Your job contains 1 sequence.
>psy2355
MLESRLKGDNPDQNGTSVQTDEQQYLHLLDKIIKTIIRYQKTLHHSHTMFNLLPIFSPQG
DNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLT
TKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVY
GFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPC
HCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKGY
RRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNV
TQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVN
LKRQPAQPRPAHIVSGRTAPVMLAPIPYEFIA
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2355
(452 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-59 - symbol:tyms "thymidylate syntha... 883 1.7e-90 2
MGI|MGI:98878 - symbol:Tyms "thymidylate synthase" specie... 894 1.4e-89 1
RGD|3921 - symbol:Tyms "thymidylate synthetase" species:1... 889 4.6e-89 1
UNIPROTKB|F1N8Y2 - symbol:TYMS "Thymidylate synthase" spe... 883 2.0e-88 1
UNIPROTKB|F1MY63 - symbol:TYMS "Thymidylate synthase" spe... 877 8.6e-88 1
UNIPROTKB|Q2TA32 - symbol:TYMS "Thymidylate synthase" spe... 877 8.6e-88 1
UNIPROTKB|P04818 - symbol:TYMS "Thymidylate synthase" spe... 874 1.8e-87 1
UNIPROTKB|F1PNL9 - symbol:TYMS "Uncharacterized protein" ... 872 2.9e-87 1
UNIPROTKB|F1PU23 - symbol:TYMS "Uncharacterized protein" ... 872 2.9e-87 1
TAIR|locus:2042649 - symbol:THY-1 "thymidylate synthase 1... 832 5.0e-83 1
FB|FBgn0024920 - symbol:Ts "Ts" species:7227 "Drosophila ... 830 8.2e-83 1
TAIR|locus:2139544 - symbol:THY-2 "thymidylate synthase 2... 827 1.7e-82 1
CGD|CAL0005915 - symbol:CDC21 species:5476 "Candida albic... 648 7.5e-78 2
WB|WBGene00022455 - symbol:Y110A7A.4 species:6239 "Caenor... 772 1.1e-76 1
POMBASE|SPAC15E1.04 - symbol:SPAC15E1.04 "thymidylate syn... 767 3.9e-76 1
SGD|S000005600 - symbol:CDC21 "Thymidylate synthase" spec... 734 1.2e-72 1
UNIPROTKB|G4MSD5 - symbol:MGG_04458 "Thymidylate synthase... 587 4.7e-72 2
UNIPROTKB|Q8WYK3 - symbol:TS "Thymidylate synthetase, iso... 467 3.7e-70 2
ASPGD|ASPL0000066643 - symbol:AN7028 species:162425 "Emer... 691 4.4e-68 1
FB|FBgn0032987 - symbol:RpL21 "Ribosomal protein L21" spe... 667 1.5e-65 1
UNIPROTKB|Q0C504 - symbol:thyA "Thymidylate synthase" spe... 379 7.7e-64 2
UNIPROTKB|J9NSP4 - symbol:J9NSP4 "Uncharacterized protein... 605 5.7e-59 1
UNIPROTKB|F1NP85 - symbol:RPL21 "Uncharacterized protein"... 604 7.3e-59 1
RGD|2321753 - symbol:LOC100360604 "ribosomal protein L21-... 600 1.9e-58 1
UNIPROTKB|Q6PDW2 - symbol:LOC100360604 "RCG42727, isoform... 600 1.9e-58 1
UNIPROTKB|P46778 - symbol:RPL21 "60S ribosomal protein L2... 599 2.5e-58 1
UNIPROTKB|F1RTJ9 - symbol:RPL21 "60S ribosomal protein L2... 599 2.5e-58 1
UNIPROTKB|Q861S4 - symbol:RPL21 "Similar to ribosomal pro... 597 4.0e-58 1
ZFIN|ZDB-GENE-030131-8512 - symbol:rpl21 "ribosomal prote... 593 1.1e-57 1
UNIPROTKB|J9NXT7 - symbol:LOC478864 "Uncharacterized prot... 592 1.4e-57 1
UNIPROTKB|J9P4T5 - symbol:LOC100855701 "Uncharacterized p... 592 1.4e-57 1
RGD|1583496 - symbol:LOC681195 "similar to ribosomal prot... 592 1.4e-57 1
RGD|2321582 - symbol:LOC100364176 "ribosomal protein L21-... 592 1.4e-57 1
RGD|2324079 - symbol:LOC100362779 "ribosomal protein L21-... 592 1.4e-57 1
RGD|2320757 - symbol:LOC100361103 "ribosomal protein L21-... 591 1.7e-57 1
UNIPROTKB|F1PWM2 - symbol:RPL21 "Uncharacterized protein"... 588 3.6e-57 1
RGD|68390 - symbol:Rpl21 "ribosomal protein L21" species:... 588 3.6e-57 1
MGI|MGI:1278340 - symbol:Rpl21 "ribosomal protein L21" sp... 587 4.6e-57 1
TIGR_CMR|CBU_1547 - symbol:CBU_1547 "thymidylate synthase... 330 1.8e-56 2
UNIPROTKB|G5E6D6 - symbol:G5E6D6 "Uncharacterized protein... 580 2.5e-56 1
UNIPROTKB|J9NVK8 - symbol:J9NVK8 "Uncharacterized protein... 579 3.3e-56 1
RGD|1562601 - symbol:RGD1562601 "similar to ribosomal pro... 578 4.2e-56 1
RGD|1562923 - symbol:RGD1562923 "similar to ribosomal pro... 577 5.3e-56 1
UNIPROTKB|F1N7U3 - symbol:Bt.86815 "Uncharacterized prote... 574 1.1e-55 1
UNIPROTKB|P67044 - symbol:thyA "Thymidylate synthase" spe... 333 1.3e-55 2
RGD|2321746 - symbol:LOC100360611 "ribosomal protein L21-... 571 2.3e-55 1
RGD|1562839 - symbol:RGD1562839 "similar to ribosomal pro... 570 2.9e-55 1
RGD|1561815 - symbol:RGD1561815 "similar to ribosomal pro... 569 3.7e-55 1
RGD|1565370 - symbol:RGD1565370 "similar to ribosomal pro... 568 4.8e-55 1
RGD|2320219 - symbol:LOC100364846 "ribosomal protein L21-... 568 4.8e-55 1
RGD|1566270 - symbol:RGD1566270 "similar to ribosomal pro... 567 6.1e-55 1
TIGR_CMR|BA_2236 - symbol:BA_2236 "thymidylate synthase" ... 355 6.9e-55 2
RGD|1562469 - symbol:RGD1562469 "similar to ribosomal pro... 566 7.8e-55 1
RGD|1565159 - symbol:RGD1565159 "similar to ribosomal pro... 564 1.3e-54 1
RGD|1589437 - symbol:LOC680639 "similar to ribosomal prot... 564 1.3e-54 1
RGD|1566326 - symbol:RGD1566326 "similar to ribosomal pro... 561 2.6e-54 1
RGD|1560414 - symbol:RGD1560414 "similar to ribosomal pro... 558 5.5e-54 1
RGD|1564552 - symbol:RGD1564552 "similar to ribosomal pro... 558 5.5e-54 1
RGD|1561875 - symbol:RGD1561875 "similar to ribosomal pro... 557 7.0e-54 1
UNIPROTKB|F1LWH4 - symbol:F1LWH4 "Uncharacterized protein... 554 1.5e-53 1
UNIPROTKB|F1MUN0 - symbol:F1MUN0 "Uncharacterized protein... 552 2.4e-53 1
RGD|2322974 - symbol:LOC100363471 "ribosomal protein L21-... 552 2.4e-53 1
RGD|1586616 - symbol:LOC686080 "similar to ribosomal prot... 548 6.3e-53 1
RGD|1597962 - symbol:LOC682512 "similar to ribosomal prot... 548 6.3e-53 1
RGD|1562929 - symbol:RGD1562929 "similar to ribosomal pro... 546 1.0e-52 1
RGD|2318391 - symbol:LOC100365794 "ribosomal protein L21-... 545 1.3e-52 1
RGD|1562971 - symbol:RGD1562971 "similar to ribosomal pro... 536 1.2e-51 1
RGD|1561957 - symbol:RGD1561957 "similar to ribosomal pro... 529 6.5e-51 1
RGD|1559531 - symbol:RGD1559531 "similar to 60S ribosomal... 516 1.5e-49 1
UNIPROTKB|F1PL86 - symbol:F1PL86 "Uncharacterized protein... 509 8.5e-49 1
SGD|S000000395 - symbol:RPL21A "Ribosomal 60S subunit pro... 509 8.5e-49 1
RGD|1564634 - symbol:RGD1564634 "similar to ribosomal pro... 506 1.8e-48 1
SGD|S000006000 - symbol:RPL21B "Ribosomal 60S subunit pro... 506 1.8e-48 1
WB|WBGene00004433 - symbol:rpl-21 species:6239 "Caenorhab... 505 2.3e-48 1
UNIPROTKB|Q8WYK4 - symbol:TS "Thymidylate synthase" speci... 418 3.7e-48 2
UNIPROTKB|D4A9T8 - symbol:D4A9T8 "Uncharacterized protein... 501 6.0e-48 1
UNIPROTKB|F1MSB9 - symbol:F1MSB9 "Uncharacterized protein... 498 1.2e-47 1
UNIPROTKB|D4A4U4 - symbol:D4A4U4 "Uncharacterized protein... 498 1.2e-47 1
ASPGD|ASPL0000075029 - symbol:AN4802 species:162425 "Emer... 497 1.6e-47 1
TAIR|locus:2049389 - symbol:AT2G21550 species:3702 "Arabi... 491 6.9e-47 1
POMBASE|SPAC959.08 - symbol:rpl2102 "60S ribosomal protei... 483 4.8e-46 1
POMBASE|SPBC365.03c - symbol:rpl2101 "60S ribosomal prote... 483 4.8e-46 1
RGD|1594606 - symbol:LOC691874 "similar to ribosomal prot... 451 1.2e-42 1
RGD|1595537 - symbol:LOC678883 "hypothetical protein LOC6... 451 1.2e-42 1
UNIPROTKB|E1BM31 - symbol:E1BM31 "Uncharacterized protein... 249 4.7e-42 2
TAIR|locus:2206480 - symbol:AT1G57660 species:3702 "Arabi... 441 1.4e-41 1
TAIR|locus:2009410 - symbol:AT1G57860 species:3702 "Arabi... 441 1.4e-41 1
TAIR|locus:2012275 - symbol:AT1G09590 species:3702 "Arabi... 431 1.6e-40 1
TAIR|locus:2024387 - symbol:AT1G09690 species:3702 "Arabi... 431 1.6e-40 1
RGD|1565713 - symbol:RGD1565713 "similar to ribosomal pro... 426 5.3e-40 1
UNIPROTKB|F1M081 - symbol:F1M081 "Uncharacterized protein... 423 1.1e-39 1
UNIPROTKB|F1M1P0 - symbol:F1M1P0 "Uncharacterized protein... 422 1.4e-39 1
UNIPROTKB|I3LB48 - symbol:TYMS "Thymidylate synthase" spe... 417 4.8e-39 1
UNIPROTKB|J9NYS9 - symbol:J9NYS9 "Uncharacterized protein... 416 6.1e-39 1
RGD|1566281 - symbol:RGD1566281 "similar to ribosomal pro... 414 9.9e-39 1
UNIPROTKB|J9NZU6 - symbol:J9NZU6 "Uncharacterized protein... 410 2.6e-38 1
UNIPROTKB|F1LVT4 - symbol:LOC691365 "Protein LOC691365" s... 409 3.4e-38 1
UNIPROTKB|F1M361 - symbol:F1M361 "Uncharacterized protein... 407 5.5e-38 1
RGD|1565555 - symbol:RGD1565555 "similar to ribosomal pro... 401 2.4e-37 1
UNIPROTKB|G3MZB4 - symbol:G3MZB4 "Uncharacterized protein... 399 3.9e-37 1
WARNING: Descriptions of 23 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-040426-59 [details] [associations]
symbol:tyms "thymidylate synthase" species:7955
"Danio rerio" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;IDA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0060041 "retina development in camera-type
eye" evidence=IMP] [GO:0042083
"5,10-methylenetetrahydrofolate-dependent methyltransferase
activity" evidence=IDA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 ZFIN:ZDB-GENE-040426-59
GO:GO:0060041 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 HSSP:P04818 CTD:7298 HOVERGEN:HBG001934 EMBL:AY005804
IPI:IPI00510414 RefSeq:NP_571835.1 UniGene:Dr.1047
ProteinModelPortal:Q9DGH5 SMR:Q9DGH5 STRING:Q9DGH5 GeneID:81540
KEGG:dre:81540 InParanoid:Q9DGH5 NextBio:20934154
ArrayExpress:Q9DGH5 Uniprot:Q9DGH5
Length = 319
Score = 883 (315.9 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 157/221 (71%), Positives = 190/221 (85%)
Query: 69 SVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKG 128
S+ DE+ YL L++ I++ G KK DRTG G +S+FG Q R+ L + FPLLTTKRVFWKG
Sbjct: 31 SLFCDERGYLSLVEFILQNGAKKGDRTGTGVISVFGTQARYSLRD-QFPLLTTKRVFWKG 89
Query: 129 VVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYG 188
++EELLWFIKGSTNAK+LS+KGV+IWD N +RE+LD G DR+EGDLGPVYGFQWRH+G
Sbjct: 90 ILEELLWFIKGSTNAKDLSEKGVRIWDANGSREFLDKNGFTDREEGDLGPVYGFQWRHFG 149
Query: 189 AEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYV 248
AEYKDM TDY+ +G+DQLQ +I+TIK+NP DRRIIMCAWNP D+P MALPPCH L QFYV
Sbjct: 150 AEYKDMHTDYSGEGVDQLQKVIDTIKSNPEDRRIIMCAWNPKDLPLMALPPCHALCQFYV 209
Query: 249 ADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
++G+LSCQLYQRS D+GLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 210 SNGELSCQLYQRSGDIGLGVPFNIASYALLTYMIAHITGLK 250
Score = 39 (18.8 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 3 ESRLKGDNPDQNGTSVQTDEQQYLHLLDKIIK 34
ES+ + N + S+ DE+ YL L++ I++
Sbjct: 17 ESKKEETNGGKKEFSLFCDERGYLSLVEFILQ 48
>MGI|MGI:98878 [details] [associations]
symbol:Tyms "thymidylate synthase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=ISO]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0004799 "thymidylate
synthase activity" evidence=ISO] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005759
"mitochondrial matrix" evidence=ISO] [GO:0006231 "dTMP biosynthetic
process" evidence=ISO] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0046078 "dUMP
metabolic process" evidence=ISO] [GO:0048037 "cofactor binding"
evidence=ISO] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 MGI:MGI:98878
GO:GO:0005634 GO:GO:0005743 GO:GO:0000166 GO:GO:0042493
GO:GO:0005759 GO:GO:0007568 GO:GO:0031100 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0046683
GO:GO:0005542 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574
GO:GO:0006235 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL CTD:7298 HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP
GO:GO:0046078 GO:GO:0019088 EMBL:M13019 EMBL:M13352 EMBL:J02617
EMBL:M13347 EMBL:M13348 EMBL:M13349 EMBL:M13350 EMBL:M13351
EMBL:X14489 IPI:IPI00130734 PIR:A26323 RefSeq:NP_067263.1
UniGene:Mm.268395 PDB:3IHI PDB:4E5O PDB:4EB4 PDBsum:3IHI
PDBsum:4E5O PDBsum:4EB4 ProteinModelPortal:P07607 SMR:P07607
STRING:P07607 PhosphoSite:P07607 REPRODUCTION-2DPAGE:P07607
PaxDb:P07607 PRIDE:P07607 Ensembl:ENSMUST00000026846 GeneID:22171
KEGG:mmu:22171 InParanoid:P07607 BindingDB:P07607 ChEMBL:CHEMBL3160
EvolutionaryTrace:P07607 NextBio:302116 Bgee:P07607 CleanEx:MM_TYMS
Genevestigator:P07607 GermOnline:ENSMUSG00000025747 Uniprot:P07607
Length = 307
Score = 894 (319.8 bits), Expect = 1.4e-89, P = 1.4e-89
Identities = 163/231 (70%), Positives = 192/231 (83%)
Query: 59 QGDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPL 118
Q D + + + E QYL ++ I++ G KK DRTG GTLS+FG Q R+ L + FPL
Sbjct: 9 QSDAQQLSAEAPRHGELQYLRQVEHILRCGFKKEDRTGTGTLSVFGMQARYSLRD-EFPL 67
Query: 119 LTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGP 178
LTTKRVFWKGV+EELLWFIKGSTNAKELS KGV+IWD N +R++LDS+G R+EGDLGP
Sbjct: 68 LTTKRVFWKGVLEELLWFIKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGP 127
Query: 179 VYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALP 238
VYGFQWRH+GAEYKDM +DY+ QG+DQLQ +I+TIKTNP+DRRIIMCAWNP D+P MALP
Sbjct: 128 VYGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALP 187
Query: 239 PCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
PCH L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGLQ
Sbjct: 188 PCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQ 238
>RGD|3921 [details] [associations]
symbol:Tyms "thymidylate synthetase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IPI] [GO:0004799 "thymidylate
synthase activity" evidence=IDA] [GO:0005542 "folic acid binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;ISS] [GO:0005759
"mitochondrial matrix" evidence=ISO;ISS] [GO:0005976 "polysaccharide
metabolic process" evidence=IEP] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=IEP] [GO:0006231 "dTMP biosynthetic
process" evidence=IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0007568 "aging" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] [GO:0008144 "drug binding"
evidence=IPI] [GO:0009636 "response to toxic substance" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0019088 "immortalization of host cell by virus" evidence=IEP]
[GO:0019860 "uracil metabolic process" evidence=IEP] [GO:0031100
"organ regeneration" evidence=IEP] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0033189 "response to vitamin
A" evidence=IEP] [GO:0034097 "response to cytokine stimulus"
evidence=IEP] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=IEP] [GO:0046078 "dUMP
metabolic process" evidence=IDA] [GO:0046653 "tetrahydrofolate
metabolic process" evidence=IEP] [GO:0046683 "response to
organophosphorus" evidence=IEA;ISO] [GO:0048037 "cofactor binding"
evidence=IDA] [GO:0048589 "developmental growth" evidence=IEP]
[GO:0051216 "cartilage development" evidence=IEP] [GO:0051384
"response to glucocorticoid stimulus" evidence=IEP] [GO:0051593
"response to folic acid" evidence=IEP] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 RGD:3921 GO:GO:0042803 GO:GO:0005730
GO:GO:0005743 GO:GO:0000166 GO:GO:0042493 GO:GO:0045471 GO:GO:0005759
GO:GO:0008144 GO:GO:0009636 GO:GO:0007568 GO:GO:0031100 GO:GO:0007623
GO:GO:0034097 GO:GO:0003729 GO:GO:0051384 GO:GO:0051593 GO:GO:0048037
GO:GO:0051216 GO:GO:0032570 GO:GO:0048589 GO:GO:0046683 GO:GO:0033189
GO:GO:0046653 GO:GO:0005542 GO:GO:0005976 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP GeneTree:ENSGT00390000014786
GO:GO:0046078 GO:GO:0019088 EMBL:L12138 EMBL:BC126093 IPI:IPI00207230
PIR:S53715 RefSeq:NP_062052.1 UniGene:Rn.162284 PDB:1RTS PDB:2TSR
PDBsum:1RTS PDBsum:2TSR ProteinModelPortal:P45352 SMR:P45352
STRING:P45352 PhosphoSite:P45352 Ensembl:ENSRNOT00000056243
GeneID:29261 KEGG:rno:29261 InParanoid:P45352 SABIO-RK:P45352
BindingDB:P45352 ChEMBL:CHEMBL4341 EvolutionaryTrace:P45352
NextBio:608588 Genevestigator:P45352 GermOnline:ENSRNOG00000037225
GO:GO:0019860 Uniprot:P45352
Length = 307
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 161/219 (73%), Positives = 188/219 (85%)
Query: 71 QTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVV 130
Q E QYL ++ I++ G KK DRTG GTLS+FG Q R+ L + FPLLTTKRVFWKGV+
Sbjct: 21 QHGELQYLRQVEHIMRCGFKKEDRTGTGTLSVFGMQARYSLRD-EFPLLTTKRVFWKGVL 79
Query: 131 EELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAE 190
EELLWFIKGSTNAKELS KGV+IWD N +R++LDS+G R+EGDLGPVYGFQWRH+GA+
Sbjct: 80 EELLWFIKGSTNAKELSSKGVRIWDANGSRDFLDSLGFSARQEGDLGPVYGFQWRHFGAD 139
Query: 191 YKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVAD 250
YKDM +DY+ QG+DQLQ +I+TIKTNP+DRRIIMCAWNP D+P MALPPCH L QFYV +
Sbjct: 140 YKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPPCHALCQFYVVN 199
Query: 251 GKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGLQ
Sbjct: 200 GELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQ 238
>UNIPROTKB|F1N8Y2 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9031 "Gallus
gallus" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 EMBL:AADN02021326 IPI:IPI00592996
Ensembl:ENSGALT00000024028 Uniprot:F1N8Y2
Length = 312
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 165/238 (69%), Positives = 192/238 (80%)
Query: 52 LLPIFSPQGDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDL 111
LLP P + P + ++ E QYL + I++ GH+K DRTG GT+S+FG Q R+ L
Sbjct: 11 LLPAM-PAAEEPS---SGLEGGEPQYLQQVRHILQHGHRKEDRTGTGTISVFGMQARYSL 66
Query: 112 TNGTFPLLTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDR 171
+ FPLLTTKRVFWKGV+EELLWFIKGSTNAKELS KGVKIWD N +RE+LD G R
Sbjct: 67 RD-QFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSAKGVKIWDANGSREFLDKQGFCTR 125
Query: 172 KEGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPID 231
+EGDLGPVYGFQWRH+GA+YKDM TDY++QG+DQLQ +I IKTNP+DRRIIMCAWNP D
Sbjct: 126 EEGDLGPVYGFQWRHFGADYKDMHTDYSNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKD 185
Query: 232 MPKMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
+ MALPPCH L QFYV +G+LSCQLYQRS DMGLGVPFNIASYSLLTYMIAHVTGL+
Sbjct: 186 ISLMALPPCHALCQFYVLNGELSCQLYQRSGDMGLGVPFNIASYSLLTYMIAHVTGLK 243
>UNIPROTKB|F1MY63 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 IPI:IPI00708073 UniGene:Bt.7738
GeneTree:ENSGT00390000014786 EMBL:DAAA02056661
Ensembl:ENSBTAT00000009214 OMA:HDSIFDY Uniprot:F1MY63
Length = 354
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 157/216 (72%), Positives = 186/216 (86%)
Query: 74 EQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEEL 133
E QYL ++ I++ G ++ DRTG GTLS+FG Q R++L + FPLLTTKRVFWKGV+EEL
Sbjct: 33 ELQYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRD-EFPLLTTKRVFWKGVLEEL 91
Query: 134 LWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKD 193
LWFIKGSTNAKELS KGVKIWD N +R++LD +G DR EGDLGPVYGFQWRH+GAEYKD
Sbjct: 92 LWFIKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKD 151
Query: 194 MFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGKL 253
M ++Y+ QG+DQLQ +I+TIKTNPNDRRII+CAWNP D+P MALPPCH L QFYV +G+L
Sbjct: 152 MDSEYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGEL 211
Query: 254 SCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
SCQLYQRS DMGLGVPFNIASY+LLTYMIAH+T L+
Sbjct: 212 SCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLK 247
>UNIPROTKB|Q2TA32 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006235 "dTTP
biosynthetic process" evidence=IEA] [GO:0004799 "thymidylate
synthase activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 EMBL:BC111139 EMBL:AH009263
IPI:IPI00708073 RefSeq:NP_001032905.1 UniGene:Bt.7738 HSSP:P04818
ProteinModelPortal:Q2TA32 SMR:Q2TA32 STRING:Q2TA32 PRIDE:Q2TA32
GeneID:507631 KEGG:bta:507631 CTD:7298 HOVERGEN:HBG001934
InParanoid:Q2TA32 OrthoDB:EOG4ZKJMP NextBio:20868149 Uniprot:Q2TA32
Length = 354
Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
Identities = 157/216 (72%), Positives = 186/216 (86%)
Query: 74 EQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEEL 133
E QYL ++ I++ G ++ DRTG GTLS+FG Q R++L + FPLLTTKRVFWKGV+EEL
Sbjct: 33 ELQYLGQIEHILRCGFRRDDRTGTGTLSVFGMQARYNLRD-EFPLLTTKRVFWKGVLEEL 91
Query: 134 LWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKD 193
LWFIKGSTNAKELS KGVKIWD N +R++LD +G DR EGDLGPVYGFQWRH+GAEYKD
Sbjct: 92 LWFIKGSTNAKELSSKGVKIWDANGSRDFLDGLGFSDRAEGDLGPVYGFQWRHFGAEYKD 151
Query: 194 MFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGKL 253
M ++Y+ QG+DQLQ +I+TIKTNPNDRRII+CAWNP D+P MALPPCH L QFYV +G+L
Sbjct: 152 MDSEYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGEL 211
Query: 254 SCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
SCQLYQRS DMGLGVPFNIASY+LLTYMIAH+T L+
Sbjct: 212 SCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLK 247
>UNIPROTKB|P04818 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005976
"polysaccharide metabolic process" evidence=IEA] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008144 "drug binding" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0019088 "immortalization of host
cell by virus" evidence=IEA] [GO:0019860 "uracil metabolic process"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0034097
"response to cytokine stimulus" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IEA] [GO:0046078 "dUMP metabolic process" evidence=IEA]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=IEA]
[GO:0048037 "cofactor binding" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=IEA] [GO:0051593 "response to folic acid"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0048015 "phosphatidylinositol-mediated signaling" evidence=NAS]
[GO:0006260 "DNA replication" evidence=NAS] [GO:0006281 "DNA
repair" evidence=NAS] [GO:0046683 "response to organophosphorus"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=TAS]
[GO:0009157 "deoxyribonucleoside monophosphate biosynthetic
process" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000083 "regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0004799
"thymidylate synthase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0046134 "pyrimidine nucleoside biosynthetic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005829
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005743 GO:GO:0000166
GO:GO:0042493 GO:GO:0005759 GO:GO:0006260 GO:GO:0007568
GO:GO:0031100 GO:GO:0006206 GO:GO:0006281 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0048015
GO:GO:0046683 GO:GO:0000083 GO:GO:0005542 DrugBank:DB01101
DrugBank:DB00441 DrugBank:DB00544 DrugBank:DB00642 GO:GO:0046134
GO:GO:0006231 Orphanet:240839 Orphanet:240855 Orphanet:240955
Orphanet:240963 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235
DrugBank:DB00293 DrugBank:DB00322 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP EMBL:X02308 EMBL:D00596
EMBL:AB062290 EMBL:BC002567 EMBL:BC013919 EMBL:BC083512 EMBL:D00517
IPI:IPI00221108 PIR:A23047 RefSeq:NP_001062.1 UniGene:Hs.369762
PDB:1HVY PDB:1HW3 PDB:1HW4 PDB:1HZW PDB:1I00 PDB:1JU6 PDB:1JUJ
PDB:1YPV PDB:2ONB PDB:2RD8 PDB:2RDA PDB:3EAW PDB:3EBU PDB:3ED7
PDB:3EDW PDB:3EF9 PDB:3EGY PDB:3EHI PDB:3EJL PDB:3GG5 PDB:3GH0
PDB:3GH2 PDB:3H9K PDB:3HB8 PDB:3N5E PDB:3N5G PDB:3OB7 PDB:4E28
PDB:4GYH PDB:4H1I PDBsum:1HVY PDBsum:1HW3 PDBsum:1HW4 PDBsum:1HZW
PDBsum:1I00 PDBsum:1JU6 PDBsum:1JUJ PDBsum:1YPV PDBsum:2ONB
PDBsum:2RD8 PDBsum:2RDA PDBsum:3EAW PDBsum:3EBU PDBsum:3ED7
PDBsum:3EDW PDBsum:3EF9 PDBsum:3EGY PDBsum:3EHI PDBsum:3EJL
PDBsum:3GG5 PDBsum:3GH0 PDBsum:3GH2 PDBsum:3H9K PDBsum:3HB8
PDBsum:3N5E PDBsum:3N5G PDBsum:3OB7 PDBsum:4E28 PDBsum:4GYH
PDBsum:4H1I DisProt:DP00073 ProteinModelPortal:P04818 SMR:P04818
IntAct:P04818 STRING:P04818 PhosphoSite:P04818 DMDM:136611
PaxDb:P04818 PRIDE:P04818 DNASU:7298 Ensembl:ENST00000323274
GeneID:7298 KEGG:hsa:7298 UCSC:uc010dka.1 GeneCards:GC18P000647
HGNC:HGNC:12441 HPA:CAB002784 MIM:188350 neXtProt:NX_P04818
PharmGKB:PA359 InParanoid:P04818 PhylomeDB:P04818
BioCyc:MetaCyc:HS11096-MONOMER SABIO-RK:P04818 BindingDB:P04818
ChEMBL:CHEMBL1952 ChiTaRS:TYMS DrugBank:DB00650 DrugBank:DB00432
EvolutionaryTrace:P04818 GenomeRNAi:7298 NextBio:28543
ArrayExpress:P04818 Bgee:P04818 CleanEx:HS_TYMS
Genevestigator:P04818 GermOnline:ENSG00000176890 GO:GO:0009157
GO:GO:0046078 GO:GO:0019088 Uniprot:P04818
Length = 313
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 158/216 (73%), Positives = 185/216 (85%)
Query: 74 EQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEEL 133
E QYL + I++ G +K DRTG GTLS+FG Q R+ L + FPLLTTKRVFWKGV+EEL
Sbjct: 30 ELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRD-EFPLLTTKRVFWKGVLEEL 88
Query: 134 LWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKD 193
LWFIKGSTNAKELS KGVKIWD N +R++LDS+G R+EGDLGPVYGFQWRH+GAEY+D
Sbjct: 89 LWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRD 148
Query: 194 MFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGKL 253
M +DY+ QG+DQLQ +I+TIKTNP+DRRIIMCAWNP D+P MALPPCH L QFYV + +L
Sbjct: 149 MESDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQFYVVNSEL 208
Query: 254 SCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
SCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 209 SCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 244
>UNIPROTKB|F1PNL9 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0046683 "response to organophosphorus"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0046683
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468 OMA:HDSIFDY
Ensembl:ENSCAFT00000036918 Uniprot:F1PNL9
Length = 354
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 158/236 (66%), Positives = 188/236 (79%)
Query: 54 PIFSPQGDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTN 113
P P P E QYL ++ I+ G +K DRTG GTLS+FG Q R+ L +
Sbjct: 11 PPSPPAAQKPRARPQPPPHGELQYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRD 70
Query: 114 GTFPLLTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKE 173
FPLLTTKRVFWKGV+EELLWFIKGSTNAKELS +GVKIWD N +R++LDS+G +R+E
Sbjct: 71 -EFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREE 129
Query: 174 GDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMP 233
GDLGP+YGFQWRH+GAEYKD +DY+ QG+DQLQ +I+TIKTNP+DRRII+C WNP D+P
Sbjct: 130 GDLGPIYGFQWRHFGAEYKDKDSDYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLP 189
Query: 234 KMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
MALPPCH L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 190 LMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 245
>UNIPROTKB|F1PU23 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
EMBL:AAEX03005468 Ensembl:ENSCAFT00000029138 Uniprot:F1PU23
Length = 314
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 158/236 (66%), Positives = 188/236 (79%)
Query: 54 PIFSPQGDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTN 113
P P P E QYL ++ I+ G +K DRTG GTLS+FG Q R+ L +
Sbjct: 11 PPSPPAAQKPRARPQPPPHGELQYLRQVEHILSCGARKHDRTGTGTLSVFGMQARYSLRD 70
Query: 114 GTFPLLTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKE 173
FPLLTTKRVFWKGV+EELLWFIKGSTNAKELS +GVKIWD N +R++LDS+G +R+E
Sbjct: 71 -EFPLLTTKRVFWKGVLEELLWFIKGSTNAKELSSRGVKIWDANGSRDFLDSLGFANREE 129
Query: 174 GDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMP 233
GDLGP+YGFQWRH+GAEYKD +DY+ QG+DQLQ +I+TIKTNP+DRRII+C WNP D+P
Sbjct: 130 GDLGPIYGFQWRHFGAEYKDKDSDYSGQGVDQLQKVIDTIKTNPDDRRIILCGWNPKDLP 189
Query: 234 KMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
MALPPCH L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 190 LMALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 245
>TAIR|locus:2042649 [details] [associations]
symbol:THY-1 "thymidylate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA] [GO:0006545
"glycine biosynthetic process" evidence=IEA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009257 "10-formyltetrahydrofolate biosynthetic
process" evidence=ISS] InterPro:IPR000398 InterPro:IPR001796
InterPro:IPR012262 InterPro:IPR017925 InterPro:IPR020940
Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389 PRINTS:PR00108
PROSITE:PS00075 PROSITE:PS00091 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006730 EMBL:AC007047 GO:GO:0009257
GO:GO:0006231 EMBL:L08593 EMBL:AY063968 EMBL:AY114032
IPI:IPI00530946 PIR:E84539 RefSeq:NP_179230.1 UniGene:At.27124
ProteinModelPortal:Q05762 SMR:Q05762 IntAct:Q05762 STRING:Q05762
PaxDb:Q05762 PRIDE:Q05762 EnsemblPlants:AT2G16370.1 GeneID:816134
KEGG:ath:AT2G16370 TAIR:At2g16370 eggNOG:COG0262
HOGENOM:HOG000257901 InParanoid:Q05762 KO:K13998 OMA:NGPACEA
PhylomeDB:Q05762 ProtClustDB:CLSN2683596 Genevestigator:Q05762
GermOnline:AT2G16370 GO:GO:0004146 GO:GO:0004799 GO:GO:0006545
Gene3D:3.30.572.10 Gene3D:3.40.430.10 InterPro:IPR023451
SUPFAM:SSF53597 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 Uniprot:Q05762
Length = 519
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 153/218 (70%), Positives = 181/218 (83%)
Query: 71 QTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVV 130
Q +E YL++++ II G+ K+DRTG GTLS FG QM+F+L +FPLLTTKRVFW+GVV
Sbjct: 233 QHEEFLYLNMVEDIISNGNVKNDRTGTGTLSKFGCQMKFNLRR-SFPLLTTKRVFWRGVV 291
Query: 131 EELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAE 190
EELLWFI GSTNAK L +KG+ IWD N++REYLD IGL +R+EGDLGPVYGFQWRH+GA+
Sbjct: 292 EELLWFISGSTNAKVLQEKGIHIWDGNASREYLDGIGLTEREEGDLGPVYGFQWRHFGAK 351
Query: 191 YKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVAD 250
Y DM DYT QG DQL ++I+ IK NP+DRRIIM AWNP D+ MALPPCH AQFYVA+
Sbjct: 352 YTDMHADYTGQGFDQLVDVIDKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVAE 411
Query: 251 GKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 288
G+LSCQ+YQRSADMGLGVPFNIASYSLLT M+AHV L
Sbjct: 412 GELSCQMYQRSADMGLGVPFNIASYSLLTCMLAHVCDL 449
>FB|FBgn0024920 [details] [associations]
symbol:Ts "Ts" species:7227 "Drosophila melanogaster"
[GO:0004799 "thymidylate synthase activity" evidence=ISS;NAS]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=NAS] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 EMBL:AE014134 GO:GO:0022008 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AF073994 eggNOG:COG0207
KO:K00560 OMA:DTNVAYL RefSeq:NP_477367.1 UniGene:Dm.30804
ProteinModelPortal:O76511 SMR:O76511 DIP:DIP-20012N
MINT:MINT-326941 STRING:O76511 PaxDb:O76511 PRIDE:O76511
EnsemblMetazoa:FBtr0077679 GeneID:33499 KEGG:dme:Dmel_CG3181
CTD:33499 FlyBase:FBgn0024920 GeneTree:ENSGT00390000014786
InParanoid:O76511 OrthoDB:EOG495X7Q PhylomeDB:O76511
GenomeRNAi:33499 NextBio:783907 Bgee:O76511 GermOnline:CG3181
Uniprot:O76511
Length = 321
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 154/239 (64%), Positives = 190/239 (79%)
Query: 53 LPIFSPQGDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLT 112
+P+ + G++P + V DE YL LL II G ++ DRT VGTLS+FG+QMRFD+
Sbjct: 15 MPLPADNGESPSKQQAPVNRDEMHYLDLLRHIIANGEQRMDRTEVGTLSVFGSQMRFDMR 74
Query: 113 NGTFPLLTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRK 172
N +FPLLTTKRVF++ V EELLWF+ G T+AK L K V IWD NS+RE+LD +G R
Sbjct: 75 N-SFPLLTTKRVFFRAVAEELLWFVAGKTDAKLLQAKNVHIWDGNSSREFLDKMGFTGRA 133
Query: 173 EGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDM 232
GDLGPVYGFQWRH+GA+Y DY+ +GIDQL+ +I+TI+ NP+DRRIIM AWNP+D+
Sbjct: 134 VGDLGPVYGFQWRHFGAQYGTCDDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDI 193
Query: 233 PKMALPPCHCLAQFYVAD--GKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
PKMALPPCHCLAQFYV++ G+LSCQLYQRSADMGLGVPFNIASY+LLT+MIAHVTGL+
Sbjct: 194 PKMALPPCHCLAQFYVSEKRGELSCQLYQRSADMGLGVPFNIASYALLTHMIAHVTGLK 252
>TAIR|locus:2139544 [details] [associations]
symbol:THY-2 "thymidylate synthase 2" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006545 "glycine biosynthetic process"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009257
"10-formyltetrahydrofolate biosynthetic process" evidence=ISS]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 InterPro:IPR020940 Pfam:PF00186 Pfam:PF00303
PIRSF:PIRSF000389 PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS00091
PROSITE:PS51330 UniPathway:UPA00077 InterPro:IPR024072
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006730 EMBL:AL161585
EMBL:AL023094 GO:GO:0009257 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 KO:K13998 ProtClustDB:CLSN2683596
GO:GO:0004146 GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10
Gene3D:3.40.430.10 InterPro:IPR023451 SUPFAM:SSF53597
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 EMBL:L08594 EMBL:AK227728
EMBL:BT003159 IPI:IPI00526255 PIR:T05277 RefSeq:NP_195183.2
UniGene:At.31491 ProteinModelPortal:Q05763 SMR:Q05763 STRING:Q05763
PaxDb:Q05763 PRIDE:Q05763 EnsemblPlants:AT4G34570.1 GeneID:829609
KEGG:ath:AT4G34570 TAIR:At4g34570 InParanoid:Q05763 OMA:CEAVHLT
PhylomeDB:Q05763 Genevestigator:Q05763 GermOnline:AT4G34570
Uniprot:Q05763
Length = 565
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 152/216 (70%), Positives = 178/216 (82%)
Query: 73 DEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEE 132
+E YL+L+ +II G+ K DRTG GTLS FG QM+F+L FPLLTTKRVFW+GVVEE
Sbjct: 281 EEYLYLNLVKEIISNGNLKDDRTGTGTLSKFGCQMKFNLRRN-FPLLTTKRVFWRGVVEE 339
Query: 133 LLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYK 192
LLWFI GSTNAK L +KG++IWD N++R YLD IGL +R+EGDLGPVYGFQWRH+GA+Y
Sbjct: 340 LLWFISGSTNAKVLQEKGIRIWDGNASRAYLDGIGLTEREEGDLGPVYGFQWRHFGAKYT 399
Query: 193 DMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGK 252
DM DYT QG DQL ++IN IK NP+DRRIIM AWNP D+ MALPPCH AQFYVA+G+
Sbjct: 400 DMHADYTGQGFDQLLDVINKIKNNPDDRRIIMSAWNPSDLKLMALPPCHMFAQFYVANGE 459
Query: 253 LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 288
LSCQ+YQRSADMGLGVPFNIASYSLLT ++AHV L
Sbjct: 460 LSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDL 495
>CGD|CAL0005915 [details] [associations]
symbol:CDC21 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 CGD:CAL0005915
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0006231 DrugBank:DB01099
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
EMBL:J04230 PIR:A32805 RefSeq:XP_714908.1 RefSeq:XP_714971.1
ProteinModelPortal:P12461 SMR:P12461 STRING:P12461 GeneID:3643367
GeneID:3643463 KEGG:cal:CaO19.11033 KEGG:cal:CaO19.3549
Uniprot:P12461
Length = 315
Score = 648 (233.2 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 120/181 (66%), Positives = 140/181 (77%)
Query: 69 SVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGA-QMRFDLTNGTFPLLTTKRVFWK 127
S T EQ YL L +II G + DRTG GT SLF Q+RFDL+N TFPLLTTK+VF K
Sbjct: 4 SPNTAEQAYLDLCKRIIDEGEHRPDRTGTGTKSLFAPPQLRFDLSNDTFPLLTTKKVFSK 63
Query: 128 GVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHY 187
G++ ELLWF+ GST+AK LS+KGVKIW+ N +RE+LD +GL R+EGDLGPVYGFQWRH+
Sbjct: 64 GIIHELLWFVAGSTDAKILSEKGVKIWEGNGSREFLDKLGLTHRREGDLGPVYGFQWRHF 123
Query: 188 GAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFY 247
GAEYKD +DYT QG DQLQ++I +KTNP DRRIIM AWNP D KMALPPCH QFY
Sbjct: 124 GAEYKDCDSDYTGQGFDQLQDVIKKLKTNPYDRRIIMSAWNPPDFAKMALPPCHVFCQFY 183
Query: 248 V 248
V
Sbjct: 184 V 184
Score = 154 (59.3 bits), Expect = 7.5e-78, Sum P(2) = 7.5e-78
Identities = 32/44 (72%), Positives = 34/44 (77%)
Query: 245 QFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 288
Q A KLSC LYQRS DMGLGVPFNIASY+LLT MIAHV +
Sbjct: 198 QAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDM 241
>WB|WBGene00022455 [details] [associations]
symbol:Y110A7A.4 species:6239 "Caenorhabditis elegans"
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA;IDA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0009792
GO:GO:0010171 EMBL:FO080728 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
OMA:DTNVAYL HSSP:P04818 GeneTree:ENSGT00390000014786
RefSeq:NP_491532.3 ProteinModelPortal:Q9N588 SMR:Q9N588
STRING:Q9N588 PaxDb:Q9N588 EnsemblMetazoa:Y110A7A.4 GeneID:172149
KEGG:cel:CELE_Y110A7A.4 UCSC:Y110A7A.4 CTD:172149
WormBase:Y110A7A.4 InParanoid:Q9N588 NextBio:874229
ArrayExpress:Q9N588 Uniprot:Q9N588
Length = 312
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 137/225 (60%), Positives = 173/225 (76%)
Query: 65 QNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRV 124
Q + DE +YL +++I++ G ++ DRTG GT+S+FG Q ++ L NGT PLLTTKRV
Sbjct: 19 QQQVHLNQDEYKYLKQVEQILREGTRRDDRTGTGTISIFGMQSKYCLRNGTIPLLTTKRV 78
Query: 125 FWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQW 184
+WKGV+EELLWFI GST+ K L +K VKIW+ N R +LD++G R+EGDLGPVYGFQW
Sbjct: 79 YWKGVLEELLWFISGSTDGKLLMEKNVKIWEKNGDRAFLDNLGFTSREEGDLGPVYGFQW 138
Query: 185 RHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLA 244
RH+GA+Y D TDY+ QG+DQL +I IK P+ RRIIM AWNP D+ +M LPPCH +
Sbjct: 139 RHFGAKYVDCHTDYSGQGVDQLAEVIRQIKEQPDSRRIIMSAWNPSDLGQMVLPPCHTMC 198
Query: 245 QFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
QFYV +G+LSCQLYQRS DMGLGVPFN+ASY LLT+MIA V GL+
Sbjct: 199 QFYVDNGELSCQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLK 243
>POMBASE|SPAC15E1.04 [details] [associations]
symbol:SPAC15E1.04 "thymidylate synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004799 "thymidylate
synthase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006231 "dTMP biosynthetic process" evidence=ISS]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISM]
InterPro:IPR000398 InterPro:IPR003382 InterPro:IPR020940
Pfam:PF00303 Pfam:PF02441 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 PomBase:SPAC15E1.04 GO:GO:0005829 EMBL:CU329670
GO:GO:0050660 eggNOG:COG0452 KO:K01598 Gene3D:3.40.50.1950
SUPFAM:SSF52507 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
PIR:T37719 RefSeq:NP_594305.1 HSSP:P13100 ProteinModelPortal:Q9UTI7
SMR:Q9UTI7 STRING:Q9UTI7 EnsemblFungi:SPAC15E1.04.1 GeneID:2542801
KEGG:spo:SPAC15E1.04 OrthoDB:EOG418FX9 NextBio:20803844
Uniprot:Q9UTI7
Length = 625
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 145/240 (60%), Positives = 181/240 (75%)
Query: 58 PQGDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGA-QMRFDLTNGTF 116
P+ P + T+E+QYL+L+ I++ G + DRTG GT S+F Q+RF L N T
Sbjct: 314 PEPPVPFTSSEYRNTEEEQYLNLIRYILENGQSRPDRTGTGTRSVFAPPQLRFSLRNNTL 373
Query: 117 PLLTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDL 176
PLLTTKRVF +GV+EELLWFI G TNA LS+KG+ IWD N +RE+LDS GL DRK GDL
Sbjct: 374 PLLTTKRVFLRGVLEELLWFIHGDTNANHLSEKGIHIWDGNGSREFLDSRGLTDRKVGDL 433
Query: 177 GPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMA 236
GP+YGFQWRH+GA+Y D TDYT++G+DQL +I+T+K NP DRRII+ AWNP+ +P+MA
Sbjct: 434 GPIYGFQWRHFGAQYVDCDTDYTNKGVDQLAQVISTLKLNPYDRRIILSAWNPLAIPEMA 493
Query: 237 LPPCHCLAQFYVAD-----GK--LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
LPPCH QFYV++ GK LS +YQRSADMGLGVPFNIASYSLLT+MIAH+ G +
Sbjct: 494 LPPCHIFCQFYVSEPCKPGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMCGYE 553
>SGD|S000005600 [details] [associations]
symbol:CDC21 "Thymidylate synthase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;TAS] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 SGD:S000005600
GO:GO:0005634 EMBL:BK006948 EMBL:Z70678 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 OrthoDB:EOG418FX9 EMBL:J02706
EMBL:Z74982 EMBL:M29100 PIR:S66957 RefSeq:NP_014717.2
ProteinModelPortal:P06785 SMR:P06785 DIP:DIP-2786N IntAct:P06785
MINT:MINT-562757 STRING:P06785 PaxDb:P06785 PeptideAtlas:P06785
EnsemblFungi:YOR074C GeneID:854241 KEGG:sce:YOR074C CYGD:YOR074c
NextBio:976141 Genevestigator:P06785 Uniprot:P06785
Length = 304
Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
Identities = 143/227 (62%), Positives = 170/227 (74%)
Query: 73 DEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGA-QMRFDLTNGTFPLLTTKRVFWKGVVE 131
+E+QYL L +II G + DRTG GTLSLF Q+RF L + TFPLLTTK+VF +G++
Sbjct: 9 EEEQYLDLCKRIIDEGEFRPDRTGTGTLSLFAPPQLRFSLRDDTFPLLTTKKVFTRGIIL 68
Query: 132 ELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEY 191
ELLWF+ G T+A LS++GVKIWD N +REYLD +G DRK GDLGPVYGFQWRH+GA+Y
Sbjct: 69 ELLWFLAGDTDANLLSEQGVKIWDGNGSREYLDKMGFKDRKVGDLGPVYGFQWRHFGAKY 128
Query: 192 KDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVA-- 249
K DYT QGIDQL+ +I+ +KTNP DRRIIM AWNP D KMALPPCH +QFYV+
Sbjct: 129 KTCDDDYTGQGIDQLKQVIHKLKTNPYDRRIIMSAWNPADFDKMALPPCHIFSQFYVSFP 188
Query: 250 -----DGK--LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
GK LSC LYQRS DMGLGVPFNIASY+LLT MIA V ++
Sbjct: 189 KEGEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDME 235
>UNIPROTKB|G4MSD5 [details] [associations]
symbol:MGG_04458 "Thymidylate synthase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
EMBL:CM001232 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 RefSeq:XP_003713554.1 ProteinModelPortal:G4MSD5
SMR:G4MSD5 EnsemblFungi:MGG_04458T0 GeneID:2678156
KEGG:mgr:MGG_04458 Uniprot:G4MSD5
Length = 339
Score = 587 (211.7 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 109/194 (56%), Positives = 141/194 (72%)
Query: 60 GDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQ-MRFDLT-NGT-- 115
G P QNGT + +E QYL L+ +I+ G + DRTG GT S+F + ++F L +GT
Sbjct: 5 GAKPAQNGTE-RHEEYQYLDLVREILDNGEHRPDRTGTGTYSIFAPRPLKFSLNKDGTPI 63
Query: 116 FPLLTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGD 175
PLLTTKRVF + V+ ELLWF+ G+T+AK LSD GVKIWD N +RE+LD +GL R+ GD
Sbjct: 64 LPLLTTKRVFSRAVILELLWFVSGATSAKPLSDAGVKIWDGNGSREFLDGLGLQHREVGD 123
Query: 176 LGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKM 235
LGPVYGFQWRH+GAEY D DYT QG+DQL +++ ++TNP DRR+++ AWNP D+ M
Sbjct: 124 LGPVYGFQWRHFGAEYTDCHADYTGQGVDQLAEVVHKLRTNPYDRRMVLSAWNPKDLKLM 183
Query: 236 ALPPCHCLAQFYVA 249
LPPCH AQFYV+
Sbjct: 184 VLPPCHMFAQFYVS 197
Score = 160 (61.4 bits), Expect = 4.7e-72, Sum P(2) = 4.7e-72
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 251 GKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 288
G L CQLYQRS DMGLGVPFNIASY+LLT+MIA TGL
Sbjct: 226 GHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARATGL 263
>UNIPROTKB|Q8WYK3 [details] [associations]
symbol:TS "Thymidylate synthetase, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004799 "thymidylate synthase
activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 Pfam:PF00303
PRINTS:PR00108 GO:GO:0005737 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077208 IPI:IPI00103732 SMR:Q8WYK3 STRING:Q8WYK3
Ensembl:ENST00000323224 UCSC:uc010dkb.1 Uniprot:Q8WYK3
Length = 279
Score = 467 (169.5 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 86/124 (69%), Positives = 102/124 (82%)
Query: 74 EQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEEL 133
E QYL + I++ G +K DRTG GTLS+FG Q R+ L + FPLLTTKRVFWKGV+EEL
Sbjct: 30 ELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSLRD-EFPLLTTKRVFWKGVLEEL 88
Query: 134 LWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKD 193
LWFIKGSTNAKELS KGVKIWD N +R++LDS+G R+EGDLGPVYGFQWRH+GAEY+D
Sbjct: 89 LWFIKGSTNAKELSSKGVKIWDANGSRDFLDSLGFSTREEGDLGPVYGFQWRHFGAEYRD 148
Query: 194 MFTD 197
M +D
Sbjct: 149 MESD 152
Score = 262 (97.3 bits), Expect = 3.7e-70, Sum P(2) = 3.7e-70
Identities = 47/59 (79%), Positives = 53/59 (89%)
Query: 231 DMPKMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
D+P MALPPCH L QFYV + +LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 152 DLPLMALPPCHALCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 210
>ASPGD|ASPL0000066643 [details] [associations]
symbol:AN7028 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004799 "thymidylate synthase activity"
evidence=RCA] [GO:0008616 "queuosine biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0008479 "queuine tRNA-ribosyltransferase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR002616 InterPro:IPR004803
InterPro:IPR020940 Pfam:PF00303 Pfam:PF01702 PRINTS:PR00108
PROSITE:PS00091 EMBL:BN001304 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0008616 GO:GO:0008479 Gene3D:3.20.20.105
SUPFAM:SSF51713 TIGRFAMs:TIGR00449 TIGRFAMs:TIGR00430
EnsemblFungi:CADANIAT00000445 Uniprot:C8VB77
Length = 674
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 144/252 (57%), Positives = 173/252 (68%)
Query: 60 GDNPDQNGTSVQTDEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQ-MRFDL-----TN 113
G P + S +E QYL+L+ +I+ G + DRTG GT S+F MRF L TN
Sbjct: 352 GPQPPAHNPS--HEEHQYLNLIRQILAEGEHRPDRTGTGTRSIFAPNPMRFSLSKPSPTN 409
Query: 114 GT-----FPLLTTKRVFWKGVVEELLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGL 168
+ PLLTTKRVF + V+ ELLWFI GST++ LS+ G+KIWD N +RE+LD +GL
Sbjct: 410 PSTKIPILPLLTTKRVFLRAVLAELLWFISGSTSSIPLSEAGIKIWDGNGSREFLDKVGL 469
Query: 169 VDRKEGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWN 228
R+ GDLGPVYGFQWRH+GAEY D TDYT QG+DQL +I+ IK P DRRIIM AWN
Sbjct: 470 SHREVGDLGPVYGFQWRHFGAEYVDAHTDYTGQGVDQLADIVRKIKETPFDRRIIMSAWN 529
Query: 229 PIDMPKMALPPCHCLAQFYVA------DGK------LSCQLYQRSADMGLGVPFNIASYS 276
P D+ KMALPPCH AQ+YV+ DGK LSC LYQRS DMGLGVPFNIASY+
Sbjct: 530 PADLKKMALPPCHMFAQYYVSYPEGIEDGKGKGKGELSCLLYQRSCDMGLGVPFNIASYA 589
Query: 277 LLTYMIAHVTGL 288
LLT++IAH T L
Sbjct: 590 LLTHIIAHATDL 601
>FB|FBgn0032987 [details] [associations]
symbol:RpL21 "Ribosomal protein L21" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IDA] [GO:0005840 "ribosome"
evidence=IDA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
EMBL:AE014134 GO:GO:0051298 GO:GO:0005811 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000022 InterPro:IPR008991
SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889 OMA:TRYMFAR
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 CTD:6144
ChiTaRS:RPL21 EMBL:AY071556 EMBL:BT001760 RefSeq:NP_610144.1
UniGene:Dm.11743 SMR:Q9V9M7 IntAct:Q9V9M7 MINT:MINT-290965
STRING:Q9V9M7 EnsemblMetazoa:FBtr0085961 EnsemblMetazoa:FBtr0331295
GeneID:35453 KEGG:dme:Dmel_CG12775 UCSC:CG12775-RA
FlyBase:FBgn0032987 InParanoid:Q9V9M7 OrthoDB:EOG4B8GW8
GenomeRNAi:35453 NextBio:793594 Uniprot:Q9V9M7
Length = 159
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 124/159 (77%), Positives = 139/159 (87%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTNSKGYRRGTRD+FSRPFR+HG IPLS YM+V+K+GDIVDIKGHGAVQKG+P+K YHGK
Sbjct: 1 MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGR+FNVTQHAVGVIVNKRVR +I+ KR+NVRIEHI HSKCREDFL+RVKENE KEAK
Sbjct: 61 TGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFIA 452
EKG V+LKRQP QP+ AH V P+ LAPIPYEFIA
Sbjct: 121 EKGQWVSLKRQPEQPKKAHFVKKLEEPIALAPIPYEFIA 159
>UNIPROTKB|Q0C504 [details] [associations]
symbol:thyA "Thymidylate synthase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GO:GO:0009265 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:YP_759189.1 ProteinModelPortal:Q0C504 SMR:Q0C504
STRING:Q0C504 GeneID:4287829 KEGG:hne:HNE_0459 PATRIC:32213710
BioCyc:HNEP228405:GI69-503-MONOMER Uniprot:Q0C504
Length = 264
Score = 379 (138.5 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 73/118 (61%), Positives = 87/118 (73%)
Query: 172 KEGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPID 231
+ GDLGPVYG QWR + + IDQ+Q ++N I+TNPN RR+I+ AWNP D
Sbjct: 86 ENGDLGPVYGKQWRSWATP--------NGEAIDQIQWVLNEIRTNPNSRRLIVSAWNPAD 137
Query: 232 MPKMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
+ MALPPCHCL QF V DGKL+CQLYQRSAD+ LGVPFNIASY+LLT M+A TGLQ
Sbjct: 138 VNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIASYALLTMMMARATGLQ 195
Score = 290 (107.1 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 58/113 (51%), Positives = 76/113 (67%)
Query: 75 QQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEELL 134
QQY LL I++ GHK+ DRTGVGT+ +FG QMRFDL+ G FP++TTKR+ + ++ ELL
Sbjct: 2 QQYQALLRDILENGHKRGDRTGVGTIGVFGRQMRFDLSEG-FPMVTTKRLHLRSIIVELL 60
Query: 135 WFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHY 187
WF++G TN L + GV IWD E+ D + GDLGPVYG QWR +
Sbjct: 61 WFLRGDTNIAYLKENGVSIWD-----EWAD-------ENGDLGPVYGKQWRSW 101
>UNIPROTKB|J9NSP4 [details] [associations]
symbol:J9NSP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OMA:NVSKHAL GeneTree:ENSGT00390000001293
EMBL:AAEX03007872 Ensembl:ENSCAFT00000037808 Uniprot:J9NSP4
Length = 160
Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
Identities = 113/160 (70%), Positives = 134/160 (83%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVD+KG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDVKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + R P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNRKEPELLEPIPYEFMA 160
>UNIPROTKB|F1NP85 [details] [associations]
symbol:RPL21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
GO:GO:0006412 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AADN02005176 IPI:IPI00598409
Ensembl:ENSGALT00000030100 Uniprot:F1NP85
Length = 163
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 116/164 (70%), Positives = 138/164 (84%)
Query: 291 TSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDY 350
++ MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQ+GMP K Y
Sbjct: 1 SAKMTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQQGMPHKCY 60
Query: 351 HGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRK 410
HGKTGRV+NVTQHAVGVIVNK+V+ +I+ KRINVRIEHIKHSK R+ FL+RVKENE K+K
Sbjct: 61 HGKTGRVYNVTQHAVGVIVNKKVKGKILAKRINVRIEHIKHSKSRDSFLQRVKENEKKKK 120
Query: 411 EAKEKGIKVNLKRQPAQPRPAHIV--SGRTAPVMLAPIPYEFIA 452
EAKEKGI V LKRQPA PR AH V +G+ P +L PIPYEF+A
Sbjct: 121 EAKEKGIWVQLKRQPAPPREAHFVRTNGKD-PELLEPIPYEFMA 163
>RGD|2321753 [details] [associations]
symbol:LOC100360604 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2321753
RGD:68390 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH474012
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889
OMA:TRYMFAR PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
HOVERGEN:HBG001518 UniGene:Rn.129926 UniGene:Rn.156707
UniGene:Rn.201357 UniGene:Rn.203267 UniGene:Rn.83200 EMBL:BC058459
EMBL:BC086441 IPI:IPI00565398 RefSeq:XP_002728035.1
RefSeq:XP_002730236.1 RefSeq:XP_003752673.1 RefSeq:XP_003754779.1
SMR:Q6PDW2 STRING:Q6PDW2 Ensembl:ENSRNOT00000001265
Ensembl:ENSRNOT00000040249 Ensembl:ENSRNOT00000046791
Ensembl:ENSRNOT00000047936 GeneID:100361811 GeneID:100362550
KEGG:rno:100361811 KEGG:rno:100362550 UCSC:RGD:2321753
InParanoid:Q6PDW2 NextBio:717396 Genevestigator:Q6PDW2
Uniprot:Q6PDW2
Length = 160
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 114/160 (71%), Positives = 133/160 (83%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|Q6PDW2 [details] [associations]
symbol:LOC100360604 "RCG42727, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2321753
RGD:68390 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH474012
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889
OMA:TRYMFAR PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
HOVERGEN:HBG001518 UniGene:Rn.129926 UniGene:Rn.156707
UniGene:Rn.201357 UniGene:Rn.203267 UniGene:Rn.83200 EMBL:BC058459
EMBL:BC086441 IPI:IPI00565398 RefSeq:XP_002728035.1
RefSeq:XP_002730236.1 RefSeq:XP_003752673.1 RefSeq:XP_003754779.1
SMR:Q6PDW2 STRING:Q6PDW2 Ensembl:ENSRNOT00000001265
Ensembl:ENSRNOT00000040249 Ensembl:ENSRNOT00000046791
Ensembl:ENSRNOT00000047936 GeneID:100361811 GeneID:100362550
KEGG:rno:100361811 KEGG:rno:100362550 UCSC:RGD:2321753
InParanoid:Q6PDW2 NextBio:717396 Genevestigator:Q6PDW2
Uniprot:Q6PDW2
Length = 160
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 114/160 (71%), Positives = 133/160 (83%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|P46778 [details] [associations]
symbol:RPL21 "60S ribosomal protein L21" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 Orphanet:55654 GO:GO:0006415 GO:GO:0006414
InterPro:IPR008991 SUPFAM:SSF50104 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG2139 KO:K02889
OMA:TRYMFAR PANTHER:PTHR20981 EMBL:X89401 EMBL:U14967 EMBL:AB061826
EMBL:BC001603 EMBL:BC007505 EMBL:BC062981 EMBL:BC070184
EMBL:BC070323 EMBL:BC070330 EMBL:U25789 EMBL:L38826 EMBL:AB007176
IPI:IPI00247583 PIR:S55913 RefSeq:NP_000973.2 UniGene:Hs.381123
UniGene:Hs.535873 ProteinModelPortal:P46778 SMR:P46778
IntAct:P46778 STRING:P46778 PhosphoSite:P46778 DMDM:1172991
SWISS-2DPAGE:P46778 PaxDb:P46778 PRIDE:P46778
Ensembl:ENST00000272274 Ensembl:ENST00000311549
Ensembl:ENST00000319826 Ensembl:ENST00000326092 GeneID:6144
KEGG:hsa:6144 UCSC:uc001uqz.1 CTD:6144 GeneCards:GC13P027827
H-InvDB:HIX0096689 HGNC:HGNC:10313 HPA:HPA047252 MIM:603636
neXtProt:NX_P46778 PharmGKB:PA34683 HOVERGEN:HBG001518
InParanoid:P46778 OrthoDB:EOG4K6G5D PhylomeDB:P46778 ChiTaRS:RPL21
GenomeRNAi:6144 NextBio:23871 ArrayExpress:P46778 Bgee:P46778
CleanEx:HS_RPL21 Genevestigator:P46778 GermOnline:ENSG00000122026
Uniprot:P46778
Length = 160
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 113/160 (70%), Positives = 133/160 (83%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|F1RTJ9 [details] [associations]
symbol:RPL21 "60S ribosomal protein L21" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
GO:GO:0006412 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:CU695218 RefSeq:XP_003482912.1
RefSeq:XP_003482913.1 RefSeq:XP_003482914.1 RefSeq:XP_003482915.1
ProteinModelPortal:F1RTJ9 SMR:F1RTJ9 PRIDE:F1RTJ9
Ensembl:ENSSSCT00000010191 GeneID:100736809 KEGG:ssc:100736809
Uniprot:F1RTJ9
Length = 160
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 113/160 (70%), Positives = 133/160 (83%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|Q861S4 [details] [associations]
symbol:RPL21 "Similar to ribosomal protein L21"
species:9913 "Bos taurus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG2139 HOGENOM:HOG000194513 KO:K02889 OMA:TRYMFAR
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 CTD:6144
HOVERGEN:HBG001518 OrthoDB:EOG4K6G5D EMBL:DAAA02033166
EMBL:AB098887 EMBL:AB099050 EMBL:AB099075 IPI:IPI00715868
RefSeq:NP_001178341.1 UniGene:Bt.5211 STRING:Q861S4
Ensembl:ENSBTAT00000002160 GeneID:326584 KEGG:bta:326584
InParanoid:Q861S4 NextBio:20809657 Uniprot:Q861S4
Length = 160
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 113/160 (70%), Positives = 133/160 (83%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++Y+ GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>ZFIN|ZDB-GENE-030131-8512 [details] [associations]
symbol:rpl21 "ribosomal protein L21" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
ZFIN:ZDB-GENE-030131-8512 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 CTD:6144 HOVERGEN:HBG001518
OrthoDB:EOG4K6G5D EMBL:AL929009 EMBL:BC071354 IPI:IPI00502862
RefSeq:NP_001002155.1 UniGene:Dr.75923 SMR:Q6IQQ0 STRING:Q6IQQ0
Ensembl:ENSDART00000002595 GeneID:336568 KEGG:dre:336568
InParanoid:Q6IQQ0 NextBio:20811808 Uniprot:Q6IQQ0
Length = 160
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 111/160 (69%), Positives = 134/160 (83%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN++G RRGTR +F+RPFR+HG IPLS YM++YK GDIVDIKG G +QKGMP K YHGK
Sbjct: 1 MTNTRGKRRGTRYMFARPFRKHGPIPLSTYMRIYKKGDIVDIKGTGTIQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FL+RVKENE K+ EAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLQRVKENEKKKVEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRT-APVMLAPIPYEFIA 452
++G + LKRQPA PRPAH VS + P +L PIPYEF+A
Sbjct: 121 KEGTWIELKRQPAAPRPAHFVSTKNNKPQLLEPIPYEFMA 160
>UNIPROTKB|J9NXT7 [details] [associations]
symbol:LOC478864 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OMA:GVIVYKV
EMBL:AAEX03016746 RefSeq:XP_003434068.1 Ensembl:ENSCAFT00000013992
GeneID:607788 KEGG:cfa:607788 Uniprot:J9NXT7
Length = 160
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 112/160 (70%), Positives = 132/160 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+N TQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNDTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|J9P4T5 [details] [associations]
symbol:LOC100855701 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OMA:NDAARHE
EMBL:AAEX03007831 Ensembl:ENSCAFT00000037820 Uniprot:J9P4T5
Length = 160
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 113/160 (70%), Positives = 132/160 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRGSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVLLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>RGD|1583496 [details] [associations]
symbol:LOC681195 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1583496 RGD:2324079 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:GVIVYKV OrthoDB:EOG4K6G5D
IPI:IPI00475747 RefSeq:XP_002727833.1 RefSeq:XP_003752410.1
Ensembl:ENSRNOT00000048373 GeneID:100362779 KEGG:rno:100362779
UCSC:RGD:1583496 Uniprot:D3ZZH9
Length = 160
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 113/160 (70%), Positives = 132/160 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM +YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMLIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINV+IEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVQIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>RGD|2321582 [details] [associations]
symbol:LOC100364176 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:2321582 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981 OMA:NVSKHAL
OrthoDB:EOG4K6G5D IPI:IPI00400601 RefSeq:XP_002727250.1
RefSeq:XP_002730079.1 Ensembl:ENSRNOT00000049571 GeneID:100360604
KEGG:rno:100360604 Uniprot:D3ZPN7
Length = 160
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 113/160 (70%), Positives = 132/160 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
T RV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TRRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>RGD|2324079 [details] [associations]
symbol:LOC100362779 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:1583496
RGD:2324079 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:GVIVYKV OrthoDB:EOG4K6G5D
IPI:IPI00475747 RefSeq:XP_002727833.1 RefSeq:XP_003752410.1
Ensembl:ENSRNOT00000048373 GeneID:100362779 KEGG:rno:100362779
UCSC:RGD:1583496 Uniprot:D3ZZH9
Length = 160
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 113/160 (70%), Positives = 132/160 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM +YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMLIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINV+IEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVQIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>RGD|2320757 [details] [associations]
symbol:LOC100361103 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2320757
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
OrthoDB:EOG4K6G5D OMA:RIERIKH IPI:IPI00400550 RefSeq:XP_002726520.1
RefSeq:XP_002729483.1 Ensembl:ENSRNOT00000042619 GeneID:100361103
KEGG:rno:100361103 UCSC:RGD:2320757 Uniprot:D3Z9G3
Length = 160
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 112/160 (70%), Positives = 132/160 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GD+VDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDVVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIE IKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIERIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|F1PWM2 [details] [associations]
symbol:RPL21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
OMA:TRYMFAR PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
EMBL:AAEX03014245 Ensembl:ENSCAFT00000010959 Uniprot:F1PWM2
Length = 162
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 113/162 (69%), Positives = 133/162 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGT--IPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYH 351
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YH
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGAGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYH 60
Query: 352 GKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKE 411
GKTGRV+NVTQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KE
Sbjct: 61 GKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKE 120
Query: 412 AKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
AKEKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 AKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 162
>RGD|68390 [details] [associations]
symbol:Rpl21 "ribosomal protein L21" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 RGD:68390 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 CTD:6144
HOVERGEN:HBG001518 OrthoDB:EOG4K6G5D EMBL:M27905 EMBL:X15216
IPI:IPI00421720 PIR:A33295 RefSeq:NP_445782.1 UniGene:Rn.129926
UniGene:Rn.156707 UniGene:Rn.201357 UniGene:Rn.203267
UniGene:Rn.83200 ProteinModelPortal:P20280 SMR:P20280 STRING:P20280
PRIDE:P20280 GeneID:79449 KEGG:rno:79449 InParanoid:P20280
NextBio:614816 ArrayExpress:P20280 Genevestigator:P20280
GermOnline:ENSRNOG00000000957 GermOnline:ENSRNOG00000029410
GermOnline:ENSRNOG00000032803 GermOnline:ENSRNOG00000034135
Uniprot:P20280
Length = 160
Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
Identities = 112/160 (70%), Positives = 131/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V L QPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>MGI|MGI:1278340 [details] [associations]
symbol:Rpl21 "ribosomal protein L21" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 MGI:MGI:1278340
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 eggNOG:COG2139 HOGENOM:HOG000194513
PANTHER:PTHR20981 HOVERGEN:HBG001518 OrthoDB:EOG4K6G5D EMBL:U93863
IPI:IPI00555045 UniGene:Mm.316592 UniGene:Mm.371575
UniGene:Mm.440507 ProteinModelPortal:O09167 SMR:O09167
STRING:O09167 PhosphoSite:O09167 PaxDb:O09167 PRIDE:O09167
InParanoid:O09167 CleanEx:MM_RPL21 Genevestigator:O09167
GermOnline:ENSMUSG00000041453 GermOnline:ENSMUSG00000066443
GermOnline:ENSMUSG00000068014 GermOnline:ENSMUSG00000068397
GermOnline:ENSMUSG00000072901 Uniprot:O09167
Length = 160
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 112/160 (70%), Positives = 131/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKR A PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>TIGR_CMR|CBU_1547 [details] [associations]
symbol:CBU_1547 "thymidylate synthase" species:227377
"Coxiella burnetii RSA 493" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_820530.1 ProteinModelPortal:Q83BG2 SMR:Q83BG2
GeneID:1209457 KEGG:cbu:CBU_1547 PATRIC:17931857
BioCyc:CBUR227377:GJ7S-1527-MONOMER Uniprot:Q83BG2
Length = 264
Score = 330 (121.2 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 68/118 (57%), Positives = 84/118 (71%)
Query: 172 KEGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPID 231
+ GDLGP+YG QWR + D T +DQ+Q +I IKTNP+ RR+I+ AWN +
Sbjct: 86 ENGDLGPIYGKQWRRWHCP--DGRT------VDQMQRLIREIKTNPDSRRLIVSAWNVGE 137
Query: 232 MPKMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
+ +MALPPCH L QFYVADG LSC+L QRSAD LGVPFNIASYSLLT++IA L+
Sbjct: 138 LDQMALPPCHLLFQFYVADGFLSCKLTQRSADAFLGVPFNIASYSLLTHLIARQCNLK 195
Score = 269 (99.8 bits), Expect = 1.8e-56, Sum P(2) = 1.8e-56
Identities = 55/113 (48%), Positives = 76/113 (67%)
Query: 75 QQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEELL 134
++YL+ L I+ G K+DRTG+GT S+FG +MRF+L G FPL+TTK++ K V+ ELL
Sbjct: 2 KEYLNFLQFILDHGVAKTDRTGIGTKSVFGYEMRFNLREG-FPLVTTKKIHLKSVIYELL 60
Query: 135 WFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHY 187
WF++G TN + L+D GV IWD E+ D + GDLGP+YG QWR +
Sbjct: 61 WFLRGDTNIQFLNDNGVTIWD-----EWAD-------ENGDLGPIYGKQWRRW 101
>UNIPROTKB|G5E6D6 [details] [associations]
symbol:G5E6D6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OMA:NVSKHAL GeneTree:ENSGT00390000001293 EMBL:DAAA02070079
Ensembl:ENSBTAT00000052276 NextBio:20926471 Uniprot:G5E6D6
Length = 160
Score = 580 (209.2 bits), Expect = 2.5e-56, P = 2.5e-56
Identities = 110/160 (68%), Positives = 132/160 (82%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG R+GT +FSRPFR+HG +PL+ YM++Y+ GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRQGTCYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV++VTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYSVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|J9NVK8 [details] [associations]
symbol:J9NVK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 EMBL:AAEX03015332
Ensembl:ENSCAFT00000025360 OMA:NGKEHEL Uniprot:J9NVK8
Length = 160
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 109/160 (68%), Positives = 129/160 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT +FSRP+R+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTHYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG++VNK+V+ +I+ KRINV IEHIKHSK R+ FLK VKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVHIEHIKHSKSRDSFLKHVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LK QPA PR AH V + P +L PIPYEFIA
Sbjct: 121 EKGTWVQLKHQPAPPREAHFVRTNGKEPELLEPIPYEFIA 160
>RGD|1562601 [details] [associations]
symbol:RGD1562601 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1562601 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00208158
RefSeq:XP_001064745.1 RefSeq:XP_212810.1 PRIDE:D3ZLH3
Ensembl:ENSRNOT00000048420 GeneID:291308 KEGG:rno:291308 CTD:291308
NextBio:632372 Uniprot:D3ZLH3
Length = 160
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 112/160 (70%), Positives = 130/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG IPL+ YM++YK GDIVDIKG G VQK MP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVIPLATYMRIYKKGDIVDIKGMGTVQKRMPHKYYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDGFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQP PR AH V + P +L PI YEF+A
Sbjct: 121 EKGTWVQLKRQPVPPREAHFVRTNGKEPELLEPILYEFMA 160
>RGD|1562923 [details] [associations]
symbol:RGD1562923 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562923 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00196172
RefSeq:XP_001070972.1 RefSeq:XP_212786.1 PRIDE:D3ZEK2
Ensembl:ENSRNOT00000058595 GeneID:290825 KEGG:rno:290825
UCSC:RGD:1562923 CTD:290825 NextBio:631721 Uniprot:D3ZEK2
Length = 160
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 110/160 (68%), Positives = 130/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKYYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQH+VG+IVNK+V+ +I+ KRINVRIEHIKH K R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHSVGIIVNKQVKGKILAKRINVRIEHIKHLKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L P PY F+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPGLLEPSPYGFMA 160
>UNIPROTKB|F1N7U3 [details] [associations]
symbol:Bt.86815 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:GVIVYKV EMBL:DAAA02053574
IPI:IPI00903844 Ensembl:ENSBTAT00000036093 NextBio:20871445
Uniprot:F1N7U3
Length = 160
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 108/160 (67%), Positives = 131/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT +FSRPFR+HG +PL+ YM++Y+ GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTCYMFSRPFRKHGVVPLATYMRIYRKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRV+E++ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVEEDDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LK QPA PR AH V + P +L PIPYEF+A
Sbjct: 121 EKGTWVQLKHQPAPPREAHFVRTNGKEPELLEPIPYEFMA 160
>UNIPROTKB|P67044 [details] [associations]
symbol:thyA "Thymidylate synthase" species:1773
"Mycobacterium tuberculosis" [GO:0004799 "thymidylate synthase
activity" evidence=IDA] [GO:0006231 "dTMP biosynthetic process"
evidence=IDA] [GO:0046079 "dUMP catabolic process" evidence=IDA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GO:GO:0046079 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL ProtClustDB:PRK01827 PIR:C70881 RefSeq:NP_217280.1
RefSeq:NP_337339.1 RefSeq:YP_006516209.1 PDB:3QJ7 PDBsum:3QJ7
ProteinModelPortal:P67044 SMR:P67044 PRIDE:P67044
EnsemblBacteria:EBMYCT00000000138 EnsemblBacteria:EBMYCT00000070853
GeneID:13319492 GeneID:887728 GeneID:925453 KEGG:mtc:MT2834
KEGG:mtu:Rv2764c KEGG:mtv:RVBD_2764c PATRIC:18127984
TubercuList:Rv2764c BioCyc:MetaCyc:MONOMER-15786 BindingDB:P67044
ChEMBL:CHEMBL1795162 Uniprot:P67044
Length = 263
Score = 333 (122.3 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 64/115 (55%), Positives = 85/115 (73%)
Query: 174 GDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMP 233
G+LGP+YG QWR + A + + IDQ+ ++ ++T+P+ RRII+ AWN ++
Sbjct: 88 GELGPIYGVQWRSWPAP--------SGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIE 139
Query: 234 KMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 288
+MALPPCH QFYVADG+LSCQLYQRSAD+ LGVPFNIASY+LLT+M+A GL
Sbjct: 140 RMALPPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGL 194
Score = 258 (95.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 57/113 (50%), Positives = 72/113 (63%)
Query: 77 YLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEELLWF 136
Y LL +++TG KSDRTG GT SLFG QMR+DL+ G FPLLTTK+V +K V ELLWF
Sbjct: 4 YEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAG-FPLLTTKKVHFKSVAYELLWF 62
Query: 137 IKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGA 189
++G +N L + GV IWD E+ G +LGP+YG QWR + A
Sbjct: 63 LRGDSNIGWLHEHGVTIWD-----EWASDTG-------ELGPIYGVQWRSWPA 103
>RGD|2321746 [details] [associations]
symbol:LOC100360611 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:2321746 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00361465
RefSeq:XP_002724809.1 RefSeq:XP_002727949.1
Ensembl:ENSRNOT00000051772 GeneID:100360611 KEGG:rno:100360611
UCSC:RGD:2321746 Uniprot:D4A7B4
Length = 160
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 109/160 (68%), Positives = 130/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK DIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKDDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
T RV+NVTQHAVG+IVNK+V+ +I+ KRINVRIE+IKHSK R+ FL RVKEN+ K+KEAK
Sbjct: 61 TRRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEYIKHSKSRDSFLNRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L P+PYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPMPYEFMA 160
>RGD|1562839 [details] [associations]
symbol:RGD1562839 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562839 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00213243 RefSeq:XP_001073633.1
RefSeq:XP_213130.1 PRIDE:D3ZMI8 Ensembl:ENSRNOT00000048115
GeneID:300731 KEGG:rno:300731 UCSC:RGD:1562839 CTD:300731
NextBio:647396 Uniprot:D3ZMI8
Length = 160
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 109/160 (68%), Positives = 130/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVR EHIKH K R+ FLKRVKEN+ K++EAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRTEHIKHWKSRDSFLKRVKENDQKKEEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGR-TAPVMLAPIPYEFIA 452
EKG V LKRQPA R AH V + P +L PIP++FIA
Sbjct: 121 EKGTWVQLKRQPAPRREAHFVRTKGKEPELLEPIPFKFIA 160
>RGD|1561815 [details] [associations]
symbol:RGD1561815 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1561815 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00210546 RefSeq:XP_001076371.1
RefSeq:XP_212947.1 PRIDE:D4A4G9 Ensembl:ENSRNOT00000050384
GeneID:295472 KEGG:rno:295472 UCSC:RGD:1561815 CTD:295472
NextBio:639640 Uniprot:D4A4G9
Length = 160
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 110/160 (68%), Positives = 128/160 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTWYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I KRINV EHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKIPAKRINVWFEHIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L P PYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPSPYEFMA 160
>RGD|1565370 [details] [associations]
symbol:RGD1565370 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1565370 RGD:2320219 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00389130
RefSeq:XP_212922.1 Ensembl:ENSRNOT00000041479 GeneID:294700
KEGG:rno:294700 UCSC:RGD:1565370 CTD:294700 NextBio:638437
Uniprot:D3ZPH0
Length = 160
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 110/160 (68%), Positives = 127/160 (79%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RR TR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHA G+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K KEAK
Sbjct: 61 TGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P L P PY F+A
Sbjct: 121 EKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA 160
>RGD|2320219 [details] [associations]
symbol:LOC100364846 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:1565370
RGD:2320219 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00389130
RefSeq:XP_212922.1 Ensembl:ENSRNOT00000041479 GeneID:294700
KEGG:rno:294700 UCSC:RGD:1565370 CTD:294700 NextBio:638437
Uniprot:D3ZPH0
Length = 160
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 110/160 (68%), Positives = 127/160 (79%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RR TR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHA G+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K KEAK
Sbjct: 61 TGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P L P PY F+A
Sbjct: 121 EKGTWVPLKRQPAPPREAHFVRTNGKEPERLEPSPYGFMA 160
>RGD|1566270 [details] [associations]
symbol:RGD1566270 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1566270 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00362290
RefSeq:XP_001060499.1 RefSeq:XP_212974.1 Ensembl:ENSRNOT00000048356
GeneID:296502 KEGG:rno:296502 UCSC:RGD:1566270 CTD:296502
NextBio:641302 Uniprot:D4A4G7
Length = 160
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 107/160 (66%), Positives = 131/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT+ +FSRPFR+HG +PL+ Y+++YK G +VDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTQYMFSRPFRKHGVVPLATYLRIYKKGGMVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAV +IVNK+V+ +I+ KRINVRIE+IKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVDIIVNKQVKGKILAKRINVRIEYIKHSKSRDSFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L P+PYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPMPYEFMA 160
>TIGR_CMR|BA_2236 [details] [associations]
symbol:BA_2236 "thymidylate synthase" species:198094
"Bacillus anthracis str. Ames" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 RefSeq:NP_844627.1
RefSeq:YP_018881.1 RefSeq:YP_028345.1 ProteinModelPortal:Q81R23
SMR:Q81R23 DNASU:1085458 EnsemblBacteria:EBBACT00000013190
EnsemblBacteria:EBBACT00000017828 EnsemblBacteria:EBBACT00000020667
GeneID:1085458 GeneID:2814626 GeneID:2850789 KEGG:ban:BA_2236
KEGG:bar:GBAA_2236 KEGG:bat:BAS2082 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
BioCyc:BANT260799:GJAJ-2150-MONOMER
BioCyc:BANT261594:GJ7F-2225-MONOMER Uniprot:Q81R23
Length = 318
Score = 355 (130.0 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 70/118 (59%), Positives = 85/118 (72%)
Query: 172 KEGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPID 231
K G LG VYG QWR + + +DQL+++I IK P+ RR+I+ AWNP D
Sbjct: 140 KYGYLGDVYGKQWRAWKTT--------AGETLDQLKDVIEMIKKTPDSRRLIVSAWNPED 191
Query: 232 MPKMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
+P MALPPCH L QFYVADGKLSCQLYQRS D+ LG+PFNIASYSLLT++IAH GL+
Sbjct: 192 VPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLE 249
Score = 229 (85.7 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 46/92 (50%), Positives = 64/92 (69%)
Query: 74 EQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEEL 133
E +YL+L +++ G KK DRTG GT+S+FG QMRFDL+ G FPLLTTKRV ++ V EL
Sbjct: 5 ENEYLNLCRHVMEHGTKKEDRTGTGTVSVFGYQMRFDLSKG-FPLLTTKRVPFRLVASEL 63
Query: 134 LWFIKGSTNAKELSDKGVKIWDPNSTREYLDS 165
LWF+KG TN + L IW+ + + +++S
Sbjct: 64 LWFMKGDTNIRYLLQHNNNIWNEWAFKSWVES 95
>RGD|1562469 [details] [associations]
symbol:RGD1562469 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562469 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00369443 RefSeq:XP_001054778.1
PRIDE:D3ZXP5 Ensembl:ENSRNOT00000044723 GeneID:366689
KEGG:rno:366689 UCSC:RGD:1562469 CTD:366689 NextBio:689861
Uniprot:D3ZXP5
Length = 160
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 109/160 (68%), Positives = 128/160 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM+ YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRTYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINV IEHIKHSK R+ FLKRVKEN+ +KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKRVKENDQNKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQ A PR A V + P +L P+PYEF+A
Sbjct: 121 EKGTWVQLKRQSASPREAQFVRTNGKEPELLEPMPYEFMA 160
>RGD|1565159 [details] [associations]
symbol:RGD1565159 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1565159 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00209623 RefSeq:XP_001053261.1
RefSeq:XP_227091.1 Ensembl:ENSRNOT00000049363 GeneID:310365
KEGG:rno:310365 CTD:310365 NextBio:661903 Uniprot:D4A219
Length = 160
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 107/160 (66%), Positives = 130/160 (81%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M N+KG RRGT+ + SRPFR+HG +PL+ YM++YK GDIVDIKG G VQKG+P K YHGK
Sbjct: 1 MRNTKGKRRGTQYMSSRPFRKHGVVPLATYMQIYKKGDIVDIKGMGTVQKGIPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVGV+VNK+V+ +I+ KRINVR EHIKHSK R+ FLKRVK+N+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGVMVNKQVKGKILAKRINVRTEHIKHSKSRDSFLKRVKDNDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L P+PYEF+A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPMPYEFMA 160
>RGD|1589437 [details] [associations]
symbol:LOC680639 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1589437 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00391774
RefSeq:XP_003749224.1 RefSeq:XP_003753561.1
Ensembl:ENSRNOT00000048123 GeneID:100909610 KEGG:rno:100909610
Uniprot:D3ZPU6
Length = 160
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 109/160 (68%), Positives = 127/160 (79%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RR TR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
RV+NVTQHA G+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLKRVKEN+ K KEAK
Sbjct: 61 NIRVYNVTQHAEGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKEKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L P PYEF+A
Sbjct: 121 EKGTWVPLKRQPASPREAHFVRTNGKEPELLEPSPYEFMA 160
>RGD|1566326 [details] [associations]
symbol:RGD1566326 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1566326 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00206537 RefSeq:XP_001078943.1
RefSeq:XP_212960.1 Ensembl:ENSRNOT00000051901 GeneID:295941
KEGG:rno:295941 UCSC:RGD:1566326 CTD:295941 NextBio:640359
Uniprot:D3ZE97
Length = 160
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 110/160 (68%), Positives = 126/160 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+ G IPL+ YM++YK GDIVDIKG G VQKGMP Y GK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKPGVIPLATYMRIYKKGDIVDIKGIGTVQKGMPHNCYQGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRIN R EHIKHSK R+ FLKRVKEN K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINGRTEHIKHSKSRDSFLKRVKENNQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKGI V LKRQP PR AH V + P +L P PYEFIA
Sbjct: 121 EKGIWVQLKRQPVPPREAHFVRTNGKEPELLEPSPYEFIA 160
>RGD|1560414 [details] [associations]
symbol:RGD1560414 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1560414 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00361993
Ensembl:ENSRNOT00000054860 Uniprot:D3ZRA9
Length = 155
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 108/155 (69%), Positives = 124/155 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT +FSRPFR+HG IPL+ YM++YK GDIVDIKG G QKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTWSMFSRPFRKHGVIPLATYMRIYKKGDIVDIKGMGTFQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINV IEHIKHSK R+ FLKRVKEN K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKRVKENNQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIP 447
EKG V LKRQPA PR AH V + P +L PIP
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIP 155
>RGD|1564552 [details] [associations]
symbol:RGD1564552 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1564552 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00361923 RefSeq:XP_001068883.1
RefSeq:XP_212816.1 Ensembl:ENSRNOT00000050803 GeneID:291367
KEGG:rno:291367 UCSC:RGD:1564552 CTD:291367 NextBio:632502
Uniprot:D3ZIM9
Length = 160
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 107/160 (66%), Positives = 128/160 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ +M++YK GD+VDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRCMFSRPFRKHGVVPLATHMRIYKKGDVVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV NVTQHAVG+IVNK+V+ +I+ KRINVRIEHI+HSK R+ FLK VKEN+ K++EAK
Sbjct: 61 TGRVCNVTQHAVGIIVNKQVKGKILAKRINVRIEHIEHSKSRDSFLKWVKENDQKKEEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L PIPY A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYGLTA 160
>RGD|1561875 [details] [associations]
symbol:RGD1561875 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1561875 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00205553 RefSeq:XP_001075345.1
RefSeq:XP_212946.1 Ensembl:ENSRNOT00000050291 GeneID:295439
KEGG:rno:295439 CTD:295439 NextBio:639565 Uniprot:D3ZHP4
Length = 160
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 108/160 (67%), Positives = 125/160 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR HG IPL+ Y+++YK GDIVDIKG G QKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIKGMGTAQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGR +NVTQHAVG+IVNK+V+ +I KRINVRIEH KHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRAYNVTQHAVGIIVNKQVKGKIPAKRINVRIEHTKHSKSRDGFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQP PR AH V + P +L PYEF+A
Sbjct: 121 EKGTWVQLKRQPVPPREAHFVRTNGKEPELLERSPYEFMA 160
>UNIPROTKB|F1LWH4 [details] [associations]
symbol:F1LWH4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 IPI:IPI00390548
Ensembl:ENSRNOT00000049138 Uniprot:F1LWH4
Length = 160
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 106/160 (66%), Positives = 128/160 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
+TN+KG RRGTR +FSRPFR+HG +PL+ YM +YK GDIVDIKG G VQKG+P K YHGK
Sbjct: 1 ITNTKGKRRGTRYMFSRPFRKHGVVPLATYMGIYKKGDIVDIKGMGTVQKGIPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
T RV+NVTQHAVG+IVNK+V+ + + KRINVRIEHIKHSK R+ FLK+VKEN+ K+KEAK
Sbjct: 61 TERVYNVTQHAVGIIVNKQVKGKFLVKRINVRIEHIKHSKSRDSFLKQVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P ++ PIPY +A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELMEPIPYGAMA 160
>UNIPROTKB|F1MUN0 [details] [associations]
symbol:F1MUN0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:DAAA02032091 EMBL:DAAA02032092
IPI:IPI00722898 PRIDE:F1MUN0 Ensembl:ENSBTAT00000001088
NextBio:20898920 Uniprot:F1MUN0
Length = 159
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 108/160 (67%), Positives = 128/160 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSR FR+HG +PL+ YM++YK GDIV IKG VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRTFRKHGGVPLATYMRIYK-GDIVGIKGMVTVQKGMPHKCYHGK 59
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRI+HIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 60 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIKHIKHSKSRDSFLKRVKENDQKKKEAK 119
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V KRQP PR AH V + P +L PIPYEF+A
Sbjct: 120 EKGTWVKPKRQPVPPREAHFVRTNGKEPELLEPIPYEFMA 159
>RGD|2322974 [details] [associations]
symbol:LOC100363471 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2322974
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00196783
PRIDE:D3ZUH0 Ensembl:ENSRNOT00000052088 UCSC:RGD:2322974
Uniprot:D3ZUH0
Length = 160
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 106/160 (66%), Positives = 128/160 (80%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP + YHGK
Sbjct: 1 MTNTKGKRRGTWYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHECYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TG+V+NVTQHAVG+IVNK+V+ +I+ KRI+V IEHIKHSK R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGKVYNVTQHAVGIIVNKQVKGKILAKRISVWIEHIKHSKSRDGFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR AH V + P +L P PY +A
Sbjct: 121 EKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPSPYGLMA 160
>RGD|1586616 [details] [associations]
symbol:LOC686080 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1586616 RGD:1597962
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
OrthoDB:EOG4K6G5D IPI:IPI00764351 PRIDE:D4A870
Ensembl:ENSRNOT00000045446 Uniprot:D4A870
Length = 160
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 106/160 (66%), Positives = 126/160 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPQKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ K INVRIEHIK SK R+ FL RVKEN+ K++EAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKMINVRIEHIKQSKSRDSFLNRVKENDQKKEEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LK QPA PR AH V + P +L P PY +A
Sbjct: 121 EKGTWVQLKCQPAPPREAHFVRTNGKEPELLEPSPYGLMA 160
>RGD|1597962 [details] [associations]
symbol:LOC682512 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1586616 RGD:1597962
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
OrthoDB:EOG4K6G5D IPI:IPI00764351 PRIDE:D4A870
Ensembl:ENSRNOT00000045446 Uniprot:D4A870
Length = 160
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 106/160 (66%), Positives = 126/160 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPQKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ K INVRIEHIK SK R+ FL RVKEN+ K++EAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKMINVRIEHIKQSKSRDSFLNRVKENDQKKEEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LK QPA PR AH V + P +L P PY +A
Sbjct: 121 EKGTWVQLKCQPAPPREAHFVRTNGKEPELLEPSPYGLMA 160
>RGD|1562929 [details] [associations]
symbol:RGD1562929 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562929 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00363559 RefSeq:XP_001055652.1
RefSeq:XP_237550.1 PRIDE:D3ZPV5 Ensembl:ENSRNOT00000056321
GeneID:316745 KEGG:rno:316745 UCSC:RGD:1562929 CTD:316745
NextBio:671209 Uniprot:D3ZPV5
Length = 160
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 104/159 (65%), Positives = 125/159 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++ K GDIVDIKG G V+KGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIRKKGDIVDIKGMGTVEKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVN++V+ +I+ KRINV+IEHIKH R FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNEQVKGKILAKRINVQIEHIKHPNSRNGFLKRVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFI 451
E G V LKRQP PR AH V + P +L PIP EF+
Sbjct: 121 ENGTWVQLKRQPVPPREAHFVKTNGKEPELLEPIPQEFM 159
>RGD|2318391 [details] [associations]
symbol:LOC100365794 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:2318391 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00568610 PRIDE:F1LV39 Ensembl:ENSRNOT00000044093
Uniprot:F1LV39
Length = 160
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 106/160 (66%), Positives = 128/160 (80%)
Query: 295 TNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKT 354
TN+KG RRGTR +FSRPFR+HG +PL+ +M+ YK GDIVDIKG G VQK MP K YHGKT
Sbjct: 2 TNTKGKRRGTRYMFSRPFRKHGVVPLATHMQTYKKGDIVDIKGMGTVQKRMPLKCYHGKT 61
Query: 355 GRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKE 414
G+V NVTQHA G+IVNK+V+ +I+ KRINVR EHIKHSK R+ FLKRVKEN+ K KEAKE
Sbjct: 62 GKVCNVTQHAAGIIVNKQVKGKILAKRINVRTEHIKHSKSRDGFLKRVKENDQKEKEAKE 121
Query: 415 KGIKVNLKRQPAQPRPAHIV--SGRTAPVMLAPIPYEFIA 452
KG V LKRQPA PR AH V +G+ + +L P+PY+F+A
Sbjct: 122 KGTWVPLKRQPAPPREAHFVRTNGKESE-LLEPMPYKFMA 160
>RGD|1562971 [details] [associations]
symbol:RGD1562971 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562971 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00368302 Ensembl:ENSRNOT00000047249
UCSC:RGD:1562971 NextBio:688282 Uniprot:D3ZEP1
Length = 157
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 106/160 (66%), Positives = 126/160 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M N+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MMNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAVG+IVNK+V+ +I+ KRINVRIEHIK+ R+ FLKRVKEN+ K+KEAK
Sbjct: 61 TGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKN---RDSFLKRVKENDQKKKEAK 117
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQPA PR A V + P +L P PY +A
Sbjct: 118 EKGTWVQLKRQPAPPREALFVRTNGKEPELLDPTPYGLMA 157
>RGD|1561957 [details] [associations]
symbol:RGD1561957 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1561957 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00368433 Ensembl:ENSRNOT00000040493 UCSC:RGD:1561957
NextBio:659603 Uniprot:D3ZKL4
Length = 160
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 103/160 (64%), Positives = 125/160 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT+ +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGM K YHGK
Sbjct: 1 MTNTKGKRRGTQYMFSRPFRKHGVVPLTTYMQIYKKGDIVDIKGMGTVQKGMSHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
T RV+NVTQHA+G+IVNK+V+ +I+ KRINVRIEHIKHSK R+ FLK+VKEN+ K KEAK
Sbjct: 61 TRRVYNVTQHALGIIVNKQVKGKIMAKRINVRIEHIKHSKSRDGFLKQVKENDQKPKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGR-TAPVMLAPIPYEFIA 452
E+G V LK QP PR AH V + P +L IPY +A
Sbjct: 121 EEGTWVQLKLQPEPPREAHFVRTKGKEPELLESIPYGLMA 160
>RGD|1559531 [details] [associations]
symbol:RGD1559531 "similar to 60S ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1559531 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00388220 Ensembl:ENSRNOT00000048673 UCSC:RGD:1559531
NextBio:633440 Uniprot:D3ZQ96
Length = 155
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 101/155 (65%), Positives = 121/155 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+K RRGTR +FSRPFR+HG +PL YM++YK GDIVDIKG GA QKGM K YHGK
Sbjct: 1 MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
T RV+NVTQHAVG+IVNK+V+ +I+ KRINV IEHIKHSK R+ FLK+VKEN+ K++EAK
Sbjct: 61 TVRVYNVTQHAVGIIVNKQVKGKILAKRINVWIEHIKHSKSRDSFLKQVKENDQKKEEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIP 447
EKG V L QPA PR AH V + P +L P+P
Sbjct: 121 EKGTWVQLSLQPAPPREAHFVRTNGKEPELLEPVP 155
>UNIPROTKB|F1PL86 [details] [associations]
symbol:F1PL86 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03010901
Ensembl:ENSCAFT00000002445 OMA:RISVWIE Uniprot:F1PL86
Length = 156
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 99/159 (62%), Positives = 122/159 (76%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSR HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSR----HGVVPLATYMRIYKKGDIVDIKGMGVVQKGMPHKCYHGK 56
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
+GRV+N TQHAVG++VNK+V+ +I+ KRINV +HIKHSK ++ FLK VKEN+ K+KEAK
Sbjct: 57 SGRVYNFTQHAVGIVVNKQVKGKILAKRINVHTKHIKHSKSQDSFLKHVKENDQKKKEAK 116
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFI 451
E+G V LK QPA PR AH V + P +L PIPY F+
Sbjct: 117 EEGTWVQLKCQPAPPREAHFVRTNGKEPELLEPIPYGFM 155
>SGD|S000000395 [details] [associations]
symbol:RPL21A "Ribosomal 60S subunit protein L21A"
species:4932 "Saccharomyces cerevisiae" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
SGD:S000000395 EMBL:BK006936 GO:GO:0003735 GO:GO:0002181
EMBL:Z21487 PDB:4B6A PDBsum:4B6A InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 EMBL:U02073 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58
PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS
PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
EMBL:M86408 EMBL:Z36059 PIR:S28921 RefSeq:NP_009750.1
ProteinModelPortal:Q02753 SMR:Q02753 IntAct:Q02753
MINT:MINT-1324156 STRING:Q02753 PeptideAtlas:Q02753 PRIDE:Q02753
EnsemblFungi:YBR191W GeneID:852489 KEGG:sce:YBR191W CYGD:YBR191w
GeneTree:ENSGT00390000001293 OMA:GVIVYKV EvolutionaryTrace:Q02753
NextBio:971474 Genevestigator:Q02753 GermOnline:YBR191W
Uniprot:Q02753
Length = 160
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 99/160 (61%), Positives = 121/160 (75%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M S GYR TR +F R FR+HG + LS Y+KVYKVGDIVDIK +G++QKGMP K Y GK
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TG V+NVT+ +VGVI+NK V R + KR+N+R+EHIKHSKCR++FL+RVK N KR EAK
Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGR-TAPVMLAPIPYE-FI 451
+G+ V LKRQPAQPR + IVS P LAP+PYE FI
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYETFI 160
>RGD|1564634 [details] [associations]
symbol:RGD1564634 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1564634 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 IPI:IPI00957983
Ensembl:ENSRNOT00000046324 Uniprot:F1LY43
Length = 154
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 96/153 (62%), Positives = 119/153 (77%)
Query: 301 RRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNV 360
RRGT+ +FSRPFR+HG +PL+ YM++YK GDIVDIKG G+VQKGMP K YH KTGRV+NV
Sbjct: 2 RRGTQYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGSVQKGMPHKCYHSKTGRVYNV 61
Query: 361 TQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVN 420
TQH VG+IVNK+++ + + KRINVR EHIKHSK R+ FLKRVKE + ++KEAKEKG V
Sbjct: 62 TQHDVGIIVNKQIKGKTLAKRINVRTEHIKHSKSRDSFLKRVKEKDQEKKEAKEKGTWVQ 121
Query: 421 LKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
K QPA PR A V + P +L IPY+F+A
Sbjct: 122 PKHQPAPPREAQFVRTNGKEPELLETIPYKFMA 154
>SGD|S000006000 [details] [associations]
symbol:RPL21B "Ribosomal 60S subunit protein L21B"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 SGD:S000006000 EMBL:BK006949
GO:GO:0003735 GO:GO:0002181 EMBL:U41849 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 eggNOG:COG2139 HOGENOM:HOG000194513
KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
GeneTree:ENSGT00390000001293 PIR:S61108 RefSeq:NP_015246.1
ProteinModelPortal:Q12672 SMR:Q12672 IntAct:Q12672 STRING:Q12672
PaxDb:Q12672 PeptideAtlas:Q12672 EnsemblFungi:YPL079W GeneID:856026
KEGG:sce:YPL079W CYGD:YPL079w OMA:KQVRNRI NextBio:980941
Genevestigator:Q12672 GermOnline:YPL079W Uniprot:Q12672
Length = 160
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 97/160 (60%), Positives = 121/160 (75%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M S GYR TR +F R FR+HG + +S Y+K+YKVGDIVDIK +G++QKGMP K Y GK
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TG V+NVT+ +VGVI+NK V R + KR+N+R+EHIKHSKCR++FL+RVK N KR EAK
Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGR-TAPVMLAPIPYE-FI 451
+G+ V LKRQPAQPR + IVS P LAP+PYE FI
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYETFI 160
>WB|WBGene00004433 [details] [associations]
symbol:rpl-21 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 EMBL:FO080531 eggNOG:COG2139 HOGENOM:HOG000194513
KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 PIR:S44757 RefSeq:NP_498774.1
ProteinModelPortal:P34334 SMR:P34334 DIP:DIP-24597N IntAct:P34334
MINT:MINT-1072893 STRING:P34334 PaxDb:P34334
EnsemblMetazoa:C14B9.7.1 EnsemblMetazoa:C14B9.7.2 GeneID:176146
KEGG:cel:CELE_C14B9.7 UCSC:C14B9.7.2 CTD:176146 WormBase:C14B9.7
InParanoid:P34334 NextBio:891328 Uniprot:P34334
Length = 161
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 102/161 (63%), Positives = 120/161 (74%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTNSKG RRGTR +F+R FR+HG LS Y YK GD+VDIK +GA QKGMPFK YHG+
Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGR 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGR+FNVT+ AVG+IVNKRVR I+PKRIN+RIEHIK SKCR DFL RVK N+ KRK AK
Sbjct: 61 TGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAK 120
Query: 414 EKGIKVN-LKRQPAQPRPAHIVSGRT-APVMLAPIPYEFIA 452
G V LKR P PR AH V+ + P +LAP+ +E +A
Sbjct: 121 SAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIVA 161
>UNIPROTKB|Q8WYK4 [details] [associations]
symbol:TS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077207 IPI:IPI00103733 SMR:Q8WYK4 STRING:Q8WYK4
Ensembl:ENST00000323250 UCSC:uc010dkc.1 H-InvDB:HIX0021150
Uniprot:Q8WYK4
Length = 230
Score = 418 (152.2 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 74/103 (71%), Positives = 88/103 (85%)
Query: 187 YGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQF 246
+G + + DY+ QG+DQLQ +I+TIKTNP+DRRIIMCAWNP D+P MALPPCH L QF
Sbjct: 59 FGMQARYSLRDYSGQGVDQLQRVIDTIKTNPDDRRIIMCAWNPRDLPLMALPPCHALCQF 118
Query: 247 YVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
YV + +LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 119 YVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 161
Score = 102 (41.0 bits), Expect = 3.7e-48, Sum P(2) = 3.7e-48
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 74 EQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDL 111
E QYL + I++ G +K DRTG GTLS+FG Q R+ L
Sbjct: 30 ELQYLGQIQHILRCGVRKDDRTGTGTLSVFGMQARYSL 67
>UNIPROTKB|D4A9T8 [details] [associations]
symbol:D4A9T8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00205341
Ensembl:ENSRNOT00000021161 Uniprot:D4A9T8
Length = 161
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 101/161 (62%), Positives = 120/161 (74%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRG+ L SRPF HG +PL+ YM++YK GDI+DIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGSWCLLSRPFSNHGVVPLATYMQIYKKGDIIDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGR-VFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEA 412
T +NVTQ+AVG+IVNK+V+ +I+ KRINVRIEHIK+ K R+ FLK VKEN+ K+KEA
Sbjct: 61 TEESTYNVTQYAVGIIVNKQVKGKILAKRINVRIEHIKNLKSRDSFLKWVKENDQKKKEA 120
Query: 413 KEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
KEKG V LKRQPA P AH V + R LAPI Y F A
Sbjct: 121 KEKGTWVQLKRQPAPPSEAHFVRTNRKESERLAPIQYRFTA 161
>UNIPROTKB|F1MSB9 [details] [associations]
symbol:F1MSB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 Pfam:PF01157
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
EMBL:DAAA02028569 IPI:IPI00842185 PRIDE:F1MSB9
Ensembl:ENSBTAT00000019522 NextBio:20899973 Uniprot:F1MSB9
Length = 160
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 97/160 (60%), Positives = 122/160 (76%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MT++KG RRGT ++ SR FR+HG +PL+ Y+ +YK GDIVDIKG G VQ GMP K YHGK
Sbjct: 1 MTDTKGTRRGTCNMSSRSFRKHGIVPLATYVIIYKEGDIVDIKGMGTVQNGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
T RV+NVTQHAVG+IVNK+V+ +I+ KRINV IEHIKHSK ++ FLK VKEN+ K+KEAK
Sbjct: 61 TVRVYNVTQHAVGIIVNKQVKGKILAKRINVHIEHIKHSKSQDSFLKHVKENDQKKKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPV-MLAPIPYEFIA 452
EK V LKRQPA PR A+ + ++ P PY+F+A
Sbjct: 121 EKETWVQLKRQPAPPREAYFMRTNEKEFEVMEPNPYQFMA 160
>UNIPROTKB|D4A4U4 [details] [associations]
symbol:D4A4U4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00557251 Ensembl:ENSRNOT00000012902 Uniprot:D4A4U4
Length = 155
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 101/160 (63%), Positives = 122/160 (76%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSR FR+HG +PL+ Y+++YK GDIVDIKG G VQKG+P K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRSFRKHGVVPLATYIRIYKKGDIVDIKGMGTVQKGIPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NV QHAV +IVNK+V+ +I+ KRINVRI+HI+HSK R+ FLKRVKENE EAK
Sbjct: 61 TGRVYNV-QHAVRIIVNKQVKGKILAKRINVRIDHIRHSKSRDSFLKRVKENE----EAK 115
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGR-TAPVMLAPIPYEFIA 452
EKG V KRQPA PR AH V P + + YEF+A
Sbjct: 116 EKGTWVQPKRQPAPPREAHFVRNNGKEPELREIMLYEFMA 155
>ASPGD|ASPL0000075029 [details] [associations]
symbol:AN4802 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BN001303
EMBL:AACD01000081 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
OMA:GVIVYKV RefSeq:XP_662406.1 ProteinModelPortal:Q5B3S8 SMR:Q5B3S8
STRING:Q5B3S8 EnsemblFungi:CADANIAT00005619 GeneID:2872596
KEGG:ani:AN4802.2 Uniprot:Q5B3S8
Length = 158
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 98/156 (62%), Positives = 121/156 (77%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M +S G R GTR FSR FR G I LS Y+K Y+VGDIVDIK +GAVQKGMP+K Y+GK
Sbjct: 1 MGHSHGLRSGTRYAFSRNFREKGQIRLSTYLKTYRVGDIVDIKVNGAVQKGMPYKVYNGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TG V+NVT+ +VGV++ K V R + KRINVRIEH+KHS+ REDF+KRVKEN K+K+AK
Sbjct: 61 TGVVYNVTKSSVGVLLYKVVGNRYLEKRINVRIEHVKHSRSREDFIKRVKENAEKKKQAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYE 449
E+GI ++LKRQPAQPR AH V G T P + P+PY+
Sbjct: 121 EQGIHLHLKRQPAQPREAHTVEGST-PETITPLPYD 155
>TAIR|locus:2049389 [details] [associations]
symbol:AT2G21550 species:3702 "Arabidopsis thaliana"
[GO:0004146 "dihydrofolate reductase activity" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0006545 "glycine
biosynthetic process" evidence=IEA] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000041 "transition metal ion transport"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389
PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006730 GO:GO:0046654 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 ProtClustDB:CLSN2683596 GO:GO:0004146
GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10 Gene3D:3.40.430.10
InterPro:IPR023451 SUPFAM:SSF53597 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:AC007119 HSSP:P13100 IPI:IPI00533060
PIR:F84602 RefSeq:NP_179750.1 UniGene:At.50088
ProteinModelPortal:Q9SIK4 SMR:Q9SIK4 STRING:Q9SIK4
EnsemblPlants:AT2G21550.1 GeneID:816694 KEGG:ath:AT2G21550
TAIR:At2g21550 InParanoid:Q9SIK4 OMA:CHNIAID PhylomeDB:Q9SIK4
ArrayExpress:Q9SIK4 Genevestigator:Q9SIK4 Uniprot:Q9SIK4
Length = 492
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 103/217 (47%), Positives = 140/217 (64%)
Query: 73 DEQQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEE 132
+E YL+L+ II +G D TLS FG QMRF+L TFPLLTTK++FW GVVEE
Sbjct: 234 EEFGYLNLVQNIISSG----DMNDNSTLSKFGCQMRFNLRK-TFPLLTTKKIFWLGVVEE 288
Query: 133 LLWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGL-VDRKEGDLGPVYGFQWRHYGAEY 191
+L I GS N KE G IWD + +EYLDS G+ ++GD ++G W+H A +
Sbjct: 289 ILQLISGSNNPKE---NGSHIWDTDEAKEYLDSFGVNATEEDGDNPFLHGLHWKHCDARF 345
Query: 192 KDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADG 251
Q QL ++IN IK NP+D+RI++ A NP+D K+++ PCH QFYVA+G
Sbjct: 346 -------VIQEFSQLSDVINKIKNNPHDQRIMLAACNPLDF-KLSVSPCHTFTQFYVANG 397
Query: 252 KLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 288
++SCQ+YQ S + +G+PF+IA+YSLLT +IAHV L
Sbjct: 398 EVSCQIYQSSTEASIGIPFSIATYSLLTCIIAHVCDL 434
>POMBASE|SPAC959.08 [details] [associations]
symbol:rpl2102 "60S ribosomal protein L21 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 PomBase:SPAC959.08
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
EMBL:AB010901 PIR:T43320 RefSeq:NP_594175.1
ProteinModelPortal:O42706 SMR:O42706 STRING:O42706 PRIDE:O42706
EnsemblFungi:SPAC959.08.1 GeneID:2543337 KEGG:spo:SPAC959.08
OMA:HVDVKVN NextBio:20804353 Uniprot:O42706
Length = 160
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 98/157 (62%), Positives = 113/157 (71%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M +S G R TR F R FR HG I LS Y+K YKVGDIVDIK +GAVQKGMP K YHGK
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TG V+NVTQ +VGV++ K V R + KR+NVRIEH+KHSKCR+DFL RVK NE KRKEAK
Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRT-APVMLAPIPYE 449
+G V L+RQPA P AH VS PV L P+ Y+
Sbjct: 121 AQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>POMBASE|SPBC365.03c [details] [associations]
symbol:rpl2101 "60S ribosomal protein L21 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 PomBase:SPBC365.03c
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
PIR:T40310 RefSeq:NP_596032.1 ProteinModelPortal:Q9UUC1 SMR:Q9UUC1
STRING:Q9UUC1 EnsemblFungi:SPBC365.03c.1 GeneID:2540950
KEGG:spo:SPBC365.03c OrthoDB:EOG412QFT NextBio:20802065
Uniprot:Q9UUC1
Length = 160
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 98/157 (62%), Positives = 113/157 (71%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M +S G R TR F R FR HG I LS Y+K YKVGDIVDIK +GAVQKGMP K YHGK
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TG V+NVTQ +VGV++ K V R + KR+NVRIEH+KHSKCR+DFL RVK NE KRKEAK
Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRT-APVMLAPIPYE 449
+G V L+RQPA P AH VS PV L P+ Y+
Sbjct: 121 AQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RGD|1594606 [details] [associations]
symbol:LOC691874 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1594606 RGD:1595537
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00387693
Ensembl:ENSRNOT00000030924 Uniprot:D3ZPB0
Length = 159
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 92/160 (57%), Positives = 117/160 (73%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTI-PLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHG 352
M N+KG RRGTR +FSRP R+ G + PL+ M++++ D+VD KG G VQKGM + H
Sbjct: 1 MMNTKGERRGTRYMFSRPLRKRGVVVPLAANMRIHR-RDVVDTKGMGTVQKGMLPRVTHS 59
Query: 353 KTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEA 412
KT RV++VTQ AVG+IVNK+V+ +I+ KRI+VRIEHI+HS R+ FLKRVKEN+ K++EA
Sbjct: 60 KTARVYSVTQQAVGIIVNKQVKGKILAKRISVRIEHIRHSMSRDGFLKRVKENDQKKEEA 119
Query: 413 KEKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFIA 452
KEKG V LKRQPA PR A V P +L PIPY F A
Sbjct: 120 KEKGTWVQLKRQPAPPREAPFVRTGKEPELLGPIPYGFTA 159
>RGD|1595537 [details] [associations]
symbol:LOC678883 "hypothetical protein LOC678883" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:1594606 RGD:1595537 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00387693 Ensembl:ENSRNOT00000030924
Uniprot:D3ZPB0
Length = 159
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 92/160 (57%), Positives = 117/160 (73%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTI-PLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHG 352
M N+KG RRGTR +FSRP R+ G + PL+ M++++ D+VD KG G VQKGM + H
Sbjct: 1 MMNTKGERRGTRYMFSRPLRKRGVVVPLAANMRIHR-RDVVDTKGMGTVQKGMLPRVTHS 59
Query: 353 KTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEA 412
KT RV++VTQ AVG+IVNK+V+ +I+ KRI+VRIEHI+HS R+ FLKRVKEN+ K++EA
Sbjct: 60 KTARVYSVTQQAVGIIVNKQVKGKILAKRISVRIEHIRHSMSRDGFLKRVKENDQKKEEA 119
Query: 413 KEKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFIA 452
KEKG V LKRQPA PR A V P +L PIPY F A
Sbjct: 120 KEKGTWVQLKRQPAPPREAPFVRTGKEPELLGPIPYGFTA 159
>UNIPROTKB|E1BM31 [details] [associations]
symbol:E1BM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:DAAA02062634 IPI:IPI00702461
Ensembl:ENSBTAT00000014565 OMA:KENDQKQ Uniprot:E1BM31
Length = 139
Score = 249 (92.7 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 51/80 (63%), Positives = 60/80 (75%)
Query: 374 RTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVNLKRQPAQPRPAHI 433
+T I+ KRINV IEHIKHSK ++ FLK VKEN+ K+KEAKEKG V LKRQPA PR AH
Sbjct: 60 KTGILAKRINVHIEHIKHSKSQDSFLKCVKENDQKQKEAKEKGTWVQLKRQPAPPREAHF 119
Query: 434 V-SGRTAPVMLAPIPYEFIA 452
V + P +L P+PYEFIA
Sbjct: 120 VKTNGKEPKLLEPVPYEFIA 139
Score = 223 (83.6 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 41/62 (66%), Positives = 48/62 (77%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RR T +F R R+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRDTPYMFPRSLRKHGVVPLATYMQIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TG 355
TG
Sbjct: 61 TG 62
>TAIR|locus:2206480 [details] [associations]
symbol:AT1G57660 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 EMBL:AC079733
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:AC079732 GO:GO:0022625
eggNOG:COG2139 HOGENOM:HOG000194513 KO:K02889 ProtClustDB:PLN00190
PANTHER:PTHR20981 EMBL:AY050840 EMBL:AY091167 EMBL:BT004794
EMBL:AY086851 EMBL:F20014 IPI:IPI00525678 PIR:H96610
RefSeq:NP_564724.1 RefSeq:NP_564726.1 UniGene:At.21612
UniGene:At.48314 UniGene:At.67877 ProteinModelPortal:Q9FDZ9
SMR:Q9FDZ9 STRING:Q9FDZ9 PRIDE:Q9FDZ9 EnsemblPlants:AT1G57660.1
EnsemblPlants:AT1G57860.1 GeneID:842142 GeneID:842161
KEGG:ath:AT1G57660 KEGG:ath:AT1G57860 GeneFarm:251 TAIR:At1g57660
TAIR:At1g57860 InParanoid:Q9FDZ9 OMA:NVSKHAL PhylomeDB:Q9FDZ9
Genevestigator:Q9FDZ9 GermOnline:AT1G57660 Uniprot:Q9FDZ9
Length = 164
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 81/158 (51%), Positives = 114/158 (72%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K +GA+ KGMP K YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGR++NVT+ AVGV VNK++ RII KRI+VR+EH++ S+C E+F R K+N++ + +AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFI 451
+G ++ KRQP P+P +V G T + PIPY+ +
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETV-TPIPYDVV 157
>TAIR|locus:2009410 [details] [associations]
symbol:AT1G57860 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 EMBL:AC079733
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:AC079732 GO:GO:0022625
eggNOG:COG2139 HOGENOM:HOG000194513 KO:K02889 ProtClustDB:PLN00190
PANTHER:PTHR20981 EMBL:AY050840 EMBL:AY091167 EMBL:BT004794
EMBL:AY086851 EMBL:F20014 IPI:IPI00525678 PIR:H96610
RefSeq:NP_564724.1 RefSeq:NP_564726.1 UniGene:At.21612
UniGene:At.48314 UniGene:At.67877 ProteinModelPortal:Q9FDZ9
SMR:Q9FDZ9 STRING:Q9FDZ9 PRIDE:Q9FDZ9 EnsemblPlants:AT1G57660.1
EnsemblPlants:AT1G57860.1 GeneID:842142 GeneID:842161
KEGG:ath:AT1G57660 KEGG:ath:AT1G57860 GeneFarm:251 TAIR:At1g57660
TAIR:At1g57860 InParanoid:Q9FDZ9 OMA:NVSKHAL PhylomeDB:Q9FDZ9
Genevestigator:Q9FDZ9 GermOnline:AT1G57660 Uniprot:Q9FDZ9
Length = 164
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 81/158 (51%), Positives = 114/158 (72%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K +GA+ KGMP K YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGR++NVT+ AVGV VNK++ RII KRI+VR+EH++ S+C E+F R K+N++ + +AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFI 451
+G ++ KRQP P+P +V G T + PIPY+ +
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETV-TPIPYDVV 157
>TAIR|locus:2012275 [details] [associations]
symbol:AT1G09590 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0005730 GO:GO:0006412
EMBL:AC003970 GO:GO:0003735 EMBL:AC000132 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 EMBL:AF370227 EMBL:AY059119
EMBL:BT000775 EMBL:AY059923 EMBL:AY081656 IPI:IPI00530029
PIR:G86230 RefSeq:NP_563847.1 RefSeq:NP_563849.1 UniGene:At.23363
UniGene:At.42214 ProteinModelPortal:Q43291 SMR:Q43291 STRING:Q43291
PRIDE:Q43291 EnsemblPlants:AT1G09590.1 EnsemblPlants:AT1G09690.1
GeneID:837486 GeneID:837497 KEGG:ath:AT1G09590 KEGG:ath:AT1G09690
GeneFarm:250 TAIR:At1g09590 TAIR:At1g09690 eggNOG:COG2139
HOGENOM:HOG000194513 InParanoid:Q43291 KO:K02889 OMA:TRYMFAR
PhylomeDB:Q43291 ProtClustDB:PLN00190 Genevestigator:Q43291
GermOnline:AT1G09590 PANTHER:PTHR20981 Uniprot:Q43291
Length = 164
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 81/158 (51%), Positives = 111/158 (70%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K +GA+ KGMP K YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGR++NVT+ AVGV VNK++ RII KRI+VR+EH++ S+C E+F R K+N+ + AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFI 451
G ++ KRQP P+P +V G T + PIPY+ +
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETV-TPIPYDVV 157
>TAIR|locus:2024387 [details] [associations]
symbol:AT1G09690 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0005730 GO:GO:0006412
EMBL:AC003970 GO:GO:0003735 EMBL:AC000132 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 EMBL:AF370227 EMBL:AY059119
EMBL:BT000775 EMBL:AY059923 EMBL:AY081656 IPI:IPI00530029
PIR:G86230 RefSeq:NP_563847.1 RefSeq:NP_563849.1 UniGene:At.23363
UniGene:At.42214 ProteinModelPortal:Q43291 SMR:Q43291 STRING:Q43291
PRIDE:Q43291 EnsemblPlants:AT1G09590.1 EnsemblPlants:AT1G09690.1
GeneID:837486 GeneID:837497 KEGG:ath:AT1G09590 KEGG:ath:AT1G09690
GeneFarm:250 TAIR:At1g09590 TAIR:At1g09690 eggNOG:COG2139
HOGENOM:HOG000194513 InParanoid:Q43291 KO:K02889 OMA:TRYMFAR
PhylomeDB:Q43291 ProtClustDB:PLN00190 Genevestigator:Q43291
GermOnline:AT1G09590 PANTHER:PTHR20981 Uniprot:Q43291
Length = 164
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 81/158 (51%), Positives = 111/158 (70%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K +GA+ KGMP K YHG+
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGR++NVT+ AVGV VNK++ RII KRI+VR+EH++ S+C E+F R K+N+ + AK
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFI 451
G ++ KRQP P+P +V G T + PIPY+ +
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETV-TPIPYDVV 157
>RGD|1565713 [details] [associations]
symbol:RGD1565713 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1565713 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00564035 Ensembl:ENSRNOT00000048255 UCSC:RGD:1565713
NextBio:630806 Uniprot:D3ZM68
Length = 157
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 90/160 (56%), Positives = 113/160 (70%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+K RR TR + SR RHG +PLS M ++K GDIVDIKG AVQKG K YHGK
Sbjct: 1 MTNTKERRRVTRSMLSR---RHGVVPLSTCMGIHKKGDIVDIKGMVAVQKGTTPKCYHGK 57
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
GRV +VTQHA+G+IVN +V+ +++ KRI+VRIE IK + R+ FLK+V+EN+ K+KEAK
Sbjct: 58 PGRVCSVTQHAMGIIVNTQVKGKLLAKRISVRIEQIKQLRSRDGFLKQVQENDQKKKEAK 117
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V LKRQP PR H V + P + PIPY F+A
Sbjct: 118 EKGTWVPLKRQPVPPREVHFVRTNGKEPELREPIPYGFMA 157
>UNIPROTKB|F1M081 [details] [associations]
symbol:F1M081 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00949634 Ensembl:ENSRNOT00000048828 Uniprot:F1M081
Length = 142
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 86/143 (60%), Positives = 104/143 (72%)
Query: 307 LFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNVTQHAVG 366
+F+ F HG +P + YM +YK DIVDIKG G+VQKGMP K YH KTGRV++VTQHA+G
Sbjct: 2 IFASKFNSHGVVPSATYM-LYKKSDIVDIKGTGSVQKGMPHKCYHSKTGRVYDVTQHAMG 60
Query: 367 VIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVNLKRQPA 426
+IVNK+V+ +I+ KRINV IEHIKH R+ FLK+VKEN K KEAKEKG V LK QPA
Sbjct: 61 IIVNKQVKGKILAKRINVWIEHIKHES-RDSFLKQVKENGQKEKEAKEKGSWVQLKHQPA 119
Query: 427 QPRPAHIVSGR-TAPVMLAPIPY 448
PR AH V + P +L PI Y
Sbjct: 120 PPREAHFVRTKGKEPELLEPISY 142
>UNIPROTKB|F1M1P0 [details] [associations]
symbol:F1M1P0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 IPI:IPI00564025
Ensembl:ENSRNOT00000051232 Uniprot:F1M1P0
Length = 160
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 84/155 (54%), Positives = 110/155 (70%)
Query: 301 RRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNV 360
RRGTR +FSRPFR+HG +PL+ YM++Y G++VDIK G VQKG P K YHGKTGRV +V
Sbjct: 6 RRGTRYMFSRPFRKHGVVPLAAYMRIYNKGNVVDIKVMGTVQKGTPHKCYHGKTGRVCSV 65
Query: 361 TQHAVGVIVNKRVRTRIIPKRINVRIEHIKHS--KCREDFLKRVKENELKRKEAKEKGIK 418
TQ AV +IVNK+++ +I+ KR NVR EH + + + R FLKRV+E + K++EAKEKG
Sbjct: 66 TQDAVAIIVNKQIKGKILAKRTNVRTEHTQQALEEPRVSFLKRVREKDQKKEEAKEKGAW 125
Query: 419 VNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
V LK QP R AH V + P + P+PY F+A
Sbjct: 126 VQLKHQPVPRREAHSVRTNGKEPELREPMPYGFMA 160
>UNIPROTKB|I3LB48 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9823 "Sus
scrofa" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634 GO:GO:0005743
GO:GO:0005759 GO:GO:0046683 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
Ensembl:ENSSSCT00000031689 OMA:RINDFKA Uniprot:I3LB48
Length = 163
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 83/140 (59%), Positives = 101/140 (72%)
Query: 197 DYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGKLSCQ 256
DY+ QG+DQLQ +I+TIKTNP+DRRII+CAWNP D+P MALPPCH L QFYV +G+LSCQ
Sbjct: 2 DYSGQGVDQLQKVIDTIKTNPDDRRIILCAWNPKDLPLMALPPCHALCQFYVVNGELSCQ 61
Query: 257 LYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKG----YRRGTRDLFSRPF 312
LYQRS DMGLGVPFNIASY+LLTYMIAH+TGL + + ++ G Y L +
Sbjct: 62 LYQRSGDMGLGVPFNIASYALLTYMIAHITGL-KPGDFVHTLGDAHIYLNHIEPLKIQLQ 120
Query: 313 RRHGTIP-LSVYMKVYKVGD 331
R P L + KV K+ D
Sbjct: 121 REPRPFPKLKILRKVEKIDD 140
>UNIPROTKB|J9NYS9 [details] [associations]
symbol:J9NYS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:KQVRNRI EMBL:AAEX03014640
Ensembl:ENSCAFT00000024619 Uniprot:J9NYS9
Length = 137
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 83/122 (68%), Positives = 98/122 (80%)
Query: 332 IVDIKGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKH 391
I+DI G G VQKGMP K YHGKTGRV+NVTQHA G++VNK+V+ +I+ KRINVRIEHIKH
Sbjct: 17 ILDI-GMGTVQKGMPHKCYHGKTGRVYNVTQHAFGIVVNKQVKGKILAKRINVRIEHIKH 75
Query: 392 SKCREDFLKRVKENELKRKEAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEF 450
SK ++ FLKRVKEN+ K+KEAKEKG V LK QPA PR AH V + R P +L PIPYEF
Sbjct: 76 SKSQDRFLKRVKENDQKKKEAKEKGTWVQLKCQPAPPREAHFVRTNRKEPELLEPIPYEF 135
Query: 451 IA 452
+A
Sbjct: 136 MA 137
>RGD|1566281 [details] [associations]
symbol:RGD1566281 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1566281 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 IPI:IPI00767177 Ensembl:ENSRNOT00000048719
ArrayExpress:F1M5C7 Uniprot:F1M5C7
Length = 128
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 83/128 (64%), Positives = 97/128 (75%)
Query: 326 VYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVR 385
+YK GDIVDIKG G +QKGMP K YHGK RV+NVTQHAV +IVNK+V+ +I+ KRINVR
Sbjct: 1 IYKKGDIVDIKGMGTIQKGMPHKCYHGKIRRVYNVTQHAVCIIVNKQVKGKILAKRINVR 60
Query: 386 IEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLA 444
IEHIK SK R+ FLK VKEN+ K+KEAKEKG V LK QPA PR A V + P +L
Sbjct: 61 IEHIKQSKSRDSFLKHVKENDQKKKEAKEKGTWVQLKHQPAPPREAQFVRTNGKEPELLE 120
Query: 445 PIPYEFIA 452
PIPY F+A
Sbjct: 121 PIPYGFMA 128
>UNIPROTKB|J9NZU6 [details] [associations]
symbol:J9NZU6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03007785
Ensembl:ENSCAFT00000001596 OMA:RIERIKH Uniprot:J9NZU6
Length = 118
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 81/117 (69%), Positives = 94/117 (80%)
Query: 337 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCRE 396
G G VQKGMP K YHGKTGRV++VTQHAVG++VNK+V+ +I+ KRINVRIEHIKHSK R
Sbjct: 2 GMGTVQKGMPHKCYHGKTGRVYSVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRG 61
Query: 397 DFLKRVKENELKRKEAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
FLKRVKEN+ K+KEAKEKG V LKRQPA PR AH V + P +L PIPYEF+A
Sbjct: 62 SFLKRVKENDQKKKEAKEKGTWVLLKRQPAPPREAHFVRTNGKEPELLEPIPYEFMA 118
>UNIPROTKB|F1LVT4 [details] [associations]
symbol:LOC691365 "Protein LOC691365" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001147 Pfam:PF01157
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 IPI:IPI00763171
Ensembl:ENSRNOT00000041159 OMA:NITQHAM Uniprot:F1LVT4
Length = 128
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 81/128 (63%), Positives = 96/128 (75%)
Query: 326 VYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVR 385
+ K GDIVDIKG G VQKGMP K YH KT RV+N+TQHA+G+IV K+V+ + + KRINVR
Sbjct: 1 IAKKGDIVDIKGMGTVQKGMPHKCYHSKTRRVYNITQHAMGIIVKKQVKGKTLAKRINVR 60
Query: 386 IEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLA 444
EHIKHSK R+ FLKRVKEN+ K+KEAKEKG V LKRQPA PR AH V + P +L
Sbjct: 61 TEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLE 120
Query: 445 PIPYEFIA 452
P PY +A
Sbjct: 121 PSPYGLMA 128
>UNIPROTKB|F1M361 [details] [associations]
symbol:F1M361 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00782358 PRIDE:F1M361 Ensembl:ENSRNOT00000021633
Uniprot:F1M361
Length = 149
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 87/154 (56%), Positives = 103/154 (66%)
Query: 299 GYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVF 358
G +R R LFS F +HG +PL YM +YK GD VDIKG V+K K Y KTGRV
Sbjct: 1 GKQRAVRYLFSGTFWKHGVVPLVTYMGIYKKGDTVDIKGMSPVRK-TSHKCYRSKTGRVC 59
Query: 359 NVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKEKGIK 418
+VTQHAVG+IVNK+V+ +++ KRI EHIKH K R+ FLKRVK N+ K KEAKEKG
Sbjct: 60 SVTQHAVGIIVNKQVKDKMLAKRI----EHIKHPKSRDGFLKRVKANDQKEKEAKEKGTW 115
Query: 419 VNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEFIA 452
V LKRQPA PR AH V R P + PIPY +A
Sbjct: 116 VQLKRQPAPPREAHFVRTRKKPELGEPIPYGLMA 149
>RGD|1565555 [details] [associations]
symbol:RGD1565555 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1565555 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00778366 Ensembl:ENSRNOT00000058884 OMA:SIPYELM
Uniprot:D3ZCN5
Length = 158
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 85/158 (53%), Positives = 107/158 (67%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDI---KGHGAVQKGMPFKDY 350
MTN+KG RGT +FSRPF G PLS + G V + +G+G KGMP + Y
Sbjct: 1 MTNTKGKMRGTWSMFSRPFLLAGHHPLSQDALAERQGPEVSLVRHQGNGHCSKGMPHQCY 60
Query: 351 HGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRK 410
HGK R +NVTQHA+G+IVNK+V+ +I+ KRINVRIEHIKH K R+ FLK+VKE++ K+K
Sbjct: 61 HGKARRDYNVTQHAMGIIVNKQVKGKILAKRINVRIEHIKHLKSRDSFLKQVKESDQKKK 120
Query: 411 EAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIP 447
EAKEKG V LK QP PR AH V + P ++ PIP
Sbjct: 121 EAKEKGTWVQLKHQPEPPREAHFVRTNGKEPELMEPIP 158
>UNIPROTKB|G3MZB4 [details] [associations]
symbol:G3MZB4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 Pfam:PF01157
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
EMBL:DAAA02006102 Ensembl:ENSBTAT00000028027 OMA:KRINACI
NextBio:20927125 Uniprot:G3MZB4
Length = 165
Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
Identities = 87/166 (52%), Positives = 111/166 (66%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MT++KG RRGT +FSRPF G +PL+ YM++YK D VD K G VQKGM K YHGK
Sbjct: 1 MTSTKGERRGTLHMFSRPFGELGIVPLATYMQIYKKDDTVDTKRLGNVQKGMLQKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+ +TQHAVG+ VNK+V+ +I+ KRIN I+ IKHSK R+ FLK VKEN+ +KE K
Sbjct: 61 TGRVY-ITQHAVGITVNKQVKGKILVKRINACIKQIKHSKSRDSFLKCVKENDQYKKETK 119
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGRTAPV-------MLAPIPYEFIA 452
EKG V LK+Q PR + V + +L PI Y+F+A
Sbjct: 120 EKGAWVQLKQQFPPPREVYFVRINVKELKTVLTVDLLEPILYKFMA 165
>UNIPROTKB|F1M235 [details] [associations]
symbol:F1M235 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00564280 Ensembl:ENSRNOT00000045804 Uniprot:F1M235
Length = 129
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 80/129 (62%), Positives = 95/129 (73%)
Query: 326 VYKVGDIVDIKGHGAVQKGMP-FKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINV 384
+YK GD VDIKG G VQK MP K YH KTGRV+NVTQHAVG+IVNK+V+ + + KRINV
Sbjct: 1 IYKKGDFVDIKGMGTVQKRMPPHKCYHVKTGRVYNVTQHAVGIIVNKQVKGKALAKRINV 60
Query: 385 RIEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVML 443
+IEHIK R+ FLKRV+EN+ K+KE KEKG V LKRQPA PR AH V + P +L
Sbjct: 61 QIEHIKQLNSRDSFLKRVRENDQKKKEDKEKGTWVPLKRQPAPPREAHFVRTNGKEPELL 120
Query: 444 APIPYEFIA 452
IPY F+A
Sbjct: 121 ESIPYGFMA 129
>UNIPROTKB|F1LXP6 [details] [associations]
symbol:F1LXP6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00568095 Ensembl:ENSRNOT00000049422 Uniprot:F1LXP6
Length = 123
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 78/123 (63%), Positives = 92/123 (74%)
Query: 326 VYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVR 385
+YK GDIVDIK VQK MP YH KTGRV+NVTQHA+G+IVNK+V+ +I+ KRINVR
Sbjct: 1 IYKKGDIVDIKRMDTVQKRMPHYCYHSKTGRVYNVTQHALGIIVNKQVKGKILAKRINVR 60
Query: 386 IEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLA 444
IE IKHSK R+ FLKRVKE++ K+KEAKEKG V LK Q PR AH V + R P +L
Sbjct: 61 IEQIKHSKSRDSFLKRVKESDQKKKEAKEKGTWVQLKLQSEPPREAHFVRTNRKEPELLE 120
Query: 445 PIP 447
PIP
Sbjct: 121 PIP 123
>UNIPROTKB|D4A886 [details] [associations]
symbol:D4A886 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00564567
Ensembl:ENSRNOT00000052276 Uniprot:D4A886
Length = 141
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 87/160 (54%), Positives = 105/160 (65%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M N+KG RRGT+ +FSR FR HG +PL+ MK GDI+DIK VQK M K YH K
Sbjct: 1 MMNTKGRRRGTQ-MFSRLFREHGVVPLATCMK----GDIIDIKN---VQKEMSHKCYHSK 52
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVTQHAV +IVNK+V+ +++ KRINVRIEHIKHSK R+ K+AK
Sbjct: 53 TGRVYNVTQHAVAIIVNKQVKGKMLAKRINVRIEHIKHSKSRDGL-----------KKAK 101
Query: 414 EKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
EKG V K QP PR AH V + P +L PIPY F+A
Sbjct: 102 EKGTWVQRKPQPVPPREAHFVKTNGKEPELLEPIPYGFMA 141
>RGD|1563048 [details] [associations]
symbol:RGD1563048 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1563048 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OMA:KENDQKQ IPI:IPI00566561
Ensembl:ENSRNOT00000042722 Uniprot:F1LV87
Length = 130
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 74/113 (65%), Positives = 87/113 (76%)
Query: 341 VQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLK 400
VQKGMP K YHGK GRV+NVTQHAVG+IVN +V+ +I+ KR NV+ EHIKHSK R+ FLK
Sbjct: 18 VQKGMPHKCYHGKIGRVYNVTQHAVGIIVNNQVKGKILAKRFNVQTEHIKHSKSRDSFLK 77
Query: 401 RVKENELKRKEAKEKGIKVNLKRQPAQPRPAHIV-SGRTAPVMLAPIPYEFIA 452
RVKEN+ K+KEAKEKG V LKRQPA PR AH V + P +L PIPY +A
Sbjct: 78 RVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPYGLMA 130
>RGD|1596172 [details] [associations]
symbol:LOC689132 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1596172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00568318 Ensembl:ENSRNOT00000047160 Uniprot:D3ZH87
Length = 156
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 75/142 (52%), Positives = 97/142 (68%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPL-SVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHG 352
MTN+KG RRG + PFR+H +PL +YM++Y G I+DIKG G VQK MP K YH
Sbjct: 1 MTNTKGKRRG-----NHPFRKHVVVPLICIYMQIYNKGGIIDIKGMGTVQKRMPQKCYHS 55
Query: 353 KTGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEA 412
+TGR +NVTQH +G I +K+V+ +I+ RINV+IE IKH K R FLK VKE + + K A
Sbjct: 56 QTGRXYNVTQHVIGTIAHKQVKGKILVMRINVQIEQIKHWKSRYSFLKPVKETDQRNKNA 115
Query: 413 KEKGIKVNLKRQPAQPRPAHIV 434
KEKG + LK QP P+ AH +
Sbjct: 116 KEKGSWIQLKCQPVPPKEAHFM 137
>DICTYBASE|DDB_G0279387 [details] [associations]
symbol:rpl21 "S60 ribosomal protein L21"
species:44689 "Dictyostelium discoideum" [GO:0009617 "response to
bacterium" evidence=IEP] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
dictyBase:DDB_G0279387 GO:GO:0009617 GenomeReviews:CM000152_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000030
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889
PANTHER:PTHR20981 RefSeq:XP_641724.1 ProteinModelPortal:Q54X53
SMR:Q54X53 STRING:Q54X53 EnsemblProtists:DDB0229962 GeneID:8621919
KEGG:ddi:DDB_G0279387 OMA:NDAARHE ProtClustDB:PTZ00189
Uniprot:Q54X53
Length = 160
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 78/159 (49%), Positives = 105/159 (66%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
M +S G R TR LFSR FR HG + + +++ +++GD VDIK G V KGMP K YHG+
Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGR 60
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAK 413
TGRV+NVT AVGVI+NKRV RII K+I+VR EH+K S LKR++EN+ EAK
Sbjct: 61 TGRVWNVTPRAVGVIINKRVGPRIIAKKIHVRTEHVKPSNSMAAHLKRIQENKKAVVEAK 120
Query: 414 EKGIKVNLKRQPAQPRPAHIVSGR-TAPVMLAPIPYEFI 451
+ G V+++R PA P+ V+ R T V + P+ YE +
Sbjct: 121 KAGKWVDVRRNPAAPKDGFFVNPRNTEFVEVKPVKYELL 159
>GENEDB_PFALCIPARUM|PF14_0240 [details] [associations]
symbol:PF14_0240 "ribosomal protein L21e,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0005739 GO:GO:0006412
GO:GO:0003735 EMBL:AE014187 InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981
OMA:KQVRNRI ProtClustDB:PTZ00189 RefSeq:XP_001348414.1
ProteinModelPortal:Q8ILK3 IntAct:Q8ILK3 MINT:MINT-1664699
PRIDE:Q8ILK3 EnsemblProtists:PF14_0240:mRNA GeneID:811822
KEGG:pfa:PF14_0240 EuPathDB:PlasmoDB:PF3D7_1426000 Uniprot:Q8ILK3
Length = 161
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 297 SKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGR 356
S+G R GTR FS+ FR+HG + Y++ GD VDI QKGMPF YHGKTG+
Sbjct: 5 SRGKRSGTRYKFSKKFRKHGECTANKYLEKLNYGDYVDIVCDSTQQKGMPFNYYHGKTGK 64
Query: 357 VFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFL-KRVKENELKRKEAKEK 415
+F++T+ VGV+VNKRV+ RI K++ VRIEH++ S+C EDFL +++K EL KEAK K
Sbjct: 65 IFHITKRGVGVLVNKRVKHRIEQKKVCVRIEHVRKSRCNEDFLLRKIKNAELI-KEAKLK 123
Query: 416 GIKVNLKRQPAQPRPAHIVSGRTAPVM-LAPIPY 448
+N+KR+ P+PA ++ + ++ + P+P+
Sbjct: 124 NEHINIKRKTEGPKPAAMIKVPPSKIITIEPLPF 157
>UNIPROTKB|Q8ILK3 [details] [associations]
symbol:PF14_0240 "60S ribosomal protein L21e, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 EMBL:AE014187 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 HOGENOM:HOG000194513 KO:K02889
PANTHER:PTHR20981 OMA:KQVRNRI ProtClustDB:PTZ00189
RefSeq:XP_001348414.1 ProteinModelPortal:Q8ILK3 IntAct:Q8ILK3
MINT:MINT-1664699 PRIDE:Q8ILK3 EnsemblProtists:PF14_0240:mRNA
GeneID:811822 KEGG:pfa:PF14_0240 EuPathDB:PlasmoDB:PF3D7_1426000
Uniprot:Q8ILK3
Length = 161
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 70/154 (45%), Positives = 103/154 (66%)
Query: 297 SKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGR 356
S+G R GTR FS+ FR+HG + Y++ GD VDI QKGMPF YHGKTG+
Sbjct: 5 SRGKRSGTRYKFSKKFRKHGECTANKYLEKLNYGDYVDIVCDSTQQKGMPFNYYHGKTGK 64
Query: 357 VFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFL-KRVKENELKRKEAKEK 415
+F++T+ VGV+VNKRV+ RI K++ VRIEH++ S+C EDFL +++K EL KEAK K
Sbjct: 65 IFHITKRGVGVLVNKRVKHRIEQKKVCVRIEHVRKSRCNEDFLLRKIKNAELI-KEAKLK 123
Query: 416 GIKVNLKRQPAQPRPAHIVSGRTAPVM-LAPIPY 448
+N+KR+ P+PA ++ + ++ + P+P+
Sbjct: 124 NEHINIKRKTEGPKPAAMIKVPPSKIITIEPLPF 157
>UNIPROTKB|G3V1B3 [details] [associations]
symbol:RPL21 "Ribosomal protein L21, isoform CRA_f"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
EMBL:CH471075 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 UniGene:Hs.381123
UniGene:Hs.535873 HGNC:HGNC:10313 ChiTaRS:RPL21 EMBL:AL159977
ProteinModelPortal:G3V1B3 SMR:G3V1B3 PRIDE:G3V1B3
Ensembl:ENST00000461690 ArrayExpress:G3V1B3 Bgee:G3V1B3
Uniprot:G3V1B3
Length = 87
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 59/79 (74%), Positives = 70/79 (88%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKGMP K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 354 TGRVFNVTQHAVGVIVNKR 372
TGRV+NVTQHAVG++VNK+
Sbjct: 61 TGRVYNVTQHAVGIVVNKQ 79
>UNIPROTKB|J9PAH7 [details] [associations]
symbol:J9PAH7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03003187
Ensembl:ENSCAFT00000029967 Uniprot:J9PAH7
Length = 150
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 77/154 (50%), Positives = 99/154 (64%)
Query: 301 RRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTGRVFNV 360
R+G+ +FSRPF + M+VYK GD V IKG VQ MP K YHGKTG+V+N
Sbjct: 7 RKGSGYMFSRPF--------AASMQVYKTGDTVAIKGVNTVQNEMPHKRYHGKTGKVYNG 58
Query: 361 TQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKEKGIKVN 420
TQHAVG+ VNK+V+ R + KRI+VR EHIKHSK R+ LK +KEN+ K+KEAKEK +
Sbjct: 59 TQHAVGIAVNKQVKGRRLAKRIDVRSEHIKHSKSRDRLLKPLKENDQKKKEAKEK--LLG 116
Query: 421 LKRQPAQP-RPAHIV-SGRTAPVMLAPIPYEFIA 452
PA + AH V + R +L P Y+F+A
Sbjct: 117 STEVPAGSIQEAHFVRTNRKELKLLKPTLYKFMA 150
>UNIPROTKB|D4A4G8 [details] [associations]
symbol:D4A4G8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 IPI:IPI00562174
Ensembl:ENSRNOT00000050067 Uniprot:D4A4G8
Length = 144
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 76/158 (48%), Positives = 99/158 (62%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGT +FSRP R+HG + L+ M+++K GDI DIKG G VQKGMP K YH K
Sbjct: 1 MTNTKGRRRGTWCMFSRPLRKHGAVLLATNMRIHK-GDIADIKGMGTVQKGMPPKCYHSK 59
Query: 354 TGRVFNVTQHAVGVIVNKRVRTRI-IPKRINVRIEHIKHSKCREDFLKRVKENELKRKEA 412
TGRV+NV+ +R + + KRIN KH + R+ FLKRV+EN+ K+KEA
Sbjct: 60 TGRVYNVSS---------MLRASLYLAKRINT-----KHLRSRDSFLKRVEENDQKKKEA 105
Query: 413 KEKGIKVNLKRQPAQPRPAHIVSGRTAPVMLAPIPYEF 450
KEKG V LK + P + + P +L P+PY F
Sbjct: 106 KEKGAWVQLKHHLSHPEKDTCDTNKE-PKLLEPMPYGF 142
>TIGR_CMR|SO_1335 [details] [associations]
symbol:SO_1335 "thymidylate synthase" species:211586
"Shewanella oneidensis MR-1" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009157 "deoxyribonucleoside
monophosphate biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_716955.1 ProteinModelPortal:Q8EH94 SMR:Q8EH94
GeneID:1169156 KEGG:son:SO_1335 PATRIC:23522326 Uniprot:Q8EH94
Length = 264
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 63/112 (56%), Positives = 80/112 (71%)
Query: 172 KEGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPID 231
+ GDLGPVYG QWR + + + + IDQ+ +I IK+ P+ RR+I+ AWN +
Sbjct: 86 ENGDLGPVYGAQWRSWPTQ--------SGEAIDQISQVIAQIKSQPDSRRLIVSAWNVGE 137
Query: 232 MPKMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIA 283
+ KMAL PCH QFYVADGKLSCQLYQRS D+ LG+PFNIASY+LLT M+A
Sbjct: 138 LDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVA 189
Score = 282 (104.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 63/134 (47%), Positives = 81/134 (60%)
Query: 75 QQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEELL 134
QQYL L+ I+ G KSDRTG GT S+FG QMRFDL+ G FPL+TTK+ + ++ ELL
Sbjct: 2 QQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKG-FPLVTTKKCHMRSIIHELL 60
Query: 135 WFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKDM 194
WF+KG TN L D V IWD E+ D + GDLGPVYG QWR + + +
Sbjct: 61 WFLKGDTNIAYLRDNKVSIWD-----EWAD-------ENGDLGPVYGAQWRSWPTQSGEA 108
Query: 195 FTDYTDQGIDQLQN 208
D Q I Q+++
Sbjct: 109 I-DQISQVIAQIKS 121
>UNIPROTKB|F1PUD9 [details] [associations]
symbol:F1PUD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03000212
Ensembl:ENSCAFT00000030679 Uniprot:F1PUD9
Length = 150
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 71/159 (44%), Positives = 103/159 (64%)
Query: 296 NSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGKTG 355
N + R +FS R+HG +PL+ M++YK GDIV +KG G++Q+GMP K YH +
Sbjct: 3 NDQNKEEEKRYMFSGSSRKHGVVPLATSMRIYKKGDIVSLKGMGSIQEGMPHKCYHVRPE 62
Query: 356 RVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKEK 415
RV +VTQ+AVG++VNK+ + +I+ KR NV IE +KHSK + F KR+KEN+ K ++ K
Sbjct: 63 RVCSVTQYAVGIVVNKQGKGKILAKRTNVIIERMKHSKS-DSFRKRMKENDQKNRKPK-- 119
Query: 416 GIKVNLKRQPAQPRPAHIV--SGRTAPVMLAPIPYEFIA 452
R+PA PR A V +G+ P +L IP+EF+A
Sbjct: 120 -------RKPAPPREACFVRTNGKE-PELLELIPHEFMA 150
>UNIPROTKB|P0A884 [details] [associations]
symbol:thyA "thymidylate synthase" species:83333
"Escherichia coli K-12" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 GO:GO:0006417
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U29581 GO:GO:0003723 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:X03966 GO:GO:0006235 EMBL:J01710
eggNOG:COG0207 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
HOGENOM:HOG000257900 PIR:A00549 RefSeq:NP_417304.1
RefSeq:YP_491032.1 PDB:1AIQ PDB:1AJM PDB:1AN5 PDB:1AOB PDB:1AXW
PDB:1BDU PDB:1BID PDB:1BJG PDB:1BQ1 PDB:1BQ2 PDB:1DDU PDB:1DNA
PDB:1EV5 PDB:1EV8 PDB:1EVF PDB:1EVG PDB:1F4B PDB:1F4C PDB:1F4D
PDB:1F4E PDB:1F4F PDB:1F4G PDB:1FFL PDB:1FWM PDB:1JG0 PDB:1JTQ
PDB:1JTU PDB:1JUT PDB:1KCE PDB:1KZI PDB:1KZJ PDB:1NCE PDB:1QQQ
PDB:1SYN PDB:1TDU PDB:1TJS PDB:1TLC PDB:1TLS PDB:1TRG PDB:1TSD
PDB:1TSN PDB:1TYS PDB:1ZPR PDB:2A9W PDB:2BBQ PDB:2FTN PDB:2FTO
PDB:2FTQ PDB:2G8O PDB:2G8X PDB:2KCE PDB:2TSC PDB:2VET PDB:2VF0
PDB:3B5B PDB:3B9H PDB:3BFI PDB:3BGX PDB:3BHL PDB:3BHR PDB:3TMS
PDB:4F2V PDB:4GEV PDBsum:1AIQ PDBsum:1AJM PDBsum:1AN5 PDBsum:1AOB
PDBsum:1AXW PDBsum:1BDU PDBsum:1BID PDBsum:1BJG PDBsum:1BQ1
PDBsum:1BQ2 PDBsum:1DDU PDBsum:1DNA PDBsum:1EV5 PDBsum:1EV8
PDBsum:1EVF PDBsum:1EVG PDBsum:1F4B PDBsum:1F4C PDBsum:1F4D
PDBsum:1F4E PDBsum:1F4F PDBsum:1F4G PDBsum:1FFL PDBsum:1FWM
PDBsum:1JG0 PDBsum:1JTQ PDBsum:1JTU PDBsum:1JUT PDBsum:1KCE
PDBsum:1KZI PDBsum:1KZJ PDBsum:1NCE PDBsum:1QQQ PDBsum:1SYN
PDBsum:1TDU PDBsum:1TJS PDBsum:1TLC PDBsum:1TLS PDBsum:1TRG
PDBsum:1TSD PDBsum:1TSN PDBsum:1TYS PDBsum:1ZPR PDBsum:2A9W
PDBsum:2BBQ PDBsum:2FTN PDBsum:2FTO PDBsum:2FTQ PDBsum:2G8O
PDBsum:2G8X PDBsum:2KCE PDBsum:2TSC PDBsum:2VET PDBsum:2VF0
PDBsum:3B5B PDBsum:3B9H PDBsum:3BFI PDBsum:3BGX PDBsum:3BHL
PDBsum:3BHR PDBsum:3TMS PDBsum:4F2V PDBsum:4GEV
ProteinModelPortal:P0A884 SMR:P0A884 DIP:DIP-48261N IntAct:P0A884
MINT:MINT-1265510 PRIDE:P0A884 EnsemblBacteria:EBESCT00000001730
EnsemblBacteria:EBESCT00000017304 GeneID:12933064 GeneID:949035
KEGG:ecj:Y75_p2761 KEGG:eco:b2827 PATRIC:32121072 EchoBASE:EB0995
EcoGene:EG11002 BioCyc:EcoCyc:THYMIDYLATESYN-MONOMER
BioCyc:ECOL316407:JW2795-MONOMER
BioCyc:MetaCyc:THYMIDYLATESYN-MONOMER SABIO-RK:P0A884
BindingDB:P0A884 ChEMBL:CHEMBL2555 EvolutionaryTrace:P0A884
Genevestigator:P0A884 Uniprot:P0A884
Length = 264
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 63/118 (53%), Positives = 81/118 (68%)
Query: 172 KEGDLGPVYGFQWRHYGAEYKDMFTDYTDQGIDQLQNIINTIKTNPNDRRIIMCAWNPID 231
+ GDLGPVYG QWR + + IDQ+ ++N +K +P+ RRII+ AWN +
Sbjct: 86 ENGDLGPVYGKQWRAWPTP--------DGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGE 137
Query: 232 MPKMALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
+ KMAL PCH QFYVADGKLSCQLYQRS D+ LG+PFNIASY+LL +M+A L+
Sbjct: 138 LDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLE 195
Score = 275 (101.9 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 60/134 (44%), Positives = 82/134 (61%)
Query: 75 QQYLHLLDKIIKTGHKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEELL 134
+QYL L+ K++ G +K+DRTG GTLS+FG QMRF+L +G FPL+TTKR + ++ ELL
Sbjct: 2 KQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDG-FPLVTTKRCHLRSIIHELL 60
Query: 135 WFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKDM 194
WF++G TN L + V IWD E+ D + GDLGPVYG QWR +
Sbjct: 61 WFLQGDTNIAYLHENNVTIWD-----EWAD-------ENGDLGPVYGKQWRAWPTP-DGR 107
Query: 195 FTDYTDQGIDQLQN 208
D ++QL+N
Sbjct: 108 HIDQITTVLNQLKN 121
>UNIPROTKB|O66108 [details] [associations]
symbol:thyA "Thymidylate synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004799 "thymidylate
synthase activity" evidence=ISS] [GO:0009265
"2'-deoxyribonucleotide biosynthetic process" evidence=ISS]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AJ006514 GO:GO:0009265
eggNOG:COG0207 KO:K00560 ProtClustDB:PRK01827 OMA:KSWDANA
EMBL:Y17135 EMBL:AY143429 PIR:C82295 RefSeq:NP_230324.1
ProteinModelPortal:O66108 DNASU:2615464 GeneID:2615464
KEGG:vch:VC0675 PATRIC:20080467 Uniprot:O66108
Length = 283
Score = 278 (102.9 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 70/215 (32%), Positives = 107/215 (49%)
Query: 75 QQYLHLLDKIIKTG-HKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEEL 133
+QYL L +I+ G +++RTG L++ A + +D+ N FPL+TT++ FWK V EL
Sbjct: 2 RQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAEL 61
Query: 134 LWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKD 193
L +I+G NA + G K WD N+ + E D+G VYG Q R +
Sbjct: 62 LGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKP--- 118
Query: 194 MFTDYTDQG-IDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGK 252
D G IDQL+ I++ + +DR I+ +NP + L PC F +
Sbjct: 119 ------DGGHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDT 172
Query: 253 LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTG 287
L QRS D+ LG+ FN+ + ++A +TG
Sbjct: 173 LYLNSTQRSCDVPLGLNFNMVQVYVFLALMAQITG 207
Score = 39 (18.8 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 355 GRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKE 414
G FN+ Q V V + +I K+ + I ++ +D L+ +++ +LKR+
Sbjct: 187 GLNFNMVQ----VYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPFPA 242
Query: 415 KGIKVNLKRQPAQ 427
+N K + Q
Sbjct: 243 PQFHINPKIKTLQ 255
>TIGR_CMR|VC_0675 [details] [associations]
symbol:VC_0675 "thymidylate synthase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AJ006514 GO:GO:0009265
eggNOG:COG0207 KO:K00560 ProtClustDB:PRK01827 OMA:KSWDANA
EMBL:Y17135 EMBL:AY143429 PIR:C82295 RefSeq:NP_230324.1
ProteinModelPortal:O66108 DNASU:2615464 GeneID:2615464
KEGG:vch:VC0675 PATRIC:20080467 Uniprot:O66108
Length = 283
Score = 278 (102.9 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 70/215 (32%), Positives = 107/215 (49%)
Query: 75 QQYLHLLDKIIKTG-HKKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEEL 133
+QYL L +I+ G +++RTG L++ A + +D+ N FPL+TT++ FWK V EL
Sbjct: 2 RQYLDLCQRIVDQGVWVENERTGKRCLTVINADLTYDVGNNQFPLVTTRKSFWKAAVAEL 61
Query: 134 LWFIKGSTNAKELSDKGVKIWDPNSTREYLDSIGLVDRKEGDLGPVYGFQWRHYGAEYKD 193
L +I+G NA + G K WD N+ + E D+G VYG Q R +
Sbjct: 62 LGYIRGYDNAADFRQLGTKTWDANANLNQAWLNNPYRKGEDDMGRVYGVQGRAWAKP--- 118
Query: 194 MFTDYTDQG-IDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGK 252
D G IDQL+ I++ + +DR I+ +NP + L PC F +
Sbjct: 119 ------DGGHIDQLKKIVDDLSRGVDDRGEILNFYNPGEFHMGCLRPCMYSHHFSLLGDT 172
Query: 253 LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTG 287
L QRS D+ LG+ FN+ + ++A +TG
Sbjct: 173 LYLNSTQRSCDVPLGLNFNMVQVYVFLALMAQITG 207
Score = 39 (18.8 bits), Expect = 3.7e-26, Sum P(2) = 3.7e-26
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 355 GRVFNVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRKEAKE 414
G FN+ Q V V + +I K+ + I ++ +D L+ +++ +LKR+
Sbjct: 187 GLNFNMVQ----VYVFLALMAQITGKKPGLAYHKIVNAHIYQDQLELMRDVQLKREPFPA 242
Query: 415 KGIKVNLKRQPAQ 427
+N K + Q
Sbjct: 243 PQFHINPKIKTLQ 255
>TIGR_CMR|CPS_3621 [details] [associations]
symbol:CPS_3621 "thymidylate synthase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 GO:GO:0005737 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
ProtClustDB:PRK01827 RefSeq:YP_270289.1 HSSP:P0A884
ProteinModelPortal:Q47Y31 STRING:Q47Y31 GeneID:3519813
KEGG:cps:CPS_3621 PATRIC:21470169 HOGENOM:HOG000257900 OMA:KSWDANA
BioCyc:CPSY167879:GI48-3643-MONOMER Uniprot:Q47Y31
Length = 283
Score = 263 (97.6 bits), Expect = 6.5e-25, Sum P(2) = 6.5e-25
Identities = 69/215 (32%), Positives = 109/215 (50%)
Query: 77 YLHLLDKIIKTGH-KKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEELLW 135
YL L +II G +++RTG L++ A + +++ N FPL+TT++ F+K + E +
Sbjct: 4 YLDLCQRIIDQGTWVENERTGKRCLTVINADLEYNVGNNEFPLITTRKSFFKSAIAEFIG 63
Query: 136 FIKGSTNAKELSDKGVKIWDPNSTREYLDS-IGLVDRK-EGDLGPVYGFQWRHYGAEYKD 193
+I+G +A + G K WD N+ D+ + RK E D+G VYG Q R +
Sbjct: 64 YIRGYDSAADFRKLGTKTWDANANLN--DAWLNNTHRKGEDDMGRVYGIQGRAWAKP--- 118
Query: 194 MFTDYTDQG-IDQLQNIINTIKTNPNDRRIIMCAWNPIDMPKMALPPCHCLAQFYVADGK 252
D G IDQL+ I++ +K +DR IM +NP + L PC F +
Sbjct: 119 ------DGGTIDQLKKIVDNLKDGIDDRAEIMTFYNPGEFHMGCLRPCMHTHNFSLLGDT 172
Query: 253 LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTG 287
L +QRS D+ LG+ FN + ++A +TG
Sbjct: 173 LHLTSFQRSCDVPLGLNFNQVQVFVFLALMAQITG 207
Score = 44 (20.5 bits), Expect = 6.5e-25, Sum P(2) = 6.5e-25
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 365 VGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKRVKENELKRK 410
V V V + +I K+ + I ++ ED L +KE +LKR+
Sbjct: 193 VQVFVFLALMAQITGKKAGMAYHKIVNAHIYEDQLPLMKEVQLKRE 238
>UNIPROTKB|F1PNM3 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 Pfam:PF00303 PRINTS:PR00108 UniPathway:UPA00575
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468
Ensembl:ENSCAFT00000018205 Uniprot:F1PNM3
Length = 135
Score = 255 (94.8 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 46/55 (83%), Positives = 51/55 (92%)
Query: 235 MALPPCHCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 289
MALPPCH L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 1 MALPPCHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 55
>UNIPROTKB|P49666 [details] [associations]
symbol:RPL21 "60S ribosomal protein L21" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D
EMBL:F14727 ProteinModelPortal:P49666 SMR:P49666 STRING:P49666
Uniprot:P49666
Length = 62
Score = 254 (94.5 bits), Expect = 2.9e-21, P = 2.9e-21
Identities = 45/62 (72%), Positives = 53/62 (85%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQKGMPFKDYHGK 353
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIKG G VQKG+P K YHGK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGK 60
Query: 354 TG 355
TG
Sbjct: 61 TG 62
>UNIPROTKB|D4A5A5 [details] [associations]
symbol:D4A5A5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00949731 Ensembl:ENSRNOT00000057353 Uniprot:D4A5A5
Length = 54
Score = 172 (65.6 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 33/50 (66%), Positives = 39/50 (78%)
Query: 294 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKGHGAVQK 343
M N+KG RRGT +FSRPFR+ G IPL+ M++YK GDIVDIKG G VQK
Sbjct: 1 MANTKGKRRGTWYMFSRPFRKRGVIPLATSMRIYKKGDIVDIKGMGTVQK 50
>UNIPROTKB|F1M6I8 [details] [associations]
symbol:F1M6I8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR20981
IPI:IPI00781568 Ensembl:ENSRNOT00000061155 Uniprot:F1M6I8
Length = 88
Score = 123 (48.4 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 32/87 (36%), Positives = 46/87 (52%)
Query: 373 VRTRIIPKRINVRIEHIKHSKCRE------DFLKRVKENELKRKEAKEKGIKVNLKRQPA 426
+R + IP R + + + + R +F K + E + +EA+EKG V LKRQP
Sbjct: 2 LRAQFIPGRALLCVSKVLYQAQRSPILSSREFKKDLVTKENQEEEAEEKGAWVQLKRQPV 61
Query: 427 QPRPAHIV-SGRTAPVMLAPIPYEFIA 452
PR AH+V + P PIPYEF+A
Sbjct: 62 PPREAHLVRTNGKEPEWQEPIPYEFMA 88
>UNIPROTKB|P67049 [details] [associations]
symbol:thyA "Thymidylate synthase" species:170187
"Streptococcus pneumoniae TIGR4" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005737 EMBL:AE005672 GenomeReviews:AE005672_GR GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
GO:GO:0006235 eggNOG:COG0207 KO:K00560 ProtClustDB:PRK01827
PIR:E95077 RefSeq:NP_345174.1 ProteinModelPortal:P67049
IntAct:P67049 EnsemblBacteria:EBSTRT00000026100 GeneID:930618
KEGG:spn:SP_0669 PATRIC:19705703 HOGENOM:HOG000257898 OMA:ANPWNRR
Uniprot:P67049
Length = 279
Score = 98 (39.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 90 KKSDRTGVGTLSLFGAQMRFDLTNGTFPLLTTKRVFWKGVVEELLWFIKGSTNAKE-LSD 148
K D T + + GA +DL+ G FP+ T + + K ++E+LW + +N+ E L+D
Sbjct: 28 KYKDGTVANSKYVTGAFSEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLEVLND 87
Query: 149 K-GVKIWD 155
K V W+
Sbjct: 88 KYNVHYWN 95
Score = 82 (33.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 28/85 (32%), Positives = 39/85 (45%)
Query: 204 DQLQNIINTIKTNPNDRRIIMCAWNPIDMPKM-ALPPCHCLAQFYV--ADGK--LSCQLY 258
D + ++ ++TNP +RR I+ W+ + L PC F V DG+ L L
Sbjct: 117 DIINKLLKQLETNPWNRRNIISLWDYQAFEETDGLLPCAFQTMFDVRRVDGEIYLDATLT 176
Query: 259 QRSADMGLGVPFNIASYSLLTYMIA 283
QRS DM + N Y L MIA
Sbjct: 177 QRSNDMLVAHHINAMQYVALQMMIA 201
>UNIPROTKB|H7C2F9 [details] [associations]
symbol:R3HDM1 "R3H domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001374 Pfam:PF01424 PROSITE:PS51061
SMART:SM00393 GO:GO:0003676 InterPro:IPR024771 Pfam:PF12752
EMBL:AC011893 HGNC:HGNC:9757 ChiTaRS:R3HDM1 EMBL:AC016742
ProteinModelPortal:H7C2F9 Ensembl:ENST00000456040 Uniprot:H7C2F9
Length = 284
Score = 80 (33.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 359 NVTQHAVGVIVNKRVRTRIIPKRINVRIEHIKHSKCREDFLKR-VKENELKRKEAKEKGI 417
NV Q VIVNK TRI ++ N EHIK K EDF KR + + + + + +
Sbjct: 198 NVDQSGKSVIVNKTSNTRIPDQKFN---EHIKDDK-GEDFQKRYILKRDNSSFDKDDNQM 253
Query: 418 KVNLK 422
++ LK
Sbjct: 254 RIRLK 258
Score = 76 (31.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 192 KDMFTDYTDQ-GIDQLQNIINTIKTNPNDRRIIM 224
+D +YTD GID + ++NT+K NP DR +++
Sbjct: 122 RDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLL 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.138 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 452 452 0.00093 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 123
No. of states in DFA: 617 (66 KB)
Total size of DFA: 281 KB (2147 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.04u 0.08s 39.12t Elapsed: 00:00:30
Total cpu time: 39.06u 0.08s 39.14t Elapsed: 00:00:30
Start: Thu Aug 15 13:27:17 2013 End: Thu Aug 15 13:27:47 2013
WARNINGS ISSUED: 1