BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2358
(417 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3
Length = 4377
Score = 348 bits (892), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/327 (53%), Positives = 221/327 (67%), Gaps = 31/327 (9%)
Query: 14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDA-P 72
AQP+P +I K+LGN+ SPIVT+EPRRRKFHKPIT+TIPVP + +G+ N Y GD P
Sbjct: 1181 AQPVPDEIVKKILGNKATFSPIVTVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDTTP 1240
Query: 73 TLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATE 132
LRLLCSITGGT+ AQWED+TGTTPLTF+KDCVSFTT VSARFWL DC V ++ +AT+
Sbjct: 1241 NLRLLCSITGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLATQ 1300
Query: 133 LYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVL 192
LYRE I VP+MAKFVVFAK + +E+ LR FCMTDDK DKTLE QE+F EVA+S+D+EVL
Sbjct: 1301 LYRELICVPYMAKFVVFAKMNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARSKDIEVL 1360
Query: 193 EGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKV 252
EGK +V+ GNL P+TK G QL F +F+ENRLPF+++++D + GR F++EPK
Sbjct: 1361 EGKPIYVDCYGNLAPLTKGGQQLVFNFYSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKT 1420
Query: 253 SKGEAPQQPICVSKGEAPQQPICVLNIVLP----------DDIIPETSLPESELT----- 297
+KG PQ +C LNI LP DD I +T +S +
Sbjct: 1421 TKG-------------LPQTAVCNLNITLPAHKKETESDQDDEIEKTDRRQSFASLALRK 1467
Query: 298 RYQYLTDSSGTARAQWEDVTGTTPLTF 324
RY YLT+ R+ T + P T+
Sbjct: 1468 RYSYLTEPGMIERSTG--ATRSLPTTY 1492
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 93/112 (83%)
Query: 305 SSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHV 364
+ GT+ AQWED+TGTTPLTF+KDCVSFTT VSARFWL DC V ++ +AT+LYRE I V
Sbjct: 1249 TGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLATQLYRELICV 1308
Query: 365 PFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELL 416
P+MAKFVVFAK + +E+ LR FCMTDDK DKTLE QE+F EVA+S+D+E+L
Sbjct: 1309 PYMAKFVVFAKMNDPVESSLRCFCMTDDKVDKTLEQQENFEEVARSKDIEVL 1360
>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2
Length = 3898
Score = 347 bits (890), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 166/269 (61%), Positives = 203/269 (75%), Gaps = 13/269 (4%)
Query: 14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPT 73
AQP+ +++ K+LGN+ SPIVT+EPRRRKFHKPIT+TIPVP+A++ M+N + GDAPT
Sbjct: 1165 AQPMHSELVKKILGNKATFSPIVTLEPRRRKFHKPITMTIPVPKASSDVMLNGFGGDAPT 1224
Query: 74 LRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATEL 133
LRLLCSITGGT AQWED+TGTTPLTFV +CVSFTT VSARFWL+DCR +Q+S A+++
Sbjct: 1225 LRLLCSITGGTTPAQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVAFASQV 1284
Query: 134 YREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLE 193
YRE I VP+MAKFVVFAK + +EARLR FCMTDDK DKTLE QE+F+EVA+SRDVEVLE
Sbjct: 1285 YREIICVPYMAKFVVFAKSHDPIEARLRCFCMTDDKVDKTLEQQENFSEVARSRDVEVLE 1344
Query: 194 GKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVS 253
GK +V+ GNLVP+TKSG F AF+ENRLP V+V+D + GR FM+EPK +
Sbjct: 1345 GKPIYVDCFGNLVPLTKSGQHHIFSFFAFKENRLPLFVKVRDTTQEPCGRLSFMKEPKST 1404
Query: 254 KGEAPQQPICVSKGEAPQQPICVLNIVLP 282
+G Q IC LNI LP
Sbjct: 1405 RGLV-------------HQAICNLNITLP 1420
Score = 175 bits (443), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 95/112 (84%)
Query: 305 SSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHV 364
+ GT AQWED+TGTTPLTFV +CVSFTT VSARFWL+DCR +Q+S A+++YRE I V
Sbjct: 1232 TGGTTPAQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVAFASQVYREIICV 1291
Query: 365 PFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELL 416
P+MAKFVVFAK + +EARLR FCMTDDK DKTLE QE+F+EVA+SRDVE+L
Sbjct: 1292 PYMAKFVVFAKSHDPIEARLRCFCMTDDKVDKTLEQQENFSEVARSRDVEVL 1343
>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4
Length = 3957
Score = 347 bits (889), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/269 (61%), Positives = 202/269 (75%), Gaps = 13/269 (4%)
Query: 14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPT 73
AQP+ +++ K+LGN+ SPIVT+EPRRRKFHKPIT+TIPVP+A++ M+N + GDAPT
Sbjct: 1198 AQPMHSELVKKILGNKATFSPIVTLEPRRRKFHKPITMTIPVPKASSDVMLNGFGGDAPT 1257
Query: 74 LRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATEL 133
LRLLCSITGGT AQWED+TGTTPLTFV +CVSFTT VSARFWL+DCR +Q+S A+++
Sbjct: 1258 LRLLCSITGGTTPAQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVTFASQV 1317
Query: 134 YREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLE 193
YRE I VP+MAKFVVFAK + +EARLR FCMTDDK DKTLE QE+F EVA+SRDVEVLE
Sbjct: 1318 YREIICVPYMAKFVVFAKSHDPIEARLRCFCMTDDKVDKTLEQQENFAEVARSRDVEVLE 1377
Query: 194 GKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVS 253
GK +V+ GNLVP+TKSG F AF+ENRLP V+V+D + GR FM+EPK +
Sbjct: 1378 GKPIYVDCFGNLVPLTKSGQHHIFSFFAFKENRLPLFVKVRDTTQEPCGRLSFMKEPKST 1437
Query: 254 KGEAPQQPICVSKGEAPQQPICVLNIVLP 282
+G Q IC LNI LP
Sbjct: 1438 RGLV-------------HQAICNLNITLP 1453
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/112 (70%), Positives = 94/112 (83%)
Query: 305 SSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHV 364
+ GT AQWED+TGTTPLTFV +CVSFTT VSARFWL+DCR +Q+S A+++YRE I V
Sbjct: 1265 TGGTTPAQWEDITGTTPLTFVNECVSFTTNVSARFWLIDCRQIQESVTFASQVYREIICV 1324
Query: 365 PFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELL 416
P+MAKFVVFAK + +EARLR FCMTDDK DKTLE QE+F EVA+SRDVE+L
Sbjct: 1325 PYMAKFVVFAKSHDPIEARLRCFCMTDDKVDKTLEQQENFAEVARSRDVEVL 1376
>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1
Length = 1961
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/300 (55%), Positives = 209/300 (69%), Gaps = 20/300 (6%)
Query: 14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDA-P 72
AQP+P + K+LGN+ SPIVT+EPRRRKFHKPIT+TIPVP + +G+ N Y GDA P
Sbjct: 1182 AQPVPEETVKKILGNKATFSPIVTVEPRRRKFHKPITMTIPVPPPSGEGVSNGYKGDATP 1241
Query: 73 TLRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATE 132
LRLLCSITGGT+ AQWED+TGTTPLTF+KDCVSFTT VSARFWL DC V ++ +A++
Sbjct: 1242 NLRLLCSITGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLASQ 1301
Query: 133 LYREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVL 192
LYRE I VP+MAKFVVFAK + +E+ LR FCMTDD+ DKTLE QE+F EVA+S+D+EVL
Sbjct: 1302 LYRELICVPYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENFEEVARSKDIEVL 1361
Query: 193 EGKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKV 252
EGK +V+ GNL P+TK G QL F +F+ENRLPF+++++D + GR F++EPK
Sbjct: 1362 EGKPIYVDCYGNLAPLTKGGQQLVFNFYSFKENRLPFSIKIRDTSQEPCGRLSFLKEPKT 1421
Query: 253 SKGEAPQQPICVSKGEAPQQPICVLNIVLPDDIIPETSLPESELT------RYQYLTDSS 306
+KG PQ +C LNI LP E + RY YLT+ S
Sbjct: 1422 TKG-------------LPQTAVCNLNITLPAHKKAEKADRRQSFASLALRKRYSYLTEPS 1468
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 93/112 (83%)
Query: 305 SSGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHV 364
+ GT+ AQWED+TGTTPLTF+KDCVSFTT VSARFWL DC V ++ +A++LYRE I V
Sbjct: 1250 TGGTSPAQWEDITGTTPLTFIKDCVSFTTNVSARFWLADCHQVLETVGLASQLYRELICV 1309
Query: 365 PFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELL 416
P+MAKFVVFAK + +E+ LR FCMTDD+ DKTLE QE+F EVA+S+D+E+L
Sbjct: 1310 PYMAKFVVFAKTNDPVESSLRCFCMTDDRVDKTLEQQENFEEVARSKDIEVL 1361
>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3
Length = 1881
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/269 (50%), Positives = 174/269 (64%), Gaps = 14/269 (5%)
Query: 14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPT 73
AQP+P ++ KLLGN+ SPIVT+EPRRRKFH+PI L IP+P + + GD +
Sbjct: 1110 AQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWTDNPRDSGEGDTTS 1169
Query: 74 LRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATEL 133
LRLLCS+ GGT +AQWED+TGTT L + +C +FTT VSARFWL DC ++ AT L
Sbjct: 1170 LRLLCSVIGGTDQAQWEDITGTTKLVYANECANFTTNVSARFWLSDCPRTAEAVNFATLL 1229
Query: 134 YREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLE 193
Y+E VP+MAKFV+FAK + E RLR +CMTDDK DKTLE E+F EVA+SRD+EVLE
Sbjct: 1230 YKELTAVPYMAKFVIFAKMNDPREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVLE 1289
Query: 194 GKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVS 253
G S F E +GNLVPV K+ Q F++FRENRL V+V+D + G F+R+
Sbjct: 1290 GMSLFAELSGNLVPVKKAAQQRSFHFQSFRENRLAMPVKVRDSSREPGGSLSFLRK---- 1345
Query: 254 KGEAPQQPICVSKGEAPQQPICVLNIVLP 282
K E Q +C LNI +P
Sbjct: 1346 ----------AMKYEDTQHILCHLNITMP 1364
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 81/111 (72%)
Query: 306 SGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVP 365
GT +AQWED+TGTT L + +C +FTT VSARFWL DC ++ AT LY+E VP
Sbjct: 1178 GGTDQAQWEDITGTTKLVYANECANFTTNVSARFWLSDCPRTAEAVNFATLLYKELTAVP 1237
Query: 366 FMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELL 416
+MAKFV+FAK + E RLR +CMTDDK DKTLE E+F EVA+SRD+E+L
Sbjct: 1238 YMAKFVIFAKMNDPREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVL 1288
>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2
Length = 1862
Score = 276 bits (707), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/269 (50%), Positives = 173/269 (64%), Gaps = 14/269 (5%)
Query: 14 AQPIPTDITAKLLGNRVAVSPIVTIEPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPT 73
AQP+P ++ KLLGN+ SPIVT+EPRRRKFH+PI L IP+P + + GD +
Sbjct: 1106 AQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWTDNPRDSGEGDTTS 1165
Query: 74 LRLLCSITGGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATEL 133
LRLLCS+ GGT +AQWED+TGTT L + +C +FTT VSARFWL DC ++ AT L
Sbjct: 1166 LRLLCSVIGGTDQAQWEDITGTTKLIYANECANFTTNVSARFWLSDCPRTAEAVHFATLL 1225
Query: 134 YREAIHVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLE 193
Y+E VP+MAKFV+FAK + E RLR +CMTDDK DKTLE E+F EVA+SRD+EVLE
Sbjct: 1226 YKELTAVPYMAKFVIFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVLE 1285
Query: 194 GKSQFVEFAGNLVPVTKSGDQLRLGFRAFRENRLPFTVRVKDPHADVIGRTLFMREPKVS 253
G F E +GNLVPV K+ Q F++FRENRL V+V+D + G F+R+
Sbjct: 1286 GMPLFAELSGNLVPVKKAAQQRSFHFQSFRENRLAIPVKVRDSSREPGGFLSFLRK---- 1341
Query: 254 KGEAPQQPICVSKGEAPQQPICVLNIVLP 282
K E Q +C LNI +P
Sbjct: 1342 ----------TMKYEDTQHILCHLNITMP 1360
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 81/111 (72%)
Query: 306 SGTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRNVQDSAKMATELYREAIHVP 365
GT +AQWED+TGTT L + +C +FTT VSARFWL DC ++ AT LY+E VP
Sbjct: 1174 GGTDQAQWEDITGTTKLIYANECANFTTNVSARFWLSDCPRTAEAVHFATLLYKELTAVP 1233
Query: 366 FMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVELL 416
+MAKFV+FAK + E RLR +CMTDDK DKTLE E+F EVA+SRD+E+L
Sbjct: 1234 YMAKFVIFAKMNDAREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVL 1284
>sp|Q9HB75|PIDD_HUMAN p53-induced protein with a death domain OS=Homo sapiens GN=PIDD
PE=1 SV=2
Length = 910
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 75/184 (40%), Gaps = 24/184 (13%)
Query: 25 LLGN-RVAVSPIVTI-EPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITG 82
LLG AVSP++ + + F +P+T+ +P+P I S D L LL
Sbjct: 506 LLGEPEAAVSPLLCLSQSGPPSFLQPVTVQLPLPSG-----ITGLSLDRSRLHLL---YW 557
Query: 83 GTARAQWEDVTGTTPLTFVKDCVSFTTTVSARFWLM----DCRNVQDSAKMATELYREAI 138
A W+D+T L F T + +WL +C V A+ A E R +
Sbjct: 558 APPAATWDDITAQVVLELTHLYARFQVTHFSWYWLWYTTKNC--VGGLARKAWERLR--L 613
Query: 139 HVPFMAKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEH-QEHFTEVAKSRDVEVLEGKSQ 197
H + +R + + L+ C+ +K D TL E + S VE+ EG+
Sbjct: 614 H---RVNLIALQRRRDPEQVLLQ--CLPRNKVDATLRRLLERYRGPEPSDTVEMFEGEEF 668
Query: 198 FVEF 201
F F
Sbjct: 669 FAAF 672
>sp|Q9ERV7|PIDD_MOUSE p53-induced protein with a death domain OS=Mus musculus GN=Pidd
PE=1 SV=1
Length = 915
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 19/178 (10%)
Query: 28 NRVAVSPIVTI-EPRRRKFHKPITLTIPVPQAANKGMINQYSGDAPTLRLLCSITGGTAR 86
+ +VSP++ + + F +P+T+ +P+P + +S D L LL T
Sbjct: 515 SEASVSPLLCLSQSGPPSFLQPVTVQLPLPPG-----VTGFSLDRSHLHLLYRTPLTTT- 568
Query: 87 AQWEDVTGTTPLTFVKDCVSFTTTVSARFWLMDCRN--VQDSAKMATELYREAIHVPFMA 144
W+D+T L F F T + +WL V A+ A E R +H
Sbjct: 569 --WDDITTQVALEFTHLYARFQVTHFSWYWLWYTTKTCVGGLARKAWERLR--LH---RV 621
Query: 145 KFVVFAKRIEQLEARLRVFCMTDDKEDKTLEH-QEHFTEVAKSRDVEVLEGKSQFVEF 201
+ +R + + L+ C+ +K D TL + S VE+ EG+ F F
Sbjct: 622 NLIALQRRRDPEQVLLQ--CLPRNKVDATLSRLLVRYRGPEPSETVEMFEGEKFFAAF 677
>sp|B4RN50|SYS_NEIG2 Serine--tRNA ligase OS=Neisseria gonorrhoeae (strain NCCP11945)
GN=serS PE=3 SV=1
Length = 431
Score = 32.0 bits (71), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 144 AKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQ--EHFTEVAKSRDVEVLEGKSQFVEF 201
A+F V +I +L L F + + TL+H EH+T D L+G Q +F
Sbjct: 161 ARFTVMRGQIARLHRALAQFML----DTHTLQHGYTEHYTPYIV--DDTTLQGTGQLPKF 214
Query: 202 AGNLVPVTKSGDQLR 216
A +L VT+ GD+ +
Sbjct: 215 AEDLFHVTRGGDETK 229
>sp|Q6RT24|CENPE_MOUSE Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1
Length = 2474
Score = 32.0 bits (71), Expect = 8.9, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 152 RIEQLEARLRVFCMTDDKEDKTLEHQEHFTEVAKSRDVEVLEGKSQFVEFAGNLVPVTKS 211
++ Q++A LR ++ K LE Q E SR++E LE Q E + VTK
Sbjct: 1679 QLSQVKADLRETVDQMEQLKKKLEAQSSTLE---SREIEKLELTQQLNENLKKITLVTKE 1735
Query: 212 GDQLRLGFRAFRENR 226
D L++ A RE R
Sbjct: 1736 NDSLKIMDEALREER 1750
>sp|Q9JY95|SYS_NEIMB Serine--tRNA ligase OS=Neisseria meningitidis serogroup B (strain
MC58) GN=serS PE=3 SV=1
Length = 431
Score = 32.0 bits (71), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 144 AKFVVFAKRIEQLEARLRVFCMTDDKEDKTLEHQ--EHFTEVAKSRDVEVLEGKSQFVEF 201
A+F V +I +L L F + + TL+H EH+T D L+G Q +F
Sbjct: 161 ARFTVMRGQIARLHRALAQFML----DTHTLQHGYTEHYTPYIV--DDTTLQGTGQLPKF 214
Query: 202 AGNLVPVTKSGDQLR 216
A +L VT+ GD+ +
Sbjct: 215 AEDLFHVTRGGDETK 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 150,466,631
Number of Sequences: 539616
Number of extensions: 6167733
Number of successful extensions: 13254
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 13234
Number of HSP's gapped (non-prelim): 27
length of query: 417
length of database: 191,569,459
effective HSP length: 120
effective length of query: 297
effective length of database: 126,815,539
effective search space: 37664215083
effective search space used: 37664215083
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)