Query psy237
Match_columns 236
No_of_seqs 317 out of 2445
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 23:11:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy237.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/237hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0160 GabT 4-aminobutyrate a 99.9 9.5E-24 2.1E-28 198.1 6.9 148 50-204 4-161 (447)
2 COG4992 ArgD Ornithine/acetylo 99.9 9.2E-23 2E-27 187.9 4.7 113 64-186 6-118 (404)
3 TIGR00699 GABAtrns_euk 4-amino 99.9 2.7E-22 5.9E-27 190.3 7.0 134 47-186 5-140 (464)
4 PRK05769 4-aminobutyrate amino 99.8 1.6E-21 3.5E-26 184.0 6.6 149 49-204 2-159 (441)
5 PRK06918 4-aminobutyrate amino 99.8 2.6E-21 5.7E-26 182.7 6.6 145 53-204 6-159 (451)
6 COG0001 HemL Glutamate-1-semia 99.8 8.7E-21 1.9E-25 176.3 6.2 136 61-208 4-157 (432)
7 PRK05639 4-aminobutyrate amino 99.8 6.7E-21 1.4E-25 180.6 5.5 125 54-186 5-131 (457)
8 PRK06058 4-aminobutyrate amino 99.8 1.4E-20 3E-25 177.5 6.2 138 58-202 13-159 (443)
9 KOG1405|consensus 99.8 1E-20 2.2E-25 170.9 4.8 159 48-210 23-185 (484)
10 KOG1404|consensus 99.8 5.7E-20 1.2E-24 167.7 5.3 116 62-186 9-127 (442)
11 PLN02482 glutamate-1-semialdeh 99.8 7.8E-20 1.7E-24 174.0 5.6 133 62-206 51-201 (474)
12 PRK08360 4-aminobutyrate amino 99.8 1.1E-19 2.4E-24 171.6 4.7 132 63-202 2-143 (443)
13 PRK12389 glutamate-1-semialdeh 99.8 2.2E-19 4.7E-24 168.8 5.9 131 62-204 4-153 (428)
14 PRK08593 4-aminobutyrate amino 99.8 2E-19 4.3E-24 169.9 5.3 135 63-204 3-147 (445)
15 PRK07482 hypothetical protein; 99.8 2E-19 4.3E-24 170.6 5.0 117 62-186 3-129 (461)
16 PRK07495 4-aminobutyrate amino 99.8 3.2E-19 6.9E-24 167.7 5.0 115 65-186 4-119 (425)
17 PRK07046 aminotransferase; Val 99.8 5.1E-19 1.1E-23 167.6 5.3 132 62-206 28-176 (453)
18 PRK06916 adenosylmethionine--8 99.8 4.7E-19 1E-23 168.1 4.9 119 60-186 9-134 (460)
19 PRK06777 4-aminobutyrate amino 99.8 5.6E-19 1.2E-23 165.6 5.2 116 64-186 3-119 (421)
20 PRK00615 glutamate-1-semialdeh 99.7 7.6E-19 1.6E-23 165.6 5.3 130 62-202 5-152 (433)
21 PRK06062 hypothetical protein; 99.7 7.6E-19 1.6E-23 166.3 4.9 115 81-204 34-156 (451)
22 PRK09264 diaminobutyrate--2-ox 99.7 7E-19 1.5E-23 165.1 4.1 134 66-204 5-147 (425)
23 TIGR02407 ectoine_ectB diamino 99.7 8.3E-19 1.8E-23 164.1 4.3 128 72-204 7-143 (412)
24 PRK07678 aminotransferase; Val 99.7 1.2E-18 2.6E-23 164.8 4.9 114 63-186 6-123 (451)
25 PRK04073 rocD ornithine--oxo-a 99.7 1.3E-18 2.9E-23 161.1 5.1 113 63-186 3-115 (396)
26 COG0161 BioA Adenosylmethionin 99.7 8.1E-19 1.7E-23 164.5 3.2 97 83-186 27-123 (449)
27 PRK05965 hypothetical protein; 99.7 1.3E-18 2.9E-23 165.0 4.6 97 82-186 28-125 (459)
28 PRK06541 hypothetical protein; 99.7 1.6E-18 3.6E-23 164.4 5.2 116 63-186 8-130 (460)
29 TIGR00700 GABAtrnsam 4-aminobu 99.7 1.6E-18 3.4E-23 162.4 4.5 120 78-204 11-138 (420)
30 PRK06209 glutamate-1-semialdeh 99.7 2.1E-18 4.5E-23 162.3 5.1 109 64-186 1-122 (431)
31 PRK07483 hypothetical protein; 99.7 1.9E-18 4.2E-23 163.2 3.8 103 76-186 6-108 (443)
32 PRK09792 4-aminobutyrate trans 99.7 3.3E-18 7.2E-23 160.4 5.1 114 66-186 5-119 (421)
33 PRK04612 argD acetylornithine 99.7 2.1E-18 4.5E-23 161.4 3.5 98 79-186 19-116 (408)
34 PRK05964 adenosylmethionine--8 99.7 2.9E-18 6.2E-23 160.6 4.4 98 81-186 23-120 (423)
35 PLN02624 ornithine-delta-amino 99.7 5.2E-18 1.1E-22 161.5 5.9 114 62-186 37-150 (474)
36 PRK08117 4-aminobutyrate amino 99.7 3.3E-18 7.1E-23 160.7 4.3 115 64-186 5-121 (433)
37 PRK05630 adenosylmethionine--8 99.7 3.2E-18 7E-23 160.8 3.6 98 81-186 21-118 (422)
38 PRK06931 diaminobutyrate--2-ox 99.7 7E-18 1.5E-22 160.1 5.7 136 64-204 19-165 (459)
39 TIGR00709 dat 2,4-diaminobutyr 99.7 3.6E-18 7.9E-23 161.1 3.6 118 80-202 19-144 (442)
40 PRK06943 adenosylmethionine--8 99.7 5.1E-18 1.1E-22 160.8 4.6 97 82-186 36-132 (453)
41 PRK08742 adenosylmethionine--8 99.7 6.4E-18 1.4E-22 160.9 5.0 118 62-186 18-147 (472)
42 PRK06173 adenosylmethionine--8 99.7 4.4E-18 9.5E-23 160.2 3.9 95 84-186 28-122 (429)
43 PRK06938 diaminobutyrate--2-ox 99.7 9.5E-18 2.1E-22 159.4 5.8 136 64-204 24-171 (464)
44 PRK06105 aminotransferase; Pro 99.7 5.8E-18 1.3E-22 160.6 4.2 98 82-187 30-128 (460)
45 PRK12403 putative aminotransfe 99.7 7E-18 1.5E-22 160.1 4.7 97 82-186 36-133 (460)
46 PRK09221 beta alanine--pyruvat 99.7 4.8E-18 1.1E-22 160.5 3.4 98 81-186 30-127 (445)
47 PRK07986 adenosylmethionine--8 99.7 5.1E-18 1.1E-22 159.7 2.9 95 84-186 27-121 (428)
48 PRK13360 omega amino acid--pyr 99.7 5.5E-18 1.2E-22 160.1 2.9 98 81-186 27-124 (442)
49 PRK07036 hypothetical protein; 99.7 1E-17 2.3E-22 159.1 4.7 98 81-186 32-130 (466)
50 TIGR00713 hemL glutamate-1-sem 99.7 1.5E-17 3.3E-22 155.2 5.5 112 63-186 1-122 (423)
51 PRK06082 4-aminobutyrate amino 99.7 1.4E-17 3.1E-22 157.9 5.2 119 58-186 28-148 (459)
52 PRK07480 putative aminotransfe 99.7 1.1E-17 2.3E-22 158.7 4.2 97 82-186 32-129 (456)
53 PRK06917 hypothetical protein; 99.7 7.6E-18 1.6E-22 159.3 3.1 97 81-186 13-109 (447)
54 PRK07030 adenosylmethionine--8 99.7 1.3E-17 2.7E-22 158.6 4.4 96 83-186 30-125 (466)
55 PRK08297 L-lysine aminotransfe 99.7 8.9E-18 1.9E-22 158.7 3.1 112 67-186 11-128 (443)
56 PRK07481 hypothetical protein; 99.7 1E-17 2.3E-22 158.4 2.7 98 82-186 24-122 (449)
57 TIGR03251 LAT_fam L-lysine 6-t 99.7 1.9E-17 4.2E-22 155.7 4.5 113 66-186 3-121 (431)
58 PRK11522 putrescine--2-oxoglut 99.7 1.5E-17 3.2E-22 157.9 3.4 97 81-186 62-159 (459)
59 PRK04013 argD acetylornithine/ 99.7 2.6E-17 5.6E-22 152.0 2.9 112 81-203 5-124 (364)
60 PLN02760 4-aminobutyrate:pyruv 99.7 2.8E-17 6E-22 157.7 3.1 99 81-186 70-169 (504)
61 PRK08088 4-aminobutyrate amino 99.7 6.6E-17 1.4E-21 151.5 5.4 116 64-186 4-120 (425)
62 TIGR03372 putres_am_tran putre 99.7 3.8E-17 8.3E-22 154.4 3.1 95 83-186 58-152 (442)
63 PRK00062 glutamate-1-semialdeh 99.6 1E-16 2.2E-21 150.4 5.5 131 62-204 2-150 (426)
64 KOG1402|consensus 99.6 9.2E-17 2E-21 144.4 3.7 115 61-186 20-134 (427)
65 PRK12381 bifunctional succinyl 99.6 9.5E-17 2.1E-21 149.5 4.0 97 79-186 18-114 (406)
66 TIGR03246 arg_catab_astC succi 99.6 1.2E-16 2.6E-21 148.5 4.1 97 79-186 14-110 (397)
67 PLN00144 acetylornithine trans 99.6 8.7E-17 1.9E-21 149.0 2.6 90 86-186 1-90 (382)
68 PF00202 Aminotran_3: Aminotra 99.6 4.5E-17 9.7E-22 148.8 -0.6 94 85-186 1-94 (339)
69 TIGR00508 bioA adenosylmethion 99.6 2.8E-16 6.1E-21 147.8 3.6 96 83-186 28-123 (427)
70 PRK00854 rocD ornithine--oxo-a 99.6 6.4E-16 1.4E-20 143.0 4.9 112 64-186 5-116 (401)
71 PRK06148 hypothetical protein; 99.6 7.2E-16 1.6E-20 158.4 5.1 110 65-186 586-698 (1013)
72 PRK01278 argD acetylornithine 99.6 8.7E-16 1.9E-20 141.7 3.8 96 80-186 11-106 (389)
73 PRK06149 hypothetical protein; 99.6 1.4E-15 3.1E-20 155.7 5.4 114 61-186 543-659 (972)
74 PRK03715 argD acetylornithine 99.6 1.1E-15 2.4E-20 142.4 3.5 95 81-186 17-111 (395)
75 PRK05093 argD bifunctional N-s 99.6 1.3E-15 2.8E-20 141.5 3.7 97 79-186 19-115 (403)
76 KOG1401|consensus 99.6 1.7E-15 3.8E-20 139.1 4.3 122 78-207 34-169 (433)
77 TIGR01885 Orn_aminotrans ornit 99.5 3.1E-15 6.7E-20 138.8 4.1 112 64-186 1-112 (401)
78 PTZ00125 ornithine aminotransf 99.5 6.1E-15 1.3E-19 136.1 3.4 100 76-186 7-106 (400)
79 PRK02936 argD acetylornithine 99.5 4.6E-14 1E-18 129.4 5.9 95 81-186 10-104 (377)
80 PRK02627 acetylornithine amino 99.5 4.7E-14 1E-18 129.7 4.7 112 64-186 3-114 (396)
81 PLN02974 adenosylmethionine-8- 99.4 5.9E-14 1.3E-18 141.1 4.3 118 62-186 312-445 (817)
82 PRK03244 argD acetylornithine 99.4 1.9E-13 4.1E-18 126.3 4.4 114 65-186 8-121 (398)
83 cd00610 OAT_like Acetyl ornith 99.4 2.8E-13 6E-18 125.0 3.1 99 80-186 16-114 (413)
84 KOG1403|consensus 99.4 2.5E-13 5.5E-18 121.3 2.3 109 65-186 8-120 (452)
85 PRK04260 acetylornithine amino 99.3 2E-12 4.3E-17 118.9 5.3 93 81-186 10-102 (375)
86 COG4992 ArgD Ornithine/acetylo 99.2 9.2E-12 2E-16 115.4 3.3 69 148-218 9-79 (404)
87 PRK07505 hypothetical protein; 99.2 2.1E-11 4.6E-16 113.2 5.0 111 65-185 9-122 (402)
88 TIGR00707 argD acetylornithine 99.1 7E-11 1.5E-15 108.0 5.9 96 80-186 7-102 (379)
89 COG0160 GabT 4-aminobutyrate a 99.0 3.4E-10 7.3E-15 107.0 3.2 51 168-218 41-93 (447)
90 PRK07495 4-aminobutyrate amino 98.6 1.7E-08 3.6E-13 95.2 3.3 48 170-217 27-76 (425)
91 TIGR02407 ectoine_ectB diamino 98.6 2.3E-08 5E-13 93.8 3.6 42 170-211 22-63 (412)
92 KOG1404|consensus 98.6 1.8E-08 4E-13 92.9 2.8 49 169-217 36-86 (442)
93 PRK08593 4-aminobutyrate amino 98.6 2E-08 4.3E-13 95.2 3.1 49 170-218 29-79 (445)
94 TIGR03251 LAT_fam L-lysine 6-t 98.6 3.3E-08 7.2E-13 93.3 4.3 62 148-211 4-68 (431)
95 PRK09264 diaminobutyrate--2-ox 98.6 2.8E-08 6E-13 93.5 3.6 44 169-212 25-68 (425)
96 PRK08360 4-aminobutyrate amino 98.6 2.2E-08 4.7E-13 94.9 2.7 49 170-218 28-78 (443)
97 PRK04073 rocD ornithine--oxo-a 98.6 2.9E-08 6.3E-13 92.1 3.1 48 170-217 27-76 (396)
98 TIGR00700 GABAtrnsam 4-aminobu 98.6 2.7E-08 5.9E-13 93.3 2.6 48 170-217 20-69 (420)
99 PRK04612 argD acetylornithine 98.6 4.2E-08 9.1E-13 92.1 3.8 49 169-217 26-76 (408)
100 PRK07482 hypothetical protein; 98.6 3E-08 6.4E-13 94.5 2.5 42 170-211 37-78 (461)
101 COG0161 BioA Adenosylmethionin 98.5 2.4E-08 5.1E-13 94.4 1.7 59 169-227 30-90 (449)
102 PRK06062 hypothetical protein; 98.5 2.6E-08 5.7E-13 94.6 2.0 48 170-217 40-89 (451)
103 PRK06918 4-aminobutyrate amino 98.5 3E-08 6.4E-13 94.0 2.3 50 169-218 40-91 (451)
104 PRK05639 4-aminobutyrate amino 98.5 4E-08 8.7E-13 93.5 3.0 49 169-217 39-89 (457)
105 PRK06541 hypothetical protein; 98.5 3.3E-08 7.1E-13 94.2 2.3 48 170-217 39-88 (460)
106 PRK05769 4-aminobutyrate amino 98.5 4.7E-08 1E-12 92.6 2.9 49 170-218 41-91 (441)
107 PRK08297 L-lysine aminotransfe 98.5 6.1E-08 1.3E-12 91.9 3.5 62 149-212 12-76 (443)
108 PRK05630 adenosylmethionine--8 98.5 3.8E-08 8.2E-13 92.8 2.1 54 170-223 27-82 (422)
109 KOG1402|consensus 98.5 6.3E-08 1.4E-12 87.8 3.4 57 159-217 37-95 (427)
110 PRK06916 adenosylmethionine--8 98.5 3.9E-08 8.4E-13 93.7 2.0 54 170-223 43-98 (460)
111 PRK06777 4-aminobutyrate amino 98.5 4.9E-08 1.1E-12 91.8 2.6 48 170-217 27-76 (421)
112 PRK05964 adenosylmethionine--8 98.5 4.4E-08 9.6E-13 91.9 2.3 48 170-217 29-78 (423)
113 PRK06173 adenosylmethionine--8 98.5 3.6E-08 7.8E-13 93.1 1.6 54 170-223 31-86 (429)
114 PRK07986 adenosylmethionine--8 98.5 4.5E-08 9.8E-13 92.5 2.3 49 170-218 30-80 (428)
115 PRK06058 4-aminobutyrate amino 98.5 4.5E-08 9.7E-13 92.6 2.2 49 169-217 42-92 (443)
116 TIGR00709 dat 2,4-diaminobutyr 98.5 4.2E-08 9E-13 92.9 2.0 44 169-212 25-68 (442)
117 PRK08742 adenosylmethionine--8 98.5 4.8E-08 1E-12 93.4 2.3 50 169-218 50-101 (472)
118 PRK06943 adenosylmethionine--8 98.5 4.3E-08 9.4E-13 93.2 1.9 50 169-218 40-91 (453)
119 COG0001 HemL Glutamate-1-semia 98.5 5.3E-08 1.1E-12 91.3 2.4 65 162-228 34-99 (432)
120 PRK07481 hypothetical protein; 98.5 4.8E-08 1E-12 92.7 2.1 48 170-217 29-78 (449)
121 PRK05965 hypothetical protein; 98.5 4.7E-08 1E-12 93.1 2.0 48 170-217 33-82 (459)
122 PRK09792 4-aminobutyrate trans 98.5 5.4E-08 1.2E-12 91.5 2.3 48 170-217 27-76 (421)
123 PRK06917 hypothetical protein; 98.5 5.3E-08 1.1E-12 92.4 2.2 42 170-211 18-59 (447)
124 TIGR00699 GABAtrns_euk 4-amino 98.5 7.5E-08 1.6E-12 91.9 3.2 44 168-211 43-86 (464)
125 PRK09221 beta alanine--pyruvat 98.5 5.4E-08 1.2E-12 92.3 2.2 49 170-218 36-86 (445)
126 PRK08117 4-aminobutyrate amino 98.5 8.1E-08 1.8E-12 90.4 3.2 48 170-217 30-79 (433)
127 PRK07483 hypothetical protein; 98.5 5.5E-08 1.2E-12 92.2 2.1 42 170-211 17-58 (443)
128 PRK06931 diaminobutyrate--2-ox 98.5 6.8E-08 1.5E-12 92.0 2.5 43 170-212 45-87 (459)
129 PRK07030 adenosylmethionine--8 98.5 6.5E-08 1.4E-12 92.3 2.2 49 170-218 34-84 (466)
130 PRK12381 bifunctional succinyl 98.5 1.2E-07 2.6E-12 88.5 3.9 48 170-217 26-75 (406)
131 PRK04013 argD acetylornithine/ 98.5 8.3E-08 1.8E-12 88.9 2.6 49 169-217 10-60 (364)
132 PRK12389 glutamate-1-semialdeh 98.4 9E-08 2E-12 90.2 2.8 44 169-212 39-82 (428)
133 PRK07678 aminotransferase; Val 98.4 8.2E-08 1.8E-12 91.2 2.3 42 170-211 34-75 (451)
134 PRK13360 omega amino acid--pyr 98.4 7E-08 1.5E-12 91.5 1.9 48 170-217 33-82 (442)
135 PRK12403 putative aminotransfe 98.4 7.4E-08 1.6E-12 91.7 1.9 48 170-217 41-90 (460)
136 PLN00144 acetylornithine trans 98.4 8.2E-08 1.8E-12 89.2 2.1 48 170-217 2-51 (382)
137 PRK07036 hypothetical protein; 98.4 8.6E-08 1.9E-12 91.5 2.1 48 170-217 38-87 (466)
138 PRK06938 diaminobutyrate--2-ox 98.4 9.7E-08 2.1E-12 91.1 2.4 44 169-212 49-92 (464)
139 PRK06209 glutamate-1-semialdeh 98.4 1.1E-07 2.4E-12 89.8 2.5 42 170-211 35-76 (431)
140 TIGR03372 putres_am_tran putre 98.4 1E-07 2.2E-12 90.5 2.1 48 170-217 62-111 (442)
141 PRK07480 putative aminotransfe 98.4 8.8E-08 1.9E-12 91.2 1.6 48 170-217 37-86 (456)
142 PRK11522 putrescine--2-oxoglut 98.4 1.2E-07 2.6E-12 90.3 2.3 42 170-211 68-110 (459)
143 TIGR03246 arg_catab_astC succi 98.4 2E-07 4.3E-12 86.8 3.6 42 170-211 22-63 (397)
144 PLN02624 ornithine-delta-amino 98.4 1.8E-07 3.8E-12 89.4 3.3 43 169-211 61-103 (474)
145 PRK06105 aminotransferase; Pro 98.4 1.1E-07 2.4E-12 90.5 1.6 47 170-216 35-83 (460)
146 PLN02482 glutamate-1-semialdeh 98.4 1.9E-07 4.1E-12 89.4 3.1 43 170-212 86-128 (474)
147 PRK00615 glutamate-1-semialdeh 98.4 1.7E-07 3.6E-12 88.8 2.6 43 170-212 40-82 (433)
148 PLN02760 4-aminobutyrate:pyruv 98.4 1.5E-07 3.3E-12 90.7 2.4 48 170-217 76-125 (504)
149 PRK01278 argD acetylornithine 98.4 2.3E-07 5.1E-12 85.6 3.0 42 170-211 18-59 (389)
150 PF00202 Aminotran_3: Aminotra 98.3 1.1E-07 2.4E-12 87.0 0.6 48 170-217 3-52 (339)
151 PRK07046 aminotransferase; Val 98.3 2.8E-07 6.1E-12 87.7 2.8 43 169-211 61-103 (453)
152 PRK03715 argD acetylornithine 98.3 3.1E-07 6.7E-12 85.8 2.9 47 170-216 23-71 (395)
153 PRK05093 argD bifunctional N-s 98.3 6.8E-07 1.5E-11 83.2 4.1 42 170-211 27-68 (403)
154 PRK08088 4-aminobutyrate amino 98.3 4.1E-07 8.9E-12 85.5 2.6 47 170-216 28-76 (425)
155 PRK00854 rocD ornithine--oxo-a 98.3 5.6E-07 1.2E-11 83.3 3.3 48 170-217 28-77 (401)
156 TIGR00713 hemL glutamate-1-sem 98.2 5E-07 1.1E-11 84.5 2.6 42 170-211 35-76 (423)
157 PTZ00125 ornithine aminotransf 98.2 6.5E-07 1.4E-11 82.7 2.4 48 170-217 18-67 (400)
158 KOG1405|consensus 98.2 1E-06 2.2E-11 80.8 3.1 64 162-225 55-120 (484)
159 TIGR00508 bioA adenosylmethion 98.2 6.7E-07 1.5E-11 84.4 1.9 41 170-210 32-72 (427)
160 KOG1401|consensus 98.2 1.1E-06 2.3E-11 81.7 2.9 61 160-222 35-97 (433)
161 PRK02936 argD acetylornithine 98.1 1.6E-06 3.4E-11 79.6 3.0 43 169-211 15-57 (377)
162 PRK06082 4-aminobutyrate amino 98.1 1.4E-06 3E-11 83.1 2.1 42 169-211 58-99 (459)
163 TIGR01885 Orn_aminotrans ornit 98.1 2.5E-06 5.4E-11 79.2 3.7 42 170-211 24-65 (401)
164 PRK00062 glutamate-1-semialdeh 97.9 3.8E-06 8.1E-11 79.1 2.1 43 170-212 37-79 (426)
165 PRK05958 8-amino-7-oxononanoat 97.9 2.2E-05 4.8E-10 71.5 6.0 49 79-132 20-69 (385)
166 TIGR01825 gly_Cac_T_rel pyrido 97.9 1.6E-05 3.4E-10 72.8 4.5 48 81-132 15-63 (385)
167 PRK02627 acetylornithine amino 97.8 8.8E-06 1.9E-10 74.9 2.7 41 170-210 26-66 (396)
168 PRK03244 argD acetylornithine 97.8 1.1E-05 2.4E-10 74.6 3.3 41 170-210 30-70 (398)
169 PRK06148 hypothetical protein; 97.8 1.1E-05 2.3E-10 83.9 2.7 42 169-212 610-651 (1013)
170 PRK07179 hypothetical protein; 97.8 3.8E-05 8.3E-10 71.4 5.7 49 74-132 36-84 (407)
171 PRK04260 acetylornithine amino 97.7 1.8E-05 3.9E-10 72.8 2.7 41 170-211 16-56 (375)
172 cd00610 OAT_like Acetyl ornith 97.6 3.3E-05 7.2E-10 71.2 2.4 42 170-211 23-64 (413)
173 PLN02974 adenosylmethionine-8- 97.5 3.7E-05 8E-10 78.1 2.2 59 170-228 344-413 (817)
174 TIGR00707 argD acetylornithine 97.5 6.2E-05 1.4E-09 68.7 2.6 41 170-210 14-54 (379)
175 PRK06149 hypothetical protein; 97.4 6.4E-05 1.4E-09 77.8 2.6 42 169-212 571-612 (972)
176 PRK06939 2-amino-3-ketobutyrat 97.3 0.00048 1E-08 63.0 6.6 47 83-132 25-72 (397)
177 PRK07505 hypothetical protein; 97.2 0.0002 4.3E-09 66.6 2.4 41 169-212 32-73 (402)
178 PLN02822 serine palmitoyltrans 96.9 0.0013 2.7E-08 63.2 5.0 48 84-134 94-141 (481)
179 TIGR00858 bioF 8-amino-7-oxono 96.8 0.0025 5.5E-08 57.2 6.0 43 86-132 3-46 (360)
180 KOG1403|consensus 96.4 0.0017 3.7E-08 58.9 1.8 42 169-212 33-74 (452)
181 TIGR01822 2am3keto_CoA 2-amino 96.1 0.015 3.2E-07 53.4 6.6 49 81-132 19-68 (393)
182 PRK13393 5-aminolevulinate syn 96.1 0.014 3.1E-07 54.3 6.3 92 86-186 26-123 (406)
183 PRK09064 5-aminolevulinate syn 93.8 0.13 2.8E-06 47.7 5.7 33 99-134 45-78 (407)
184 TIGR01821 5aminolev_synth 5-am 91.4 0.3 6.6E-06 45.2 4.8 36 97-134 42-77 (402)
185 PRK05958 8-amino-7-oxononanoat 88.9 0.34 7.3E-06 43.9 2.8 38 169-210 26-64 (385)
186 PRK13392 5-aminolevulinate syn 83.6 1.1 2.5E-05 41.5 3.5 34 98-133 44-77 (410)
187 TIGR01825 gly_Cac_T_rel pyrido 81.1 0.86 1.9E-05 41.5 1.6 37 170-210 21-58 (385)
188 TIGR00858 bioF 8-amino-7-oxono 76.0 1.6 3.5E-05 38.9 1.8 36 171-210 5-41 (360)
189 PRK06939 2-amino-3-ketobutyrat 75.2 1.7 3.7E-05 39.6 1.7 38 170-210 29-67 (397)
190 KOG1359|consensus 69.5 9.6 0.00021 35.1 5.1 91 83-183 49-142 (417)
191 cd06454 KBL_like KBL_like; thi 68.7 5.8 0.00013 35.3 3.6 30 100-132 1-31 (349)
192 PRK07179 hypothetical protein; 63.5 7.3 0.00016 36.1 3.3 32 170-211 49-80 (407)
193 TIGR01822 2am3keto_CoA 2-amino 61.1 8.1 0.00017 35.3 3.1 37 171-210 26-63 (393)
194 COG0156 BioF 7-keto-8-aminopel 59.5 24 0.00052 33.3 6.0 33 97-132 36-69 (388)
195 PLN02955 8-amino-7-oxononanoat 51.9 15 0.00033 35.6 3.4 34 98-133 100-133 (476)
196 PLN02822 serine palmitoyltrans 49.2 10 0.00022 36.5 1.7 37 171-210 98-134 (481)
197 PHA00008 J DNA packaging prote 33.7 27 0.00057 19.9 1.1 16 87-102 10-25 (26)
198 PF04726 Microvir_J: Microviru 32.9 21 0.00046 19.8 0.7 16 87-102 9-24 (24)
199 cd00613 GDC-P Glycine cleavage 27.6 48 0.001 30.2 2.5 23 107-129 23-45 (398)
200 COG0742 N6-adenine-specific me 26.3 32 0.0007 29.2 1.0 30 96-133 41-70 (187)
201 PF05614 DUF782: Circovirus pr 26.0 41 0.00089 24.7 1.4 17 5-21 18-36 (104)
202 KOG1528|consensus 25.5 83 0.0018 29.0 3.5 47 84-131 295-348 (351)
203 PF11422 IBP39: Initiator bind 24.3 44 0.00094 28.2 1.4 16 87-102 156-171 (181)
204 PF09940 DUF2172: Domain of un 22.9 69 0.0015 30.2 2.6 29 90-119 24-52 (386)
205 smart00497 IENR1 Intron encode 21.8 1E+02 0.0022 19.5 2.6 38 90-127 2-40 (53)
206 PF03640 Lipoprotein_15: Secre 21.0 1E+02 0.0022 20.1 2.4 21 85-105 3-23 (48)
207 PF03602 Cons_hypoth95: Conser 20.7 37 0.00081 28.3 0.3 17 97-113 41-57 (183)
No 1
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.89 E-value=9.5e-24 Score=198.15 Aligned_cols=148 Identities=24% Similarity=0.308 Sum_probs=118.7
Q ss_pred CCCCcccccCCChhHHHHHHHHhccccC-Ccc-ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhc
Q psy237 50 PSHPQLVTEVPGPQTKALKQKLSQLQQS-GSV-SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 127 (236)
Q Consensus 50 ~~~~~v~~~~pgp~s~~l~~~~~~~~~~-~~~-~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~ 127 (236)
+..+++.+..++++..+++++.++++.. ... .+|+++++|+|+||||+|||+||||++|+++.++|||||+|++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~ 83 (447)
T COG0160 4 PEEPDIVTEAPGPKALELIERREEALARSYGRFRFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKR 83 (447)
T ss_pred cccccccccCCCcchHHHHHHHHHHhccccccccCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHH
Confidence 3455667778899999999998887765 334 68999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--hhh------ccccccccCC
Q psy237 128 PATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--DVY------TQISSVPLGY 199 (236)
Q Consensus 128 q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--D~~------sg~~~~~lGh 199 (236)
|++++.|++...+.+++..+++|+|.+ ..|... ..+++|+++|+||+|++++ -.. -.+....||.
T Consensus 84 q~~~~~h~~~~~~~~e~~v~~ae~L~~----~~p~~~---~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~ 156 (447)
T COG0160 84 QLAKLNHTHTRDLYYEPYVELAEKLTA----LAPGSG---LKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGR 156 (447)
T ss_pred HHHHhhcccCCcccchhHHHHHHHHHH----hCCccc---CCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCccccc
Confidence 999999988777766777788888777 356522 2369999999999999988 111 1244455666
Q ss_pred CCHHH
Q psy237 200 NHPAL 204 (236)
Q Consensus 200 ~~p~i 204 (236)
+.-.+
T Consensus 157 T~gal 161 (447)
T COG0160 157 TLGAL 161 (447)
T ss_pred chhhH
Confidence 65444
No 2
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=9.2e-23 Score=187.86 Aligned_cols=113 Identities=22% Similarity=0.204 Sum_probs=97.6
Q ss_pred HHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC
Q psy237 64 TKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF 143 (236)
Q Consensus 64 s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~ 143 (236)
++...+...+++...+.++|+++++|+|+||||.+||+||||.+|+++++||||||+|++|+++|+++++|+++ .+.++
T Consensus 6 ~~~~~~~~~~~~~~~Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn-~~~~~ 84 (404)
T COG4992 6 TAATIELFMKYLMPTYGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSN-LFYNE 84 (404)
T ss_pred HHHHHHHHHHhhhcccCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccc-ccCCh
Confidence 45667777888888888889999999999999999999999999999999999999999999999999999886 45577
Q ss_pred CCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 144 PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 144 ~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+..+++++|.+ ..| +. + +++|+|||+||+|.+++
T Consensus 85 ~~~~la~~L~~----~s~-~~---d-~vff~NSGaEA~EaAiK 118 (404)
T COG4992 85 PQAELAEKLVE----LSP-FA---D-RVFFCNSGAEANEAALK 118 (404)
T ss_pred HHHHHHHHHHh----hCc-cc---c-EEEEcCCcHHHHHHHHH
Confidence 77777777776 344 21 3 69999999999999887
No 3
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.86 E-value=2.7e-22 Score=190.28 Aligned_cols=134 Identities=45% Similarity=0.707 Sum_probs=109.6
Q ss_pred CCCCCCCcccccCCChhHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhh
Q psy237 47 LSEPSHPQLVTEVPGPQTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFD 126 (236)
Q Consensus 47 ~~~~~~~~v~~~~pgp~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~ 126 (236)
|.+|+.+.+++++|+++|++++++..+++.....++|+++++|+|+||||+|||+||||++|++++++||+||+|++|++
T Consensus 5 ~~~~~~~~~~~~~~~~~s~~l~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~ 84 (464)
T TIGR00699 5 PNEPTGPLMKTEIPGPKSKAAMKQLNEVFDARAVHFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQ 84 (464)
T ss_pred CCCCCCCccccCCCCccHHHHHHHHHhhhcccCcccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHH
Confidence 67889999999999999999999998887554457899999999999999999999999999999999999999999999
Q ss_pred cc--ccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 127 DP--ATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 127 ~q--~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+| ...+.+.. .+.+++..+++++|.+.+....|... + +++|+++|+||+|.+++
T Consensus 85 ~q~~~~~l~~~~--~~~~~~~~~la~~l~~~l~~~~p~~~---~-~v~f~~SGsEAvE~AlK 140 (464)
T TIGR00699 85 SPEMATTLINRP--ALGNFPSKDWAKILKEGILKVAPKGQ---D-QVWTGMSGSDANELAFK 140 (464)
T ss_pred HHHHHHhhcccc--cCCcHHHHHHHHHHHHhHHhhCCCCc---C-EEEEeCCcHHHHHHHHH
Confidence 96 43444332 35566667778877664444555321 2 68999999999998877
No 4
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-21 Score=183.96 Aligned_cols=149 Identities=19% Similarity=0.237 Sum_probs=115.6
Q ss_pred CCCCCcccccCCChhHHHHHHHHhccccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhc
Q psy237 49 EPSHPQLVTEVPGPQTKALKQKLSQLQQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 127 (236)
Q Consensus 49 ~~~~~~v~~~~pgp~s~~l~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~ 127 (236)
.++.|++.+++|+++|++++++.++++.... .++|+++++|+|+||||+|||+||||++|+|+.++||+||+|++|+++
T Consensus 2 ~~~~~~~~~~~~~~~s~~l~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ 81 (441)
T PRK05769 2 MPRRPRIVVELPGPKAREIIERDEKYLAQSTRRWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKE 81 (441)
T ss_pred CCCCccccccCCCccHHHHHHHHHHhhCcccccCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHH
Confidence 3567888899999999999888777766533 357899999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCC
Q psy237 128 PATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGY 199 (236)
Q Consensus 128 q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh 199 (236)
|++++.+.....+.+++..+++++|.+ ..|... ..+++|.++|+||+|.+++ +.+..+....||+
T Consensus 82 ql~~~~~~~~~~~~~~~~~~lAe~L~~----~~p~~~---~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~ 154 (441)
T PRK05769 82 QAEKFLHYSLTDFYYEPAVELAERLVE----IAPGGF---EKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGR 154 (441)
T ss_pred HHHhccCccCcccCCHHHHHHHHHHHH----hCCCCC---CCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCc
Confidence 999987765444445555566666555 445311 1158999999999999886 3334455567777
Q ss_pred CCHHH
Q psy237 200 NHPAL 204 (236)
Q Consensus 200 ~~p~i 204 (236)
..-.+
T Consensus 155 t~~~l 159 (441)
T PRK05769 155 TYGSL 159 (441)
T ss_pred cHHHH
Confidence 75544
No 5
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.83 E-value=2.6e-21 Score=182.71 Aligned_cols=145 Identities=17% Similarity=0.202 Sum_probs=113.5
Q ss_pred CcccccCCChhHHHHHHHHhccccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 53 PQLVTEVPGPQTKALKQKLSQLQQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 53 ~~v~~~~pgp~s~~l~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
..+++++|+++|++++++..++++... ...|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|+++
T Consensus 6 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~ 85 (451)
T PRK06918 6 AKVNEQIPGPKAASLLERRQNIVPKGVSNGIPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQ 85 (451)
T ss_pred cchhccCCCCCHHHHHHHHHHhhccccccCCCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHh
Confidence 356788999999999999988887643 4457899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHH
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPA 203 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~ 203 (236)
+.+.+...+.+++..+++++|.+ ..|... ..+++|+++|+||+|.+++ .-+..+....||...-.
T Consensus 86 ~~~~~~~~~~~~~~~~la~~L~~----~~p~~~---~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ 158 (451)
T PRK06918 86 YIHTGFNVMMYEPYIELAEKLAA----LAPGSF---DKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMT 158 (451)
T ss_pred ccCccccccccHHHHHHHHHHHH----hCCCCC---CCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhh
Confidence 87765434445566666666665 455321 1258999999999999887 33334555677776654
Q ss_pred H
Q psy237 204 L 204 (236)
Q Consensus 204 i 204 (236)
+
T Consensus 159 l 159 (451)
T PRK06918 159 M 159 (451)
T ss_pred h
Confidence 4
No 6
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.82 E-value=8.7e-21 Score=176.30 Aligned_cols=136 Identities=21% Similarity=0.228 Sum_probs=113.5
Q ss_pred ChhHHHHHHHHhccccCC-------ccc---cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccc
Q psy237 61 GPQTKALKQKLSQLQQSG-------SVS---LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPAT 130 (236)
Q Consensus 61 gp~s~~l~~~~~~~~~~~-------~~~---~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~ 130 (236)
.++|++|++++++++++. +.+ +|+++++|+|+||||+|||+|||++++|+.+.|||+||.|++||++|++
T Consensus 4 ~~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~ 83 (432)
T COG0001 4 FPKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLE 83 (432)
T ss_pred ccchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHH
Confidence 367999999999999871 122 8999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCH
Q psy237 131 VKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHP 202 (236)
Q Consensus 131 ~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p 202 (236)
+..... .+++...+++|.+.+ ..|..+ ++.|.+||+||.-.++. |.+..+..+.|||.+.
T Consensus 84 ~G~~fg---~Pte~Ei~~Aell~~----~~p~~e-----~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~ 151 (432)
T COG0001 84 RGLSFG---APTELEVELAELLIE----RVPSIE-----KVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDS 151 (432)
T ss_pred hcCCCC---CCCHHHHHHHHHHHH----hcCccc-----EEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccH
Confidence 975432 344445555655554 456544 47899999999988776 8888899999999999
Q ss_pred HHHHhh
Q psy237 203 ALLKIF 208 (236)
Q Consensus 203 ~i~~A~ 208 (236)
.+++|-
T Consensus 152 ~lv~ag 157 (432)
T COG0001 152 LLVKAG 157 (432)
T ss_pred HHhhcC
Confidence 999986
No 7
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=6.7e-21 Score=180.58 Aligned_cols=125 Identities=22% Similarity=0.274 Sum_probs=99.3
Q ss_pred cccccCCChhHHHHHHHHhccccCCc--cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 54 QLVTEVPGPQTKALKQKLSQLQQSGS--VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 54 ~v~~~~pgp~s~~l~~~~~~~~~~~~--~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.+.+++|+++|++++++..+++.... .++|+++++|+|+||||.|||+||||++|+++.++||+||+|++|+++|+++
T Consensus 5 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~ 84 (457)
T PRK05639 5 KIVVKPPGPKAKELIEREKRVLSPGIGVKLFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVAL 84 (457)
T ss_pred cccccCCCCCHHHHHHHHHHhhccccCcCCCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHh
Confidence 45567889999999988877766533 3468999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+.+.+...+.+++..+++++|.+ ..|... + +++|+++|+||+|.+++
T Consensus 85 ~~~~~~~~~~~~~~~~lae~L~~----~~p~~~---~-~v~f~~SGsEA~e~Alk 131 (457)
T PRK05639 85 IQHSMIGYTHSERAIRVAEKLAE----ISPIEN---P-KVLFGLSGSDAVDMAIK 131 (457)
T ss_pred ccccccCccCCHHHHHHHHHHHh----hCCCCc---C-EEEEeCchHHHHHHHHH
Confidence 87655433334444555665555 445321 2 68999999999999877
No 8
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.81 E-value=1.4e-20 Score=177.52 Aligned_cols=138 Identities=17% Similarity=0.200 Sum_probs=103.4
Q ss_pred cCCChhHHHHHHHHhccccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccccccc
Q psy237 58 EVPGPQTKALKQKLSQLQQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVN 136 (236)
Q Consensus 58 ~~pgp~s~~l~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~ 136 (236)
.+++++|.+++++..++++... .++|+++++|+|+||||+|||+||||++|+|+.+|||+||+|++|+++|++++.+..
T Consensus 13 ~~~~~~s~~~~~~~~~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~ 92 (443)
T PRK06058 13 EIPGPKSQALAERRAAAVAAGVGSTLPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTC 92 (443)
T ss_pred CCCCccHHHHHHHHHHhhccccccCCCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCcc
Confidence 4566788888888777776543 357899999999999999999999999999999999999999999999999876554
Q ss_pred CCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCH
Q psy237 137 RPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHP 202 (236)
Q Consensus 137 ~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p 202 (236)
...+.+++..+++++|.+ ..|... ..+++|.++|+||++.+++ +-+..+....||+..-
T Consensus 93 ~~~~~~~~~~~la~~l~~----~~p~~~---~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~ 159 (443)
T PRK06058 93 FMVTPYEGYVAVAEQLNR----LTPGDH---EKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNL 159 (443)
T ss_pred ccccCCHHHHHHHHHHHH----hCCCCC---CCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHH
Confidence 333344444555555554 455321 1257899999999999888 3333445556666543
No 9
>KOG1405|consensus
Probab=99.81 E-value=1e-20 Score=170.92 Aligned_cols=159 Identities=40% Similarity=0.645 Sum_probs=133.9
Q ss_pred CCCCCCcccc-cCCChhHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhh
Q psy237 48 SEPSHPQLVT-EVPGPQTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFD 126 (236)
Q Consensus 48 ~~~~~~~v~~-~~pgp~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~ 126 (236)
.||.+|.|+| .||||+|+++.+++.++.......|++.++++-|.||+|+|||++||++++++++++|||||.++++++
T Consensus 23 ~ep~gP~ikTesIPGPks~~l~kel~~v~~t~~v~F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~ 102 (484)
T KOG1405|consen 23 FEPDGPSIKTESIPGPKSQELKKELDKVQDTEAVHFFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQ 102 (484)
T ss_pred cCCCCCccccccCCCchhHHHHHHHhHhhcccceEEehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhc
Confidence 3789999999 699999999999999999998888999999999999999999999999999999999999999999988
Q ss_pred ccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchhhhhcccccc---ccCCCCHH
Q psy237 127 DPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSV---PLGYNHPA 203 (236)
Q Consensus 127 ~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~---~lGh~~p~ 203 (236)
+--..-..++++.+++.|..++++.+.+.++..+|... + .+..+..|++++|++|+-.+.-+-.. ..|..-.+
T Consensus 103 ~p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~---~-~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e 178 (484)
T KOG1405|consen 103 QPQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQ---K-QVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEE 178 (484)
T ss_pred ChHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchH---H-HHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHH
Confidence 75555567899999999999999999998888888654 2 46778899999999998544422222 45555555
Q ss_pred HHHhhhc
Q psy237 204 LLKIFDD 210 (236)
Q Consensus 204 i~~A~~~ 210 (236)
.-..+..
T Consensus 179 ~eScm~n 185 (484)
T KOG1405|consen 179 LESCMIN 185 (484)
T ss_pred HHHHHhc
Confidence 5555544
No 10
>KOG1404|consensus
Probab=99.79 E-value=5.7e-20 Score=167.72 Aligned_cols=116 Identities=19% Similarity=0.151 Sum_probs=94.4
Q ss_pred hhHHHHHHHHhccccC---CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC
Q psy237 62 PQTKALKQKLSQLQQS---GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP 138 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~---~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~ 138 (236)
+.+...++.+++.+.. .+..-|++|++|+|+||||++|++|||+++|++++++|||||+|++|+.+|+.++.|...
T Consensus 9 ~~~~~~~~~~~~~ls~~~~~~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~- 87 (442)
T KOG1404|consen 9 PSTDQVLQKRRAFLSPGLTSYYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTS- 87 (442)
T ss_pred cchhhHHHHhhhcCCcceeccccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeec-
Confidence 4444555555555443 234458999999999999999999999999999999999999999999999999988764
Q ss_pred CCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 139 ALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 139 ~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+.++|..++++.|.+ ..|+.. .+++|.|+|+||+|.+++
T Consensus 88 ~~~~~pi~~~Ae~L~s----~~P~~l----~~vfF~nsGsEANelal~ 127 (442)
T KOG1404|consen 88 GYLNPPIHDLAEALVS----KLPGDL----KVVFFVNSGSEANELALK 127 (442)
T ss_pred cccCCcHHHHHHHHHH----hCCCCc----eEEEEecCCchHHHHHHH
Confidence 5668888888888877 356543 258999999999999876
No 11
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.79 E-value=7.8e-20 Score=174.02 Aligned_cols=133 Identities=15% Similarity=0.163 Sum_probs=104.8
Q ss_pred hhHHHHHHHHhccccCC-------cc---ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 62 PQTKALKQKLSQLQQSG-------SV---SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~-------~~---~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++|+++++++++++++. .. ++|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|+++
T Consensus 51 ~~S~~l~~ra~~~~pgGv~~~~r~~~~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~ 130 (474)
T PLN02482 51 TKSEEIFKAAKELMPGGVNSPVRAFKSVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKK 130 (474)
T ss_pred hHHHHHHHHHHhhCCCCCCCcchhhcccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhh
Confidence 68999999999999872 11 468999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHH
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPA 203 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~ 203 (236)
+.+. .+.+++..+++|+|.+ ..|..+ ++.|+++|+||++.+++ +-+..+....||+.+..
T Consensus 131 ~~~~---~~~~~~~~~lAe~l~~----~~p~~~-----~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~ 198 (474)
T PLN02482 131 GTSF---GAPCLLENVLAEMVID----AVPSVE-----MVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSF 198 (474)
T ss_pred CCCC---CCCCHHHHHHHHHHHH----hCCCCC-----EEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchh
Confidence 7643 2345455556665555 455533 58999999999998876 33344566788887655
Q ss_pred HHH
Q psy237 204 LLK 206 (236)
Q Consensus 204 i~~ 206 (236)
+..
T Consensus 199 ~~~ 201 (474)
T PLN02482 199 LVK 201 (474)
T ss_pred hhh
Confidence 544
No 12
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.78 E-value=1.1e-19 Score=171.63 Aligned_cols=132 Identities=13% Similarity=0.061 Sum_probs=100.5
Q ss_pred hHHHHHHHHhccccCCc--cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCC
Q psy237 63 QTKALKQKLSQLQQSGS--VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPAL 140 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~--~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~ 140 (236)
++.+++++.++++...+ ..+|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~ 81 (443)
T PRK08360 2 KPLEIIERYSKVISPANRVTYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYG 81 (443)
T ss_pred CHHHHHHHHHHhcccccccccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccccc
Confidence 35677877777766533 3568999999999999999999999999999999999999999999999999887665444
Q ss_pred CCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCH
Q psy237 141 GVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHP 202 (236)
Q Consensus 141 ~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p 202 (236)
.+++..+++++|.+ ..|... + +++|.++|+||+|.+++ .-+..+....||+..-
T Consensus 82 ~~~~~~~la~~L~~----~~p~~~---~-~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~ 143 (443)
T PRK08360 82 FPVEPLLLAEKLIE----IAPGDN---P-KVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYG 143 (443)
T ss_pred CcHHHHHHHHHHHH----hCCCCC---C-EEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHH
Confidence 45555666666665 345321 2 58999999999999887 2223344455666543
No 13
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.77 E-value=2.2e-19 Score=168.75 Aligned_cols=131 Identities=19% Similarity=0.219 Sum_probs=102.3
Q ss_pred hhHHHHHHHHhccccCC-------cc----ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccc
Q psy237 62 PQTKALKQKLSQLQQSG-------SV----SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPAT 130 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~-------~~----~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~ 130 (236)
++|.++++++++++++. .. ++|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|++
T Consensus 4 ~~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~ 83 (428)
T PRK12389 4 TKSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAE 83 (428)
T ss_pred hhhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHH
Confidence 67899999999999862 11 46899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCH
Q psy237 131 VKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHP 202 (236)
Q Consensus 131 ~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p 202 (236)
++.+. .+.++...+++++|.+ ..|... ++.|.++|+||++.+++ ..+..+....||....
T Consensus 84 ~~~~~---~~~~~~~~~la~~l~~----~~p~~~-----~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~ 151 (428)
T PRK12389 84 NGVLY---GTPTELEIEFAKMLKE----AIPSLE-----KVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDL 151 (428)
T ss_pred hCCcc---CCCCHHHHHHHHHHHH----hCCCCc-----EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHH
Confidence 87543 3455555566666555 345432 58999999999999887 2233455567776654
Q ss_pred HH
Q psy237 203 AL 204 (236)
Q Consensus 203 ~i 204 (236)
.+
T Consensus 152 ~~ 153 (428)
T PRK12389 152 VL 153 (428)
T ss_pred HH
Confidence 44
No 14
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.77 E-value=2e-19 Score=169.91 Aligned_cols=135 Identities=16% Similarity=0.134 Sum_probs=101.2
Q ss_pred hHHHHHHHHhccccCCc--cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCC
Q psy237 63 QTKALKQKLSQLQQSGS--VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPAL 140 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~--~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~ 140 (236)
++++++++..+++.... ..+|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.....+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~ 82 (445)
T PRK08593 3 KAHQLIQEDEHYFAKSGRIKYYPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYM 82 (445)
T ss_pred hHHHHHHHHHHhhccccccCCCCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccccc
Confidence 45677777777765432 3468999999999999999999999999999999999999999999999999877654445
Q ss_pred CCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 141 GVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 141 ~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
.+++..+++++|.+ ..|... ..++.|.++|+|+++.+++ .-+..+....||...-.+
T Consensus 83 ~~~~~~~lae~L~~----~~p~~~---~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~al 147 (445)
T PRK08593 83 YHEPLVRLAKKLCE----LAPGDF---EKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSL 147 (445)
T ss_pred CCHHHHHHHHHHHH----hCCCCC---CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHH
Confidence 56566666666655 455431 1258999999999999887 222234455677664443
No 15
>PRK07482 hypothetical protein; Provisional
Probab=99.77 E-value=2e-19 Score=170.64 Aligned_cols=117 Identities=12% Similarity=0.101 Sum_probs=90.2
Q ss_pred hhHHHHHHHHhccccC-Cc-----c---ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 62 PQTKALKQKLSQLQQS-GS-----V---SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~-~~-----~---~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
.+|+++.++..+++.. .. . ..|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~ 82 (461)
T PRK07482 3 QKIDELLAWDRDHFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKEL 82 (461)
T ss_pred ccHHHHHHhhhhhccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhc
Confidence 3567777766555432 21 0 2378999999999999999999999999999999999999999999999998
Q ss_pred ccccCC-CCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 133 TFVNRP-ALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 133 ~~~~~~-~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+.+.. .+.+++..+++++|.+ ..|... + +++|.++|+||+|.+++
T Consensus 83 ~~~~~~~~~~~~~~~~lAe~L~~----~~p~~~---~-~v~f~~sGSEAve~AlK 129 (461)
T PRK07482 83 AYYHTYVGHGTEASITLSKRIID----RAPAGM---S-KVYYGLSGSDANETQIK 129 (461)
T ss_pred CccccccccCCHHHHHHHHHHHH----hCCCCc---C-EEEEeCchHHHHHHHHH
Confidence 765432 3456666666666665 355321 2 58899999999998887
No 16
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.76 E-value=3.2e-19 Score=167.66 Aligned_cols=115 Identities=12% Similarity=0.077 Sum_probs=87.1
Q ss_pred HHHHHHHhccccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC
Q psy237 65 KALKQKLSQLQQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF 143 (236)
Q Consensus 65 ~~l~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~ 143 (236)
++++++...++.... ...|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|++++.+.....+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~ 83 (425)
T PRK07495 4 TSLTDRRNAAISRGVGMTTQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYE 83 (425)
T ss_pred HHHHHHHHhhhccccCcCCCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCH
Confidence 445555544444333 3348899999999999999999999999999999999999999999999999876543334455
Q ss_pred CCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 144 PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 144 ~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+..+++++|.+ ..|... ..+++|+++|+||+|.+++
T Consensus 84 ~~~~la~~l~~----~~p~~~---~~~v~f~~SGseA~e~Alk 119 (425)
T PRK07495 84 NYVRLAERLNA----LVPGDF---AKKTIFVTTGAEAVENAVK 119 (425)
T ss_pred HHHHHHHHHHH----hCCCCC---CCEEEECCchHHHHHHHHH
Confidence 55556666555 445321 1258999999999998877
No 17
>PRK07046 aminotransferase; Validated
Probab=99.76 E-value=5.1e-19 Score=167.59 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=104.9
Q ss_pred hhHHHHHHHHhccccCCc---------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 62 PQTKALKQKLSQLQQSGS---------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~~---------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
++|.++++++++++++.. .++|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++
T Consensus 28 ~~S~~l~~ra~~~~p~g~~~~~~~~~~~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~ 107 (453)
T PRK07046 28 PRSRALAARAAQHLLGGVPMHWMNDWPTPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRG 107 (453)
T ss_pred hhhHHHHHHHHhhCCCCcccccccccCCCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhC
Confidence 679999999999998732 15689999999999999999999999999999999999999999999999987
Q ss_pred ccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 133 TFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 133 ~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
.+. .+.++...+++|++.+ ..+ .+ ++.|++||+||++.+++ +.+..+....||+.+..+
T Consensus 108 ~~~---~~~~~~~~~lAe~l~~----~~~-~~-----~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l 174 (453)
T PRK07046 108 LTT---MLPSEDAAWVGEELAR----RFG-LP-----YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVF 174 (453)
T ss_pred CCC---CCCCHHHHHHHHHHHH----HhC-CC-----EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhH
Confidence 543 3345555666666665 233 22 58999999999998877 344456667888866555
Q ss_pred HH
Q psy237 205 LK 206 (236)
Q Consensus 205 ~~ 206 (236)
..
T Consensus 175 ~~ 176 (453)
T PRK07046 175 VD 176 (453)
T ss_pred hh
Confidence 43
No 18
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.75 E-value=4.7e-19 Score=168.09 Aligned_cols=119 Identities=16% Similarity=0.027 Sum_probs=92.6
Q ss_pred CChhHHHHHHHHhccccC-Cc------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 60 PGPQTKALKQKLSQLQQS-GS------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 60 pgp~s~~l~~~~~~~~~~-~~------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
|.-.++++.++..+++.. .. ...|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l 88 (460)
T PRK06916 9 PSYTYEELSEKNKAYVWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKI 88 (460)
T ss_pred CCCChHHHHHHHhhccccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhC
Confidence 333456777776666432 11 24589999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 133 TFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 133 ~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+.+...+.+++..+++++|.+ ..|... + +++|+++|+||++.+++
T Consensus 89 ~~~~~~~~~~~~~~~lae~L~~----~~p~~~---~-~v~f~~SGseAve~Alk 134 (460)
T PRK06916 89 AHSTLLGLANVPSILLAEKLIE----VVPEGL---K-KVFYSDSGATAVEIAIK 134 (460)
T ss_pred CCccccccCCHHHHHHHHHHHH----hCCCCC---C-EEEEeCCcHHHHHHHHH
Confidence 7765545566666666666665 345321 2 58999999999998776
No 19
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.75 E-value=5.6e-19 Score=165.64 Aligned_cols=116 Identities=14% Similarity=0.094 Sum_probs=89.8
Q ss_pred HHHHHHHHhccccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCC
Q psy237 64 TKALKQKLSQLQQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGV 142 (236)
Q Consensus 64 s~~l~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~ 142 (236)
+.+++++..++++... ..+|+++++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+.....+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~ 82 (421)
T PRK06777 3 NSELNQRRLEATPRGVGVMCDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPY 82 (421)
T ss_pred hHHHHHHHHHhcccccCcCCCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccccccCC
Confidence 4566777666665532 234789999999999999999999999999999999999999999999999987665434455
Q ss_pred CCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 143 FPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 143 ~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++..+++++|.+ ..|... ..++.|.++|+||+|.+++
T Consensus 83 ~~~~~la~~l~~----~~p~~~---~~~~~f~~sGseA~e~Alk 119 (421)
T PRK06777 83 ASYVTLAERINA----LAPIDG---PAKTAFFTTGAEAVENAVK 119 (421)
T ss_pred hHHHHHHHHHHH----hCCCCC---CceEEEeCCcHHHHHHHHH
Confidence 555566666655 344211 1157889999999999887
No 20
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.75 E-value=7.6e-19 Score=165.57 Aligned_cols=130 Identities=13% Similarity=0.055 Sum_probs=99.8
Q ss_pred hhHHHHHHHHhccccCC-------cc---ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 62 PQTKALKQKLSQLQQSG-------SV---SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~-------~~---~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++|+++++++++++++. .. ++|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|+++
T Consensus 5 ~~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~ 84 (433)
T PRK00615 5 QEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAER 84 (433)
T ss_pred HHHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHh
Confidence 67899999999999872 22 478999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCH
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHP 202 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p 202 (236)
+... .+.+++..+++++|.+ ..|... .++.|.++|+||++.+++ .-+..+....||+.+.
T Consensus 85 ~~~~---~~~~~~~~~la~~L~~----~~~~~~----~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~ 152 (433)
T PRK00615 85 GTSY---GLTSEQEILFAEELFS----YLGLED----HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADT 152 (433)
T ss_pred CCCC---CCCCHHHHHHHHHHHH----hCCCCc----CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcc
Confidence 6532 3445555566666655 344321 258999999999998877 1222344456666543
No 21
>PRK06062 hypothetical protein; Provisional
Probab=99.75 E-value=7.6e-19 Score=166.27 Aligned_cols=115 Identities=17% Similarity=0.153 Sum_probs=91.0
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
+.|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+++. .+.+++..+++++|.+ ..
T Consensus 34 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~lae~L~~----~~ 108 (451)
T PRK06062 34 INPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP-AHANDARSEAARLIAE----RA 108 (451)
T ss_pred CCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC-ccCCHHHHHHHHHHHH----hC
Confidence 468899999999999999999999999999999999999999999999999887664 4556666677777666 34
Q ss_pred CceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
|... + +++|+++|+||++.+++ .-+..+....||...-.+
T Consensus 109 p~~~---~-~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~al 156 (451)
T PRK06062 109 PGDL---S-KVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAI 156 (451)
T ss_pred CCCC---C-EEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHH
Confidence 5421 2 58999999999999877 223334455677765444
No 22
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.74 E-value=7e-19 Score=165.12 Aligned_cols=134 Identities=18% Similarity=0.233 Sum_probs=95.5
Q ss_pred HHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCC
Q psy237 66 ALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPS 145 (236)
Q Consensus 66 ~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~ 145 (236)
.++++....+..+..++|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+++...+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~ 84 (425)
T PRK09264 5 DIFERLESEVRSYCRSFPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAK 84 (425)
T ss_pred hHHHHHHHHHhccCCCCCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHH
Confidence 45666655555555567899999999999999999999999999999999999999999999999876655444456566
Q ss_pred CChhhhhHhhhhhccCceeeeeeeeeee-cceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 146 GDWPQLLENVLLKQSGSVSLFVDYQKSF-GNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 146 ~elAE~Lae~Ll~~ap~~~~~i~~~~~~-G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
.+++++|.+.+. .|... ..++.| +++|+||+|.+++ +-+..+....||...-.+
T Consensus 85 ~~lae~l~~~~~--~~~~~---~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~l 147 (425)
T PRK09264 85 REFLETFEETIL--KPRGL---DYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSL 147 (425)
T ss_pred HHHHHHHHHhhc--CCcCC---CceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHH
Confidence 667776666221 22111 113444 6899999998877 222234445566654333
No 23
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.74 E-value=8.3e-19 Score=164.08 Aligned_cols=128 Identities=14% Similarity=0.160 Sum_probs=90.9
Q ss_pred hccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhh
Q psy237 72 SQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQL 151 (236)
Q Consensus 72 ~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~ 151 (236)
..++..+..++|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|+++..+.+...+.+++..+++++
T Consensus 7 ~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~ 86 (412)
T TIGR02407 7 ESEVRSYCRSFPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLET 86 (412)
T ss_pred HHHHhccCCCCCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHH
Confidence 33444444567899999999999999999999999999999999999999999999999766655444445666667777
Q ss_pred hHhhhhhccCc-eeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 152 LENVLLKQSGS-VSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 152 Lae~Ll~~ap~-~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
|.+.+. .|. .. ..+.+++++|+|++|.+++ .-+-.+....||...-.+
T Consensus 87 l~~~~~--~~~~~~---~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al 143 (412)
T TIGR02407 87 FNEIIL--KPRGLD---YKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSL 143 (412)
T ss_pred HHHhcc--CccCCC---ceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHH
Confidence 666211 221 11 1123446999999998877 222334455666654433
No 24
>PRK07678 aminotransferase; Validated
Probab=99.74 E-value=1.2e-18 Score=164.85 Aligned_cols=114 Identities=19% Similarity=0.181 Sum_probs=89.2
Q ss_pred hHHHHHHHHhccccCC---cc-ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC
Q psy237 63 QTKALKQKLSQLQQSG---SV-SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP 138 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~---~~-~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~ 138 (236)
+|.+++++..+++... +. ..|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~- 84 (451)
T PRK07678 6 QTDELLAKDEQYVWHGMKPYNPNATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL- 84 (451)
T ss_pred CHHHHHHHhhcccCCCccccccCCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc-
Confidence 4677777766664321 22 247899999999999999999999999999999999999999999999998876543
Q ss_pred CCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 139 ALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 139 ~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+.+++..+++++|.+ ..|... +++|+++|+||++.+++
T Consensus 85 ~~~~~~~~~lae~l~~----~~~~~~-----~v~f~~sGseA~e~Alk 123 (451)
T PRK07678 85 TQSHEPAIKLAEKLNE----WLGGEY-----VIFFSNSGSEANETAFK 123 (451)
T ss_pred ccCCHHHHHHHHHHHH----hCCCCC-----EEEEeCCcHHHHHHHHH
Confidence 3456666666666665 345422 58899999999998776
No 25
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.74 E-value=1.3e-18 Score=161.12 Aligned_cols=113 Identities=19% Similarity=0.253 Sum_probs=90.8
Q ss_pred hHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCC
Q psy237 63 QTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGV 142 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~ 142 (236)
++++++++..+++.....++|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.++ .+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~-~~~~ 81 (396)
T PRK04073 3 KSEKIIELTNHYGAHNYHPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR-AFHS 81 (396)
T ss_pred hHHHHHHHHHHhcccccCCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc-ccCC
Confidence 567888887777766556778999999999999999999999999999999999999999999999998876553 3444
Q ss_pred CCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 143 FPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 143 ~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++..+++++|.+ ..+. + +..+.++|+||++.+++
T Consensus 82 ~~~~~l~~~l~~----~~~~-~-----~~~~~~SGseA~e~Alk 115 (396)
T PRK04073 82 DQLGPWYEKVAK----LTGK-D-----MVLPMNTGAEAVETAIK 115 (396)
T ss_pred HHHHHHHHHHHh----cCCC-C-----eEEEcCChHHHHHHHHH
Confidence 455555555555 3332 2 47889999999998766
No 26
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.73 E-value=8.1e-19 Score=164.55 Aligned_cols=97 Identities=18% Similarity=0.160 Sum_probs=86.0
Q ss_pred ceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCc
Q psy237 83 FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGS 162 (236)
Q Consensus 83 p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~ 162 (236)
|.+|++|+|+||||.|||+|||.+||+|++++||+||+|.+|+++|++++.|++...+.+.|..+++++|.+ .+|.
T Consensus 27 ~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~----~aP~ 102 (449)
T COG0161 27 PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAE----LAPE 102 (449)
T ss_pred ceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHH----hCCC
Confidence 788999999999999999999999999999999999999999999999999998888888887777777766 4663
Q ss_pred eeeeeeeeeeecceEEeccccchh
Q psy237 163 VSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 163 ~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.++ + +++|.++|+|++|.+++
T Consensus 103 ~~l--~-~vFf~~sGSeAvEtAlK 123 (449)
T COG0161 103 GGL--D-HVFFTDSGSEAVETALK 123 (449)
T ss_pred CCc--c-EEEEeCCchHHHHHHHH
Confidence 321 2 79999999999999887
No 27
>PRK05965 hypothetical protein; Provisional
Probab=99.73 E-value=1.3e-18 Score=164.97 Aligned_cols=97 Identities=14% Similarity=0.192 Sum_probs=79.7
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhcc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~a 160 (236)
.|+++++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+.... .+.+++..+++++|.+ ..
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~----~~ 103 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAE----RA 103 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHh----hC
Confidence 478999999999999999999999999999999999999999999999998765532 3445556666666665 45
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + +++|.++|+||+|.+++
T Consensus 104 p~~~---~-~v~f~~sGSEAve~AlK 125 (459)
T PRK05965 104 PGSL---N-HVYFTLGGSDAVDSAVR 125 (459)
T ss_pred CCCc---C-EEEEeCChhHHHHHHHH
Confidence 5321 2 58999999999999886
No 28
>PRK06541 hypothetical protein; Provisional
Probab=99.73 E-value=1.6e-18 Score=164.38 Aligned_cols=116 Identities=13% Similarity=0.033 Sum_probs=89.6
Q ss_pred hHHHHHHHHhcccc-CCc---c--c-cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccc
Q psy237 63 QTKALKQKLSQLQQ-SGS---V--S-LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFV 135 (236)
Q Consensus 63 ~s~~l~~~~~~~~~-~~~---~--~-~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~ 135 (236)
+|+++.++.++++. ++. . . -|+++++|+|+||||.|||+||||++|+++++|||+||+|++|+++|++++.+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~ 87 (460)
T PRK06541 8 SDTDLQALAKRHLWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF 87 (460)
T ss_pred cHHHHHHHhhcccccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCc
Confidence 35667776566653 211 1 1 267899999999999999999999999999999999999999999999998776
Q ss_pred cCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 136 NRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 136 ~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
....+.+++..+++++|.+ ..|... + +++|.++|+||+|.+++
T Consensus 88 ~~~~~~~~~~~~la~~l~~----~~p~~~---~-~v~f~~sGseAve~Alk 130 (460)
T PRK06541 88 PLWSYAHPPAIELAERLAA----LAPGDL---N-RVFFTTGGSEAVESAWK 130 (460)
T ss_pred cccccCCHHHHHHHHHHHH----hCCCCc---C-EEEEcCCcHHHHHHHHH
Confidence 5444556666666666665 344321 2 58999999999998776
No 29
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.73 E-value=1.6e-18 Score=162.35 Aligned_cols=120 Identities=18% Similarity=0.113 Sum_probs=91.7
Q ss_pred CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhh
Q psy237 78 GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLL 157 (236)
Q Consensus 78 ~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll 157 (236)
...++|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|++++.+.....+.+++..+++++|.+
T Consensus 11 ~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~--- 87 (420)
T TIGR00700 11 VGVTLPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNR--- 87 (420)
T ss_pred cCCCCCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHH---
Confidence 34567899999999999999999999999999999999999999999999999987655433445555566666555
Q ss_pred hccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 158 KQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 158 ~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
..|... ..++.|.++|+||+|.+++ .-+..+....||...-.+
T Consensus 88 -~~p~~~---~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~ 138 (420)
T TIGR00700 88 -IAPGSG---PKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTM 138 (420)
T ss_pred -hCCCCC---CCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHH
Confidence 455321 1258999999999999887 223335556777765544
No 30
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.73 E-value=2.1e-18 Score=162.28 Aligned_cols=109 Identities=17% Similarity=0.135 Sum_probs=85.3
Q ss_pred HHHHHHHHhccccCC-------c----cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 64 TKALKQKLSQLQQSG-------S----VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 64 s~~l~~~~~~~~~~~-------~----~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
|.+|++++.+++++. . .+.|+++++|+|+||||+|||+||||++|+|+.+|||+||+|++|+++|++++
T Consensus 1 s~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~ 80 (431)
T PRK06209 1 SQLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDG 80 (431)
T ss_pred CHHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhC
Confidence 467888888888861 1 13568999999999999999999999999999999999999999999999986
Q ss_pred ccccCCCCCCCCC--CChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 133 TFVNRPALGVFPS--GDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 133 ~~~~~~~~~~~~~--~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.. +.+... .+++++|.+ ..|... +++|+++|+||++.+++
T Consensus 81 ~~-----~~~~~~~~~~la~~l~~----~~p~~~-----~v~f~~sGseA~e~Alk 122 (431)
T PRK06209 81 CN-----FTRPSAIELDAAESFLE----LIDGAD-----MVKFCKNGSDATSAAVR 122 (431)
T ss_pred cC-----CCCCCHHHHHHHHHHHH----hCCccc-----eEEEecCHHHHHHHHHH
Confidence 52 222222 234555554 455432 58899999999998877
No 31
>PRK07483 hypothetical protein; Provisional
Probab=99.72 E-value=1.9e-18 Score=163.19 Aligned_cols=103 Identities=14% Similarity=0.133 Sum_probs=82.5
Q ss_pred cCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhh
Q psy237 76 QSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENV 155 (236)
Q Consensus 76 ~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~ 155 (236)
......+|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+++...+.+++..+++++|.+
T Consensus 6 ~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~- 84 (443)
T PRK07483 6 HRSPRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVA- 84 (443)
T ss_pred cccccCCCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHH-
Confidence 3344457899999999999999999999999999999999999999999999999987655433455555556666555
Q ss_pred hhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 156 LLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 156 Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..|... + +++|.++|+||+|.+++
T Consensus 85 ---~~p~~~---~-~v~f~~sGsEAve~Alk 108 (443)
T PRK07483 85 ---AAPAGL---E-HVYFVSGGSEAVEAALK 108 (443)
T ss_pred ---hCCCCC---C-EEEEcCCcHHHHHHHHH
Confidence 345321 2 58999999999998876
No 32
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.72 E-value=3.3e-18 Score=160.43 Aligned_cols=114 Identities=16% Similarity=0.114 Sum_probs=86.6
Q ss_pred HHHHHHhccccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCC
Q psy237 66 ALKQKLSQLQQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFP 144 (236)
Q Consensus 66 ~l~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~ 144 (236)
+++++...++.... ..+|+++++|+|+||||+|||+||||++|+|++++||+||+|++|+++|++++.+.+...+.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~ 84 (421)
T PRK09792 5 EFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYES 84 (421)
T ss_pred HHHHHHHhhcccccccCCCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHH
Confidence 44554444443322 33468999999999999999999999999999999999999999999999998776544445656
Q ss_pred CCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 145 SGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 145 ~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+++++|.+ ..|... ..++.|.++|+||+|.+++
T Consensus 85 ~~~la~~l~~----~~p~~~---~~~~~f~~sGseA~e~Alk 119 (421)
T PRK09792 85 YVTLAEKINA----LAPVSG---QAKTAFFTTGAEAVENAVK 119 (421)
T ss_pred HHHHHHHHHH----hCCCCC---CceEEEeCChHHHHHHHHH
Confidence 6666666655 344221 1258899999999998877
No 33
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.72 E-value=2.1e-18 Score=161.39 Aligned_cols=98 Identities=18% Similarity=0.142 Sum_probs=81.2
Q ss_pred ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhh
Q psy237 79 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLK 158 (236)
Q Consensus 79 ~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~ 158 (236)
..++|+++++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+... .+.+++..+++++|.+
T Consensus 19 ~~~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~L~~---- 93 (408)
T PRK04612 19 YRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN-VFYSAPPLKLAEELVT---- 93 (408)
T ss_pred cCCCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc-ccCCHHHHHHHHHHHh----
Confidence 45678999999999999999999999999999999999999999999999999877653 3455566666666665
Q ss_pred ccCceeeeeeeeeeecceEEeccccchh
Q psy237 159 QSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 159 ~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..|... +++|+++|+|++|.+++
T Consensus 94 ~~~~~~-----~v~f~~sGseA~e~Alk 116 (408)
T PRK04612 94 ASRFAE-----KVFLCNSGTEANEAAIK 116 (408)
T ss_pred hCCCCC-----EEEEcCchHHHHHHHHH
Confidence 344322 58999999999998875
No 34
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.72 E-value=2.9e-18 Score=160.63 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=80.5
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
+.|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+.....+.+++..+++++|.+ ..
T Consensus 23 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~----~~ 98 (423)
T PRK05964 23 PPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVA----LT 98 (423)
T ss_pred CCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHH----hC
Confidence 46899999999999999999999999999999999999999999999999987655334556555666666655 35
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + ++.|+++|+||++.+++
T Consensus 99 p~~~---~-~v~f~~sGseA~e~A~k 120 (423)
T PRK05964 99 PGGL---D-HVFFSDSGSVAVEVALK 120 (423)
T ss_pred CCCC---C-EEEEeCCcHHHHHHHHH
Confidence 5321 2 58999999999998876
No 35
>PLN02624 ornithine-delta-aminotransferase
Probab=99.72 E-value=5.2e-18 Score=161.48 Aligned_cols=114 Identities=18% Similarity=0.169 Sum_probs=92.4
Q ss_pred hhHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCC
Q psy237 62 PQTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALG 141 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~ 141 (236)
..++.++++.++++...+.++|+++++|+|+||||+||++||||++|++++++||+||+|++|+++|++++.+.+. .+.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~-~~~ 115 (474)
T PLN02624 37 DSSAHLIELEEKYSAHNYHPIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR-AFY 115 (474)
T ss_pred cchHHHHHHHHHhhccccCCCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc-ccC
Confidence 3456788887777666555678999999999999999999999999999999999999999999999999876654 355
Q ss_pred CCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 142 VFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+++..+++++|.+ ..+ .+ ++.+.++|+|+++.+++
T Consensus 116 ~~~~~~la~~L~~----~~~-~~-----~~~f~~SGseA~e~Alk 150 (474)
T PLN02624 116 NDKFPEFAEYLTS----MFG-YD-----MVLPMNTGAEGVETAIK 150 (474)
T ss_pred CHHHHHHHHHHHh----hcC-CC-----eEEEeCChHHHHHHHHH
Confidence 6666666666666 233 22 47889999999998875
No 36
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.72 E-value=3.3e-18 Score=160.67 Aligned_cols=115 Identities=17% Similarity=0.124 Sum_probs=88.3
Q ss_pred HHHHHHHHhccccCCccc-cc-eeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCC
Q psy237 64 TKALKQKLSQLQQSGSVS-LF-VDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALG 141 (236)
Q Consensus 64 s~~l~~~~~~~~~~~~~~-~p-~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~ 141 (236)
+.+++++...++.+.... +| +++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+.+...+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~ 84 (433)
T PRK08117 5 WSDLVERYPQLLAPALAKDHPNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIY 84 (433)
T ss_pred HHHHHHHHHHHhhhhccccCCCceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccC
Confidence 456677766666553222 43 8899999999999999999999999999999999999999999999988765533344
Q ss_pred CCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 142 VFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++...+++++|.+ ..|+.. + ++.|.++|+||++.+++
T Consensus 85 ~~~~~~la~~L~~----~~~~~~---~-~v~f~~SGseA~e~Alk 121 (433)
T PRK08117 85 YESILKLAEELAE----ITPGGL---D-CFFFSNSGAEAIEGALK 121 (433)
T ss_pred CHHHHHHHHHHHH----hCCCCC---C-EEEEeCcHHHHHHHHHH
Confidence 5555555655555 454322 2 58899999999999886
No 37
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=3.2e-18 Score=160.77 Aligned_cols=98 Identities=17% Similarity=0.064 Sum_probs=81.2
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
.+|+++++|+|+||||.|||+||||++|+++.+|||+||+|++|+++|++++.++....+.+++..+++++|.+ ..
T Consensus 21 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~----~~ 96 (422)
T PRK05630 21 VRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLN----LT 96 (422)
T ss_pred CCCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHh----hC
Confidence 46889999999999999999999999999999999999999999999999987765434556666666666665 34
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + +++|+++|+||+|.+++
T Consensus 97 p~~~---~-~v~f~~SGseA~e~Alk 118 (422)
T PRK05630 97 DNGL---D-HVFYSDSGSVSVEVAIK 118 (422)
T ss_pred CCCc---C-EEEEeCCcHHHHHHHHH
Confidence 4311 2 58999999999999876
No 38
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.71 E-value=7e-18 Score=160.05 Aligned_cols=136 Identities=20% Similarity=0.175 Sum_probs=95.0
Q ss_pred HHHHHHHHhcc--ccC-CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCC
Q psy237 64 TKALKQKLSQL--QQS-GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPAL 140 (236)
Q Consensus 64 s~~l~~~~~~~--~~~-~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~ 140 (236)
++.++++..++ ... +..++|+++++|+|+||||.|||+||||++|+++.++||+||+|++|+++|+++..+.+...+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~ 98 (459)
T PRK06931 19 NETYLARQAEFESNVRSYPRKLPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDL 98 (459)
T ss_pred hHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccccc
Confidence 44666665433 222 223578999999999999999999999999999999999999999999999987543332234
Q ss_pred CCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 141 GVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 141 ~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
.++...+++++|.+ ..|..... ...+++.++|+||+|.+++ +-+..+....||+..-.+
T Consensus 99 ~~~~~~~lAe~L~~----~~p~~~~~-~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~al 165 (459)
T PRK06931 99 TTPLKDAFSEYLLS----LLPGQGKE-YCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGAL 165 (459)
T ss_pred CCHHHHHHHHHHHH----hCCCcccc-ceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHH
Confidence 45555556665554 45532100 0135777999999999887 334445566777765544
No 39
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.71 E-value=3.6e-18 Score=161.13 Aligned_cols=118 Identities=19% Similarity=0.112 Sum_probs=87.1
Q ss_pred cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 80 VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 80 ~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
.++|+++++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+.+...+.++...+++++|.+ .
T Consensus 19 ~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~----~ 94 (442)
T TIGR00709 19 RKLPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLN----I 94 (442)
T ss_pred cCCCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHH----h
Confidence 456889999999999999999999999999999999999999999999999877665444555555666666655 3
Q ss_pred cCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCH
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHP 202 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p 202 (236)
.|..... ..+++++++|+||+|.+++ .-+..+....||...-
T Consensus 95 ~p~~~~~-~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~ 144 (442)
T TIGR00709 95 IPKRKMD-YKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIG 144 (442)
T ss_pred CCCcCCC-ccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHH
Confidence 4432000 1135667999999999877 2233344455665543
No 40
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=5.1e-18 Score=160.79 Aligned_cols=97 Identities=14% Similarity=0.132 Sum_probs=81.3
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccC
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSG 161 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap 161 (236)
.|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.....+.+++..+++++|.+ ..|
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~----~~p 111 (453)
T PRK06943 36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAA----LTG 111 (453)
T ss_pred CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHH----hCC
Confidence 4789999999999999999999999999999999999999999999999987766545566666666666665 344
Q ss_pred ceeeeeeeeeeecceEEeccccchh
Q psy237 162 SVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 162 ~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
... + +++|+++|+||+|.+++
T Consensus 112 ~~~---~-~v~f~~sGseAve~AlK 132 (453)
T PRK06943 112 GTL---G-HAFFASDGASAVEIALK 132 (453)
T ss_pred CCC---C-EEEEeCCCHHHHHHHHH
Confidence 321 2 58999999999999877
No 41
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=6.4e-18 Score=160.88 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=89.1
Q ss_pred hhHHHHHHHHhccc-cCCcc------cc-ceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 62 PQTKALKQKLSQLQ-QSGSV------SL-FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 62 p~s~~l~~~~~~~~-~~~~~------~~-p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
+.++++.++..+++ .+... .+ |+.+++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~ 97 (472)
T PRK08742 18 QTAEHWRQRDLAVLWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELE 97 (472)
T ss_pred CcHHHHHHhhhcccccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCC
Confidence 34566666655553 22111 22 367999999999999999999999999999999999999999999999887
Q ss_pred cccCCCCCCCCCCChhhhhHhhhhhccCce----eeeeeeeeeecceEEeccccchh
Q psy237 134 FVNRPALGVFPSGDWPQLLENVLLKQSGSV----SLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 134 ~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~----~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+.....+.+++..+++++|.+ ..|.. .+ + +++|.++|+||+|.+++
T Consensus 98 ~~~~~~~~~~~~~~lae~L~~----~~p~~~~~~~~--~-~v~f~~sGSEAvE~AlK 147 (472)
T PRK08742 98 QVMLAGFTHEPAVQLAEQLLA----IAPRQDGRAPL--S-KVFYADNGSAGVEVALK 147 (472)
T ss_pred CccccccCCHHHHHHHHHHHH----hCCCcccCCCC--C-EEEEeCCchHHHHHHHH
Confidence 765545666666667776665 34421 11 2 68999999999998876
No 42
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.71 E-value=4.4e-18 Score=160.19 Aligned_cols=95 Identities=15% Similarity=0.094 Sum_probs=79.0
Q ss_pred eeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCce
Q psy237 84 VDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSV 163 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~ 163 (236)
+++++|+|+||||.|||+||||++|+|+.++||+||+|++|+++|++++.+.....+.+++..+++++|.+ ..|..
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~----~~p~~ 103 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLE----ILPPS 103 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHh----hCCCC
Confidence 46999999999999999999999999999999999999999999999987765444556666666766665 34532
Q ss_pred eeeeeeeeeecceEEeccccchh
Q psy237 164 SLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 164 ~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
. + +++|+++|+||+|.+++
T Consensus 104 ~---~-~v~f~~sGseAve~Alk 122 (429)
T PRK06173 104 L---N-KIFFADSGSVAVEVAMK 122 (429)
T ss_pred c---C-EEEEeCCchHHHHHHHH
Confidence 1 2 68999999999999876
No 43
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=9.5e-18 Score=159.39 Aligned_cols=136 Identities=16% Similarity=0.181 Sum_probs=93.2
Q ss_pred HHHHHHHHhcc--ccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCC
Q psy237 64 TKALKQKLSQL--QQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPAL 140 (236)
Q Consensus 64 s~~l~~~~~~~--~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~ 140 (236)
++.++++..++ ....+ .++|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|+++..+.....+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~ 103 (464)
T PRK06938 24 NSPLLERQSRRESNARSYPRRIPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDL 103 (464)
T ss_pred HHHHHHHHHhhhhhccccccCCCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccccc
Confidence 34566665433 22222 3578999999999999999999999999999999999999999999999986443332245
Q ss_pred CCCCCCChhhhhHhhhhhccCceeeeeeeeeee-cceEEeccccchh--------hhhccccccccCCCCHHH
Q psy237 141 GVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSF-GNYLVDVDGNHIL--------DVYTQISSVPLGYNHPAL 204 (236)
Q Consensus 141 ~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~-G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~i 204 (236)
.++...+++++|.+ ..|... ....++.+ .++|+||++.+++ ..+..+....||...-.+
T Consensus 104 ~~~~~~~la~~L~~----~~p~~~-~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~al 171 (464)
T PRK06938 104 TTPVKDQFVQDLFA----SLPEAF-AREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGAL 171 (464)
T ss_pred CCHHHHHHHHHHHH----hCcccc-cccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHH
Confidence 56566666666655 344211 00013444 5899999999877 223334555677665444
No 44
>PRK06105 aminotransferase; Provisional
Probab=99.70 E-value=5.8e-18 Score=160.63 Aligned_cols=98 Identities=15% Similarity=0.104 Sum_probs=79.2
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhcc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~a 160 (236)
.|+++++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+.+.. .+.+++..+++++|.+ ..
T Consensus 30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~----~~ 105 (460)
T PRK06105 30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVA----MA 105 (460)
T ss_pred CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHH----hC
Confidence 588999999999999999999999999999999999999999999999998765432 2345555556665555 45
Q ss_pred CceeeeeeeeeeecceEEeccccchhh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHILD 187 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~lD 187 (236)
|... + +++|.++|+||+|.+++=
T Consensus 106 p~~~---~-~v~f~~SGseAve~AlKl 128 (460)
T PRK06105 106 PVPM---S-KVFFTNSGSEANDTVVKL 128 (460)
T ss_pred CCCC---C-EEEEeCCcHHHHHHHHHH
Confidence 5321 2 589999999999998873
No 45
>PRK12403 putative aminotransferase; Provisional
Probab=99.70 E-value=7e-18 Score=160.05 Aligned_cols=97 Identities=16% Similarity=0.034 Sum_probs=77.9
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhcc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~a 160 (236)
.|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.+.. ...+++..+++++|.+ ..
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~----~~ 111 (460)
T PRK12403 36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFS----LL 111 (460)
T ss_pred CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHH----hC
Confidence 578999999999999999999999999999999999999999999999998765432 2234445555665555 44
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + ++.+.++|+||++.+++
T Consensus 112 p~~~---~-~v~f~~SGseA~e~Aik 133 (460)
T PRK12403 112 PGHY---S-HAIYTNSGSEANEVLIR 133 (460)
T ss_pred CCCc---C-EEEEeCCcHHHHHHHHH
Confidence 5321 2 58899999999998776
No 46
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.70 E-value=4.8e-18 Score=160.55 Aligned_cols=98 Identities=16% Similarity=0.130 Sum_probs=81.5
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
+.|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.+...+.+++..+++++|.+ ..
T Consensus 30 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~----~~ 105 (445)
T PRK09221 30 AAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAE----LA 105 (445)
T ss_pred CCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHH----hC
Confidence 45789999999999999999999999999999999999999999999999987766544556666666666665 34
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + +++|.++|+|++|.+++
T Consensus 106 p~~~---~-~v~f~~sGseAve~Alk 127 (445)
T PRK09221 106 PGGL---D-HVFFTNSGSESVDTALK 127 (445)
T ss_pred CCCC---C-EEEEeCCcHHHHHHHHH
Confidence 5321 2 58999999999999876
No 47
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.70 E-value=5.1e-18 Score=159.73 Aligned_cols=95 Identities=15% Similarity=0.069 Sum_probs=78.7
Q ss_pred eeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCce
Q psy237 84 VDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSV 163 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~ 163 (236)
+.+++|+|+||||.|||+||||++|+|+++|||+||+|++|+++|++++.+.....+.+++..+++++|.+ ..|..
T Consensus 27 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~----~~p~~ 102 (428)
T PRK07986 27 YPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVA----MTPQP 102 (428)
T ss_pred eeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHh----hCCCC
Confidence 67999999999999999999999999999999999999999999999987765434456666666666665 34532
Q ss_pred eeeeeeeeeecceEEeccccchh
Q psy237 164 SLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 164 ~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
. + ++++.++|+||+|.+++
T Consensus 103 ~---~-~v~f~~SGsEAve~Alk 121 (428)
T PRK07986 103 L---E-CVFLADSGSVAVEVAMK 121 (428)
T ss_pred c---C-EEEEeCCcHHHHHHHHH
Confidence 1 2 68999999999998776
No 48
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.69 E-value=5.5e-18 Score=160.07 Aligned_cols=98 Identities=13% Similarity=0.089 Sum_probs=80.6
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
+.|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.....+.+++..+++++|.+ ..
T Consensus 27 ~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~----~~ 102 (442)
T PRK13360 27 KAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAE----IA 102 (442)
T ss_pred CCCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHH----hC
Confidence 35789999999999999999999999999999999999999999999999887665444556565666666655 45
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + +++|.++|+||+|.+++
T Consensus 103 p~~~---~-~v~f~~sGseA~e~Alk 124 (442)
T PRK13360 103 PGGL---N-HVFFTNSGSESVDTALK 124 (442)
T ss_pred CCCC---C-EEEEeCCcHHHHHHHHH
Confidence 5321 2 58899999999998876
No 49
>PRK07036 hypothetical protein; Provisional
Probab=99.69 E-value=1e-17 Score=159.14 Aligned_cols=98 Identities=14% Similarity=0.129 Sum_probs=80.8
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCC-CCCCCCCChhhhhHhhhhhc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPA-LGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~-~~~~~~~elAE~Lae~Ll~~ 159 (236)
..|+++++|+|+||||+|||+||||++|++++++||+||+|++|+++|++++.+..... +.+++..+++++|.+ .
T Consensus 32 ~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~----~ 107 (466)
T PRK07036 32 EGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAE----L 107 (466)
T ss_pred CCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHH----h
Confidence 35789999999999999999999999999999999999999999999999887655432 556666666666665 3
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.|... + +++|.++|+||++.+++
T Consensus 108 ~p~~~---~-~v~f~~sGseAve~Alk 130 (466)
T PRK07036 108 APGDL---N-HVFLTTGGSTAVDSALR 130 (466)
T ss_pred CCCCc---C-EEEEeCCchHHHHHHHH
Confidence 45421 2 58999999999999877
No 50
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.69 E-value=1.5e-17 Score=155.19 Aligned_cols=112 Identities=19% Similarity=0.162 Sum_probs=89.7
Q ss_pred hHHHHHHHHhccccCCc----------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 63 QTKALKQKLSQLQQSGS----------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~----------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
+|+++++++++++++.. .++|+++++|+|+||||.|||+||||++|+++.++||+||+|++|+++|++++
T Consensus 1 ~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~ 80 (423)
T TIGR00713 1 KSENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG 80 (423)
T ss_pred CcHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhC
Confidence 47889999999988722 14588999999999999999999999999999999999999999999999986
Q ss_pred ccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 133 TFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 133 ~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+. .+.++...+++++|.+ ..+..+ ++.+.++|+|+++.+++
T Consensus 81 ~~~---~~~~~~~~~lae~l~~----~~~~~~-----~v~~~~sGseA~e~Alk 122 (423)
T TIGR00713 81 TSY---GAPTEAEILLAKEIIS----RVPSVE-----MVRFVNSGTEATMSAVR 122 (423)
T ss_pred CcC---CCCCHHHHHHHHHHHH----hCCccc-----EEEEeCCHHHHHHHHHH
Confidence 532 2334444556666555 344432 48899999999999776
No 51
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1.4e-17 Score=157.91 Aligned_cols=119 Identities=19% Similarity=0.228 Sum_probs=88.3
Q ss_pred cCCChhHHHHHHHHhccc-cC-CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccc
Q psy237 58 EVPGPQTKALKQKLSQLQ-QS-GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFV 135 (236)
Q Consensus 58 ~~pgp~s~~l~~~~~~~~-~~-~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~ 135 (236)
.++++++++++++..+++ .. ...+.|+++++|+|+||||+|||+||||+ |.++++|||+||+|++|+++|++++.+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~-g~~~~~lGh~~p~v~~Ai~~ql~~~~~~ 106 (459)
T PRK06082 28 SMNDERTQALLKRDSEVFLHQAMSTPCLDVLASAEGIYIEDVDGKKYMDFH-GNNVHQLGYGHPHVIEKVKEQMAKLPFS 106 (459)
T ss_pred cCCCcchHHHHHHHHHHhcccccCCCCCceEEeeeeeEEEECCCCEEEEcc-cHhhcccCCCCHHHHHHHHHHHHhCCCc
Confidence 345666777766444433 33 23456889999999999999999999987 4589999999999999999999987764
Q ss_pred cCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 136 NRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 136 ~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.. .+.++...+++++|.+ ..|... + ++.|+++|+|++|.+++
T Consensus 107 ~~-~~~~~~~~~lae~L~~----~~p~~~---~-~v~f~~sGseAve~Alk 148 (459)
T PRK06082 107 PR-RFTNETAIECAEKLTE----IAGGEL---N-RVLFAPGGTSAIGMALK 148 (459)
T ss_pred cC-ccCCHHHHHHHHHHHH----hCCCCC---C-EEEECCCcHHHHHHHHH
Confidence 32 3445555556665555 455321 2 58999999999998876
No 52
>PRK07480 putative aminotransferase; Validated
Probab=99.69 E-value=1.1e-17 Score=158.69 Aligned_cols=97 Identities=19% Similarity=0.147 Sum_probs=79.0
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhcc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~a 160 (236)
.|+++++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+.+.. .+.+++..+++++|.+ ..
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~----~~ 107 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAE----VA 107 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHH----hC
Confidence 468999999999999999999999999999999999999999999999998765432 2455555666666655 34
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + ++.|.++|+||+|.+++
T Consensus 108 p~~~---~-~v~f~~SGseA~e~Alk 129 (456)
T PRK07480 108 PPGF---N-HVFFTNSGSEANDTVLR 129 (456)
T ss_pred CCCc---C-EEEEeCCcHHHHHHHHH
Confidence 5321 2 58899999999998876
No 53
>PRK06917 hypothetical protein; Provisional
Probab=99.69 E-value=7.6e-18 Score=159.31 Aligned_cols=97 Identities=18% Similarity=0.180 Sum_probs=78.6
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
++| ++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+.....+.+++..+++++|.+ ..
T Consensus 13 ~~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~----~~ 87 (447)
T PRK06917 13 PYP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSD----LS 87 (447)
T ss_pred CCC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHH----hC
Confidence 556 5999999999999999999999999999999999999999999999876654333455555566666655 45
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|... + +++|+++|+||++.+++
T Consensus 88 p~~~---~-~v~f~~sGsEAve~Alk 109 (447)
T PRK06917 88 PGDL---N-WSFFVNSGSEANETAMK 109 (447)
T ss_pred CCCC---C-EEEEeCChHHHHHHHHH
Confidence 5421 2 57999999999998876
No 54
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.69 E-value=1.3e-17 Score=158.63 Aligned_cols=96 Identities=13% Similarity=0.111 Sum_probs=80.5
Q ss_pred ceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCc
Q psy237 83 FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGS 162 (236)
Q Consensus 83 p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~ 162 (236)
++++++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+.+...+.+++..+++++|.+ ..|.
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~----~~p~ 105 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVK----ITPP 105 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHH----hCCC
Confidence 368999999999999999999999999999999999999999999999988766555666666667776665 3442
Q ss_pred eeeeeeeeeeecceEEeccccchh
Q psy237 163 VSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 163 ~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.. + +++|.++|+||+|.+++
T Consensus 106 ~~---~-~v~f~~sGsEAve~AlK 125 (466)
T PRK07030 106 GL---S-RCFYADNGSSAIEVALK 125 (466)
T ss_pred Cc---C-EEEEeCCcHHHHHHHHH
Confidence 21 2 58999999999999887
No 55
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.69 E-value=8.9e-18 Score=158.67 Aligned_cols=112 Identities=21% Similarity=0.261 Sum_probs=82.9
Q ss_pred HHHHHhccccCCccccceeeecccccEEEeC-CCCEEEeccCCcccccCCCChHHHHH--Hhhcccccccccc--CCCCC
Q psy237 67 LKQKLSQLQQSGSVSLFVDYQKSFGNYLVDV-DGNHILDVYTQISSVPLGYNHPALLK--IFDDPATVKTFVN--RPALG 141 (236)
Q Consensus 67 l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~-dG~~yLD~~~g~~~~~lGh~hP~V~~--Ai~~q~~~~~~~~--~~~~~ 141 (236)
+.+...++......++++++++|+|+||||+ |||+||||++|+++.+|||+||+|++ |+++|++++.+.. ...+.
T Consensus 11 ~~~~~~~~~~~~~~p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~ 90 (443)
T PRK08297 11 VHEVLARHILVDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVY 90 (443)
T ss_pred hhHHHHHHHhhcCCCcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcC
Confidence 4445555555444566666899999999996 99999999999999999999999999 9999999876422 22344
Q ss_pred CCCCCChhhhhHhhhhhcc-CceeeeeeeeeeecceEEeccccchh
Q psy237 142 VFPSGDWPQLLENVLLKQS-GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~a-p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+++..+++++|.+ .. |... + +++|++||+||+|.+++
T Consensus 91 ~~~~~~la~~l~~----~~~p~~~---~-~v~f~~SGsEAve~AlK 128 (443)
T PRK08297 91 TVEMARFVDTFAR----VLGDPEL---P-HLFFVDGGALAVENALK 128 (443)
T ss_pred CHHHHHHHHHHHh----hcCCCCC---C-EEEEeCchHHHHHHHHH
Confidence 4444455555444 33 3211 2 68999999999998876
No 56
>PRK07481 hypothetical protein; Provisional
Probab=99.68 E-value=1e-17 Score=158.40 Aligned_cols=98 Identities=13% Similarity=0.064 Sum_probs=80.0
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhcc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~a 160 (236)
.|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|++++.+.... .+.+++..+++++|.+ ..
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~----~~ 99 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELID----MF 99 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHH----hc
Confidence 578999999999999999999999999999999999999999999999998765432 3456666667776665 33
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|...+ + +++|.++|+||+|.+++
T Consensus 100 ~~~~~--~-~v~f~~sGsEAve~Alk 122 (449)
T PRK07481 100 APEGM--R-RVFFSSGGSDSVETALK 122 (449)
T ss_pred CCCCC--C-EEEEcCchHHHHHHHHH
Confidence 21111 2 68999999999998876
No 57
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.68 E-value=1.9e-17 Score=155.74 Aligned_cols=113 Identities=21% Similarity=0.269 Sum_probs=84.5
Q ss_pred HHHHHHhccccCCccccceeeecccccEEEeC-CCCEEEeccCCcccccCCCChHHHH--HHhhcccccccccc--CCCC
Q psy237 66 ALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDV-DGNHILDVYTQISSVPLGYNHPALL--KIFDDPATVKTFVN--RPAL 140 (236)
Q Consensus 66 ~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~-dG~~yLD~~~g~~~~~lGh~hP~V~--~Ai~~q~~~~~~~~--~~~~ 140 (236)
.+++.+.+|+.....|+++++++|+|+||||. |||+||||++|+++.+|||+||+|+ +|+++|++++.+.. ...+
T Consensus 3 ~~~~~~~~~~~~~~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~ 82 (431)
T TIGR03251 3 RVHEVLSRHMLTDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDV 82 (431)
T ss_pred hHHHHHHHHhhccCCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCC
Confidence 46777788887766667777899999999996 9999999999999999999999999 99999999875422 1123
Q ss_pred CCCCCCChhhhhHhhhhhcc-CceeeeeeeeeeecceEEeccccchh
Q psy237 141 GVFPSGDWPQLLENVLLKQS-GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 141 ~~~~~~elAE~Lae~Ll~~a-p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+++..+++++ |.... +... + +++|+++|+||+|.+++
T Consensus 83 ~~~~~~~l~~~----l~~~~~~~~~---~-~v~f~~sGsEAve~Alk 121 (431)
T TIGR03251 83 YTVAMARFVDT----FARVLGDPAL---P-HLFFIEGGALAVENALK 121 (431)
T ss_pred CCHHHHHHHHH----HHHhcCCCCc---C-EEEEeCCcHHHHHHHHH
Confidence 33333333333 33333 3211 2 68999999999998776
No 58
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.68 E-value=1.5e-17 Score=157.92 Aligned_cols=97 Identities=13% Similarity=0.086 Sum_probs=79.5
Q ss_pred ccceeeecccc-cEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 81 SLFVDYQKSFG-NYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 81 ~~p~~i~~a~G-~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
.+|+++++|+| +||||+|||+||||++|+|+.++||+||+|++|+++|++++.+.+. .+.++...+++++|.+ .
T Consensus 62 ~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~lae~L~~----~ 136 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQ-ELLDPLRAMLAKTLAA----L 136 (459)
T ss_pred CCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccccc-ccCCHHHHHHHHHHHH----h
Confidence 46789999999 9999999999999999999999999999999999999998876543 3445555556666555 4
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.|+.. + +++|+++|+||+|.+++
T Consensus 137 ~p~~~---~-~v~f~~SGsEAve~Alk 159 (459)
T PRK11522 137 TPGKL---K-YSFFCNSGTESVEAALK 159 (459)
T ss_pred CCCCC---C-EEEEeCCchHHHHHHHH
Confidence 55422 2 58999999999999877
No 59
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.66 E-value=2.6e-17 Score=152.04 Aligned_cols=112 Identities=15% Similarity=0.127 Sum_probs=86.5
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
..|+.+++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+... .+.+++..++++++.+ ..
T Consensus 5 ~~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~la~~l~~----~~ 79 (364)
T PRK04013 5 RKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP-MFEHEEKEEMLEELSK----WV 79 (364)
T ss_pred CCCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC-CcCCHHHHHHHHHHHh----hc
Confidence 457889999999999999999999999999999999999999999999999876653 4555555566666555 23
Q ss_pred CceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHH
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPA 203 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~ 203 (236)
+ .. ++.++++|+|+++.+++ |-+..+....+|.....
T Consensus 80 ~-~~-----~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ 124 (364)
T PRK04013 80 N-YE-----YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGA 124 (364)
T ss_pred C-CC-----EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhh
Confidence 2 22 47889999999999877 33333444566665443
No 60
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.66 E-value=2.8e-17 Score=157.66 Aligned_cols=99 Identities=19% Similarity=0.206 Sum_probs=78.8
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~ 159 (236)
+.|+++++|+|+||||+|||+||||++|+|+.+|||+||+|++|+++|++++.+.+.. .+.+++..+++++|.+ .
T Consensus 70 ~~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~----~ 145 (504)
T PLN02760 70 LEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLE----M 145 (504)
T ss_pred CCCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHh----h
Confidence 4688999999999999999999999999999999999999999999999998765432 2345555566666555 3
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+..++ . ++.|.++|+||++.+++
T Consensus 146 ~~~~~~--~-~v~f~~SGsEA~e~AlK 169 (504)
T PLN02760 146 FTARKM--G-KVFFTNSGSEANDTQVK 169 (504)
T ss_pred cCCCCC--C-EEEEeCChHHHHHHHHH
Confidence 222211 1 58899999999998776
No 61
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.66 E-value=6.6e-17 Score=151.53 Aligned_cols=116 Identities=14% Similarity=0.050 Sum_probs=87.9
Q ss_pred HHHHHHHHhccccC-CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCC
Q psy237 64 TKALKQKLSQLQQS-GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGV 142 (236)
Q Consensus 64 s~~l~~~~~~~~~~-~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~ 142 (236)
.+++.++..+++++ ...++|+++++|+|+||||+||++||||++|+++.++||+||+|++|+++|++++.+.....+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~~~~~~ 83 (425)
T PRK08088 4 NKSLMQRRSAAVPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAY 83 (425)
T ss_pred HHHHHHHHHHhhccccCCCCCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccccccCC
Confidence 35567676666554 33556899999999999999999999999999999999999999999999999887654433445
Q ss_pred CCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 143 FPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 143 ~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++..++++++.+ ..+... ..++.+.++|+|++|.+++
T Consensus 84 ~~~~~la~~l~~----~~~~~~---~~~~~f~~sGsea~e~Alk 120 (425)
T PRK08088 84 EPYLELCEKMNQ----KVPGDF---AKKTLLVTTGSEAVENAVK 120 (425)
T ss_pred HHHHHHHHHHHH----hCCCCC---CCEEEEeCCcHHHHHHHHH
Confidence 444555555554 333211 1157899999999998776
No 62
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.65 E-value=3.8e-17 Score=154.43 Aligned_cols=95 Identities=15% Similarity=0.135 Sum_probs=76.7
Q ss_pred ceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCc
Q psy237 83 FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGS 162 (236)
Q Consensus 83 p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~ 162 (236)
.+++++++|+||||+|||+||||++|+|+.++||+||+|++|+++|++++.+.+. .+.+++..+++++|.+ ..|+
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~-~~~~~~~~~lAe~L~~----~~p~ 132 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQ-ELLDPLRALLAKTLAA----LTPG 132 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCccc-ccCCHHHHHHHHHHHH----hCCC
Confidence 3556788889999999999999999999999999999999999999998876543 3446566666666665 3554
Q ss_pred eeeeeeeeeeecceEEeccccchh
Q psy237 163 VSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 163 ~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.. + +++|+++|+||+|.+++
T Consensus 133 ~~---~-~v~f~~SGsEA~e~Alk 152 (442)
T TIGR03372 133 KL---K-YSFFCNSGTESVEAALK 152 (442)
T ss_pred Cc---C-EEEEeCCchHHHHHHHH
Confidence 21 2 57899999999998876
No 63
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.65 E-value=1e-16 Score=150.41 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=96.9
Q ss_pred hhHHHHHHHHhccccCCc----------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 62 PQTKALKQKLSQLQQSGS----------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~~----------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++|++|.|++.+++++.. .++|+++++|+|+||||.||++||||.+|+++.+|||+||+|++|+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~ 81 (426)
T PRK00062 2 SKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK 81 (426)
T ss_pred chhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh
Confidence 578999999999988732 1346889999999999999999999999999999999999999999999988
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhccccccccCCCCHH
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPLGYNHPA 203 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~lGh~~p~ 203 (236)
... ..+.++...+++++|.+ ..+... ++.+.++|+||++.+++ +-+-.+....+|+....
T Consensus 82 ~~~---~~~~~~~~~~la~~L~~----~~~~~~-----~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~ 149 (426)
T PRK00062 82 GLS---FGAPTELEVELAELVIE----LVPSIE-----MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSL 149 (426)
T ss_pred CCc---CCCCCHHHHHHHHHHHH----hCCCCC-----EEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhh
Confidence 432 12333333444444444 344332 57889999999998776 22233455567765444
Q ss_pred H
Q psy237 204 L 204 (236)
Q Consensus 204 i 204 (236)
+
T Consensus 150 ~ 150 (426)
T PRK00062 150 L 150 (426)
T ss_pred h
Confidence 3
No 64
>KOG1402|consensus
Probab=99.64 E-value=9.2e-17 Score=144.35 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=93.1
Q ss_pred ChhHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCC
Q psy237 61 GPQTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPAL 140 (236)
Q Consensus 61 gp~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~ 140 (236)
+..|+.++++..++-...+.|+|+++++|+|+++||.+|++||||+++++++|.|||||.|++|+++|+++++..++..+
T Consensus 20 ~~aS~~~~~~E~k~~ahnyhpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlssrafY 99 (427)
T KOG1402|consen 20 TTASQQIMERENKYGAHNYHPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSSRAFY 99 (427)
T ss_pred ccchhhhhchhhhcccccCCcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhhHHHh
Confidence 34467788888888888899999999999999999999999999999999999999999999999999999987776443
Q ss_pred CCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 141 GVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 141 ~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+....++++.+.+ .++. + ++.-.++|.|++|.+.+
T Consensus 100 -nd~~~~f~~~vt~----lf~~-~-----kvlpmnTGaEa~Eta~K 134 (427)
T KOG1402|consen 100 -NDVLGEFAEYVTK----LFGY-D-----KVLPMNTGAEAVETACK 134 (427)
T ss_pred -hhhHHHHHHHHHH----hcCc-c-----eeeecccchhHHHHHHH
Confidence 4444455554444 4443 3 24447889999998765
No 65
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.64 E-value=9.5e-17 Score=149.53 Aligned_cols=97 Identities=19% Similarity=0.137 Sum_probs=78.0
Q ss_pred ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhh
Q psy237 79 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLK 158 (236)
Q Consensus 79 ~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~ 158 (236)
..++|+++++|+|+||||.|||+||||++|+++.+|||+||+|++|+++|++++.+++. .+.+++..+++++|.+
T Consensus 18 ~~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~~la~~l~~---- 92 (406)
T PRK12381 18 YAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN-GYTNEPVLRLAKKLID---- 92 (406)
T ss_pred cCCCCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC-ccCCHHHHHHHHHHHh----
Confidence 34678899999999999999999999999999999999999999999999998765543 3334444555555555
Q ss_pred ccCceeeeeeeeeeecceEEeccccchh
Q psy237 159 QSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 159 ~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+ . + ++.+.++|+|+++.+++
T Consensus 93 ~~~-~----~-~v~~~~sGseA~e~Alk 114 (406)
T PRK12381 93 ATF-A----D-RVFFCNSGAEANEAALK 114 (406)
T ss_pred hCC-C----C-eEEEcCCcHHHHHHHHH
Confidence 333 2 2 58999999999998776
No 66
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.63 E-value=1.2e-16 Score=148.46 Aligned_cols=97 Identities=16% Similarity=0.123 Sum_probs=77.8
Q ss_pred ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhh
Q psy237 79 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLK 158 (236)
Q Consensus 79 ~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~ 158 (236)
..++|+++++|+|+||||+|||+||||.+|+++.+|||+||+|++|+++|++++.+... .+.+++..+++++|.+
T Consensus 14 ~~~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~L~~---- 88 (397)
T TIGR03246 14 YAPAPFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN-GYTNEPVLRLAKKLVD---- 88 (397)
T ss_pred cCCCCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC-ccCCHHHHHHHHHHHh----
Confidence 34678999999999999999999999999999999999999999999999998655432 3344444555555555
Q ss_pred ccCceeeeeeeeeeecceEEeccccchh
Q psy237 159 QSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 159 ~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+. + ++.+.+||+|+++.+++
T Consensus 89 ~~~~-~-----~~~f~~SGseA~e~Alk 110 (397)
T TIGR03246 89 ATFA-D-----KVFFCNSGAEANEAALK 110 (397)
T ss_pred hCCC-C-----EEEEeCCcHHHHHHHHH
Confidence 3332 2 48899999999999876
No 67
>PLN00144 acetylornithine transaminase
Probab=99.63 E-value=8.7e-17 Score=149.04 Aligned_cols=90 Identities=23% Similarity=0.279 Sum_probs=74.0
Q ss_pred eecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCceee
Q psy237 86 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSL 165 (236)
Q Consensus 86 i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~ 165 (236)
+++|+|+||||+|||+||||++|+++.++||+||+|++|+++|++++.+.+. .+.+++..+++++|.+ ..+ .
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~la~~l~~----~~~-~-- 72 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSN-VYHTIPQVELAKRLVA----SSF-A-- 72 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccc-cccCHHHHHHHHHHHh----cCC-C--
Confidence 5789999999999999999999999999999999999999999999876653 2345555566666554 232 2
Q ss_pred eeeeeeeecceEEeccccchh
Q psy237 166 FVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 166 ~i~~~~~~G~sgsDA~g~a~l 186 (236)
+ ++.+.++|+|++|.+++
T Consensus 73 --~-~v~f~~sGseA~e~Alk 90 (382)
T PLN00144 73 --D-RVFFCNSGTEANEAAIK 90 (382)
T ss_pred --C-eEEEeCCcHHHHHHHHH
Confidence 2 58999999999998877
No 68
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.62 E-value=4.5e-17 Score=148.80 Aligned_cols=94 Identities=22% Similarity=0.255 Sum_probs=77.3
Q ss_pred eeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCcee
Q psy237 85 DYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVS 164 (236)
Q Consensus 85 ~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~ 164 (236)
+|+||+|+||||.|||+||||++|+++.+|||+||+|++|+++|++++.+.+...+.+++..+++++|.+ ..|...
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~----~~p~~~ 76 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAE----LFPGGL 76 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHH----HSSTTE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhh----cccccc
Confidence 5899999999999999999999999999999999999999999999988876556666666666666665 345421
Q ss_pred eeeeeeeeecceEEeccccchh
Q psy237 165 LFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 165 ~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.++.+.++|+|++|.+++
T Consensus 77 ----~~v~f~~sGseAve~Alk 94 (339)
T PF00202_consen 77 ----DRVFFANSGSEAVEAALK 94 (339)
T ss_dssp ----EEEEEESSHHHHHHHHHH
T ss_pred ----ceeeeccCchHHHHHHHH
Confidence 268999999999999876
No 69
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.61 E-value=2.8e-16 Score=147.79 Aligned_cols=96 Identities=17% Similarity=0.063 Sum_probs=77.5
Q ss_pred ceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCc
Q psy237 83 FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGS 162 (236)
Q Consensus 83 p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~ 162 (236)
+..+++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.....+.++...+++++|.+ ..|.
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~----~~~~ 103 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVK----MTPN 103 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHh----hCCC
Confidence 356899999999999999999999999999999999999999999999877655434455555566666655 3443
Q ss_pred eeeeeeeeeeecceEEeccccchh
Q psy237 163 VSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 163 ~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.. + ++.+.++|+|+++.+++
T Consensus 104 ~~---~-~v~f~~sGseA~e~Alk 123 (427)
T TIGR00508 104 AL---D-CVFLADSGSVAVEVALK 123 (427)
T ss_pred CC---C-EEEEeCCcHHHHHHHHH
Confidence 21 2 68999999999998766
No 70
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.60 E-value=6.4e-16 Score=142.95 Aligned_cols=112 Identities=23% Similarity=0.186 Sum_probs=83.3
Q ss_pred HHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC
Q psy237 64 TKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF 143 (236)
Q Consensus 64 s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~ 143 (236)
+.++++....+......+.|+++++++|+||||+||++||||.+|++++++||+||+|++|+++|++++.+.++ .+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~-~~~~~ 83 (401)
T PRK00854 5 SEDLIATEQRLGAHNYKPLDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSR-AFRND 83 (401)
T ss_pred CHHHHHHHhhhhhcccCCCCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc-ccCCH
Confidence 46676655544333334678899999999999999999999999999999999999999999999999876543 23333
Q ss_pred CCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 144 PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 144 ~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
...+++++ |....+. + +..+.++|++|++.+++
T Consensus 84 ~~~~l~~~----l~~~~~~-~-----~~~~~~SGs~A~e~al~ 116 (401)
T PRK00854 84 QLAPLYEE----LAALTGS-H-----KVLPMNSGAEAVETAIK 116 (401)
T ss_pred HHHHHHHH----HHhhCCC-C-----EEEEeCCcHHHHHHHHH
Confidence 33334444 4333432 2 47888999999998765
No 71
>PRK06148 hypothetical protein; Provisional
Probab=99.59 E-value=7.2e-16 Score=158.37 Aligned_cols=110 Identities=13% Similarity=0.115 Sum_probs=84.2
Q ss_pred HHHHHHHhccccCCc---cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCC
Q psy237 65 KALKQKLSQLQQSGS---VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALG 141 (236)
Q Consensus 65 ~~l~~~~~~~~~~~~---~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~ 141 (236)
.++++++..++.+.. .++|+++++|+|+||||+|||+||||++|+ .+|||+||+|++|+++|++++.... .+.
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~--~~~ 661 (1013)
T PRK06148 586 AEILRERKEHLLPNLSISYSDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTNT--RYL 661 (1013)
T ss_pred HHHHHHHHHhcCcccccccCCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCcC--CcC
Confidence 344556566665532 367899999999999999999999999985 7899999999999999999873322 345
Q ss_pred CCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 142 VFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+++..+++++|.+ ..|... + +++|++||+||++.+++
T Consensus 662 ~~~~~~lAe~L~~----~~p~~~---~-~v~f~nSGsEA~e~Alk 698 (1013)
T PRK06148 662 HDAIVAYAERLTA----TLPDGL---T-VAFFVNSGSEANSLALR 698 (1013)
T ss_pred CHHHHHHHHHHHH----hCCCCc---C-EEEEeCCcHHHHHHHHH
Confidence 6666666766665 345321 2 58999999999998876
No 72
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.58 E-value=8.7e-16 Score=141.65 Aligned_cols=96 Identities=21% Similarity=0.231 Sum_probs=76.3
Q ss_pred cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 80 VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 80 ~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
.+.|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+... .+.++...+++++|.+ .
T Consensus 11 ~~~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~la~~l~~----~ 85 (389)
T PRK01278 11 NRADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN-LYRIPEQERLAERLVE----N 85 (389)
T ss_pred CCCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcccc-ccCChHHHHHHHHHHh----h
Confidence 3568899999999999999999999999999999999999999999999998766543 2334444555555554 3
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+ .+ ++.+.++|+|+++.+++
T Consensus 86 ~~-~~-----~v~~~~sGseA~~~al~ 106 (389)
T PRK01278 86 SF-AD-----KVFFTNSGAEAVECAIK 106 (389)
T ss_pred CC-CC-----EEEEcCCcHHHHHHHHH
Confidence 33 12 47889999999998754
No 73
>PRK06149 hypothetical protein; Provisional
Probab=99.57 E-value=1.4e-15 Score=155.70 Aligned_cols=114 Identities=15% Similarity=0.117 Sum_probs=88.4
Q ss_pred ChhHHHHHHHHhccccCC---ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccC
Q psy237 61 GPQTKALKQKLSQLQQSG---SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNR 137 (236)
Q Consensus 61 gp~s~~l~~~~~~~~~~~---~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~ 137 (236)
.+++.++++++++++.+. ..+.|+++++|+|+||||.|||+||||++|+ .++||+||+|++|+++|+.++.+.+
T Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~~- 619 (972)
T PRK06149 543 PPDAAALLARRDASFARVQKHYYADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNS- 619 (972)
T ss_pred CCCHHHHHHHHHHhhccchhhcccCCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhccccc-
Confidence 467788999988887662 2345789999999999999999999999986 4799999999999999999876433
Q ss_pred CCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 138 PALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 138 ~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+.++...+++++|.+ ..|... + +++|.+||+||++.+++
T Consensus 620 -~~~~~~~~elae~L~~----~~p~~~---~-~v~f~~SGsEA~e~Alk 659 (972)
T PRK06149 620 -RFHYAAVAEFSERLAA----LAPDGL---D-TVFLVNSGSEANDLAIR 659 (972)
T ss_pred -cccCHHHHHHHHHHHH----hCCCCc---C-EEEEeCCchHHHHHHHH
Confidence 2334444555555554 455321 2 58999999999999887
No 74
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.57 E-value=1.1e-15 Score=142.40 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=74.8
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
..|+++++|+|+||||+|||+||||++|+++.+|||+||+|++|+++|++++.+.+. .+.+++..+++++|.+ ..
T Consensus 17 ~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~~~~~~~la~~l~~----~~ 91 (395)
T PRK03715 17 RPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP-AFYNEPMAKLAGLLTQ----HS 91 (395)
T ss_pred CCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc-cccCHHHHHHHHHHhh----cc
Confidence 357889999999999999999999999999999999999999999999998765543 2334444444444443 22
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+ .. ++.+.++|+|+++.+++
T Consensus 92 ~-~~-----~v~f~~SGseA~e~Aik 111 (395)
T PRK03715 92 C-FD-----KVFFANSGAEANEGAIK 111 (395)
T ss_pred C-CC-----EEEEeCCcHHHHHHHHH
Confidence 2 22 48899999999998775
No 75
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.56 E-value=1.3e-15 Score=141.52 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=76.3
Q ss_pred ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhh
Q psy237 79 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLK 158 (236)
Q Consensus 79 ~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~ 158 (236)
..++|+++++|+|+||||.||++||||++|+++.+|||+||+|++|+.+|+++..+... .+.+++..+++++|.+
T Consensus 19 ~~~~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~---- 93 (403)
T PRK05093 19 YAPAEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISN-VFTNEPALRLAKKLID---- 93 (403)
T ss_pred cCCCCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccC-ccCCHHHHHHHHHHHh----
Confidence 44788999999999999999999999999999999999999999999999987654432 2334444445555544
Q ss_pred ccCceeeeeeeeeeecceEEeccccchh
Q psy237 159 QSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 159 ~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+ .+ ++.+.++|+|+++.+++
T Consensus 94 ~~~-~~-----~~~~~~sGseA~e~a~k 115 (403)
T PRK05093 94 ATF-AE-----RVFFANSGAEANEAAFK 115 (403)
T ss_pred hCC-CC-----EEEEeCchHHHHHHHHH
Confidence 332 22 57889999999999876
No 76
>KOG1401|consensus
Probab=99.56 E-value=1.7e-15 Score=139.14 Aligned_cols=122 Identities=16% Similarity=0.133 Sum_probs=95.0
Q ss_pred CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhh
Q psy237 78 GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLL 157 (236)
Q Consensus 78 ~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll 157 (236)
.+..+|+++.+++|+.+||.||++|+||+++||+..+||+||+|.+|+.+|+.++.|+....+..+ ..++++.+.+
T Consensus 34 t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~--- 109 (433)
T KOG1401|consen 34 TYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSA--- 109 (433)
T ss_pred ecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHh---
Confidence 445678999999999999999999999999999999999999999999999999999876655433 4455555444
Q ss_pred hccCceeeeeeeeeeecceEEeccccchh--------hh------hccccccccCCCCHHHHHh
Q psy237 158 KQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DV------YTQISSVPLGYNHPALLKI 207 (236)
Q Consensus 158 ~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~------~sg~~~~~lGh~~p~i~~A 207 (236)
...... .-+++|+++|+||+|.+++ +- +..+-...||+..-.+..+
T Consensus 110 -~~~~~~---~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~ 169 (433)
T KOG1401|consen 110 -VLGKGS---AERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT 169 (433)
T ss_pred -cccCCC---ccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh
Confidence 222221 1268999999999999887 21 3335667788887777655
No 77
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.54 E-value=3.1e-15 Score=138.78 Aligned_cols=112 Identities=21% Similarity=0.211 Sum_probs=85.7
Q ss_pred HHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC
Q psy237 64 TKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF 143 (236)
Q Consensus 64 s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~ 143 (236)
|++++++..++......+.|.++++++|+||||.||++||||.++++++++||+||+|++|+++|++++.+.+. .+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~-~~~~~ 79 (401)
T TIGR01885 1 SEEAIERENKYGAHNYHPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSR-AFYND 79 (401)
T ss_pred ChhHHHHHHHhhhcccCCCCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccc-ccCCH
Confidence 35667777766555444678889999999999999999999999999999999999999999999998765543 23344
Q ss_pred CCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 144 PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 144 ~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
...+++++|.+ ..+ .+ ++.+.++|+++++.+++
T Consensus 80 ~~~~l~~~l~~----~~~-~~-----~~~~~~SGs~A~e~ai~ 112 (401)
T TIGR01885 80 VFGEFAEYVTK----LFG-YD-----KVLPMNTGAEAVETAIK 112 (401)
T ss_pred HHHHHHHHHHh----hcC-CC-----EEEEeCccHHHHHHHHH
Confidence 44455555554 333 22 47888999999998766
No 78
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.51 E-value=6.1e-15 Score=136.12 Aligned_cols=100 Identities=20% Similarity=0.173 Sum_probs=76.8
Q ss_pred cCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhh
Q psy237 76 QSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENV 155 (236)
Q Consensus 76 ~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~ 155 (236)
.....++|+++++++|+||||.|||+||||++|+++.++||+||+|++|+++|++++.+.++. +.+ +..+.+++.
T Consensus 7 ~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~-~~~----~~~~~~~~~ 81 (400)
T PTZ00125 7 AHNYHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRA-FYN----DVLGLAEKY 81 (400)
T ss_pred ccccCCCCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccccc-ccC----HHHHHHHHH
Confidence 333456788999999999999999999999999999999999999999999999887765432 222 234444443
Q ss_pred hhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 156 LLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 156 Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+.. .++.+ ++.+.+||+++++.++.
T Consensus 82 l~~-~~~~~-----~~~~~~SGs~A~e~al~ 106 (400)
T PTZ00125 82 ITD-LFGYD-----KVLPMNSGAEAGETALK 106 (400)
T ss_pred HHh-CCCCC-----EEEEeCCcHHHHHHHHH
Confidence 332 33332 47788999999998776
No 79
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.47 E-value=4.6e-14 Score=129.42 Aligned_cols=95 Identities=19% Similarity=0.230 Sum_probs=74.5
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
++|+++++|+|+|+||+|||+||||.+|+++.+|||+||+|++|+++|+++..+.+. .+ ..++.+.+++.+....
T Consensus 10 ~~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~----~~~~~~~la~~l~~~~ 84 (377)
T PRK02936 10 RFPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSN-LF----TNSLQEEVASLLAENS 84 (377)
T ss_pred CCCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccccc-cc----CCHHHHHHHHHHHhcC
Confidence 467889999999999999999999999999999999999999999999988654332 12 2344555555443333
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+ .+ ++.+.++|+++++.+++
T Consensus 85 ~-~~-----~~~~~~sG~~a~~~A~~ 104 (377)
T PRK02936 85 A-GD-----LVFFCNSGAEANEAALK 104 (377)
T ss_pred C-CC-----EEEEeCCcHHHHHHHHH
Confidence 3 12 47888999999998876
No 80
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.45 E-value=4.7e-14 Score=129.72 Aligned_cols=112 Identities=20% Similarity=0.219 Sum_probs=83.5
Q ss_pred HHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC
Q psy237 64 TKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF 143 (236)
Q Consensus 64 s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~ 143 (236)
|.++..+..+++.....++|+++++|+|+||||.|||+||||.+|+++.+|||+||+|.+|+++|+++..+... .+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~- 80 (396)
T PRK02627 3 SEAIIELEKKYLMNTYGRLPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSN-LYYI- 80 (396)
T ss_pred HHHHHHHHHHhhcccccCCCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccccc-ccCC-
Confidence 45666666666655455778999999999999999999999999999999999999999999999987654321 1222
Q ss_pred CCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 144 PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 144 ~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
...+.+++.+.... +.+ ...++++|+++++.++.
T Consensus 81 ---~~~~~la~~l~~~~-~~~-----~v~~~~gg~eA~~~al~ 114 (396)
T PRK02627 81 ---EPQEELAEKLVELS-GMD-----KVFFCNSGAEANEAAIK 114 (396)
T ss_pred ---HHHHHHHHHHHhhc-CCC-----EEEECCCcHHHHHHHHH
Confidence 33444444343333 222 47888999999998766
No 81
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.44 E-value=5.9e-14 Score=141.08 Aligned_cols=118 Identities=11% Similarity=-0.015 Sum_probs=92.8
Q ss_pred hhHHHHHHHHhccccCCc-------cccceeeeccccc----EEEeCCCC----EEEeccCCcccccCC-CChHHHHHHh
Q psy237 62 PQTKALKQKLSQLQQSGS-------VSLFVDYQKSFGN----YLVDVDGN----HILDVYTQISSVPLG-YNHPALLKIF 125 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~~-------~~~p~~i~~a~G~----~l~D~dG~----~yLD~~~g~~~~~lG-h~hP~V~~Ai 125 (236)
++++++.+++++++.-.+ ..-+.+|++++|. |++|.||+ +|||+.+|+|+.++| |+||+|++|+
T Consensus 312 ~~~~~~~~~a~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai 391 (817)
T PLN02974 312 QRLQSMPKEAGEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAV 391 (817)
T ss_pred HHHHHHHHHHhhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHH
Confidence 356677777777753211 1135789999998 99999998 999999999999999 6899999999
Q ss_pred hccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 126 DDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 126 ~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++|++++.|+....+.+++..+++++|.+ + .+... ..+++|+++|+||+|.+++
T Consensus 392 ~~Qa~rl~hv~~~~~~hepa~~LAe~L~~-~---~~~~~---l~rVffs~sGSeAvE~AlK 445 (817)
T PLN02974 392 AYAAGRYGHVMFPENVHEPALRAAELLLG-G---PGKGW---ASRVFFSDNGSTAIEVALK 445 (817)
T ss_pred HHHHhhCCccccCccCCHHHHHHHHHHHh-c---cCCCC---CCEEEECCchHHHHHHHHH
Confidence 99999999987656677777777777766 2 33111 1268999999999998776
No 82
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.39 E-value=1.9e-13 Score=126.33 Aligned_cols=114 Identities=18% Similarity=0.185 Sum_probs=82.3
Q ss_pred HHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCC
Q psy237 65 KALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFP 144 (236)
Q Consensus 65 ~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~ 144 (236)
++.++...+++.......|+++++++|+|+||.|||+||||.+|+++.+|||+||+|++|+++|+++..+... .+.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~-~~~~~~ 86 (398)
T PRK03244 8 AELLQRWQAVMMNNYGTPPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSN-LFATEP 86 (398)
T ss_pred HHHHHHHHHHhhhhccCCCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccC-ccCCHH
Confidence 3344444445444334567899999999999999999999999999999999999999999999998654322 233444
Q ss_pred CCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 145 SGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 145 ~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..++++++.+ ..+... ..+..++++|+++++.++.
T Consensus 87 ~~~la~~l~~----~~~~~~---~~~v~~~~sgsea~~~al~ 121 (398)
T PRK03244 87 QIALAERLVE----LLGAPE---GGRVFFCNSGAEANEAAFK 121 (398)
T ss_pred HHHHHHHHHH----hCCCCC---CCEEEEeCchHHHHHHHHH
Confidence 4455555554 333211 0147888999999998765
No 83
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.36 E-value=2.8e-13 Score=125.00 Aligned_cols=99 Identities=23% Similarity=0.241 Sum_probs=74.1
Q ss_pred cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 80 VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 80 ~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
.++|+++++++|++|||+||++||||.+|++++++||+||+|++|+.+|+.+..+.......+ +....+++.+...
T Consensus 16 ~~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~~~ 91 (413)
T cd00610 16 RPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGFFYN----EPAVELAELLLAL 91 (413)
T ss_pred CCCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcccCC----HHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999999999999999997755433211112 3344444444444
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+... + ++.+.++|+++++.++.
T Consensus 92 ~~~~~---~-~v~~~~sgsea~~~al~ 114 (413)
T cd00610 92 TPEGL---D-KVFFVNSGTEAVEAALK 114 (413)
T ss_pred CCCCC---C-EEEEcCcHHHHHHHHHH
Confidence 54211 2 47888999999997665
No 84
>KOG1403|consensus
Probab=99.35 E-value=2.5e-13 Score=121.28 Aligned_cols=109 Identities=17% Similarity=0.119 Sum_probs=82.4
Q ss_pred HHHHHHHhccccC----CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCC
Q psy237 65 KALKQKLSQLQQS----GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPAL 140 (236)
Q Consensus 65 ~~l~~~~~~~~~~----~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~ 140 (236)
.+.++++++++.. .+..-|+.|+||+|.|++|++|++||||++.++ ..|||||+|++|+..|+..+.--++ |
T Consensus 8 ~etlklRk~hIG~~Cq~Fy~sDP~kivRaq~QYmfDE~g~~yLDCInNVa--Hvghchp~VV~A~~kQmat~~tN~R--F 83 (452)
T KOG1403|consen 8 TETLKLRKQHIGQACQLFYRSDPLKIVRAQGQYMFDEEGTRYLDCINNVA--HVGHCHPEVVRAGAKQMATISTNNR--F 83 (452)
T ss_pred HHHHhHHHhccCcceeEEecCCchhhehhccceeeccCcccHHHHhhhhh--hcccCCHHHHHHHHHHHhHhcccch--h
Confidence 3467777888776 345568999999999999999999999999864 6899999999999999987653221 2
Q ss_pred CCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 141 GVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 141 ~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+ .++.+-... |....|... ..+|.+||+||++-++.
T Consensus 84 lh---d~lv~cA~~-l~stlPeLs-----vc~F~NSGSEANDLALR 120 (452)
T KOG1403|consen 84 LH---DELVQCART-LTSTLPELS-----VCFFVNSGSEANDLALR 120 (452)
T ss_pred hH---HHHHHHHHH-HhhcCCCce-----EEEEecCCchhhHHHHH
Confidence 22 333333333 555667643 58999999999998775
No 85
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.30 E-value=2e-12 Score=118.92 Aligned_cols=93 Identities=24% Similarity=0.361 Sum_probs=69.8
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
+.|+++++|+|+||||+||++||||.+|++++++|| ||+|++|+.+|++++.+.. +....+..+.+++.+..
T Consensus 10 ~~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~-----~~~~~~~~~~la~~l~~-- 81 (375)
T PRK04260 10 RAAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSP-----NLYLNSLQEEVAQKLIG-- 81 (375)
T ss_pred CCCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCccc-----CccCCHHHHHHHHHHhc--
Confidence 357889999999999999999999999999999999 9999999999998764322 12233445555553321
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
. . ..+..+.++|+|+++.++.
T Consensus 82 ~-~----~~~~~~~~SGseA~~~Al~ 102 (375)
T PRK04260 82 D-K----DYLAFFCNSGAEANEAAIK 102 (375)
T ss_pred C-c----CCEEEEcCccHHHHHHHHH
Confidence 1 1 1135788999999996544
No 86
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.19 E-value=9.2e-12 Score=115.36 Aligned_cols=69 Identities=25% Similarity=0.356 Sum_probs=58.6
Q ss_pred hhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 148 WPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 148 lAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
..+...+++++.+.+.++ .+++++|++.||.+|++||||++|++++++||+||+|++|+++ ++++|+|.
T Consensus 9 ~~~~~~~~~~~~Y~~~~~--~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn 79 (404)
T COG4992 9 TIELFMKYLMPTYGRLPV--VIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSN 79 (404)
T ss_pred HHHHHHHhhhcccCcCce--eEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccc
Confidence 344555667777877775 3459999999999999999999999999999999999999999 66888873
No 87
>PRK07505 hypothetical protein; Provisional
Probab=99.17 E-value=2.1e-11 Score=113.19 Aligned_cols=111 Identities=14% Similarity=0.027 Sum_probs=72.0
Q ss_pred HHHHHHHhccccC--CccccceeeecccccEEEeCCCCEEEeccCCcccccCC-CChHHHHHHhhccccccccccCCCCC
Q psy237 65 KALKQKLSQLQQS--GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDDPATVKTFVNRPALG 141 (236)
Q Consensus 65 ~~l~~~~~~~~~~--~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lG-h~hP~V~~Ai~~q~~~~~~~~~~~~~ 141 (236)
+..+.|.++.+.. ...+..+.+++|+|+++||.||++||||.+. ..+| |+||+|++|+++|+++..+.+.....
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~ 85 (402)
T PRK07505 9 KKRINRAEKFWDAAYDEGLNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSR 85 (402)
T ss_pred HHHHHhhHHHHHHHHhcccccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccc
Confidence 3345555555543 2345567899999999999999999999883 5788 99999999999999875311111110
Q ss_pred CCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccch
Q psy237 142 VFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHI 185 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~ 185 (236)
.....+..+.+++.|....+. . ..+.++|+++++.++
T Consensus 86 ~~~~~~~~~~l~~~la~~~~~-~------~~~~~sG~~a~~~ai 122 (402)
T PRK07505 86 TRVRSQILKDLEEALSELFGA-S------VLTFTSCSAAHLGIL 122 (402)
T ss_pred hhhhhHHHHHHHHHHHHHhCC-C------EEEECChHHHHHHHH
Confidence 111233445555545444432 2 455567888887655
No 88
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.12 E-value=7e-11 Score=107.95 Aligned_cols=96 Identities=23% Similarity=0.309 Sum_probs=70.8
Q ss_pred cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 80 VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 80 ~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
.++|+++++++|++|||.||++||||.+|+++.+|||+||.|.+++.+++++..+..+ .+.++...++++++.+ .
T Consensus 7 ~~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~l~~~la~----~ 81 (379)
T TIGR00707 7 GRLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSN-LYYTEPQEELAEKLVE----H 81 (379)
T ss_pred CCCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHh----h
Confidence 3678999999999999999999999999999999999999999999999987644322 1223333334444443 3
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++ .+ ....+++|+++...++.
T Consensus 82 ~g-~~-----~~~~~~sg~~a~~~a~~ 102 (379)
T TIGR00707 82 SG-AD-----RVFFCNSGAEANEAALK 102 (379)
T ss_pred CC-CC-----EEEEeCCcHHHHHHHHH
Confidence 33 22 36777888887776543
No 89
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.95 E-value=3.4e-10 Score=107.00 Aligned_cols=51 Identities=31% Similarity=0.490 Sum_probs=46.4
Q ss_pred eeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 168 DYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 168 ~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
.+++++|+++||++|++||||++|+++.++||+||+|++|+++ +++.|+..
T Consensus 41 ~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~ 93 (447)
T COG0160 41 VIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT 93 (447)
T ss_pred eEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccC
Confidence 3469999999999999999999999999999999999999999 55777764
No 90
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.63 E-value=1.7e-08 Score=95.21 Aligned_cols=48 Identities=17% Similarity=0.275 Sum_probs=43.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|+++||++|++||||++|++++++||+||+|++|+++ +++.|+.
T Consensus 27 ~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~ 76 (425)
T PRK07495 27 DRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTC 76 (425)
T ss_pred EeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcc
Confidence 58999999999999999999999999999999999999999 4455554
No 91
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.62 E-value=2.3e-08 Score=93.79 Aligned_cols=42 Identities=29% Similarity=0.455 Sum_probs=40.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++.||.+|++||||.+|++++++||+||+|++|+++|
T Consensus 22 ~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q 63 (412)
T TIGR02407 22 EKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDY 63 (412)
T ss_pred EecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999984
No 92
>KOG1404|consensus
Probab=98.61 E-value=1.8e-08 Score=92.87 Aligned_cols=49 Identities=27% Similarity=0.431 Sum_probs=45.3
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+.+++|++.+|.+|++|||+++|++++++|||||+|++|+.+ +++.|.+
T Consensus 36 Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t 86 (442)
T KOG1404|consen 36 IVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTT 86 (442)
T ss_pred EEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEee
Confidence 468999999999999999999999999999999999999999 4577776
No 93
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.61 E-value=2e-08 Score=95.24 Aligned_cols=49 Identities=22% Similarity=0.434 Sum_probs=44.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
+++.|+++||.+|++||||++|++++++||+||+|++|+.+ +++.|++.
T Consensus 29 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~ 79 (445)
T PRK08593 29 DHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTP 79 (445)
T ss_pred EeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccc
Confidence 58999999999999999999999999999999999999998 44556543
No 94
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.60 E-value=3.3e-08 Score=93.27 Aligned_cols=62 Identities=35% Similarity=0.614 Sum_probs=50.8
Q ss_pred hhhhhHhhhhhccCceeeeeeeeeeecceEEec-cccchhhhhccccccccCCCCHHHH--HhhhcC
Q psy237 148 WPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDV-DGNHILDVYTQISSVPLGYNHPALL--KIFDDP 211 (236)
Q Consensus 148 lAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA-~g~a~lD~~sg~~~~~lGh~~p~i~--~A~~~~ 211 (236)
+.+.|.++.. ..++++++.++++.|+++||. +|++||||++|++++++||+||+|+ +|+++|
T Consensus 4 ~~~~~~~~~~--~~~~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q 68 (431)
T TIGR03251 4 VHEVLSRHML--TDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRAR 68 (431)
T ss_pred HHHHHHHHhh--ccCCceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHH
Confidence 3455665442 445566655679999999996 9999999999999999999999999 899884
No 95
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.60 E-value=2.8e-08 Score=93.52 Aligned_cols=44 Identities=27% Similarity=0.518 Sum_probs=41.2
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
++++.|+++||.+|++||||.+|++++++||+||+|++|+++|.
T Consensus 25 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql 68 (425)
T PRK09264 25 FDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYL 68 (425)
T ss_pred EEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999833
No 96
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.59 E-value=2.2e-08 Score=94.93 Aligned_cols=49 Identities=18% Similarity=0.366 Sum_probs=44.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
+++.|+++||.+|++||||.+|++++++||+||+|++|+.+ +++.|.+.
T Consensus 28 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~ 78 (443)
T PRK08360 28 VKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTP 78 (443)
T ss_pred EecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCccc
Confidence 58999999999999999999999999999999999999999 44556554
No 97
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.57 E-value=2.9e-08 Score=92.10 Aligned_cols=48 Identities=25% Similarity=0.466 Sum_probs=43.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|++.||.+|++||||++|++++++||+||+|++|+.+ +++.+.+
T Consensus 27 ~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~ 76 (396)
T PRK04073 27 SEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTS 76 (396)
T ss_pred EeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccc
Confidence 58999999999999999999999999999999999999998 4444443
No 98
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.56 E-value=2.7e-08 Score=93.32 Aligned_cols=48 Identities=25% Similarity=0.466 Sum_probs=43.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
.+++|+++||.+|++||||++|++++++||+||+|++|+++| ++.|+.
T Consensus 20 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~ 69 (420)
T TIGR00700 20 ARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTC 69 (420)
T ss_pred EeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCcc
Confidence 489999999999999999999999999999999999999993 455544
No 99
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.56 E-value=4.2e-08 Score=92.05 Aligned_cols=49 Identities=24% Similarity=0.358 Sum_probs=43.8
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+.++.|+++||.+|++||||++|++++++||+||+|++|+.+ +++.|..
T Consensus 26 ~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~ 76 (408)
T PRK04612 26 LERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTS 76 (408)
T ss_pred EEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccc
Confidence 358999999999999999999999999999999999999999 4455553
No 100
>PRK07482 hypothetical protein; Provisional
Probab=98.55 E-value=3e-08 Score=94.48 Aligned_cols=42 Identities=17% Similarity=0.411 Sum_probs=40.6
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|+++||.+|++||||.+|++++++||+||+|++|+++|
T Consensus 37 ~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q 78 (461)
T PRK07482 37 EGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQ 78 (461)
T ss_pred EeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHH
Confidence 599999999999999999999999999999999999999993
No 101
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.55 E-value=2.4e-08 Score=94.38 Aligned_cols=59 Identities=22% Similarity=0.326 Sum_probs=53.3
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--CcccccccCCCCCcccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSDDKTSHIPTF 227 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~~~~~~~~~~ 227 (236)
++++.|.+.+|.+|++|||.+||+|++++||+||+|.+|+++ +++-|....+.+|.|++
T Consensus 30 i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~ 90 (449)
T COG0161 30 IVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAI 90 (449)
T ss_pred eeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHH
Confidence 358999999999999999999999999999999999999999 44667767889999865
No 102
>PRK06062 hypothetical protein; Provisional
Probab=98.55 E-value=2.6e-08 Score=94.60 Aligned_cols=48 Identities=21% Similarity=0.446 Sum_probs=43.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|+++||.+|++||||++|++++++||+||+|++|+++ +++.|+.
T Consensus 40 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~ 89 (451)
T PRK06062 40 AGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVA 89 (451)
T ss_pred EeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcC
Confidence 58999999999999999999999999999999999999999 4455554
No 103
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.55 E-value=3e-08 Score=94.02 Aligned_cols=50 Identities=24% Similarity=0.416 Sum_probs=44.5
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
++++.|+++||.+|++||||.+|++++++||+||+|++|+.+ +++.|+..
T Consensus 40 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~ 91 (451)
T PRK06918 40 AQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGF 91 (451)
T ss_pred EEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCccc
Confidence 358999999999999999999999999999999999999998 44555543
No 104
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.54 E-value=4e-08 Score=93.55 Aligned_cols=49 Identities=29% Similarity=0.561 Sum_probs=43.9
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++++|+++||.+|++||||++|++++++||+||+|++|+++ +++.|++
T Consensus 39 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~ 89 (457)
T PRK05639 39 PKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSM 89 (457)
T ss_pred EEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccc
Confidence 358999999999999999999999999999999999999999 4455554
No 105
>PRK06541 hypothetical protein; Provisional
Probab=98.53 E-value=3.3e-08 Score=94.18 Aligned_cols=48 Identities=19% Similarity=0.205 Sum_probs=43.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|+++||.+|++||||++|++++++||+||+|++|+++ +++.|..
T Consensus 39 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~ 88 (460)
T PRK06541 39 VRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFP 88 (460)
T ss_pred EeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCcc
Confidence 58999999999999999999999999999999999999999 4455544
No 106
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.52 E-value=4.7e-08 Score=92.57 Aligned_cols=49 Identities=29% Similarity=0.446 Sum_probs=43.9
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
+++.|+++||.+|++||||.+|++++++||+||+|++|+.+ +++.|.+.
T Consensus 41 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~ 91 (441)
T PRK05769 41 ERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL 91 (441)
T ss_pred EecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC
Confidence 58999999999999999999999999999999999999999 34555543
No 107
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.51 E-value=6.1e-08 Score=91.91 Aligned_cols=62 Identities=37% Similarity=0.618 Sum_probs=49.4
Q ss_pred hhhhHhhhhhccCceeeeeeeeeeecceEEec-cccchhhhhccccccccCCCCHHHHH--hhhcCc
Q psy237 149 PQLLENVLLKQSGSVSLFVDYQKSFGNYLVDV-DGNHILDVYTQISSVPLGYNHPALLK--IFDDPA 212 (236)
Q Consensus 149 AE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA-~g~a~lD~~sg~~~~~lGh~~p~i~~--A~~~~~ 212 (236)
.+.++.++. ..++++++.++++.|++.||. +|++||||++|++++++||+||+|++ |+++|.
T Consensus 12 ~~~~~~~~~--~~~~p~~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql 76 (443)
T PRK08297 12 HEVLARHIL--VDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAEL 76 (443)
T ss_pred hHHHHHHHh--hcCCCcceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHH
Confidence 344444332 344565555679999999996 99999999999999999999999999 999844
No 108
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.51 E-value=3.8e-08 Score=92.76 Aligned_cols=54 Identities=20% Similarity=0.247 Sum_probs=45.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--CcccccccCCCCC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSDDKTSH 223 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~~~~~~ 223 (236)
.+++|++.||.+|++||||.+|++++++||+||+|++|+++ +++.|.......+
T Consensus 27 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~ 82 (422)
T PRK05630 27 TSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTH 82 (422)
T ss_pred EeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCC
Confidence 48999999999999999999999999999999999999999 4455554433333
No 109
>KOG1402|consensus
Probab=98.51 E-value=6.3e-08 Score=87.84 Aligned_cols=57 Identities=23% Similarity=0.373 Sum_probs=47.6
Q ss_pred ccCceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 159 QSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 159 ~ap~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
.+...+. .+.++.|+..||..|++|+||.|++++++.|||||+|++|+++ +++...|
T Consensus 37 nyhpLpv--vf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlss 95 (427)
T KOG1402|consen 37 NYHPLPV--VFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSS 95 (427)
T ss_pred cCCcCce--EEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhh
Confidence 3444443 3468999999999999999999999999999999999999999 5455544
No 110
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.51 E-value=3.9e-08 Score=93.66 Aligned_cols=54 Identities=20% Similarity=0.190 Sum_probs=45.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--CcccccccCCCCC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSDDKTSH 223 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~~~~~~ 223 (236)
+++.|+++||.+|++||||+++++++++||+||+|++|+.+ +++.|.+.....+
T Consensus 43 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~ 98 (460)
T PRK06916 43 ERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLGLAN 98 (460)
T ss_pred EeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccccCC
Confidence 58999999999999999999999999999999999999998 4455554333333
No 111
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.51 E-value=4.9e-08 Score=91.83 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=43.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|+++||.+|++||||++|++++++||+||+|++|+++ +++.|+.
T Consensus 27 ~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~ 76 (421)
T PRK06777 27 ERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTA 76 (421)
T ss_pred EeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhccccc
Confidence 58999999999999999999999999999999999999999 4455554
No 112
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.51 E-value=4.4e-08 Score=91.92 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=43.2
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
.++.|+++||.+|++||||.+|++++++||+||+|++|+++ +++.+.+
T Consensus 29 ~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~ 78 (423)
T PRK05964 29 VRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVI 78 (423)
T ss_pred EeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCcc
Confidence 48999999999999999999999999999999999999998 4455543
No 113
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.50 E-value=3.6e-08 Score=93.14 Aligned_cols=54 Identities=20% Similarity=0.261 Sum_probs=46.2
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--CcccccccCCCCC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSDDKTSH 223 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~~~~~~ 223 (236)
+++.|+++||.+|++||||++|+++.++||+||+|++|+++ +++.|+......+
T Consensus 31 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~ 86 (429)
T PRK06173 31 ERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTH 86 (429)
T ss_pred EeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCC
Confidence 58999999999999999999999999999999999999999 4455655433333
No 114
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.50 E-value=4.5e-08 Score=92.45 Aligned_cols=49 Identities=24% Similarity=0.282 Sum_probs=43.9
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
..+.|++.||.+|++||||.+|++++++||+||+|++|+++ +++.|.+.
T Consensus 30 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~ 80 (428)
T PRK07986 30 VSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF 80 (428)
T ss_pred EeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccc
Confidence 58999999999999999999999999999999999999998 44555543
No 115
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.50 E-value=4.5e-08 Score=92.63 Aligned_cols=49 Identities=20% Similarity=0.397 Sum_probs=43.5
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
++++.|+++||.+|++||||++|++++++||+||+|++|+++| ++.|..
T Consensus 42 i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~ 92 (443)
T PRK06058 42 VARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTC 92 (443)
T ss_pred EEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCcc
Confidence 3589999999999999999999999999999999999999993 444443
No 116
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.50 E-value=4.2e-08 Score=92.88 Aligned_cols=44 Identities=30% Similarity=0.529 Sum_probs=41.2
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
++++.|+++||.+|++||||.+|++++++||+||+|++|+++|.
T Consensus 25 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~ 68 (442)
T TIGR00709 25 FAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYL 68 (442)
T ss_pred EEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999843
No 117
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.49 E-value=4.8e-08 Score=93.39 Aligned_cols=50 Identities=18% Similarity=0.207 Sum_probs=44.3
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--ccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCSD 218 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~~ 218 (236)
++++.|+++||.+|++||||++|++++++||+||+|++|+++| ++.|.+.
T Consensus 50 i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~ 101 (472)
T PRK08742 50 IARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVML 101 (472)
T ss_pred EEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccc
Confidence 3589999999999999999999999999999999999999984 3555543
No 118
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.49 E-value=4.3e-08 Score=93.18 Aligned_cols=50 Identities=20% Similarity=0.249 Sum_probs=44.5
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
++++.|+++||.+|++||||++|++++++||+||+|++|+++ +++.|.+.
T Consensus 40 i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~ 91 (453)
T PRK06943 40 VARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML 91 (453)
T ss_pred EEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 358999999999999999999999999999999999999999 44555544
No 119
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=98.49 E-value=5.3e-08 Score=91.34 Aligned_cols=65 Identities=26% Similarity=0.407 Sum_probs=52.5
Q ss_pred ceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc-ccccccCCCCCccccc
Q psy237 162 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA-TVKCSDDKTSHIPTFA 228 (236)
Q Consensus 162 ~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~-~~~~~~~~~~~~~~~~ 228 (236)
..|++++ ++.|+++||.||++|+||+.+|+...+||+||.|++|++++. ...++..+++.....|
T Consensus 34 ~~P~fi~--~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~~fg~Pte~Ei~~A 99 (432)
T COG0001 34 GYPIFIE--RGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSFGAPTELEVELA 99 (432)
T ss_pred CCCeeEE--eccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 3555545 999999999999999999999999999999999999999944 4444456666555443
No 120
>PRK07481 hypothetical protein; Provisional
Probab=98.49 E-value=4.8e-08 Score=92.74 Aligned_cols=48 Identities=23% Similarity=0.297 Sum_probs=43.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
+++.|+++||.+|++||||++|++++++||+||+|++|+++| .+.|++
T Consensus 29 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~ 78 (449)
T PRK07481 29 VRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYS 78 (449)
T ss_pred EeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhcccee
Confidence 589999999999999999999999999999999999999983 455554
No 121
>PRK05965 hypothetical protein; Provisional
Probab=98.49 E-value=4.7e-08 Score=93.06 Aligned_cols=48 Identities=19% Similarity=0.410 Sum_probs=43.2
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
++++|++.||++|++||||++|++++++||+||+|++|+++| ++.|..
T Consensus 33 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~ 82 (459)
T PRK05965 33 ASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYAT 82 (459)
T ss_pred EeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcc
Confidence 589999999999999999999999999999999999999994 344543
No 122
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.48 E-value=5.4e-08 Score=91.53 Aligned_cols=48 Identities=25% Similarity=0.383 Sum_probs=43.2
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
++++|+++||.+|++||||++|++++++||+||+|++|+++ +++.|..
T Consensus 27 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~ 76 (421)
T PRK09792 27 QSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTA 76 (421)
T ss_pred EeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcc
Confidence 58999999999999999999999999999999999999999 3345543
No 123
>PRK06917 hypothetical protein; Provisional
Probab=98.48 E-value=5.3e-08 Score=92.41 Aligned_cols=42 Identities=19% Similarity=0.313 Sum_probs=40.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|+++||++|++||||++|++++++||+||+|++|+++|
T Consensus 18 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~q 59 (447)
T PRK06917 18 SHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQ 59 (447)
T ss_pred EeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999993
No 124
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.48 E-value=7.5e-08 Score=91.94 Aligned_cols=44 Identities=70% Similarity=1.207 Sum_probs=41.5
Q ss_pred eeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 168 DYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 168 ~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
.++++.|+++||.+|++||||++|++++++||+||+|++|++++
T Consensus 43 ~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q 86 (464)
T TIGR00699 43 DYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSP 86 (464)
T ss_pred EEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHH
Confidence 44699999999999999999999999999999999999999973
No 125
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.48 E-value=5.4e-08 Score=92.29 Aligned_cols=49 Identities=20% Similarity=0.289 Sum_probs=43.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
+++.|++.||.+|++||||.+|++++++||+||+|++|+++ +.+.|.+.
T Consensus 36 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~ 86 (445)
T PRK09221 36 VSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA 86 (445)
T ss_pred EeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc
Confidence 58999999999999999999999999999999999999998 33555543
No 126
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.47 E-value=8.1e-08 Score=90.42 Aligned_cols=48 Identities=25% Similarity=0.432 Sum_probs=43.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|++.||.+|++||||++|++++++||+||+|++|+.+ +++.|.+
T Consensus 30 ~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~ 79 (433)
T PRK08117 30 VKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGP 79 (433)
T ss_pred EeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcc
Confidence 58999999999999999999999999999999999999999 3455544
No 127
>PRK07483 hypothetical protein; Provisional
Probab=98.47 E-value=5.5e-08 Score=92.18 Aligned_cols=42 Identities=26% Similarity=0.414 Sum_probs=40.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|+++||.+|++||||++|++++++||+||+|++|+++|
T Consensus 17 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~q 58 (443)
T PRK07483 17 VAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQ 58 (443)
T ss_pred EeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999993
No 128
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.47 E-value=6.8e-08 Score=91.97 Aligned_cols=43 Identities=35% Similarity=0.618 Sum_probs=40.9
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
.++.|+++||.+|++||||++|++++++||+||+|++|+++|.
T Consensus 45 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~ 87 (459)
T PRK06931 45 AKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVL 87 (459)
T ss_pred EeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999843
No 129
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.46 E-value=6.5e-08 Score=92.30 Aligned_cols=49 Identities=18% Similarity=0.243 Sum_probs=43.9
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
.++.|++.||.+|++||||++|++++++||+||+|++|+++ +++.|.+.
T Consensus 34 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~ 84 (466)
T PRK07030 34 RRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIL 84 (466)
T ss_pred EeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccc
Confidence 58999999999999999999999999999999999999998 44555543
No 130
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.46 E-value=1.2e-07 Score=88.52 Aligned_cols=48 Identities=25% Similarity=0.347 Sum_probs=43.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
+++.|++.||.+|++||||.+|++++++||+||+|++|+.++ ++.|+.
T Consensus 26 ~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~ 75 (406)
T PRK12381 26 VRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTG 75 (406)
T ss_pred EEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhccccc
Confidence 589999999999999999999999999999999999999994 344543
No 131
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.45 E-value=8.3e-08 Score=88.90 Aligned_cols=49 Identities=27% Similarity=0.405 Sum_probs=43.5
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
++++.|++.||++|++||||++|++++++||+||+|++|+++ +.+.|+.
T Consensus 10 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~ 60 (364)
T PRK04013 10 LVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAG 60 (364)
T ss_pred EEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCcc
Confidence 358999999999999999999999999999999999999998 3344543
No 132
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.45 E-value=9e-08 Score=90.20 Aligned_cols=44 Identities=30% Similarity=0.551 Sum_probs=41.2
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
++++.|+++||.+|++||||++|++++++||+||+|++|+.+|.
T Consensus 39 ~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~ 82 (428)
T PRK12389 39 MERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAA 82 (428)
T ss_pred EEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999843
No 133
>PRK07678 aminotransferase; Validated
Probab=98.44 E-value=8.2e-08 Score=91.20 Aligned_cols=42 Identities=26% Similarity=0.449 Sum_probs=40.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
.+++|+++||.+|++||||++|++++++||+||+|++|+++|
T Consensus 34 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q 75 (451)
T PRK07678 34 AKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQ 75 (451)
T ss_pred EeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999983
No 134
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.44 E-value=7e-08 Score=91.46 Aligned_cols=48 Identities=19% Similarity=0.261 Sum_probs=43.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
+++.|+++||.+|++||||++|++++++||+||+|++|+++| ++.|..
T Consensus 33 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~ 82 (442)
T PRK13360 33 VAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAP 82 (442)
T ss_pred EeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcc
Confidence 589999999999999999999999999999999999999983 344444
No 135
>PRK12403 putative aminotransferase; Provisional
Probab=98.44 E-value=7.4e-08 Score=91.72 Aligned_cols=48 Identities=23% Similarity=0.218 Sum_probs=43.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|+++||.+|++||||++|+++.++||+||+|++|+++ +++.+.+
T Consensus 41 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~ 90 (460)
T PRK12403 41 VRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYN 90 (460)
T ss_pred EeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCee
Confidence 58999999999999999999999999999999999999999 4455544
No 136
>PLN00144 acetylornithine transaminase
Probab=98.43 E-value=8.2e-08 Score=89.15 Aligned_cols=48 Identities=27% Similarity=0.364 Sum_probs=42.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|++.||.+|++||||++|++++++||+||+|++|+.+ +++.|.+
T Consensus 2 ~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~ 51 (382)
T PLN00144 2 VSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVS 51 (382)
T ss_pred eeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCcc
Confidence 37899999999999999999999999999999999999999 3344543
No 137
>PRK07036 hypothetical protein; Provisional
Probab=98.42 E-value=8.6e-08 Score=91.47 Aligned_cols=48 Identities=23% Similarity=0.344 Sum_probs=43.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
.++.|++.||.+|++||||++|++++++||+||+|++|+++| ++.|.+
T Consensus 38 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~ 87 (466)
T PRK07036 38 VEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYT 87 (466)
T ss_pred EeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccc
Confidence 489999999999999999999999999999999999999984 344544
No 138
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.42 E-value=9.7e-08 Score=91.09 Aligned_cols=44 Identities=25% Similarity=0.565 Sum_probs=41.3
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
+.++.|+++||.+|++||||++|++++++||+||+|++|+++|.
T Consensus 49 i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql 92 (464)
T PRK06938 49 LKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVL 92 (464)
T ss_pred EEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999843
No 139
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.41 E-value=1.1e-07 Score=89.75 Aligned_cols=42 Identities=26% Similarity=0.430 Sum_probs=40.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|+++||.+|++||||.+|++++++||+||+|++|+++|
T Consensus 35 ~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q 76 (431)
T PRK06209 35 QRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREA 76 (431)
T ss_pred EeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999983
No 140
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.41 E-value=1e-07 Score=90.48 Aligned_cols=48 Identities=21% Similarity=0.304 Sum_probs=42.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
+.+.|++.||++|++||||++|++++++||+||+|++|+++| ++.+.+
T Consensus 62 ~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~ 111 (442)
T TIGR03372 62 QAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS 111 (442)
T ss_pred EeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc
Confidence 567779999999999999999999999999999999999994 344443
No 141
>PRK07480 putative aminotransferase; Validated
Probab=98.41 E-value=8.8e-08 Score=91.17 Aligned_cols=48 Identities=27% Similarity=0.364 Sum_probs=43.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
.++.|++.||.+|++||||++|++++++||+||+|++|+++ +++.|.+
T Consensus 37 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~ 86 (456)
T PRK07480 37 TRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYN 86 (456)
T ss_pred EeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc
Confidence 48999999999999999999999999999999999999999 3444443
No 142
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.40 E-value=1.2e-07 Score=90.31 Aligned_cols=42 Identities=21% Similarity=0.401 Sum_probs=40.4
Q ss_pred eeeec-ceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFG-NYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G-~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
.++.| +++||++|++||||++|++++++||+||+|++|+.+|
T Consensus 68 ~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q 110 (459)
T PRK11522 68 WQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQ 110 (459)
T ss_pred EeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHH
Confidence 58999 9999999999999999999999999999999999993
No 143
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.39 E-value=2e-07 Score=86.78 Aligned_cols=42 Identities=26% Similarity=0.397 Sum_probs=40.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++.||.+|++||||.+|+++.++||+||+|++|+.++
T Consensus 22 ~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~ 63 (397)
T TIGR03246 22 VRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQ 63 (397)
T ss_pred EEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999984
No 144
>PLN02624 ornithine-delta-aminotransferase
Probab=98.39 E-value=1.8e-07 Score=89.44 Aligned_cols=43 Identities=26% Similarity=0.516 Sum_probs=40.7
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+.++.|+++||.+|++||||.+|++++++||+||+|++|++++
T Consensus 61 ~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~q 103 (474)
T PLN02624 61 FSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQ 103 (474)
T ss_pred EEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999993
No 145
>PRK06105 aminotransferase; Provisional
Probab=98.38 E-value=1.1e-07 Score=90.52 Aligned_cols=47 Identities=19% Similarity=0.292 Sum_probs=42.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--ccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKC 216 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~ 216 (236)
+++.|++.||.+|++||||++|++++++||+||+|++|+++| ++.++
T Consensus 35 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~ 83 (460)
T PRK06105 35 ERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFY 83 (460)
T ss_pred EeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCe
Confidence 589999999999999999999999999999999999999993 44443
No 146
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.38 E-value=1.9e-07 Score=89.42 Aligned_cols=43 Identities=23% Similarity=0.386 Sum_probs=40.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
+++.|++.||.+|++||||.+|++++++||+||+|++|+++|.
T Consensus 86 ~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql 128 (474)
T PLN02482 86 DRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETM 128 (474)
T ss_pred EEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999933
No 147
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.37 E-value=1.7e-07 Score=88.78 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=40.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
+++.|+++||++|++||||.+|++++++||+||+|++|++++.
T Consensus 40 ~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~ 82 (433)
T PRK00615 40 SSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGA 82 (433)
T ss_pred EEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999843
No 148
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.37 E-value=1.5e-07 Score=90.67 Aligned_cols=48 Identities=25% Similarity=0.392 Sum_probs=43.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|++.||.+|++||||.+|+++.++||+||+|++|+++ +++.+.+
T Consensus 76 ~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~ 125 (504)
T PLN02760 76 EKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYH 125 (504)
T ss_pred EeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhcccee
Confidence 58999999999999999999999999999999999999999 3444443
No 149
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.35 E-value=2.3e-07 Score=85.62 Aligned_cols=42 Identities=31% Similarity=0.579 Sum_probs=40.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
.++.|++.||.+|++|+||.+|++++++||+||+|++|+.++
T Consensus 18 ~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~ 59 (389)
T PRK01278 18 ERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQ 59 (389)
T ss_pred EeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999994
No 150
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.34 E-value=1.1e-07 Score=87.05 Aligned_cols=48 Identities=35% Similarity=0.537 Sum_probs=40.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
+++.|+++||.+|++|+||.++++++++||+||+|.+|++++ ...+.+
T Consensus 3 ~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~ 52 (339)
T PF00202_consen 3 ERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVS 52 (339)
T ss_dssp EEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCS
T ss_pred EEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhccccc
Confidence 489999999999999999999999999999999999999983 344443
No 151
>PRK07046 aminotransferase; Validated
Probab=98.32 E-value=2.8e-07 Score=87.70 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=40.9
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
++++.|+++||.+|++||||.+++++.++||+||+|++|++++
T Consensus 61 ~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q 103 (453)
T PRK07046 61 VAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQ 103 (453)
T ss_pred EEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHH
Confidence 3599999999999999999999999999999999999999983
No 152
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.32 E-value=3.1e-07 Score=85.78 Aligned_cols=47 Identities=19% Similarity=0.325 Sum_probs=42.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--ccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKC 216 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~ 216 (236)
+++.|++.||.+|++||||.+|++++++||+||+|++|+.++ ++.+.
T Consensus 23 ~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~ 71 (395)
T PRK03715 23 THGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINP 71 (395)
T ss_pred EeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccc
Confidence 589999999999999999999999999999999999999984 34444
No 153
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.27 E-value=6.8e-07 Score=83.16 Aligned_cols=42 Identities=29% Similarity=0.456 Sum_probs=40.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|+++||.+|++|+||.+|+++.++||+||+|.+|+.++
T Consensus 27 ~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~ 68 (403)
T PRK05093 27 VRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQ 68 (403)
T ss_pred EEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999983
No 154
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.27 E-value=4.1e-07 Score=85.46 Aligned_cols=47 Identities=19% Similarity=0.276 Sum_probs=42.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKC 216 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~ 216 (236)
+++.|++.||++|++||||.+|++++++||+||+|++|+.+ +.+.|.
T Consensus 28 ~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~ 76 (425)
T PRK08088 28 DRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHT 76 (425)
T ss_pred EeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCc
Confidence 58999999999999999999999999999999999999998 344444
No 155
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.26 E-value=5.6e-07 Score=83.32 Aligned_cols=48 Identities=29% Similarity=0.411 Sum_probs=42.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
.++.|++.||.+|++||||.++++++++||+||+|.+|+.+ ++..+.+
T Consensus 28 ~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~ 77 (401)
T PRK00854 28 TRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTS 77 (401)
T ss_pred EeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccc
Confidence 58999999999999999999999999999999999999999 3344433
No 156
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.24 E-value=5e-07 Score=84.47 Aligned_cols=42 Identities=31% Similarity=0.561 Sum_probs=40.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
.++.|+++||.+|++||||.+|++++++||+||+|++|+.++
T Consensus 35 ~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q 76 (423)
T TIGR00713 35 ARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEA 76 (423)
T ss_pred EeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999983
No 157
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.20 E-value=6.5e-07 Score=82.67 Aligned_cols=48 Identities=25% Similarity=0.398 Sum_probs=42.9
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
+.+.|++.||++|++||||.+++++.++||+||+|++|+.++ .+.|.+
T Consensus 18 ~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~ 67 (400)
T PTZ00125 18 KRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTS 67 (400)
T ss_pred EeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhccccc
Confidence 589999999999999999999999999999999999999984 444443
No 158
>KOG1405|consensus
Probab=98.18 E-value=1e-06 Score=80.85 Aligned_cols=64 Identities=56% Similarity=0.938 Sum_probs=52.3
Q ss_pred ceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc-Cccccccc-CCCCCcc
Q psy237 162 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD-PATVKCSD-DKTSHIP 225 (236)
Q Consensus 162 ~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~-~~~~~~~~-~~~~~~~ 225 (236)
...++.+++...|+++.|+|||++||.+++|+++.+||+||.++++++. +.+....+ ....++|
T Consensus 55 ~v~F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~fP 120 (484)
T KOG1405|consen 55 AVHFFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRPALGNFP 120 (484)
T ss_pred ceEEehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccccccCCC
Confidence 3456678899999999999999999999999999999999999999998 44444333 4455555
No 159
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.17 E-value=6.7e-07 Score=84.37 Aligned_cols=41 Identities=27% Similarity=0.323 Sum_probs=39.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
.++.|++.||.+|++||||.+++++.++||+||+|++|+.+
T Consensus 32 ~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ 72 (427)
T TIGR00508 32 ESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQK 72 (427)
T ss_pred EeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999998
No 160
>KOG1401|consensus
Probab=98.16 E-value=1.1e-06 Score=81.70 Aligned_cols=61 Identities=16% Similarity=0.278 Sum_probs=51.2
Q ss_pred cCceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--CcccccccCCCC
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSDDKTS 222 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~~~~~ 222 (236)
+.+.+++++ .++|+..+|.+|++|+||+++|++..+||+||+|.+|+.+ .++.|.+....+
T Consensus 35 ~a~~pv~~~--~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t 97 (433)
T KOG1401|consen 35 YARYPVVIE--SGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFT 97 (433)
T ss_pred cCCCceeee--cceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCcccc
Confidence 444555444 8999999999999999999999999999999999999999 557788754443
No 161
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.11 E-value=1.6e-06 Score=79.58 Aligned_cols=43 Identities=28% Similarity=0.418 Sum_probs=40.6
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
++++.|++.||++|++||||.++++++++||+||+|++|+.++
T Consensus 15 ~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~ 57 (377)
T PRK02936 15 IVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQ 57 (377)
T ss_pred EEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999983
No 162
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.09 E-value=1.4e-06 Score=83.11 Aligned_cols=42 Identities=29% Similarity=0.535 Sum_probs=38.4
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
++++.|+++||.+|++||||.+ .+++++||+||+|++|+++|
T Consensus 58 i~~a~G~~l~D~dG~~ylD~~g-~~~~~lGh~~p~v~~Ai~~q 99 (459)
T PRK06082 58 LASAEGIYIEDVDGKKYMDFHG-NNVHQLGYGHPHVIEKVKEQ 99 (459)
T ss_pred EEeeeeeEEEECCCCEEEEccc-HhhcccCCCCHHHHHHHHHH
Confidence 3589999999999999999985 59999999999999999994
No 163
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.08 E-value=2.5e-06 Score=79.24 Aligned_cols=42 Identities=31% Similarity=0.485 Sum_probs=39.9
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
..+.|++++|.+|++||||.+++++.++||+||+|++|+.++
T Consensus 24 ~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~ 65 (401)
T TIGR01885 24 SKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQ 65 (401)
T ss_pred EeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHH
Confidence 479999999999999999999999999999999999999984
No 164
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=97.94 E-value=3.8e-06 Score=79.11 Aligned_cols=43 Identities=33% Similarity=0.558 Sum_probs=40.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
..+.|++.||++|++||||.+|+++.++||+||+|++|+.++.
T Consensus 37 ~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~ 79 (426)
T PRK00062 37 ERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAA 79 (426)
T ss_pred EeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999999833
No 165
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=97.88 E-value=2.2e-05 Score=71.45 Aligned_cols=49 Identities=29% Similarity=0.357 Sum_probs=41.2
Q ss_pred ccccceeeecccccEEEeCCCCEEEeccCCcccccCCC-ChHHHHHHhhcccccc
Q psy237 79 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVK 132 (236)
Q Consensus 79 ~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~ 132 (236)
+...| ++++++|++||+ +|++|||+.++. ++|| .+|+|++++++++...
T Consensus 20 ~~~~~-~~~~~~g~~~~~-~g~~~id~~~~~---~~g~~~~~~v~~a~~~~~~~~ 69 (385)
T PRK05958 20 YRSLR-PREGGAGRWLVV-DGRRMLNFASND---YLGLARHPRLIAAAQQAARRY 69 (385)
T ss_pred Ccccc-ccccCCCceeEe-CCceEEEeeCCC---cccCCCCHHHHHHHHHHHHhc
Confidence 33344 589999999997 999999999873 5898 7999999999998764
No 166
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=97.85 E-value=1.6e-05 Score=72.84 Aligned_cols=48 Identities=17% Similarity=0.292 Sum_probs=41.9
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCC-ChHHHHHHhhcccccc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVK 132 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~ 132 (236)
++|..+.+++|+||| .||++||||.++ ..+|| .+|++++++.+++.+.
T Consensus 15 ~~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~ 63 (385)
T TIGR01825 15 ISIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQY 63 (385)
T ss_pred ccccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHc
Confidence 367889999999999 999999999775 34799 9999999999988754
No 167
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=97.84 E-value=8.8e-06 Score=74.87 Aligned_cols=41 Identities=32% Similarity=0.466 Sum_probs=39.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.||.+|++|+||.+|++++++||+||+|.+|+.+
T Consensus 26 ~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~ 66 (396)
T PRK02627 26 VRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQE 66 (396)
T ss_pred EeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999988
No 168
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=97.84 E-value=1.1e-05 Score=74.63 Aligned_cols=41 Identities=32% Similarity=0.493 Sum_probs=39.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
..+.|++.||.+|++|+||.++++++++||+||+|.+|+.+
T Consensus 30 ~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~ 70 (398)
T PRK03244 30 VRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTR 70 (398)
T ss_pred EEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHH
Confidence 48899999999999999999999999999999999999998
No 169
>PRK06148 hypothetical protein; Provisional
Probab=97.80 E-value=1.1e-05 Score=83.92 Aligned_cols=42 Identities=24% Similarity=0.565 Sum_probs=38.4
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
++++.|+++||++|++||||++++ +++||+||+|++|+.+|.
T Consensus 610 i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~ 651 (1013)
T PRK06148 610 FVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQA 651 (1013)
T ss_pred EEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHH
Confidence 469999999999999999999984 889999999999999943
No 170
>PRK07179 hypothetical protein; Provisional
Probab=97.77 E-value=3.8e-05 Score=71.38 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=41.9
Q ss_pred cccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 74 LQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 74 ~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
++.....+.++++.+++|.+++|.+||.|||+. +||+|++++.+|+++.
T Consensus 36 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~ 84 (407)
T PRK07179 36 RVNKNWNGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEE 84 (407)
T ss_pred hhccCcCCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHh
Confidence 333444567888999999999999999999987 8999999999999875
No 171
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=97.72 E-value=1.8e-05 Score=72.78 Aligned_cols=41 Identities=37% Similarity=0.683 Sum_probs=39.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
++++|+++||.+|++||||.+++++.++|| ||+|.+|+.++
T Consensus 16 ~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~ 56 (375)
T PRK04260 16 VKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQ 56 (375)
T ss_pred EEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHH
Confidence 589999999999999999999999999999 99999999983
No 172
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=97.59 E-value=3.3e-05 Score=71.25 Aligned_cols=42 Identities=38% Similarity=0.690 Sum_probs=39.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
..+.|.+.||.+|++||||.++++..++||+||+|.+|+.++
T Consensus 23 ~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~ 64 (413)
T cd00610 23 VRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQ 64 (413)
T ss_pred EeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHH
Confidence 478999999999999999999999999999999999999883
No 173
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.54 E-value=3.7e-05 Score=78.13 Aligned_cols=59 Identities=12% Similarity=0.106 Sum_probs=50.9
Q ss_pred eeeecc----eEEecccc----chhhhhccccccccC-CCCHHHHHhhhc--CcccccccCCCCCccccc
Q psy237 170 QKSFGN----YLVDVDGN----HILDVYTQISSVPLG-YNHPALLKIFDD--PATVKCSDDKTSHIPTFA 228 (236)
Q Consensus 170 ~~~~G~----sgsDA~g~----a~lD~~sg~~~~~lG-h~~p~i~~A~~~--~~~~~~~~~~~~~~~~~~ 228 (236)
..+.|. +.+|.+|+ +|+|+.++++++++| |+||+|++|+.+ +++.|+.....+|.|++.
T Consensus 344 ~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~~~~~hepa~~ 413 (817)
T PLN02974 344 DSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALR 413 (817)
T ss_pred EeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCccccCccCCHHHHH
Confidence 478888 99999998 999999999999999 689999999999 557788766677777653
No 174
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=97.48 E-value=6.2e-05 Score=68.73 Aligned_cols=41 Identities=32% Similarity=0.592 Sum_probs=39.5
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.+|.+|++|+||.+|++.+++||+||+|.+|+.+
T Consensus 14 ~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~ 54 (379)
T TIGR00707 14 VRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKE 54 (379)
T ss_pred EEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999988
No 175
>PRK06149 hypothetical protein; Provisional
Probab=97.45 E-value=6.4e-05 Score=77.83 Aligned_cols=42 Identities=24% Similarity=0.400 Sum_probs=37.9
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
++++.|++.||.+|++||||++++ .++||+||+|++|+.+|.
T Consensus 571 i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~ 612 (972)
T PRK06149 571 IERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQW 612 (972)
T ss_pred EEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHH
Confidence 458999999999999999999986 489999999999999843
No 176
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=97.33 E-value=0.00048 Score=63.00 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=40.1
Q ss_pred ceeeecccccEEEeCCCCEEEeccCCcccccCCC-ChHHHHHHhhcccccc
Q psy237 83 FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVK 132 (236)
Q Consensus 83 p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~ 132 (236)
+..+++++|.+|||+||+.||||.+| ..+|| .+|++.+++.+++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~ 72 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSH 72 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHc
Confidence 35689999999999999999999876 24788 7999999999988764
No 177
>PRK07505 hypothetical protein; Provisional
Probab=97.19 E-value=0.0002 Score=66.59 Aligned_cols=41 Identities=22% Similarity=0.299 Sum_probs=36.7
Q ss_pred eeeeecceEEeccccchhhhhccccccccC-CCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lG-h~~p~i~~A~~~~~ 212 (236)
++.+.|++.||.+|++||||.+ +.++| |+||+|++|+.++.
T Consensus 32 ~~~~~G~~~~d~~g~~~ld~~s---~~~lgl~~~p~v~~A~~~~l 73 (402)
T PRK07505 32 VGEREGILITLADGHTFVNFVS---CSYLGLDTHPAIIEGAVDAL 73 (402)
T ss_pred eeccCCccEEecCCceEEEeec---CCccCCCCCHHHHHHHHHHH
Confidence 3689999999999999999999 46889 99999999999843
No 178
>PLN02822 serine palmitoyltransferase
Probab=96.89 E-value=0.0013 Score=63.23 Aligned_cols=48 Identities=4% Similarity=0.042 Sum_probs=39.7
Q ss_pred eeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccccc
Q psy237 84 VDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTF 134 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~ 134 (236)
.++.+++|++++ +||++||||.++...... +||+|++|+++++++..+
T Consensus 94 ~~~~~~~G~~i~-~~G~~~id~~s~~~lgl~--~~~~i~ea~~~al~~~G~ 141 (481)
T PLN02822 94 PVLESAAGPHTI-INGKDVVNFASANYLGLI--GNEKIKESCTSALEKYGV 141 (481)
T ss_pred CceecCCCCeEE-ECCceEEEeECCCcCCCC--CCHHHHHHHHHHHHHhCC
Confidence 368899999999 899999999887553322 599999999999998543
No 179
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=96.80 E-value=0.0025 Score=57.18 Aligned_cols=43 Identities=23% Similarity=0.381 Sum_probs=37.4
Q ss_pred eecccccEEEeCCCCEEEeccCCcccccCCC-ChHHHHHHhhcccccc
Q psy237 86 YQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVK 132 (236)
Q Consensus 86 i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~ 132 (236)
+.+++|.++. .||++||||.+| .++|+ .||+|++++++++.+.
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~ 46 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQY 46 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhc
Confidence 5689999997 899999999997 46895 8999999999988763
No 180
>KOG1403|consensus
Probab=96.35 E-value=0.0017 Score=58.93 Aligned_cols=42 Identities=21% Similarity=0.479 Sum_probs=36.9
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
+.++.+.+.+|.+|++|||+++.++. .|||||+|++|+..|+
T Consensus 33 ivRaq~QYmfDE~g~~yLDCInNVaH--vghchp~VV~A~~kQm 74 (452)
T KOG1403|consen 33 IVRAQGQYMFDEEGTRYLDCINNVAH--VGHCHPEVVRAGAKQM 74 (452)
T ss_pred hehhccceeeccCcccHHHHhhhhhh--cccCCHHHHHHHHHHH
Confidence 45899999999999999999997654 5999999999998754
No 181
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=96.11 E-value=0.015 Score=53.44 Aligned_cols=49 Identities=20% Similarity=0.253 Sum_probs=41.6
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCC-hHHHHHHhhcccccc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYN-HPALLKIFDDPATVK 132 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~-hP~V~~Ai~~q~~~~ 132 (236)
+.+..+.++.|.++++.||+++|||.++ ..||++ +|+|++++.+++.+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~ 68 (393)
T TIGR01822 19 KSERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEH 68 (393)
T ss_pred CcccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHh
Confidence 3566788999999999999999999888 346777 999999999988763
No 182
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=96.05 E-value=0.014 Score=54.27 Aligned_cols=92 Identities=13% Similarity=0.074 Sum_probs=52.4
Q ss_pred eecccccEEEe-----CCCCEEEeccCCcccccCCC-ChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 86 YQKSFGNYLVD-----VDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 86 i~~a~G~~l~D-----~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
+.+..|.++.. .+|+++|+|.+.- =||- +||+|++|+++|+++..+....+....-.....+.+++.+...
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~ 102 (406)
T PRK13393 26 LERQAGAFPRATHHGPDGPREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADL 102 (406)
T ss_pred ccccCCCcceeEEeccCCCccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHH
Confidence 44555644332 2468999987752 2677 7999999999999987543211100000112334444444444
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+. + ...+.++|++++..++.
T Consensus 103 ~g~-~-----~~~~~~SG~~An~~ai~ 123 (406)
T PRK13393 103 HGK-E-----AALLFTSGYVSNWAALS 123 (406)
T ss_pred hCC-C-----cEEEeCCcHHHHHHHHH
Confidence 442 2 25566778887776554
No 183
>PRK09064 5-aminolevulinate synthase; Validated
Probab=93.76 E-value=0.13 Score=47.69 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=26.7
Q ss_pred CCEEEeccCCcccccCCCC-hHHHHHHhhcccccccc
Q psy237 99 GNHILDVYTQISSVPLGYN-HPALLKIFDDPATVKTF 134 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~-hP~V~~Ai~~q~~~~~~ 134 (236)
|+++|||.+. .-||++ ||+|++|+.+++++..+
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~ 78 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGA 78 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCC
Confidence 6999997764 237887 99999999999987654
No 184
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=91.38 E-value=0.3 Score=45.17 Aligned_cols=36 Identities=11% Similarity=0.208 Sum_probs=26.9
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhcccccccc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTF 134 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~ 134 (236)
.+|+++++|.+. ..+.|+ +||+|++|+++|+++..+
T Consensus 42 ~~~~~~~~~~sn-~ylgl~-~~p~v~~a~~~~~~~~~~ 77 (402)
T TIGR01821 42 DGAKDVTVWCSN-DYLGMG-QHPEVLQAMHETLDKYGA 77 (402)
T ss_pred CCCeeEEEeEcc-CcCCCC-CCHHHHHHHHHHHHHcCC
Confidence 356999997664 344454 499999999999998654
No 185
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=88.87 E-value=0.34 Score=43.95 Aligned_cols=38 Identities=29% Similarity=0.488 Sum_probs=33.2
Q ss_pred eeeeecceEEeccccchhhhhccccccccCC-CCHHHHHhhhc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDD 210 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh-~~p~i~~A~~~ 210 (236)
+.++.|.++++ +|+.|||+.++. ++|| .+|+|++|+.+
T Consensus 26 ~~~~~g~~~~~-~g~~~id~~~~~---~~g~~~~~~v~~a~~~ 64 (385)
T PRK05958 26 REGGAGRWLVV-DGRRMLNFASND---YLGLARHPRLIAAAQQ 64 (385)
T ss_pred cccCCCceeEe-CCceEEEeeCCC---cccCCCCHHHHHHHHH
Confidence 35899999997 999999999973 5898 78999999987
No 186
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=83.65 E-value=1.1 Score=41.49 Aligned_cols=34 Identities=12% Similarity=0.185 Sum_probs=26.2
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
||+++++|.+. ..+.|| +||+|++|+.+++++..
T Consensus 44 ~~~~~~~~~sn-~yl~l~-~~p~v~~a~~~~~~~~~ 77 (410)
T PRK13392 44 GPRRVTIWCSN-DYLGMG-QHPDVIGAMVDALDRYG 77 (410)
T ss_pred CCceEEEEECC-CccCCC-CCHHHHHHHHHHHHHcC
Confidence 57889997773 344555 58999999999998764
No 187
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=81.12 E-value=0.86 Score=41.55 Aligned_cols=37 Identities=22% Similarity=0.486 Sum_probs=32.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCC-CCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh-~~p~i~~A~~~ 210 (236)
.++.|++++ .+|+.++||.++ ..+|| .+|.+.+++.+
T Consensus 21 ~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~ 58 (385)
T TIGR01825 21 ESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQ 58 (385)
T ss_pred ccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHH
Confidence 478999999 999999999874 44899 89999999987
No 188
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=76.01 E-value=1.6 Score=38.94 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=30.5
Q ss_pred eeecceEEeccccchhhhhccccccccCC-CCHHHHHhhhc
Q psy237 171 KSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDD 210 (236)
Q Consensus 171 ~~~G~sgsDA~g~a~lD~~sg~~~~~lGh-~~p~i~~A~~~ 210 (236)
...|.+.. ++|++++||.++ .++|| ++|+|++|+.+
T Consensus 5 ~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~ 41 (360)
T TIGR00858 5 RGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQ 41 (360)
T ss_pred cCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHH
Confidence 56677774 899999999997 57996 89999999987
No 189
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=75.18 E-value=1.7 Score=39.56 Aligned_cols=38 Identities=24% Similarity=0.432 Sum_probs=32.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCC-CCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh-~~p~i~~A~~~ 210 (236)
+++.|.+++|++|+.++||.++ ..+|| .+|.+.+++.+
T Consensus 29 ~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~ 67 (397)
T PRK06939 29 TSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKA 67 (397)
T ss_pred cCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHH
Confidence 4788999999999999999875 34788 68999999887
No 190
>KOG1359|consensus
Probab=69.50 E-value=9.6 Score=35.09 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=53.0
Q ss_pred ceeeecccccEEEeCCC--CEEEeccCCcccccCCC-ChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 83 FVDYQKSFGNYLVDVDG--NHILDVYTQISSVPLGY-NHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 83 p~~i~~a~G~~l~D~dG--~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
--++++.+|..+. ++| +++|-|++.- =||- +||+|++|-.+.++....--...-...-...+.+.|+..+.++
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359|consen 49 ERVITSRQGPTIQ-VKGSDKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred eeEEeecccceEE-Eeccccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence 3578888888775 444 5688877653 2554 7999999988887764321100000112234566666656655
Q ss_pred cCceeeeeeeeeeecceEEecccc
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGN 183 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~ 183 (236)
..+-+ .-...++.||+-.
T Consensus 125 h~rED------~ilypscfdANag 142 (417)
T KOG1359|consen 125 HGRED------TILYPSCFDANAG 142 (417)
T ss_pred hCCCc------eEEeccccccchH
Confidence 55433 3334567777743
No 191
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=68.75 E-value=5.8 Score=35.27 Aligned_cols=30 Identities=17% Similarity=0.352 Sum_probs=24.0
Q ss_pred CEEEeccCCcccccCCCC-hHHHHHHhhcccccc
Q psy237 100 NHILDVYTQISSVPLGYN-HPALLKIFDDPATVK 132 (236)
Q Consensus 100 ~~yLD~~~g~~~~~lGh~-hP~V~~Ai~~q~~~~ 132 (236)
++||-|++. ..|||. ||+|++|+++.+++.
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~ 31 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKY 31 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHh
Confidence 467777664 358998 999999999999864
No 192
>PRK07179 hypothetical protein; Provisional
Probab=63.47 E-value=7.3 Score=36.07 Aligned_cols=32 Identities=22% Similarity=0.303 Sum_probs=28.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
.++.|...+|-.++.|||+. +||+|++|+.++
T Consensus 49 ~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~ 80 (407)
T PRK07179 49 GKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAA 80 (407)
T ss_pred ecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHH
Confidence 36788899999999999987 799999999883
No 193
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=61.07 E-value=8.1 Score=35.27 Aligned_cols=37 Identities=27% Similarity=0.465 Sum_probs=31.3
Q ss_pred eeecceEEeccccchhhhhccccccccCCC-CHHHHHhhhc
Q psy237 171 KSFGNYLVDVDGNHILDVYTQISSVPLGYN-HPALLKIFDD 210 (236)
Q Consensus 171 ~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~-~p~i~~A~~~ 210 (236)
...|...++++|+.++||.++ ..+|++ +|++++++.+
T Consensus 26 ~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~ 63 (393)
T TIGR01822 26 SPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKD 63 (393)
T ss_pred cCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHH
Confidence 566778888899999999887 567887 8999999887
No 194
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=59.49 E-value=24 Score=33.31 Aligned_cols=33 Identities=24% Similarity=0.436 Sum_probs=26.2
Q ss_pred CCCCEEEeccCCcccccCCC-ChHHHHHHhhcccccc
Q psy237 97 VDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVK 132 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~ 132 (236)
.+|++++||++.-- ||- +||+|++|+.+.+++.
T Consensus 36 ~~~~~~~nf~SNdY---LGLa~~~~~~~a~~~~~~~~ 69 (388)
T COG0156 36 ADGRKVLNFCSNDY---LGLASHPELIEAAKAAIRRY 69 (388)
T ss_pred cCCceeEeeeccCc---ccccCCHHHHHHHHHHHHHh
Confidence 45999999988732 554 5899999999998874
No 195
>PLN02955 8-amino-7-oxononanoate synthase
Probab=51.87 E-value=15 Score=35.56 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=25.4
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
.++++|||.+. ..+.|+ +||+|.+++.+.+++..
T Consensus 100 ~~r~~l~FsSn-dYLGL~-~~p~v~~a~~~ai~~yG 133 (476)
T PLN02955 100 RFKKLLLFSGN-DYLGLS-SHPTISNAAANAAKEYG 133 (476)
T ss_pred CCceEEEeecc-CccCCC-CCHHHHHHHHHHHHHcC
Confidence 56889997664 334454 79999999999888754
No 196
>PLN02822 serine palmitoyltransferase
Probab=49.19 E-value=10 Score=36.50 Aligned_cols=37 Identities=5% Similarity=0.133 Sum_probs=29.5
Q ss_pred eeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 171 KSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 171 ~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
.+.|++.+ .+|+.++||.++...... +||+|.+|+.+
T Consensus 98 ~~~G~~i~-~~G~~~id~~s~~~lgl~--~~~~i~ea~~~ 134 (481)
T PLN02822 98 SAAGPHTI-INGKDVVNFASANYLGLI--GNEKIKESCTS 134 (481)
T ss_pred cCCCCeEE-ECCceEEEeECCCcCCCC--CCHHHHHHHHH
Confidence 56788888 899999999987443333 59999999988
No 197
>PHA00008 J DNA packaging protein
Probab=33.70 E-value=27 Score=19.89 Aligned_cols=16 Identities=25% Similarity=0.320 Sum_probs=13.3
Q ss_pred ecccccEEEeCCCCEE
Q psy237 87 QKSFGNYLVDVDGNHI 102 (236)
Q Consensus 87 ~~a~G~~l~D~dG~~y 102 (236)
.+.+|++||-+-|..|
T Consensus 10 ~r~KGARLWYVGGtQf 25 (26)
T PHA00008 10 SRRKGARLWYVGGTQF 25 (26)
T ss_pred CccCceEEEEeccEEc
Confidence 4789999999988765
No 198
>PF04726 Microvir_J: Microvirus J protein; InterPro: IPR006815 This small protein is involved in DNA packaging, interacting with DNA via its hydrophobic C terminus. In bacteriophage phi-X174, J is present in 60 copies, and forms an S-shaped polypeptide chain without any secondary structure. It is thought to interact with DNA through simple charge interactions [].; GO: 0003677 DNA binding, 0019073 viral DNA genome packaging, 0019028 viral capsid; PDB: 1M06_J 1GFF_3 1RB8_J 2BPA_3.
Probab=32.88 E-value=21 Score=19.85 Aligned_cols=16 Identities=31% Similarity=0.306 Sum_probs=6.9
Q ss_pred ecccccEEEeCCCCEE
Q psy237 87 QKSFGNYLVDVDGNHI 102 (236)
Q Consensus 87 ~~a~G~~l~D~dG~~y 102 (236)
.+.+|++||-+-|..|
T Consensus 9 ~~~kgarlwyvgg~qf 24 (24)
T PF04726_consen 9 GKRKGARLWYVGGTQF 24 (24)
T ss_dssp -SSSSS----SSS---
T ss_pred CccCceEEEEecceeC
Confidence 4789999999888654
No 199
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=27.65 E-value=48 Score=30.18 Aligned_cols=23 Identities=22% Similarity=0.063 Sum_probs=19.5
Q ss_pred CCcccccCCCChHHHHHHhhccc
Q psy237 107 TQISSVPLGYNHPALLKIFDDPA 129 (236)
Q Consensus 107 ~g~~~~~lGh~hP~V~~Ai~~q~ 129 (236)
.+.++...||+||.+++++..|+
T Consensus 23 ~~l~~g~~~~~~p~~~~~~~~~~ 45 (398)
T cd00613 23 SFLGSGTYKHNPPAVIKRNILEN 45 (398)
T ss_pred ccccccccCCcCcHHHHHHhccc
Confidence 56667788999999999988887
No 200
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=26.28 E-value=32 Score=29.22 Aligned_cols=30 Identities=17% Similarity=0.422 Sum_probs=22.4
Q ss_pred eCCCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 96 DVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 96 D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
+.+|.++||+++|.|++. .||+.+.+....
T Consensus 41 ~i~g~~~LDlFAGSGaLG--------lEAlSRGA~~~~ 70 (187)
T COG0742 41 EIEGARVLDLFAGSGALG--------LEALSRGAARVV 70 (187)
T ss_pred ccCCCEEEEecCCccHhH--------HHHHhCCCceEE
Confidence 469999999999998753 467766665543
No 201
>PF05614 DUF782: Circovirus protein of unknown function (DUF782); InterPro: IPR008500 This family consists of porcine and bovine circovirus ORF3 proteins of unknown function.
Probab=26.03 E-value=41 Score=24.67 Aligned_cols=17 Identities=41% Similarity=1.278 Sum_probs=13.7
Q ss_pred ceee--ecccccCCCCCcc
Q psy237 5 RICT--VPYQYRTPKYPQN 21 (236)
Q Consensus 5 ~~~~--~~~~~~~~~~~~~ 21 (236)
|+|. -||.|.||.+|.|
T Consensus 18 rvckisspfafttprwphn 36 (104)
T PF05614_consen 18 RVCKISSPFAFTTPRWPHN 36 (104)
T ss_pred EEEeecCCceecCCCCCCC
Confidence 5665 4899999999987
No 202
>KOG1528|consensus
Probab=25.45 E-value=83 Score=28.95 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=34.0
Q ss_pred eeeecccccEEEeCCCC-------EEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 84 VDYQKSFGNYLVDVDGN-------HILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~-------~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.+|+.-.|--++|..|+ +||++-.|+-+.+ +-=||.|++|+++...+
T Consensus 295 ~iiV~EAGGvVtDa~G~pLDFs~Gr~L~~~~GiIvs~-~~L~~~il~av~~si~~ 348 (351)
T KOG1528|consen 295 SIIVHEAGGVVTDAAGKPLDFSKGRYLAHKTGIIVST-KKLHPKILEAVRESIEE 348 (351)
T ss_pred cEEEEecCceeecCCCCcccccCCceeecCCcEEEEc-hhhHHHHHHHHHHhhhh
Confidence 35666666678888886 5777767765554 77899999999886554
No 203
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=24.34 E-value=44 Score=28.23 Aligned_cols=16 Identities=44% Similarity=0.690 Sum_probs=9.8
Q ss_pred ecccccEEEeCCCCEE
Q psy237 87 QKSFGNYLVDVDGNHI 102 (236)
Q Consensus 87 ~~a~G~~l~D~dG~~y 102 (236)
+++.|.||.|++|++|
T Consensus 156 i~s~~~YlvdE~g~~f 171 (181)
T PF11422_consen 156 ISSDGQYLVDENGENF 171 (181)
T ss_dssp S-TTS--EEETT--EE
T ss_pred cCCCcceeEcCCCcch
Confidence 3899999999999987
No 204
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=22.91 E-value=69 Score=30.24 Aligned_cols=29 Identities=31% Similarity=0.511 Sum_probs=17.9
Q ss_pred cccEEEeCCCCEEEeccCCcccccCCCChH
Q psy237 90 FGNYLVDVDGNHILDVYTQISSVPLGYNHP 119 (236)
Q Consensus 90 ~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP 119 (236)
+++||.|.+|++++||-..- -..+||+-|
T Consensus 24 r~A~I~~~~G~~IvDF~~~n-LHvvgYS~P 52 (386)
T PF09940_consen 24 RDAYIKDPDGERIVDFKDNN-LHVVGYSVP 52 (386)
T ss_dssp EEEEEE-TTS-EEEETTT-G-GGB-BT---
T ss_pred eEEEEECCCCCEEEEccCCc-eeEeecccc
Confidence 57899999999999986653 366899976
No 205
>smart00497 IENR1 Intron encoded nuclease repeat motif. Repeat of unknown function, but possibly DNA-binding via helix-turn-helix motif (Ponting, unpublished).
Probab=21.82 E-value=1e+02 Score=19.49 Aligned_cols=38 Identities=26% Similarity=0.366 Sum_probs=28.7
Q ss_pred cccEEEeCCCCEEEeccCC-cccccCCCChHHHHHHhhc
Q psy237 90 FGNYLVDVDGNHILDVYTQ-ISSVPLGYNHPALLKIFDD 127 (236)
Q Consensus 90 ~G~~l~D~dG~~yLD~~~g-~~~~~lGh~hP~V~~Ai~~ 127 (236)
+..+++|.+|+.+.-|-+- -++--||-+|..|.+.+..
T Consensus 2 k~V~~~d~~~~~i~~f~S~~eAa~~lg~~~~~I~~~~~~ 40 (53)
T smart00497 2 KPVYVYDLDGNLIGEFSSIREAAKYLGISHSSISKYLNT 40 (53)
T ss_pred ccEEEEeCCCCEEEEecCHHHHHHHhCCCHHHHHHHHhC
Confidence 4678899999977655433 4566789999999988876
No 206
>PF03640 Lipoprotein_15: Secreted repeat of unknown function; InterPro: IPR005297 This repeat is found in tandem in a set of lipoproteins. The alignment contains a Y-X4-D motif.
Probab=21.02 E-value=1e+02 Score=20.14 Aligned_cols=21 Identities=19% Similarity=0.203 Sum_probs=16.9
Q ss_pred eeecccccEEEeCCCCEEEec
Q psy237 85 DYQKSFGNYLVDVDGNHILDV 105 (236)
Q Consensus 85 ~i~~a~G~~l~D~dG~~yLD~ 105 (236)
++.+..|..++|.+|..+-=|
T Consensus 3 ~v~~~dG~~~~~~~G~~LY~f 23 (48)
T PF03640_consen 3 VVTRADGTIQVDYNGMPLYYF 23 (48)
T ss_pred EEEeCCCCEEECCCCCEEEEE
Confidence 477888999999999886544
No 207
>PF03602 Cons_hypoth95: Conserved hypothetical protein 95; InterPro: IPR004398 This entry contains Ribosomal RNA small subunit methyltransferase D as well as the putative rRNA methyltransferase YlbH. They methylate the guanosine in position 966 of 16S rRNA in the assembled 30S particle [].; GO: 0008168 methyltransferase activity, 0031167 rRNA methylation; PDB: 3P9N_A 2ESR_B 2IFT_A 1WS6_A 2FPO_B 2FHP_A.
Probab=20.66 E-value=37 Score=28.32 Aligned_cols=17 Identities=18% Similarity=0.581 Sum_probs=12.8
Q ss_pred CCCCEEEeccCCccccc
Q psy237 97 VDGNHILDVYTQISSVP 113 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~ 113 (236)
.+|.++||+++|.|++.
T Consensus 41 ~~g~~vLDLFaGSGalG 57 (183)
T PF03602_consen 41 LEGARVLDLFAGSGALG 57 (183)
T ss_dssp HTT-EEEETT-TTSHHH
T ss_pred cCCCeEEEcCCccCccH
Confidence 68999999999998653
Done!