 Score=88.10 Aligned_cols=41 Identities=32% Similarity=0.818 Sum_probs=37.1
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRSHHG 110 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~~~~ 110 (125)
.++||.|||+++|.+|++|||||.|++|+|++||+.....+
T Consensus 9 ~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~~~~~~ 49 (54)
T 1wmv_A 9 AGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAFTVDD 49 (54)
T ss_dssp SSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSSCCCCC
T ss_pred CCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCcccccc
Confidence 45799999999999999999999999999999999876544
No 25
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=99.57 E-value=3.1e-15 Score=81.01 Aligned_cols=34 Identities=44% Similarity=0.981 Sum_probs=32.3
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
.+||.||+++.|.+|++|||||.|++|+|++|++
T Consensus 3 ~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~~ 36 (36)
T 1wr4_A 3 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIM 36 (36)
T ss_dssp TTCCTTEEEEECSSSCEEEEETTTTEEESSCCCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeCcCCCC
Confidence 4699999999999999999999999999999985
No 26
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=99.57 E-value=3.8e-15 Score=86.05 Aligned_cols=44 Identities=32% Similarity=0.554 Sum_probs=38.2
Q ss_pred CCCCCCCCCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 16 SGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 16 ~~~~~~~~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
+|....+...+||+|||++++.+|++||+||+|++|+|++|+..
T Consensus 3 ~~~~~~~~~~~LP~GWe~~~d~~Gr~YYvnh~t~~T~We~P~~~ 46 (49)
T 2zaj_A 3 SGSSGLDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPSGP 46 (49)
T ss_dssp CSCCCCCCSSCCCTTEEEEEETTTEEEEEETTTTEEESSCCCSS
T ss_pred CCccccCCCCCCCcCceEEEcCCCCEEEEeCCCCCEecCCCCCC
Confidence 44445556678999999999999999999999999999999874
No 27
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=99.57 E-value=5.7e-15 Score=84.31 Aligned_cols=36 Identities=44% Similarity=1.040 Sum_probs=33.7
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
.+||+|||++++.+|++||+||+|++|+|++|+...
T Consensus 9 ~~LP~gWe~~~~~~Gr~Yyinh~t~~TtW~~Pr~~~ 44 (46)
T 2ez5_W 9 EPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGR 44 (46)
T ss_dssp CCCCTTEEEEECTTSSEEEEETTTTEEESBCTTTCC
T ss_pred CCCCcCcEEEEcCCCCEEEEECCCCCEeccCCCCCC
Confidence 569999999999999999999999999999999864
No 28
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=99.56 E-value=5.5e-15 Score=82.82 Aligned_cols=37 Identities=49% Similarity=1.079 Sum_probs=34.0
Q ss_pred CCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 23 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 23 ~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
...+||+|||++++.+|++||+||+|++|+|++|+..
T Consensus 4 ~~~~LP~GWe~~~~~~G~~Yy~nh~t~~ttW~~Pr~~ 40 (42)
T 2djy_A 4 GSGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLS 40 (42)
T ss_dssp CCSCCCSSEEEEECSSSCEEEEETTTTEEESSCTTTS
T ss_pred CcCCCCcCcEEEECCCCCEEEEECCCCCEeCCCCCCC
Confidence 3467999999999999999999999999999999874
No 29
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=99.55 E-value=8.1e-15 Score=85.05 Aligned_cols=41 Identities=44% Similarity=1.025 Sum_probs=36.7
Q ss_pred CCCCCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCC
Q psy2339 20 SPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 20 ~~~~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
..+...+||+||+++++.+|++||+||+|++|+|++|+...
T Consensus 5 ~~~~~~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~We~Pr~~~ 45 (50)
T 1i5h_W 5 DSNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQN 45 (50)
T ss_dssp SSSCCSSCSTTEEEEECTTSCEEEEETTTTEEESSCTTTSC
T ss_pred CcccCCCCCcCcEEEEcCCCCEEEEECCCCCEEeeCCCCCc
Confidence 34556789999999999999999999999999999998864
No 30
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.55 E-value=6.8e-15 Score=81.61 Aligned_cols=34 Identities=56% Similarity=1.027 Sum_probs=32.4
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+||+||+++++.+|++||+||+|++|+|++|+.
T Consensus 6 ~~LP~gWe~~~~~~Gr~Yy~nh~t~~ttW~~P~~ 39 (40)
T 2ysg_A 6 SGLPYGWEEAYTADGIKYFINHVTQTTSWIHPVM 39 (40)
T ss_dssp SCCCTTEEEEECSSSCEEEEESSSCCEECCCCCC
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCcCcCCCCCC
Confidence 5699999999999999999999999999999986
No 31
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=99.55 E-value=3.1e-15 Score=82.13 Aligned_cols=34 Identities=62% Similarity=1.376 Sum_probs=32.2
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+||+||+++++.+|++||+||+|++|+|++|+.
T Consensus 5 ~~LP~gWe~~~~~~G~~Yy~nh~t~~ttW~~Prl 38 (38)
T 2law_A 5 GPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRL 38 (38)
T ss_dssp CCCSSSCCEEEETTTEEEEEETTTTEEESSCTTC
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 5799999999999999999999999999999984
No 32
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=99.55 E-value=5.2e-15 Score=80.61 Aligned_cols=35 Identities=49% Similarity=1.003 Sum_probs=32.8
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
.+||.||++..+.+|++||+||.|++|+|++|++.
T Consensus 2 ~~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~~ 36 (37)
T 1e0m_A 2 MGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRMS 36 (37)
T ss_dssp CCSCTTEEEEECSSCCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCeeeeCcCCC
Confidence 36999999999999999999999999999999974
No 33
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.55 E-value=1.3e-14 Score=83.86 Aligned_cols=37 Identities=43% Similarity=0.876 Sum_probs=34.4
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKP 61 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~ 61 (125)
.+||+|||++++.+|++||+||+|++|+|++|+...+
T Consensus 10 ~~LP~gWe~~~~~~Gr~Yy~nh~t~~T~W~~P~~~~p 46 (49)
T 2ysb_A 10 LPLPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLESGP 46 (49)
T ss_dssp CCCCTTEEEEECSSSCEEEEETTTTEEESSCTTTSCC
T ss_pred CCCCCCceEEECCCCCEEEEEcCCCCEEecCCCCCCC
Confidence 5799999999999999999999999999999998644
No 34
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=6.7e-15 Score=82.85 Aligned_cols=36 Identities=31% Similarity=0.809 Sum_probs=33.7
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
..+||.||++++|.+|++|||||.|++|+|++|+..
T Consensus 5 ~~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 5 SSGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp CCSCCTTEEEEECTTSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCCCceEEECCCCCEEEEECCCCCEecCCcCCC
Confidence 357999999999999999999999999999999975
No 35
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.54 E-value=1.4e-14 Score=80.39 Aligned_cols=34 Identities=50% Similarity=1.052 Sum_probs=32.3
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+||+|||++++.+|++||+||+|++|+|++|+.
T Consensus 6 ~~LP~gWe~~~~~~G~~Yy~nh~t~~ttw~~Pr~ 39 (40)
T 2ysf_A 6 SGLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39 (40)
T ss_dssp CCCCSSEEEEECTTCCEEEEETTTCCEESSCTTT
T ss_pred CCCCcCcEEEEcCCCCEEEEECCCCcEecCCCCC
Confidence 5699999999999999999999999999999986
No 36
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=99.53 E-value=1.3e-14 Score=80.03 Aligned_cols=35 Identities=43% Similarity=1.052 Sum_probs=32.9
Q ss_pred CCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 24 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 24 ~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.++||+||+++++.+|++||+||+|++|+|++|+.
T Consensus 4 ~~~LP~gWe~~~d~~G~~YY~n~~t~~t~We~P~~ 38 (39)
T 2kyk_A 4 MGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTL 38 (39)
T ss_dssp SCCCCSSCEEEECTTSCEEEECSSSCCEECCCCCC
T ss_pred cCCCCCCcEEEEcCCCCEEEEECCCCCEeccCCCC
Confidence 46799999999999999999999999999999975
No 37
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=99.53 E-value=9.5e-15 Score=84.41 Aligned_cols=38 Identities=42% Similarity=0.975 Sum_probs=32.9
Q ss_pred CCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCC
Q psy2339 23 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 23 ~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
...+||+||+++++.+|++||+||+|++|+|++|+...
T Consensus 9 ~~~~LP~gWe~~~~~~G~~Yy~nh~T~~ttWe~Pr~~~ 46 (49)
T 2kpz_A 9 EQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKI 46 (49)
T ss_dssp ---CCCTTEEEEECTTSCEEEEETTTTEEESSCTTCC-
T ss_pred cCCCCCCCcEEEECCCCCEEEEECCCCCEecCCCCCCC
Confidence 44679999999999999999999999999999999864
No 38
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=99.53 E-value=1.1e-14 Score=78.90 Aligned_cols=34 Identities=41% Similarity=1.022 Sum_probs=32.0
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+||+||+++.+.+|++||+||+|++|+|++|++
T Consensus 3 ~~LP~GWe~~~d~~G~~Yy~n~~t~~t~We~P~l 36 (36)
T 1wr3_A 3 PPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRPSL 36 (36)
T ss_dssp SCSCTTEEEEECSSSCEEEEETTTCCEESSCSCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeeeCcCC
Confidence 5699999999999999999999999999999974
No 39
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=99.52 E-value=2.3e-14 Score=81.77 Aligned_cols=36 Identities=64% Similarity=1.297 Sum_probs=33.6
Q ss_pred CCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 24 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 24 ~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
..+||+|||++++.+|++||+||+|++|+|++|+..
T Consensus 9 ~~~LP~gWe~~~~~~G~~Yyinh~t~~TtWe~Pr~~ 44 (46)
T 2l4j_A 9 SGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44 (46)
T ss_dssp TSCCCTTCEEEECTTSCEEEEETTTTEEECSCCSSC
T ss_pred CCCCCcCceeEECCCCCEEEEECCCCCEeCCCCCcC
Confidence 367999999999999999999999999999999874
No 40
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=99.51 E-value=1.3e-14 Score=80.84 Aligned_cols=34 Identities=47% Similarity=1.075 Sum_probs=32.2
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+||+||+++++.+|++||+||+|++|+|++|+.
T Consensus 7 ~~LP~gWe~~~~~~G~~Yy~n~~t~~t~We~Pr~ 40 (41)
T 1wr7_A 7 SFLPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRL 40 (41)
T ss_dssp CSSCTTEEEEECTTSCEEEEETTTTEEESSCGGG
T ss_pred CCCCCCcEEEEcCCCCEEEEECCCCCeecCCCCC
Confidence 5699999999999999999999999999999975
No 41
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.4e-14 Score=86.85 Aligned_cols=44 Identities=30% Similarity=0.534 Sum_probs=38.5
Q ss_pred CCCCCCCCCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 16 SGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 16 ~~~~~~~~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
+|....+...+||+|||++++.+|++||+||+|++|+|++|+..
T Consensus 3 ~g~~~~d~~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~ 46 (60)
T 2yse_A 3 SGSSGLDSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLE 46 (60)
T ss_dssp CCSCCCCCCSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHHH
T ss_pred CCccccCCCCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCch
Confidence 45555666678999999999999999999999999999999764
No 42
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=99.50 E-value=2.8e-14 Score=83.71 Aligned_cols=37 Identities=49% Similarity=0.971 Sum_probs=34.2
Q ss_pred CCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCC
Q psy2339 24 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 24 ~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
..+||+|||++++.+|++||+||+|++|+|++|+...
T Consensus 16 ~~~LP~GWe~~~~~~Gr~Yyinh~tk~TtW~dPr~~~ 52 (53)
T 2jmf_A 16 EGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGA 52 (53)
T ss_dssp CSCCCTTEEEEECTTSCEEEEETTTCCEESSCCCSSC
T ss_pred CCCCCcCcEEEEcCCCCEEEEeCCCCcEecCCCCCCC
Confidence 3679999999999999999999999999999998853
No 43
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=99.50 E-value=2.4e-14 Score=80.49 Aligned_cols=35 Identities=46% Similarity=0.871 Sum_probs=32.6
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
.+||.||+++.|.+|++||+||.|++|+|++|+..
T Consensus 7 ~~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 7 MPLPPGWERRTDVEGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp CCCCSSEEEEECTTSCEEEEETTTTEEESSCCCSC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCCcccCCccc
Confidence 35999999999999999999999999999999864
No 44
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=1.2e-14 Score=87.26 Aligned_cols=37 Identities=27% Similarity=0.561 Sum_probs=34.4
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
...+||.|||+++|.+|++|||||.|++|+|++|++.
T Consensus 10 ~~~~LP~GWE~~~d~~Gr~YYvnh~tk~T~We~P~~~ 46 (60)
T 2yse_A 10 SELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLE 46 (60)
T ss_dssp CCSSCCSSEEEEECSSSCEEEEETTTTEEESSCHHHH
T ss_pred CCCCCCCCcEEEECCCCCEEEEeCCCCCeeccCCCch
Confidence 4467999999999999999999999999999999985
No 45
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=99.49 E-value=3.7e-14 Score=76.69 Aligned_cols=34 Identities=44% Similarity=0.981 Sum_probs=31.8
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+||+||+++.+.+|++||+||+|++|+|++|+.
T Consensus 3 ~~LP~gWe~~~d~~g~~Yy~n~~t~~t~W~~P~~ 36 (36)
T 1wr4_A 3 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIM 36 (36)
T ss_dssp TTCCTTEEEEECSSSCEEEEETTTTEEESSCCCC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEeCcCCCC
Confidence 4699999999999999999999999999999963
No 46
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.48 E-value=5.7e-14 Score=77.75 Aligned_cols=34 Identities=35% Similarity=0.797 Sum_probs=32.4
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
..||.||++++|.+|++||+||.|++|+|++|+.
T Consensus 6 ~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 6 SGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp SSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 5799999999999999999999999999999985
No 47
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=99.48 E-value=4.5e-14 Score=77.39 Aligned_cols=34 Identities=35% Similarity=0.671 Sum_probs=31.2
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
.+||.|||++.|.+| +||+||.|++|+|++|+..
T Consensus 2 ~~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 2 SDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CCSCTTEEEEECSSC-EEEEETTTTEEESSCCCC-
T ss_pred CcCCCCceEEEeCCC-CEEEecCCCCEeccCCCCC
Confidence 369999999999999 9999999999999999975
No 48
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=7.3e-14 Score=78.55 Aligned_cols=35 Identities=31% Similarity=0.852 Sum_probs=32.8
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
.+||+||+++++.+|++||+||+|++|+|++|+..
T Consensus 6 ~~LP~GWe~~~d~~Gr~YY~n~~t~~T~We~P~~~ 40 (43)
T 2dmv_A 6 SGLPPGWEQRVDQHGRVYYVDHVEKRTTWDRPSGP 40 (43)
T ss_dssp CSCCTTEEEEECTTSCEEEEETTTCCEESSCSSSC
T ss_pred CCCCCCceEEECCCCCEEEEECCCCCEecCCcCCC
Confidence 56999999999999999999999999999999864
No 49
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=99.46 E-value=6.8e-14 Score=76.13 Aligned_cols=35 Identities=49% Similarity=1.003 Sum_probs=32.5
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
.+||+||+++.+.+|++||+|+.|++|+|++|+..
T Consensus 2 ~~LP~gW~~~~~~~G~~Yy~n~~t~~t~W~~P~~~ 36 (37)
T 1e0m_A 2 MGLPPGWDEYKTHNGKTYYYNHNTKTSTWTDPRMS 36 (37)
T ss_dssp CCSCTTEEEEECSSCCEEEEETTTTEEESSCTTTC
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCeeeeCcCCC
Confidence 36999999999999999999999999999999863
No 50
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=99.46 E-value=1.9e-13 Score=80.45 Aligned_cols=39 Identities=33% Similarity=0.851 Sum_probs=35.7
Q ss_pred CCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCCC
Q psy2339 24 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKPS 62 (125)
Q Consensus 24 ~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~~ 62 (125)
.++||+|||++++.+|++||+||+|++|+|++|+.....
T Consensus 9 ~~~LP~GWe~~~~~~G~~Yyinh~tk~TtwedPr~~~~~ 47 (54)
T 1wmv_A 9 AGDLPYGWEQETDENGQVFFVDHINKRTTYLDPRLAFTV 47 (54)
T ss_dssp SSCSCTTEEEEECTTSCEEEEESSSCCEESSCTTSSCCC
T ss_pred CCCCCcCcEEEECCCCCEEEEeCCCCCEeecCCCCcccc
Confidence 467999999999999999999999999999999987554
No 51
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=99.43 E-value=2.3e-13 Score=75.25 Aligned_cols=34 Identities=35% Similarity=0.797 Sum_probs=31.9
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+||+||+++++.+|++||+|+.|++|+|++|+.
T Consensus 6 ~~LP~gW~~~~d~~Gr~YY~n~~T~~t~We~P~~ 39 (40)
T 2ysh_A 6 SGLPPGWQSYLSPQGRRYYVNTTTNETTWERPSS 39 (40)
T ss_dssp SSCCTTCEEEECTTSCEEEECSSSCCEESSSCCC
T ss_pred CCCCCCceEEECCCCCEEEEECCCCCEeCCCCCC
Confidence 4599999999999999999999999999999975
No 52
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=99.43 E-value=1.7e-13 Score=76.99 Aligned_cols=37 Identities=43% Similarity=0.803 Sum_probs=33.1
Q ss_pred CCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 23 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 23 ~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
...+||+||+++++.+|++||+|+.|++|+|++|+..
T Consensus 5 ~~~~LP~gW~~~~~~~Gr~YY~n~~T~~t~We~P~~~ 41 (43)
T 1ymz_A 5 RSMPLPPGWERRTDVEGKVYYFNVRTLTTTWERPTII 41 (43)
T ss_dssp --CCCCSSEEEEECTTSCEEEEETTTTEEESSCCCSC
T ss_pred cCCCCCCCCEEEECCCCCEEEEECCCCCCcccCCccc
Confidence 4467999999999999999999999999999999864
No 53
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.43 E-value=1.6e-13 Score=79.20 Aligned_cols=35 Identities=31% Similarity=0.719 Sum_probs=33.0
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
.+||+|||++.+.+|++||+||+|++|+|++|+..
T Consensus 12 ~~LP~GWe~~~d~~g~~YYvnh~t~~T~We~P~~~ 46 (49)
T 2dwv_A 12 EGLPPGWERVESSEFGTYYVDHTNKRAQYRHPSGP 46 (49)
T ss_dssp SCCCTTEEEEEETTTEEEEEETTTTEEESSCCCCC
T ss_pred CCCCcCcEEEECCCCCEEEEECCCCCEeccCcCCC
Confidence 56999999999999999999999999999999874
No 54
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=99.41 E-value=1.4e-13 Score=78.38 Aligned_cols=36 Identities=53% Similarity=1.046 Sum_probs=33.9
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
.+||.||+++.+.+|+.||+||.+++|+|+|||...
T Consensus 7 ~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~~~ 42 (46)
T 1jmq_A 7 VPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAM 42 (46)
T ss_dssp CCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTTSS
T ss_pred CCCCcCcEEEEcCCCceEEEEecCCceeecCCCchh
Confidence 579999999999999999999999999999999864
No 55
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=99.38 E-value=4.4e-13 Score=73.82 Aligned_cols=33 Identities=36% Similarity=0.781 Sum_probs=30.5
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 103 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr 103 (125)
..+||.|||++.|.+| .||+||.|++|+|++|+
T Consensus 6 ~~~LP~GWe~~~~~~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 6 SGGLPPGWRKIHDAAG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCCTTEEEEEETTE-EEEEESSSCCEESSCCC
T ss_pred CCCCCCCcEEEEcCCC-CEEEEcCCCCEeccCCC
Confidence 3579999999999998 59999999999999996
No 56
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=99.36 E-value=8.8e-13 Score=72.20 Aligned_cols=33 Identities=36% Similarity=0.687 Sum_probs=30.5
Q ss_pred CCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 26 PLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 26 pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
+||+||+++.+..| +||+|+.|++|+|++|+..
T Consensus 3 ~LP~GWe~~~d~~g-~YY~n~~t~~tqWe~P~~~ 35 (38)
T 2ho2_A 3 DLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 35 (38)
T ss_dssp CSCTTEEEEECSSC-EEEEETTTTEEESSCCCC-
T ss_pred cCCCCceEEEeCCC-CEEEecCCCCEeccCCCCC
Confidence 59999999999999 9999999999999999764
No 57
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=99.33 E-value=2.1e-12 Score=75.89 Aligned_cols=35 Identities=29% Similarity=0.683 Sum_probs=32.2
Q ss_pred CCCCCCCeEEEcC-CCceEEeeCCCCeeeCCCCCCC
Q psy2339 71 GPLPEGWDMATTA-EGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 71 ~~LP~gWe~~~d~-~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
..||.||+++.+. .|++||+|+.|++|+|++|...
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 4699999999986 8999999999999999999864
No 58
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=99.32 E-value=1.5e-12 Score=71.67 Aligned_cols=32 Identities=38% Similarity=0.827 Sum_probs=29.8
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 57 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~ 57 (125)
.+||+||+++.+.+| .||+|+.|++|+|++|+
T Consensus 7 ~~LP~GWe~~~~~~G-~YY~n~~t~~tqWe~P~ 38 (39)
T 2ysc_A 7 GGLPPGWRKIHDAAG-TYYWHVPSGSTQWQRPT 38 (39)
T ss_dssp CCCCTTEEEEEETTE-EEEEESSSCCEESSCCC
T ss_pred CCCCCCcEEEEcCCC-CEEEEcCCCCEeccCCC
Confidence 579999999999999 59999999999999995
No 59
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=99.32 E-value=2.3e-12 Score=75.74 Aligned_cols=35 Identities=29% Similarity=0.683 Sum_probs=31.8
Q ss_pred CCCCCCcEEEECC-CCCeEEeeCCCCceeccCCCCC
Q psy2339 25 GPLPEGWDMATTA-EGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 25 ~pLP~gWe~~~~~-~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
.+||+||+++.+. .|++||+|+.|++|+|++|...
T Consensus 6 ~~LP~GW~~~~~~~~Gr~YY~N~~T~~sqWe~P~~~ 41 (54)
T 2jv4_A 6 TGLPAGWEVRHSNSKNLPYYFNPATRESRWEPPADT 41 (54)
T ss_dssp CCCCSSCCEEECSSSSCEEEEETTTTEEESSCCTTS
T ss_pred CCCCCCcEEEEECCCCCEEEEECCCCcEEecCCCCc
Confidence 3499999999987 7999999999999999999764
No 60
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=99.30 E-value=3.3e-12 Score=84.77 Aligned_cols=37 Identities=41% Similarity=0.987 Sum_probs=34.6
Q ss_pred CCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCC
Q psy2339 24 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 24 ~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
.++||+|||++++.+|++||+||+|++|+|++|+...
T Consensus 70 ~~pLP~GWE~r~d~~Gr~YfIdH~tktTtW~dPRl~~ 106 (109)
T 3l4h_A 70 RLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPL 106 (109)
T ss_dssp TSCCCTTEEEEECTTCCEEEEETTTTEEESSCSCCSC
T ss_pred CCCCCCCCeEEECCCCCEEEEeCCCCCEeeCCCCccc
Confidence 4679999999999999999999999999999999864
No 61
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=99.29 E-value=3.9e-12 Score=81.70 Aligned_cols=38 Identities=47% Similarity=1.078 Sum_probs=35.0
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
...+||.|||++++.+|++|||||.|++|+|++|+...
T Consensus 9 ~~~~LP~gWe~~~~~~Gr~Yy~n~~t~~t~W~~P~~~~ 46 (88)
T 1tk7_A 9 ALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQG 46 (88)
T ss_dssp TTSSSSSSCCEEEETTTEEEEEETTTTEEEEESCCCTT
T ss_pred ccCCCCCCcEEEECCCCCEEEEECCCCCeEeecccccc
Confidence 44679999999999999999999999999999999864
No 62
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=99.29 E-value=1.5e-12 Score=74.05 Aligned_cols=36 Identities=53% Similarity=1.049 Sum_probs=33.7
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
.+||+||+++.+.+||.||+||+|++|+|++|+...
T Consensus 7 ~~LP~GWe~~~~~~gr~y~~n~~t~~t~W~dPr~~~ 42 (46)
T 1jmq_A 7 VPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAM 42 (46)
T ss_dssp CCCCTTBCCBCCSSCCCBEEETTTTEEESSCTTTSS
T ss_pred CCCCcCcEEEEcCCCceEEEEecCCceeecCCCchh
Confidence 569999999999999999999999999999999864
No 63
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=99.28 E-value=6.3e-12 Score=81.02 Aligned_cols=37 Identities=43% Similarity=0.986 Sum_probs=34.3
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRS 107 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~ 107 (125)
.+||.||+++++.+|++|||||.|++|+|++|+....
T Consensus 8 ~~LP~gWe~~~~~~Gr~YY~n~~t~~t~W~~P~~~~~ 44 (90)
T 2kxq_A 8 PDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRD 44 (90)
T ss_dssp CSCCSSCEEEEETTTEEEEEETTTTEEESSCSSSCSS
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCeEeeeccccccc
Confidence 5799999999999999999999999999999997643
No 64
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=99.24 E-value=1e-11 Score=72.46 Aligned_cols=36 Identities=33% Similarity=0.611 Sum_probs=32.5
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
....||+||+++.|..| +||+||.|++|||+.|...
T Consensus 16 ~~~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~~~ 51 (55)
T 2e45_A 16 TDSDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 51 (55)
T ss_dssp SCSCCCTTEEEEEETTE-EEEEETTTCCEESSCCCCC
T ss_pred CCCCCCCCCeEeecCCC-CEEEEcCCCCCccCCCCCC
Confidence 34579999999999999 9999999999999999754
No 65
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=99.19 E-value=1.2e-11 Score=72.04 Aligned_cols=35 Identities=23% Similarity=0.520 Sum_probs=32.0
Q ss_pred CCCCCCCeEEEc-CCCceEEeeCCCCeeeCCCCCCC
Q psy2339 71 GPLPEGWDMATT-AEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 71 ~~LP~gWe~~~d-~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
..||.||+++++ ..|+.||||+.|++|+|+.|+..
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 358999999998 48999999999999999999976
No 66
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=99.16 E-value=5.1e-11 Score=69.49 Aligned_cols=36 Identities=33% Similarity=0.611 Sum_probs=32.3
Q ss_pred CCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 23 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 23 ~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
...+||+||+++.|..| +||+|+.|++|+|++|...
T Consensus 16 ~~~~LPpGW~~~~D~sG-tYY~h~~T~tTQWerP~~~ 51 (55)
T 2e45_A 16 TDSDLPAGWMRVQDTSG-TYYWHIPTGTTQWEPPGRA 51 (55)
T ss_dssp SCSCCCTTEEEEEETTE-EEEEETTTCCEESSCCCCC
T ss_pred CCCCCCCCCeEeecCCC-CEEEEcCCCCCccCCCCCC
Confidence 33669999999999999 9999999999999999653
No 67
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=99.06 E-value=7.9e-11 Score=94.56 Aligned_cols=45 Identities=49% Similarity=1.011 Sum_probs=39.8
Q ss_pred CCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCCCCCCCCC
Q psy2339 69 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPRSHHGINP 113 (125)
Q Consensus 69 ~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~~~~~~~~ 113 (125)
..++||+|||++++++|++||+||+|++|+|+|||++....+..|
T Consensus 5 ~~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~~~~~~~~~~ 49 (429)
T 3olm_A 5 QLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSLDQNVP 49 (429)
T ss_dssp CCCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTSCCCCCSSCC
T ss_pred cCCCCCCCceeEECCCCCeEEEeCCCcceeccCCCCCcccccCcc
Confidence 457899999999999999999999999999999999866555555
No 68
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.06 E-value=2.7e-10 Score=62.90 Aligned_cols=33 Identities=30% Similarity=0.637 Sum_probs=31.1
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 103 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr 103 (125)
.+++.+|++..+.+|+.||+|..|++++|+.|.
T Consensus 6 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 38 (40)
T 2ysi_A 6 SGTEEIWVENKTPDGKVYYYNARTRESAWTKPD 38 (40)
T ss_dssp CCCCCSEEEEECTTSCEEEEETTTCCEESSCCS
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 468899999999999999999999999999996
No 69
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.05 E-value=5.5e-11 Score=89.95 Aligned_cols=36 Identities=31% Similarity=0.689 Sum_probs=33.8
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
.+||+|||++.+++|++||+||+|++|+|++|++..
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~~~~ 45 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPKMTE 45 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHHHHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCchhh
Confidence 579999999999999999999999999999999754
No 70
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=99.04 E-value=2.6e-11 Score=70.65 Aligned_cols=35 Identities=23% Similarity=0.520 Sum_probs=31.8
Q ss_pred CCCCCCcEEEECC-CCCeEEeeCCCCceeccCCCCC
Q psy2339 25 GPLPEGWDMATTA-EGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 25 ~pLP~gWe~~~~~-~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
..||.||+++++. .|+.||+|+.|++++|++|...
T Consensus 9 ~~LP~gW~~~~~~~~gr~YY~N~~T~~SqWe~P~~~ 44 (52)
T 2jx8_A 9 ELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMPVLG 44 (52)
T ss_dssp HHHHHTCCEEEETTTTEEEEEETTTTEEESSCCCCT
T ss_pred CCCCcCcEEEEccccCCEEEEECCCCCEEeCCCCCC
Confidence 3489999999985 7999999999999999999875
No 71
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=99.02 E-value=9.2e-11 Score=72.89 Aligned_cols=56 Identities=30% Similarity=0.456 Sum_probs=44.5
Q ss_pred CCCCCCceeeCCCCCCCCCCCC---------CCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 4 DSCGKNRVVPKPSGSVSPGSLG---------PLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 4 ~~~g~~~~~~~~~~~~~~~~~~---------pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
+..|.-+++-...+...-+.+. .||.||+++.+.+|++||+|+.|++|+|++|+..
T Consensus 9 ~~~Gr~YY~n~~T~~s~W~~P~~~~~~~~~~~lp~gW~~~~~~~Gr~Yy~n~~t~~t~W~~P~~~ 73 (75)
T 1o6w_A 9 DASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTRETSWTIPAFE 73 (75)
T ss_dssp CTTCCEEEEETTTTEEESSCCHHHHHHHHHHHHHHTCEEEECTTCCEEEEETTTTEEESSCCCCC
T ss_pred CCCCCeEEEECCCCCEEeecchhhcccccccCCCCeEEEEECCCCCEEEEECCCCCEECCCCCCC
Confidence 4567777777666665544332 4788999999999999999999999999999874
No 72
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=99.01 E-value=7.1e-10 Score=61.18 Aligned_cols=34 Identities=29% Similarity=0.574 Sum_probs=31.4
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
.+++.+|+++.+.+|+.||+|..|++++|++|..
T Consensus 6 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~~ 39 (40)
T 2ysi_A 6 SGTEEIWVENKTPDGKVYYYNARTRESAWTKPDG 39 (40)
T ss_dssp CCCCCSEEEEECTTSCEEEEETTTCCEESSCCSC
T ss_pred CCCCCCCEEEECCCCCEEEEECCCCCEEeCCCCC
Confidence 5688999999999999999999999999999964
No 73
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.98 E-value=3e-10 Score=63.00 Aligned_cols=33 Identities=27% Similarity=0.700 Sum_probs=27.5
Q ss_pred CCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCC
Q psy2339 71 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 103 (125)
Q Consensus 71 ~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr 103 (125)
+.+|.+|++..+.+|+.||+|..|++++|+.|.
T Consensus 8 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 8 GSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp ----CCEEEEEETTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 457899999999999999999999999999995
No 74
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.98 E-value=3.3e-10 Score=80.44 Aligned_cols=36 Identities=33% Similarity=0.775 Sum_probs=29.1
Q ss_pred CCCCCCcEEEEC-CCCCeEEeeCCCCceeccCCCCCC
Q psy2339 25 GPLPEGWDMATT-AEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 25 ~pLP~gWe~~~~-~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
.+||+||+.+++ ..|++||+||.|++|+|++|+...
T Consensus 8 ~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~~ 44 (166)
T 3tc5_A 8 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNS 44 (166)
T ss_dssp --CCTTEEEEECTTTCCEEEEETTTCCEESSCC----
T ss_pred CCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCCc
Confidence 679999999999 489999999999999999998753
No 75
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=98.97 E-value=3.8e-10 Score=80.09 Aligned_cols=37 Identities=32% Similarity=0.726 Sum_probs=29.3
Q ss_pred CCCCCCCCeEEEc-CCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 70 LGPLPEGWDMATT-AEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 70 ~~~LP~gWe~~~d-~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
..+||+||+++.| ..|++||+||.|++|+|++|+...
T Consensus 7 ~~~LP~gWe~~~~~~~g~~yy~n~~t~~t~We~P~~~~ 44 (166)
T 3tc5_A 7 EEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNS 44 (166)
T ss_dssp ---CCTTEEEEECTTTCCEEEEETTTCCEESSCC----
T ss_pred CCCCCCCceEEEcCCCCCEEEEECCCCCEEecCCCCCc
Confidence 3579999999999 699999999999999999998653
No 76
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.97 E-value=2.2e-10 Score=86.61 Aligned_cols=34 Identities=32% Similarity=0.725 Sum_probs=32.6
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
++||+|||++.+.+|++||+||+|++|+|++|+.
T Consensus 10 ~~l~~~we~~~~~~~~~y~~~h~~~tt~w~~p~~ 43 (261)
T 1eg3_A 10 TSVQGPWERAISPNKVPYYINHETQTTCWDHPKM 43 (261)
T ss_dssp TTCCTTEEEEECTTSCEEEEETTTTEEESSCHHH
T ss_pred CCCCCCcceeECCCCCeEeecCCcccccCCCCch
Confidence 6799999999999999999999999999999985
No 77
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=98.96 E-value=5.1e-10 Score=72.27 Aligned_cols=36 Identities=22% Similarity=0.499 Sum_probs=33.1
Q ss_pred CCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 70 LGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 70 ~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
...||.||+++.+++|++||+|+.|++|+|++|+..
T Consensus 9 ~~~lp~~W~e~~~~~Gr~YYyN~~T~~s~We~P~~~ 44 (92)
T 2l5f_A 9 ASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDL 44 (92)
T ss_dssp TTBTTTTEEEEECTTSCEEEEETTTTEEESSCSGGG
T ss_pred CCCCCCCcEEEEcCCCCEEEEECCCCceecccCccc
Confidence 356999999999999999999999999999999854
No 78
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.95 E-value=1.3e-09 Score=59.12 Aligned_cols=32 Identities=31% Similarity=0.644 Sum_probs=29.4
Q ss_pred CCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 73 LPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 73 LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
+..+|++..+.+|+.||+|..|++++|+.|.-
T Consensus 4 ~~~~W~e~~~~~G~~YYyN~~T~es~We~P~~ 35 (37)
T 1e0l_A 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQE 35 (37)
T ss_dssp SSCSCEEEECTTSCEEEEETTTTEEESSCCSS
T ss_pred CCCCeEEEECCCCCEEEEECCCCCEEecCCCc
Confidence 45789999999999999999999999999963
No 79
>3olm_A E3 ubiquitin-protein ligase RSP5; ligase; 2.50A {Saccharomyces cerevisiae}
Probab=98.94 E-value=4.1e-10 Score=90.43 Aligned_cols=40 Identities=50% Similarity=1.127 Sum_probs=36.0
Q ss_pred CCCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCCCC
Q psy2339 22 GSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIPKP 61 (125)
Q Consensus 22 ~~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~ 61 (125)
+..++||+|||++++++|++||+||+|++|+|++|+....
T Consensus 4 ~~~~~lP~gWe~~~~~~g~~y~i~h~~~~t~w~~Pr~~~~ 43 (429)
T 3olm_A 4 SQLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSS 43 (429)
T ss_dssp -CCCCCCTTCCCCCSSCCCCCEEETTTTEEESSCTTSCCC
T ss_pred ccCCCCCCCceeEECCCCCeEEEeCCCcceeccCCCCCcc
Confidence 3458899999999999999999999999999999998653
No 80
>1e0l_A Formin binding protein; SH3 domain, WW domain, FBP28, signal transduction; NMR {Mus musculus} SCOP: b.72.1.1 PDB: 2jup_W 2rly_W 2rm0_W 2nnt_A
Probab=98.91 E-value=2.2e-09 Score=58.21 Aligned_cols=33 Identities=30% Similarity=0.602 Sum_probs=30.0
Q ss_pred CCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 27 LPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 27 LP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
...+|+++.+++|+.||+|..|++++|++|...
T Consensus 4 ~~~~W~e~~~~~G~~YYyN~~T~es~We~P~~~ 36 (37)
T 1e0l_A 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQEL 36 (37)
T ss_dssp SSCSCEEEECTTSCEEEEETTTTEEESSCCSSC
T ss_pred CCCCeEEEECCCCCEEEEECCCCCEEecCCCcc
Confidence 457899999999999999999999999999753
No 81
>1ywi_A Formin-binding protein 3; WW domain, class II, proline-rich peptides, protein-protein interactions, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1ywj_A 1zr7_A 2dyf_A
Probab=98.91 E-value=8.5e-10 Score=61.15 Aligned_cols=33 Identities=27% Similarity=0.700 Sum_probs=27.4
Q ss_pred CCCCCCcEEEECCCCCeEEeeCCCCceeccCCC
Q psy2339 25 GPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 57 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~ 57 (125)
+.++.+|+++.+++|+.||+|..|++++|++|.
T Consensus 8 ~~~~~~W~e~~~~~G~~YYyN~~T~eS~We~P~ 40 (41)
T 1ywi_A 8 GSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPD 40 (41)
T ss_dssp ----CCEEEEEETTTEEEEEETTTTEEEESCC-
T ss_pred CCCCCCcEEEECCCCCEEEEECCCCCEEeCCCC
Confidence 457899999999999999999999999999985
No 82
>2jxw_A WW domain-binding protein 4; WW domain containing protein, FBP21, WBP4, metal- binding, mRNA processing, mRNA splicing, nucleus, polymorphism; NMR {Homo sapiens}
Probab=98.82 E-value=5.9e-09 Score=64.77 Aligned_cols=35 Identities=23% Similarity=0.471 Sum_probs=31.9
Q ss_pred CCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCC
Q psy2339 23 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 57 (125)
Q Consensus 23 ~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~ 57 (125)
+..+++.+|+++.+.+||+||+|+.|++++|++|.
T Consensus 40 e~~~~~~~W~~~~~~~Gr~YyyN~~T~~s~We~P~ 74 (75)
T 2jxw_A 40 KKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPD 74 (75)
T ss_dssp SSSSCCCSEEEEEETTTEEEEEETTTTEEESSCCC
T ss_pred cccCCCccEEEEECCCCCEEEEECcCCCEeccCcC
Confidence 34568999999999999999999999999999996
No 83
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.78 E-value=6e-09 Score=52.69 Aligned_cols=27 Identities=22% Similarity=0.630 Sum_probs=24.5
Q ss_pred CCCeEEEcCCCceEEeeCCCCeeeCCCC
Q psy2339 75 EGWDMATTAEGETYFINHTTRTTSWFDP 102 (125)
Q Consensus 75 ~gWe~~~d~~G~~yY~nh~t~~T~w~~P 102 (125)
.||+ .....|+.||+|..|++|+|+.|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 4899 66689999999999999999987
No 84
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=98.67 E-value=1.7e-08 Score=51.02 Aligned_cols=27 Identities=22% Similarity=0.630 Sum_probs=23.8
Q ss_pred CCcEEEECCCCCeEEeeCCCCceeccCC
Q psy2339 29 EGWDMATTAEGETYFINHTTRTTSWFDP 56 (125)
Q Consensus 29 ~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P 56 (125)
+||+ ....+|+.||+|..|++++|+.|
T Consensus 1 ~gWe-~~~~~g~~YYyN~~T~~s~We~P 27 (27)
T 1e0n_A 1 PGWE-IIHENGRPLYYNAEQKTKLHYPP 27 (27)
T ss_dssp CCEE-EEESSSSEEEEETTTTEEESSCC
T ss_pred CCCe-EECCCCCeEEEECCCCCEeccCC
Confidence 4899 55568999999999999999987
No 85
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=4.8e-07 Score=55.65 Aligned_cols=32 Identities=28% Similarity=0.455 Sum_probs=28.8
Q ss_pred CCCeEEEcCCCceEEeeCCCCeeeCCCCCCCC
Q psy2339 75 EGWDMATTAEGETYFINHTTRTTSWFDPRIPR 106 (125)
Q Consensus 75 ~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~~ 106 (125)
..|.++.+.+||+||||..|+++.|+.|.--.
T Consensus 20 t~W~~v~T~dGR~fyyN~~Tk~S~WekP~eLk 51 (73)
T 2dk7_A 20 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDLI 51 (73)
T ss_dssp SSCEEEEESSSCEEEEETTTTEECSSCCTTTT
T ss_pred CCcEEEECCCCCEEEecCcccceeccCChHhc
Confidence 35999999999999999999999999997543
No 86
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.30 E-value=5.4e-07 Score=55.39 Aligned_cols=32 Identities=28% Similarity=0.443 Sum_probs=29.9
Q ss_pred CcEEEECCCCCeEEeeCCCCceeccCCCCCCC
Q psy2339 30 GWDMATTAEGETYFINHTTRTTSWFDPRIPKP 61 (125)
Q Consensus 30 gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~~ 61 (125)
.|.+..+.+||+||+|..|+++.|+.|...+.
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~WekP~eLk~ 52 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSMWDRPDDLIG 52 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEECSSCCTTTTT
T ss_pred CcEEEECCCCCEEEecCcccceeccCChHhcC
Confidence 59999999999999999999999999988764
No 87
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.27 E-value=3.1e-07 Score=52.82 Aligned_cols=31 Identities=23% Similarity=0.468 Sum_probs=28.2
Q ss_pred CCCeEEEcCCCceEEeeCCCCeeeCCCCCCC
Q psy2339 75 EGWDMATTAEGETYFINHTTRTTSWFDPRIP 105 (125)
Q Consensus 75 ~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~~ 105 (125)
..|.+..+.+|+.||+|..|++++|+.|.--
T Consensus 7 ~~W~e~~s~~G~~YYyN~~T~eS~WekP~~~ 37 (50)
T 2dk1_A 7 GRWVEGITSEGYHYYYDLISGASQWEKPEGF 37 (50)
T ss_dssp CCEEECCCSTTCCCEEESSSCCEESSCCTTC
T ss_pred CCeEEEECCCCCEEEEECCCCCEEeeCChhh
Confidence 3699999999999999999999999999753
No 88
>2dk1_A WW domain-binding protein 4; WBP-4, formin- binding protein 21, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=98.21 E-value=8.2e-07 Score=51.01 Aligned_cols=32 Identities=22% Similarity=0.469 Sum_probs=29.0
Q ss_pred CCcEEEECCCCCeEEeeCCCCceeccCCCCCC
Q psy2339 29 EGWDMATTAEGETYFINHTTRTTSWFDPRIPK 60 (125)
Q Consensus 29 ~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~~ 60 (125)
..|.++.+.+|+.||+|..|++++|++|....
T Consensus 7 ~~W~e~~s~~G~~YYyN~~T~eS~WekP~~~~ 38 (50)
T 2dk1_A 7 GRWVEGITSEGYHYYYDLISGASQWEKPEGFQ 38 (50)
T ss_dssp CCEEECCCSTTCCCEEESSSCCEESSCCTTCC
T ss_pred CCeEEEECCCCCEEEEECCCCCEEeeCChhhh
Confidence 36999999999999999999999999997653
No 89
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=97.54 E-value=0.00012 Score=51.86 Aligned_cols=34 Identities=29% Similarity=0.672 Sum_probs=30.5
Q ss_pred CCCCCCcEEEECC-CCCeEEeeCCCCceeccCCCC
Q psy2339 25 GPLPEGWDMATTA-EGETYFINHTTRTTSWFDPRI 58 (125)
Q Consensus 25 ~pLP~gWe~~~~~-~Gr~Yy~n~~T~~TtW~~P~~ 58 (125)
..||+||+.+.+. .|+.||+|..|+..+|..|..
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~~ 40 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYG 40 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCTT
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCccc
Confidence 3499999999986 699999999999999999864
No 90
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=97.38 E-value=0.00021 Score=50.57 Aligned_cols=33 Identities=30% Similarity=0.737 Sum_probs=29.9
Q ss_pred CCCCCCCeEEEcC-CCceEEeeCCCCeeeCCCCC
Q psy2339 71 GPLPEGWDMATTA-EGETYFINHTTRTTSWFDPR 103 (125)
Q Consensus 71 ~~LP~gWe~~~d~-~G~~yY~nh~t~~T~w~~Pr 103 (125)
..||.||+++.+. .|+.||+|..+++.+|+.|.
T Consensus 6 ~~lp~~w~~~~s~s~~~~Yy~~~~~~~~~~~~~~ 39 (177)
T 1yw5_A 6 TGLPPNWTIRVSRSHNKEYFLNQSTNESSWDPPY 39 (177)
T ss_dssp CCCCTTEEEEECSSTTCEEEEETTTCCEESSCCT
T ss_pred CCCCchHHHHhcccCCchhhhhHHHhhHhhcCcc
Confidence 4599999999984 79999999999999999985
No 91
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=96.62 E-value=0.0044 Score=37.91 Aligned_cols=37 Identities=27% Similarity=0.692 Sum_probs=33.7
Q ss_pred CCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCCC
Q psy2339 68 GSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 68 ~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
+...+||.||.......|-+.|++..|+..+|..|=+
T Consensus 24 ~~~~~LPeGW~~v~H~SGmP~YlH~~trV~T~SrPY~ 60 (79)
T 3le4_A 24 PPTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYF 60 (79)
T ss_dssp CCCCCCCTTEEEEECTTSSEEEEETTTTEEESSCCCC
T ss_pred CcCCcCCCccEEEEecCCceEEEeccceEEeccCCeE
Confidence 3456899999999999999999999999999999965
No 92
>3le4_A Microprocessor complex subunit DGCR8; WW motif, dimerization, 3D domain swapping, heme binding, MI processing, heme, iron, metal-binding, nucleus; 1.70A {Homo sapiens}
Probab=96.10 E-value=0.012 Score=35.99 Aligned_cols=37 Identities=27% Similarity=0.686 Sum_probs=32.8
Q ss_pred CCCCCCCCcEEEECCCCCeEEeeCCCCceeccCCCCC
Q psy2339 23 SLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPRIP 59 (125)
Q Consensus 23 ~~~pLP~gWe~~~~~~Gr~Yy~n~~T~~TtW~~P~~~ 59 (125)
...+||.||..-.-..|-.-|++..|+.-||.+|-..
T Consensus 25 ~~~~LPeGW~~v~H~SGmP~YlH~~trV~T~SrPY~l 61 (79)
T 3le4_A 25 PTEPLPDGWIMTFHNSGVPVYLHRESRVVTWSRPYFL 61 (79)
T ss_dssp CCCCCCTTEEEEECTTSSEEEEETTTTEEESSCCCCC
T ss_pred cCCcCCCccEEEEecCCceEEEeccceEEeccCCeEe
Confidence 3467999999998889999999999999999999664
No 93
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=74.84 E-value=5.3 Score=26.84 Aligned_cols=24 Identities=38% Similarity=0.774 Sum_probs=15.9
Q ss_pred CCCCCCcEEEEC--CCC------CeEEeeCCC
Q psy2339 25 GPLPEGWDMATT--AEG------ETYFINHTT 48 (125)
Q Consensus 25 ~pLP~gWe~~~~--~~G------r~Yy~n~~T 48 (125)
.+||.||+..+- .+| .+||++..-
T Consensus 36 ~~LP~GWkRe~~~RksG~Sagk~DVYY~SP~G 67 (133)
T 1ub1_A 36 PTLPEGWTRKLKQRKSGRSAGKYDVYLINPQG 67 (133)
T ss_dssp CCBTTBCEEEEEECCCSSSCCSEEEEEECTTS
T ss_pred CCCCCCCEEEEEEecCCCCCCceeEEEECCCC
Confidence 358999966542 333 589998753
No 94
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=74.60 E-value=3.9 Score=24.71 Aligned_cols=33 Identities=18% Similarity=0.315 Sum_probs=21.2
Q ss_pred CCCCCCCeEEEcC--------CCceEEeeCCCCeeeCCCCCC
Q psy2339 71 GPLPEGWDMATTA--------EGETYFINHTTRTTSWFDPRI 104 (125)
Q Consensus 71 ~~LP~gWe~~~d~--------~G~~yY~nh~t~~T~w~~Pr~ 104 (125)
+.||.||+..+-. ...+||++. +++.--..+.+
T Consensus 9 p~LP~GW~Re~~~R~~g~s~gk~DvyY~sP-~Gkk~RS~~ev 49 (75)
T 1d9n_A 9 PALGPGWKRREVFRKSGATCGRSDTYYQSP-TGDRIRSKVEL 49 (75)
T ss_dssp TTTCSSCEEEECSSSSSCTTCCCCEEEECS-SSCEECSTHHH
T ss_pred CCCCCCCEEEEEEecCCCCCCceEEEEECC-CCCeeecHHHH
Confidence 4699999877632 346899998 45443444433
No 95
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=72.59 E-value=7.3 Score=26.16 Aligned_cols=27 Identities=33% Similarity=0.678 Sum_probs=18.2
Q ss_pred CCCCCCCCCeEEEc--CCC------ceEEeeCCCC
Q psy2339 69 SLGPLPEGWDMATT--AEG------ETYFINHTTR 95 (125)
Q Consensus 69 ~~~~LP~gWe~~~d--~~G------~~yY~nh~t~ 95 (125)
....||.||+..+- ..| .+|||+..-+
T Consensus 34 ~~~~LP~GWkRe~~~RksG~Sagk~DVYY~SP~GK 68 (133)
T 1ub1_A 34 DDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGK 68 (133)
T ss_dssp CCCCBTTBCEEEEEECCCSSSCCSEEEEEECTTSC
T ss_pred CCCCCCCCCEEEEEEecCCCCCCceeEEEECCCCC
Confidence 34579999976653 232 5899988533
No 96
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=71.58 E-value=3.8 Score=24.52 Aligned_cols=25 Identities=20% Similarity=0.671 Sum_probs=17.0
Q ss_pred CCCCCCCeEEEc--C------CCceEEeeCCCC
Q psy2339 71 GPLPEGWDMATT--A------EGETYFINHTTR 95 (125)
Q Consensus 71 ~~LP~gWe~~~d--~------~G~~yY~nh~t~ 95 (125)
++||.||+..+- . .+.+||+...-+
T Consensus 11 p~Lp~GW~R~~~~R~~g~s~~k~DvyY~sP~Gk 43 (72)
T 2ky8_A 11 PALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGK 43 (72)
T ss_dssp SSSCTTCEEEEEECCSSTTTTCEEEEEECTTCC
T ss_pred CCCCCCCEEEEEEecCCCCCCceEEEEECCCCC
Confidence 468999987763 2 235899988433
No 97
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=71.39 E-value=5.8 Score=25.20 Aligned_cols=30 Identities=27% Similarity=0.387 Sum_probs=19.2
Q ss_pred CCCCCCCCeEEEc--CC------CceEEeeCCCCeeeCC
Q psy2339 70 LGPLPEGWDMATT--AE------GETYFINHTTRTTSWF 100 (125)
Q Consensus 70 ~~~LP~gWe~~~d--~~------G~~yY~nh~t~~T~w~ 100 (125)
...||.||+..+- .. ..+|||+. +++.--.
T Consensus 21 ~~~lP~GW~re~~~R~~G~s~gk~DvYY~sP-~GkkfRS 58 (97)
T 3c2i_A 21 DPTLPEGWTRKLKQRKSGRSAGKYDVYLINP-QGKAFRS 58 (97)
T ss_dssp CTTSCTTCEEEEEECCSSTTTTCEEEEEECT-TSCEECS
T ss_pred CCCCCCCCEEEEEEecCCCCCCcceEEEECC-CCCEEEC
Confidence 3569999976653 22 36899998 4544333
No 98
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=70.92 E-value=4.5 Score=23.99 Aligned_cols=24 Identities=33% Similarity=0.843 Sum_probs=16.0
Q ss_pred CCCCCCcEEEEC--CCC------CeEEeeCCC
Q psy2339 25 GPLPEGWDMATT--AEG------ETYFINHTT 48 (125)
Q Consensus 25 ~pLP~gWe~~~~--~~G------r~Yy~n~~T 48 (125)
.+||.||+..+- ..| .+||+...-
T Consensus 4 ~plp~GW~R~~~~R~~G~s~gk~DvyY~sP~G 35 (69)
T 3vxv_A 4 KPVPCGWERVVKQRLSGKTAGKFDVYFISPQG 35 (69)
T ss_dssp CCSCTTCEEEEEECCSSTTTTCEEEEEECTTS
T ss_pred CcCCCCCEEEEEEeccCCCCCcceEEEEcCCC
Confidence 579999966542 222 589987553
No 99
>1h8g_A Major autolysin; choline-binding domain, cell WALL attachment; 2.4A {Streptococcus pneumoniae} SCOP: b.109.1.1
Probab=40.56 E-value=37 Score=20.76 Aligned_cols=18 Identities=22% Similarity=0.702 Sum_probs=10.9
Q ss_pred CCCCcEEEECCCCCeEEeeCC
Q psy2339 27 LPEGWDMATTAEGETYFINHT 47 (125)
Q Consensus 27 LP~gWe~~~~~~Gr~Yy~n~~ 47 (125)
+-.||... +|+-||++..
T Consensus 14 ~~tGW~~i---~g~wYYf~~~ 31 (95)
T 1h8g_A 14 MATGWKKI---ADKWYYFNEE 31 (95)
T ss_dssp BCCEEEEE---TTEEEEECTT
T ss_pred EEEeEEEE---CCEEEEECCC
Confidence 44567543 5777777643
No 100
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=38.72 E-value=53 Score=24.93 Aligned_cols=61 Identities=11% Similarity=0.075 Sum_probs=39.6
Q ss_pred CCCCCeEEeeCCCCceeccCCCCC-CCCCCCCCCCCCCCC-CCCeEEE--cCCCceEEeeCCCCeeeC
Q psy2339 36 TAEGETYFINHTTRTTSWFDPRIP-KPSGSVSPGSLGPLP-EGWDMAT--TAEGETYFINHTTRTTSW 99 (125)
Q Consensus 36 ~~~Gr~Yy~n~~T~~TtW~~P~~~-~~~~~~~~~~~~~LP-~gWe~~~--d~~G~~yY~nh~t~~T~w 99 (125)
+.+|++|-+|..|++..|.-.... .+.-. ...+..+ .+-.... ..+|+.|.++..++...|
T Consensus 17 t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~---~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~ 81 (339)
T 2be1_A 17 DVEGGLHAVDRRNGHIIWSIEPENFQPLIE---IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL 81 (339)
T ss_dssp ETTSCEEEEETTTTEEEEEECGGGSCCSEE---CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEecCCccCCcEE---ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe
Confidence 678999999999999999865430 00000 0001111 3344444 469999999999987777
No 101
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=38.16 E-value=57 Score=23.67 Aligned_cols=60 Identities=13% Similarity=0.039 Sum_probs=33.2
Q ss_pred CCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCC
Q psy2339 38 EGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDP 102 (125)
Q Consensus 38 ~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~P 102 (125)
+|.+|.++..|++..|..+....... ....+-.+--...+.+|..|.+|..+++..|...
T Consensus 286 ~g~l~~~d~~tG~~~w~~~~~~~~~~-----~~~~~~~~~l~v~~~~g~l~~~d~~tG~~~~~~~ 345 (376)
T 3q7m_A 286 NDRVMALTIDGGVTLWTQSDLLHRLL-----TSPVLYNGNLVVGDSEGYLHWINVEDGRFVAQQK 345 (376)
T ss_dssp TCCEEEEETTTCCEEEEECTTTTSCC-----CCCEEETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECCCCcEEEeecccCCCcc-----cCCEEECCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 45566666666666665542211000 0011112333344678899999999999888543
No 102
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=34.37 E-value=47 Score=24.14 Aligned_cols=62 Identities=16% Similarity=0.291 Sum_probs=40.0
Q ss_pred CCCCCeEEeeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCceEEeeCCCCeeeCCCCC
Q psy2339 36 TAEGETYFINHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGETYFINHTTRTTSWFDPR 103 (125)
Q Consensus 36 ~~~Gr~Yy~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~~yY~nh~t~~T~w~~Pr 103 (125)
+.+|.+|-+|..|++..|......... ..+.+-.+--..-+.+|..|-+|..|++..|....
T Consensus 110 ~~~g~l~a~d~~tG~~~W~~~~~~~~~------~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 110 SEKAQVYALNTSDGTVAWQTKVAGEAL------SRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSSCCC------SCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCCCEEEEEECCCCCEEEEEeCCCceE------cCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 346788889999999999775432111 00112233333345688899999999999996543
No 103
>3hia_A Choline binding protein; beta hairpin; 2.38A {Streptococcus pneumoniae}
Probab=32.54 E-value=66 Score=19.58 Aligned_cols=18 Identities=33% Similarity=0.697 Sum_probs=11.0
Q ss_pred CCCCcEEEECCCCCeEEeeCC
Q psy2339 27 LPEGWDMATTAEGETYFINHT 47 (125)
Q Consensus 27 LP~gWe~~~~~~Gr~Yy~n~~ 47 (125)
...+|... +|.-||++..
T Consensus 14 ~~~~W~~~---~g~WYy~~~~ 31 (94)
T 3hia_A 14 PTTGWKQE---NGMWYFYNTD 31 (94)
T ss_dssp CCCEEEEE---TTEEEEECTT
T ss_pred ccCCeEEE---CCEEEEECCC
Confidence 44567653 4777777644
No 104
>1hcx_A Major autolysin; choline-binding domain, cell WALL attachment; HET: TPT DDQ; 2.6A {Streptococcus pneumoniae} SCOP: b.109.1.1 PDB: 1gvm_A* 2bml_A*
Probab=24.46 E-value=87 Score=20.08 Aligned_cols=9 Identities=11% Similarity=0.549 Sum_probs=5.2
Q ss_pred CCceEEeeC
Q psy2339 84 EGETYFINH 92 (125)
Q Consensus 84 ~G~~yY~nh 92 (125)
+|..||++.
T Consensus 74 ~g~wYY~~~ 82 (127)
T 1hcx_A 74 KDTWYYLDA 82 (127)
T ss_dssp TTEEEEECT
T ss_pred CCEEEEEeC
Confidence 455666654
No 105
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=22.79 E-value=50 Score=19.73 Aligned_cols=17 Identities=18% Similarity=0.562 Sum_probs=14.4
Q ss_pred CCCCCCcEEEECCCCCe
Q psy2339 25 GPLPEGWDMATTAEGET 41 (125)
Q Consensus 25 ~pLP~gWe~~~~~~Gr~ 41 (125)
.++|..|+..++.+|.-
T Consensus 6 ~~~p~dW~VsRt~dGdY 22 (76)
T 2rp4_A 6 DDSAAEWNVSRTPDGDY 22 (76)
T ss_dssp CCSSCCCEEECCTTTBE
T ss_pred CCCCccceeeeccCCce
Confidence 44899999999999963
No 106
>2khr_A Protein MBTH; siderophores, mycobactin, MTBH-like, 2-hydroxyphenyloxazolin tuberculosis, biosynthetic protein, structural genomics; NMR {Mycobacterium tuberculosis}
Probab=20.77 E-value=1.4e+02 Score=17.68 Aligned_cols=29 Identities=17% Similarity=0.499 Sum_probs=18.8
Q ss_pred eeCCCCceeccCCCCCCCCCCCCCCCCCCCCCCCeEEEcCCCc
Q psy2339 44 INHTTRTTSWFDPRIPKPSGSVSPGSLGPLPEGWDMATTAEGE 86 (125)
Q Consensus 44 ~n~~T~~TtW~~P~~~~~~~~~~~~~~~~LP~gWe~~~d~~G~ 86 (125)
+|+.-+=+-|-.- -.+|.||.....+..|
T Consensus 20 vN~E~QySLWP~~--------------~~vP~GW~~v~~~~sr 48 (74)
T 2khr_A 20 VNDEDQHSLWPVF--------------ADIPAGWRVVHGEASR 48 (74)
T ss_dssp EETTCSCEEEETT--------------SCCCSSEEEEECSCCH
T ss_pred EcCCCccccCcCc--------------CCCCCCcccCCCCCCH
Confidence 4666665666432 2489999988866543
Done!