BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2347
(207 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|126002576|ref|XP_001382208.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|195146834|ref|XP_002014389.1| GL18979 [Drosophila persimilis]
gi|54640338|gb|EAL29321.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|194106342|gb|EDW28385.1| GL18979 [Drosophila persimilis]
Length = 196
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 116/208 (55%), Gaps = 27/208 (12%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
M+ +RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE
Sbjct: 1 MTSMTDQRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRD 120
ACD +N +L+GS+LRVEIS+GR R GG RG RG + GG+R
Sbjct: 61 KACDILNGSELLGSQLRVEISKGRPRQSRRGGSS----ERGRRGDFGRHSINSSNGGFRQ 116
Query: 121 GGDRFGGGGRGRGDGGFRGSRGGGGYRG---------GRDEYGGGRGGGGYRGGRD-SRG 170
G + G+ R G GY G RD YGGGR G Y G S G
Sbjct: 117 VRGS-SGSSSRHAERGYSSGRSGAGYSGRDSGSNGFSRRDVYGGGRDGSRYSSGNSTSYG 175
Query: 171 FDGGKPDYYNGGGGGRGGGGRFRSRSPV 198
GG+ GG RFRSRSPV
Sbjct: 176 RSGGQ------------GGCRFRSRSPV 191
>gi|91080449|ref|XP_969323.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270005570|gb|EFA02018.1| hypothetical protein TcasGA2_TC007641 [Tribolium castaneum]
Length = 185
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 69/79 (87%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
ER RVYVGGLT++VKKEDLE EFEK+GKLNSVWVAFNPPGFAF+EF N DAE+ACDS+
Sbjct: 6 ERSARVYVGGLTDSVKKEDLETEFEKYGKLNSVWVAFNPPGFAFIEFINHSDAESACDSL 65
Query: 67 NDQDLMGSKLRVEISRGRG 85
N D +GSKLRVEI+RG+
Sbjct: 66 NGTDFLGSKLRVEIARGKS 84
>gi|403183501|gb|EJY58142.1| AAEL017030-PA [Aedes aegypti]
Length = 193
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 74/84 (88%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
E+GTRVYVG LT+ VKKEDLE EF K+GKLNSVWVAFNPPGFAF+EF N+ +AE+ACD++
Sbjct: 4 EKGTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNL 63
Query: 67 NDQDLMGSKLRVEISRGRGRGRGG 90
N QD++GSKLRVEIS+GR RGG
Sbjct: 64 NGQDILGSKLRVEISKGRRNPRGG 87
>gi|195119159|ref|XP_002004099.1| GI19446 [Drosophila mojavensis]
gi|193914674|gb|EDW13541.1| GI19446 [Drosophila mojavensis]
Length = 196
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 117/208 (56%), Gaps = 27/208 (12%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
M+D +RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE
Sbjct: 1 MTD---QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAE 57
Query: 61 AACDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRD 120
ACD +N +L+GS+LRVEIS+GR R GG G R G G GG+R
Sbjct: 58 KACDILNGSELLGSQLRVEISKGRPRQGRRGGPGE--RGRRGDVGRHSITSSSSNGGFR- 114
Query: 121 GGDRFGGGGRGRGDGGFRGSRGGGGYRGGRDE--YGGGRGGGG--------YRGGRDSRG 170
+ RG GY GR YGG R GG Y G R+S
Sbjct: 115 ---------QQRGSSSSSSRHLDRGYSSGRSSTAYGGARDGGSNGFNRRDIYNGTRESSR 165
Query: 171 FDGGKPDYYNGGGGGRGGGGRFRSRSPV 198
+ GG Y+ GG GGRFRSRSPV
Sbjct: 166 YGGGTSSSYSRSGG--QSGGRFRSRSPV 191
>gi|312384272|gb|EFR29035.1| hypothetical protein AND_02328 [Anopheles darlingi]
Length = 556
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 71/83 (85%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
+GTRVYVG LT+ VKKEDLE EF K+GKLNSVWVAFNPPGFAF+EF N+ +AE ACD++N
Sbjct: 5 KGTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKDEAETACDNLN 64
Query: 68 DQDLMGSKLRVEISRGRGRGRGG 90
QD++GSKLRVEIS+GR RG
Sbjct: 65 GQDILGSKLRVEISKGRRNPRGA 87
>gi|170035265|ref|XP_001845491.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877141|gb|EDS40524.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 197
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 69/76 (90%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
++GTRVYVG LT+ VKKEDLE EF K+GKLNSVWVAFNPPGFAF+EF N+ +AE+ACD++
Sbjct: 4 QKGTRVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPPGFAFIEFENKEEAESACDNL 63
Query: 67 NDQDLMGSKLRVEISR 82
N QD++GSKLRVEIS+
Sbjct: 64 NGQDILGSKLRVEISK 79
>gi|242025305|ref|XP_002433066.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
gi|212518582|gb|EEB20328.1| arginine/serine-rich splicing factor, putative [Pediculus humanus
corporis]
Length = 216
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 57/74 (77%), Positives = 66/74 (89%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+RGTRVYVGGL++ KKEDLE EFEKFGKLN+VWVAFNPPGFAF+EFSN+ DAE ACDSM
Sbjct: 15 QRGTRVYVGGLSQGTKKEDLESEFEKFGKLNNVWVAFNPPGFAFIEFSNKTDAENACDSM 74
Query: 67 NDQDLMGSKLRVEI 80
N +L+G KLRVE+
Sbjct: 75 NGTELLGGKLRVEL 88
>gi|322798568|gb|EFZ20180.1| hypothetical protein SINV_12527 [Solenopsis invicta]
Length = 199
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 113/203 (55%), Gaps = 31/203 (15%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRVYVGGL E++KKEDL++EFEK+GKLN VWVAFNPPGFAF+EF N +AE AC +MN
Sbjct: 11 TRVYVGGLNESIKKEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGM 70
Query: 70 DLMGSKLRVEISRGRGRG----------RGGGGRGGR-FDSRGG-RGGYRGGG-GGYGGG 116
++MG+KLRVEISRGRGRG R G G R F SRGG GYRG YGG
Sbjct: 71 EIMGAKLRVEISRGRGRGGGRGGGAGGFRSNRGVGSRDFGSRGGTTAGYRGSTYADYGGS 130
Query: 117 GYRDGGDRFGGGGRGRGDGGFRGSRGGGGYRG-GRDEYGGGRGGGGYRGGRDSRGFDGGK 175
Y G G GR D + S G G +D YGG G G
Sbjct: 131 YYTGRGGASRGRGRYGEDYMYNRSSGYVTRDGYTQDVYGGSSGDTG-------------- 176
Query: 176 PDYYNGGGGGRGGGGRFRSRSPV 198
DYY G R+RSRSP
Sbjct: 177 ADYYTGKDTST---ARYRSRSPA 196
>gi|2815290|emb|CAA05719.1| P23 protein [Chironomus tentans]
gi|3954793|emb|CAA06034.1| hnRNP protein [Chironomus tentans]
Length = 191
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/78 (71%), Positives = 69/78 (88%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
ERGTRVYVG LT+ VKKE LE EF +FGKLNSVW+A NPPGFAF+EF+N+ +A +ACDS+
Sbjct: 4 ERGTRVYVGNLTDKVKKEQLEEEFTRFGKLNSVWLAHNPPGFAFIEFANKDEAISACDSL 63
Query: 67 NDQDLMGSKLRVEISRGR 84
N Q+L+GSKLRVEIS+G+
Sbjct: 64 NGQELLGSKLRVEISKGK 81
>gi|380011044|ref|XP_003689623.1| PREDICTED: uncharacterized protein LOC100871916 [Apis florea]
Length = 201
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/191 (51%), Positives = 112/191 (58%), Gaps = 12/191 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRVYVGGL E++KKEDL+ EFEK+GKLN VWVAFNPPGFAF+EF N +AE AC SMN
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 70 DLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRG-GYRGGGGGYGGGGYRDGGDRFGGG 128
++MG+KLRVEISRGRGRG G GG GG +RGG GY G YR G+
Sbjct: 67 EIMGAKLRVEISRGRGRGGGRGGMGGFRGNRGGAARGY--GSAASIAFNYR--GNNMYAD 122
Query: 129 GRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGGYRGGRDSRGFDGGKP--DYYNGGGGGR 186
G G GSR Y G D G R G ++ G P DYYN G
Sbjct: 123 YGGYYAGKGGGSRSRDYY--GEDYMTNRASGYVTRDGYTQDVYNSGDPNADYYNNKG--- 177
Query: 187 GGGGRFRSRSP 197
G R+RSRSP
Sbjct: 178 TGTSRYRSRSP 188
>gi|332026868|gb|EGI66971.1| RNA-binding protein Rsf1 [Acromyrmex echinatior]
Length = 258
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 113/202 (55%), Gaps = 31/202 (15%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRVYVGGL E++KKEDL++EFEK+GKLN VWVAFNPPGFAF+EF N +AE AC +MN
Sbjct: 7 TRVYVGGLNESIKKEDLQMEFEKYGKLNKVWVAFNPPGFAFIEFFNMNEAELACCNMNGM 66
Query: 70 DLMGSKLRVEISRGRGRGRGGGGRGGR-----------FDSRGG-RGGYRGGG-GGYGGG 116
++MG+KLRVEISRGRGRG G GG G F SRGG GYRG YGG
Sbjct: 67 EIMGAKLRVEISRGRGRGGGRGGGAGGFRGNRGVGSRDFGSRGGTTAGYRGSTYADYGGS 126
Query: 117 GYRDGGDRFGGGGRGRGDGGFRGSRGGGGYRG-GRDEYGGGRGGGGYRGGRDSRGFDGGK 175
Y G G GR D + S G G +D YGG G G
Sbjct: 127 YYTGRGGASRGRGRYGEDYMYNRSSGYVTRDGYTQDVYGGSSGDTG-------------- 172
Query: 176 PDYYNGGGGGRGGGGRFRSRSP 197
DYY G R+RSRSP
Sbjct: 173 ADYYTGKD---TSTARYRSRSP 191
>gi|340712414|ref|XP_003394755.1| PREDICTED: hypothetical protein LOC100651873 [Bombus terrestris]
gi|350399719|ref|XP_003485617.1| PREDICTED: hypothetical protein LOC100747513 [Bombus impatiens]
Length = 201
Score = 124 bits (310), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRVYVGGL E++KKEDL+ EFEK+GKLN VWVAFNPPGFAF+EF N +AE AC SMN
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 70 DLMGSKLRVEIS 81
++MG+KLRVEIS
Sbjct: 67 EIMGAKLRVEIS 78
>gi|195053219|ref|XP_001993524.1| GH13017 [Drosophila grimshawi]
gi|193900583|gb|EDV99449.1| GH13017 [Drosophila grimshawi]
Length = 201
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
M+D +RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE
Sbjct: 1 MTD---QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAE 57
Query: 61 AACDSMNDQDLMGSKLRVEISR 82
ACD +N +L+GS+LRVEIS+
Sbjct: 58 KACDILNGSELLGSQLRVEISK 79
>gi|383856885|ref|XP_003703937.1| PREDICTED: uncharacterized protein LOC100879230 [Megachile
rotundata]
Length = 183
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 62/72 (86%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRVYVGGL E++KKEDL+ EFEK+GKLN VW+AFNPPGFAF+EF N +AE AC SMN
Sbjct: 13 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWIAFNPPGFAFIEFLNMNEAELACSSMNGT 72
Query: 70 DLMGSKLRVEIS 81
++MG+KLRVEIS
Sbjct: 73 EIMGAKLRVEIS 84
>gi|195450476|ref|XP_002072511.1| GK12439 [Drosophila willistoni]
gi|194168596|gb|EDW83497.1| GK12439 [Drosophila willistoni]
Length = 192
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MSD +RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE
Sbjct: 1 MSD---QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAE 57
Query: 61 AACDSMNDQDLMGSKLRVEISR 82
ACD +N +L+GS+LRVEIS+
Sbjct: 58 KACDILNGSELLGSQLRVEISK 79
>gi|328779834|ref|XP_396951.3| PREDICTED: hypothetical protein LOC413508 [Apis mellifera]
Length = 178
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRVYVGGL E++KKEDL+ EFEK+GKLN VWVAFNPPGFAF+EF N +AE AC SMN
Sbjct: 7 TRVYVGGLNESIKKEDLQTEFEKYGKLNKVWVAFNPPGFAFIEFLNMNEAELACSSMNGT 66
Query: 70 DLMGSKLRVEIS 81
++MG+KLRVEIS
Sbjct: 67 EIMGAKLRVEIS 78
>gi|194859678|ref|XP_001969428.1| GG23961 [Drosophila erecta]
gi|195473557|ref|XP_002089059.1| GE26241 [Drosophila yakuba]
gi|190661295|gb|EDV58487.1| GG23961 [Drosophila erecta]
gi|194175160|gb|EDW88771.1| GE26241 [Drosophila yakuba]
Length = 200
Score = 122 bits (306), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 66/76 (86%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE ACD +
Sbjct: 7 QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDIL 66
Query: 67 NDQDLMGSKLRVEISR 82
N +L+GS+LRVEIS+
Sbjct: 67 NGSELLGSQLRVEISK 82
>gi|24583292|ref|NP_477001.2| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|442627179|ref|NP_001260318.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
gi|195339711|ref|XP_002036460.1| GM11879 [Drosophila sechellia]
gi|195578095|ref|XP_002078901.1| GD22286 [Drosophila simulans]
gi|7297638|gb|AAF52890.1| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|17945878|gb|AAL48985.1| RE39606p [Drosophila melanogaster]
gi|194130340|gb|EDW52383.1| GM11879 [Drosophila sechellia]
gi|194190910|gb|EDX04486.1| GD22286 [Drosophila simulans]
gi|220948492|gb|ACL86789.1| Rsf1-PA [synthetic construct]
gi|220957768|gb|ACL91427.1| Rsf1-PA [synthetic construct]
gi|440213636|gb|AGB92853.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
Length = 200
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 66/76 (86%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE ACD +
Sbjct: 7 QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDIL 66
Query: 67 NDQDLMGSKLRVEISR 82
N +L+GS+LRVEIS+
Sbjct: 67 NGSELLGSQLRVEISK 82
>gi|3929381|sp|Q24491.1|RX21_DROME RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding
protein Rox21
gi|606749|gb|AAA73521.1| RNA binding protein [Drosophila melanogaster]
Length = 197
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 66/76 (86%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE ACD +
Sbjct: 4 QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDIL 63
Query: 67 NDQDLMGSKLRVEISR 82
N +L+GS+LRVEIS+
Sbjct: 64 NGSELLGSQLRVEISK 79
>gi|195387425|ref|XP_002052396.1| GJ17527 [Drosophila virilis]
gi|194148853|gb|EDW64551.1| GJ17527 [Drosophila virilis]
Length = 198
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%), Gaps = 3/82 (3%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
M+D +RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE
Sbjct: 1 MTD---QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAE 57
Query: 61 AACDSMNDQDLMGSKLRVEISR 82
ACD +N +L+GS+LRVEIS+
Sbjct: 58 KACDILNGSELLGSQLRVEISK 79
>gi|194761708|ref|XP_001963070.1| GF14123 [Drosophila ananassae]
gi|190616767|gb|EDV32291.1| GF14123 [Drosophila ananassae]
Length = 192
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 66/76 (86%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+RGTRVYVG LT+ VKK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE ACD +
Sbjct: 4 QRGTRVYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDIL 63
Query: 67 NDQDLMGSKLRVEISR 82
N +L+GS+LRVEIS+
Sbjct: 64 NGSELLGSQLRVEISK 79
>gi|289740733|gb|ADD19114.1| repressor splicing factor 1 [Glossina morsitans morsitans]
Length = 186
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 66/76 (86%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+RGTRVYVG LT+ +KK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE ACD +
Sbjct: 4 QRGTRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVL 63
Query: 67 NDQDLMGSKLRVEISR 82
N +L+GS+LRVEIS+
Sbjct: 64 NGTELLGSQLRVEISK 79
>gi|345488330|ref|XP_001605989.2| PREDICTED: hypothetical protein LOC100122382 [Nasonia
vitripennis]
Length = 188
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 51/71 (71%), Positives = 62/71 (87%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
RVYVGGL E++KKEDL+++FEKFGKLN VWVAFNPPGFAF+EF N +AE AC +MN +
Sbjct: 8 RVYVGGLNESIKKEDLQMQFEKFGKLNKVWVAFNPPGFAFIEFFNMDEAEEACSNMNGTE 67
Query: 71 LMGSKLRVEIS 81
+MG+KLRVEIS
Sbjct: 68 IMGAKLRVEIS 78
>gi|289739371|gb|ADD18433.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 168
Score = 119 bits (298), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 53/76 (69%), Positives = 66/76 (86%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+RGTRVYVG LT+ +KK+DLE EF K+GKLNSVW+AFNPPGFAFVEF ++ DAE ACD +
Sbjct: 4 QRGTRVYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEKACDVL 63
Query: 67 NDQDLMGSKLRVEISR 82
N +L+GS+LRVEIS+
Sbjct: 64 NGTELLGSQLRVEISK 79
>gi|321456059|gb|EFX67176.1| hypothetical protein DAPPUDRAFT_18244 [Daphnia pulex]
Length = 79
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 63/79 (79%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
RVYVG + E VKKEDLE+EF K+GKL S WVAFNPPGFAF+EF ++ DA+ A SMN D
Sbjct: 1 RVYVGSILENVKKEDLEVEFGKYGKLTSAWVAFNPPGFAFIEFEDESDAQEAVASMNGTD 60
Query: 71 LMGSKLRVEISRGRGRGRG 89
MGSK+RVEIS RGRGRG
Sbjct: 61 FMGSKIRVEISPNRGRGRG 79
>gi|389608769|dbj|BAM17996.1| repressor splicing factor 1 [Papilio xuthus]
Length = 158
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 63/76 (82%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GTRVYVGGL E +KKEDLE EF+K+GKLNSVWVA NPPGFAF+EF N +AE AC +MN
Sbjct: 5 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNG 64
Query: 69 QDLMGSKLRVEISRGR 84
+++G+ L+VE+SR R
Sbjct: 65 FEMLGATLKVELSRKR 80
>gi|112983080|ref|NP_001037670.1| repressor splicing factor 1 [Bombyx mori]
gi|95115206|gb|ABF55969.1| Rsf1 [Bombyx mori]
Length = 143
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 61/74 (82%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GTRVYVGGL E +KKEDLE EF K+GKLNSVWVA NPPGFAF+EF N +AE AC +MN
Sbjct: 5 GTRVYVGGLVEGIKKEDLEREFAKYGKLNSVWVALNPPGFAFIEFENLQEAEDACSAMNG 64
Query: 69 QDLMGSKLRVEISR 82
+++G+ L+VEISR
Sbjct: 65 TEMLGATLKVEISR 78
>gi|357620751|gb|EHJ72823.1| repressor splicing factor 1 [Danaus plexippus]
Length = 151
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 63/76 (82%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GTRVYVGGL E +KKEDLE EF+K+GKLNSVWVA NPPGFAF+EF N +AE AC +MN
Sbjct: 5 GTRVYVGGLVEGIKKEDLEREFDKYGKLNSVWVALNPPGFAFIEFENMQEAEDACSAMNG 64
Query: 69 QDLMGSKLRVEISRGR 84
+++G+ L+VE+SR R
Sbjct: 65 FEMLGATLKVELSRKR 80
>gi|391348702|ref|XP_003748583.1| PREDICTED: uncharacterized protein LOC100904296 [Metaseiulus
occidentalis]
Length = 236
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
++ R++VGGLT+ + KEDLE EF K+GKLN VWVA NPPGFAF+EF ++ DA AC+ M
Sbjct: 71 DQSNRIFVGGLTDGIVKEDLEREFSKYGKLNHVWVAQNPPGFAFIEFDDERDASEACNEM 130
Query: 67 NDQDLMGSKLRVEIS 81
N ++ G LRVE S
Sbjct: 131 NGANVNGCTLRVEPS 145
>gi|197210363|gb|ACH48189.1| alternative splicing factor SRp20/9G8 [Haplopelma schmidti]
Length = 139
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
+ T ++VGGL +++ KEDLE EF KFGKLN VWVA NPPGFAF+EF + DA A MN
Sbjct: 2 KPTSIFVGGLNDSIDKEDLEREFSKFGKLNHVWVARNPPGFAFIEFDDDEDANEAIREMN 61
Query: 68 DQDLMGSKLRVEISRG 83
+ GS++RV++SR
Sbjct: 62 GATINGSEIRVDMSRN 77
>gi|318087272|gb|ADV40228.1| putative alternative splicing factor SRp20/9G8 [Latrodectus
hesperus]
Length = 165
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 51/72 (70%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
T +YVGGL E V+KEDLE EF K+G L VWVA NPPGFAF+EF + DA A MN
Sbjct: 4 TSLYVGGLGEDVQKEDLEREFGKYGNLTKVWVARNPPGFAFIEFEDDQDANEAIKEMNGA 63
Query: 70 DLMGSKLRVEIS 81
+ GS++RV+IS
Sbjct: 64 SINGSEIRVDIS 75
>gi|427796305|gb|JAA63604.1| Putative alternative splicing factor srp20/9g8 rrm superfamily,
partial [Rhipicephalus pulchellus]
Length = 188
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TR++VGGL + + K+DLE EF K+G+LN VWVA NPPGFAF+EF + DA+ A +MN
Sbjct: 8 TRIFVGGLGDNMAKDDLEREFGKYGRLNQVWVAQNPPGFAFLEFDDDRDADEAIRNMNGV 67
Query: 70 DLMGSKLRVEISR 82
L GS+LRVE SR
Sbjct: 68 VLNGSRLRVEYSR 80
>gi|291224719|ref|XP_002732349.1| PREDICTED: rbp1-like RNA-binding protein PB-like [Saccoglossus
kowalevskii]
Length = 247
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+R+YVG L V+KEDLE EF KFG++ +W+A NPPGFAF+EF + DA+ A S++
Sbjct: 3 ASRIYVGDLRPDVRKEDLEKEFGKFGRVVDIWIARNPPGFAFLEFDSPKDADVAVRSLDG 62
Query: 69 QDLMGSKLRVEIS 81
+ + GS++RVEIS
Sbjct: 63 KSVCGSRVRVEIS 75
>gi|256087165|ref|XP_002579746.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360042833|emb|CCD78243.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 279
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS G E+ ++Y+GGL E + K+DL E K G+L VWVA NPPGFAF E+ DAE
Sbjct: 1 MSSGFQEKCRKLYIGGLVENILKDDLVRELSKCGELVDVWVARNPPGFAFAEYVRSSDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISRGRGRGRGGGG 92
A S+N ++ GS++RVE + G GR + G
Sbjct: 61 KAVRSLNGVNVCGSRIRVEFAHG-GRTKSAIG 91
>gi|226467596|emb|CAX69674.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 284
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 54/83 (65%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS G E+ ++Y+GGL E V KEDL E K G++ VWVA NPPGFAF E+ DAE
Sbjct: 1 MSSGFQEKCRKLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISRG 83
A S++ ++ GS++RVE + G
Sbjct: 61 KAVRSLDGVNVCGSRIRVEFAHG 83
>gi|56756196|gb|AAW26273.1| unknown [Schistosoma japonicum]
Length = 224
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 73/138 (52%), Gaps = 16/138 (11%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS G E+ ++Y+GGL E V KEDL E K G++ VWVA NPPGFAF E+ DAE
Sbjct: 1 MSSGFQEKCRKLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISRGRGRGRGG---GGRGGRFDSRGGRGGYR--------GG 109
A S++ ++ GS++RVE + G GR + RGGR GRG R G
Sbjct: 61 KAVRSLDGVNVCGSRIRVEFAHG-GRSKSAVRSAFRGGR---PVGRGSLRRRNSPRRNGR 116
Query: 110 GGGYGGGGYRDGGDRFGG 127
Y G Y D D+F
Sbjct: 117 NSSYDGHRYPD-HDQFSS 133
>gi|56755711|gb|AAW26034.1| SJCHGC01826 protein [Schistosoma japonicum]
Length = 220
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 73/138 (52%), Gaps = 16/138 (11%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS G E+ ++Y+GGL E V KEDL E K G++ VWVA NPPGFAF E+ DAE
Sbjct: 1 MSSGFQEKCRKLYIGGLVENVLKEDLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISRGRGRGRGG---GGRGGRFDSRGGRGGYR--------GG 109
A S++ ++ GS++RVE + G GR + RGGR GRG R G
Sbjct: 61 KAVRSLDGVNVCGSRIRVEFAHG-GRSKSAVRSAFRGGR---PVGRGSLRRRNSPRRNGR 116
Query: 110 GGGYGGGGYRDGGDRFGG 127
Y G Y D D+F
Sbjct: 117 NSSYDGHRYPD-HDQFSS 133
>gi|241648488|ref|XP_002410067.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
gi|215501503|gb|EEC10997.1| alternative splicing factor SRp20/9G8, putative [Ixodes scapularis]
Length = 241
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 53/76 (69%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRV+VGGL + + KE+LE EF K+G L+ VWVA NPPGFAFVEF + DA A MN
Sbjct: 77 TRVFVGGLGDNMAKEELEREFSKYGHLSQVWVAQNPPGFAFVEFDDDRDANEAIRQMNGF 136
Query: 70 DLMGSKLRVEISRGRG 85
L G KLRVE SR RG
Sbjct: 137 VLNGCKLRVEHSRERG 152
>gi|198422993|ref|XP_002121806.1| PREDICTED: zinc finger (CCHC)-24 isoform 1 [Ciona intestinalis]
Length = 230
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDS 65
M R T++YVG L+ + + DLE EFE +G+L +VWVA +PPGFA+VEF + DA+ A
Sbjct: 1 MARDTKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKG 60
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGG 90
++ ++L G ++RVE S G R RG
Sbjct: 61 LDGKELHGRRIRVERSHGMPRNRGS 85
>gi|72167806|ref|XP_789638.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 215
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
ERG +VYVG L E+ K +LE EF FG L SVW+A NPPGFAFVEF + DA A +
Sbjct: 55 ERGCKVYVGNLGESASKSELEKEFGSFGPLKSVWIARNPPGFAFVEFDDPRDASDAVKDL 114
Query: 67 NDQDLMGSKLRVEISRG 83
+ + G + VE+S G
Sbjct: 115 DSSTICGQRASVELSSG 131
>gi|93003218|tpd|FAA00192.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 238
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDS 65
M R T++YVG L+ + + DLE EFE +G+L +VWVA +PPGFA+VEF + DA+ A
Sbjct: 9 MARDTKIYVGNLSSSTTRGDLEYEFEYYGRLINVWVAKSPPGFAYVEFEDPRDADDAIKG 68
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGG 90
++ ++L G ++RVE S G R RG
Sbjct: 69 LDGKELHGRRIRVERSHGMPRNRGS 93
>gi|196009125|ref|XP_002114428.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583447|gb|EDV23518.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 247
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 53/74 (71%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
TRVY+G L K ++E EF ++G L VW+A NPPGFAFV F + +DA+ A ++++ +
Sbjct: 5 TRVYIGNLGSGAAKHEIEKEFARYGPLKDVWIARNPPGFAFVVFDDPLDAQDAVEALDGR 64
Query: 70 DLMGSKLRVEISRG 83
L G+++RVEI+RG
Sbjct: 65 RLCGARVRVEIARG 78
>gi|72160170|ref|XP_788983.1| PREDICTED: uncharacterized protein LOC584006 [Strongylocentrotus
purpuratus]
Length = 300
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 49/75 (65%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
R+YVG L + K+D+E EF K+G L +W+A NPPGFAFVEF AEAA +N +
Sbjct: 9 RLYVGSLNHSTTKDDVEREFGKYGHLVDIWMARNPPGFAFVEFETAGQAEAALKELNGRT 68
Query: 71 LMGSKLRVEISRGRG 85
+G+++ VE SR +
Sbjct: 69 FLGNRIMVEPSRAQN 83
>gi|326431779|gb|EGD77349.1| Rsf1 [Salpingoeca sp. ATCC 50818]
Length = 89
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
RVYVGGL + K +LE EF KFG+L VWVA PPGFAF+EF N +DA A ++ +
Sbjct: 5 MRVYVGGLPDDADKRELEAEFSKFGRLQDVWVARKPPGFAFIEFENDMDARDAVRELDGR 64
Query: 70 DLMGSKLRVEIS 81
+L G+++RVEI+
Sbjct: 65 ELCGNRVRVEIA 76
>gi|321469412|gb|EFX80392.1| hypothetical protein DAPPUDRAFT_51367 [Daphnia pulex]
Length = 120
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 52/80 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L + DLE F K+G L +VWVA NPPGFAFVE+ + DAE A +M+
Sbjct: 11 CKVYVGNLGNNTARGDLEASFSKYGALKNVWVARNPPGFAFVEYEDPRDAEDAVRAMDGS 70
Query: 70 DLMGSKLRVEISRGRGRGRG 89
+ GS++RVE+S GR R R
Sbjct: 71 RICGSRVRVEMSSGRARERN 90
>gi|324526478|gb|ADY48681.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 158
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL ++LE F +FG++ VWVA PPGFAF+EF + DAE A +++
Sbjct: 10 CKVYVGGLPNDATSQELEDAFHRFGRIRKVWVARRPPGFAFIEFEDSRDAEDAVRALDGT 69
Query: 70 DLMGSKLRVEISRGRGRGRG---GGGRGGRFDS 99
+ G + RVE+S GR R GG RGGRF S
Sbjct: 70 RICGVRARVELSHGRRRNGAPDYGGSRGGRFSS 102
>gi|72167808|ref|XP_789661.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 2
[Strongylocentrotus purpuratus]
gi|390364611|ref|XP_003730646.1| PREDICTED: serine/arginine-rich splicing factor 7-like isoform 1
[Strongylocentrotus purpuratus]
Length = 190
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
ERG +VYVG L E+ K +LE EF +FG L SVW+A NP GFAFVE+ + DA A M
Sbjct: 29 ERGCKVYVGNLGESASKSELEKEFGRFGPLKSVWIARNPAGFAFVEYEDPRDASDAVKDM 88
Query: 67 NDQDLMGSKLRVEISRG 83
+ + G + RVE+S G
Sbjct: 89 DSSTICGQRARVELSSG 105
>gi|391347503|ref|XP_003748000.1| PREDICTED: uncharacterized protein LOC100899663, partial
[Metaseiulus occidentalis]
Length = 166
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+ R++VGG+ E+++KEDLE F K+G+L +VWVA NPPGFAFV+F + +A A M
Sbjct: 34 QNQNRIFVGGINESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQM 93
Query: 67 NDQDLMGSKLRV 78
+ Q+L G L+V
Sbjct: 94 DGQELNGMTLKV 105
>gi|427795611|gb|JAA63257.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 127
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L K ++E F KFG L +VWVA NPPGFAFVEF + DAE AC +++
Sbjct: 27 CKVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGS 86
Query: 70 DLMGSKLRVEISR 82
L G+++RVE+S
Sbjct: 87 RLCGTRVRVEMSH 99
>gi|442757015|gb|JAA70666.1| Putative alternative splicing factor srp20/9g8 rrm superfamily
[Ixodes ricinus]
Length = 141
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L K ++E F KFG L +VWVA NPPGFAFVEF + DAE AC +++
Sbjct: 7 CKVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 70 DLMGSKLRVEISR 82
L G+++RVE+S
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|72026975|ref|XP_787177.1| PREDICTED: serine/arginine-rich splicing factor 7-like
[Strongylocentrotus purpuratus]
Length = 192
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L + +LE F ++G++ +VWVA NPPGFAFV F ++ DA AC +++D+
Sbjct: 16 CKVYVGNLPSGASRTELEEAFSRYGRVKNVWVARNPPGFAFVMFEDERDASDACKALDDR 75
Query: 70 DLMGSKLRVEISRG 83
++ G ++RVE+S G
Sbjct: 76 NVCGVRVRVEMSSG 89
>gi|443725387|gb|ELU13010.1| hypothetical protein CAPTEDRAFT_155910 [Capitella teleta]
Length = 268
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 53/80 (66%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
T+VYVG L ++++LE F +G L SVWVA NPPGFAFVEF + DA+ + ++
Sbjct: 30 TKVYVGDLPRDAQEKELERAFSYYGPLKSVWVARNPPGFAFVEFEDPRDADDSVRGLDGS 89
Query: 70 DLMGSKLRVEISRGRGRGRG 89
L G+++RVE+S G+ R +
Sbjct: 90 SLCGTRVRVELSTGKVRPKP 109
>gi|346473189|gb|AEO36439.1| hypothetical protein [Amblyomma maculatum]
Length = 141
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L K ++E F KFG L +VWVA NPPGFAFVEF + DAE AC +++
Sbjct: 7 CKVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 70 DLMGSKLRVEISR 82
L G+++RVE+S
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|346473483|gb|AEO36586.1| hypothetical protein [Amblyomma maculatum]
Length = 131
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L K ++E F KFG L +VWVA NPPGFAFVEF + DAE AC +++
Sbjct: 7 CKVYVGNLGSGAAKHEIEAAFTKFGPLRNVWVARNPPGFAFVEFEDSRDAEDACRALDGS 66
Query: 70 DLMGSKLRVEISR 82
L G+++RVE+S
Sbjct: 67 RLCGTRVRVEMSH 79
>gi|391348700|ref|XP_003748582.1| PREDICTED: uncharacterized protein LOC100904155 [Metaseiulus
occidentalis]
Length = 531
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
R++VGG++E+++KEDLE F K+G+L +VWVA NPPGFAFV+F + +A A M+ Q+
Sbjct: 47 RIFVGGISESIQKEDLESVFSKYGRLTNVWVAQNPPGFAFVDFDDNQNASDAVAQMDGQE 106
Query: 71 LMGSKLRV 78
L G L+V
Sbjct: 107 LNGMTLKV 114
>gi|226472060|emb|CAX77068.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472062|emb|CAX77069.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472064|emb|CAX77070.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472066|emb|CAX77071.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472072|emb|CAX77074.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 155
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GT+VY+G L + +LE F ++G+L +VWVA NPPGFAFVEF + DA A ++
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 69 QDLMGSKLRVEISRGRGRGR 88
+ G + RVE+S G+ R +
Sbjct: 69 TVMCGVRARVELSTGKSRQK 88
>gi|29841408|gb|AAP06440.1| similar to NM_006276 splicing factor, arginine/serine-rich 7
[Schistosoma japonicum]
gi|226472076|emb|CAX77076.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472078|emb|CAX77077.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472080|emb|CAX77078.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472082|emb|CAX77079.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
gi|226472084|emb|CAX77080.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 169
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GT+VY+G L + +LE F ++G+L +VWVA NPPGFAFVEF + DA A ++
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 69 QDLMGSKLRVEISRGRGRGR 88
+ G + RVE+S G+ R +
Sbjct: 69 TVMCGVRARVELSTGKSRQK 88
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GT+V+VG L T ++ DL EF KFG+LN VWVA NPPGFAFV F++ DA A ++
Sbjct: 6 GTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPGFAFVWFADDRDAGDAVREIDG 65
Query: 69 QDLMGSKLRVEIS 81
+ + G + RVE+S
Sbjct: 66 KSIAGREWRVEVS 78
>gi|256089259|ref|XP_002580730.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646106|emb|CCD59208.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 171
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GT+VY+G L + +LE F ++G+L +VWVA NPPGFAFVEF + DA A ++
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 69 QDLMGSKLRVEISRGRGRGR 88
+ G + RVE+S G+ R +
Sbjct: 69 TVMCGVRARVELSTGKSRQK 88
>gi|256089261|ref|XP_002580731.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|350646105|emb|CCD59207.1| arginine/serine-rich splicing factor, putative [Schistosoma
mansoni]
Length = 157
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 51/80 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GT+VY+G L + +LE F ++G+L +VWVA NPPGFAFVEF + DA A ++
Sbjct: 9 GTKVYIGDLPREASERELERIFREYGRLRNVWVARNPPGFAFVEFEDAADASDAVRELDG 68
Query: 69 QDLMGSKLRVEISRGRGRGR 88
+ G + RVE+S G+ R +
Sbjct: 69 TVMCGVRARVELSTGKSRQK 88
>gi|391333364|ref|XP_003741086.1| PREDICTED: serine/arginine-rich splicing factor 3-like
[Metaseiulus occidentalis]
Length = 162
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS E +VY+G L + D+E F K+G L +VWVA NPPGFAFVEF + DAE
Sbjct: 1 MSKRDWELTCKVYIGNLATHASRHDVESVFSKYGNLRNVWVARNPPGFAFVEFEDSRDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISRGR 84
A +++ + GS+++ E+S G+
Sbjct: 61 DAVRAVDGSRICGSRVKCEMSHGK 84
>gi|340368163|ref|XP_003382622.1| PREDICTED: hypothetical protein LOC100636732 [Amphimedon
queenslandica]
Length = 172
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
T+VYVG L E K LE EFE+FG L SVWVA NPPGFAFVEF + DAE A ++
Sbjct: 2 STKVYVGELGENGDKGVLEREFERFGTLKSVWVARNPPGFAFVEFEDPRDAEEAIRELDG 61
Query: 69 QDLMGSKLRVE 79
+ + ++++VE
Sbjct: 62 KMICNARIKVE 72
>gi|449672680|ref|XP_004207768.1| PREDICTED: uncharacterized protein LOC100212585 isoform 2 [Hydra
magnipapillata]
Length = 179
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+R+++GGL E + +LE EFE G++ +WVA NPPGF F+ F + DA+ A M+ +
Sbjct: 2 SRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDGK 61
Query: 70 DLMGSKLRVEISRG 83
+ GSK+RVE +RG
Sbjct: 62 RVCGSKVRVEKARG 75
>gi|221112060|ref|XP_002166312.1| PREDICTED: uncharacterized protein LOC100212585 isoform 1 [Hydra
magnipapillata]
Length = 218
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+R+++GGL E + +LE EFE G++ +WVA NPPGF F+ F + DA+ A M+ +
Sbjct: 2 SRIFIGGLPEDATRTELEREFEHIGRMRDIWVARNPPGFGFIIFEDPRDADDAVREMDGK 61
Query: 70 DLMGSKLRVEISRG 83
+ GSK+RVE +RG
Sbjct: 62 RVCGSKVRVEKARG 75
>gi|221219336|gb|ACM08329.1| Splicing factor, arginine/serine-rich 7 [Salmo salar]
Length = 266
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 56/110 (50%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L K +LE F +G L SVWVA NPPGFAFVE+ + DAE A M+ +
Sbjct: 15 CKVYVGDLGNGAAKGELERAFNYYGPLRSVWVARNPPGFAFVEYEDPRDAEDATKGMDGK 74
Query: 70 DLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYR 119
L G+++RVE+S G R R R G G Y YR
Sbjct: 75 VLCGARIRVELSTGMSRKSRHDRPSRRHFDPNDRCYQCGENGHYAYDCYR 124
>gi|390176510|ref|XP_003736158.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
gi|388858711|gb|EIM52231.1| GA30013 [Drosophila pseudoobscura pseudoobscura]
Length = 259
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVG L +K DLE F +G L SVW+A NPPGFAFVEF + DA A ++ +
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 71 LMGSKLRVEISRGR 84
+ G + RVE+S G+
Sbjct: 69 VCGRRARVELSTGK 82
>gi|391331353|ref|XP_003740112.1| PREDICTED: uncharacterized protein LOC100903643 [Metaseiulus
occidentalis]
Length = 162
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS+ E +VY+G L + D+E F K+G L +VWVA NPPGFAFVEF + DAE
Sbjct: 1 MSNRDWELTCKVYIGNLANHTSRHDIESAFGKYGNLRNVWVARNPPGFAFVEFEDSRDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISR 82
A +++ + GS+++ E+S
Sbjct: 61 DAVRALDGSRICGSRVKCEMSH 82
>gi|167536851|ref|XP_001750096.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771425|gb|EDQ85092.1| predicted protein [Monosiga brevicollis MX1]
Length = 136
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+V+VG L + ++K DLE EF +FG+L VWVA PPGFAFV+F +Q DAE A +N +
Sbjct: 47 QVFVGNLPDDIEKMDLENEFRQFGRLLDVWVARKPPGFAFVKFEDQRDAEDAVQGLNRRT 106
Query: 71 LMGSKLRVEISR 82
G ++RVEIS
Sbjct: 107 AFGREIRVEISH 118
>gi|24582360|ref|NP_723226.1| x16, isoform A [Drosophila melanogaster]
gi|7243686|gb|AAF43414.1|AF232774_1 SR family splicing factor 9G8 [Drosophila melanogaster]
gi|6433840|emb|CAB60724.1| DXl6 protein [Drosophila melanogaster]
gi|7297188|gb|AAF52454.1| x16, isoform A [Drosophila melanogaster]
gi|20152051|gb|AAM11385.1| LD46359p [Drosophila melanogaster]
gi|220946366|gb|ACL85726.1| xl6-PA [synthetic construct]
gi|220956098|gb|ACL90592.1| xl6-PA [synthetic construct]
Length = 258
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVG L +K DLE F +G L SVW+A NPPGFAFVEF + DA A ++ +
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 71 LMGSKLRVEISRGR 84
+ G + RVE+S G+
Sbjct: 69 VCGRRARVELSTGK 82
>gi|442626458|ref|NP_001260168.1| x16, isoform B [Drosophila melanogaster]
gi|440213469|gb|AGB92704.1| x16, isoform B [Drosophila melanogaster]
Length = 257
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVG L +K DLE F +G L SVW+A NPPGFAFVEF + DA A ++ +
Sbjct: 9 KVYVGDLGNNARKNDLEYVFGAYGSLRSVWIARNPPGFAFVEFESARDAADAVRGLDGRT 68
Query: 71 LMGSKLRVEISRGR 84
+ G + RVE+S G+
Sbjct: 69 VCGRRARVELSTGK 82
>gi|291230089|ref|XP_002735000.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus
kowalevskii]
Length = 182
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L K ++E F +G L +VWVA NPPGFAFVEF + DA AC ++
Sbjct: 13 CKVYVGDLGTNGTKHEIERAFSYYGPLRNVWVARNPPGFAFVEFEDPRDASDACRGLDKT 72
Query: 70 DLMGSKLRVEISRGRGR 86
L G ++R E+S G+ R
Sbjct: 73 KLCGVEIRAELSSGKSR 89
>gi|170578222|ref|XP_001894321.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158599142|gb|EDP36833.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 200
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
R++V + E+V+ DLE F +FGKL+ VWVA PP FAFV F N+ DA A ++N+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNTY 106
Query: 71 LMGSKLRVEISRGRGRG 87
+ ++RV ++ R R
Sbjct: 107 IRNCRVRVSVALPRVRA 123
>gi|393909592|gb|EFO27939.2| hypothetical protein LOAG_00532 [Loa loa]
Length = 173
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
R++V + E+V+ DLE F +FGKL+ VWVA PP FAFV F N+ DA A ++N+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNTY 106
Query: 71 LMGSKLRVEISRGRGRGR 88
+ ++RV ++ R R
Sbjct: 107 IRNCRVRVSVALPRVRAH 124
>gi|195451607|ref|XP_002072997.1| GK13897 [Drosophila willistoni]
gi|194169082|gb|EDW83983.1| GK13897 [Drosophila willistoni]
Length = 140
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A +++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLKNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|312089498|ref|XP_003146269.1| hypothetical protein LOAG_10696 [Loa loa]
Length = 113
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL + ++LE F +FG++ VWVA PPGFAFVEF + DAE A +++
Sbjct: 10 CKVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 70 DLMGSKLRVEIS 81
+ G + RVEIS
Sbjct: 70 RICGVRARVEIS 81
>gi|321469591|gb|EFX80571.1| hypothetical protein DAPPUDRAFT_304081 [Daphnia pulex]
Length = 162
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L + ++E F K+G L +VWVA NPPGFAFVEF + DAE A +++
Sbjct: 12 CKVYVGNLGSNAARGEIEEAFSKYGTLRNVWVARNPPGFAFVEFEDPRDAEDAVRALDGV 71
Query: 70 DLMGSKLRVEISRGRGRGRG 89
L G++++VE+S G+ R G
Sbjct: 72 RLCGARVKVEMSTGKRRSNG 91
>gi|312066123|ref|XP_003136120.1| hypothetical protein LOAG_00532 [Loa loa]
Length = 201
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
R++V + E+V+ DLE F +FGKL+ VWVA PP FAFV F N+ DA A ++N+
Sbjct: 47 RLHVANIDESVRARDLEEAFSRFGKLSEVWVASYPPLFAFVVFKNKSDANEALAALNNTY 106
Query: 71 LMGSKLRVEISRGRGRGR 88
+ ++RV ++ R R
Sbjct: 107 IRNCRVRVSVALPRVRAH 124
>gi|225710028|gb|ACO10860.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 148
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS G ++VYVG L + K ++E F ++GK+ SVWVA NPPGFAFVEF ++ DAE
Sbjct: 1 MSRGNRNYNSKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEIS 81
A ++ + G + VE+S
Sbjct: 61 DAAKGLDGSRICGVRATVEMS 81
>gi|225708680|gb|ACO10186.1| RNA-binding protein 1 [Caligus rogercresseyi]
Length = 147
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS G ++VYVG L + K ++E F ++GK+ SVWVA NPPGFAFVEF ++ DAE
Sbjct: 1 MSRGNRNYNSKVYVGNLGDNASKHEIEDVFRRYGKVRSVWVARNPPGFAFVEFEDERDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEIS 81
A ++ + G + VE+S
Sbjct: 61 DAAKGLDGSRICGVRATVEMS 81
>gi|393904918|gb|EJD73831.1| hypothetical protein, variant [Loa loa]
Length = 145
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL + ++LE F +FG++ VWVA PPGFAFVEF + DAE A +++
Sbjct: 10 CKVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 70 DLMGSKLRVEIS 81
+ G + RVEIS
Sbjct: 70 RICGVRARVEIS 81
>gi|348688828|gb|EGZ28642.1| hypothetical protein PHYSODRAFT_353568 [Phytophthora sojae]
Length = 173
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GTRVYVGGL +++ F ++G ++++WVA NPPGFAFV+F + DA+ A SM+
Sbjct: 2 GTRVYVGGLPRDATSREIQDGFNRYGHVSNIWVARNPPGFAFVDFEDPRDADDAIRSMDG 61
Query: 69 QDLMGSKLRVEIS 81
+D +G ++RVE++
Sbjct: 62 RDFLGGRIRVELA 74
>gi|242247509|ref|NP_001156211.1| serine/arginine-rich splicing factor 3-like [Acyrthosiphon pisum]
gi|239790491|dbj|BAH71803.1| ACYPI006320 [Acyrthosiphon pisum]
Length = 152
Score = 69.7 bits (169), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
MS ++ +VY+G L + K ++E F K+G L + W+A NPPGFAFVEF + DAE
Sbjct: 1 MSHRDWDQSCKVYIGNLGQNGTKHEIEASFTKYGPLKNTWIARNPPGFAFVEFEDPRDAE 60
Query: 61 AACDSMNDQDLMGSKLRVEISRGR 84
A ++ + G ++RVE+S R
Sbjct: 61 DAVRGLDGTRICGVRVRVEMSSNR 84
>gi|170595883|ref|XP_001902557.1| Sr protein [Brugia malayi]
gi|158589706|gb|EDP28594.1| Sr protein, putative [Brugia malayi]
Length = 153
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL + ++LE F +FG++ VWVA PPGFAFVEF + DAE A +++
Sbjct: 19 CKVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGT 78
Query: 70 DLMGSKLRVEIS 81
+ G + RVEIS
Sbjct: 79 RICGVRARVEIS 90
>gi|307212780|gb|EFN88451.1| RNA-binding protein 1 [Harpegnathos saltator]
Length = 101
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F KFG L +VWVA NPPGFAFVEF + DAE A ++
Sbjct: 10 SCKVYVGNLGSSASKHEIESAFSKFGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRVRVEM 81
>gi|237843959|ref|XP_002371277.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
gi|211968941|gb|EEB04137.1| hypothetical protein TGME49_011420 [Toxoplasma gondii ME49]
Length = 171
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+ G +VY+GG+ E+LE F K+G +++VWVA NPPGFAF+ F + DA+ A +
Sbjct: 9 QEGRKVYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAEL 68
Query: 67 NDQDLMGSKLRVEISRGRG 85
+ G +RVEI+RG G
Sbjct: 69 DGYRYRGKPIRVEIARGPG 87
>gi|307187925|gb|EFN72838.1| RNA-binding protein 1 [Camponotus floridanus]
Length = 101
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E +F K+G L +VWVA NPPGFAFVEF + DAE A ++
Sbjct: 10 SCKVYVGNLGSSASKHEIEGKFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 69
Query: 69 QDLMGSKLRVEI 80
L G+++RVE+
Sbjct: 70 IHLCGTRVRVEM 81
>gi|221483766|gb|EEE22078.1| arginine/serine-rich splicing factor, putative [Toxoplasma gondii
GT1]
Length = 184
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSM 66
+ G +VY+GG+ E+LE F K+G +++VWVA NPPGFAF+ F + DA+ A +
Sbjct: 4 QEGRKVYIGGIEADTTTEELESIFGKYGTISTVWVARNPPGFAFLTFDDYRDAKDAVAEL 63
Query: 67 NDQDLMGSKLRVEISRGRG 85
+ G +RVEI+RG G
Sbjct: 64 DGYRYRGKPIRVEIARGPG 82
>gi|393904919|gb|EJD73832.1| hypothetical protein LOAG_18772 [Loa loa]
Length = 199
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL + ++LE F +FG++ VWVA PPGFAFVEF + DAE A +++
Sbjct: 11 KVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGTR 70
Query: 71 LMGSKLRVEIS 81
+ G + RVEIS
Sbjct: 71 ICGVRARVEIS 81
>gi|345486250|ref|XP_003425431.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
gi|345486252|ref|XP_003425432.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Nasonia
vitripennis]
Length = 163
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF + DAE A ++
Sbjct: 11 SCKVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 70
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 71 TRCCGTRVRVEM 82
>gi|158224|gb|AAA28850.1| RNA binding protein [Drosophila melanogaster]
Length = 135
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A +++
Sbjct: 10 ACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATAALDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|194767988|ref|XP_001966096.1| GF19500 [Drosophila ananassae]
gi|190622981|gb|EDV38505.1| GF19500 [Drosophila ananassae]
Length = 179
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|402591119|gb|EJW85049.1| hypothetical protein WUBG_04043 [Wuchereria bancrofti]
Length = 129
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 47/73 (64%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL + ++LE F +FG++ VWVA PPGFAFVEF + DAE A +++
Sbjct: 10 CKVYVGGLPQDATSQELEDAFNRFGRIRKVWVARRPPGFAFVEFEDARDAEDAVKALDGT 69
Query: 70 DLMGSKLRVEISR 82
+ G + RVEIS
Sbjct: 70 RICGVRARVEISH 82
>gi|195401867|ref|XP_002059532.1| GJ14774 [Drosophila virilis]
gi|194147239|gb|EDW62954.1| GJ14774 [Drosophila virilis]
Length = 155
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKHEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|322801941|gb|EFZ22488.1| hypothetical protein SINV_01609 [Solenopsis invicta]
Length = 289
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF + DAE A ++
Sbjct: 37 SCKVYVGNLGSSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 96
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 97 TRCCGTRVRVEM 108
>gi|118489183|gb|ABK96398.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 166
Score = 67.0 bits (162), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
+RVYVG L V + DLE EF +FG + SVWVA PPG+AF++F ++ DA+ A ++
Sbjct: 2 SRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELD 59
>gi|324512982|gb|ADY45358.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 142
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL + +++E F +FG++ VWVA PPGFAFVEF + DAE + +++
Sbjct: 10 CKVYVGGLPQDATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 70 DLMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 70 RICGVRARVELS 81
>gi|195168745|ref|XP_002025191.1| GL26725 [Drosophila persimilis]
gi|194108636|gb|EDW30679.1| GL26725 [Drosophila persimilis]
Length = 174
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|443714454|gb|ELU06855.1| hypothetical protein CAPTEDRAFT_164776 [Capitella teleta]
Length = 196
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
G RV+VG L K +LE EFE FG + VWVA NPPGFAFV + + DA+ A ++
Sbjct: 11 GHRVFVGELGSRAGKYELEKEFEYFGPIVDVWVARNPPGFAFVVYKHSADAKKAVKELDG 70
Query: 69 QDLMGSKLRVEISRG 83
+ + G ++RVE++R
Sbjct: 71 RMICGRRVRVELARP 85
>gi|449478559|ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like
[Cucumis sativus]
Length = 188
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
TRVY+G L V + DLE EF FG L SVWVA PPG+AF+EF ++ DA A +++
Sbjct: 2 TRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALD 59
>gi|383852334|ref|XP_003701683.1| PREDICTED: uncharacterized protein LOC100878663 [Megachile
rotundata]
Length = 263
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF + DAE A ++
Sbjct: 10 SCKVYVGNLGNSASKHEIETAFSKYGPLRNVWVARNPPGFAFVEFEDSRDAEDAVRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRVRVEM 81
>gi|341886966|gb|EGT42901.1| hypothetical protein CAEBREN_25648 [Caenorhabditis brenneri]
Length = 183
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL ++LE F++FG++ VWVA PPGFAFVE+ + DAE A +++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 71 LMGSKLRVEISRGR 84
+ G + RVE+S G+
Sbjct: 64 ICGVRARVELSTGQ 77
>gi|195438960|ref|XP_002067399.1| GK16401 [Drosophila willistoni]
gi|194163484|gb|EDW78385.1| GK16401 [Drosophila willistoni]
Length = 176
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|170054825|ref|XP_001863306.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874993|gb|EDS38376.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 246
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVG L K+++E F +G L +VWVA NPPGFAFVEF + DAE + ++ +
Sbjct: 9 KVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFEDARDAEDSVRGLDGRT 68
Query: 71 LMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 69 ICGRRARVELS 79
>gi|224143401|ref|XP_002324943.1| predicted protein [Populus trichocarpa]
gi|222866377|gb|EEF03508.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+RVYVG L V + +LE EF +FG + SVWVA PPG+AF++F ++ DA+ D++++
Sbjct: 2 SRVYVGNLDPRVSERELEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQ---DAIHEL 58
Query: 70 DLMGSKLRVEIS 81
D + RVE+S
Sbjct: 59 DAGKNGWRVELS 70
>gi|224121284|ref|XP_002330789.1| predicted protein [Populus trichocarpa]
gi|222872591|gb|EEF09722.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
+RVYVG L V + DLE EF +FG + SVWVA PPG+AF++F ++ DA+ A ++
Sbjct: 2 SRVYVGNLDPRVSERDLEDEFRRFGVIRSVWVARRPPGYAFIDFDDKRDAQDAIHELD 59
>gi|403182431|gb|EJY57381.1| AAEL017082-PA [Aedes aegypti]
Length = 243
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVG L K+++E F +G L +VWVA NPPGFAFVEF + DAE + ++ +
Sbjct: 13 KVYVGELGNNASKQEIEDAFSYYGPLRNVWVARNPPGFAFVEFDDARDAEDSVRGLDGRT 72
Query: 71 LMGSKLRVEIS 81
+ G ++RVE+S
Sbjct: 73 VCGRRVRVELS 83
>gi|158296825|ref|XP_317163.4| AGAP008303-PA [Anopheles gambiae str. PEST]
gi|157014898|gb|EAA12231.4| AGAP008303-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L K+D+E F +G L +VWVA NPPGFAFVEF + DAE A ++ +
Sbjct: 8 AKVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDAVRGLDGR 67
Query: 70 DLMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 68 TISGRRARVELS 79
>gi|24645769|ref|NP_731510.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|194902212|ref|XP_001980643.1| GG17683 [Drosophila erecta]
gi|195330033|ref|XP_002031713.1| GM23896 [Drosophila sechellia]
gi|195571925|ref|XP_002103951.1| GD18708 [Drosophila simulans]
gi|55584177|sp|Q02427.3|RBP1_DROME RecName: Full=RNA-binding protein 1
gi|17861840|gb|AAL39397.1| GM02602p [Drosophila melanogaster]
gi|23170942|gb|AAN13487.1| RNA-binding protein 1, isoform D [Drosophila melanogaster]
gi|190652346|gb|EDV49601.1| GG17683 [Drosophila erecta]
gi|194120656|gb|EDW42699.1| GM23896 [Drosophila sechellia]
gi|194199878|gb|EDX13454.1| GD18708 [Drosophila simulans]
gi|220943202|gb|ACL84144.1| Rbp1-PB [synthetic construct]
gi|220953396|gb|ACL89241.1| Rbp1-PB [synthetic construct]
Length = 144
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A +++
Sbjct: 10 ACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|24641772|ref|NP_572880.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|21064531|gb|AAM29495.1| RE47308p [Drosophila melanogaster]
gi|22832194|gb|AAF48264.2| Rbp1-like, isoform A [Drosophila melanogaster]
gi|220948574|gb|ACL86830.1| Rbp1-like-PA [synthetic construct]
gi|220957848|gb|ACL91467.1| Rbp1-like-PA [synthetic construct]
Length = 158
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|198471193|ref|XP_001355529.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
gi|198145808|gb|EAL32588.2| GA15173 [Drosophila pseudoobscura pseudoobscura]
Length = 161
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|195478268|ref|XP_002100463.1| GE16161 [Drosophila yakuba]
gi|194187987|gb|EDX01571.1| GE16161 [Drosophila yakuba]
Length = 160
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|195129938|ref|XP_002009411.1| GI15337 [Drosophila mojavensis]
gi|193907861|gb|EDW06728.1| GI15337 [Drosophila mojavensis]
Length = 151
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|195045313|ref|XP_001991952.1| GH24472 [Drosophila grimshawi]
gi|193892793|gb|EDV91659.1| GH24472 [Drosophila grimshawi]
Length = 163
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|194895540|ref|XP_001978277.1| GG19507 [Drosophila erecta]
gi|190649926|gb|EDV47204.1| GG19507 [Drosophila erecta]
Length = 159
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|289740745|gb|ADD19120.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 145
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFDDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|380023824|ref|XP_003695711.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Apis
florea]
Length = 166
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF + DAE A ++
Sbjct: 14 SCKVYVGNLGNSASKHEIESAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDAVRGLDG 73
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 74 TRCCGTRVRVEM 85
>gi|324513594|gb|ADY45580.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 144
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAA 62
D ++E +V+VGGL ++LE F ++G + VW+A PPGFAF+EF + DA+ A
Sbjct: 5 DEILE--CKVFVGGLPHDATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDA 62
Query: 63 CDSMNDQDLMGSKLRVEIS 81
++N + G + RVEIS
Sbjct: 63 VKALNGARICGVRPRVEIS 81
>gi|194742457|ref|XP_001953719.1| GF17902 [Drosophila ananassae]
gi|190626756|gb|EDV42280.1| GF17902 [Drosophila ananassae]
Length = 163
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A +++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|440633939|gb|ELR03858.1| hypothetical protein GMDG_01387 [Geomyces destructans 20631-21]
Length = 898
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 101/230 (43%), Gaps = 34/230 (14%)
Query: 1 MSDGMMER---GTRVYVGGL-TETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQ 56
+S+G+ +R G+R+++G L TE V K D+ F KFG+L V + + FV+F +
Sbjct: 409 VSEGLWDRFPAGSRLFIGNLPTEKVTKRDIFYIFHKFGRLAQVSIKQ---AYGFVQFHDV 465
Query: 57 IDAEAACDSMNDQDLMGSKLRVEISRGRGRGR-GGGGRGGRFDSRGGRGGYR----GGGG 111
AA Q++ G K+ +EIS+ + R G G+ R R GGG
Sbjct: 466 KACHAALQREQGQEIRGRKMHLEISKPQKNTRQAGPGQAQPATQRRSRSPEHQRGGGGGR 525
Query: 112 GYGGGGYRDGGDRFGG------------GGRGRGDGGFRGSRGGGGYRG---GRDEYGGG 156
G G G DR+ G G RG +R R RG GRDEYG
Sbjct: 526 GGQGRNQPQGYDRYDGRALTSPREGDHRGATTRGREHYRALRSPSPQRGGFRGRDEYGQN 585
Query: 157 RGGGGYRGGRDSRGFDGGKPDYYNGGGGGRGGGGRFRSRSPVQRRYNVDE 206
RG Y GG D R P Y R GGR+R RS RR +DE
Sbjct: 586 RGRDSY-GGHDGRHTRSRSPVY------DRRDGGRYRERSLSPRRRQMDE 628
>gi|312371045|gb|EFR19313.1| hypothetical protein AND_22699 [Anopheles darlingi]
Length = 225
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVG L K+D+E F +G L +VWVA NPPGFAFVEF + DAE A ++ +
Sbjct: 9 KVYVGELGNNASKQDIEEAFGYYGPLRNVWVARNPPGFAFVEFEDARDAEDAVRGLDGRT 68
Query: 71 LMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 69 ISGRRARVELS 79
>gi|116787469|gb|ABK24519.1| unknown [Picea sitchensis]
Length = 169
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+RVYVG L V + +LE EF +G L SVWVA PPGFAF+EF ++ DA A ++N +
Sbjct: 2 SRVYVGNLDPRVTERELEDEFRVYGVLRSVWVARKPPGFAFIEFEDRRDAGDAVRALNGK 61
Query: 70 DLMGSKLRVEISRG 83
+ RVE+SR
Sbjct: 62 N----DWRVELSRN 71
>gi|341903887|gb|EGT59822.1| CBN-RSP-6 protein [Caenorhabditis brenneri]
Length = 248
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL ++LE F++FG++ VWVA PPGFAFVE+ + DAE A +++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 71 LMGSKLRVEISRGR 84
+ G + RVE+S G+
Sbjct: 64 ICGVRARVELSTGQ 77
>gi|268552699|ref|XP_002634332.1| C. briggsae CBR-RSP-6 protein [Caenorhabditis briggsae]
Length = 157
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL ++LE F++FG++ VWVA PPGFAFVE+ + DAE A +++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 71 LMGSKLRVEISRGR 84
+ G + RVE+S G+
Sbjct: 64 ICGVRARVELSTGQ 77
>gi|242014601|ref|XP_002427975.1| RNA-binding protein, putative [Pediculus humanus corporis]
gi|212512474|gb|EEB15237.1| RNA-binding protein, putative [Pediculus humanus corporis]
Length = 106
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L K ++E F K+G L +VWVA NPPGFAFVEF + DAE + ++
Sbjct: 10 SCKVYVGNLGSNASKHEIEAAFSKYGPLRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|25144919|ref|NP_741446.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
gi|56749458|sp|Q18409.1|RSP6_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 6;
AltName: Full=CeSRp20; AltName: Full=RNA-binding
protein srp-1
gi|351058799|emb|CCD66574.1| Protein RSP-6, isoform a [Caenorhabditis elegans]
Length = 179
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL ++LE F++FG++ VWVA PPGFAFVE+ + DAE A +++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 71 LMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 64 ICGVRARVELS 74
>gi|320542033|ref|NP_001188585.1| Rbp1-like, isoform B [Drosophila melanogaster]
gi|318069370|gb|ADV37667.1| Rbp1-like, isoform B [Drosophila melanogaster]
Length = 247
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A ++
Sbjct: 10 ACKVYVGNLGSSASKYEIENAFSKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRGLDG 69
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 70 TRCCGTRIRVEM 81
>gi|357436747|ref|XP_003588649.1| RNA-binding protein Rsf1 [Medicago truncatula]
gi|355477697|gb|AES58900.1| RNA-binding protein Rsf1 [Medicago truncatula]
Length = 190
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+RVYVG L V + DLE EF FG + SVWVA PPG+AF++F ++ DA+ A +
Sbjct: 2 SRVYVGNLDSRVSERDLEDEFRVFGVIRSVWVARRPPGYAFIDFDDRRDAQDAI-----R 56
Query: 70 DLMGSK-LRVEIS 81
DL G RVE+S
Sbjct: 57 DLDGKNGWRVELS 69
>gi|302760851|ref|XP_002963848.1| hypothetical protein SELMODRAFT_68846 [Selaginella
moellendorffii]
gi|300169116|gb|EFJ35719.1| hypothetical protein SELMODRAFT_68846 [Selaginella
moellendorffii]
Length = 181
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 37/58 (63%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
RVYVG L + +LE EF FG L SVWVA PPGFAF+EF + DA+ A +MN
Sbjct: 2 ARVYVGNLDPRSTERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNMN 59
>gi|324509930|gb|ADY44158.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 136
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAA 62
D ++E +V+VGGL ++LE F ++G + VW+A PPGFAF+EF + DA+ A
Sbjct: 10 DEILE--CKVFVGGLPHDATTQELEEAFGRYGPIRKVWMARRPPGFAFIEFEDSRDADDA 67
Query: 63 CDSMNDQDLMGSKLRVEIS 81
++N + G + RVEIS
Sbjct: 68 VKALNGARICGVRPRVEIS 86
>gi|288806618|gb|ADC54214.1| RE57382p [Drosophila melanogaster]
Length = 178
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
+VYVG L + K ++E F K+G L +VWVA NPPGFAFVEF ++ DAE A +++
Sbjct: 53 ACKVYVGNLGSSASKHEIEGAFAKYGPLRNVWVARNPPGFAFVEFEDRRDAEDATRALDG 112
Query: 69 QDLMGSKLRVEI 80
G+++RVE+
Sbjct: 113 TRCCGTRIRVEM 124
>gi|324506217|gb|ADY42661.1| Splicing factor, arginine/serine-rich 6 [Ascaris suum]
Length = 163
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL + +++E F +FG++ VWVA PPGFAFVEF + DAE + +++
Sbjct: 10 CKVYVGGLPQDATSQEIEDAFNRFGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 70 DLMGSKLRVEISR 82
+ G + RVE+S
Sbjct: 70 RICGVRARVELSH 82
>gi|255587593|ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 184
Score = 63.2 bits (152), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
RVYVG L V + DLE EF +G L SVWVA PPG+AFVEF ++ DA A +++
Sbjct: 2 ARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALD 59
>gi|324532579|gb|ADY49247.1| Splicing factor, arginine/serine-rich 6, partial [Ascaris suum]
Length = 156
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVGGL + +++E F ++G++ VWVA PPGFAFVEF + DAE + +++
Sbjct: 10 CKVYVGGLPQDATSQEVEDAFSRYGRIRKVWVARRPPGFAFVEFEDSRDAEDSVKALDGT 69
Query: 70 DLMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 70 RICGVRARVELS 81
>gi|25144924|ref|NP_741448.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
gi|351058801|emb|CCD66576.1| Protein RSP-6, isoform c [Caenorhabditis elegans]
Length = 118
Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL ++LE F++FG++ VWVA PPGFAFVE+ + DAE A +++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 71 LMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 64 ICGVRARVELS 74
>gi|308493016|ref|XP_003108698.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
gi|308248438|gb|EFO92390.1| hypothetical protein CRE_10826 [Caenorhabditis remanei]
Length = 277
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL ++LE F++FG++ VWVA PPGFAFVE+ + DAE A +++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 71 LMGSKLRVEISRGR 84
+ G + RVE+S G+
Sbjct: 64 ICGVRARVELSTGQ 77
>gi|298706217|emb|CBJ29258.1| RNA-binding protein 1 [Ectocarpus siliculosus]
Length = 402
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 5 MMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACD 64
M E +++G L V DLE + K+G + ++WVA NPPGFAF +F N+ A+
Sbjct: 1 MGEEPGHIHIGNLHPRVSVADLEPKLIKYGTITNLWVAKNPPGFAFCDFQNRAMADDCVR 60
Query: 65 SMNDQDLMGSKLRVEISR 82
M+ L + VEI+R
Sbjct: 61 GMDGLKLENLAITVEIAR 78
>gi|302780048|ref|XP_002971799.1| hypothetical protein SELMODRAFT_172361 [Selaginella
moellendorffii]
gi|300160931|gb|EFJ27548.1| hypothetical protein SELMODRAFT_172361 [Selaginella
moellendorffii]
Length = 229
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 37/58 (63%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
RVYVG L + +LE EF FG L SVWVA PPGFAF+EF + DA+ A +MN
Sbjct: 2 ARVYVGNLDPRSTERELEDEFRSFGVLRSVWVARKPPGFAFIEFDDYRDAQDAIQNMN 59
>gi|25144922|ref|NP_741447.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
gi|351058800|emb|CCD66575.1| Protein RSP-6, isoform b [Caenorhabditis elegans]
Length = 153
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
+VYVGGL ++LE F++FG++ VWVA PPGFAFVE+ + DAE A +++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 71 LMGSKLRVEIS 81
+ G + RVE+S
Sbjct: 64 ICGVRARVELS 74
>gi|307106194|gb|EFN54441.1| hypothetical protein CHLNCDRAFT_135849 [Chlorella variabilis]
Length = 242
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEF 53
GTRV+ GGL + ++++DLE EF K+GK+ +VW+A NPPGF FV
Sbjct: 5 GTRVFCGGLDDRIQQQDLEAEFGKYGKVEAVWIARNPPGFGFVTM 49
>gi|291241385|ref|XP_002740592.1| PREDICTED: RSZp22 protein, putative-like [Saccoglossus
kowalevskii]
Length = 179
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
+VYVG L + +LE F +G L +VWV+ NPPGFAF+EF + DA A ++ +
Sbjct: 11 CKVYVGELGTNGTRHELEKAFSYYGPLRNVWVSRNPPGFAFIEFEDARDASDAIRGLDKR 70
Query: 70 DLMGSKLRVEISRGRG 85
+ G ++RVE+S G+
Sbjct: 71 RVCGVEVRVELSSGKS 86
>gi|357466537|ref|XP_003603553.1| Splicing factor arginine/serine-rich [Medicago truncatula]
gi|355492601|gb|AES73804.1| Splicing factor arginine/serine-rich [Medicago truncatula]
Length = 199
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
TRVY+G L + + DLE +F FG + SVWVA PPG+AF++F ++ DA A ++
Sbjct: 2 TRVYIGNLDSRISERDLEDDFHVFGVIRSVWVARRPPGYAFIDFDDRRDALDAIRELD 59
>gi|47028307|gb|AAT09086.1| splicing factor [Bigelowiella natans]
Length = 194
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
GT+VYVG L + K DLE F GK+ + W+A NPPGF FV F + DA+ A ++
Sbjct: 10 GTKVYVGNLDRSTDKRDLEDFFRDSGKIVATWIARNPPGFGFVTFEDPYDAKDAIKDLDG 69
Query: 69 QDLMGSKLRVEI 80
++L G ++ V++
Sbjct: 70 RELRGKRVSVQL 81
>gi|449437054|ref|XP_004136307.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like
[Cucumis sativus]
gi|449515555|ref|XP_004164814.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like
[Cucumis sativus]
Length = 192
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
+RVYVG L V + +LE EF FG + SVWVA PPG+AF++F + DA A ++
Sbjct: 2 SRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELD 59
>gi|15236000|ref|NP_194886.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|145334187|ref|NP_001078474.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|75318746|sp|O81126.1|RZP22_ARATH RecName: Full=Serine/arginine-rich splicing factor RSZ22;
AltName: Full=RS-containing zinc finger protein 22;
Short=At-RSZ22; Short=At-RSZp22
gi|3281869|emb|CAA19765.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|3435094|gb|AAD12769.1| 9G8-like SR protein [Arabidopsis thaliana]
gi|7270061|emb|CAB79876.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|17529204|gb|AAL38828.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21436285|gb|AAM51281.1| putative RSZp22 splicing factor [Arabidopsis thaliana]
gi|21554419|gb|AAM63524.1| RSZp22 splicing factor [Arabidopsis thaliana]
gi|332660531|gb|AEE85931.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
gi|332660532|gb|AEE85932.1| protein serine/arginine-rich 22 [Arabidopsis thaliana]
Length = 200
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
+RVYVG L V + +LE EF FG + SVWVA PPG+AF++F + DA A +++
Sbjct: 2 SRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALD 59
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAF--NPPGFAFVEFSNQIDAEAACDSM 66
GTRV+VG L V++ ++E F K+G++ SV + PP FAFVEF ++ DA A
Sbjct: 3 GTRVFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGR 62
Query: 67 NDQDLMGSKLRVEISRGR 84
+ + G +LRVE+S GR
Sbjct: 63 DGIEFQGQRLRVEVSHGR 80
>gi|393910312|gb|EJD75816.1| hypothetical protein LOAG_17122 [Loa loa]
Length = 190
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAA 62
D E+ R+++ E+++K+DL+ F KFG +++VW+A PP FAFV F + DA A
Sbjct: 39 DHAAEQLGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADA 98
Query: 63 CDSMNDQDLMGSKLRVEISRGRGRGRGGGGRG 94
MN+ + +K++V + R G RG
Sbjct: 99 LKEMNNAYIGRNKIKVATAHP---PRKPGERG 127
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R ++G L+ + E L+ F KFG + V + GFAFV F + D EAA +
Sbjct: 8 RCFIGNLSWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGY-RGGGGGYGGGGYRDGGDR 124
MN DL G + V+ ++ +G GR G RG R R GGG G GGD
Sbjct: 68 MNGLDLDGRAITVDKAQPQGAGRDRNGDRDYDRDRGSRNDRGRDSGGGRAPRGSGGGGDC 127
Query: 125 FGGGGRGR-------GDGGFRGSRGGGGYRGGRDEYGGGR 157
F G G GDGG RG R Y G D YGGGR
Sbjct: 128 FKCGKPGHFARECPDGDGG-RGDR----YSGRDDRYGGGR 162
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN--PPGFAFVEFSNQIDAEAACDSMN 67
+R+Y+G L +K++DLE F K+GK+ + + PP F FV F + DA+ A + +
Sbjct: 54 SRLYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGFVTFEDSRDADEAVRARD 113
Query: 68 DQDLMGSKLRVEISRGR 84
D G +LRVE+SRG+
Sbjct: 114 GYDFDGYRLRVEMSRGK 130
>gi|312073828|ref|XP_003139695.1| hypothetical protein LOAG_04110 [Loa loa]
Length = 300
Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAA 62
D E+ R+++ E+++K+DL+ F KFG +++VW+A PP FAFV F + DA A
Sbjct: 149 DHAAEQLGRLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAADA 208
Query: 63 CDSMNDQDLMGSKLRV 78
MN+ + +K++V
Sbjct: 209 LKEMNNAYIGRNKIKV 224
>gi|170584455|ref|XP_001897015.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158595605|gb|EDP34147.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 304
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
R+++ E+++K+DL+ F KFG +++VW+A PP FAFV F + DA A MN+
Sbjct: 151 RLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNNAY 210
Query: 71 LMGSKLRV 78
+ +K++V
Sbjct: 211 IGRNKIKV 218
>gi|294893816|ref|XP_002774661.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239880054|gb|EER06477.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 147
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAAC 63
M +VYVG L E ++E+LE F+++G + SVWVA NPPGFAFV F + DA+ AC
Sbjct: 1 MTEERKVYVGNLEEGTREEELEKVFKRYGGIESVWVARNPPGFAFVTFEDARDADDAC 58
>gi|387018172|gb|AFJ51204.1| Cold-inducible RNA-binding protein-like [Crotalus adamanteus]
Length = 172
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDGGDRF 125
MN + + G ++RV+ + G+ R SRG RGG GG G R G F
Sbjct: 67 MNGKSVDGRQIRVDQA-----GKSSDNR-----SRGYRGG--SAGGRGFFRGGRGRGRGF 114
Query: 126 GGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGGY 162
G RG GG R GGY G RD YG R G Y
Sbjct: 115 SRGTGDRGYGGSRFESRSGGYSGSRDYYGSSRSQGSY 151
>gi|402590530|gb|EJW84460.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 298
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
R+++ E+++K+DL+ F KFG +++VW+A PP FAFV F + DA A MN+
Sbjct: 155 RLHICNFDESLRKDDLKDAFGKFGDIDNVWLASYPPLFAFVTFKAKEDAVDALKEMNN 212
>gi|123455020|ref|XP_001315258.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897929|gb|EAY03035.1| hypothetical protein TVAG_143350 [Trichomonas vaginalis G3]
Length = 156
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACDSMN 67
VYVG L+ + ++ L+ FEK+G + SV + N GF FVEF N+ DA+ AC+ M+
Sbjct: 28 VYVGSLSWSTNEDGLKAVFEKYGNITSVRIPRNDRDQSKGFGFVEFENEEDAKKACE-MD 86
Query: 68 DQDLMGSKLRVEISRGRGR 86
+L G L+V IS+ +
Sbjct: 87 GTELEGRALKVNISQPKSE 105
>gi|261205092|ref|XP_002627283.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
gi|239592342|gb|EEQ74923.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis
SLH14081]
Length = 143
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
++++VGGL E L + FEK+G + V + GF FV F++ +A+ A +
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 65 SMNDQDLMGSKLRVEISRGRGRGRGGG----GRGGRFD 98
+MN+Q+ G +RV+ + R R G G+ RFD
Sbjct: 62 AMNNQEFDGRVIRVDKASDRSTQRNDGFHGRGQYNRFD 99
>gi|302847745|ref|XP_002955406.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
gi|300259248|gb|EFJ43477.1| hypothetical protein VOLCADRAFT_45192 [Volvox carteri f.
nagariensis]
Length = 245
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAF--NPPGFAFVEFSNQIDAEAACDSMNDQ 69
V+VG L V++ ++E F K+G++ SV + PP FAFVEF +Q DA A +
Sbjct: 1 VFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDQRDAYDAVRGRDGI 60
Query: 70 DLMGSKLRVEIS 81
+ G +LRVEIS
Sbjct: 61 EFQGQRLRVEIS 72
>gi|47220951|emb|CAG03484.1| unnamed protein product [Tetraodon nigroviridis]
Length = 603
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L + +E L+ FEK + P GFAFVEF DA A +S+N+ D+
Sbjct: 387 LVVNNLAFSATEEVLQSTFEKATSIRIPQRDGRPKGFAFVEFETVKDATDALESLNNTDI 446
Query: 72 MGSKLRVEISRGRGRGRGGGGRGG 95
G +R+E S+ GRG GG G G
Sbjct: 447 EGRSIRLEFSQNSGRGEGGRGNSG 470
>gi|291225111|ref|XP_002732544.1| PREDICTED: RNA binding motif protein, Y-linked, family 1, member
A1-like [Saccoglossus kowalevskii]
Length = 479
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 1 MSDG--MMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEF 53
M+D + + T+VY+ GL+ + LELE KFG++ V + + GFAFV +
Sbjct: 1 MADQSDVKDEPTKVYLAGLSADTDETALELEMSKFGQVADVLLIKDKTTGRSRGFAFVTY 60
Query: 54 SNQIDAEAACDSMNDQDLMGSKLRVEISR 82
DA A +N ++ MG ++V+ ++
Sbjct: 61 ETSSDAALAVTGLNGKEFMGKVIKVDHAK 89
>gi|239611503|gb|EEQ88490.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327348484|gb|EGE77341.1| glycine-rich RNA-binding protein [Ajellomyces dermatitidis ATCC
18188]
Length = 143
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
++++VGGL E L + FEK+G + V + GF FV F++ +A+ A +
Sbjct: 2 SKLFVGGLAWHTTDETLRVGFEKYGTIEEATVVKDRDTNRSRGFGFVRFASDTEADTAMN 61
Query: 65 SMNDQDLMGSKLRVEISRGRGRGRGGGGRG 94
+MN+Q+ G +RV+ + R R G G
Sbjct: 62 AMNNQEFDGRVIRVDKASDRSTQRNDGFHG 91
>gi|378733184|gb|EHY59643.1| hypothetical protein HMPREF1120_07628 [Exophiala dermatitidis
NIH/UT8656]
Length = 296
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
+G + GT ++V G+ + + D+ FEK+G++ S + +P GF FV+
Sbjct: 61 EGAVNTGTNLFVTGIHPRLTEADVTRLFEKYGEVESCSIMLDPHTKESRGFGFVKMVTPE 120
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGG 117
AEAA + + + + G L +E +R R R G++ RG +RG GG
Sbjct: 121 QAEAAREGLQGEVIEGRTLSIEKAR---RARPRTPTPGKYFGPPKRGDFRGP----PRGG 173
Query: 118 YRD 120
YRD
Sbjct: 174 YRD 176
>gi|121583148|ref|YP_973589.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596410|gb|ABM39847.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 148
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L TV+ EDL+ F +FG + S V GF FVE +N A+AA
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGQFGTVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSITVNEAR 80
>gi|428179994|gb|EKX48863.1| hypothetical protein GUITHDRAFT_151713 [Guillardia theta CCMP2712]
Length = 160
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAF--NPP----GFAFVEFSNQIDAEAA 62
GT++YVG L+ + EDL F +FGK++ V + P GF FV +S DAE A
Sbjct: 34 GTKLYVGNLSFDTRGEDLMQYFSQFGKVDDTTVIMDRDDPGRSRGFGFVTYSTIADAEYA 93
Query: 63 CDSMNDQDLMGSKLRVEIS 81
++ + MG +RV +S
Sbjct: 94 ISKTDNVEWMGRNIRVNMS 112
>gi|121583453|ref|YP_973884.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120596707|gb|ABM40142.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 150
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L TV+ EDL+ F +FG + S V GF FVE +N A+AA
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSITVNEAR 80
>gi|345480430|ref|XP_001601630.2| PREDICTED: hypothetical protein LOC100117370 [Nasonia
vitripennis]
Length = 377
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAE 60
M R T+++VG L E + E+L F +FG++ V + FV + + DA
Sbjct: 6 MVSPSSPRKTKIFVGRLPENCRSEELRNLFLRFGEVTECDVMNR---YGFVHMAREEDAA 62
Query: 61 AACDSMNDQDLMGSKLRVEISRGR 84
A ++++ G+ + VE S G+
Sbjct: 63 EAIKALHNTSFKGATINVEQSTGK 86
>gi|403342322|gb|EJY70479.1| hypothetical protein OXYTRI_08772 [Oxytricha trifallax]
Length = 471
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDS 65
T ++VG + T E L+ +FE G + +V + + G+AF++FS + +AE A
Sbjct: 185 STEIFVGNIPFTTDAETLKAKFEAIGTIVNVSIPMSGKRMKGYAFIKFSTRAEAEKAVKK 244
Query: 66 MNDQDLMGSKLRVEISRGR 84
+ND D G +L+V S G+
Sbjct: 245 LNDFDFDGRQLKVNFSSGK 263
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++YVG L+ E L F +FG++ + + GF FV FS + A AA D
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 65 SMNDQDLMGSKLRVEISRGR 84
++N+Q+L G ++RV ++ R
Sbjct: 62 ALNEQELDGRRIRVNVANAR 81
>gi|71668509|gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGYRGG 96
>gi|73987334|ref|XP_868600.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Canis
lupus familiaris]
Length = 185
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|351699548|gb|EHB02467.1| Cold-inducible RNA-binding protein, partial [Heterocephalus
glaber]
Length = 167
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDSRSRGYRGG 96
>gi|149034582|gb|EDL89319.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
gi|149034583|gb|EDL89320.1| cold inducible RNA binding protein, isoform CRA_d [Rattus
norvegicus]
Length = 176
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|426229493|ref|XP_004008825.1| PREDICTED: cold-inducible RNA-binding protein [Ovis aries]
Length = 171
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|148699638|gb|EDL31585.1| cold inducible RNA binding protein, isoform CRA_a [Mus musculus]
gi|149034578|gb|EDL89315.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
gi|149034579|gb|EDL89316.1| cold inducible RNA binding protein, isoform CRA_b [Rattus
norvegicus]
Length = 168
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|384248651|gb|EIE22134.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 797
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMN 67
V G + T + + +F +FG L SVWVA PPGFAF+E+ + DAE A ++
Sbjct: 2 VVCYGCSFTAEALLILWQFIRFGTLRSVWVARKPPGFAFIEYEDVRDAEDAVRKLD 57
>gi|326505708|dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 226
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R +VG L+ + E L+ F K+GK+ V + GFAFV F + E A +
Sbjct: 8 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 67
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGG 92
MN DL G + V+ ++ +G GR G
Sbjct: 68 MNGLDLEGRAITVDKAQPQGVGRDRNG 94
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++Y+G L + DLE F K+G + V + + P GFAFVEF ++ DAEAA D
Sbjct: 6 KLYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAIDG 65
Query: 66 MNDQDLMGSKLRV 78
N QD+ G ++ V
Sbjct: 66 CNGQDVNGRQITV 78
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L V+ DLE F +FG + S V GF FVE +++ +A+AA
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G L V +R
Sbjct: 62 QGMNGQPLGGRSLVVNEAR 80
>gi|148699639|gb|EDL31586.1| cold inducible RNA binding protein, isoform CRA_b [Mus musculus]
Length = 176
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWV-----AFNPPGFAFVEFSNQIDAEAACDS 65
++++GGL+ +E L F K+G + V V GF FV++ N DA+ A D
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDG 65
Query: 66 MNDQDLMGSKLRVEISRGRGRGRG 89
MN Q L G +RV+ + GR RG
Sbjct: 66 MNGQTLDGRTIRVDEAGKGGRSRG 89
>gi|6680946|ref|NP_031731.1| cold-inducible RNA-binding protein [Mus musculus]
gi|346644681|ref|NP_001231002.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|46395643|sp|P60826.1|CIRBP_CRIGR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|46397383|sp|P60825.1|CIRBP_RAT RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|46397384|sp|P60824.1|CIRBP_MOUSE RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=A18 hnRNP; AltName: Full=Glycine-rich RNA-binding
protein CIRP
gi|1060919|dbj|BAA11213.1| CIRP [Mus musculus]
gi|1783168|dbj|BAA19092.1| CIRP [Rattus norvegicus]
gi|12852647|dbj|BAB29491.1| unnamed protein product [Mus musculus]
gi|34099624|gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
gi|49522692|gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
gi|74209036|dbj|BAE21245.1| unnamed protein product [Mus musculus]
gi|115345819|gb|ABI95367.1| cold-inducible RNA-binding protein [Cricetulus griseus]
gi|148699640|gb|EDL31587.1| cold inducible RNA binding protein, isoform CRA_c [Mus musculus]
gi|149034580|gb|EDL89317.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
gi|149034581|gb|EDL89318.1| cold inducible RNA binding protein, isoform CRA_c [Rattus
norvegicus]
Length = 172
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
T+VYVG L+ + + L F ++G++ V + GF FV FS++ +AEAA
Sbjct: 2 STKVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
+S+++QDL G +++V ++ R
Sbjct: 62 NSLHEQDLDGRRIKVNLANAR 82
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQI 57
D + ++VG L+ + +E + F K K+ S+ + + P GFA+V FS+
Sbjct: 386 DVISPESDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVD 445
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGR 84
DA+AA +++N DL G +R++ ++ R
Sbjct: 446 DAKAAFEALNGSDLDGRPVRLDFAKPR 472
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R +VGGL+ + LE F KFG L V + GF FV F ++ E A DS
Sbjct: 8 RCFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDS 67
Query: 66 MNDQDLMGSKLRVEISRGRG 85
M+ L G + V+ +R +
Sbjct: 68 MHGMSLDGRSITVDRARPKS 87
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSPDSRSRGYRGG 96
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L TV+ EDL+ F FG +NS V GF FVE + +A++A
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G L V +R
Sbjct: 62 QGMNGQSLGGRSLVVNEAR 80
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ EDL F +FG +NS V + GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGRGRGRGG 90
+ +N Q + G + V +R R GG
Sbjct: 62 NGLNGQAIGGRAIVVNEARPREDKPGG 88
>gi|344243389|gb|EGV99492.1| Cold-inducible RNA-binding protein [Cricetulus griseus]
Length = 184
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|296232406|ref|XP_002761576.1| PREDICTED: cold-inducible RNA-binding protein [Callithrix
jacchus]
Length = 172
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSPDSRSRGYRGG 96
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R +VG L+ + DL+ F KFG++ V + GF FV F ++ E A ++
Sbjct: 8 RCFVGSLSWSTTDVDLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVEA 67
Query: 66 MNDQDLMGSKLRVEISRGRG 85
MN DL G + VE ++ +G
Sbjct: 68 MNGIDLDGRNITVERAQPQG 87
>gi|390359786|ref|XP_003729564.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like
[Strongylocentrotus purpuratus]
Length = 220
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSN 55
M + + +++V L +T + +E FE FGK++ V + N GF F+ F
Sbjct: 7 MPAAVKDSPNKIFVSNLPKTWDEGRMEKLFETFGKISQVNLMKNKESGDSRGFGFITFDT 66
Query: 56 QIDAEAACDSMNDQDLMGSKLRVEIS 81
DA A MN +D+ G +L+V+ +
Sbjct: 67 AEDANDAIQGMNGKDVEGVQLKVDAA 92
>gi|432101154|gb|ELK29438.1| Cold-inducible RNA-binding protein [Myotis davidii]
Length = 204
Score = 45.8 bits (107), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|326519182|dbj|BAJ96590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 290
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 9/144 (6%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
+G + G+ ++V G+ + + D+ FEK+G + S + +P GF FV+
Sbjct: 61 EGAVNTGSNLFVTGIHPRLTEGDVSRLFEKYGDVESCSIMLDPHTKESRGFGFVKMVTTE 120
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGG 117
AEAA + + + + G L +E +R R R G++ RG +RG GG GGG
Sbjct: 121 QAEAAKEGLQGETIEGRTLSIEKAR---RARPRTPTPGKYFGPPKRGDFRGPPGGGRGGG 177
Query: 118 YRDGGDRFGGGGRGRGDGGFRGSR 141
YRD D GG R D +RGSR
Sbjct: 178 YRDRFDDRRGGYPPRRD-DYRGSR 200
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAF---NPPGFAFVEFSNQIDAEAACDSMND 68
+YVG L V+++++E F K+G + +V V FAFV+F + DA+ A S +
Sbjct: 9 IYVGNLPPDVREKEVEDLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAKEAVRSRDG 68
Query: 69 QDLMGSKLRVE 79
D G +LRVE
Sbjct: 69 YDFDGKRLRVE 79
>gi|62955567|ref|NP_001017797.1| cold inducible RNA binding protein [Danio rerio]
gi|62202782|gb|AAH93299.1| Zgc:112425 [Danio rerio]
gi|63100518|gb|AAH95030.1| Zgc:112425 [Danio rerio]
gi|182889498|gb|AAI65256.1| Zgc:112425 protein [Danio rerio]
Length = 185
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL+ ++ LE F K+G + +V VA N GF FV F N DA+ A +
Sbjct: 6 KLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEG 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G +RV+
Sbjct: 66 MNGKSVDGRTIRVD 79
>gi|308272084|emb|CBX28692.1| Glycine-rich RNA-binding protein 8 [uncultured Desulfobacterium
sp.]
Length = 127
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
++YVG L+ V ++DL FE+ GK++SV + + GF FVE S+ +A+AA +
Sbjct: 1 MKIYVGNLSYEVNEDDLRQAFEQLGKVDSVSIINDKYSGRSKGFGFVEMSSDAEAQAAIE 60
Query: 65 SMNDQDLMGSKLRVEISR 82
+N ++L G + V +R
Sbjct: 61 GLNGKELKGRAINVNEAR 78
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----P-GFAFVEFSNQIDAEAAC 63
+ +++G L+ V ++D+ F + G+++ V + +P P GF +VEF+ Q A+AA
Sbjct: 311 SSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 370
Query: 64 DSMNDQDLMGSKLRVEISRGRGR 86
D+M Q+L G LR++ S R R
Sbjct: 371 DAMTGQELAGRPLRLDFSTPRDR 393
>gi|71897051|ref|NP_001026518.1| cold-inducible RNA-binding protein [Gallus gallus]
gi|53128363|emb|CAG31295.1| hypothetical protein RCJMB04_4m1 [Gallus gallus]
Length = 190
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGYRGG 96
>gi|225711820|gb|ACO11756.1| RNA-binding protein 3 [Lepeophtheirus salmonis]
gi|225712198|gb|ACO11945.1| RNA-binding protein 3 [Lepeophtheirus salmonis]
Length = 154
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
T+++V G+ +T + LE EF K G + V++ G+AFV +N DA+ A +N
Sbjct: 7 TKLFVHGVRDTCPRSVLEDEFSKIGPVTDVYIT--EKGYAFVTMTNSEDADDAARKLNGT 64
Query: 70 DLMGSKLRVEISR 82
+ G +L+VEI+
Sbjct: 65 TVDGQELKVEIAH 77
>gi|430745770|ref|YP_007204899.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
gi|430017490|gb|AGA29204.1| RRM domain-containing RNA-binding protein [Singulisphaera
acidiphila DSM 18658]
Length = 133
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L TV DLE F +FG + S V + GF FVE + +A+AA
Sbjct: 3 GKKLYVGNLAYTVSNTDLEQLFGEFGTVQSAQVIQDRDTGRSKGFGFVEMDSDAEAQAAI 62
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
D ++DQ+ G +L V ++ R
Sbjct: 63 DGLHDQEHGGRRLTVNEAKPR 83
>gi|194477264|ref|YP_002049443.1| RNA-binding protein RbpD [Paulinella chromatophora]
gi|171192271|gb|ACB43233.1| RNA-binding protein RbpD [Paulinella chromatophora]
Length = 132
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDSM 66
+YVG L+ ++EDL+ F ++G ++ V + + GFAFVE +N+ D + A D +
Sbjct: 3 IYVGNLSFDAEQEDLQGLFAQYGDVSKVSLPLDRETGRKRGFAFVEMANEADEQKAIDDL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
D + MG +RV + R
Sbjct: 63 QDVEWMGRMIRVNKAEPRT 81
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ +DL+ F +FG + S V + GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
+ MN Q L G + V +R R
Sbjct: 62 EGMNGQSLSGRAIVVNEARPR 82
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L V+ DLE F +FG + S V GF FVE +++ +A+AA
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G L V +R
Sbjct: 62 QGMNGQPLGGRSLVVNEAR 80
>gi|77735511|ref|NP_001029450.1| cold-inducible RNA-binding protein [Bos taurus]
gi|74353851|gb|AAI02774.1| Cold inducible RNA binding protein [Bos taurus]
gi|296485364|tpg|DAA27479.1| TPA: cold inducible RNA binding protein [Bos taurus]
Length = 213
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
+VYVG L+ E L F +G++ V + GF FV FS+ +A+ A
Sbjct: 2 SAKVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
S+N+QDL G ++RV ++ R
Sbjct: 62 ASLNEQDLDGRRIRVNLANAR 82
>gi|345570960|gb|EGX53775.1| hypothetical protein AOL_s00004g434 [Arthrobotrys oligospora ATCC
24927]
Length = 368
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++V L+ VK++DLE EF +FG ++ + + + P G+AF+ F + D +AA
Sbjct: 102 LFVSRLSYDVKEQDLEREFGRFGPIDRIRLVRDKESKKPRGYAFILFEREKDMKAAFKET 161
Query: 67 NDQDLMGSKLRVEISRGR 84
+ + ++ V++ RGR
Sbjct: 162 DGMRIKDRRISVDVERGR 179
>gi|440800950|gb|ELR21976.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 325
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEA 61
E T++YV GL +E L+ F + G + V + + GFAFV F+ DA A
Sbjct: 8 EEETKLYVAGLHWETNREKLQELFGQHGTVTDVKLIVDHFSGRSRGFAFVSFATSEDATA 67
Query: 62 ACDSMNDQDLMGSKLRVE 79
A D+MN D+ G ++ V+
Sbjct: 68 ARDAMNSADVDGRRIFVK 85
>gi|90077754|dbj|BAE88557.1| unnamed protein product [Macaca fascicularis]
Length = 172
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG ++S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSVVVNEAR 80
>gi|431922216|gb|ELK19307.1| Cold-inducible RNA-binding protein [Pteropus alecto]
Length = 220
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGG 95
MN + + G ++RV+ + R G RGG
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGG 96
>gi|410921712|ref|XP_003974327.1| PREDICTED: nucleolin-like isoform 1 [Takifugu rubripes]
Length = 680
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L + ++ L+ FEK + P GFAFVEF DA A ++ N+ D+
Sbjct: 439 LIVNNLAFSATEDVLQSTFEKATSIRIPQRDGRPKGFAFVEFETVNDATDALENFNNTDI 498
Query: 72 MGSKLRVEISRGRGRGRGGGGRGG 95
G +R+E S+ GRG GG G G
Sbjct: 499 EGRSIRLEYSQNSGRGDGGRGNAG 522
>gi|410921714|ref|XP_003974328.1| PREDICTED: nucleolin-like isoform 2 [Takifugu rubripes]
Length = 672
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L + ++ L+ FEK + P GFAFVEF DA A ++ N+ D+
Sbjct: 425 LIVNNLAFSATEDVLQSTFEKATSIRIPQRDGRPKGFAFVEFETVNDATDALENFNNTDI 484
Query: 72 MGSKLRVEISRGRGRGRGGGGRGG 95
G +R+E S+ GRG GG G G
Sbjct: 485 EGRSIRLEYSQNSGRGDGGRGNAG 508
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 44.7 bits (104), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 28 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 87
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 88 MNGKSVDGRQIRVD 101
>gi|328867594|gb|EGG15976.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 372
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 1 MSDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSN 55
M+ E+ ++VG L ++ L F KFG + ++ + F+ GFAF+EF N
Sbjct: 249 MNQEEKEKSKCLFVGNLPYHYQESHLRDLFIKFGTIATLNIGFDKRTGHNRGFAFIEFEN 308
Query: 56 QIDAEAACDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDS 99
+ DA+ A + + D+ G KLR++ G + + G DS
Sbjct: 309 KADADEAYKTYSTTDVDGRKLRLDWDVGLNKKQDLKGLSKPPDS 352
>gi|197128630|gb|ACH45128.1| putative cold inducible RNA binding protein variant 2c
[Taeniopygia guttata]
Length = 175
Score = 44.7 bits (104), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 132
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L TV+ EDL+ F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G + V +R
Sbjct: 62 AGMNGQSLGGRSITVNEAR 80
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R ++G L+ + E L+ F KFG L V + GF FV F + E A +
Sbjct: 8 RCFIGNLSWSTTDESLKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEG 67
Query: 66 MNDQDLMGSKLRVEISRGRGRGR 88
MN DL G + V+ ++ +G GR
Sbjct: 68 MNGLDLDGRNITVDKAQPQGPGR 90
>gi|341897322|gb|EGT53257.1| CBN-RNP-7 protein [Caenorhabditis brenneri]
Length = 320
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACDSMN 67
++VG + + L EFE +GK+ + + + P G+AF+E+S++ + A +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 68 DQDLMGSKLRVEISRGRGRG-----RGGGGRGGRFDSRGGRGGYRGGGGGYG-GGGYRDG 121
+ G +L V+ RGR + R GGG+G +R + G GGGY D
Sbjct: 166 GIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTRESKAVIEEKEMQSGFGGGYED- 224
Query: 122 GDRFGGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGR 157
+R G R R +R GGG R R+ GG R
Sbjct: 225 RERERSGSRDRRQDSYRN--GGGNDRDRRESSGGFR 258
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans
K601]
Length = 144
Score = 44.3 bits (103), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ +DLE F +FG + S V GF FVE + DA+AA
Sbjct: 2 GNKLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQSLGGRSIVVNEAR 80
>gi|91786529|ref|YP_547481.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91695754|gb|ABE42583.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L TV+ EDL+ F FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G + V +R
Sbjct: 62 AGMNGQSLGGRSITVNEAR 80
>gi|398803602|ref|ZP_10562623.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398096229|gb|EJL86556.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 133
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L TV+ EDL+ F FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G + V +R
Sbjct: 62 AGMNGQSLGGRSITVNEAR 80
>gi|198432071|ref|XP_002131223.1| PREDICTED: similar to Splicing factor, arginine/serine-rich 4
(Pre-mRNA-splicing factor SRP75) (SRP001LB) [Ciona
intestinalis]
Length = 277
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMND 68
G+RV++G L+ + D+E F+ FG++ V + G+ FVEF DAE A MN+
Sbjct: 18 GSRVFIGRLSNRATESDVERFFKGFGRIREVKLK---TGYGFVEFEENRDAEDAVYEMNN 74
Query: 69 QDLMGSKLRVEISRG 83
Q L G ++ VE ++G
Sbjct: 75 QSLCGERVTVEHAKG 89
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACDSMN 67
++VG + + L EFE +GK+ + + + P G+AF+E+S++ + A +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 68 DQDLMGSKLRVEISRGRGRG-----RGGGGRGGRFDSRGGRGGY--RGGGGGYGGGGYRD 120
+ G +L V+ RGR + R GGG+G +R + R G+ GGGY D
Sbjct: 166 GIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTREAKSVIEEREIASGF-GGGYED 224
Query: 121 GGDRFGGGGRGRGDGGFRGSRGGGGYRGGRD 151
DR G R R +R GGG R R+
Sbjct: 225 -RDRERSGSRDRRQDSYRN--GGGNDRDRRE 252
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans
CJ2]
Length = 152
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ EDL+ F +FG + S V GF FVE ++ +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAI 61
Query: 64 DSMNDQDL 71
+ MN Q L
Sbjct: 62 NGMNGQPL 69
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ E L+ F +FG + S V + GF FVE +A+AA
Sbjct: 2 GNKLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
+ MN Q L G + V +R R
Sbjct: 62 NGMNGQPLEGRAVVVNEARPR 82
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R ++G L+ + E L+ F KFG L V F+ GF FV F + E A +
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 66 MNDQDLMGSKLRVEISRGRGRGR 88
MN DL G + V+ ++ +G GR
Sbjct: 68 MNGLDLDGRAITVDKAQPQGPGR 90
>gi|343459003|gb|AEM37660.1| cold inducible RNA binding protein [Epinephelus bruneus]
Length = 176
Score = 43.9 bits (102), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
++++GGL+ +E L F K+G + V V + GF FV++ N DA+ A +
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNSDDAKDALEG 65
Query: 66 MNDQDLMGSKLRVE 79
MN + L G +RV+
Sbjct: 66 MNGKTLDGRAIRVD 79
>gi|62857699|ref|NP_001017228.1| cold-inducible RNA-binding protein [Xenopus (Silurana)
tropicalis]
gi|123910273|sp|Q28IQ9.1|CIRBP_XENTR RecName: Full=Cold-inducible RNA-binding protein; AltName:
Full=Glycine-rich RNA-binding protein CIRP
gi|89268649|emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus (Silurana)
tropicalis]
Length = 166
Score = 43.9 bits (102), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL +E LE F K+G++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ L F K+G ++ V + P GF FV++ N DA+ A D+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 66 MNDQDLMGSKLRV 78
MN Q L G +RV
Sbjct: 66 MNGQSLDGRTIRV 78
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE N +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGNDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSIVVNEAR 80
>gi|346978360|gb|EGY21812.1| glycine-rich RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 175
Score = 43.9 bits (102), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL +E L FE+FG ++ V + GF FV +S DA+ A D
Sbjct: 2 SKLFIGGLAWHTTEETLRSRFEEFGAVDEAVVVKDRDTGRSRGFGFVRYSQDEDAQKAID 61
Query: 65 SMNDQDLMGSKLRVE 79
+MN+ + G +RV+
Sbjct: 62 AMNNVEFDGRTIRVD 76
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 43.5 bits (101), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+VYVG L+ + L F +FG++ V + GF FV FS+ +A+ A S
Sbjct: 4 KVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITS 63
Query: 66 MNDQDLMGSKLRVEISRGR 84
+N+Q+L G ++RV ++ R
Sbjct: 64 LNEQELDGRRIRVNLANAR 82
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
++++GGL+ ++ L F K+G + V V + GF FV++ N DA+ A D+
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + L G +RV+
Sbjct: 66 MNGKTLDGRAIRVD 79
>gi|171693991|ref|XP_001911920.1| hypothetical protein [Podospora anserina S mat+]
gi|170946944|emb|CAP73748.1| unnamed protein product [Podospora anserina S mat+]
Length = 342
Score = 43.5 bits (101), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
DG + G+ ++V G+ +++ ++ FEK+G++ + +P GF FV+
Sbjct: 65 DGAVNPGSNLFVTGIHPRLEEAEVTRLFEKYGEVEKCQIMKDPQTGESRGFGFVKMVTSE 124
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGR 88
AEAA D + + + G L +E +R R R R
Sbjct: 125 MAEAAIDGLRGEVIEGRTLSIEKAR-RARPR 154
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 43.5 bits (101), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ + L+ F +FG + S V + GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
+ MN Q L G + V +R R
Sbjct: 62 NGMNGQPLEGRAIVVNEARPR 82
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGK-LNSVWVAFNPP----GFAFVEFSNQIDAEAAC 63
G +VYVG L+ + L F +FG+ L+S+ + GF FV FS +AE +
Sbjct: 3 GAKVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISI 62
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
MN+Q L G +RV ++ +
Sbjct: 63 QQMNEQPLDGRNIRVNMANAK 83
>gi|402224642|gb|EJU04704.1| RNA-binding domain-containing protein, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 389
Score = 43.5 bits (101), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP----GFAFVEFSNQIDAEAACDSMN 67
+++ L++ V ++DL+ EFE++G + + + +P G+AFV + + D +AA
Sbjct: 115 LFISRLSKKVTEKDLQKEFERYGDIEQIRLVRDPQARSRGYAFVVYERERDMKAAYKDAE 174
Query: 68 DQDLMGSKLRVEISRGRG 85
L+G ++ V++ RGR
Sbjct: 175 GLVLLGKRILVDVERGRT 192
>gi|326491331|dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 43.5 bits (101), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R +VG L+ + E L+ F K+GK+ V + GFAFV F + E A +
Sbjct: 44 RCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKAMEEAIED 103
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGG 92
MN DL G + V+ ++ +G GR G
Sbjct: 104 MNGLDLEGRAITVDKAQPQGVGRDRNG 130
>gi|449542311|gb|EMD33290.1| hypothetical protein CERSUDRAFT_117917 [Ceriporiopsis subvermispora
B]
Length = 378
Score = 43.5 bits (101), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAF----NPPGFAFVEFSNQIDAEAACDSMN 67
++V L + + D+ EFE+FG L V + N +AFV F + D +AA S +
Sbjct: 120 LFVAHLPKHATENDVRREFERFGSLERVRIVRDKRGNSRKYAFVVFERERDMKAAFKSSD 179
Query: 68 DQDLMGSKLRVEISRGRG 85
D +MG+++ V++ RGR
Sbjct: 180 DIAVMGARVLVDVERGRT 197
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
++++GGL+ ++ L F K+G + V V + GF FV++ N DA+ A D+
Sbjct: 6 KLFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + L G +RV+
Sbjct: 66 MNGKTLDGRAIRVD 79
>gi|395513325|ref|XP_003760877.1| PREDICTED: cold-inducible RNA-binding protein [Sarcophilus
harrisii]
Length = 172
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune
H4-8]
Length = 174
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGK-LNSVWVAFNPP----GFAFVEFSNQIDAEAAC 63
T+VYVG L+ + L F FG+ L+S+ + GF FV FS+ +AE+A
Sbjct: 2 STKVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
S+N+Q+L G +++V ++ R
Sbjct: 62 SSLNEQELDGRRIKVNLANAR 82
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ L F K+G ++ V + P GF FV++ N DA+ A D+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 66 MNDQDLMGSKLRV 78
MN Q L G +RV
Sbjct: 66 MNGQSLDGRTIRV 78
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ L F K+G ++ V + P GF FV++ N DA+ A D+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 66 MNDQDLMGSKLRV 78
MN Q L G +RV
Sbjct: 66 MNGQSLDGRTIRV 78
>gi|148235865|ref|NP_001079794.1| cold-inducible RNA-binding protein B [Xenopus laevis]
gi|82247034|sp|Q9DED4.1|CIRBB_XENLA RecName: Full=Cold-inducible RNA-binding protein B; AltName:
Full=Cold-inducible RNA-binding protein 2;
Short=xCIRP2; AltName: Full=Glycine-rich RNA-binding
protein CIRP-B
gi|11761319|dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
gi|32450232|gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
Length = 166
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL +E LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 66 MNGKAVDGRQIRVD 79
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ EDL+ F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSVVVNEAR 80
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 43.1 bits (100), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F +FG++ + + GFAFVE S+ EAA + +
Sbjct: 3 IFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
+LMG LR+ + RG
Sbjct: 63 QGAELMGRPLRINKAEPRG 81
>gi|221048043|gb|ACL98129.1| hyperosmotic glycine rich protein [Epinephelus coioides]
Length = 175
Score = 43.1 bits (100), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
++++GGL+ +E L F K+G + V V + GF FV++ N DA+ A +
Sbjct: 6 KLFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNCDDAKDALEG 65
Query: 66 MNDQDLMGSKLRVE 79
MN + L G +RV+
Sbjct: 66 MNGKTLDGRAIRVD 79
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 43.1 bits (100), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ EDL+ F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSVVVNEAR 80
>gi|78211572|ref|YP_380351.1| RNA recognition motif-containing protein [Synechococcus sp.
CC9605]
gi|78196031|gb|ABB33796.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. CC9605]
Length = 173
Score = 43.1 bits (100), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F +FG++ + + GFAF+E +++ EAA + +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
+LMG LR+ + RG
Sbjct: 63 QGAELMGRPLRINKAEPRG 81
>gi|116071793|ref|ZP_01469061.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
gi|116065416|gb|EAU71174.1| RNA-binding region RNP-1 [Synechococcus sp. BL107]
Length = 229
Score = 42.7 bits (99), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAA 62
+ ++VG L ++ED+ F +FG++ + + GFAFVE S+ EAA
Sbjct: 29 QNVSIFVGNLPFRAEQEDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAA 88
Query: 63 CDSMNDQDLMGSKLRVEISRGRG 85
+ + +LMG LR+ + RG
Sbjct: 89 IEGLQGAELMGRPLRINKAEPRG 111
>gi|7439974|pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
gi|3341887|dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 42.7 bits (99), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 66 MNGKSVDGRQIRVD 79
>gi|334326698|ref|XP_001365067.2| PREDICTED: cold-inducible RNA-binding protein-like [Monodelphis
domestica]
Length = 172
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ +DLE F +FG + S V GF FVE + +A+ A
Sbjct: 2 GNKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQSLGGRSIVVNEAR 80
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 42.7 bits (99), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++++LE F K+G+++ V V + GF FV F N DA+ A ++
Sbjct: 8 KLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEA 67
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 68 MNGKSVDGRQIRVD 81
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACD 64
T + V L+ +E L+ E F K +S+ V N P G+AFV+F+ DA+ A +
Sbjct: 454 STTLIVNNLSYAATEETLQ---EVFKKASSIRVPQNNQGRPKGYAFVDFATAEDAKEALN 510
Query: 65 SMNDQDLMGSKLRVEIS 81
S+N+ ++ G +R+E S
Sbjct: 511 SLNNTEIEGRTIRLEFS 527
>gi|407929404|gb|EKG22234.1| hypothetical protein MPH_00413 [Macrophomina phaseolina MS6]
Length = 159
Score = 42.7 bits (99), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL L +FE+FG++ V + GF FV F+ + DAEAA
Sbjct: 2 SKLFIGGLAWHTDDATLRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRFTQESDAEAAIQ 61
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
+MN+ + G +RV+ + R
Sbjct: 62 AMNNVEFDGRTIRVDKASDRS 82
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis
TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L + + D+E F +FG ++S V GF FVE S+ +A+AA
Sbjct: 2 GNKLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAI 61
Query: 64 DSMNDQDL 71
+ MN Q +
Sbjct: 62 EGMNGQQI 69
>gi|327281621|ref|XP_003225545.1| PREDICTED: nucleolin-like [Anolis carolinensis]
Length = 696
Score = 42.7 bits (99), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACDSMN 67
+ V L+ +E L+ E F K +++ + N P GFAFV+F+ DA+ A +S N
Sbjct: 466 LVVNNLSYDATEESLQ---EVFEKASAIRIPQNNQGRPKGFAFVDFATAEDAKEAMNSCN 522
Query: 68 DQDLMGSKLRVEIS----RGRGRGRGGGGRGGR 96
+ ++ G +R+E S + R +GRGG + +
Sbjct: 523 NTEIEGRAIRLEFSTQGGQNRNQGRGGFSQQSK 555
>gi|417397313|gb|JAA45690.1| Putative rasgap sh3 binding protein rasputin [Desmodus rotundus]
Length = 218
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|328870525|gb|EGG18899.1| SAP DNA-binding domain-containing protein [Dictyostelium
fasciculatum]
Length = 927
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 30 FEKFGKLNSVWVAF--NPPGFAFVEFSNQIDAEAACDSMNDQDLMGSKLRV 78
F FGK+ + P GFAF+++ + DAE A +MND++L K+RV
Sbjct: 451 FSPFGKIKECSIPLAGQPKGFAFIDYESVEDAEKAQKTMNDKELQEYKIRV 501
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPG-----FAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + F FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 42.4 bits (98), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ +DLE F +FG + S V GF FVE + +A+ A
Sbjct: 2 GNKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQSLGGRSIVVNEAR 80
>gi|148231554|ref|NP_001080069.1| cold-inducible RNA-binding protein A [Xenopus laevis]
gi|284018072|sp|O93235.2|CIRBA_XENLA RecName: Full=Cold-inducible RNA-binding protein A; AltName:
Full=Cold-inducible RNA-binding protein; Short=XCIRP;
AltName: Full=Cold-inducible RNA-binding protein 1;
Short=XCIRP-1; AltName: Full=Glycine-rich RNA-binding
protein CIRP-A
gi|27735413|gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 66 MNGKSVDGRQIRVD 79
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGLT ++ L+ F K+G LN V + N P GF FV+F A+AA
Sbjct: 62 KIFLGGLTWQTTEDMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAA--- 118
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRF-DSRGGRGGYRGGG 110
+ ++ ++ + +++ R R R R +S RGG + GG
Sbjct: 119 LKEEHVIDGRT-IDVKRAVPRDRAPLPRAAADRNSANARGGSQVGG 163
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAE 60
M G +++VG L + L F ++G++ V + GF F+ FSNQ A+
Sbjct: 1 MSAGNKLFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQ 60
Query: 61 AACDSMNDQDLMGSKLRV 78
AA D++N+ D+ G +RV
Sbjct: 61 AAIDALNEADVDGRNIRV 78
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSVVVNEAR 80
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ L F K+G ++ V + P GF FV++ N DA+ A D+
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 66 MNDQDLMGSKLRV 78
MN Q L G +RV
Sbjct: 66 MNGQSLDGRTIRV 78
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
T++++GG++ + ++ L F K+G++ + + GF F+ +++ +A +A
Sbjct: 41 STKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAI 100
Query: 64 DSMNDQDLMGSKLRVEISRGRGR 86
+++ QDL G +RV + R R
Sbjct: 101 QALDGQDLHGRPIRVNYANERPR 123
>gi|346979687|gb|EGY23139.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 344
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
DG + G+ ++V G+ + + ++ FEK+G++ + +P GF FV+
Sbjct: 70 DGAINPGSNLFVTGIHPRLSESEVTRLFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSD 129
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGR 88
A+AA + + + + G L +E +R R R R
Sbjct: 130 QADAAKEGLQGEQIDGRTLSIEKAR-RARPR 159
>gi|302404614|ref|XP_003000144.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261360801|gb|EEY23229.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 345
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
DG + G+ ++V G+ + + ++ FEK+G++ + +P GF FV+
Sbjct: 70 DGAINPGSNLFVTGIHPRLSESEVTRLFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSD 129
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGR 88
A+AA + + + + G L +E +R R R R
Sbjct: 130 QADAAKEGLQGEQIDGRTLSIEKAR-RARPR 159
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A AA
Sbjct: 2 GKKLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
++MN L G L V +R
Sbjct: 62 EAMNGHSLQGRALTVNEAR 80
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A AA
Sbjct: 2 GKKLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
++MN L G L V +R
Sbjct: 62 EAMNGHSLQGRALTVNEAR 80
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE +A AA
Sbjct: 2 GKKLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAV 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
++MN L G L V +R
Sbjct: 62 EAMNGHSLQGRALTVNEAR 80
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAV 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G L V +R
Sbjct: 62 QGMNGQPLGGRSLVVNEAR 80
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAV 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G L V +R
Sbjct: 62 QGMNGQPLGGRSLVVNEAR 80
>gi|332663699|ref|YP_004446487.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332332513|gb|AEE49614.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 208
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDSM 66
++V L EDL FE FG+++S V + GF FVE N +A+AA D++
Sbjct: 3 IFVAKLNFGTSSEDLREAFEAFGEVDSAKVIMDHDTGKSRGFGFVEMPNDDEAQAAIDAL 62
Query: 67 NDQDLMGSKLRVEISRGR 84
N+ D G+ + + + R
Sbjct: 63 NETDFDGNTIVCKKAEPR 80
>gi|392896831|ref|NP_001255142.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
gi|3874499|emb|CAB07322.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
Length = 309
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 14 VGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDSMND 68
V L+ ++DL F +FG++N + ++ P GF F+ F+ DA AA D + +
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 69 QDLMGSKLRVEIS 81
DL G K+RV+ S
Sbjct: 140 TDLDGHKIRVDFS 152
>gi|330925215|ref|XP_003300959.1| hypothetical protein PTT_12345 [Pyrenophora teres f. teres 0-1]
gi|311324663|gb|EFQ90950.1| hypothetical protein PTT_12345 [Pyrenophora teres f. teres 0-1]
Length = 275
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 27/138 (19%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAAC 63
G+ ++V G+ T+ +E++ FEK+G++ + +P GF FV+ A+AA
Sbjct: 64 GSNLFVTGIHPTLSEEEVTRLFEKYGEVEQCNIMRDPHTKESRGFGFVKMVTSDQADAAK 123
Query: 64 DSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDGGD 123
+ + + G L +E +R R R R G Y G RD D
Sbjct: 124 EGLQGEVHQGRTLSIEKAR-RARPRT------------------PTPGKYYGPPKRD--D 162
Query: 124 RFGGGGRGRGDGGFRGSR 141
R GG GR R D G RGSR
Sbjct: 163 RRGGYGR-RDDYGSRGSR 179
>gi|326926008|ref|XP_003209198.1| PREDICTED: nucleolin-like [Meleagris gallopavo]
Length = 425
Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 7 ERGTR-VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEA 61
ER ++ + V L+ +E L+ E F K S+ + N P G+AFVEF DA+
Sbjct: 197 ERESKTLIVNNLSYAASEETLQ---ELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKE 253
Query: 62 ACDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDG 121
A +S N+ ++ G +R+E S + RGG F+ + RG R+
Sbjct: 254 ALNSCNNTEIEGRAIRLEFSSPSWQKGNMNARGG-FNQQSKTLFVRGLSEDTTEETLRES 312
>gi|260435624|ref|ZP_05789594.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
gi|260413498|gb|EEX06794.1| RNA-binding region RNP-1 [Synechococcus sp. WH 8109]
Length = 190
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F +FG++ + + GFAF+E +++ EAA + +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVTNCALPLERDTGRKRGFAFIEMADESTEEAAIEGL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
+LMG LR+ + RG
Sbjct: 63 QGAELMGRPLRINKAEPRG 81
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
T++++GG++ + ++ L F K+G++ + + GF F+ +++ +A +A
Sbjct: 42 TKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQ 101
Query: 65 SMNDQDLMGSKLRVEISRGRGRGRG 89
+++ QDL G +RV + R RG G
Sbjct: 102 ALDGQDLHGRPIRVNYANERPRGYG 126
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQALGGRSIVVNEAR 80
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAE 60
ME ++V+VGG++ + + L F K+G++ V + GF FV +++ +A
Sbjct: 40 ME-SSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEAS 98
Query: 61 AACDSMNDQDLMGSKLRVEISRGRGR 86
+A +++ QDL G ++RV + R R
Sbjct: 99 SAIQALDGQDLHGRRVRVNYANDRAR 124
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQALGGRSIVVNEAR 80
>gi|212412|gb|AAA48983.1| nucleolin/C23, partial [Gallus gallus]
Length = 288
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACDSMN 67
+ V L+ +E L+ E F K S+ + N P G+AFVEF DA+ A +S N
Sbjct: 57 LIVNNLSYAASEETLQ---ELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCN 113
Query: 68 DQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDG 121
++ G +R+E S + RGG F+ + RG R+
Sbjct: 114 TTEIEGRAIRLEFSSPSWQKGNMNARGG-FNQQSKTLFVRGLSEDTTEETLRES 166
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 5/78 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----P-GFAFVEFSNQIDAEAAC 63
+ +++G L+ + ++D+ F + G+++ V + +P P GF +VEF+ Q A+AA
Sbjct: 305 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAL 364
Query: 64 DSMNDQDLMGSKLRVEIS 81
D+M Q+L G LR++ S
Sbjct: 365 DAMTGQELAGRPLRLDFS 382
>gi|115470953|ref|NP_001059075.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|33146923|dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|50509452|dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113610611|dbj|BAF20989.1| Os07g0187300 [Oryza sativa Japonica Group]
gi|222636576|gb|EEE66708.1| hypothetical protein OsJ_23377 [Oryza sativa Japonica Group]
Length = 308
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 5 MMERGT-RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQID 58
M E+ R++VGGL+ + LE F ++GK+ V GF FV FS
Sbjct: 1 MAEKEVGRIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRA 60
Query: 59 AEAACDSMNDQDLMGSKLRVEISRGR 84
+AA M++ +L G + V ++ R
Sbjct: 61 VDAAIRGMHNGELDGRTISVNKAQPR 86
>gi|301776322|ref|XP_002923559.1| PREDICTED: cold-inducible RNA-binding protein-like [Ailuropoda
melanoleuca]
Length = 172
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDGGDRF 125
MN + + G ++RV+ + G+ R SRG RGG GG G + GG R G
Sbjct: 67 MNGKSVDGRQIRVDQA-----GKSSDNR-----SRGYRGGSAGGRGFFRGGRGRGRGFSR 116
Query: 126 GGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGGYRGGRDS 168
GGG RG G F GGY G RD Y GGGY G R S
Sbjct: 117 GGGDRGYGGSRFESR--SGGYGGSRDYYSSRSQGGGY-GDRSS 156
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 54 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 113
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDGGDRF 125
MN + + G ++RV+ G+ SRG RGG GG G + GG R G
Sbjct: 114 MNGKSVDGRQIRVD----------QAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSR 163
Query: 126 GGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGGYRGGRDS 168
GGG RG G F GGY G RD Y GGGY G R S
Sbjct: 164 GGGDRGYGGSRFESR--SGGYGGSRDYYSSRSQGGGY-GDRSS 203
>gi|209155104|gb|ACI33784.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|223648252|gb|ACN10884.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 167
Score = 41.2 bits (95), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N +A+ A +
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFENPDEAKDAMLA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + L G ++RV+
Sbjct: 66 MNGKSLDGRQIRVD 79
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
+++VGGL+ + L FE+ G++ V + GF FV FS+ +AEAA
Sbjct: 2 SAKLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAK 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
++N DL G ++RV+ + R
Sbjct: 62 GALNQTDLDGREIRVDSASDR 82
>gi|390341916|ref|XP_789716.3| PREDICTED: TAR DNA-binding protein 43-like [Strongylocentrotus
purpuratus]
Length = 505
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQD 70
++++G LT KEDL F K+G++ V++ GFAFV ++ DA D + +D
Sbjct: 207 KLFIGRLTSDTTKEDLFDIFSKYGEVVDVFIPKPFRGFAFVTMNSSKDA----DEIVGED 262
Query: 71 LMGSKLRVEISRGRGRGRGGGGRGGRF 97
L+ V I+R + R G G RF
Sbjct: 263 LIIKGNSVYINRAEPKARMMGKEGDRF 289
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAA 62
R +++VGGL T+ ++ FE FG + V V ++ P GF F+ F D+E A
Sbjct: 116 RTKKIFVGGLPSTLTEDGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITF----DSEDA 171
Query: 63 CDSMNDQDL--MGSKLRVEISRGRGR 86
D + + +G KL VE+ R R
Sbjct: 172 VDRVLQKTFHDLGGKL-VEVKRALPR 196
>gi|403343651|gb|EJY71156.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 491
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMND 68
++VG L+ ++ L F ++G + +V + P GFAFVEF+ +A+AA D+ N
Sbjct: 242 LFVGNLSFHTTEDSLGQAFGEYGTVTNVKLPQQDGRPKGFAFVEFATHKEAQAALDAYNG 301
Query: 69 QDLMGSKLRVEIS 81
QD G LR+ S
Sbjct: 302 QDFEGRALRINFS 314
>gi|348550387|ref|XP_003461013.1| PREDICTED: LOW QUALITY PROTEIN: cold-inducible RNA-binding
protein-like [Cavia porcellus]
Length = 173
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL+ ++ LE F K+G++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFIGGLSFDTNEQSLEEVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|395831301|ref|XP_003788741.1| PREDICTED: cold-inducible RNA-binding protein [Otolemur garnettii]
Length = 172
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFIGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDGGDRF 125
MN + + G ++RV+ + G+ R SRG RGG GG G + GG R G
Sbjct: 67 MNGKSVDGRQIRVDQA-----GKSSDNR-----SRGYRGGSAGGRGFFRGGRGRGRGFSR 116
Query: 126 GGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGGYRGGRDS 168
GGG RG G F GGY G RD Y GGGY G R S
Sbjct: 117 GGGDRGYGGSRFESR--SGGYGGSRDYYSSRNQGGGY-GDRSS 156
>gi|281341352|gb|EFB16936.1| hypothetical protein PANDA_012739 [Ailuropoda melanoleuca]
Length = 167
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDGGDRF 125
MN + + G ++RV+ + G+ R SRG RGG GG G + GG R G
Sbjct: 67 MNGKSVDGRQIRVDQA-----GKSSDNR-----SRGYRGGSAGGRGFFRGGRGRGRGFSR 116
Query: 126 GGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGGYRGGRDS 168
GGG RG G F GGY G RD Y GGGY G R S
Sbjct: 117 GGGDRGYGGSRFESR--SGGYGGSRDYYSSRSQGGGY-GDRSS 156
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 40.8 bits (94), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
+++++GGL+ + L F K+G++ V + GF FV F++ +A +A
Sbjct: 39 SSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAI 98
Query: 64 DSMNDQDLMGSKLRVEISRGRGR 86
+++ QDL G ++RV + R R
Sbjct: 99 QALDGQDLHGRRVRVNYATDRAR 121
>gi|45384000|ref|NP_990596.1| nucleolin [Gallus gallus]
gi|128840|sp|P15771.1|NUCL_CHICK RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|63711|emb|CAA35060.1| unnamed protein product [Gallus gallus]
Length = 694
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 9/120 (7%)
Query: 7 ERGTR-VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEA 61
ER ++ + V L+ +E L+ E F K S+ + N P G+AFVEF DA+
Sbjct: 457 ERESKTLIVNNLSYAASEETLQ---ELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKE 513
Query: 62 ACDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDG 121
A +S N+ ++ G +R+E S + RGG F+ + RG R+
Sbjct: 514 ALNSCNNTEIEGRAIRLEFSSPSWQKGNMNARGG-FNQQSKTLFVRGLSEDTTEETLRES 572
>gi|348523085|ref|XP_003449054.1| PREDICTED: nucleolin-like isoform 4 [Oreochromis niloticus]
Length = 659
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L+ +E L+ FEK + P GFAF+EF + DA+ A ++ N+ ++
Sbjct: 423 LVVNNLSFNATEEVLQSTFEKAVSIRIPQRDGRPKGFAFLEFESTDDAKDALENFNNTEI 482
Query: 72 MGSKLRVEISRGRGRGRGGGG 92
G +R+E S+ R RG G
Sbjct: 483 EGRSIRLEYSQSRDWNRGNSG 503
>gi|348523081|ref|XP_003449052.1| PREDICTED: nucleolin-like isoform 2 [Oreochromis niloticus]
Length = 706
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L+ +E L+ FEK + P GFAF+EF + DA+ A ++ N+ ++
Sbjct: 470 LVVNNLSFNATEEVLQSTFEKAVSIRIPQRDGRPKGFAFLEFESTDDAKDALENFNNTEI 529
Query: 72 MGSKLRVEISRGRGRGRGGGG 92
G +R+E S+ R RG G
Sbjct: 530 EGRSIRLEYSQSRDWNRGNSG 550
>gi|348523079|ref|XP_003449051.1| PREDICTED: nucleolin-like isoform 1 [Oreochromis niloticus]
Length = 700
Score = 40.8 bits (94), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L+ +E L+ FEK + P GFAF+EF + DA+ A ++ N+ ++
Sbjct: 464 LVVNNLSFNATEEVLQSTFEKAVSIRIPQRDGRPKGFAFLEFESTDDAKDALENFNNTEI 523
Query: 72 MGSKLRVEISRGRGRGRGGGG 92
G +R+E S+ R RG G
Sbjct: 524 EGRSIRLEYSQSRDWNRGNSG 544
>gi|119174818|ref|XP_001239737.1| hypothetical protein CIMG_09358 [Coccidioides immitis RS]
gi|303314545|ref|XP_003067281.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106949|gb|EER25136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037587|gb|EFW19524.1| U1 small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392869929|gb|EAS28470.2| U1 small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 395
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP---------GFAFVEFSNQIDAEAA 62
++V L+ VK+ DLE EF +FG + + + +P G+AF+ + ++D +AA
Sbjct: 104 LFVSRLSYDVKEADLEREFGRFGPIERIRIVTDPSNTNPKKKHRGYAFIVYERELDMKAA 163
Query: 63 CDSMNDQDLMGSKLRVEISRGR 84
+ + ++ V++ RGR
Sbjct: 164 YKETDGIRIKDRRVLVDVERGR 185
>gi|408398954|gb|EKJ78079.1| hypothetical protein FPSE_01540 [Fusarium pseudograminearum CS3096]
Length = 399
Score = 40.8 bits (94), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-------------GFAFVEFSNQID 58
+ V L+ ++DLE EF +FG + + V + G+AFV F + D
Sbjct: 104 LIVARLSYEADEKDLEKEFGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKD 163
Query: 59 AEAACDSMNDQDLMGSKLRVEISRGR 84
AA DS + + +++V++ RGR
Sbjct: 164 MRAALDSCDGMRIKDRRIKVDVERGR 189
>gi|213625217|gb|AAI70091.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 31 EKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEIS 81
E F K S+ + N GFAFVEFS+ DA+ A DS N+ ++ G +R+E S
Sbjct: 483 EVFEKATSIRIPQNQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSIRLEFS 536
>gi|148226518|ref|NP_001081557.1| nucleolin [Xenopus laevis]
gi|295899|emb|CAA51460.1| nucleolin [Xenopus laevis]
Length = 705
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 31 EKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEIS 81
E F K S+ + N GFAFVEFS+ DA+ A DS N+ ++ G +R+E S
Sbjct: 484 EVFEKATSIRIPQNQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSIRLEFS 537
>gi|213623691|gb|AAI70089.1| LOC397919 protein [Xenopus laevis]
Length = 704
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 31 EKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEIS 81
E F K S+ + N GFAFVEFS+ DA+ A DS N+ ++ G +R+E S
Sbjct: 483 EVFEKATSIRIPQNQGRAKGFAFVEFSSMEDAKEAMDSCNNTEVEGRSIRLEFS 536
>gi|33359635|gb|AAQ17065.1| nucleolin 3 [Cyprinus carpio]
gi|33949944|gb|AAQ55855.1| nucleolin [Cyprinus carpio]
Length = 637
Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMND 68
+ V L T ++ L+ FEK S+ + N P GFAF+EF N DA+ A ++ N+
Sbjct: 400 LVVNNLAFTANEDALQSVFEKAV---SIRIPQNNGRPKGFAFLEFENVEDAKEALENCNN 456
Query: 69 QDLMGSKLRVEISRGR 84
++ G +R+E S+
Sbjct: 457 TEIEGRSIRLEFSQSE 472
>gi|401888930|gb|EJT52874.1| hypothetical protein A1Q1_00779 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697640|gb|EKD00896.1| hypothetical protein A1Q2_04769 [Trichosporon asahii var. asahii
CBS 8904]
Length = 141
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 47 GFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEISRGR 84
GF FV + NQ +AEAA ++MN+Q+L G ++RV ++ +
Sbjct: 11 GFGFVTYGNQAEAEAAINAMNEQELDGRRVRVNMANSK 48
>gi|348523083|ref|XP_003449053.1| PREDICTED: nucleolin-like isoform 3 [Oreochromis niloticus]
Length = 658
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L+ +E L+ FEK + P GFAF+EF + DA+ A ++ N+ ++
Sbjct: 422 LVVNNLSFNATEEVLQSTFEKAVSIRIPQRDGRPKGFAFLEFESTDDAKDALENFNNTEI 481
Query: 72 MGSKLRVEISRGRGRGRGGGG 92
G +R+E S+ R RG G
Sbjct: 482 EGRSIRLEYSQSRDWNRGNSG 502
>gi|124024725|ref|YP_001013841.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL1A]
gi|123959793|gb|ABM74576.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL1A]
Length = 250
Score = 40.4 bits (93), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F FG++++ + GFAFVE +++ +A +S+
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 67 NDQDLMGSKLRVEISRGRGRG 87
+LMG LR+ + RG
Sbjct: 63 QGAELMGRPLRINKAEPRGSA 83
>gi|294054726|ref|YP_003548384.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
gi|293614059|gb|ADE54214.1| RNP-1 like RNA-binding protein [Coraliomargarita akajimensis DSM
45221]
Length = 147
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
+YVG L+ +EDLE F G + V++ + P GFAFV + AA +++
Sbjct: 1 MYVGNLSFDATQEDLEGLFSAHGTVTDVFILKDRESGRPRGFAFVSMETPEEMNAAIEAL 60
Query: 67 NDQDLMGSKLRVEISR 82
N ++ MG L + +R
Sbjct: 61 NGEEFMGRNLTINEAR 76
>gi|225706362|gb|ACO09027.1| Cold-inducible RNA-binding protein [Osmerus mordax]
Length = 172
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N +A+ A +
Sbjct: 6 KLFVGGLSFDTNEQSLEDVFSKYGQISEVVVIKDRETQRSRGFGFVTFDNPDEAKDAMLA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + L G ++RV+
Sbjct: 66 MNGKSLDGRQIRVD 79
>gi|46124653|ref|XP_386880.1| hypothetical protein FG06704.1 [Gibberella zeae PH-1]
Length = 393
Score = 40.4 bits (93), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 13/86 (15%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-------------GFAFVEFSNQID 58
+ V L+ ++DLE EF +FG + + V + G+AFV F + D
Sbjct: 104 LIVARLSYEADEKDLEKEFGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKD 163
Query: 59 AEAACDSMNDQDLMGSKLRVEISRGR 84
AA DS + + +++V++ RGR
Sbjct: 164 MRAALDSCDGMRIKDRRIKVDVERGR 189
>gi|410949903|ref|XP_003981656.1| PREDICTED: cold-inducible RNA-binding protein [Felis catus]
Length = 172
Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 81/163 (49%), Gaps = 18/163 (11%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQIAEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGGRGGYRGGGGGYGGGGYRDGGDRF 125
MN + + G ++RV+ + G+ R SRG RGG GG G + GG R G
Sbjct: 67 MNGKSVDGRQIRVDQA-----GKSSDNR-----SRGYRGGSAGGRGFFRGGRGRGRGFSR 116
Query: 126 GGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGGYRGGRDS 168
GGG RG G F GGY G RD Y GGGY G R S
Sbjct: 117 GGGDRGYGGSRFESR--SGGYGGSRDYYSSRSQGGGY-GDRSS 156
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSVVVNEAR 80
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 40.4 bits (93), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSVVVNEAR 80
>gi|60729607|pir||JC7925 nucleolin - common carp
gi|27804344|gb|AAO22235.1| nucleolin [Cyprinus carpio]
Length = 693
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMND 68
+ V L+ + +E L+ FEK S+ V N P GFAF+EF + DA+ A ++ N+
Sbjct: 452 LVVNNLSFSANEESLQSVFEKAV---SIRVPQNNGRPKGFAFLEFESVEDAKEALENCNN 508
Query: 69 QDLMGSKLRVEISRG 83
++ G +R+E S+
Sbjct: 509 TEIEGRSIRLEFSQN 523
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSIVVNEAR 80
>gi|33359633|gb|AAQ17064.1| nucleolin 2 [Cyprinus carpio]
Length = 643
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN--PPGFAFVEFSNQIDAEAACDSMNDQ 69
+ V L T ++ L+ FEK + N P GFAF+EF N DA+ A ++ N+
Sbjct: 400 LVVNNLAFTANEDALQSVFEKAVSYLEYLLETNGRPKGFAFLEFENVEDAKEALENCNNT 459
Query: 70 DLMGSKLRVEISRG 83
++ G +R+E S+
Sbjct: 460 EIEGRSIRLEFSQS 473
>gi|255930353|ref|XP_002556736.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581349|emb|CAP79122.1| Pc06g01290 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 140
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL+ L FE+FG + V + GF FV FS +A AA +
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDDEATAAMN 61
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
+MN+Q+ G ++RV+ + R
Sbjct: 62 AMNNQEFDGRQIRVDKATERA 82
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 40.0 bits (92), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQI 57
D E +R++VG L+ +E L F +G + SV + + P GF +VEF +
Sbjct: 132 DAPSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMPTSRDSGRPKGFGYVEFEDIE 191
Query: 58 DAEAACDSMNDQDLMGSKLRVEISR 82
A+ A +S+ Q++ G +R+E S+
Sbjct: 192 SAKKAHESLVGQEIAGRAIRLEFSQ 216
>gi|425773488|gb|EKV11840.1| hypothetical protein PDIP_54740 [Penicillium digitatum Pd1]
gi|425775784|gb|EKV14036.1| hypothetical protein PDIG_35190 [Penicillium digitatum PHI26]
Length = 343
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
+G + G+ ++V G+ + + D+ FEK+G +++ + +P GF FV
Sbjct: 61 EGAINSGSNLFVTGIHPRLTESDISRLFEKYGDVDNCSIMLDPHTKESRGFGFVNMVTAE 120
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGR 88
A+AA + + + + G L +E +R R R R
Sbjct: 121 QADAAKEGLQGEVIEGRTLSIEKAR-RARPR 150
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 40.0 bits (92), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGG++ + L F ++G++ V V + GF FV F+ DA +A
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 66 MNDQDLMGSKLRVEISRGRGR 86
M+ QDL G ++RV + R R
Sbjct: 101 MDGQDLHGRRIRVNYATERSR 121
>gi|345567860|gb|EGX50762.1| hypothetical protein AOL_s00054g848 [Arthrobotrys oligospora ATCC
24927]
Length = 130
Score = 40.0 bits (92), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL+ L +FE+FG + V + GF FV FSN +A AA +
Sbjct: 2 SKLFIGGLSYGTDDNRLRQKFEEFGVVEDAIVVKDRDTGRSRGFGFVRFSNDDEATAAQE 61
Query: 65 SMNDQDLMGSKLRVEISRGR 84
+MND + G ++RV+ + R
Sbjct: 62 AMNDAEFDGRRIRVDKASDR 81
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ + LE F K+G + V + GF FV F N DA+ A +
Sbjct: 8 KLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHA 67
Query: 66 MNDQDLMGSKLRVEIS 81
MN + L G ++RV+++
Sbjct: 68 MNGESLDGRQIRVDLA 83
>gi|318042980|ref|ZP_07974936.1| RNA recognition motif-containing protein [Synechococcus sp.
CB0101]
Length = 176
Score = 40.0 bits (92), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F FG++ + ++ GFAFVE +++ A D++
Sbjct: 3 IFVGNLPFRAEQEDVAELFAPFGEVTNCFLPLERDTGRKRGFAFVELADEDSESRAIDAL 62
Query: 67 NDQDLMGSKLRV 78
+LMG LR+
Sbjct: 63 QGAELMGRPLRI 74
>gi|255931757|ref|XP_002557435.1| Pc12g05910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582054|emb|CAP80218.1| Pc12g05910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 332
Score = 40.0 bits (92), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
+G + G+ ++V G+ + + D+ FEK+G + + + +P GF FV
Sbjct: 61 EGAVNTGSNLFVTGIHPRLTESDISRLFEKYGDVENCSIMLDPHTKESRGFGFVNMVTAE 120
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGR 88
A+AA + + + + G L +E +R R R R
Sbjct: 121 QADAAKEGLQGEVIEGRTLSIEKAR-RARPR 150
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
MN Q L G + V +R
Sbjct: 62 TGMNGQPLGGRSIVVNEAR 80
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL + LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 6 KLFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 66 MNGKSVDGRQIRVD 79
>gi|283781639|ref|YP_003372394.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
gi|283440092|gb|ADB18534.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
Length = 156
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
R+YVG L T DLE F+ FG + + V + GF FV+ +N D E A +
Sbjct: 4 RIYVGNLPWTYSSSDLEALFKPFGDVAAAEVIMDRETGRSRGFGFVQMANDADCEPAVNG 63
Query: 66 MNDQDLMGSKLRVEISRGRG 85
+N + G L V +R R
Sbjct: 64 LNGTNCNGRPLVVNEARERA 83
>gi|425765484|gb|EKV04163.1| hypothetical protein PDIP_88470 [Penicillium digitatum Pd1]
gi|425778342|gb|EKV16473.1| hypothetical protein PDIG_20660 [Penicillium digitatum PHI26]
Length = 136
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL+ L FE+FG + V + GF FV FS +A AA +
Sbjct: 2 SKLFIGGLSWNTDDNSLRQRFEEFGVVEDATVVKDRDTGRSRGFGFVRFSTDEEATAAMN 61
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
+MN+Q+ G ++RV+ + R
Sbjct: 62 AMNNQEFDGRQIRVDKATERA 82
>gi|396471623|ref|XP_003838913.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
gi|312215482|emb|CBX95434.1| hypothetical protein LEMA_P025860.1 [Leptosphaeria maculans JN3]
Length = 164
Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL + L +FE+FG++ V + GF FV ++N +A+AA
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYANDAEADAAMQ 61
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
++N+++ G ++RV+ + R
Sbjct: 62 ALNNEEFDGRRIRVDKASDRA 82
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 142
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGK-LNSVWVAFNPP----GFAFVEFSNQIDAEAACDS 65
+VYVG L+ + L F ++G L+S+ + GF FV +S +A+AA S
Sbjct: 4 KVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIAS 63
Query: 66 MNDQDLMGSKLRVEISRGR 84
++DQ+L G +++V I+ R
Sbjct: 64 LHDQELDGRRIKVNIANAR 82
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 39.7 bits (91), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
+++VGGL+ +E L F K+G + V V + GF FV++ N DA+ A +
Sbjct: 6 KLFVGGLSFDTTEESLAEAFAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEG 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G +RV+
Sbjct: 66 MNGKSVDGRTIRVD 79
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae
EF01-2]
Length = 175
Score = 39.7 bits (91), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L +V+ DLE F +FG + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQDLMGSKLRVEISR 82
+ MN Q L G + V +R
Sbjct: 62 NGMNGQPLGGRSIVVNEAR 80
>gi|355755275|gb|EHH59022.1| hypothetical protein EGM_09015 [Macaca fascicularis]
Length = 202
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 34/173 (19%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGR---------------------FDSRGGRG 104
MN + + G ++RV+ + R G RGG D G
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYGGN 126
Query: 105 GYRGGGGGYGGGGYRDGGDRFGGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGR 157
+ GGYGG D + + GG+ GG YR D Y G+
Sbjct: 127 RFESRSGGYGGSR-----DYYSSRSQS---GGYSDRSSGGSYRDSYDSYEAGQ 171
>gi|443724663|gb|ELU12567.1| hypothetical protein CAPTEDRAFT_224043 [Capitella teleta]
Length = 454
Score = 39.7 bits (91), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQ 69
T+V+VG L+ + L FE FG++ V GF FV +N+ DA+ A +N
Sbjct: 3 TKVFVGNLSPDCSNDKLRELFEPFGEVVEHDVL---SGFGFVHMANEEDAKNAITGLNGT 59
Query: 70 DLMGSKLRVEISR 82
+++G + VEIS+
Sbjct: 60 NVLGRHISVEISK 72
>gi|45544646|ref|NP_956311.1| cold inducible RNA binding protein isoform 2 [Danio rerio]
gi|28856196|gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
gi|182891172|gb|AAI64022.1| Cirbp protein [Danio rerio]
Length = 184
Score = 39.7 bits (91), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL+ ++ LE F K+G + V V + GF FV F N DA+ A +
Sbjct: 6 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G +RV+
Sbjct: 66 MNGKQVDGRMIRVD 79
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
T++YVG L+ + LE F + G++ S + + GF FVE + AEAA
Sbjct: 2 STKLYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAI 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
++N Q++ G L V +R R
Sbjct: 62 SALNGQEVDGRALTVNEARPR 82
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 39.3 bits (90), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
T++YVG L T + +L+ F + G + SV + + P GF FV Q A+AA
Sbjct: 2 STKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAAV 61
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
++N D G L V +R R
Sbjct: 62 QALNGTDFGGRPLTVNEARPR 82
>gi|301615885|ref|XP_002937390.1| PREDICTED: nucleolin [Xenopus (Silurana) tropicalis]
Length = 705
Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 31 EKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEIS 81
E F K S+ + N GFAF+EFS+ DA+ A DS N+ ++ G +R+E S
Sbjct: 492 EVFEKATSIRIPQNQGRAKGFAFIEFSSVEDAKEAMDSCNNTEIEGRSIRLEFS 545
>gi|221221302|gb|ACM09312.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 131
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ L F K+G + V + P GF FV++ N DA+ A +
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 66 MNDQDLMGSKLRV 78
MN Q L G +RV
Sbjct: 66 MNGQSLDGRTIRV 78
>gi|464252|sp|P20397.3|NUCL_XENLA RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|64937|emb|CAA44805.1| nucleolin [Xenopus laevis]
Length = 651
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 31 EKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEIS 81
E F K S+ + N GFAF+EFS+ DA+ A DS N+ ++ G +R+E S
Sbjct: 433 EVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFS 486
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL + L +FE+FG++ V + GF FV ++ +A+AA
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
+MN+++ G ++RV+ + R
Sbjct: 62 AMNNEEFDGRRIRVDKASDRA 82
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++++GGL + L +FE+FG++ V + GF FV ++ +A+AA
Sbjct: 2 SKLFIGGLAWHTDDQALRQKFEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQ 61
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
+MN+++ G ++RV+ + R
Sbjct: 62 AMNNEEFDGRRIRVDKASDRA 82
>gi|328773817|gb|EGF83854.1| hypothetical protein BATDEDRAFT_21388 [Batrachochytrium
dendrobatidis JAM81]
Length = 161
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Query: 40 WVAFNP---PGFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEISRGR 84
+++FNP GF FVE++ AE A + M DQ+L G +RV+IS R
Sbjct: 19 FLSFNPGRSKGFGFVEYAEPKGAEEAVEKMRDQELDGRTVRVDISNPR 66
>gi|392564615|gb|EIW57793.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 399
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP----GFAFVEFSNQIDAEAACDSMN 67
+++ L + + DL EFE FG + V + + G+AF+ F + D +AA +
Sbjct: 125 LFISRLHKNASESDLRREFESFGSIERVRIVRDKNGRSRGYAFIVFERERDMKAAYKESD 184
Query: 68 DQDLMGSKLRVEISRGRG 85
+MG ++ V++ RGR
Sbjct: 185 RLHIMGKRVLVDVERGRT 202
>gi|225690511|ref|NP_001070120.2| nucleolin [Danio rerio]
Length = 705
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMND 68
+ V L + ++ L+ FEK S+ + N P G+AFVEF N D++ A ++ N+
Sbjct: 467 LVVNNLAFSASEDSLQSVFEKAV---SIRIPQNNGRPKGYAFVEFENVEDSKEALENCNN 523
Query: 69 QDLMGSKLRVEISRG 83
D+ G +R+E S+
Sbjct: 524 TDIEGRSIRLEYSQN 538
>gi|190339446|gb|AAI62643.1| Zgc:152810 protein [Danio rerio]
Length = 708
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMND 68
+ V L + ++ L+ FEK S+ + N P G+AFVEF N D++ A ++ N+
Sbjct: 470 LVVNNLAFSASEDSLQSVFEKAV---SIRIPQNNGRPKGYAFVEFENVEDSKEALENCNN 526
Query: 69 QDLMGSKLRVEISRG 83
D+ G +R+E S+
Sbjct: 527 TDIEGRSIRLEYSQN 541
>gi|115313778|gb|AAI24136.1| Zgc:152810 [Danio rerio]
Length = 704
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMND 68
+ V L + ++ L+ FEK S+ + N P G+AFVEF N D++ A ++ N+
Sbjct: 466 LVVNNLAFSASEDSLQSVFEKAV---SIRIPQNNGRPKGYAFVEFENVEDSKEALENCNN 522
Query: 69 QDLMGSKLRVEISRG 83
D+ G +R+E S+
Sbjct: 523 TDIEGRSIRLEYSQN 537
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
+++G L+ V +E L EFE+FG+L V + + GF +VEF N DA A ++
Sbjct: 247 LFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEAK 306
Query: 67 NDQDLMGSKLRVEISRGR 84
N +L +R++ S R
Sbjct: 307 NGAELDNRAIRLDFSVPR 324
>gi|212539754|ref|XP_002150032.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067331|gb|EEA21423.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
Length = 341
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQI 57
+G + G+ ++V G+ + + D+ FEK+G + + + +P GF FV+
Sbjct: 63 EGAVNPGSNLFVTGIHPRLTEADISRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAE 122
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGRGRGR 88
A+AA + + + + G L +E +R R R R
Sbjct: 123 QADAAKEGLQGEVIDGLTLSIEKAR-RSRPR 152
>gi|49618989|gb|AAT68079.1| nucleolin [Danio rerio]
Length = 667
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN---PPGFAFVEFSNQIDAEAACDSMND 68
+ V L + ++ L+ FEK S+ + N P G+AFVEF N D++ A ++ N+
Sbjct: 429 LVVNNLAFSASEDSLQSVFEKAV---SIRIPQNNGRPKGYAFVEFENVEDSKEALENCNN 485
Query: 69 QDLMGSKLRVEISRG 83
D+ G +R+E S+
Sbjct: 486 TDIEGRSIRLEYSQN 500
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus
sp. WH 8102]
Length = 214
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F +FG++ + + GFAFVE +++ +AA + +
Sbjct: 3 IFVGNLPFRAEQEDVIELFAQFGEVANCALPLERDTGRKRGFAFVEMADEAVEDAAIEGL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
+LMG LR+ + RG
Sbjct: 63 QGAELMGRPLRINKAEPRG 81
>gi|345313668|ref|XP_001512332.2| PREDICTED: cold-inducible RNA-binding protein-like
[Ornithorhynchus anatinus]
Length = 270
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVE 79
MN + + G ++RV+
Sbjct: 67 MNGKSVDGRQIRVD 80
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
++++VGGL+ + L+ F +FG + + + GF F+ F++ +A AA
Sbjct: 32 SKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMT 91
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
SM+ ++L G +RV + R
Sbjct: 92 SMDGKELQGRNIRVNHANERA 112
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
++++VGGL+ + L+ F +FG + + + GF F+ F++ +A AA
Sbjct: 32 SKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMT 91
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
SM+ ++L G +RV + R
Sbjct: 92 SMDGKELQGRNIRVNHANERA 112
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 2 SDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQ 56
S G E G +++VG L+ + L FE FG++ V N GF FV + +
Sbjct: 22 SPGQSEEGYKLFVGNLSFRTESAALREAFEPFGRIVFSTVIENRETGQSRGFGFVVYEQK 81
Query: 57 IDAEAACDSMNDQDLMGSKLRVEISRGR 84
+A+AA M++ +L G LRV +R R
Sbjct: 82 HEADAAISRMDNAELDGRTLRVNFARPR 109
>gi|449268380|gb|EMC79248.1| Nucleolin [Columba livia]
Length = 648
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 7 ERGTR-VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEA 61
ER ++ + V L +E L+ E F K +S+ + N P G+AFVEF DA+
Sbjct: 413 ERESKTLIVNNLAYAASEEALQ---ELFKKASSIKMPQNNQGRPKGYAFVEFPTTEDAKE 469
Query: 62 ACDSMNDQDLMGSKLRVEIS 81
A +S N+ ++ G +R+E S
Sbjct: 470 ALNSCNNTEIEGRAIRLEFS 489
>gi|148708277|gb|EDL40224.1| nucleolin, isoform CRA_e [Mus musculus]
Length = 706
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 488 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 544
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 545 KMEIEGRTIRLEL 557
>gi|124021728|ref|YP_001016035.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962014|gb|ABM76770.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9303]
Length = 202
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F FG++ + + GFAFVE +++ AA +++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEAL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
++MG LR+ + RG
Sbjct: 63 QGAEMMGRPLRINKAEPRG 81
>gi|358391969|gb|EHK41373.1| hypothetical protein TRIATDRAFT_176911, partial [Trichoderma
atroviride IMI 206040]
Length = 392
Score = 38.9 bits (89), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 13/86 (15%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWV-----AFNPP--------GFAFVEFSNQID 58
+ V L+ ++ DLE EF +FG + + + A P G+AFV F + D
Sbjct: 104 LIVARLSYDAEERDLEREFGRFGPIERIRIIVDTHAHEKPNKKKKPHRGYAFVVFEREKD 163
Query: 59 AEAACDSMNDQDLMGSKLRVEISRGR 84
AA D+ + + +++V++ RGR
Sbjct: 164 MRAALDACDGIRIKDRRIKVDVERGR 189
>gi|89902981|ref|YP_525452.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
gi|89347718|gb|ABD71921.1| RNA-binding region RNP-1 [Rhodoferax ferrireducens T118]
Length = 140
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L T + EDL+ F G + S V GF FVE + +A+AA
Sbjct: 2 GNKLYVGNLPYTFRDEDLQQAFAAHGTVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 64 DSMNDQD 70
+ MN Q
Sbjct: 62 NGMNGQQ 68
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 167
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 13 YVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSMN 67
++G L+ + L F +FG++ V + GF FV F +A+AA D +N
Sbjct: 16 HIGNLSWNTNDDTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLN 75
Query: 68 DQDLMGSKLRVEISRGR 84
+QDL G ++RV ++ R
Sbjct: 76 EQDLDGRRIRVNLANAR 92
>gi|27527723|emb|CAC86462.1| glycin-rich RNA binding protein [Polytomella sp. Pringsheim
198.80]
Length = 177
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
+R+YVG L+ K+EDL F KFG++ +A + GF FV + A+ A
Sbjct: 2 SSRLYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGRSRGFGFVTLPADV-AKDAI 60
Query: 64 DSMNDQDLMGSKLRV 78
+ N + MG ++V
Sbjct: 61 EKTNGAEFMGRNIKV 75
>gi|367020140|ref|XP_003659355.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
gi|347006622|gb|AEO54110.1| hypothetical protein MYCTH_2296269 [Myceliophthora thermophila ATCC
42464]
Length = 534
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 3 DGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQI 57
D + ++VG L + ++ + F K K+ S+ + + P GFA+V FS+
Sbjct: 394 DVISPESDTLFVGNLPFSADEDSVSKFFNKAAKVQSLRIPTDQESGRPKGFAYVTFSSVE 453
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGR 84
DA+ A +++N DL G +R++ ++ R
Sbjct: 454 DAKKAFETLNGSDLDGRPVRLDYAKPR 480
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
+YVG L E+L FE FG++ SV + + GFAFVE + A+ A M
Sbjct: 3 IYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTGRSRGFAFVEMEDGEGAQNAVAEM 62
Query: 67 NDQDLMGSKLRVEISRGR 84
N +DL G L V +R R
Sbjct: 63 NGKDLKGRNLVVNEARPR 80
>gi|213510736|ref|NP_001133148.1| cold inducible RNA binding protein [Salmo salar]
gi|197632151|gb|ACH70799.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219968|gb|ACM08645.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|221221054|gb|ACM09188.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 154
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ L F K+G + V + P GF FV++ N DA+ A +
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNIAKCDVIMDRETGRPRGFGFVKYDNAEDAKDAMEG 65
Query: 66 MNDQDLMGSKLRV 78
MN Q L G +RV
Sbjct: 66 MNGQSLDGRTIRV 78
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAAC 63
+++VGGL + + D++ FEKFG + +V + F+ FAFV F + E C
Sbjct: 144 KIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVELVC 201
>gi|268572859|ref|XP_002641430.1| C. briggsae CBR-RSP-8 protein [Caenorhabditis briggsae]
Length = 298
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 14 VGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDSMND 68
V L+ ++DL F +FG++ + ++ P GF F+ F DA AA + + +
Sbjct: 76 VFNLSSYTTEKDLRDVFGEFGEIEKCDLVYDRPSGNSRGFGFIYFEQIDDAAAAREKLCN 135
Query: 69 QDLMGSKLRVEIS 81
DL G K+RV+ S
Sbjct: 136 TDLDGHKIRVDYS 148
>gi|33862287|ref|NP_893847.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9313]
gi|33640400|emb|CAE20189.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9313]
Length = 199
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F FG++ + + GFAFVE +++ AA +++
Sbjct: 3 IFVGNLPFRAEQEDVIELFAPFGEVANCALPLERDTGRKRGFAFVEMADESAEPAAIEAL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
++MG LR+ + RG
Sbjct: 63 QGAEMMGRPLRINKAEPRG 81
>gi|148708274|gb|EDL40221.1| nucleolin, isoform CRA_b [Mus musculus]
Length = 488
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 273 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 329
Query: 68 DQDLMGSKLRVEISRGRGRGRGG 90
++ G +R+E+ R +
Sbjct: 330 KMEIEGRTIRLELQGSNSRSQPS 352
>gi|74177681|dbj|BAE38940.1| unnamed protein product [Mus musculus]
Length = 707
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 489 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 546 KMEIEGRTIRLEL 558
>gi|298712976|emb|CBJ26878.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 314
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAA 62
++V LT VK + L+ F +GK+ SV +A + P G+AFVEF + +AE A
Sbjct: 2 LHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERAEAEQA 57
>gi|148708273|gb|EDL40220.1| nucleolin, isoform CRA_a [Mus musculus]
Length = 537
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 319 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 375
Query: 68 DQDLMGSKLRVEISRGRGRGRGG 90
++ G +R+E+ R +
Sbjct: 376 KMEIEGRTIRLELQGSNSRSQPS 398
>gi|26325114|dbj|BAC26311.1| unnamed protein product [Mus musculus]
Length = 707
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 489 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 546 KMEIEGRTIRLEL 558
>gi|74179817|dbj|BAE36484.1| unnamed protein product [Mus musculus]
Length = 707
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 489 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 546 KMEIEGRTIRLEL 558
>gi|84875537|ref|NP_035010.3| nucleolin [Mus musculus]
gi|128843|sp|P09405.2|NUCL_MOUSE RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|12802527|gb|AAK07920.1|AF318184_1 nucleolin [Mus musculus]
gi|53454|emb|CAA30538.1| nucleolin [Mus musculus]
gi|26350437|dbj|BAC38858.1| unnamed protein product [Mus musculus]
gi|74179984|dbj|BAE36542.1| unnamed protein product [Mus musculus]
gi|74194436|dbj|BAE37270.1| unnamed protein product [Mus musculus]
gi|74201341|dbj|BAE26119.1| unnamed protein product [Mus musculus]
gi|148708278|gb|EDL40225.1| nucleolin, isoform CRA_f [Mus musculus]
Length = 707
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 489 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 546 KMEIEGRTIRLEL 558
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAA 62
+ +++VGG+ ++ ++ L+ F +GK+ + + GF FV F ++ E
Sbjct: 123 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 182
Query: 63 CDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGG--RGGYRGGG 110
DL G ++ ++ + + G G GR SRGG R YRG G
Sbjct: 183 MSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRH-SRGGGHRDSYRGSG 231
>gi|13529464|gb|AAH05460.1| Nucleolin [Mus musculus]
Length = 707
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 489 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 546 KMEIEGRTIRLEL 558
>gi|148241113|ref|YP_001226270.1| RNA-binding protein [Synechococcus sp. RCC307]
gi|147849423|emb|CAK26917.1| RNA-binding protein, RRM domain [Synechococcus sp. RCC307]
Length = 204
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F FG++ + + GFAFVE +++ E A + +
Sbjct: 3 IFVGNLPFRAEQEDIIELFASFGEVANCSLPLERDTGRKRGFAFVEMADEATEERAIEGL 62
Query: 67 NDQDLMGSKLRVEISRGRG 85
+LMG LR+ + RG
Sbjct: 63 QGTELMGRPLRINKAEPRG 81
>gi|26341628|dbj|BAC34476.1| unnamed protein product [Mus musculus]
Length = 550
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 332 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 388
Query: 68 DQDLMGSKLRVEISRGRGRGRGG 90
++ G +R+E+ R +
Sbjct: 389 KMEIEGRTIRLELQGSNSRSQPS 411
>gi|448522881|ref|XP_003868803.1| Cnl1 protein [Candida orthopsilosis Co 90-125]
gi|380353143|emb|CCG25899.1| Cnl1 protein [Candida orthopsilosis]
Length = 267
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP------GFAFVEFSNQIDA 59
M + T +YV G T K DL EFEK+G L V + PP FAFVE+ +
Sbjct: 1 MPKNT-LYVTGFTRESKAVDLAPEFEKYGDL--VRLDIPPPRTSDGQKFAFVEYKDAEGC 57
Query: 60 EAACD 64
E A D
Sbjct: 58 ERALD 62
>gi|451853629|gb|EMD66922.1| hypothetical protein COCSADRAFT_168179 [Cochliobolus sativus
ND90Pr]
Length = 159
Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
++++GGL + L +FE+FG + V + GF FV ++ + +A+AA +
Sbjct: 3 KLFIGGLAWHTDDQTLRSKFEEFGPVEEAVVVKDRDTGRSRGFGFVRYAQETEADAAMQA 62
Query: 66 MNDQDLMGSKLRVEISRGR 84
MN+++ G ++RV+ + R
Sbjct: 63 MNNEEFDGRRIRVDKASDR 81
>gi|354548046|emb|CCE44781.1| hypothetical protein CPAR2_405840 [Candida parapsilosis]
Length = 268
Score = 38.5 bits (88), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 9/65 (13%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP------GFAFVEFSNQIDA 59
M + T +YV G T K DL EFEK+G L V + PP FAFVE+ +
Sbjct: 1 MPKNT-LYVTGFTRESKAVDLAPEFEKYGDL--VRLDIPPPRTSDGEKFAFVEYKDAEGC 57
Query: 60 EAACD 64
E A D
Sbjct: 58 ERALD 62
>gi|341880258|gb|EGT36193.1| CBN-RSP-8 protein [Caenorhabditis brenneri]
Length = 307
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 5/73 (6%)
Query: 14 VGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDSMND 68
V L+ ++DL F +FG+++ + ++ P GF F+ F+ DA AA + + +
Sbjct: 88 VFNLSSYTTEKDLRDVFGEFGEIDKCDLVYDRPSGNSRGFGFIYFNLLEDATAAREKLCN 147
Query: 69 QDLMGSKLRVEIS 81
DL G K+RV+ S
Sbjct: 148 TDLDGHKIRVDYS 160
>gi|74214426|dbj|BAE40448.1| unnamed protein product [Mus musculus]
gi|74219790|dbj|BAE40485.1| unnamed protein product [Mus musculus]
Length = 707
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 489 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 546 KMEIEGRTIRLEL 558
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 182
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
++VYVG L+ + L F +G + V + GF FV + + +AEAA
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAI 62
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
+MN+Q+L G ++RV ++ R
Sbjct: 63 AAMNEQELDGRRVRVNMANSR 83
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
++VYVG L+ + L F +G + V + GF FV + + +AEAA
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAI 62
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
+MN+Q+L G ++RV ++ R
Sbjct: 63 AAMNEQELDGRRVRVNMANSR 83
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSV-----WVAFNPPGFAFVEFSNQIDAEAA 62
+ +++VGG+ ++ +++ + F K+GK+ V+ GF F+ F N++ +
Sbjct: 101 KTKKIFVGGIPTSMNEDEFKGFFSKYGKVVDCEIIRDHVSKRSRGFGFIVFDNELVVDNV 160
Query: 63 CDSMNDQDLMGSKLRVEISRGR--------GRGRGGGGRG-GRFDSRGGRGGYRG--GGG 111
N D++G+++ ++ + + G G G RG G DS GG G G G
Sbjct: 161 LSEGNMIDMLGTQVEIKKAEPKKPSNPASSGHGYGSESRGRGYSDSYGGFGNSYSSFGSG 220
Query: 112 GYGGGGYRDGG 122
G+G YR G
Sbjct: 221 GFGPASYRSSG 231
>gi|26327461|dbj|BAC27474.1| unnamed protein product [Mus musculus]
Length = 707
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP---P-GFAFVEFSNQIDAEAACDSMN 67
+ + L+ + KE LE E F K + V NP P G+AF+EF++ DA+ A +S N
Sbjct: 489 LVLSNLSYSATKETLE---EVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCN 545
Query: 68 DQDLMGSKLRVEI 80
++ G +R+E+
Sbjct: 546 KMEIEGRTIRLEL 558
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 19 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 78
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGR---------------------FDSRGGRG 104
MN + + G ++RV+ + R G RGG D G
Sbjct: 79 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYGGN 138
Query: 105 GYRGGGGGYGGGGYRDGGDRFGGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGG 161
+ GGYGG D + + GG+ GG YR D YG G
Sbjct: 139 RFESRSGGYGGSR-----DYYSSRSQS---GGYSDRSSGGSYRDSYDSYGKSHSEGA 187
>gi|221480563|gb|EEE19030.1| hypothetical protein TGGT1_105690 [Toxoplasma gondii GT1]
gi|221505534|gb|EEE31179.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 430
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
R++VGG+++ V E L F +G++ S V + P GF FV F N DAE A
Sbjct: 217 RLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAI 274
>gi|237838585|ref|XP_002368590.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
gi|211966254|gb|EEB01450.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
Length = 430
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
R++VGG+++ V E L F +G++ S V + P GF FV F N DAE A
Sbjct: 217 RLFVGGISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAI 274
>gi|119589928|gb|EAW69522.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
gi|119589930|gb|EAW69524.1| cold inducible RNA binding protein, isoform CRA_c [Homo sapiens]
Length = 297
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 34/177 (19%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ ++ LE F K+G+++ V V + GF FV F N DA+ A +
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 66 MNDQDLMGSKLRVEISRGRGRGRGGGGRGGR---------------------FDSRGGRG 104
MN + + G ++RV+ + R G RGG D G
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYRGGSAGGRGFFRGGRGRGRGFSRGGGDRGYGGN 126
Query: 105 GYRGGGGGYGGGGYRDGGDRFGGGGRGRGDGGFRGSRGGGGYRGGRDEYGGGRGGGG 161
+ GGYGG D + + GG+ GG YR D YG G
Sbjct: 127 RFESRSGGYGGSR-----DYYSSRSQS---GGYSDRSSGGSYRDSYDSYGKSHSEGA 175
>gi|225680987|gb|EEH19271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226292701|gb|EEH48121.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 148
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
++++VGGL + L FEK+G + V + GF FV FS ++A+AA +
Sbjct: 2 SKLFVGGLAWHTTDQTLRQGFEKYGTIEEAIVVKDRDTNRSRGFGFVRFSRDVEADAAMN 61
Query: 65 SMNDQDLMGSKLRVEISRGRGRGR--------GGGGRGGRFD 98
+M++Q+ G +RV+ + R G GG RFD
Sbjct: 62 AMSNQEFDGRVIRVDKASDRASAHRNDGGGYHGRGGGYHRFD 103
>gi|168699727|ref|ZP_02732004.1| putative RNA-binding protein [Gemmata obscuriglobus UQM 2246]
Length = 113
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 47 GFAFVEFSNQIDAEAACDSMNDQDLMGSKLRVEISRGR 84
GF FVE +N+ +A+AA D++N+Q + G L V I++ R
Sbjct: 24 GFGFVEMANEQEAQAAIDALNNQLMNGRPLTVNIAKPR 61
>gi|432854496|ref|XP_004067929.1| PREDICTED: nucleolin-like isoform 2 [Oryzias latipes]
Length = 651
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L + ++ L+ FEK + P GFAF+EF N DA+ A ++ N+ ++
Sbjct: 416 LVVNNLAFSATEDVLQSTFEKAASIRIPQRDGRPKGFAFIEFENAEDAKEALENFNNTEI 475
Query: 72 MGSKLRVEISR 82
G +R+E S+
Sbjct: 476 EGRSIRLEYSQ 486
>gi|126314629|ref|XP_001373122.1| PREDICTED: nucleolin-like [Monodelphis domestica]
Length = 705
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACDSMN 67
+ + L + +E L+ E F K S+ + N P G+AF+EF++ DA+ A +S N
Sbjct: 479 LVLNNLAYSATEESLQ---EVFEKATSISLPQNNQGRPKGYAFIEFASVEDAKEALNSCN 535
Query: 68 DQDLMGSKLRVEI 80
+ ++ G +R+E+
Sbjct: 536 NIEIEGRAIRLEL 548
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAAC 63
+++VGGL + + D++ FEKFG + +V + F+ FAFV F + E C
Sbjct: 144 KIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVELVC 201
>gi|336272443|ref|XP_003350978.1| hypothetical protein SMAC_04282 [Sordaria macrospora k-hell]
gi|380090745|emb|CCC04915.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 192
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ L +FE+FG + V + GF FV ++N DAE A +
Sbjct: 3 KLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYANDADAENAIAN 62
Query: 66 MNDQDLMGSKLRVEISRGRG 85
M+ Q+ G ++RV+ + R
Sbjct: 63 MDGQEFDGRRVRVDKASDRA 82
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
++++VGGL+ + L+ F ++G + V + GF F+ F + +A +A
Sbjct: 39 SSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASAL 98
Query: 64 DSMNDQDLMGSKLRVEISRGRGRG 87
+M+ QDL G ++RV + + R
Sbjct: 99 QAMDGQDLHGRRIRVNYATEKRRA 122
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL + LE F K+G + V V + GF FV F N DA+ A +
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G +RV+
Sbjct: 66 MNGKSVDGRMIRVD 79
>gi|389627542|ref|XP_003711424.1| hypothetical protein MGG_07511 [Magnaporthe oryzae 70-15]
gi|351643756|gb|EHA51617.1| hypothetical protein MGG_07511 [Magnaporthe oryzae 70-15]
Length = 324
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAAC 63
G+ ++V G+ + + ++ FEK+G++ + +P GF FV+ A+AA
Sbjct: 77 GSNLFVTGIHPRLTEAEVTRMFEKYGEVEKCQIMRDPHTRESRGFGFVKMVTSDQADAAK 136
Query: 64 DSMNDQDLMGSKLRVEISRGRGRGR 88
+ + ++L G L +E +R R R R
Sbjct: 137 EGLQGEELEGRTLSIEKAR-RARPR 160
>gi|403418000|emb|CCM04700.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----PGFAFVEFSNQIDAEAACDSMN 67
+++ L ++ DL EFE FG + V + + G+AF+ F + D +AA +
Sbjct: 120 LFIARLHKSATDSDLRREFEGFGSIERVRIVRDKRGRSRGYAFIVFERERDMKAAYKESD 179
Query: 68 DQDLMGSKLRVEISRGR 84
+MG ++ V++ RGR
Sbjct: 180 RLHIMGKRVLVDVERGR 196
>gi|432854498|ref|XP_004067930.1| PREDICTED: nucleolin-like isoform 3 [Oryzias latipes]
Length = 694
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L + ++ L+ FEK + P GFAF+EF N DA+ A ++ N+ ++
Sbjct: 459 LVVNNLAFSATEDVLQSTFEKAASIRIPQRDGRPKGFAFIEFENAEDAKEALENFNNTEI 518
Query: 72 MGSKLRVEISR 82
G +R+E S+
Sbjct: 519 EGRSIRLEYSQ 529
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 14/84 (16%)
Query: 11 RVYVGGLT-ETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQ--IDAEAA 62
+++VGGL+ ET +KE L F K+G++ S+ V +P GFAF+ F+N ID +A
Sbjct: 57 KLFVGGLSWETTEKE-LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 63 CDSMNDQDLMGSKLRVEISRGRGR 86
D+ ++ SK +V+ + + R
Sbjct: 116 V----DEHIINSK-KVDPKKAKAR 134
>gi|432854500|ref|XP_004067931.1| PREDICTED: nucleolin-like isoform 4 [Oryzias latipes]
Length = 655
Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L + ++ L+ FEK + P GFAF+EF N DA+ A ++ N+ ++
Sbjct: 420 LVVNNLAFSATEDVLQSTFEKAASIRIPQRDGRPKGFAFIEFENAEDAKEALENFNNTEI 479
Query: 72 MGSKLRVEISR 82
G +R+E S+
Sbjct: 480 EGRSIRLEYSQ 490
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 161
Score = 37.7 bits (86), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
++VYVG L+ + L F +G + V + GF FV + + +AEAA
Sbjct: 3 ASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAI 62
Query: 64 DSMNDQDLMGSKLRVEISRGR 84
+MN+Q+L G ++RV ++ R
Sbjct: 63 AAMNEQELDGRRVRVNMANSR 83
>gi|296416697|ref|XP_002838011.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633906|emb|CAZ82202.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDSM 66
+++ L VK+ DLE EF +FG + + + + G+AF+ + + D +AA
Sbjct: 102 LFLSRLNYNVKEPDLEREFGRFGPIERIRIVRDKETGKHRGYAFIVYEREKDMKAAYKET 161
Query: 67 NDQDLMGSKLRVEISRGR 84
+ + ++ V++ RGR
Sbjct: 162 DGIRIKDRRVLVDVERGR 179
>gi|126137477|ref|XP_001385262.1| hypothetical protein PICST_67925 [Scheffersomyces stipitis CBS
6054]
gi|126092484|gb|ABN67233.1| nucleolar shuttling protein with an RNA recognition motif
[Scheffersomyces stipitis CBS 6054]
Length = 270
Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 6 MERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP------GFAFVEFSNQIDA 59
M + T +YV G T K DL +FEK+G+L V + PP +AFVE+ +
Sbjct: 1 MPKNT-LYVTGFTRESKAADLAPDFEKYGEL--VRLDIPPPRTDDGEKYAFVEYKDAESC 57
Query: 60 EAACD 64
E A +
Sbjct: 58 ERALE 62
>gi|432854494|ref|XP_004067928.1| PREDICTED: nucleolin-like isoform 1 [Oryzias latipes]
Length = 698
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPGFAFVEFSNQIDAEAACDSMNDQDL 71
+ V L + ++ L+ FEK + P GFAF+EF N DA+ A ++ N+ ++
Sbjct: 463 LVVNNLAFSATEDVLQSTFEKAASIRIPQRDGRPKGFAFIEFENAEDAKEALENFNNTEI 522
Query: 72 MGSKLRVEISR 82
G +R+E S+
Sbjct: 523 EGRSIRLEYSQ 533
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 14/84 (16%)
Query: 11 RVYVGGLT-ETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQ--IDAEAA 62
+++VGGL+ ET +KE L F K+G++ S+ V +P GFAF+ F+N ID +A
Sbjct: 57 KLFVGGLSWETTEKE-LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 63 CDSMNDQDLMGSKLRVEISRGRGR 86
D+ ++ SK +V+ + + R
Sbjct: 116 A----DEHIINSK-KVDPKKAKAR 134
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 14/84 (16%)
Query: 11 RVYVGGLT-ETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQ--IDAEAA 62
+++VGGL+ ET +KE L F K+G++ S+ V +P GFAF+ F+N ID +A
Sbjct: 57 KLFVGGLSWETTEKE-LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 63 CDSMNDQDLMGSKLRVEISRGRGR 86
D+ ++ SK +V+ + + R
Sbjct: 116 A----DEHIINSK-KVDPKKAKAR 134
>gi|320165600|gb|EFW42499.1| nuclear localization sequence binding protein [Capsaspora
owczarzaki ATCC 30864]
Length = 321
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L+ V K+DL F ++ L +A++ GF VEFSN A A + +
Sbjct: 162 LFVGNLSWAVSKDDLYNHFSQYEGLTDARIAWDRDMDRSKGFGHVEFSNADSAAKALEEL 221
Query: 67 NDQDLMGSKLRVEISRGRGRGRGGGG 92
N DL G +R++ + R G G G
Sbjct: 222 NGSDLGGRAIRLDFAGERANGGGNGA 247
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 14/84 (16%)
Query: 11 RVYVGGLT-ETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQ--IDAEAA 62
+++VGGL+ ET +KE L F K+G++ S+ V +P GFAF+ F+N ID +A
Sbjct: 57 KLFVGGLSWETTEKE-LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSA 115
Query: 63 CDSMNDQDLMGSKLRVEISRGRGR 86
D+ ++ SK +V+ + + R
Sbjct: 116 A----DEHIINSK-KVDPKKAKAR 134
>gi|71987750|ref|NP_493049.2| Protein HRP-2, isoform a [Caenorhabditis elegans]
gi|42733185|emb|CAB70238.2| Protein HRP-2, isoform a [Caenorhabditis elegans]
Length = 611
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAA 62
+G +YVG + V ++ L FEK GK+ + + +P G+AFV + N+ DA AA
Sbjct: 198 QGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAA 257
Query: 63 CDSMNDQDL-MGSKLRVEISRGRGR 86
+ + ++ G L+V +S R
Sbjct: 258 AKTYDGHEISTGKPLKVNVSIANTR 282
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+VYVG L+ + L F +FG + V + GF FV F +A+AA ++
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINN 63
Query: 66 MNDQDLMGSKLRVEISRGR 84
+N+Q+L G ++RV ++ +
Sbjct: 64 LNEQELDGRRIRVNLANAK 82
>gi|72383177|ref|YP_292532.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. NATL2A]
gi|72003027|gb|AAZ58829.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. NATL2A]
Length = 250
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F FG++++ + GFAFVE +++ +A +S+
Sbjct: 3 IFVGNLPFRAEQEDVMELFSPFGEVSNCSLPLERDTGRKRGFAFVEMADEAVEASAIESL 62
Query: 67 NDQDLMGSKLRVEISRGRGRG--R 88
+LMG LR+ + RG R
Sbjct: 63 QGAELMGRPLRINKAEPRGSAPRR 86
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAA 62
+ +++VGG+ ++ ++ L+ F +GK+ + + GF FV F ++ E
Sbjct: 179 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 238
Query: 63 CDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGG--RGGYRGGG 110
DL G ++ ++ + + G G GR SRGG R YRG G
Sbjct: 239 MSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRH-SRGGGHRDSYRGSG 287
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
++++VGGL+ + L+ F ++G++ V + GF F+ F + +A +A
Sbjct: 39 SSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAM 98
Query: 64 DSMNDQDLMGSKLRVEISRGRGR 86
+M+ QDL G +++V + + R
Sbjct: 99 QAMDGQDLHGRRIKVNYATEKRR 121
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
T +YVG L+ +E+L FE++G++++V + + GFAFVE ++ A+ A +
Sbjct: 66 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 125
Query: 65 SMNDQDLMGSKLRVEISRGR 84
++N ++ G + V +R R
Sbjct: 126 NLNGHEIDGRSVTVNEARPR 145
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
+++++GGL+ + L F K+G++ V + GF FV F++ +A +A
Sbjct: 39 SSKLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAI 98
Query: 64 DSMNDQDLMGSKLRVEISRGRGR 86
+++ QDL G ++RV + R R
Sbjct: 99 QALDGQDLHGRRVRVNYATDRAR 121
>gi|164427760|ref|XP_965121.2| hypothetical protein NCU02736 [Neurospora crassa OR74A]
gi|157071873|gb|EAA35885.2| predicted protein [Neurospora crassa OR74A]
Length = 200
Score = 37.4 bits (85), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
+++VGGL+ L +FE+FG + V + GF FV + N DAE A
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIA 61
Query: 65 SMNDQDLMGSKLRVEISRGRG 85
+M+ Q+ G ++RV+ + R
Sbjct: 62 NMDGQEFDGRRVRVDKASDRA 82
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
G ++YVG L + + EDL+ F + G ++S V GF FVE + +A+ A
Sbjct: 8 GNKLYVGNLPYSFRDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAI 67
Query: 64 DSMNDQDL 71
+MN Q
Sbjct: 68 SAMNGQQF 75
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 2 SDGMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPG--FAFVEFSNQIDA 59
+DG + T VY+ + + +E ++ EF FG++ S+ V +P G FAFV ++ A
Sbjct: 218 NDGTPKNFTNVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPKGRRFAFVNYAEFEQA 277
Query: 60 EAACDSMNDQDL 71
AA + M+ +D+
Sbjct: 278 RAAVEEMDGKDV 289
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 37.4 bits (85), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
+++VGGL + ++EDL F+ +G +NS+ + + GF FVEF + + C
Sbjct: 102 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 161
Query: 66 MNDQDLMGSKLRVEISRGRG 85
N Q + G + V+ + R
Sbjct: 162 RNHQ-IRGKHVDVKKALSRA 180
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+VYVG L+ + L F +FG++ V + GF FV FS+ +A+AA
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGG 63
Query: 66 MNDQDLMGSKLRVEISRGR 84
+N+Q+L G +++V ++ R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
>gi|299115545|emb|CBN75749.1| serine/arginine rich splicing factor, putative [Ectocarpus
siliculosus]
Length = 308
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
+ V + T E+L FE GKL V++ + P GFAFV + ++ DA+ A D +
Sbjct: 4 LKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADYAVDRL 63
Query: 67 NDQDLMGSKLRVEISRGR 84
+ G +LR++ +R R
Sbjct: 64 DGTRFNGRELRIQYARKR 81
>gi|346971277|gb|EGY14729.1| U1 small nuclear ribonucleoprotein [Verticillium dahliae VdLs.17]
Length = 416
Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP--------------GFAFVEFSNQI 57
+ V L+ ++DLE EF +FG + + + + G+AFV F +
Sbjct: 104 LIVARLSYEANEQDLEREFGRFGNIERIRIITDTHAHEKSKNKKKKPHRGYAFVVFERER 163
Query: 58 DAEAACDSMNDQDLMGSKLRVEISRGR 84
D AA DS + + +++V++ RGR
Sbjct: 164 DMRAALDSCDGIRIKDRRIKVDVERGR 190
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 11 RVYVGGLT-ETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACD 64
+++VGGL+ ET +KE L F K+G++ S+ V +P GFAF+ F+N E
Sbjct: 57 KLFVGGLSWETTEKE-LRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKV-- 113
Query: 65 SMNDQDLMGSKLRVEISRGRGR 86
S ++ ++ SK +V++ + + R
Sbjct: 114 SAVEEHIINSK-KVDLPKAKAR 134
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
+++VGG+ E +++ DL F+++G + S + + GFAFVEF + + C S
Sbjct: 109 KLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLS 168
Query: 66 MNDQ 69
N Q
Sbjct: 169 RNHQ 172
>gi|299116448|emb|CBN76167.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 498
Score = 37.0 bits (84), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACD 64
GTRV+VGGL V ED++ F G L + F+ G A V F + DAE A
Sbjct: 107 GTRVHVGGLNFDVMDEDIKELFAGVGDLLHCKIDFDRTGRSNGNALVIFKRREDAENAVS 166
Query: 65 SMNDQDLMGSKLRVEISRG 83
+ + L G+ + VEI G
Sbjct: 167 QFHKRTLDGTPMIVEIVEG 185
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 11 RVYVGGLT-ETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACD 64
+++VGGL+ ET +KE L F KFG++ S+ V +P GFAF+ F+N E
Sbjct: 58 KLFVGGLSWETTEKE-LRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEQV-- 114
Query: 65 SMNDQDLMGSKLRVEISRGRGR 86
S ++ ++ SK +V+ + + R
Sbjct: 115 SAAEEHIINSK-KVDPKKAKAR 135
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
+++VGGL + ++EDL F+ +G +NS+ + + GF FVEF + + C
Sbjct: 109 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 66 MNDQ 69
N Q
Sbjct: 169 RNHQ 172
>gi|291237133|ref|XP_002738491.1| PREDICTED: GL21338-like [Saccoglossus kowalevskii]
Length = 504
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 5 MMERGTRVYVGGLTETVKKEDLELEFEKFGKLNS--------VWVAFN-----PPGFAFV 51
M ++ V+V GL +TV +E L F + G + + +W+ N P G +
Sbjct: 262 MEQQHDTVFVSGLLKTVTEEQLAEHFGQIGVIKNDRRTNKPKIWMYMNKETGEPKGECTI 321
Query: 52 EFSNQIDAEAACDSMNDQDLMGS--KLRVEISR 82
+ + A+AA + N + L G+ +++VE ++
Sbjct: 322 TYDDASAAKAAIEWFNGKPLAGNGPEIKVEFAQ 354
>gi|417404108|gb|JAA48828.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 713
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN----PPGFAFVEFSNQIDAEAACDSMN 67
+ + L+ + +E L+ E F K S+ VA N G+AF+EF++ DA+ A +S N
Sbjct: 491 LVLSNLSYSATEETLQ---EVFEKATSIKVAQNQNGKSKGYAFIEFASFEDAKEALNSCN 547
Query: 68 DQDLMGSKLRVEI--SRGRGRGRGGGGR 93
+++ G +R+E+ RG R +
Sbjct: 548 KREIEGRAIRLELQGPRGSPNARSQPSK 575
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 8 RGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAA 62
+ +++VGG+ ++ ++ L+ F +GK+ + + GF FV F ++ E
Sbjct: 48 KTKKIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERV 107
Query: 63 CDSMNDQDLMGSKLRVEISRGRGRGRGGGGRGGRFDSRGG--RGGYRGGG 110
DL G ++ ++ + + G G GR SRGG R YRG G
Sbjct: 108 MSEGRMHDLGGKQVEIKKAEPKKPGAGDSSSNGRH-SRGGGHRDSYRGSG 156
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
+++VGGL + ++EDL F+ +G +NS+ + + GF FVEF + + C
Sbjct: 140 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 199
Query: 66 MNDQ 69
N Q
Sbjct: 200 RNHQ 203
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
T +YVG L+ +E+L FE++G++++V + + GFAFVE ++ A+ A +
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 65 SMNDQDLMGSKLRVEISRGR 84
++N ++ G + V +R R
Sbjct: 115 NLNGHEIDGRSVTVNEARPR 134
>gi|421614043|ref|ZP_16055112.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
gi|408495250|gb|EKJ99839.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SH28]
Length = 189
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
T +YVG L+ +E+L FE++G++++V + + GFAFVE ++ A+ A +
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 65 SMNDQDLMGSKLRVEISRGR 84
++N ++ G + V +R R
Sbjct: 115 NLNGHEIDGRSVTVNEARPR 134
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEA 61
E ++VG L+ V E L+ EF + G++ S V + GF +VEF++ A+
Sbjct: 269 EEVKSIFVGRLSWNVDDEWLKTEFAEAGEVVSARVQMDRQTGKSKGFGYVEFADAASAKK 328
Query: 62 ACDSMNDQDLMGSKLRVEISRGRG 85
A ++MN +++ G + ++++ RG
Sbjct: 329 AVETMNGREIDGRPVNLDLATPRG 352
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 36.6 bits (83), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 10 TRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACD 64
T +YVG L+ +E+L FE++G++++V + + GFAFVE ++ A+ A +
Sbjct: 55 TNIYVGNLSFKATEEELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIE 114
Query: 65 SMNDQDLMGSKLRVEISRGR 84
++N ++ G + V +R R
Sbjct: 115 NLNGHEIDGRSVTVNEARPR 134
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 36.6 bits (83), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 4 GMMERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQID 58
G++ +V+VGGL +V ++D FE+FG++ V F+ GF FV F +
Sbjct: 202 GVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEE-- 259
Query: 59 AEAACDSMNDQDLMGSKLRVEISRGRGR 86
A + ++ + K+ VEI R +
Sbjct: 260 -GAVAEVISKTHELHGKV-VEIKRAEPK 285
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----PGFAFVEFSNQIDAEAACDSMN 67
+++ L ++ + DL EFE FG + V + + G+AF+ F + D +AA +
Sbjct: 120 LFIARLHKSATEGDLRREFEGFGSIERVRIVRDKNGRSQGYAFIVFERERDMKAAYKESD 179
Query: 68 DQDLMGSKLRVEISRGR 84
+MG ++ V++ RGR
Sbjct: 180 RLHIMGKRVLVDVERGR 196
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 36.6 bits (83), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
+++VGGL + ++EDL F+ +G +NS+ + + GF FVEF + + C
Sbjct: 109 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 66 MNDQ 69
N Q
Sbjct: 169 RNHQ 172
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEA 61
E+ ++++GGL+ +E L +E++GKL V +P GF FV FS+ + +A
Sbjct: 6 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 65
Query: 62 AC 63
A
Sbjct: 66 AM 67
>gi|212529894|ref|XP_002145104.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
gi|210074502|gb|EEA28589.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
Length = 382
Score = 36.6 bits (83), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVA-----FNPP----GFAFVEFSNQIDAEAA 62
++V L+ VK+ DLE EF +FG + + + NP G+AF+ + + D +AA
Sbjct: 104 LFVARLSYDVKESDLEREFGRFGPIERIRIVKDSENPNPKKPHRGYAFIVYEREKDMKAA 163
Query: 63 CDSMNDQDLMGSKLRVEISRGR 84
+ + ++ V++ RGR
Sbjct: 164 YKETDGIRIKDRRVLVDVERGR 185
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 36.2 bits (82), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL + LE F K+G + V V + GF FV F N DA+ A +
Sbjct: 6 KLFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAA 65
Query: 66 MNDQDLMGSKLRVE 79
MN + + G +RV+
Sbjct: 66 MNGKSVDGRMIRVD 79
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 2 SDGMMERGT----RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVE 52
++ MER ++++GGL+ +E L +E++GKL V +P GF FV
Sbjct: 24 TESAMEREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVT 83
Query: 53 FSNQIDAEAAC 63
FS+ + +AA
Sbjct: 84 FSSMAEVDAAM 94
>gi|149016333|gb|EDL75579.1| nucleolin, isoform CRA_d [Rattus norvegicus]
gi|149016334|gb|EDL75580.1| nucleolin, isoform CRA_d [Rattus norvegicus]
Length = 496
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----PGFAFVEFSNQIDAEAACDSMN 67
+ + L+ + +E L+ E F K + V NP G+AF+EF++ DA+ A +S N
Sbjct: 274 LVLSNLSYSATEETLQ---EVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 330
Query: 68 DQDLMGSKLRVEIS--RGRGRGRGGGGR 93
++ G +R+E+ RG R +
Sbjct: 331 KMEIEGRTIRLELQGPRGSPNARSQPSK 358
>gi|159902554|ref|YP_001549898.1| RNA recognition motif-containing protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887730|gb|ABX07944.1| RNA-binding region RNP-1 (RNA recognition motif) [Prochlorococcus
marinus str. MIT 9211]
Length = 245
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDSM 66
++VG L ++ED+ F FG++ + + GFAF+E +++ +A +++
Sbjct: 3 IFVGNLPFRAEQEDVIQLFAPFGEVANCSLPLERDTGRKRGFAFIEMADEAAESSAIEAL 62
Query: 67 NDQDLMGSKLRVEISRGR 84
+LMG LR+ + R
Sbjct: 63 QGAELMGRPLRINKAEPR 80
>gi|226222462|gb|ACO38649.1| nucleolin-like protein [Rattus norvegicus]
Length = 569
Score = 36.2 bits (82), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----PGFAFVEFSNQIDAEAACDSMN 67
+ + L+ + +E L+ E F K + V NP G+AF+EF++ DA+ A +S N
Sbjct: 347 LVLSNLSYSATEETLQ---EVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 403
Query: 68 DQDLMGSKLRVEIS--RGRGRGRGGGGR 93
++ G +R+E+ RG R +
Sbjct: 404 KMEIEGRTIRLELQGPRGSPNARSQPSK 431
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEA 61
E+ ++++GGL+ +E L +E++GKL V +P GF FV FS+ + +A
Sbjct: 4 EQFRKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 63
Query: 62 AC 63
A
Sbjct: 64 AM 65
>gi|149016335|gb|EDL75581.1| nucleolin, isoform CRA_e [Rattus norvegicus]
Length = 505
Score = 36.2 bits (82), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----PGFAFVEFSNQIDAEAACDSMN 67
+ + L+ + +E L+ E F K + V NP G+AF+EF++ DA+ A +S N
Sbjct: 283 LVLSNLSYSATEETLQ---EVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 339
Query: 68 DQDLMGSKLRVEIS--RGRGRGRGGGGR 93
++ G +R+E+ RG R +
Sbjct: 340 KMEIEGRTIRLELQGPRGSPNARSQPSK 367
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEA 61
E+ ++++GGL+ +E L +E++GKL V +P GF FV FS+ + +A
Sbjct: 6 EQFRKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 65
Query: 62 AC 63
A
Sbjct: 66 AM 67
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 36.2 bits (82), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPPG-----FAFVEFSNQIDAEAAC 63
+++VGGL + + D++ FEKFG + +V + F+ FAFV F + + C
Sbjct: 115 KIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSVDLVC 172
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAACDS 65
+++VGGL + ++EDL F+ +G +NS+ + + GF FVEF + + C
Sbjct: 109 KLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQ 168
Query: 66 MNDQ 69
N Q
Sbjct: 169 RNHQ 172
>gi|453087961|gb|EMF16002.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 348
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN--------PPGFAFVEFSNQIDAEAAC 63
++VG L +DLE EF +FG + V + + P G+AF+ F + D +AA
Sbjct: 106 LFVGRLPYDCTTKDLEKEFGRFGPIERVRIVTDRSEKAKGKPRGYAFILFEREKDMKAAY 165
Query: 64 DSMNDQDLMGSKLRVEISRGRG 85
+ G + V++ RGR
Sbjct: 166 KECERLQIRGRMVLVDVERGRT 187
>gi|440468942|gb|ELQ38069.1| hypothetical protein OOU_Y34scaffold00552g23 [Magnaporthe oryzae
Y34]
gi|440480554|gb|ELQ61213.1| hypothetical protein OOW_P131scaffold01198g45 [Magnaporthe oryzae
P131]
Length = 415
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEAAC 63
G+ ++V G+ + + ++ FEK+G++ + +P GF FV+ A+AA
Sbjct: 83 GSNLFVTGIHPRLTEAEVTRMFEKYGEVEKCQIMRDPHTRESRGFGFVKMVTSDQADAAK 142
Query: 64 DSMNDQDLMGSKLRVEISRGRGRGR 88
+ + ++L G L +E +R R R R
Sbjct: 143 EGLQGEELEGRTLSIEKAR-RARPR 166
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 36.2 bits (82), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 9 GTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAAC 63
+V+VG L+ ++DL F FG++ V + + GFAFV F + A A
Sbjct: 4 ACKVFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAI 63
Query: 64 DSMNDQDLMGSKLRV 78
M+++D +G + V
Sbjct: 64 KEMHEEDFLGRSVTV 78
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 36.2 bits (82), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 11 RVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFN-----PPGFAFVEFSNQIDAEAACDS 65
+++VGGL+ E LE F ++G++ V + GF FV F+N DA A
Sbjct: 9 KLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAANAKKC 68
Query: 66 MNDQDLMGSKLRVEISRGRGR 86
M+ +L ++RV+ + +
Sbjct: 69 MDGTELDSRQIRVDYASKKSE 89
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEA 61
E+ ++++GGL+ +E L +E++GKL V +P GF FV FS+ + +A
Sbjct: 6 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 65
Query: 62 ACDS 65
A +
Sbjct: 66 AMSA 69
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 36.2 bits (82), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 7 ERGTRVYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNPP-----GFAFVEFSNQIDAEA 61
E+ ++++GGL+ +E L +E++GKL V +P GF FV FS+ + +A
Sbjct: 6 EQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDA 65
Query: 62 ACDS 65
A +
Sbjct: 66 AMSA 69
>gi|128844|sp|P13383.3|NUCL_RAT RecName: Full=Nucleolin; AltName: Full=Protein C23
gi|205792|gb|AAA41732.1| nucleolin [Rattus norvegicus]
Length = 713
Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----PGFAFVEFSNQIDAEAACDSMN 67
+ + L+ + +E L+ E F K + V NP G+AF+EF++ DA+ A +S N
Sbjct: 491 LVLSNLSYSATEETLQ---EVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 547
Query: 68 DQDLMGSKLRVEI--SRGRGRGRGGGGR 93
++ G +R+E+ RG R +
Sbjct: 548 KMEIEGRTIRLELQGPRGSPNARSQPSK 575
>gi|161760644|ref|NP_036881.2| nucleolin [Rattus norvegicus]
gi|55250726|gb|AAH85751.1| Nucleolin [Rattus norvegicus]
gi|149016332|gb|EDL75578.1| nucleolin, isoform CRA_c [Rattus norvegicus]
Length = 714
Score = 35.8 bits (81), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 12 VYVGGLTETVKKEDLELEFEKFGKLNSVWVAFNP----PGFAFVEFSNQIDAEAACDSMN 67
+ + L+ + +E L+ E F K + V NP G+AF+EF++ DA+ A +S N
Sbjct: 492 LVLSNLSYSATEETLQ---EVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCN 548
Query: 68 DQDLMGSKLRVEI--SRGRGRGRGGGGR 93
++ G +R+E+ RG R +
Sbjct: 549 KMEIEGRTIRLELQGPRGSPNARSQPSK 576
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.149 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,885,462,209
Number of Sequences: 23463169
Number of extensions: 349461698
Number of successful extensions: 7132533
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 38736
Number of HSP's successfully gapped in prelim test: 48024
Number of HSP's that attempted gapping in prelim test: 2381844
Number of HSP's gapped (non-prelim): 1387672
length of query: 207
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 71
effective length of database: 9,168,204,383
effective search space: 650942511193
effective search space used: 650942511193
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)