Query psy237
Match_columns 236
No_of_seqs 317 out of 2445
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 23:12:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy237.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/237hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4atq_A 4-aminobutyrate transam 99.9 2.3E-26 8E-31 216.2 4.4 151 47-204 10-169 (456)
2 4ao9_A Beta-phenylalanine amin 99.8 4.7E-22 1.6E-26 186.9 4.8 114 61-186 41-161 (454)
3 1ohv_A 4-aminobutyrate aminotr 99.8 9.1E-20 3.1E-24 170.7 6.9 136 47-186 10-145 (472)
4 4e3q_A Pyruvate transaminase; 99.8 3.4E-20 1.2E-24 175.0 1.2 112 67-186 27-146 (473)
5 3oks_A 4-aminobutyrate transam 99.8 2E-19 7E-24 166.8 4.6 131 49-186 9-140 (451)
6 4ffc_A 4-aminobutyrate aminotr 99.8 3.4E-19 1.2E-23 165.6 4.5 131 49-186 12-143 (453)
7 2yky_A Beta-transaminase; tran 99.5 5E-18 1.7E-22 159.8 0.0 114 61-186 54-174 (465)
8 3tfu_A Adenosylmethionine-8-am 99.6 8.8E-17 3E-21 149.9 1.3 120 59-186 25-153 (457)
9 3k28_A Glutamate-1-semialdehyd 99.6 2.2E-16 7.5E-21 144.6 3.2 113 62-186 5-127 (429)
10 3hmu_A Aminotransferase, class 99.6 2.6E-16 8.9E-21 147.4 1.1 115 64-186 12-134 (472)
11 4e77_A Glutamate-1-semialdehyd 99.6 1.4E-15 4.9E-20 139.0 5.8 112 63-186 6-127 (429)
12 3l44_A Glutamate-1-semialdehyd 99.6 1.7E-15 5.7E-20 138.6 5.6 114 61-186 5-129 (434)
13 3fq8_A Glutamate-1-semialdehyd 99.6 2.6E-15 8.9E-20 137.0 6.0 112 62-185 4-125 (427)
14 4a0g_A Adenosylmethionine-8-am 99.5 2E-16 7E-21 158.2 -2.0 98 82-186 356-460 (831)
15 3i5t_A Aminotransferase; pyrid 99.5 1.4E-15 4.6E-20 142.5 1.0 98 81-186 35-132 (476)
16 3n5m_A Adenosylmethionine-8-am 99.5 2.7E-15 9.1E-20 138.3 2.0 117 62-188 7-127 (452)
17 2oat_A Ornithine aminotransfer 99.5 8E-15 2.7E-19 135.5 4.3 116 60-186 36-151 (439)
18 3dod_A Adenosylmethionine-8-am 99.5 4.6E-15 1.6E-19 136.9 1.3 113 66-186 4-122 (448)
19 2epj_A Glutamate-1-semialdehyd 99.5 2.8E-14 9.6E-19 130.6 5.6 115 60-186 8-130 (434)
20 4a6r_A Omega transaminase; tra 99.5 5.5E-15 1.9E-19 136.9 0.2 98 81-186 31-129 (459)
21 1z7d_A Ornithine aminotransfer 99.4 4E-14 1.4E-18 130.5 3.8 113 63-186 28-140 (433)
22 2e7u_A Glutamate-1-semialdehyd 99.4 2.4E-13 8.2E-18 124.0 5.7 113 62-186 4-126 (424)
23 3gju_A Putative aminotransfera 99.4 1.4E-13 4.6E-18 127.6 3.1 98 81-186 32-130 (460)
24 3dxv_A Alpha-amino-epsilon-cap 99.4 1.3E-13 4.4E-18 126.2 2.3 115 64-186 6-122 (439)
25 2cy8_A D-phgat, D-phenylglycin 99.4 6.4E-13 2.2E-17 122.3 6.8 114 61-186 11-131 (453)
26 2pb2_A Acetylornithine/succiny 99.3 5E-13 1.7E-17 122.4 3.2 114 62-186 19-132 (420)
27 2cjg_A L-lysine-epsilon aminot 99.3 2.2E-13 7.4E-18 126.1 0.2 112 65-186 18-137 (449)
28 3nx3_A Acoat, acetylornithine 99.3 1.1E-12 3.6E-17 118.2 3.0 104 72-186 8-111 (395)
29 1zod_A DGD, 2,2-dialkylglycine 99.3 7.3E-13 2.5E-17 120.8 1.1 115 63-186 5-120 (433)
30 3i4j_A Aminotransferase, class 99.2 7.6E-13 2.6E-17 120.8 0.2 99 80-186 9-107 (430)
31 3ruy_A Ornithine aminotransfer 99.2 1.7E-12 5.8E-17 116.5 1.6 109 67-186 3-111 (392)
32 2eo5_A 419AA long hypothetical 99.2 4.6E-12 1.6E-16 115.7 4.0 115 64-186 3-122 (419)
33 4adb_A Succinylornithine trans 99.1 6.3E-11 2.2E-15 106.4 4.3 105 71-186 10-114 (406)
34 3a8u_X Omega-amino acid--pyruv 99.1 2.3E-11 7.7E-16 111.7 0.9 96 82-186 32-128 (449)
35 1sff_A 4-aminobutyrate aminotr 99.0 4.2E-11 1.4E-15 108.4 2.0 116 63-186 3-120 (426)
36 1s0a_A Adenosylmethionine-8-am 99.0 9.2E-11 3.1E-15 106.8 3.0 98 81-186 23-121 (429)
37 4atq_A 4-aminobutyrate transam 98.9 1.9E-10 6.4E-15 107.9 2.0 57 170-226 51-109 (456)
38 4ao9_A Beta-phenylalanine amin 98.8 2.5E-09 8.4E-14 100.4 4.0 48 162-211 68-115 (454)
39 1vef_A Acetylornithine/acetyl- 98.8 2.7E-09 9.3E-14 95.6 3.3 111 66-185 8-121 (395)
40 4e3q_A Pyruvate transaminase; 98.7 2.2E-09 7.6E-14 101.1 2.3 52 164-217 50-103 (473)
41 2ord_A Acoat, acetylornithine 98.7 3.1E-09 1.1E-13 95.4 3.1 98 78-186 18-115 (397)
42 2w8t_A SPT, serine palmitoyltr 98.6 6.2E-08 2.1E-12 88.3 6.6 67 62-132 25-94 (427)
43 2eh6_A Acoat, acetylornithine 98.4 1.9E-07 6.7E-12 82.6 3.8 97 79-185 7-103 (375)
44 3oks_A 4-aminobutyrate transam 98.3 1.5E-07 5.1E-12 86.8 2.7 50 169-218 47-98 (451)
45 3tfu_A Adenosylmethionine-8-am 98.3 1.3E-07 4.5E-12 87.7 1.4 49 169-217 58-111 (457)
46 4ffc_A 4-aminobutyrate aminotr 98.3 1.6E-07 5.5E-12 86.8 2.0 50 169-218 50-101 (453)
47 3tqx_A 2-amino-3-ketobutyrate 98.2 1.9E-06 6.3E-11 76.6 7.7 50 80-133 24-74 (399)
48 1ohv_A 4-aminobutyrate aminotr 98.2 4E-07 1.4E-11 84.8 1.8 44 169-212 49-92 (472)
49 2yky_A Beta-transaminase; tran 97.5 2.2E-07 7.5E-12 87.2 0.0 43 170-212 87-129 (465)
50 3i5t_A Aminotransferase; pyrid 98.2 4.4E-07 1.5E-11 84.6 1.9 48 170-217 41-90 (476)
51 1fc4_A 2-amino-3-ketobutyrate 98.1 1.8E-06 6.2E-11 77.1 5.1 51 79-132 24-75 (401)
52 3hmu_A Aminotransferase, class 98.1 7.9E-07 2.7E-11 82.9 2.7 42 170-211 42-83 (472)
53 3dod_A Adenosylmethionine-8-am 98.1 6.4E-07 2.2E-11 82.2 1.4 47 170-216 31-79 (448)
54 4e77_A Glutamate-1-semialdehyd 98.1 1.4E-06 4.8E-11 79.2 3.3 41 170-210 40-80 (429)
55 4a0g_A Adenosylmethionine-8-am 98.1 2.6E-07 8.9E-12 92.5 -1.8 58 170-227 361-427 (831)
56 3k28_A Glutamate-1-semialdehyd 98.0 1.7E-06 5.9E-11 78.7 3.2 42 170-211 40-81 (429)
57 3n5m_A Adenosylmethionine-8-am 98.0 1.2E-06 4.2E-11 80.2 2.2 46 170-215 36-83 (452)
58 3l44_A Glutamate-1-semialdehyd 98.0 2.2E-06 7.5E-11 77.8 3.1 42 170-211 42-83 (434)
59 3fq8_A Glutamate-1-semialdehyd 98.0 3.2E-06 1.1E-10 76.6 3.7 41 170-210 39-79 (427)
60 2oat_A Ornithine aminotransfer 98.0 3.9E-06 1.3E-10 77.1 3.9 47 170-216 63-111 (439)
61 4a6r_A Omega transaminase; tra 97.9 2.4E-06 8.2E-11 78.7 1.7 42 170-211 37-78 (459)
62 1z7d_A Ornithine aminotransfer 97.9 5.1E-06 1.7E-10 76.1 3.4 47 170-216 52-100 (433)
63 3nx3_A Acoat, acetylornithine 97.8 4.6E-06 1.6E-10 74.5 2.0 48 170-217 23-72 (395)
64 2pb2_A Acetylornithine/succiny 97.8 5.4E-06 1.8E-10 75.4 2.4 47 170-216 44-92 (420)
65 3gju_A Putative aminotransfera 97.8 6.2E-06 2.1E-10 75.9 2.2 42 170-211 38-79 (460)
66 1bs0_A Protein (8-amino-7-oxon 97.8 3E-05 1E-09 68.7 6.4 59 70-132 10-69 (384)
67 3ruy_A Ornithine aminotransfer 97.7 1.3E-05 4.6E-10 71.3 3.5 56 153-210 8-63 (392)
68 3a2b_A Serine palmitoyltransfe 97.7 2.3E-05 8E-10 69.8 3.9 95 81-186 25-121 (398)
69 2cjg_A L-lysine-epsilon aminot 97.6 9.3E-06 3.2E-10 74.7 0.7 48 163-210 33-83 (449)
70 2e7u_A Glutamate-1-semialdehyd 97.6 3.3E-05 1.1E-09 69.9 3.2 41 170-210 39-79 (424)
71 3i4j_A Aminotransferase, class 97.5 1.9E-05 6.4E-10 71.6 1.1 41 170-210 16-56 (430)
72 4adb_A Succinylornithine trans 97.5 3.6E-05 1.2E-09 68.6 3.0 57 152-210 10-66 (406)
73 3dxv_A Alpha-amino-epsilon-cap 97.5 4.4E-05 1.5E-09 69.3 3.1 41 170-210 30-70 (439)
74 3l8a_A METC, putative aminotra 97.5 1.2E-05 3.9E-10 72.9 -1.1 95 82-186 41-137 (421)
75 2epj_A Glutamate-1-semialdehyd 97.5 5E-05 1.7E-09 68.9 3.1 41 170-210 43-83 (434)
76 2cy8_A D-phgat, D-phenylglycin 97.3 0.00012 4E-09 66.9 3.3 42 169-210 43-84 (453)
77 2eo5_A 419AA long hypothetical 97.3 0.00019 6.6E-09 64.9 4.5 41 170-210 29-70 (419)
78 3fdb_A Beta C-S lyase, putativ 97.3 4.5E-05 1.5E-09 67.1 0.2 93 84-186 7-99 (377)
79 3dzz_A Putative pyridoxal 5'-p 97.2 6.1E-05 2.1E-09 66.5 0.9 92 83-185 10-102 (391)
80 1zod_A DGD, 2,2-dialkylglycine 97.2 0.00011 3.9E-09 66.3 2.0 41 170-210 30-70 (433)
81 3a8u_X Omega-amino acid--pyruv 97.1 0.00016 5.5E-09 65.8 2.2 42 170-211 37-78 (449)
82 1s0a_A Adenosylmethionine-8-am 96.9 0.00046 1.6E-08 62.3 3.0 41 170-210 30-70 (429)
83 3kki_A CAI-1 autoinducer synth 96.8 0.00042 1.5E-08 62.0 2.1 44 86-132 45-89 (409)
84 3b1d_A Betac-S lyase; HET: PLP 95.8 0.00023 7.8E-09 63.4 0.0 45 84-131 13-59 (392)
85 3kax_A Aminotransferase, class 96.7 0.001 3.4E-08 58.4 4.0 91 84-185 7-99 (383)
86 1sff_A 4-aminobutyrate aminotr 96.7 0.00082 2.8E-08 60.2 3.2 41 170-210 28-68 (426)
87 2ord_A Acoat, acetylornithine 96.4 0.001 3.5E-08 59.2 2.2 41 170-210 27-67 (397)
88 1vef_A Acetylornithine/acetyl- 96.4 0.0014 4.8E-08 58.1 3.1 41 170-210 32-72 (395)
89 1d2f_A MALY protein; aminotran 96.3 0.0018 6.3E-08 57.3 3.2 63 86-156 9-77 (390)
90 2eh6_A Acoat, acetylornithine 95.6 0.0045 1.5E-07 54.2 2.4 41 170-210 15-55 (375)
91 1c7n_A Cystalysin; transferase 95.6 0.00072 2.5E-08 60.0 -2.9 64 85-156 9-79 (399)
92 3fkd_A L-threonine-O-3-phospha 95.6 0.0052 1.8E-07 53.4 2.7 108 86-210 1-108 (350)
93 4dq6_A Putative pyridoxal phos 95.6 0.0011 3.6E-08 58.4 -1.9 92 84-186 11-108 (391)
94 3ftb_A Histidinol-phosphate am 92.5 0.028 9.6E-07 48.7 0.6 86 83-184 8-94 (361)
95 1fc4_A 2-amino-3-ketobutyrate 92.2 0.091 3.1E-06 46.3 3.5 38 170-210 32-70 (401)
96 3tqx_A 2-amino-3-ketobutyrate 91.1 0.13 4.4E-06 45.0 3.3 37 170-210 31-68 (399)
97 3ly1_A Putative histidinol-pho 90.1 0.05 1.7E-06 47.0 -0.3 41 88-131 4-44 (354)
98 3jtx_A Aminotransferase; NP_28 90.1 0.035 1.2E-06 48.8 -1.3 48 82-132 12-59 (396)
99 2w8t_A SPT, serine palmitoyltr 89.1 0.14 4.9E-06 45.9 1.9 36 171-210 53-89 (427)
100 1lc5_A COBD, L-threonine-O-3-p 88.7 0.15 5.1E-06 44.4 1.7 34 95-131 19-52 (364)
101 2zc0_A Alanine glyoxylate tran 88.1 0.26 8.9E-06 43.3 2.9 55 99-156 33-88 (407)
102 2bwn_A 5-aminolevulinate synth 85.3 0.49 1.7E-05 41.5 3.1 33 98-132 44-76 (401)
103 3nra_A Aspartate aminotransfer 82.2 0.16 5.3E-06 44.6 -1.5 47 84-132 20-69 (407)
104 3fdb_A Beta C-S lyase, putativ 74.6 0.51 1.7E-05 40.8 -0.6 38 170-210 10-47 (377)
105 3ezs_A Aminotransferase ASPB; 73.6 1.8 6.1E-05 37.3 2.7 79 97-186 21-100 (376)
106 1bs0_A Protein (8-amino-7-oxon 73.5 1.5 5.3E-05 37.9 2.3 37 170-210 27-64 (384)
107 3l8a_A METC, putative aminotra 71.6 0.82 2.8E-05 40.6 0.0 38 170-210 46-85 (421)
108 3dzz_A Putative pyridoxal 5'-p 71.3 0.87 3E-05 39.4 0.2 38 170-210 14-51 (391)
109 2oqx_A Tryptophanase; lyase, p 70.9 0.71 2.4E-05 41.4 -0.5 67 99-186 40-107 (467)
110 3lvm_A Cysteine desulfurase; s 67.8 1.2 4.1E-05 39.1 0.3 28 97-130 20-47 (423)
111 2zyj_A Alpha-aminodipate amino 66.6 2.2 7.5E-05 37.3 1.7 33 99-132 31-63 (397)
112 2x5d_A Probable aminotransfera 64.7 3.9 0.00013 35.9 3.0 33 97-132 34-66 (412)
113 2q7w_A Aspartate aminotransfer 63.9 4.5 0.00016 35.0 3.3 62 92-156 18-82 (396)
114 2z61_A Probable aspartate amin 61.9 4 0.00014 35.1 2.5 80 98-186 27-107 (370)
115 1vp4_A Aminotransferase, putat 60.5 3.5 0.00012 36.5 1.9 32 99-131 42-73 (425)
116 3b1d_A Betac-S lyase; HET: PLP 64.1 1.9 6.5E-05 37.7 0.0 39 170-211 16-56 (392)
117 1v72_A Aldolase; PLP-dependent 58.4 3.1 0.00011 35.3 1.1 28 99-130 6-33 (356)
118 3g0t_A Putative aminotransfera 57.4 1.5 5.1E-05 38.7 -1.1 47 82-131 26-72 (437)
119 1d2f_A MALY protein; aminotran 56.5 3.4 0.00012 35.8 1.1 38 170-210 10-52 (390)
120 3kki_A CAI-1 autoinducer synth 55.5 3.3 0.00011 36.3 0.9 37 171-210 47-84 (409)
121 3a2b_A Serine palmitoyltransfe 55.5 4 0.00014 35.5 1.3 37 170-210 31-68 (398)
122 2gb3_A Aspartate aminotransfer 51.5 8.6 0.00029 33.6 2.9 81 97-187 40-121 (409)
123 2ay1_A Aroat, aromatic amino a 50.2 9.2 0.00031 33.0 2.9 34 98-131 24-59 (394)
124 2dou_A Probable N-succinyldiam 49.1 8 0.00028 33.2 2.3 32 97-131 22-53 (376)
125 1ax4_A Tryptophanase; tryptoph 48.0 1.5 5.1E-05 39.3 -2.7 26 98-130 41-66 (467)
126 3h14_A Aminotransferase, class 47.9 7.3 0.00025 33.7 1.8 80 97-185 28-108 (391)
127 3qgu_A LL-diaminopimelate amin 44.7 15 0.0005 32.5 3.4 41 90-133 59-99 (449)
128 3kax_A Aminotransferase, class 44.7 7.5 0.00026 33.2 1.4 38 170-210 10-48 (383)
129 1xi9_A Putative transaminase; 44.6 12 0.00039 32.7 2.6 35 97-132 35-70 (406)
130 3ele_A Amino transferase; RER0 42.2 4.8 0.00016 34.9 -0.3 31 99-132 34-64 (398)
131 3b46_A Aminotransferase BNA3; 42.2 13 0.00043 33.2 2.5 81 98-186 55-136 (447)
132 3dyd_A Tyrosine aminotransfera 42.1 6.4 0.00022 34.9 0.5 84 95-184 49-134 (427)
133 3get_A Histidinol-phosphate am 41.7 18 0.0006 30.8 3.3 69 100-184 30-98 (365)
134 3hdo_A Histidinol-phosphate am 41.1 15 0.00051 31.3 2.7 78 97-186 23-100 (360)
135 3ffh_A Histidinol-phosphate am 41.0 9.8 0.00033 32.4 1.5 71 99-185 31-101 (363)
136 3fkd_A L-threonine-O-3-phospha 37.0 9.9 0.00034 32.3 0.9 39 171-212 3-41 (350)
137 3piu_A 1-aminocyclopropane-1-c 36.6 12 0.0004 33.1 1.3 39 94-134 30-68 (435)
138 1gff_3 Bacteriophage G4 capsid 36.5 15 0.00051 19.9 1.2 16 87-102 10-25 (26)
139 3ei9_A LL-diaminopimelate amin 33.9 25 0.00087 30.7 3.1 38 93-133 49-86 (432)
140 2o1b_A Aminotransferase, class 33.7 18 0.00062 31.6 2.1 32 97-131 44-75 (404)
141 1c7n_A Cystalysin; transferase 32.5 5.4 0.00019 34.6 -1.6 38 170-210 11-55 (399)
142 3gbx_A Serine hydroxymethyltra 30.5 3.8 0.00013 35.7 -3.0 27 103-131 30-56 (420)
143 1j32_A Aspartate aminotransfer 30.5 20 0.00069 30.7 1.8 31 98-131 28-58 (388)
144 3ke3_A Putative serine-pyruvat 30.0 16 0.00055 31.6 1.1 38 93-130 5-42 (379)
145 1o4s_A Aspartate aminotransfer 30.0 22 0.00076 30.7 2.0 31 98-131 39-69 (389)
146 1yiz_A Kynurenine aminotransfe 28.5 35 0.0012 29.7 3.1 28 101-131 38-65 (429)
147 4dq6_A Putative pyridoxal phos 27.6 9.3 0.00032 32.7 -0.9 38 170-210 14-56 (391)
148 1v2d_A Glutamine aminotransfer 26.1 26 0.00088 30.0 1.7 27 102-131 27-53 (381)
149 2v2f_A Penicillin binding prot 25.6 43 0.0015 17.8 2.0 17 89-105 4-20 (26)
150 1svv_A Threonine aldolase; str 25.3 27 0.00091 29.2 1.6 69 102-185 15-83 (359)
151 1ajs_A Aspartate aminotransfer 24.8 51 0.0017 28.4 3.4 32 98-129 28-61 (412)
152 3aow_A Putative uncharacterize 24.4 26 0.00088 31.3 1.4 32 99-131 75-106 (448)
153 1uu1_A Histidinol-phosphate am 24.1 47 0.0016 27.8 3.0 96 100-209 19-114 (335)
154 1m06_J J protein, small core p 22.3 13 0.00045 20.2 -0.6 17 87-103 9-25 (26)
155 4eb5_A Probable cysteine desul 22.1 12 0.00041 31.8 -1.2 25 101-131 2-26 (382)
156 3cq5_A Histidinol-phosphate am 22.1 57 0.0019 27.7 3.1 49 103-155 33-81 (369)
157 1q87_A 39 kDa initiator bindin 21.7 31 0.0011 28.7 1.2 17 86-102 174-190 (221)
158 3euc_A Histidinol-phosphate am 21.4 38 0.0013 28.7 1.8 30 99-131 29-58 (367)
No 1
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.92 E-value=2.3e-26 Score=216.20 Aligned_cols=151 Identities=17% Similarity=0.162 Sum_probs=118.4
Q ss_pred CCCCCCCcccccCCChhHHHHHHHHhccccC-CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHh
Q psy237 47 LSEPSHPQLVTEVPGPQTKALKQKLSQLQQS-GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIF 125 (236)
Q Consensus 47 ~~~~~~~~v~~~~pgp~s~~l~~~~~~~~~~-~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai 125 (236)
..++..+++.+.+|||+|++|++++++++++ ...++|++++||+|+||||+|||+||||++|+|+++|||+||+|++|+
T Consensus 10 ~~~~~~~~i~t~iPGP~s~~l~~r~~~~~~~~~~~~~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai 89 (456)
T 4atq_A 10 YRIEQKRNINGAFPGPKSQALAERRSAVVAAGVASGVPVYVEDADGGIIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAV 89 (456)
T ss_dssp CSSCCSCBCCSSSSCHHHHHHHHHHHHHBCTTCCCSCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHH
T ss_pred ccCCCCCeecCCCCChHHHHHHHHHHHhCCCCCCCCCCCeEEeeecCEEEeCCCCEEEEccccHHHHhcCCCCHHHHHHH
Confidence 3456778899999999999999999999876 456789999999999999999999999999999999999999999999
Q ss_pred hccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh--------hhhcccccccc
Q psy237 126 DDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL--------DVYTQISSVPL 197 (236)
Q Consensus 126 ~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l--------D~~sg~~~~~l 197 (236)
++|++++.|......++++..+++++|.+ ..|... ..+++|.++|+||+|.+++ +-+..+....|
T Consensus 90 ~~q~~~~~~~~~~~~~~~~~~~lae~L~~----~~p~~~---~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yH 162 (456)
T 4atq_A 90 QEAAAHFTHTCFMVTPYEGYVAVTEQLNR----LTPGDH---AKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYH 162 (456)
T ss_dssp HHHHHHCSCCTTTTSCCHHHHHHHHHHHH----HSSCSS---CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCC
T ss_pred HHHHhhccCcccCccCcHHHHHHHHHHHH----hCCCCC---CcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccC
Confidence 99999988765444444444455555554 466432 1257889999999999886 22233555667
Q ss_pred CCCCHHH
Q psy237 198 GYNHPAL 204 (236)
Q Consensus 198 Gh~~p~i 204 (236)
|+..-.+
T Consensus 163 G~t~~al 169 (456)
T 4atq_A 163 GRTNLTM 169 (456)
T ss_dssp CSSHHHH
T ss_pred Ccccccc
Confidence 7665433
No 2
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.84 E-value=4.7e-22 Score=186.92 Aligned_cols=114 Identities=12% Similarity=0.117 Sum_probs=94.2
Q ss_pred ChhHHHHHHHHhccccC-------CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 61 GPQTKALKQKLSQLQQS-------GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 61 gp~s~~l~~~~~~~~~~-------~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
.|+|+++++++++++++ .+.++|+++++|+|+||||+|||+||||++|+|+++|||+||+|++|+++|+++..
T Consensus 41 ~p~s~~~~~~a~~~~pgg~~~~~~~~~~~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~ 120 (454)
T 4ao9_A 41 NPASQRQFEAQARYMPGANSRSVLFYAPFPLTIARGEGAALWDADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGI 120 (454)
T ss_dssp CHHHHHHHHHHTTTSGGGCSSGGGCCSSCCCEEEEEETTEEEETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCS
T ss_pred CcHhHHHHHHHhhhCCCCCCCCccccCCCCccEEEeecCEEEECCCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCC
Confidence 47899999999999986 35678999999999999999999999999999999999999999999999999876
Q ss_pred cccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 134 FVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 134 ~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+... .+....+++++|.+ ..|+.. ++.|.++|+||++.+++
T Consensus 121 ~~~~---~~~~~~~lae~l~~----~~p~~~-----~v~f~~SGsEA~e~Aik 161 (454)
T 4ao9_A 121 NLTG---HNLLEGRLARLICE----RFPQIE-----QLRFTNSGTEANLMALT 161 (454)
T ss_dssp CCCS---EESSHHHHHHHHHH----HSTTCS-----EEEEESSHHHHHHHHHH
T ss_pred CccC---CcHHHHHHHHHHHH----hCCCCC-----EEEEeCchHHHHHHHHH
Confidence 5432 23344444554444 456543 58899999999999876
No 3
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.78 E-value=9.1e-20 Score=170.72 Aligned_cols=136 Identities=40% Similarity=0.687 Sum_probs=109.8
Q ss_pred CCCCCCCcccccCCChhHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhh
Q psy237 47 LSEPSHPQLVTEVPGPQTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFD 126 (236)
Q Consensus 47 ~~~~~~~~v~~~~pgp~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~ 126 (236)
+.++.++.+++.+|++++++++++..+++......++.++++|+|+||||+|||+||||++|+++++|||+||+|++|++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~ 89 (472)
T 1ohv_A 10 EFDYDGPLMKTEVPGPRSRELMKQLNIIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQ 89 (472)
T ss_dssp -CCCSSCBCCSCSSCHHHHHHHHHHHHHSCCTTCCCCBCGGGCBBTEEEBTTSCEEEESSHHHHTCSSCBTCHHHHHHHH
T ss_pred CCCcccccccccCCCccHHHHHHHHHhhhccccccCCceEEEEEcCEEEeCCCCEEEECCCCHhhcccCCCCHHHHHHHH
Confidence 45778888888899999999999999988776566778899999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 127 DPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 127 ~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+|+....+.+...+++.+..++++++++.|....+... + ++.++++|+||++.+++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~---~-~v~f~~sGseA~~~Aik 145 (472)
T 1ohv_A 90 QPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGM---S-QLITMACGSCSNENAFK 145 (472)
T ss_dssp CGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTC---C-EEEEESSHHHHHHHHHH
T ss_pred HHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCc---C-EEEEeCCchhHHHHHHH
Confidence 99876433333234455567888888876655554221 2 58899999999998775
No 4
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.77 E-value=3.4e-20 Score=175.03 Aligned_cols=112 Identities=15% Similarity=0.081 Sum_probs=85.9
Q ss_pred HHHHHhccccCCc-------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-
Q psy237 67 LKQKLSQLQQSGS-------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP- 138 (236)
Q Consensus 67 l~~~~~~~~~~~~-------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~- 138 (236)
+.++.+++....+ ...|++|+||+|+||||+|||+||||++|+|++++||+||+|++|+++|++++.+.+..
T Consensus 27 ~~~~~~~~~~h~~t~~~~~~~~~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~ 106 (473)
T 4e3q_A 27 WEARAETYSLYGFTDMPSLHQRGTVVVTHGEGPYIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFF 106 (473)
T ss_dssp HHHHHHHHBCCSSCCHHHHHHHCCEEEEEEETTEEEETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCT
T ss_pred HHHHHhhhcCCCCCChhhhccCCCEEEEeeecCEEEeCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccc
Confidence 5566666654322 23489999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 139 ALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 139 ~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
...+++..+++++|.+ ..|... + +++|.++|+||+|.+++
T Consensus 107 ~~~~~~~~~lAe~L~~----~~p~~~---~-~v~f~~sGsEA~e~AiK 146 (473)
T 4e3q_A 107 GRMSDQTVMLSEKLVE----VSPFDS---G-RVFYTNSGSEANDTMVK 146 (473)
T ss_dssp TEEEHHHHHHHHHHHH----HSSCSS---C-EEEEESSHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHh----hCCCCc---c-EEEEeCchHHHHHHHHH
Confidence 2234444455555554 456321 2 68999999999999886
No 5
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.76 E-value=2e-19 Score=166.81 Aligned_cols=131 Identities=18% Similarity=0.183 Sum_probs=101.3
Q ss_pred CCCCCcccccCCChhHHHHHHHHhccccCC-ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhc
Q psy237 49 EPSHPQLVTEVPGPQTKALKQKLSQLQQSG-SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 127 (236)
Q Consensus 49 ~~~~~~v~~~~pgp~s~~l~~~~~~~~~~~-~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~ 127 (236)
.+..+++.+.+|+|+|++++++.++++... ..++|+++++|+|+||||.||++||||.+++++++|||+||+|++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~ 88 (451)
T 3oks_A 9 PEQSRHLATAIPGPRSQALIDRKGTAVARGVGTTMPVYAVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRS 88 (451)
T ss_dssp CCSSCBCSSCSSCHHHHHHHHHHHHHBCTTBCCSCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHH
T ss_pred CCcccccccCCCCCcHHHHHHHHHhhccCCcCCCCCceEEEeecCEEEECCCCEEEEcCCCccccccCCCCHHHHHHHHH
Confidence 344555778899999999999999988763 4578999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 128 PATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 128 q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|++++.+.....+.++...+++++ +....+... ..++.++++|+|+++.+++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~la~~----l~~~~~~~~---~~~v~~~~sGseA~~~Alk 140 (451)
T 3oks_A 89 QVGDFTHTCFMVTPYEGYVAVCEQ----LNRLTPVRG---DKRSALFNSGSEAVENAVK 140 (451)
T ss_dssp HHTTCSCCTTTTSCCHHHHHHHHH----HHHHSSCCS---SEEEEEESSHHHHHHHHHH
T ss_pred HHHhcccccCCccCCHHHHHHHHH----HHHhCCcCC---CCEEEEeCcHHHHHHHHHH
Confidence 999876544222323233344444 444454221 1258889999999998774
No 6
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.75 E-value=3.4e-19 Score=165.57 Aligned_cols=131 Identities=23% Similarity=0.204 Sum_probs=101.6
Q ss_pred CCCCCcccccCCChhHHHHHHHHhccccC-CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhc
Q psy237 49 EPSHPQLVTEVPGPQTKALKQKLSQLQQS-GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 127 (236)
Q Consensus 49 ~~~~~~v~~~~pgp~s~~l~~~~~~~~~~-~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~ 127 (236)
.+..+++.+.+|+|+|++++++.++++.. ...++|+++++|+|+||||.|||+||||.+++++++|||+||+|++|+++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~v~d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~ 91 (453)
T 4ffc_A 12 LAQKRTIVTPLPGPRSGALAERRRAAVSAGVGSTAPVYAVDADGGVIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIAD 91 (453)
T ss_dssp SCCCCBCCSCSSCHHHHHHHHHHHHHBCTTTCCSCSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHH
T ss_pred cCCCcccccCCCCCCHHHHHHHHHHhcCCCcCCCCCceEEeeecCEEEeCCCCEEEEcCCCcccCcCCCCCHHHHHHHHH
Confidence 44556677889999999999999998876 44578999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 128 PATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 128 q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
|++++.+.....+.++...+++++ +....+... ..++.++++|+|+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~la~~----l~~~~~~~~---~~~v~~~~sGseA~~~alk 143 (453)
T 4ffc_A 92 QATHFTHTCFMVTPYEQYVQVAEL----LNALTPGDH---DKRTALFNSGAEAVENAIK 143 (453)
T ss_dssp HHHHCSCCTTTTSCCHHHHHHHHH----HHHHSSCSS---CEEEEEESSHHHHHHHHHH
T ss_pred HHHhccccccCcCCCHHHHHHHHH----HHHhCCCCC---CcEEEEeCcHHHHHHHHHH
Confidence 999876543222223233344444 444454211 1258889999999998774
No 7
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.48 E-value=5e-18 Score=159.83 Aligned_cols=114 Identities=12% Similarity=0.165 Sum_probs=93.4
Q ss_pred ChhHHHHHHHHhccccCC-------ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 61 GPQTKALKQKLSQLQQSG-------SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 61 gp~s~~l~~~~~~~~~~~-------~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
.++|+++++++++++++. +.++|+++++|+|+||||+|||+||||++|+++++|||+||+|++|+++|+++..
T Consensus 54 ~~~s~~l~~~~~~~~~~g~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~~~~~ 133 (465)
T 2yky_A 54 NPVSAGHHERARRSMPGGNTRSILFHRPFPLVIAQGTGSRFQDVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERALAVGL 133 (465)
Confidence 467889999999998851 3457999999999999999999999999999999999999999999999998853
Q ss_pred cccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 134 FVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 134 ~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.. .+.++...+++++|.+ ..|+.+ ++.++++|+|+++.+++
T Consensus 134 ~~---~~~~~~~~~Lae~L~~----~~p~~~-----~v~~~nSGseA~~~Aik 174 (465)
T 2yky_A 134 NL---STQTENEALFAEAVCD----RFPSID-----LVRFTNSGTEANLMALA 174 (465)
Confidence 21 3456677777777776 233322 47889999999998764
No 8
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.60 E-value=8.8e-17 Score=149.86 Aligned_cols=120 Identities=18% Similarity=0.097 Sum_probs=88.6
Q ss_pred CCChhHHHHHHHHhccccCCccc------cceeeecccccEEEeC-CCC--EEEeccCCcccccCCCChHHHHHHhhccc
Q psy237 59 VPGPQTKALKQKLSQLQQSGSVS------LFVDYQKSFGNYLVDV-DGN--HILDVYTQISSVPLGYNHPALLKIFDDPA 129 (236)
Q Consensus 59 ~pgp~s~~l~~~~~~~~~~~~~~------~p~~i~~a~G~~l~D~-dG~--~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~ 129 (236)
.++..+++++++.++++...+.. .|+++++|+|+||||. ||| +||||.+|+++++|||+||+|++|+++|+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~d~~dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~ 104 (457)
T 3tfu_A 25 TGGLTPEQIIAVDGAHLWHPYSSIGREAVSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQL 104 (457)
T ss_dssp --CCCHHHHHHHHHHHBCCTTCCSSCCSSCCEEEEEEEBTEEEEEETTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHhhcCcccccccccCCCCceEEeeecCEEEEccCCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHH
Confidence 34455677888887776554433 3899999999999999 999 99999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 130 TVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 130 ~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+++.+.....+.++...+++++ +...++... + ++.++++|+|+++.+++
T Consensus 105 ~~~~~~~~~~~~~~~~~~L~e~----la~~~~~~~---~-~v~~~~sGseA~~~Alk 153 (457)
T 3tfu_A 105 RVMNHVMFGGLTHEPAARLAKL----LVDITPAGL---D-TVFFSDSGSVSVEVAAK 153 (457)
T ss_dssp HHCSCCCSSSEECHHHHHHHHH----HHHHSSTTE---E-EEEEESSHHHHHHHHHH
T ss_pred HhccCccccccCCHHHHHHHHH----HHHhCCCCc---C-EEEEeCcHHHHHHHHHH
Confidence 9876644222333333344444 444455221 2 58899999999998665
No 9
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.60 E-value=2.2e-16 Score=144.64 Aligned_cols=113 Identities=13% Similarity=0.077 Sum_probs=88.5
Q ss_pred hhHHHHHHHHhccccCC-------c---cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 62 PQTKALKQKLSQLQQSG-------S---VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~-------~---~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
|+|+++++++++++++. + .++|+++++|+|++|||.|||+||||.+++++++|||+||+|++|+++|+++
T Consensus 5 ~~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~ 84 (429)
T 3k28_A 5 DKSIAAFEEAQDLMPGGVNSPVRAFKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAER 84 (429)
T ss_dssp HHHHHHHHHHTTTSGGGSSSGGGGCGGGTCCCCCEEEEEBTEEEETTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhcCCCcCcccccccccCCCCceEEEeecCEEEECCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhh
Confidence 68999999999998862 1 3578999999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+.+. .+.++...++++++.+ ..++.+ ++.++++|+|+++.+++
T Consensus 85 ~~~~---~~~~~~~~~l~~~la~----~~~~~~-----~v~~~~~Gsea~~~ai~ 127 (429)
T 3k28_A 85 GTSF---GAPTEIENKLAKLVIE----RVPSIE-----IVRMVNSGTEATMSALR 127 (429)
T ss_dssp CSCC---SSCCHHHHHHHHHHHH----HSTTCS-----EEEEESSHHHHHHHHHH
T ss_pred CcCc---CCCCHHHHHHHHHHHH----hCCCCC-----EEEEeCChHHHHHHHHH
Confidence 5431 2333333344444444 444322 47889999999987664
No 10
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.57 E-value=2.6e-16 Score=147.37 Aligned_cols=115 Identities=17% Similarity=0.137 Sum_probs=83.7
Q ss_pred HHHHHHHHhccccC-Cc------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccccccc
Q psy237 64 TKALKQKLSQLQQS-GS------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVN 136 (236)
Q Consensus 64 s~~l~~~~~~~~~~-~~------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~ 136 (236)
++++.++.++++.. +. ...|+++++|+|+||||.|||+||||.+|+++++|||+||+|++|+++|++++.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~ 91 (472)
T 3hmu_A 12 TAELQALDAAHHLHPFSANNALGEEGTRVITRARGVWLNDSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYN 91 (472)
T ss_dssp HHHHHHHHHHHEECTTEEHHHHHHHCCEEEEEEEBTEEEETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCC
T ss_pred HHHHHHHHHhhccCCcccccccccCCCeeEEEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccc
Confidence 45566666666443 21 236899999999999999999999999999999999999999999999999876322
Q ss_pred C-CCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 137 R-PALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 137 ~-~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
. ..+.++...+++++|.+ ..|... + ++.++++|+|+++.+++
T Consensus 92 ~~~~~~~~~~~~lae~l~~----~~~~~~---~-~v~~~~sGseA~~~aik 134 (472)
T 3hmu_A 92 TFFKTTHVPAIALAQKLAE----LAPGDL---N-HVFFAGGGSEANDTNIR 134 (472)
T ss_dssp SSSSEECHHHHHHHHHHHH----HSCTTE---E-EEEEESSHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHHH----hCCCCC---C-EEEEeCCHHHHHHHHHH
Confidence 1 12223333344444444 455321 2 58899999999998765
No 11
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.57 E-value=1.4e-15 Score=139.01 Aligned_cols=112 Identities=18% Similarity=0.180 Sum_probs=87.3
Q ss_pred hHHHHHHHHhccccCCc----------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 63 QTKALKQKLSQLQQSGS----------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~----------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
+|++++++.++++++.. .++|+++++|+|++|||.||++||||.+++++++|||+||+|++|+++|+++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~ 85 (429)
T 4e77_A 6 KSENLYAQAQQLIPGGVNSPVRAFTGVGGIPLFIERADGAYLFDVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERG 85 (429)
T ss_dssp HHHHHHHHHHHHSGGGCSSGGGGTTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHhhcCCCcCcccccccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhC
Confidence 68899999999987621 23689999999999999999999999999999999999999999999999876
Q ss_pred ccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 133 TFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 133 ~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+. .+.++ ....+++.+....++.. ++.++++|+|+++.+++
T Consensus 86 ~~~---~~~~~----~~~~la~~l~~~~~~~~-----~v~~~~sGsea~~~al~ 127 (429)
T 4e77_A 86 LSF---GAPTE----MEVKMAQLVTDLVPTMD-----MVRMVNSGTEATMSAIR 127 (429)
T ss_dssp SCC---SSCCH----HHHHHHHHHHHHSTTCS-----EEEEESSHHHHHHHHHH
T ss_pred ccc---CCCCH----HHHHHHHHHHhhCCCCC-----EEEEeCcHHHHHHHHHH
Confidence 432 22232 33344443444455322 57889999999998776
No 12
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.56 E-value=1.7e-15 Score=138.58 Aligned_cols=114 Identities=18% Similarity=0.210 Sum_probs=88.2
Q ss_pred ChhHHHHHHHHhccccCCc-----------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccc
Q psy237 61 GPQTKALKQKLSQLQQSGS-----------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 129 (236)
Q Consensus 61 gp~s~~l~~~~~~~~~~~~-----------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~ 129 (236)
-|+|++++++..+++++.. .++|+++++|+|+++||.|||+||||.+++++++|||+||+|++|+++|+
T Consensus 5 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~ 84 (434)
T 3l44_A 5 FTKSEALHKEALEHIVGGVNSPSRSFKAVGGGAPIAMERGKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAA 84 (434)
T ss_dssp CHHHHHHHHHHHHHBGGGCSSGGGSSGGGTCSCCCCEEEEEBTEEEETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHhhCCCCcCccccccccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHH
Confidence 3789999999999988621 15789999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 130 TVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 130 ~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++... ..+.++...++++++. ...++.. ++.++++|+|+++.+++
T Consensus 85 ~~~~~---~~~~~~~~~~l~~~la----~~~~~~~-----~v~~~~sGsea~~~ai~ 129 (434)
T 3l44_A 85 ENGVL---YGTPTALEVKFAKMLK----EAMPALD-----KVRFVNSGTEAVMTTIR 129 (434)
T ss_dssp HHCSC---CSSCCHHHHHHHHHHH----HHCTTCS-----EEEEESSHHHHHHHHHH
T ss_pred HhCcC---CCCCCHHHHHHHHHHH----HhCCCCC-----EEEEeCchHHHHHHHHH
Confidence 87432 1222333334444444 3444322 47889999999988664
No 13
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.55 E-value=2.6e-15 Score=137.03 Aligned_cols=112 Identities=15% Similarity=0.158 Sum_probs=88.3
Q ss_pred hhHHHHHHHHhccccCCc----------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 62 PQTKALKQKLSQLQQSGS----------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~~----------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++|+++++++++++++.. .++|+++++|+|++|||.||++||||.+|++++++||+||+|++|+++|+++
T Consensus 4 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 83 (427)
T 3fq8_A 4 IKSDEIFAAAQKLMPGGVSSPVRAFKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEK 83 (427)
T ss_dssp HHHHHHHHHHTTTSGGGSSSGGGGCTTTTSCCCCEEEEEBTEEEETTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHhhcCCCcccccccccccCCCCceEEEeeeCEEEECCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHh
Confidence 678999999999988621 2578999999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccch
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHI 185 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~ 185 (236)
+.+.. + ..+..+.+++.+....+... ++.++++|+|+++.++
T Consensus 84 ~~~~~---~----~~~~~~~la~~l~~~~~~~~-----~v~~~~ggsea~~~al 125 (427)
T 3fq8_A 84 GTSFG---A----PCALENVLAEMVNDAVPSIE-----MVRFVNSGTEACMAVL 125 (427)
T ss_dssp CSCCS---S----CCHHHHHHHHHHHHHSTTCS-----EEEEESSHHHHHHHHH
T ss_pred CCCcC---C----CCHHHHHHHHHHHHhCCCCC-----EEEEeCCHHHHHHHHH
Confidence 65421 1 22334444444444454322 4788999999998877
No 14
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.55 E-value=2e-16 Score=158.18 Aligned_cols=98 Identities=12% Similarity=-0.015 Sum_probs=80.7
Q ss_pred cceeeecccc--cEEEeCCCC----EEEeccCCcccccCCCC-hHHHHHHhhccccccccccCCCCCCCCCCChhhhhHh
Q psy237 82 LFVDYQKSFG--NYLVDVDGN----HILDVYTQISSVPLGYN-HPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLEN 154 (236)
Q Consensus 82 ~p~~i~~a~G--~~l~D~dG~----~yLD~~~g~~~~~lGh~-hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae 154 (236)
.|++|++|+| +||||.||| +|||+++|+|++++||+ ||+|++|+++|++++.|+....+.+++..+++++|.+
T Consensus 356 ~p~~i~~a~G~g~~l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~ 435 (831)
T 4a0g_A 356 TVTVIDSRCGENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLD 435 (831)
T ss_dssp GCEEEEEEETTEEEEEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHH
T ss_pred CCeEEEEeeccceEEEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHH
Confidence 4789999999 599999999 99999999999999999 9999999999999998876445556666666666665
Q ss_pred hhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 155 VLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 155 ~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..|... ..+++|.++|+||+|.+++
T Consensus 436 ----~~p~~~---l~~vff~~SGSeA~E~AlK 460 (831)
T 4a0g_A 436 ----GVGKGW---ASRVYFSDNGSTAIEIALK 460 (831)
T ss_dssp ----TTTTTT---CCEEEEESSHHHHHHHHHH
T ss_pred ----hCCCCC---CCEEEECCChhHHHHHHHH
Confidence 455321 1268999999999999876
No 15
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.52 E-value=1.4e-15 Score=142.51 Aligned_cols=98 Identities=12% Similarity=0.098 Sum_probs=76.1
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhcc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~a 160 (236)
..|+++++|+|+||||.|||+||||.+|+++++|||+||+|++|+++|++++.+.+...+.+ +..+.|++.+....
T Consensus 35 ~~p~~~~~~~G~~~~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~----~~~~~la~~l~~~~ 110 (476)
T 3i5t_A 35 SAQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPWYMAT----SPAARLAEKIATLT 110 (476)
T ss_dssp CCCCBEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBC----HHHHHHHHHHHTTS
T ss_pred CCCeeEEEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccCccCC----HHHHHHHHHHHhcC
Confidence 36899999999999999999999999999999999999999999999999876544322333 33444444444455
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+... + ++.++++|+|+++.+++
T Consensus 111 ~~~~---~-~v~~~~sGseA~~~Aik 132 (476)
T 3i5t_A 111 PGDL---N-RIFFTTGGSTAVDSALR 132 (476)
T ss_dssp STTC---C-EEEEESSHHHHHHHHHH
T ss_pred CCCc---C-EEEEeCchHHHHHHHHH
Confidence 5221 2 58899999999998765
No 16
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.51 E-value=2.7e-15 Score=138.30 Aligned_cols=117 Identities=18% Similarity=0.081 Sum_probs=87.5
Q ss_pred hhHHHHHHHHhccccC----CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccC
Q psy237 62 PQTKALKQKLSQLQQS----GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNR 137 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~----~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~ 137 (236)
.+++++.++..+++.. +..+.|+++++|+|+||||.||++||||.+|+++.+|||+||+|++|+++|++++.+ ..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~ 85 (452)
T 3n5m_A 7 KQTDELLAKDEQYVWHGMRPFSPNSTTVGAKAEGCWVEDIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY-FP 85 (452)
T ss_dssp HHHHHHHHHHHHHBCCTTSCSCGGGCCEEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC-CC
T ss_pred ccHHHHHHHhhhhccccccccccCCCceEEEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC-cc
Confidence 4567788887777554 334678999999999999999999999999999999999999999999999998765 22
Q ss_pred CCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchhhh
Q psy237 138 PALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHILDV 188 (236)
Q Consensus 138 ~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~lD~ 188 (236)
..+.++...++++++.+ ..+... + +.++++|+|+++.+++=.
T Consensus 86 ~~~~~~~~~~la~~l~~----~~~~~~---~--v~~~~ggseA~~~al~~~ 127 (452)
T 3n5m_A 86 MSQSHEPAIKLAEKLNE----WLGGEY---V--IFFSNSGSEANETAFKIA 127 (452)
T ss_dssp TTSEEHHHHHHHHHHHH----HHTSCE---E--EEEESSHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHH----hCCCCc---e--EEEeCchHHHHHHHHHHH
Confidence 22333333344444444 444322 2 788899999999876533
No 17
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.50 E-value=8e-15 Score=135.54 Aligned_cols=116 Identities=18% Similarity=0.212 Sum_probs=89.2
Q ss_pred CChhHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCC
Q psy237 60 PGPQTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPA 139 (236)
Q Consensus 60 pgp~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~ 139 (236)
+++++++++++..+++...+.++|+++++|+|++|||.||++||||.+|++++++||+||+|++|+++|++++.+.+. .
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~-~ 114 (439)
T 2oat_A 36 GPPTSDDIFEREYKYGAHNYHPLPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSR-A 114 (439)
T ss_dssp CCCCHHHHHHHHHHHBCCCCCCCSCEEEEEEBTEEEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCT-T
T ss_pred CCCCHHHHHHHHHHhcccccCCCCeeEEeeecCEEEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccC-c
Confidence 356678888888887776666789999999999999999999999999999999999999999999999988765432 2
Q ss_pred CCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 140 LGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 140 ~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+.++...++++.+.+ ..+ .+ .+.++++|+++++.++.
T Consensus 115 ~~~~~~~~l~~~la~----~~g-~~-----~v~~~~sGseA~~~al~ 151 (439)
T 2oat_A 115 FYNNVLGEYEEYITK----LFN-YH-----KVLPMNTGVEAGETACK 151 (439)
T ss_dssp SEESSHHHHHHHHHH----HHT-CS-----EEEEESSHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH----hcC-CC-----EEEEeCCHHHHHHHHHH
Confidence 333344445555544 332 22 36788889998876554
No 18
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.48 E-value=4.6e-15 Score=136.87 Aligned_cols=113 Identities=10% Similarity=0.006 Sum_probs=81.6
Q ss_pred HHHHHHhccccCCc------cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCC
Q psy237 66 ALKQKLSQLQQSGS------VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPA 139 (236)
Q Consensus 66 ~l~~~~~~~~~~~~------~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~ 139 (236)
++.++..+++.... ...|+++++|+|+||||.||++||||.+++++.++||+||+|++|+++|++++.+.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~ 83 (448)
T 3dod_A 4 DLIEKSKKHLWLPFTQMKDYDENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLLG 83 (448)
T ss_dssp HHHHHHHHHBCCTTCCHHHHHHSCCEEEEEEBTEEEETTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCSS
T ss_pred HHHHhhhhcccccccccccccCCCceEEEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccc
Confidence 35555555644211 235789999999999999999999999999999999999999999999999876543222
Q ss_pred CCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 140 LGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 140 ~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+.++...+++++ +....+... + ++.++++|+|+++.+++
T Consensus 84 ~~~~~~~~la~~----l~~~~~~~~---~-~v~~~~sGseA~~~al~ 122 (448)
T 3dod_A 84 MTNVPATQLAET----LIDISPKKL---T-RVFYSDSGAEAMEIALK 122 (448)
T ss_dssp SEEHHHHHHHHH----HHHHSCTTE---E-EEEEESSHHHHHHHHHH
T ss_pred cCCHHHHHHHHH----HHHhCCCCC---C-EEEEeCchHHHHHHHHH
Confidence 333333344444 444454221 2 57889999999998664
No 19
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.47 E-value=2.8e-14 Score=130.61 Aligned_cols=115 Identities=17% Similarity=0.182 Sum_probs=86.6
Q ss_pred CChhHHHHHHHHhccccCC-------c-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 60 PGPQTKALKQKLSQLQQSG-------S-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 60 pgp~s~~l~~~~~~~~~~~-------~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
|+|+|+++++++++++++. + .++|+++++|+|+++||.||++||||.++++++++||+||+|++|+.+|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~ 87 (434)
T 2epj_A 8 SGEKSRMLFERTKELFPGGVNSPVRAAVKPYPFYVKRGEGAYLYTVDGARIVDLVLAYGPLILGHKHPRVLEAVEEALAR 87 (434)
T ss_dssp -CHHHHHHHHHHTTTSGGGSSSGGGGGCSSSCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHT
T ss_pred CCcchHHHHHHHHhhcCCCcCcccccccCCCCeeEEeeecCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHh
Confidence 6899999999999998752 1 3458999999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+. .+.++...++++++.+ ..++.. .+.++++|+++++.++.
T Consensus 88 ~~~~---~~~~~~~~~l~~~la~----~~~~~~-----~v~~~~sgseA~~~al~ 130 (434)
T 2epj_A 88 GWLY---GAPGEAEVLLAEKILG----YVKRGG-----MIRFVNSGTEATMTAIR 130 (434)
T ss_dssp CSCC---SSCCHHHHHHHHHHHH----HHCTTC-----EEEEESSHHHHHHHHHH
T ss_pred CCCC---CCCCHHHHHHHHHHHH----hCCCCC-----EEEEeCCHHHHHHHHHH
Confidence 4321 2222223334444443 343222 47788999998887654
No 20
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.46 E-value=5.5e-15 Score=136.94 Aligned_cols=98 Identities=18% Similarity=0.124 Sum_probs=72.1
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~ 159 (236)
..|+++++|+|+||||.||++||||.+++++++|||+||+|++|+.+|++++.+.... .+.+ +..+.+++.+...
T Consensus 31 ~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~----~~~~~la~~l~~~ 106 (459)
T 4a6r_A 31 AGARVMTRGEGVYLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTH----PAVVELSSLLAEV 106 (459)
T ss_dssp ---CCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCC----HHHHHHHHHHHHH
T ss_pred cCCeeEEEeecCEEEECCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCC----HHHHHHHHHHHHh
Confidence 4688999999999999999999999999999999999999999999999886532211 2223 3334444434444
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+... + ++.++++|+|+++.+++
T Consensus 107 ~~~~~---~-~v~~~~ggseA~~~al~ 129 (459)
T 4a6r_A 107 TPAGF---D-RVFYTNSGSESVDTMIR 129 (459)
T ss_dssp SCTTC---C-EEEEESSHHHHHHHHHH
T ss_pred CCCCC---C-EEEEeCchHHHHHHHHH
Confidence 44221 2 58899999999998665
No 21
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.43 E-value=4e-14 Score=130.52 Aligned_cols=113 Identities=19% Similarity=0.197 Sum_probs=85.8
Q ss_pred hHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCC
Q psy237 63 QTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGV 142 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~ 142 (236)
++++++++..+++...+.++|+++++|+|+++||.||++||||.+|++++++||+||+|++|+++|++++.+.+. .+.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~-~~~~ 106 (433)
T 1z7d_A 28 TPEDYINNELKYGAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSR-AFFS 106 (433)
T ss_dssp CHHHHHHHHHHHBCCCCCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCT-TSEE
T ss_pred cHHHHHHHHHHhcccccCCCCceEEeeecCEEEECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccC-CcCC
Confidence 467888888887776666789999999999999999999999999999999999999999999999988665432 2222
Q ss_pred CCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 143 FPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 143 ~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+...++++++.+ ..+ .+ .+.++++|+++++.++.
T Consensus 107 ~~~~~l~~~la~----~~g-~~-----~v~~~~sGseA~~~al~ 140 (433)
T 1z7d_A 107 VPLGICERYLTN----LLG-YD-----KVLMMNTGAEANETAYK 140 (433)
T ss_dssp HHHHHHHHHHHH----HHT-CS-----EEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHHh----hcC-CC-----eEEEeCCHHHHHHHHHH
Confidence 233344444444 332 22 46788889998876553
No 22
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.38 E-value=2.4e-13 Score=124.03 Aligned_cols=113 Identities=19% Similarity=0.145 Sum_probs=84.7
Q ss_pred hhHHHHHHHHhccccCC-------ccc---cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 62 PQTKALKQKLSQLQQSG-------SVS---LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~-------~~~---~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++|+++++++++++++. +.+ .|+++++++|+++||.||++||||.+|++++++||+||+|++|+.+|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~d~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~ 83 (424)
T 2e7u_A 4 PISEAYFQEAKRHIPGGVSSPVRAFKAVGGTPPFLVRGEGAYVWDADGNRYLDYVMSWGPLILGHAHPKVLARVRETLER 83 (424)
T ss_dssp HHHHHHHHHHHHHSGGGSSSGGGGCTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHhcCCCcCCcceeccccCCCCeeEEeeecCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHh
Confidence 57899999999998752 122 48899999999999999999999999999999999999999999999987
Q ss_pred cccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 132 KTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 132 ~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+. .+. .++.+.+++.+....++.+ .+.++++|+++.+.++.
T Consensus 84 ~~~~---~~~----~~~~~~l~~~l~~~~~~~~-----~v~~~~~g~ea~~~al~ 126 (424)
T 2e7u_A 84 GLTF---GAP----SPLEVALAKKVKRAYPFVD-----LVRFVNSGTEATMSALR 126 (424)
T ss_dssp CSCC---SSC----CHHHHHHHHHHHHHCTTCC-----EEEEESSHHHHHHHHHH
T ss_pred CCCC---CCC----CHHHHHHHHHHHHhCCCCC-----EEEEeCCHHHHHHHHHH
Confidence 4321 122 2333444444444444222 46788899998886554
No 23
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.37 E-value=1.4e-13 Score=127.59 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=73.4
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhc
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~ 159 (236)
++|+++++|+|+||||.||++||||.+|+++++|||+||+|++|+++|++++.+.... .+.+ +..+.+++.+...
T Consensus 32 ~~p~~~~~~~G~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~----~~~~~la~~l~~~ 107 (460)
T 3gju_A 32 SPTRIMAGGEGVTVWDNNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGT----EASITLAKMIIDR 107 (460)
T ss_dssp SCCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCC----HHHHHHHHHHHHH
T ss_pred CCceEEEEeeccEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCC----HHHHHHHHHHHhh
Confidence 4568999999999999999999999999999999999999999999999886532221 1222 2334444434444
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+... + ++.++++|+|+++.+++
T Consensus 108 ~~~~~---~-~v~~~~gGseA~~~al~ 130 (460)
T 3gju_A 108 APKGM---S-RVYFGLSGSDANETNIK 130 (460)
T ss_dssp SCTTE---E-EEEEESSHHHHHHHHHH
T ss_pred CCCCc---C-EEEEeCchHHHHHHHHH
Confidence 43221 2 57899999999998664
No 24
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.36 E-value=1.3e-13 Score=126.21 Aligned_cols=115 Identities=15% Similarity=0.140 Sum_probs=84.9
Q ss_pred HHHHHHHHhccccC-CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCC
Q psy237 64 TKALKQKLSQLQQS-GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGV 142 (236)
Q Consensus 64 s~~l~~~~~~~~~~-~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~ 142 (236)
.++++++.++++++ ....+|+++++|+|+++||.||++||||.+++++++|||+||+|++|+.+|+++..+.......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~- 84 (439)
T 3dxv_A 6 KALYDRDGAAIGNLQKLRFFPLAISGGRGARLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGATILSAS- 84 (439)
T ss_dssp CCHHHHHHHHBCGGGCCCSSCCEEEEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSCSSSSE-
T ss_pred HHHHHHHHHHhccCccCCCCCceEEEeeeCEEEeCCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCccccccC-
Confidence 46688888888776 3345789999999999999999999999999999999999999999999999876543311122
Q ss_pred CCCCChhhhhHhhhhhccC-ceeeeeeeeeeecceEEeccccchh
Q psy237 143 FPSGDWPQLLENVLLKQSG-SVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 143 ~~~~elAE~Lae~Ll~~ap-~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+..+.+++.+....+ +.+ ..+.++++|+++++.++.
T Consensus 85 ---~~~~~~l~~~la~~~~~~~~----~~v~~~~ggsea~~~al~ 122 (439)
T 3dxv_A 85 ---NAPAVTLAERLLASFPGEGT----HKIWFGHSGSDANEAAYR 122 (439)
T ss_dssp ---EHHHHHHHHHHHHTTTCTTT----EEEEEESSHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHhCCCCCC----CEEEEeCCHHHHHHHHHH
Confidence 2334444444444443 220 146788899998877654
No 25
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.36 E-value=6.4e-13 Score=122.34 Aligned_cols=114 Identities=16% Similarity=0.093 Sum_probs=87.7
Q ss_pred ChhHHHHHHHHhccccCC-------ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 61 GPQTKALKQKLSQLQQSG-------SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 61 gp~s~~l~~~~~~~~~~~-------~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
.++|++++++.++++++. +.++|+++++|+|+++||.||++||||.+++++.++||+||+|++|+.+|+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~ 90 (453)
T 2cy8_A 11 TEGSVFWAQRARSVMPDGVTADTRAFDPHGLFISDAQGVHKTDVDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGV 90 (453)
T ss_dssp CHHHHHHHHHHHHHSCCC------CCSSCCCCEEEEEBTEEEETTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTC
T ss_pred CchhHHHHHHHHhhcCCCCCccccccCCCCceEEEeecCEEEECCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCC
Confidence 367899999999998752 3456899999999999999999999999999999999999999999999998743
Q ss_pred cccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 134 FVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 134 ~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+. .+ ..++.+.+++.+....++. + .+.++++|+++.+.++.
T Consensus 91 ~~---~~----~~~~~~~la~~l~~~~~~~----~-~v~~~~gg~eA~~~al~ 131 (453)
T 2cy8_A 91 QY---AA----SHPLEVRWAERIVAAFPSI----R-KLRFTGSGTETTLLALR 131 (453)
T ss_dssp SS---CS----SCHHHHHHHHHHHHHCTTC----S-EEEEESCHHHHHHHHHH
T ss_pred CC---CC----CCHHHHHHHHHHHhhCCCC----C-EEEEeCCHHHHHHHHHH
Confidence 21 12 2344555555444444422 2 47788899998886554
No 26
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.31 E-value=5e-13 Score=122.36 Aligned_cols=114 Identities=16% Similarity=0.128 Sum_probs=72.6
Q ss_pred hhHHHHHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCC
Q psy237 62 PQTKALKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALG 141 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~ 141 (236)
+.+.++.++..+++...+..+|+++++|+|+++||.||++||||.+|+++.++||+||+|++|+.+|+++..+.+. .+.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~-~~~ 97 (420)
T 2pb2_A 19 EQTAITRATFDEVILPVYAPADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSN-VFT 97 (420)
T ss_dssp --------------------CCSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCT-TSC
T ss_pred hhHHHHHHHHHHhhhccccCCCceEEeeecCEEEECCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccC-ccC
Confidence 3345566666777655555688999999999999999999999999999999999999999999999988655332 222
Q ss_pred CCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 142 VFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+..+.+++.+....+ .+ .+.++++|+++++.+++
T Consensus 98 ----~~~~~~l~~~la~~~g-~~-----~v~~~~ggteA~~~al~ 132 (420)
T 2pb2_A 98 ----NEPALRLGRKLIDATF-AE-----RVLFMNSGTEANETAFK 132 (420)
T ss_dssp ----CHHHHHHHHHHHHHSS-CS-----EEEEESSHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHhhCC-CC-----eEEEeCCHHHHHHHHHH
Confidence 2344445554444443 22 46788899998877654
No 27
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.30 E-value=2.2e-13 Score=126.11 Aligned_cols=112 Identities=22% Similarity=0.319 Sum_probs=81.3
Q ss_pred HHHHHHHhccccCCccccceeeecccccEEEe-CCCCEEEeccCCcccccCCCChHHHH-H-Hhhc---cccccccccCC
Q psy237 65 KALKQKLSQLQQSGSVSLFVDYQKSFGNYLVD-VDGNHILDVYTQISSVPLGYNHPALL-K-IFDD---PATVKTFVNRP 138 (236)
Q Consensus 65 ~~l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D-~dG~~yLD~~~g~~~~~lGh~hP~V~-~-Ai~~---q~~~~~~~~~~ 138 (236)
++++++..+++.....++++.+++|+|+|+|| .||++||||.+++++++|||+||+|+ + |+++ |++++.+.+ .
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~-~ 96 (449)
T 2cjg_A 18 DRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSN-S 96 (449)
T ss_dssp GGHHHHHHTTSCCCSCSSCBCTTTCBBTEEEBTTTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCT-T
T ss_pred HHHHHHHHHhhcccCCCeeEEEeeeeeCEEEECCCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCC-c
Confidence 45676767765433334555567999999999 99999999999999999999999999 9 9999 888765543 2
Q ss_pred CCCCCCCCChhhhhHhhhhhccC--ceeeeeeeeeeecceEEeccccchh
Q psy237 139 ALGVFPSGDWPQLLENVLLKQSG--SVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 139 ~~~~~~~~elAE~Lae~Ll~~ap--~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+.++...++++.+.+ ..+ ... ++.++++|+|+++.+++
T Consensus 97 ~~~~~~~~~la~~la~----~~~~~~~~-----~v~~~~~gseA~~~aik 137 (449)
T 2cjg_A 97 DVYSVAMARFVETFAR----VLGDPALP-----HLFFVEGGALAVENALK 137 (449)
T ss_dssp TCCCHHHHHHHHHHHH----HHCCTTCC-----EEEEESSHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHH----hcCCCCCC-----EEEEeCchHHHHHHHHH
Confidence 2333333444454444 333 222 58899999999998764
No 28
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.27 E-value=1.1e-12 Score=118.17 Aligned_cols=104 Identities=17% Similarity=0.127 Sum_probs=77.6
Q ss_pred hccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhh
Q psy237 72 SQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQL 151 (236)
Q Consensus 72 ~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~ 151 (236)
.+++...+.++|+++++|+|+++||.||++||||.+++++++|||+||+|++|+.+++++..+... .+. ....+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~----~~~~~~ 82 (395)
T 3nx3_A 8 QSHIIPTYKRFDIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSN-LYY----NENIAA 82 (395)
T ss_dssp CCSCBCGGGSCSCBEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCT-TSB----CHHHHH
T ss_pred hhhhhhccCCCCceEEeeeeeEEEECCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcccccc-ccC----CHHHHH
Confidence 344444556788999999999999999999999999999999999999999999999987655332 122 233444
Q ss_pred hHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 152 LENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 152 Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+++.+....+ .. .+.++++|+++++.++.
T Consensus 83 l~~~la~~~~-~~-----~v~~~~gg~ea~~~al~ 111 (395)
T 3nx3_A 83 AAKNLAKASA-LE-----RVFFTNSGTESIEGAMK 111 (395)
T ss_dssp HHHHHHHHHT-CS-----EEEEESSHHHHHHHHHH
T ss_pred HHHHHHHhcC-CC-----eEEEeCCHHHHHHHHHH
Confidence 4443443343 22 47788999999887654
No 29
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.26 E-value=7.3e-13 Score=120.79 Aligned_cols=115 Identities=15% Similarity=0.090 Sum_probs=84.8
Q ss_pred hHHHHHHHHhccccCCccc-cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCC
Q psy237 63 QTKALKQKLSQLQQSGSVS-LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALG 141 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~~~-~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~ 141 (236)
+|.+++++.++++++.... +|+++++++|+++||.||++|||+.++.++.++||+||+|++|+.+|+++..+.+ ..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~ 83 (433)
T 1zod_A 5 DDATFWRNARHHLVRYGGTFEPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLF-SEML 83 (433)
T ss_dssp TCHHHHHHHHHHCCCCSSCCCSSCCCEEEBTEEECTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCC-TTCC
T ss_pred hhHHHHHHHHHhhcccccccCCceEEEeecCEEEeCCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccc-cccC
Confidence 4677888888887764444 5889999999999999999999999999999999999999999999998765422 2222
Q ss_pred CCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 142 VFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+ ...+.+++.+...++... + .+.++++|+++++.++.
T Consensus 84 ~----~~~~~l~~~la~~~~~~~---~-~v~~~~gg~ea~~~a~~ 120 (433)
T 1zod_A 84 S----RPVVDLATRLANITPPGL---D-RALLLSTGAESNEAAIR 120 (433)
T ss_dssp C----HHHHHHHHHHHHHSCTTC---C-EEEEESCHHHHHHHHHH
T ss_pred C----HHHHHHHHHHHHhCCCCc---C-EEEEeCchHHHHHHHHH
Confidence 2 233344443444444211 2 47788899998887653
No 30
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.24 E-value=7.6e-13 Score=120.75 Aligned_cols=99 Identities=13% Similarity=0.043 Sum_probs=73.8
Q ss_pred cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 80 VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 80 ~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
...|+++++|+|+|+||.||++||||.+++++++|||+||+|++|+++|++++.+.+...+.+ +..+.+++.+...
T Consensus 9 ~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~----~~~~~l~~~la~~ 84 (430)
T 3i4j_A 9 SKPYPVAVRGEGVFLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGSQFSS----DVLEEYAGRLARF 84 (430)
T ss_dssp SSCCCEEEEEEBTEEEETTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEE----HHHHHHHHHHHHH
T ss_pred CCCCceEEeeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccccccCC----HHHHHHHHHHHHh
Confidence 456889999999999999999999999999999999999999999999998765543222222 2333444434434
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+... + .+.++++|+|+++.++.
T Consensus 85 ~~~~~---~-~v~~~~gg~ea~~~al~ 107 (430)
T 3i4j_A 85 VGLPT---F-RFWAVSGGSEATESAVK 107 (430)
T ss_dssp TTCTT---C-EEEEESSHHHHHHHHHH
T ss_pred CCCCC---C-EEEEeCcHHHHHHHHHH
Confidence 43211 2 47888999999887654
No 31
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.22 E-value=1.7e-12 Score=116.52 Aligned_cols=109 Identities=19% Similarity=0.215 Sum_probs=82.3
Q ss_pred HHHHHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCC
Q psy237 67 LKQKLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSG 146 (236)
Q Consensus 67 l~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~ 146 (236)
++++.++++...+.++|+++++|+|+++||.||++||||.+++++.++||+||+|.+|+.++++...+... .+..+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~ 81 (392)
T 3ruy_A 3 IIELTDTYGANNYHPLPIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSR-AFHSDQLG 81 (392)
T ss_dssp HHHHHHHHBCTTCCCCSCEECEEEBTEEECTTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCT-TSEETTHH
T ss_pred HHHHHHhhhhccCCCCCceEEeeeeCEEEeCCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhcccccc-ccCCHHHH
Confidence 55666677777777889999999999999999999999999999999999999999999999987655432 12233334
Q ss_pred ChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 147 DWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 147 elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
++++++++ ..+ .+ ...++++|++++..++.
T Consensus 82 ~l~~~la~----~~g-~~-----~v~~~~~gt~a~~~al~ 111 (392)
T 3ruy_A 82 PWYEKVAK----LTN-KE-----MVLPMNTGAEAVETAIK 111 (392)
T ss_dssp HHHHHHHH----HHT-CS-----EEEEESSHHHHHHHHHH
T ss_pred HHHHHHHH----hcC-CC-----EEEEeCcHHHHHHHHHH
Confidence 44444444 333 22 36777889888876654
No 32
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.21 E-value=4.6e-12 Score=115.65 Aligned_cols=115 Identities=19% Similarity=0.161 Sum_probs=82.5
Q ss_pred HHHHHHHHhcc-ccCCccc--cceeeecccccEEEeCCCCEEEeccCCcccccCCCC-hHHHHHHhhccccccccccCCC
Q psy237 64 TKALKQKLSQL-QQSGSVS--LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYN-HPALLKIFDDPATVKTFVNRPA 139 (236)
Q Consensus 64 s~~l~~~~~~~-~~~~~~~--~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~-hP~V~~Ai~~q~~~~~~~~~~~ 139 (236)
+++++++..++ +...+.. +|+++.+++|+++||.||++|||+.++.+++++||+ ||+|++|+.+++++..+.....
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~ 82 (419)
T 2eo5_A 3 SRKIIEESDIYLATSTRDPELFPLVIDHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAAND 82 (419)
T ss_dssp HHHHHHHHHHHSCCCCCSSCCCCCCEEEEEBTEEEETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSCSC
T ss_pred hHHHHHHHHhhhccccccccCCCceEEeeecCEEEECCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccccc
Confidence 56677777777 5554433 788999999999999999999999999999999999 9999999999998764422112
Q ss_pred CCCCCCCChhhhhHhhhhhccCce-eeeeeeeeeecceEEeccccchh
Q psy237 140 LGVFPSGDWPQLLENVLLKQSGSV-SLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 140 ~~~~~~~elAE~Lae~Ll~~ap~~-~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+.+ ...+.+++.+....+.. + + .+.++++|+|++..++.
T Consensus 83 ~~~----~~~~~l~~~la~~~~~~~~---~-~v~~~~gg~ea~~~ai~ 122 (419)
T 2eo5_A 83 FYN----IPQLELAKKLVTYSPGNFQ---K-KVFFSNSGTEAIEASIK 122 (419)
T ss_dssp SCC----HHHHHHHHHHHHHSSCSSC---E-EEEEESSHHHHHHHHHH
T ss_pred cCC----HHHHHHHHHHHHhCCCCcC---C-EEEEeCchHHHHHHHHH
Confidence 222 22334444344444421 1 2 47888999998886553
No 33
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.07 E-value=6.3e-11 Score=106.35 Aligned_cols=105 Identities=15% Similarity=0.116 Sum_probs=77.9
Q ss_pred HhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhh
Q psy237 71 LSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQ 150 (236)
Q Consensus 71 ~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE 150 (236)
.+.++...+.+.|+++++|+|+++||.||++|||+.+++++.++||+||+|.+|+.+++++..+... .+. ....+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~-~~~----~~~~~ 84 (406)
T 4adb_A 10 FDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGN-GYT----NEPVL 84 (406)
T ss_dssp HHHHBCSSCCCCSSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCT-TSC----CHHHH
T ss_pred HHHHhhhhcCCCCceEEeeccCEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccC-CcC----CHHHH
Confidence 3455666677788999999999999999999999999999999999999999999999987654321 222 23344
Q ss_pred hhHhhhhhccCceeeeeeeeeeecceEEeccccchh
Q psy237 151 LLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 151 ~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+++.+....+. + ...++++|+++...++.
T Consensus 85 ~l~~~la~~~~~-~-----~v~~~~gg~~a~~~al~ 114 (406)
T 4adb_A 85 RLAKKLIDATFA-D-----RVFFCNSGAEANEAALK 114 (406)
T ss_dssp HHHHHHHHHSSC-S-----EEEEESSHHHHHHHHHH
T ss_pred HHHHHHHhhCCC-C-----eEEEeCcHHHHHHHHHH
Confidence 444444444432 1 36677888888876554
No 34
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.05 E-value=2.3e-11 Score=111.69 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=71.7
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCC-CCCCCCCCChhhhhHhhhhhcc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRP-ALGVFPSGDWPQLLENVLLKQS 160 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~-~~~~~~~~elAE~Lae~Ll~~a 160 (236)
.|+++++++|+++||.||++|||+.++++++++||+||+|++|+.+|+++.. .+.. .+ ..+..+.+++.+....
T Consensus 32 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~-~~~~~~~----~~~~~~~l~~~la~~~ 106 (449)
T 3a8u_X 32 DPRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD-YSPGFQY----GHPLSFQLAEKITDLT 106 (449)
T ss_dssp SCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS-CCCSSSC----CCHHHHHHHHHHHTTS
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC-Ccccccc----CCHHHHHHHHHHHHhC
Confidence 5788999999999999999999999999999999999999999999998754 2211 12 2233445555455455
Q ss_pred CceeeeeeeeeeecceEEeccccchh
Q psy237 161 GSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 161 p~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
+... + .+.++++|+++.+.++.
T Consensus 107 ~~~~---~-~v~~~~ggsea~~~al~ 128 (449)
T 3a8u_X 107 PGNL---N-HVFFTDSGSECALTAVK 128 (449)
T ss_dssp STTE---E-EEEEESSHHHHHHHHHH
T ss_pred CCCC---C-EEEEcCcHHHHHHHHHH
Confidence 4221 2 47888999998877653
No 35
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.04 E-value=4.2e-11 Score=108.39 Aligned_cols=116 Identities=16% Similarity=0.080 Sum_probs=81.7
Q ss_pred hHHHHHHHHhccccCCc-cccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCC
Q psy237 63 QTKALKQKLSQLQQSGS-VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALG 141 (236)
Q Consensus 63 ~s~~l~~~~~~~~~~~~-~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~ 141 (236)
++++++++..++++... ..+|+++++++|+++||.||++||||.++.++.++||.+|+|++|+.+++++..+.......
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~ 82 (426)
T 1sff_A 3 SNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLA 82 (426)
T ss_dssp CHHHHHHHHHHHSCTTBCCSEEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCTTTEE
T ss_pred hHHHHHHHHHHhcCccccccCCceEEecccCEEEeCCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccccccC
Confidence 46778888888876643 34688999999999999999999999999999999999999999999998765432111111
Q ss_pred CCCCCChhhhhHhhhhhccCc-eeeeeeeeeeecceEEeccccchh
Q psy237 142 VFPSGDWPQLLENVLLKQSGS-VSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 142 ~~~~~elAE~Lae~Ll~~ap~-~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
......+.+.+....++ .+ ..+.++++++++...++.
T Consensus 83 ----~~~~~~l~~~la~~~~~~~~----~~v~~~~g~~~a~~~~~~ 120 (426)
T 1sff_A 83 ----YEPYLELCEIMNQKVPGDFA----KKTLLVTTGSEAVENAVK 120 (426)
T ss_dssp ----CHHHHHHHHHHHHHSSCSSC----EEEEEESSHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHhCCcccc----cEEEEeCchHHHHHHHHH
Confidence 22233344334444432 21 136677888887776543
No 36
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.01 E-value=9.2e-11 Score=106.85 Aligned_cols=98 Identities=16% Similarity=0.056 Sum_probs=69.8
Q ss_pred cccee-eecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 81 SLFVD-YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 81 ~~p~~-i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
++|++ +++++|+++||.||++|||+.++.+++.+||+||+|++|+.+++++..+.....+.+ ...+.+++.+...
T Consensus 23 ~~~~~~~~~~~g~~~~d~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~----~~~~~l~~~la~~ 98 (429)
T 1s0a_A 23 PLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITH----APAIELCRKLVAM 98 (429)
T ss_dssp CCCCEEEEEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEEC----HHHHHHHHHHHHH
T ss_pred cCCceeEEeeeeeEEEeCCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccccccCC----HHHHHHHHHHHHh
Confidence 45665 899999999999999999999999999999999999999999997754321112222 2233343334444
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+... + .+.++++|+|++..++.
T Consensus 99 ~~~~~---~-~v~~~~ggtea~~~ai~ 121 (429)
T 1s0a_A 99 TPQPL---E-CVFLADSGSVAVEVAMK 121 (429)
T ss_dssp SCTTC---C-EEEEESSHHHHHHHHHH
T ss_pred CCCCC---C-EEEEeCCHHHHHHHHHH
Confidence 43111 2 47888999998876553
No 37
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.93 E-value=1.9e-10 Score=107.91 Aligned_cols=57 Identities=21% Similarity=0.274 Sum_probs=49.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--CcccccccCCCCCccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSDDKTSHIPT 226 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~~~~~~~~~ 226 (236)
++++|+++||++|++||||++|++++++||+||+|++|+++ +++.|.+.....+.+.
T Consensus 51 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~ 109 (456)
T 4atq_A 51 EDADGGIIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGY 109 (456)
T ss_dssp EEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHH
T ss_pred EeeecCEEEeCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHH
Confidence 59999999999999999999999999999999999999998 4477877665555443
No 38
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.79 E-value=2.5e-09 Score=100.38 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=43.2
Q ss_pred ceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 162 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 162 ~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
++|+++ ++++|+++||.||++||||++|++++++||+||+|++|+.++
T Consensus 68 ~~P~~i--~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q 115 (454)
T 4ao9_A 68 PFPLTI--ARGEGAALWDADGHRYADFIAEYTAGVYGHSAPEIRDAVIEA 115 (454)
T ss_dssp SCCCEE--EEEETTEEEETTCCEEEESSGGGGTTTTCSCCHHHHHHHHHH
T ss_pred CCCccE--EEeecCEEEECCCCEEEEccccHHhhcccCCCHHHHHHHHHH
Confidence 345544 599999999999999999999999999999999999999983
No 39
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=98.76 E-value=2.7e-09 Score=95.59 Aligned_cols=111 Identities=12% Similarity=0.048 Sum_probs=75.9
Q ss_pred HHHHHHhcccc---CCccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCC
Q psy237 66 ALKQKLSQLQQ---SGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGV 142 (236)
Q Consensus 66 ~l~~~~~~~~~---~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~ 142 (236)
++.++.++|.. ..+.++|+++++++|+++||.+|+.|||+.++.++..+||.+|+|.+|+.++++...+.+. .+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~-~~-- 84 (395)
T 1vef_A 8 DWRALLEAEKTLDSGVYNKHDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQ-TL-- 84 (395)
T ss_dssp -CHHHHHHHHHHBCSCSCCCSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCT-TS--
T ss_pred HHHHHHHhhhhhcccccCCCCccEEecccCEEEeCCCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCcc-cc--
Confidence 44455555533 4456688899999999999999999999999998899999999999999999876543221 11
Q ss_pred CCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEeccccch
Q psy237 143 FPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHI 185 (236)
Q Consensus 143 ~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~ 185 (236)
.....+.+++.+....+... + .+.++++|+++...++
T Consensus 85 --~~~~~~~l~~~la~~~~~~~---~-~v~~~~gg~~a~~~al 121 (395)
T 1vef_A 85 --PTPMRGEFYRTLTAILPPEL---N-RVFPVNSGTEANEAAL 121 (395)
T ss_dssp --CCHHHHHHHHHHHHTSCTTE---E-EEEEESSHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHhcCCCc---C-EEEEcCcHHHHHHHHH
Confidence 23344555554544443111 1 3566677777665544
No 40
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=98.74 E-value=2.2e-09 Score=101.06 Aligned_cols=52 Identities=23% Similarity=0.417 Sum_probs=45.3
Q ss_pred eeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 164 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 164 ~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++++ +++|+++||.+|++||||++|++++++||+||+|++|+++ +++.|++
T Consensus 50 P~vi~--rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~ 103 (473)
T 4e3q_A 50 TVVVT--HGEGPYIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYH 103 (473)
T ss_dssp CEEEE--EEETTEEEETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCC
T ss_pred CEEEE--eeecCEEEeCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhccccc
Confidence 44444 9999999999999999999999999999999999999998 4455554
No 41
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=98.74 E-value=3.1e-09 Score=95.42 Aligned_cols=98 Identities=20% Similarity=0.208 Sum_probs=70.5
Q ss_pred CccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhh
Q psy237 78 GSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLL 157 (236)
Q Consensus 78 ~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll 157 (236)
....+|+++++++|+++||.||++||||.+++++..+||++|+|.+|+.+++++..+... .+ .....+.+++.+.
T Consensus 18 ~~~~~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~-~~----~~~~~~~l~~~la 92 (397)
T 2ord_A 18 TYSRFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSN-LF----WNRPQMELAELLS 92 (397)
T ss_dssp CCCCCSCEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCT-TS----EEHHHHHHHHHHH
T ss_pred cccCCCceEEeeecCEEEECCCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCcc-cc----CCHHHHHHHHHHH
Confidence 455678999999999999999999999999999999999999999999999887543221 11 1233444554444
Q ss_pred hccCceeeeeeeeeeecceEEeccccchh
Q psy237 158 KQSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 158 ~~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
...+ .+ .+.++++|+++...++.
T Consensus 93 ~~~g-~~-----~v~~~~gg~~a~~~al~ 115 (397)
T 2ord_A 93 KNTF-GG-----KVFFANTGTEANEAAIK 115 (397)
T ss_dssp HTTT-SC-----EEEEESSHHHHHHHHHH
T ss_pred HhcC-CC-----eEEEeCCHHHHHHHHHH
Confidence 4443 12 25666777777665443
No 42
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.57 E-value=6.2e-08 Score=88.33 Aligned_cols=67 Identities=13% Similarity=0.061 Sum_probs=55.1
Q ss_pred hhHHHHHHHHhccccCC-ccccceeee-cccccEEEeCCCCEEEeccCCcccccCC-CChHHHHHHhhcccccc
Q psy237 62 PQTKALKQKLSQLQQSG-SVSLFVDYQ-KSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDDPATVK 132 (236)
Q Consensus 62 p~s~~l~~~~~~~~~~~-~~~~p~~i~-~a~G~~l~D~dG~~yLD~~~g~~~~~lG-h~hP~V~~Ai~~q~~~~ 132 (236)
++++++.+++++..+.. ....+.++. +++|+++|| ||++||||.++. ++| |.||+|++|+.+++.+.
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~r~~~~~~~~~~g~~~~~-~g~~~id~~~~~---~lg~~~~~~v~~a~~~~~~~~ 94 (427)
T 2w8t_A 25 SKFDGLIAERQKLLDSGVTDPFAIVMEQVKSPTEAVI-RGKDTILLGTYN---YMGMTFDPDVIAAGKEALEKF 94 (427)
T ss_dssp GGGHHHHHHHHHHHHTTCCCTTCCCCSEEEETTEEEE-TTEEEEECSCCC---TTCGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcceeeeeccccCCCceEee-CCceEEEEECcc---cccCCCCHHHHHHHHHHHHHh
Confidence 46778888887776654 445556788 999999999 999999999883 589 79999999999998763
No 43
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=98.36 E-value=1.9e-07 Score=82.57 Aligned_cols=97 Identities=23% Similarity=0.282 Sum_probs=67.8
Q ss_pred ccccceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhh
Q psy237 79 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLK 158 (236)
Q Consensus 79 ~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~ 158 (236)
..++|+++++++|+++||.+|+.||||.++....++||.+|+|.+++.+++++..+... .+.. ...+.+++.+..
T Consensus 7 ~~~~~~~~~~~~g~~~~~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~-~y~~----~~~~~l~~~la~ 81 (375)
T 2eh6_A 7 YARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSN-LYEN----PWQEELAHKLVK 81 (375)
T ss_dssp CCCEEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCT-TBCC----HHHHHHHHHHHH
T ss_pred CcCCCccEEeeecCEEEeCCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCc-ccCC----HHHHHHHHHHHh
Confidence 34578999999999999999999999999988789999999999999999876432211 1211 223334443443
Q ss_pred ccCceeeeeeeeeeecceEEeccccch
Q psy237 159 QSGSVSLFVDYQKSFGNYLVDVDGNHI 185 (236)
Q Consensus 159 ~ap~~~~~i~~~~~~G~sgsDA~g~a~ 185 (236)
..+ .+ + ...++++++++...++
T Consensus 82 ~~g-~~---~-~v~~~~g~t~a~~~~~ 103 (375)
T 2eh6_A 82 HFW-TE---G-KVFFANSGTESVEAAI 103 (375)
T ss_dssp TSS-SC---E-EEEEESSHHHHHHHHH
T ss_pred hcC-CC---C-eEEEeCchHHHHHHHH
Confidence 332 21 1 3566777888776654
No 44
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.34 E-value=1.5e-07 Score=86.85 Aligned_cols=50 Identities=20% Similarity=0.321 Sum_probs=44.4
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
++++.|+++||.+|++||||.++++++++||+||+|++|+.+ +...|++.
T Consensus 47 ~~~g~G~~v~d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~ 98 (451)
T 3oks_A 47 AVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTCF 98 (451)
T ss_dssp EEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCTT
T ss_pred EEEeecCEEEECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccccC
Confidence 359999999999999999999999999999999999999998 44556543
No 45
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.30 E-value=1.3e-07 Score=87.73 Aligned_cols=49 Identities=22% Similarity=0.323 Sum_probs=43.8
Q ss_pred eeeeecceEEec-ccc--chhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 169 YQKSFGNYLVDV-DGN--HILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 169 ~~~~~G~sgsDA-~g~--a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
++++.|++.||. +|+ +||||.++++++++||+||+|++|+.+ +++.|++
T Consensus 58 ~~~~~G~~l~d~~dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~ 111 (457)
T 3tfu_A 58 AVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVM 111 (457)
T ss_dssp EEEEEBTEEEEEETTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCC
T ss_pred EEeeecCEEEEccCCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCcc
Confidence 358999999999 999 999999999999999999999999998 3455655
No 46
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=98.30 E-value=1.6e-07 Score=86.77 Aligned_cols=50 Identities=26% Similarity=0.375 Sum_probs=44.1
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccccc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCSD 218 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~~ 218 (236)
++++.|+++||.+|++||||.++++++++||+||+|++|+.+ ++..|++.
T Consensus 50 ~~~~~G~~v~d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~ 101 (453)
T 4ffc_A 50 AVDADGGVIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCF 101 (453)
T ss_dssp EEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTT
T ss_pred EEeeecCEEEeCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhcccccc
Confidence 358999999999999999999999999999999999999998 33556543
No 47
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=98.25 E-value=1.9e-06 Score=76.58 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=43.4
Q ss_pred cccceeeecccccEEEeCCCCEEEeccCCcccccCC-CChHHHHHHhhccccccc
Q psy237 80 VSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDDPATVKT 133 (236)
Q Consensus 80 ~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lG-h~hP~V~~Ai~~q~~~~~ 133 (236)
...+..+++++|++||| ||++||||.++ .++| |++|+|.+++.+++.+..
T Consensus 24 ~~~~~~~~~~~g~~v~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~ 74 (399)
T 3tqx_A 24 YKSERIITSPQNAEIKV-GEKEVLNFCAN---NYLGLADHPALIKTAQTVVEQYG 74 (399)
T ss_dssp CCCCCCBCSCSSSEEEE-TTEEEEECSSC---CTTSCTTCHHHHHHHHHHHHHHC
T ss_pred ccccccccCCCCceEee-CCeeEEEeecc---CcccccCCHHHHHHHHHHHHHhC
Confidence 34567789999999999 99999999988 5688 899999999999987743
No 48
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=98.18 E-value=4e-07 Score=84.81 Aligned_cols=44 Identities=64% Similarity=1.198 Sum_probs=41.2
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
++++.|+++||.+|++||||.+|++++++||+||+|++|+.++.
T Consensus 49 ~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~ 92 (472)
T 1ohv_A 49 YEESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQ 92 (472)
T ss_dssp GGGCBBTEEEBTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGG
T ss_pred EEEEEcCEEEeCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999999854
No 49
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=97.48 E-value=2.2e-07 Score=87.20 Aligned_cols=43 Identities=19% Similarity=0.372 Sum_probs=40.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
+++.|+++||.+|++||||.++++++++||+||+|++|+.++.
T Consensus 87 ~~~~G~~l~D~dG~~yiD~~~~~~~~~lGh~~p~V~~Av~~q~ 129 (465)
T 2yky_A 87 AQGTGSRFQDVDGHAYVNFLGEYTAGLFGHSHPVIRAAVERAL 129 (465)
Confidence 4899999999999999999999999999999999999999844
No 50
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.17 E-value=4.4e-07 Score=84.59 Aligned_cols=48 Identities=17% Similarity=0.292 Sum_probs=42.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC--cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP--ATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~--~~~~~~ 217 (236)
+++.|++.||.+|++||||.++++++++||+||+|++|+.++ .+.|.+
T Consensus 41 ~~~~G~~~~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~ 90 (476)
T 3i5t_A 41 THAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYAS 90 (476)
T ss_dssp EEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCC
T ss_pred EEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc
Confidence 589999999999999999999999999999999999999983 344443
No 51
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=98.13 E-value=1.8e-06 Score=77.11 Aligned_cols=51 Identities=18% Similarity=0.197 Sum_probs=44.5
Q ss_pred ccccceeeecccccEEEeCCCCEEEeccCCcccccCCC-ChHHHHHHhhcccccc
Q psy237 79 SVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVK 132 (236)
Q Consensus 79 ~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~ 132 (236)
...+|..+++++|+++||.||++||||.++ .++|| .+|+|.+|+.++++..
T Consensus 24 ~~~~~~~~~~~~g~~~~~~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~ 75 (401)
T 1fc4_A 24 LFKEERIITSAQQADITVADGSHVINFCAN---NYLGLANHPDLIAAAKAGMDSH 75 (401)
T ss_dssp CCCCCCCBCSCSSSEEEBTTSCEEEECCCS---CTTSCTTCHHHHHHHHHHHHHH
T ss_pred CeeeeeeeccCCCceEEeeCCccEEEeecc---CcccccCCHHHHHHHHHHHHHh
Confidence 345678899999999999999999999888 35997 8999999999988753
No 52
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=98.13 E-value=7.9e-07 Score=82.87 Aligned_cols=42 Identities=26% Similarity=0.485 Sum_probs=40.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++.||.+|++||||.++++++++||+||+|++|+.++
T Consensus 42 ~~~~G~~l~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~ 83 (472)
T 3hmu_A 42 TRARGVWLNDSEGEEILDAMAGLWCVNIGYGRDELAEVAARQ 83 (472)
T ss_dssp EEEEBTEEEETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHH
T ss_pred EEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999983
No 53
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.10 E-value=6.4e-07 Score=82.20 Aligned_cols=47 Identities=13% Similarity=0.169 Sum_probs=42.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKC 216 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~ 216 (236)
+++.|+++||.+|++||||.++++++++||+||+|++|+.+ +...|.
T Consensus 31 ~~g~G~~v~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~ 79 (448)
T 3dod_A 31 ESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHS 79 (448)
T ss_dssp EEEEBTEEEETTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCC
T ss_pred EEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCc
Confidence 48999999999999999999999999999999999999998 444443
No 54
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.08 E-value=1.4e-06 Score=79.15 Aligned_cols=41 Identities=34% Similarity=0.560 Sum_probs=39.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.+|++||||.++++++++||+||+|++|+.+
T Consensus 40 ~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~ 80 (429)
T 4e77_A 40 ERADGAYLFDVDGKAYIDYVGSWGPMILGHNHPAIRQAVIE 80 (429)
T ss_dssp EEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHH
T ss_pred EEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999998
No 55
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=98.07 E-value=2.6e-07 Score=92.46 Aligned_cols=58 Identities=9% Similarity=0.006 Sum_probs=49.4
Q ss_pred eeeec--ceEEecccc----chhhhhccccccccCCC-CHHHHHhhhc--CcccccccCCCCCcccc
Q psy237 170 QKSFG--NYLVDVDGN----HILDVYTQISSVPLGYN-HPALLKIFDD--PATVKCSDDKTSHIPTF 227 (236)
Q Consensus 170 ~~~~G--~sgsDA~g~----a~lD~~sg~~~~~lGh~-~p~i~~A~~~--~~~~~~~~~~~~~~~~~ 227 (236)
+++.| +++||.+|+ +|||++||+|++++||+ ||+|++|+++ +++.|++..+.++.|++
T Consensus 361 ~~a~G~g~~l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~ 427 (831)
T 4a0g_A 361 DSRCGENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPAL 427 (831)
T ss_dssp EEEETTEEEEEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHH
T ss_pred EEeeccceEEEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHH
Confidence 47888 489999999 99999999999999999 9999999998 44778765566666654
No 56
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.05 E-value=1.7e-06 Score=78.66 Aligned_cols=42 Identities=17% Similarity=0.312 Sum_probs=40.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++.||.+|++||||.++++++++||+||+|++|+.++
T Consensus 40 ~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~ 81 (429)
T 3k28_A 40 ERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAV 81 (429)
T ss_dssp EEEEBTEEEETTCCEEEESCGGGTTCTTCBSCHHHHHHHHHH
T ss_pred EEeecCEEEECCCCEEEECCCChhhcccCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999883
No 57
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.05 E-value=1.2e-06 Score=80.19 Aligned_cols=46 Identities=22% Similarity=0.292 Sum_probs=42.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVK 215 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~ 215 (236)
+++.|++++|.+|++||||.++++++++||+||+|++|+.+ +...|
T Consensus 36 ~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~ 83 (452)
T 3n5m_A 36 AKAEGCWVEDIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY 83 (452)
T ss_dssp EEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC
T ss_pred EEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC
Confidence 58999999999999999999999999999999999999988 44445
No 58
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.01 E-value=2.2e-06 Score=77.85 Aligned_cols=42 Identities=29% Similarity=0.527 Sum_probs=40.2
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++.||.+|++||||.++++++++||+||+|++|+.++
T Consensus 42 ~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~ 83 (434)
T 3l44_A 42 ERGKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTA 83 (434)
T ss_dssp EEEEBTEEEETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHH
T ss_pred EEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999884
No 59
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=97.98 E-value=3.2e-06 Score=76.56 Aligned_cols=41 Identities=24% Similarity=0.389 Sum_probs=39.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.+|++||||.++++++++||+||+|++|+.+
T Consensus 39 ~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~ 79 (427)
T 3fq8_A 39 DRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKV 79 (427)
T ss_dssp EEEEBTEEEETTSCEEEESSGGGTTCTTCBTCHHHHHHHHH
T ss_pred EEeeeCEEEECCCCEEEECCCchhhhccCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999988
No 60
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=97.96 E-value=3.9e-06 Score=77.08 Aligned_cols=47 Identities=26% Similarity=0.444 Sum_probs=42.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKC 216 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~ 216 (236)
+++.|++.||.+|++||||.+|++++++||+||+|++|+.+ +...|.
T Consensus 63 ~~~~G~~~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~ 111 (439)
T 2oat_A 63 ERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLT 111 (439)
T ss_dssp EEEEBTEEEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCC
T ss_pred EeeecCEEEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcc
Confidence 58999999999999999999999999999999999999998 334443
No 61
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=97.92 E-value=2.4e-06 Score=78.70 Aligned_cols=42 Identities=26% Similarity=0.432 Sum_probs=40.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++++|.+|++||||.++++++++||+||+|++|+.++
T Consensus 37 ~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~ 78 (459)
T 4a6r_A 37 TRGEGVYLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQ 78 (459)
T ss_dssp EEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHH
T ss_pred EEeecCEEEECCCCEEEECCCchhcccCCCCCHHHHHHHHHH
Confidence 489999999999999999999999999999999999999883
No 62
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=97.90 E-value=5.1e-06 Score=76.10 Aligned_cols=47 Identities=26% Similarity=0.454 Sum_probs=42.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKC 216 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~ 216 (236)
+.+.|++.||.+|++||||.+|++++++||+||+|++|+.+ +...+.
T Consensus 52 ~~~~g~~~~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~ 100 (433)
T 1z7d_A 52 KRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTIC 100 (433)
T ss_dssp EEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCC
T ss_pred EeeecCEEEECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCc
Confidence 58999999999999999999999999999999999999998 334443
No 63
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=97.84 E-value=4.6e-06 Score=74.52 Aligned_cols=48 Identities=29% Similarity=0.425 Sum_probs=42.6
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Ccccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKCS 217 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~~ 217 (236)
+++.|++.||.+|++||||.++++++++||+||+|.+|+.+ +...|.+
T Consensus 23 ~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~ 72 (395)
T 3nx3_A 23 EKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTS 72 (395)
T ss_dssp EEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCC
T ss_pred EeeeeeEEEECCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccc
Confidence 48999999999999999999999999999999999999988 4444443
No 64
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=97.83 E-value=5.4e-06 Score=75.44 Aligned_cols=47 Identities=26% Similarity=0.361 Sum_probs=42.2
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc--Cccccc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD--PATVKC 216 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~--~~~~~~ 216 (236)
+.+.|++.||.+|+.|+||.++++++++||++|+|++|+.+ +...+.
T Consensus 44 ~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~ 92 (420)
T 2pb2_A 44 VKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHT 92 (420)
T ss_dssp EEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCC
T ss_pred EeeecCEEEECCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccc
Confidence 58999999999999999999999999999999999999998 344443
No 65
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=97.80 E-value=6.2e-06 Score=75.94 Aligned_cols=42 Identities=17% Similarity=0.331 Sum_probs=40.0
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++++|.+|++||||.++++++++||+||+|++|+.++
T Consensus 38 ~~~~G~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~ 79 (460)
T 3gju_A 38 AGGEGVTVWDNNGRKSIDAFAGLYCVNVGYGRQKIADAIATQ 79 (460)
T ss_dssp EEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHH
T ss_pred EEeeccEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHH
Confidence 489999999999999999999999999999999999999883
No 66
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.78 E-value=3e-05 Score=68.69 Aligned_cols=59 Identities=19% Similarity=0.306 Sum_probs=46.6
Q ss_pred HHhccccCCccccceeeecccccEEEeCCCCEEEeccCCcccccCC-CChHHHHHHhhcccccc
Q psy237 70 KLSQLQQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDDPATVK 132 (236)
Q Consensus 70 ~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lG-h~hP~V~~Ai~~q~~~~ 132 (236)
+..+.-.....++|.++++++|++|| .+|++||||.++. ++| +.+|+|.+++.++++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g~~~id~~~~~---~~~~~~~~~v~~a~~~~~~~~ 69 (384)
T 1bs0_A 10 ALDARRAADALRRRYPVAQGAGRWLV-ADDRQYLNFSSND---YLGLSHHPQIIRAWQQGAEQF 69 (384)
T ss_dssp HHHHCCGGGCCCCCCCCSBCSSSEEE-ETTEEEEECSCCC---TTSGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCccccccccCCCCceEE-ECCceEEEeeccC---ccCCCCCHHHHHHHHHHHHHh
Confidence 33333333445678889999999999 7999999998873 378 69999999999998763
No 67
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=97.75 E-value=1.3e-05 Score=71.31 Aligned_cols=56 Identities=21% Similarity=0.410 Sum_probs=45.5
Q ss_pred HhhhhhccCceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 153 ENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 153 ae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
++++...+...++++ ..+.|++.+|.+|++|+||.+++++.++||++|+|.+|+.+
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~ 63 (392)
T 3ruy_A 8 DTYGANNYHPLPIVI--SKAEGVWVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALID 63 (392)
T ss_dssp HHHBCTTCCCCSCEE--CEEEBTEEECTTCCEEEESSHHHHTCTTCBTCHHHHHHHHH
T ss_pred HhhhhccCCCCCceE--EeeeeCEEEeCCCCEEEEcCCChhhhccCCCCHHHHHHHHH
Confidence 343443444444433 48999999999999999999999999999999999999988
No 68
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.67 E-value=2.3e-05 Score=69.84 Aligned_cols=95 Identities=15% Similarity=0.066 Sum_probs=61.9
Q ss_pred ccceeeecccccEEEeCCCCEEEeccCCcccccCCC-ChHHHHHHhhccccccccccCCCCCCC-CCCChhhhhHhhhhh
Q psy237 81 SLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVKTFVNRPALGVF-PSGDWPQLLENVLLK 158 (236)
Q Consensus 81 ~~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~~~~~~~~~~~~-~~~elAE~Lae~Ll~ 158 (236)
++|.++++++|+++| .||+.+|||.+|.. +|| .+|+|.+++.+++....... ..+... -..++.+.+++.+..
T Consensus 25 ~~~~~~~~~~g~~~~-~~g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~-~~~~~~~g~~~~~~~l~~~la~ 99 (398)
T 3a2b_A 25 AYFRPIQSKQDTEVK-IDGRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGC-AGSRFLNGTLDIHVELEEKLSA 99 (398)
T ss_dssp CSSCCBCSCSSSEEE-ETTEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCC-CSBTTTTCCCHHHHHHHHHHHH
T ss_pred cceeeecCCCCceEE-ECCceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCC-CCcCcccCCcHHHHHHHHHHHH
Confidence 477889999999999 99999999988843 788 89999999999887643211 011111 123445555554444
Q ss_pred ccCceeeeeeeeeeecceEEeccccchh
Q psy237 159 QSGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 159 ~ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+. + ...+.++|+++...++.
T Consensus 100 ~~g~-~-----~v~~~~ggt~a~~~~~~ 121 (398)
T 3a2b_A 100 YVGK-E-----AAILFSTGFQSNLGPLS 121 (398)
T ss_dssp HHTC-S-----EEEEESSHHHHHHHHHH
T ss_pred HhCC-C-----cEEEECCHHHHHHHHHH
Confidence 3332 1 24556667776665444
No 69
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=97.63 E-value=9.3e-06 Score=74.69 Aligned_cols=48 Identities=40% Similarity=0.719 Sum_probs=42.0
Q ss_pred eeeeeeeeeeecceEEe-ccccchhhhhccccccccCCCCHHHH-H-hhhc
Q psy237 163 VSLFVDYQKSFGNYLVD-VDGNHILDVYTQISSVPLGYNHPALL-K-IFDD 210 (236)
Q Consensus 163 ~~~~i~~~~~~G~sgsD-A~g~a~lD~~sg~~~~~lGh~~p~i~-~-A~~~ 210 (236)
++++++++++.|++.|| .+|++||||.++++++++||+||+|+ + |+.+
T Consensus 33 ~~~~~~~~~~~g~~~~d~~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~ 83 (449)
T 2cjg_A 33 LDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHA 83 (449)
T ss_dssp CSSCBCTTTCBBTEEEBTTTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHH
T ss_pred CCeeEEEeeeeeCEEEECCCCcEEEEccCCccccCCCCCCHHHHHHHHHHH
Confidence 34444445899999999 99999999999999999999999999 9 8887
No 70
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=97.56 E-value=3.3e-05 Score=69.93 Aligned_cols=41 Identities=32% Similarity=0.504 Sum_probs=39.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.||.+|++|+||.++++++++||+||+|++|+.+
T Consensus 39 ~~~~g~~~~d~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~ 79 (424)
T 2e7u_A 39 VRGEGAYVWDADGNRYLDYVMSWGPLILGHAHPKVLARVRE 79 (424)
T ss_dssp EEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHH
T ss_pred EeeecCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999988
No 71
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=97.53 E-value=1.9e-05 Score=71.56 Aligned_cols=41 Identities=17% Similarity=0.192 Sum_probs=39.6
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.+|.+|++||||.++++++++||++|+|++|+.+
T Consensus 16 ~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~ 56 (430)
T 3i4j_A 16 VRGEGVFLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAA 56 (430)
T ss_dssp EEEEBTEEEETTSCEEEETTHHHHTCTTCBCCHHHHHHHHH
T ss_pred EeeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999988
No 72
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=97.52 E-value=3.6e-05 Score=68.56 Aligned_cols=57 Identities=19% Similarity=0.342 Sum_probs=46.1
Q ss_pred hHhhhhhccCceeeeeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 152 LENVLLKQSGSVSLFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 152 Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
.+++++..+...+++ .+.+.|++.||.+|++|+||.++++++++||++|++.+|+.+
T Consensus 10 ~~~~~~~~~~~~~~~--~~~~~g~~~~~~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~ 66 (406)
T 4adb_A 10 FDEWMIPVYAPAPFI--PVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNE 66 (406)
T ss_dssp HHHHBCSSCCCCSSC--EEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHH
T ss_pred HHHHhhhhcCCCCce--EEeeccCEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHH
Confidence 344444444444433 358999999999999999999999999999999999999987
No 73
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=97.49 E-value=4.4e-05 Score=69.25 Aligned_cols=41 Identities=24% Similarity=0.536 Sum_probs=39.6
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.+|.+|++|+||.++.+++++||+||+|.+|+.+
T Consensus 30 ~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~ 70 (439)
T 3dxv_A 30 SGGRGARLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSA 70 (439)
T ss_dssp EEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHH
T ss_pred EEeeeCEEEeCCCCEEEECCCchhhccCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999988
No 74
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=97.46 E-value=1.2e-05 Score=72.87 Aligned_cols=95 Identities=9% Similarity=-0.018 Sum_probs=62.4
Q ss_pred cceeeecccccEEEeCC--CCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhc
Q psy237 82 LFVDYQKSFGNYLVDVD--GNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQ 159 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~d--G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ 159 (236)
.+++..+++|+++||.+ |+.||||..| . +.++.+|+|++|+++|++...+ .+ .....++.+.+++.+...
T Consensus 41 ~~~~~~~g~g~~~~d~~~~g~~~i~~~~~--~-~~~~~~~~v~~a~~~~~~~~~~----~y-~~~~~~l~~~l~~~l~~~ 112 (421)
T 3l8a_A 41 TTRPDRLNQFTYKWKTSENNPELLQMWVA--D-MDFLPVPEIKEAIINYGREHIF----GY-NYFNDDLYQAVIDWERKE 112 (421)
T ss_dssp SCCCCCTTTTBTTTGGGTTCTTCEECCSS--C-CCSCCCHHHHHHHHHHHHHCCS----SC-BCCCHHHHHHHHHHHHHH
T ss_pred CcccccCCCCCccccccCCCCCeeecccC--C-CCCCCCHHHHHHHHHHHhcCCc----CC-CCCCHHHHHHHHHHHHHH
Confidence 45678899999999999 8999999665 3 3456999999999999876332 11 122245566666644333
Q ss_pred cCceeeeeeeeeeecceEEeccccchh
Q psy237 160 SGSVSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 160 ap~~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
.+. ... ...+.++++++++.+.++.
T Consensus 113 ~g~-~~~-~~~v~~~~g~~ea~~~a~~ 137 (421)
T 3l8a_A 113 HDY-AVV-KEDILFIDGVVPAISIALQ 137 (421)
T ss_dssp HCC-CCC-GGGEEEESCHHHHHHHHHH
T ss_pred hCC-CCC-HHHEEEcCCHHHHHHHHHH
Confidence 220 000 1136677888877776554
No 75
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=97.46 E-value=5e-05 Score=68.90 Aligned_cols=41 Identities=32% Similarity=0.615 Sum_probs=39.6
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.+|++|+||.++++++++||+||+|++|+.+
T Consensus 43 ~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~ 83 (434)
T 2epj_A 43 KRGEGAYLYTVDGARIVDLVLAYGPLILGHKHPRVLEAVEE 83 (434)
T ss_dssp EEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHH
T ss_pred EeeecCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999988
No 76
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=97.28 E-value=0.00012 Score=66.89 Aligned_cols=42 Identities=29% Similarity=0.422 Sum_probs=39.9
Q ss_pred eeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 169 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 169 ~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
++++.|++.||.+|+.|+||.++++++++||++|+|++|+.+
T Consensus 43 ~~~~~G~~~~d~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~ 84 (453)
T 2cy8_A 43 ISDAQGVHKTDVDGNVYLDFFGGHGALVLGHGHPRVNAAIAE 84 (453)
T ss_dssp EEEEEBTEEEETTCCEEEESCTTTTSCTTCBTCHHHHHHHHH
T ss_pred EEEeecCEEEECCCCEEEECcccHhhcccCCCCHHHHHHHHH
Confidence 358999999999999999999999999999999999999988
No 77
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=97.26 E-value=0.00019 Score=64.89 Aligned_cols=41 Identities=37% Similarity=0.585 Sum_probs=39.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCC-CHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYN-HPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~-~p~i~~A~~~ 210 (236)
+.+.|++.||.+|+.|+||.++.+++++||+ +|+|++|+.+
T Consensus 29 ~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~ 70 (419)
T 2eo5_A 29 DHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIE 70 (419)
T ss_dssp EEEEBTEEEETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHH
T ss_pred EeeecCEEEECCCCEEEEccCChhhhccCCCCCHHHHHHHHH
Confidence 5889999999999999999999999999999 9999999988
No 78
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=97.26 E-value=4.5e-05 Score=67.15 Aligned_cols=93 Identities=12% Similarity=0.006 Sum_probs=59.0
Q ss_pred eeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCce
Q psy237 84 VDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSV 163 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~ 163 (236)
+...+|+|+++||.||++||||.+|. ..+ ..+|+|++|+.+++....+ .+.. ...++.+.+++.+......
T Consensus 7 ~~~~~~~g~~~~d~~g~~~idl~~~~--~~~-~~~~~v~~a~~~~~~~~~~----~y~~-~~~~lr~~la~~~~~~~~~- 77 (377)
T 3fdb_A 7 IEDLRARNTMKWTRYGQGVLPLWVAE--SDF-STCPAVLQAITDAVQREAF----GYQP-DGSLLSQATAEFYADRYGY- 77 (377)
T ss_dssp HHHHHHTCCHHHHSSCTTSEECCSSC--CCS-CCCHHHHHHHHHHHHTTCC----SSCC-SSCCHHHHHHHHHHHHHCC-
T ss_pred HHHhcCCCCceeeccCCCeeeecccC--CCC-CCCHHHHHHHHHHHHcCCC----CCCC-CCHHHHHHHHHHHHHHhCC-
Confidence 34569999999999999999998874 334 4899999999999876322 1222 2366777777644321110
Q ss_pred eeeeeeeeeecceEEeccccchh
Q psy237 164 SLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 164 ~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..-.+ ...++++++++....+.
T Consensus 78 ~~~~~-~i~~t~g~~~a~~~~~~ 99 (377)
T 3fdb_A 78 QARPE-WIFPIPDVVRGLYIAID 99 (377)
T ss_dssp CCCGG-GEEEESCHHHHHHHHHH
T ss_pred CCCHH-HEEEeCChHHHHHHHHH
Confidence 00001 34556667776655443
No 79
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=97.25 E-value=6.1e-05 Score=66.48 Aligned_cols=92 Identities=9% Similarity=-0.018 Sum_probs=58.6
Q ss_pred ceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCc
Q psy237 83 FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGS 162 (236)
Q Consensus 83 p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~ 162 (236)
.++..+++|+++||.+|+.||||..|. +..+.+|+|.+|+.+++....+ .+. ....++.+.+++.+....+.
T Consensus 10 ~~~~~~~~g~~~~d~~g~~~i~~~~~~---~~~~~~~~v~~a~~~~~~~~~~----~y~-~~~~~l~~~la~~l~~~~g~ 81 (391)
T 3dzz_A 10 THVPKRQGNSIKWGVLKEKELPMWIAE---MDFKIAPEIMASMEEKLKVAAF----GYE-SVPAEYYKAVADWEEIEHRA 81 (391)
T ss_dssp SSCCCCCTTBTTTTTCCTTCEECCSSC---CSSCCCHHHHHHHHHHHTTCCC----CCB-CCCHHHHHHHHHHHHHHHSC
T ss_pred chhccCCCCccceeccCCCceeccccC---CCCCCCHHHHHHHHHHHhcCcC----CCC-CCCHHHHHHHHHHHHHHhCC
Confidence 356779999999999999999998773 3456999999999999876432 111 12345566666644332220
Q ss_pred -eeeeeeeeeeecceEEeccccch
Q psy237 163 -VSLFVDYQKSFGNYLVDVDGNHI 185 (236)
Q Consensus 163 -~~~~i~~~~~~G~sgsDA~g~a~ 185 (236)
.. .+ ...++++++++....+
T Consensus 82 ~~~--~~-~i~~~~g~~~a~~~~~ 102 (391)
T 3dzz_A 82 RPK--ED-WCVFASGVVPAISAMV 102 (391)
T ss_dssp CCC--GG-GEEEESCHHHHHHHHH
T ss_pred CCC--HH-HEEECCCHHHHHHHHH
Confidence 00 01 2455666666655443
No 80
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=97.18 E-value=0.00011 Score=66.33 Aligned_cols=41 Identities=29% Similarity=0.582 Sum_probs=39.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.||.+|++|+||.++.++.++||++|+|.+|+.+
T Consensus 30 ~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~ 70 (433)
T 1zod_A 30 ERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGE 70 (433)
T ss_dssp CEEEBTEEECTTCCEEEETTHHHHTCTTCBTCHHHHHHHHH
T ss_pred EEeecCEEEeCCCCEEEEcccchhccccCCCCHHHHHHHHH
Confidence 58899999999999999999999999999999999999988
No 81
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=97.10 E-value=0.00016 Score=65.83 Aligned_cols=42 Identities=17% Similarity=0.289 Sum_probs=39.8
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+.+.|++.||.+|+.|+||.++++++++||++|+|++|+.++
T Consensus 37 ~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~ 78 (449)
T 3a8u_X 37 VAAEGSWLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQ 78 (449)
T ss_dssp EEEEBTEEEETTCCEEEETTHHHHTCTTCBSCHHHHHHHHHH
T ss_pred EeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHH
Confidence 589999999999999999999999999999999999999883
No 82
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=96.86 E-value=0.00046 Score=62.29 Aligned_cols=41 Identities=27% Similarity=0.370 Sum_probs=39.3
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.||.+|+.|+|+.++.+++++||++|+|++|+.+
T Consensus 30 ~~~~g~~~~d~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~ 70 (429)
T 1s0a_A 30 VSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKS 70 (429)
T ss_dssp EEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHH
T ss_pred EeeeeeEEEeCCCCEEEEcCccHhhccCCCCCHHHHHHHHH
Confidence 48899999999999999999999999999999999999988
No 83
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=96.78 E-value=0.00042 Score=62.02 Aligned_cols=44 Identities=11% Similarity=0.038 Sum_probs=36.5
Q ss_pred eecccccEEEeCCCCEEEeccCCcccccCCC-ChHHHHHHhhcccccc
Q psy237 86 YQKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDDPATVK 132 (236)
Q Consensus 86 i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh-~hP~V~~Ai~~q~~~~ 132 (236)
..++.|.+++|.||++||||.+. . .+|+ .||+|++|+.+++++.
T Consensus 45 ~~~~~~~~~~~~~g~~~ld~~s~-~--~l~~~~~p~v~~a~~~~l~~~ 89 (409)
T 3kki_A 45 NKNGKHLVLGKQASPDDIILQSN-D--YLALANHPLIKARLAKSLLEE 89 (409)
T ss_dssp STTSSCTTCCCCCCTTSEECCCS-C--TTCCTTCHHHHHHHHHHHHSC
T ss_pred ccCCCeeeeCCCCCCceEEeecc-C--ccCCcCCHHHHHHHHHHHHHc
Confidence 55889999999999999999775 2 3555 5899999999998873
No 84
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=95.78 E-value=0.00023 Score=63.43 Aligned_cols=45 Identities=13% Similarity=0.108 Sum_probs=37.2
Q ss_pred eeeecccccEEEeCCCC--EEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 84 VDYQKSFGNYLVDVDGN--HILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~--~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++..+|+|+++||.||+ .+|||..|.. .++ .+|+|++|+.+++..
T Consensus 13 ~~~~~~~g~~~~d~~g~~~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~ 59 (392)
T 3b1d_A 13 APNRLSHHTYKWKETETDPQLLPAWIADM--DFE-VMPEVKQAIHDYAEQ 59 (392)
Confidence 34567999999999999 9999977653 455 489999999999865
No 85
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=96.72 E-value=0.001 Score=58.42 Aligned_cols=91 Identities=10% Similarity=0.055 Sum_probs=47.0
Q ss_pred eeeecccccEEEeC-CCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCc
Q psy237 84 VDYQKSFGNYLVDV-DGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGS 162 (236)
Q Consensus 84 ~~i~~a~G~~l~D~-dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~ 162 (236)
++..+++|+++||. +|+.+|||..|. .. .+.+|+|.+|+.+++....+ .+. ....++.+.+++.+....+.
T Consensus 7 ~~~~~~~g~~~~d~~~~~~~i~l~~~~--~~-~~~~~~v~~a~~~~~~~~~~----~y~-~~~~~~~~~l~~~l~~~~g~ 78 (383)
T 3kax_A 7 TVNRRGTHSIKWDTYKNEELIHAWIAD--MD-FEVPQPIQTALKKRIEHPIF----GYT-LPPENIGDIICNWTKKQYNW 78 (383)
T ss_dssp ------------CCCSSSCCEECCCSS--CS-SCCCHHHHHHHHHHHHSCCC----CCC-CCCTTHHHHHHHHHHHHHCC
T ss_pred eeeccCCCceeeeccCCCCeeeccccc--CC-CCCCHHHHHHHHHHHhcCCC----CCC-CCCHHHHHHHHHHHHHHhCC
Confidence 45679999999995 468999998774 33 35899999999999876322 111 12456666666655433220
Q ss_pred -eeeeeeeeeeecceEEeccccch
Q psy237 163 -VSLFVDYQKSFGNYLVDVDGNHI 185 (236)
Q Consensus 163 -~~~~i~~~~~~G~sgsDA~g~a~ 185 (236)
.. .....++++++++....+
T Consensus 79 ~~~---~~~v~~~~g~~~a~~~~~ 99 (383)
T 3kax_A 79 DIQ---KEWIVFSAGIVPALSTSI 99 (383)
T ss_dssp CCC---GGGEEEESCHHHHHHHHH
T ss_pred CCC---hhhEEEcCCHHHHHHHHH
Confidence 00 013556666777665443
No 86
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=96.68 E-value=0.00082 Score=60.17 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=39.2
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.||.+|+.|+||.++.++.++||.+|+|.+|+.+
T Consensus 28 ~~~~g~~~~d~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~ 68 (426)
T 1sff_A 28 DRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEA 68 (426)
T ss_dssp EEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHH
T ss_pred EecccCEEEeCCCCEEEEcccChhhcccCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999987
No 87
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=96.45 E-value=0.001 Score=59.19 Aligned_cols=41 Identities=32% Similarity=0.498 Sum_probs=39.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.||.+|+.|+||.+++++..+||++|++.+|+.+
T Consensus 27 ~~~~g~~~~d~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~ 67 (397)
T 2ord_A 27 VYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKD 67 (397)
T ss_dssp EEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHH
T ss_pred EeeecCEEEECCCCEEEECCccccccccCCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999987
No 88
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=96.45 E-value=0.0014 Score=58.09 Aligned_cols=41 Identities=20% Similarity=0.362 Sum_probs=39.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+.+.|++.||.+|+.|+||.++.+++++||.+|.+.+|+.+
T Consensus 32 ~~~~g~~~~d~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~ 72 (395)
T 1vef_A 32 VRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKR 72 (395)
T ss_dssp EEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHH
T ss_pred EecccCEEEeCCCCEEEEccCccccccCCCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999987
No 89
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=96.34 E-value=0.0018 Score=57.26 Aligned_cols=63 Identities=8% Similarity=0.129 Sum_probs=30.5
Q ss_pred eecccccEEEeCCCC-----EEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCC-hhhhhHhhh
Q psy237 86 YQKSFGNYLVDVDGN-----HILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGD-WPQLLENVL 156 (236)
Q Consensus 86 i~~a~G~~l~D~dG~-----~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~e-lAE~Lae~L 156 (236)
-.+|+|+++||.+|+ .+|||..+. ..+| .+|+|.+|+.++++.... .+... ..+ +.+.+++.+
T Consensus 9 ~~~~~~~~~~d~~~~~~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~----~y~~~-~~~~lr~~la~~l 77 (390)
T 1d2f_A 9 DRHGTWCTQWDYVADRFGTADLLPFTISD--MDFA-TAPCIIEALNQRLMHGVF----GYSRW-KNDEFLAAIAHWF 77 (390)
T ss_dssp ---------------------CEECCSSS--CSSC-CCHHHHHHHHHHHTTCCC----CCCCS-CCHHHHHHHHHHH
T ss_pred cccCCCccchhhhccccCCCCeeEeeecC--CCCC-CCHHHHHHHHHHHhCCCC----CCCCC-ChHHHHHHHHHHH
Confidence 468999999999998 789996653 4677 789999999998864211 12222 445 666666644
No 90
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=95.64 E-value=0.0045 Score=54.21 Aligned_cols=41 Identities=29% Similarity=0.466 Sum_probs=38.7
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
.++.|++.||.+|+.|+||.++...+.+||.+|.+.+|+.+
T Consensus 15 ~~~~g~~~~~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~ 55 (375)
T 2eh6_A 15 VRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKE 55 (375)
T ss_dssp EEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHH
T ss_pred EeeecCEEEeCCCCEEEEcCCcccccccCCCCHHHHHHHHH
Confidence 58999999999999999999999888999999999999987
No 91
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=95.63 E-value=0.00072 Score=60.01 Aligned_cols=64 Identities=11% Similarity=0.185 Sum_probs=43.7
Q ss_pred eeecccccEEEeCCCC-------EEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhh
Q psy237 85 DYQKSFGNYLVDVDGN-------HILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVL 156 (236)
Q Consensus 85 ~i~~a~G~~l~D~dG~-------~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~L 156 (236)
+..+|+|+++||.||+ .++||..|. ..++ .+|+|.+++.+++..... .+.. ...++.+.+++.+
T Consensus 9 ~~~~~~g~~~~d~~g~~~g~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~----~y~~-~~~~l~~~la~~l 79 (399)
T 1c7n_A 9 ISRKNLGSLKWDLMYSQNPEVGNEVVPLSVAD--MEFK-NPPELIEGLKKYLDETVL----GYTG-PTEEYKKTVKKWM 79 (399)
T ss_dssp CCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSS--CSSC-CCHHHHHHHHHHHHHCCC----SSBC-CCHHHHHHHHHHH
T ss_pred ccccCCCccccccchhhccccCCCceeeeecC--CCCC-CCHHHHHHHHHHHhcCCC----CCCC-CcHHHHHHHHHHH
Confidence 3558999999999984 789987664 4456 689999999998864211 1222 2445666666643
No 92
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=95.62 E-value=0.0052 Score=53.43 Aligned_cols=108 Identities=10% Similarity=-0.073 Sum_probs=52.3
Q ss_pred eecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCceee
Q psy237 86 YQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSL 165 (236)
Q Consensus 86 i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~ 165 (236)
+.+++|.+++|.+|+.+|||.++.. .++ .+|+|.+++.+++.... .++.....++.+.+++. ..-.+
T Consensus 1 ~~~~~g~~~~~~~g~~~id~~~~~~--~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~lr~~la~~----~~~~~- 67 (350)
T 3fkd_A 1 MIFGHGDEGITPLSSEIVNFSTTVW--TDG-DKDHLEKHLVENLNCIR-----HYPEPDAGTLRQMLAKR----NSVDN- 67 (350)
T ss_dssp ---------------CCEECSCCSC--CCS-CCHHHHHHHHHTGGGGG-----SCCCTTCHHHHHHHHHH----TTCCG-
T ss_pred CcccccchHhhhccccEEEccCCCC--CCC-CCHHHHHHHHHhHhHHh-----cCCCCcHHHHHHHHHHH----hCcCH-
Confidence 3578999999999999999988864 455 78999999998874322 22222223455555552 22111
Q ss_pred eeeeeeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 166 FVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 166 ~i~~~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+ ...++++++++....+.=+. |=.+...-.+++....++..
T Consensus 68 --~-~i~~t~g~~~al~~~~~~l~-gd~Vi~~~p~~~~~~~~~~~ 108 (350)
T 3fkd_A 68 --N-AILVTNGPTAAFYQIAQAFR-GSRSLIAIPSFAEYEDACRM 108 (350)
T ss_dssp --G-GEEEESHHHHHHHHHHHHTT-TCEEEEEESCCHHHHHHHHH
T ss_pred --H-HEEEcCCHHHHHHHHHHHHC-CCEEEEeCCCcHHHHHHHHH
Confidence 1 35666777777766544333 43333334455555555443
No 93
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=95.58 E-value=0.0011 Score=58.42 Aligned_cols=92 Identities=5% Similarity=-0.033 Sum_probs=58.2
Q ss_pred eeeecccccEEEeCCCCEE-----EeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhh
Q psy237 84 VDYQKSFGNYLVDVDGNHI-----LDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLK 158 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~~y-----LD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~ 158 (236)
++..+++|+++||.+|++| |||..|. +..+.+|+|.+|+.+++....+. +. ....++.+.+++.+..
T Consensus 11 ~~~~~~~g~~~~d~~~~~~~~~~~i~l~~~~---~~~~~~~~v~~a~~~~~~~~~~~----y~-~~~~~~~~~l~~~l~~ 82 (391)
T 4dq6_A 11 IVDRSNNFSSKWSEMEKKYGTNDLLPMWVAD---MDFKAAPCIIDSLKNRLEQEIYG----YT-TRPDSYNESIVNWLYR 82 (391)
T ss_dssp CCCCTTTTBHHHHCHHHHHSCSCSEECCSSS---CSSCCCHHHHHHHHHHHTTCCCC----CB-CCCHHHHHHHHHHHHH
T ss_pred ccccccCCceeeeecccccCCCCceeccccC---CCCCCCHHHHHHHHHHHhCCCCC----CC-CCCHHHHHHHHHHHHH
Confidence 4456899999999998766 8988763 44578999999999998763321 11 1224555666654443
Q ss_pred ccCc-eeeeeeeeeeecceEEeccccchh
Q psy237 159 QSGS-VSLFVDYQKSFGNYLVDVDGNHIL 186 (236)
Q Consensus 159 ~ap~-~~~~i~~~~~~G~sgsDA~g~a~l 186 (236)
..+. .. .+ ...++++++++....+.
T Consensus 83 ~~g~~~~--~~-~v~~~~g~~~a~~~~~~ 108 (391)
T 4dq6_A 83 RHNWKIK--SE-WLIYSPGVIPAISLLIN 108 (391)
T ss_dssp HHCCCCC--GG-GEEEESCHHHHHHHHHH
T ss_pred HhCCCCc--HH-HeEEcCChHHHHHHHHH
Confidence 3320 00 01 35667777777765544
No 94
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=92.48 E-value=0.028 Score=48.66 Aligned_cols=86 Identities=19% Similarity=0.108 Sum_probs=40.1
Q ss_pred ceeeecccccEEEe-CCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccC
Q psy237 83 FVDYQKSFGNYLVD-VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSG 161 (236)
Q Consensus 83 p~~i~~a~G~~l~D-~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap 161 (236)
++++.+|.+.+.++ .+|+.+|||.+|.. .++ .+|+|.+|+.++++.... +++....++.+.+++.+ ...+
T Consensus 8 ~~~~~~g~~~~~~~~~~~~~~idl~~~~~--~~~-~~~~v~~a~~~~~~~~~~-----y~~~~~~~l~~~la~~~-~~~~ 78 (361)
T 3ftb_A 8 GDLMIHGGDIYTEGVFKGRELLDYSSNIN--PLG-IPKSFLNNIDEGIKNLGV-----YPDVNYRRLNKSIENYL-KLKD 78 (361)
T ss_dssp --------------------CEETTCCCC--TTC-SCHHHHTTHHHHHHGGGS-----CCCTTCHHHHHHHHHHH-TCCS
T ss_pred CccccCCCCHHHHhhcCCCCEEEecCCCC--CCC-CCHHHHHHHHHHHHHhcC-----CCCccHHHHHHHHHHHh-CCCc
Confidence 34566666666666 49999999998865 344 589999999998876422 22333345556666532 1111
Q ss_pred ceeeeeeeeeeecceEEeccccc
Q psy237 162 SVSLFVDYQKSFGNYLVDVDGNH 184 (236)
Q Consensus 162 ~~~~~i~~~~~~G~sgsDA~g~a 184 (236)
+ ...++++++++....
T Consensus 79 ------~-~i~~~~g~t~al~~~ 94 (361)
T 3ftb_A 79 ------I-GIVLGNGASEIIELS 94 (361)
T ss_dssp ------C-EEEEESSHHHHHHHH
T ss_pred ------c-eEEEcCCHHHHHHHH
Confidence 1 245566666665543
No 95
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=92.16 E-value=0.091 Score=46.26 Aligned_cols=38 Identities=24% Similarity=0.419 Sum_probs=34.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCC-CCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh-~~p~i~~A~~~ 210 (236)
..+.|++.+|.+|+.|+||.++ +.+|| .+|++.+|+.+
T Consensus 32 ~~~~g~~~~~~~g~~~id~~~~---~~~g~~~~~~v~~a~~~ 70 (401)
T 1fc4_A 32 TSAQQADITVADGSHVINFCAN---NYLGLANHPDLIAAAKA 70 (401)
T ss_dssp CSCSSSEEEBTTSCEEEECCCS---CTTSCTTCHHHHHHHHH
T ss_pred ccCCCceEEeeCCccEEEeecc---CcccccCCHHHHHHHHH
Confidence 5889999999999999999998 46997 89999999987
No 96
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=91.14 E-value=0.13 Score=44.96 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=33.5
Q ss_pred eeeecceEEeccccchhhhhccccccccC-CCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lG-h~~p~i~~A~~~ 210 (236)
+.+.|.+++| +|+.|+||.++ +.+| |++|.+.+++.+
T Consensus 31 ~~~~g~~v~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~ 68 (399)
T 3tqx_A 31 TSPQNAEIKV-GEKEVLNFCAN---NYLGLADHPALIKTAQT 68 (399)
T ss_dssp CSCSSSEEEE-TTEEEEECSSC---CTTSCTTCHHHHHHHHH
T ss_pred cCCCCceEee-CCeeEEEeecc---CcccccCCHHHHHHHHH
Confidence 4789999999 99999999998 6789 899999999987
No 97
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=90.08 E-value=0.05 Score=47.02 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=30.9
Q ss_pred cccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 88 KSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 88 ~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
..+|.++++.+|+.+|||.++. ..++ .+|+|++|+.++++.
T Consensus 4 ~~~~~~~~~~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~ 44 (354)
T 3ly1_A 4 QPESAAFTAPSTDNPIRINFNE--NPLG-MSPKAQAAARDAVVK 44 (354)
T ss_dssp -----CCCCCCSSSCEECSSCC--CSSC-CCHHHHHHHHHTGGG
T ss_pred CcccccccCCCCCceEEccCCC--CCCC-CCHHHHHHHHHHHhh
Confidence 4568889999999999999876 3444 789999999998875
No 98
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=90.05 E-value=0.035 Score=48.76 Aligned_cols=48 Identities=2% Similarity=-0.135 Sum_probs=38.3
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
.++....+.+..++|.+|+.+|||.+|.. .++ .+|+|.+|+.++++..
T Consensus 12 ~~~~~~~~~~~~~~~~~g~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~ 59 (396)
T 3jtx_A 12 YPFARLHEAMQGISAPEGMEAVPLHIGEP--KHP-TPKVITDALTASLHEL 59 (396)
T ss_dssp CHHHHHHHHTTTCCCCTTCCCEECSCCSC--CSC-CCHHHHHHHHHTGGGG
T ss_pred ChHHHHHHHHHhhhhccCCCeEEeCCcCC--CCC-CCHHHHHHHHHHhhhc
Confidence 44555677888889999999999999874 344 6899999999988643
No 99
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=89.11 E-value=0.14 Score=45.91 Aligned_cols=36 Identities=14% Similarity=0.022 Sum_probs=32.7
Q ss_pred eeecceEEeccccchhhhhccccccccC-CCCHHHHHhhhc
Q psy237 171 KSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDD 210 (236)
Q Consensus 171 ~~~G~sgsDA~g~a~lD~~sg~~~~~lG-h~~p~i~~A~~~ 210 (236)
.+.|++.+| +|+.++||.++. ++| |.+|+|.+|+.+
T Consensus 53 ~~~g~~~~~-~g~~~id~~~~~---~lg~~~~~~v~~a~~~ 89 (427)
T 2w8t_A 53 VKSPTEAVI-RGKDTILLGTYN---YMGMTFDPDVIAAGKE 89 (427)
T ss_dssp EEETTEEEE-TTEEEEECSCCC---TTCGGGCHHHHHHHHH
T ss_pred cCCCceEee-CCceEEEEECcc---cccCCCCHHHHHHHHH
Confidence 789999999 999999999983 589 799999999987
No 100
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=88.66 E-value=0.15 Score=44.36 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=28.2
Q ss_pred EeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 95 VDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 95 ~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++.||+++|||.+|. .++| .+|+|.+++.++++.
T Consensus 19 ~~~~~~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~ 52 (364)
T 1lc5_A 19 LGISPDQLLDFSANI--NPLG-MPVSVKRALIDNLDC 52 (364)
T ss_dssp HTSCGGGSEECSSCC--CTTC-CCHHHHHHHHHTGGG
T ss_pred cCCCccceEEecccc--CCCC-CCHHHHHHHHHHHHH
Confidence 456899999998876 4578 789999999998865
No 101
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=88.07 E-value=0.26 Score=43.34 Aligned_cols=55 Identities=11% Similarity=-0.009 Sum_probs=36.2
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC-CCCChhhhhHhhh
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF-PSGDWPQLLENVL 156 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~-~~~elAE~Lae~L 156 (236)
|+.+|||.+|... ..||.+|+|.+++.+++++..... . +... ...++.+.+++.+
T Consensus 33 g~~~idl~~g~~~-~~~~~~~~v~~a~~~~~~~~~~~~-~-y~~~~~~~~l~~~la~~~ 88 (407)
T 2zc0_A 33 GVKLISLAAGDPD-PELIPRAVLGEIAKEVLEKEPKSV-M-YTPANGIPELREELAAFL 88 (407)
T ss_dssp SCCCEECCSCCCC-TTTSCHHHHHHHHHHHHHHCGGGG-S-CCCTTCCHHHHHHHHHHH
T ss_pred CCceEeCCCCCCC-chhCCHHHHHHHHHHHHhhccccc-c-CCCCCCCHHHHHHHHHHH
Confidence 7889999888764 358999999999999987643111 1 2221 2345566666644
No 102
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=85.28 E-value=0.49 Score=41.55 Aligned_cols=33 Identities=15% Similarity=0.194 Sum_probs=24.9
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
||++|+||.++.. ..+|+ +|+|.+|+.+++++.
T Consensus 44 ~g~~~i~~~~~~~-~~~~~-~p~v~~a~~~~~~~~ 76 (401)
T 2bwn_A 44 GKQDITVWCGNDY-LGMGQ-HPVVLAAMHEALEAV 76 (401)
T ss_dssp CEEEEEECSCSCT-TSGGG-CHHHHHHHHHHHHHH
T ss_pred CCCcEEEeeCCCc-ccCCC-CHHHHHHHHHHHHHc
Confidence 7899999987532 22444 789999999998764
No 103
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=82.16 E-value=0.16 Score=44.64 Aligned_cols=47 Identities=11% Similarity=0.000 Sum_probs=29.9
Q ss_pred eeeecccccEEEeCCCC---EEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 84 VDYQKSFGNYLVDVDGN---HILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 84 ~~i~~a~G~~l~D~dG~---~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
-++.+++|.++++.+++ ++|||.+|... +++ .+|+|++|+.++++..
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~id~~~g~~~-~~~-~~~~v~~a~~~~~~~~ 69 (407)
T 3nra_A 20 EVRQSAAGLEALIRGAPIEGRPVDFSHGDVD-AHE-PTPGAFDLFSAGVQSG 69 (407)
T ss_dssp -------CCTTTCCSCCCCSCCEETTSCCTT-TSC-CCTTHHHHHHHHHHHT
T ss_pred HHHHHhhhhHHHhhcCCCCCceeeecCcCCC-CCC-CcHHHHHHHHHHHhcC
Confidence 35778888888766666 69999877432 333 7899999999998753
No 104
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=74.59 E-value=0.51 Score=40.81 Aligned_cols=38 Identities=16% Similarity=0.224 Sum_probs=31.9
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
.++.|++.||.+|+.++||.++. ..+ +.+|+|.+|+.+
T Consensus 10 ~~~~g~~~~d~~g~~~idl~~~~--~~~-~~~~~v~~a~~~ 47 (377)
T 3fdb_A 10 LRARNTMKWTRYGQGVLPLWVAE--SDF-STCPAVLQAITD 47 (377)
T ss_dssp HHHTCCHHHHSSCTTSEECCSSC--CCS-CCCHHHHHHHHH
T ss_pred hcCCCCceeeccCCCeeeecccC--CCC-CCCHHHHHHHHH
Confidence 36889999999999999998873 334 489999999987
No 105
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=73.56 E-value=1.8 Score=37.31 Aligned_cols=79 Identities=6% Similarity=-0.137 Sum_probs=45.1
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCC-CCChhhhhHhhhhhccCceeeeeeeeeeecc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFP-SGDWPQLLENVLLKQSGSVSLFVDYQKSFGN 175 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~-~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~ 175 (236)
.+| .+|||.+|.. .++ .+|+|++|+.+++..... ++... ..++.+.+++.+...++- ..- .....+++
T Consensus 21 ~~g-~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~-----y~~~~g~~~lr~~la~~l~~~~g~-~~~-~~~i~~t~ 89 (376)
T 3ezs_A 21 PKK-RGLDLGIGEP--QFE-TPKFIQDALKNHTHSLNI-----YPKSAFEESLRAAQRGFFKRRFKI-ELK-ENELISTL 89 (376)
T ss_dssp CSS-CCCBCSSCCC--CSC-CCHHHHHHHHTTGGGGGS-----CCCTTCCHHHHHHHHHHHHHHHSC-CCC-GGGEEEES
T ss_pred ccC-CEEEeCCCCC--CCC-CCHHHHHHHHHhhhhcCC-----CCCCCCCHHHHHHHHHHHHHHhCC-CCC-HHHEEECc
Confidence 467 8999988874 455 689999999998843321 22211 235666666644322221 000 01356667
Q ss_pred eEEeccccchh
Q psy237 176 YLVDVDGNHIL 186 (236)
Q Consensus 176 sgsDA~g~a~l 186 (236)
+++++....+.
T Consensus 90 g~~~al~~~~~ 100 (376)
T 3ezs_A 90 GSREVLFNFPS 100 (376)
T ss_dssp SSHHHHHHHHH
T ss_pred CcHHHHHHHHH
Confidence 77777665443
No 106
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=73.52 E-value=1.5 Score=37.94 Aligned_cols=37 Identities=24% Similarity=0.536 Sum_probs=31.6
Q ss_pred eeeecceEEeccccchhhhhccccccccC-CCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLG-YNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lG-h~~p~i~~A~~~ 210 (236)
..+.|++.+ .+|+.|+||.++. ++| |.+|.+.+|+.+
T Consensus 27 ~~~~g~~~~-~~g~~~id~~~~~---~~~~~~~~~v~~a~~~ 64 (384)
T 1bs0_A 27 AQGAGRWLV-ADDRQYLNFSSND---YLGLSHHPQIIRAWQQ 64 (384)
T ss_dssp SBCSSSEEE-ETTEEEEECSCCC---TTSGGGCHHHHHHHHH
T ss_pred cCCCCceEE-ECCceEEEeeccC---ccCCCCCHHHHHHHHH
Confidence 478899998 7899999999873 378 689999999987
No 107
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=71.63 E-value=0.82 Score=40.64 Aligned_cols=38 Identities=8% Similarity=0.040 Sum_probs=31.6
Q ss_pred eeeecceEEecc--ccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVD--GNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~--g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.+ |+.|+||..+ . +.++.+|+|++|+.+
T Consensus 46 ~~g~g~~~~d~~~~g~~~i~~~~~--~-~~~~~~~~v~~a~~~ 85 (421)
T 3l8a_A 46 RLNQFTYKWKTSENNPELLQMWVA--D-MDFLPVPEIKEAIIN 85 (421)
T ss_dssp CTTTTBTTTGGGTTCTTCEECCSS--C-CCSCCCHHHHHHHHH
T ss_pred cCCCCCccccccCCCCCeeecccC--C-CCCCCCHHHHHHHHH
Confidence 578999999999 8999999554 3 445689999999987
No 108
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=71.33 E-value=0.87 Score=39.41 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=32.4
Q ss_pred eeeecceEEeccccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.+|+.++||..+ .+..+.+|.|.+|+.+
T Consensus 14 ~~~~g~~~~d~~g~~~i~~~~~---~~~~~~~~~v~~a~~~ 51 (391)
T 3dzz_A 14 KRQGNSIKWGVLKEKELPMWIA---EMDFKIAPEIMASMEE 51 (391)
T ss_dssp CCCTTBTTTTTCCTTCEECCSS---CCSSCCCHHHHHHHHH
T ss_pred cCCCCccceeccCCCceecccc---CCCCCCCHHHHHHHHH
Confidence 5789999999999999999876 3444589999999987
No 109
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=70.94 E-value=0.71 Score=41.43 Aligned_cols=67 Identities=10% Similarity=-0.059 Sum_probs=37.7
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCC-CCChhhhhHhhhhhccCceeeeeeeeeeecceE
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFP-SGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYL 177 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~-~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sg 177 (236)
|+.|||+.+++++ |+|++|+.+++..... .+...+ ..++.+.+++ ..+. . ...+.++|
T Consensus 40 ~~~ylD~~~~~~~-------~~v~~a~~~~l~~~~~----~y~~~~~~~~l~~~la~----~~~~-~-----~v~~t~~g 98 (467)
T 2oqx_A 40 EDVFIDLLTDSGT-------GAVTQSMQAAMMRGDE----AYSGSRSYYALAESVKN----IFGY-Q-----YTIPTHQG 98 (467)
T ss_dssp GGCSEECSCCSSC-------SCCCHHHHHHTTSCCC----CSSSCHHHHHHHHHHHH----HHCC-S-----EEEEEC--
T ss_pred CCeeEecccCCCc-------HHHHHHHHHHhccCcc----eeccCchhHHHHHHHHH----HhCc-C-----cEEEcCCc
Confidence 6789999888765 8899998888754221 122111 1234444444 3332 1 25667788
Q ss_pred Eeccccchh
Q psy237 178 VDVDGNHIL 186 (236)
Q Consensus 178 sDA~g~a~l 186 (236)
++++..++.
T Consensus 99 t~A~~~al~ 107 (467)
T 2oqx_A 99 RGAEQIYIP 107 (467)
T ss_dssp CCSHHHHHH
T ss_pred HHHHHHHHH
Confidence 887765543
No 110
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=67.83 E-value=1.2 Score=39.13 Aligned_cols=28 Identities=14% Similarity=-0.017 Sum_probs=23.2
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhcccc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPAT 130 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~ 130 (236)
.++..|||+.++ |+.+|+|++|+.+++.
T Consensus 20 ~~~~iyld~~~~------~~~~~~v~~a~~~~~~ 47 (423)
T 3lvm_A 20 MKLPIYLDYSAT------TPVDPRVAEKMMQFMT 47 (423)
T ss_dssp CCSSEECBTTTC------CCCCHHHHHHHTTSSS
T ss_pred cCCCEeecCCCc------CCCCHHHHHHHHHHHh
Confidence 467789997654 6889999999999987
No 111
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=66.58 E-value=2.2 Score=37.27 Aligned_cols=33 Identities=9% Similarity=-0.068 Sum_probs=26.9
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
++.+|||.+|.... .||.+|+|.+++.+++++.
T Consensus 31 ~~~~i~l~~g~~~~-~~~~~~~v~~a~~~~~~~~ 63 (397)
T 2zyj_A 31 RPGILSFAGGLPAP-ELFPKEEAAEAAARILREK 63 (397)
T ss_dssp STTCEEESSCCCCG-GGCCHHHHHHHHHHHHHHH
T ss_pred CCCceecCCCCCCc-hhCCHHHHHHHHHHHHHhc
Confidence 45689998887654 5899999999999998763
No 112
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=64.74 E-value=3.9 Score=35.88 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=25.6
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
.+|+++|||.+|.. .+| .+|.|.+++.++++..
T Consensus 34 ~~g~~~idl~~g~~--~~~-~~~~v~~a~~~~~~~~ 66 (412)
T 2x5d_A 34 RRGEDIIDLSMGNP--DGP-TPPHIVEKLCTVAQRE 66 (412)
T ss_dssp HTTCCCEECSSCCC--CSC-CCHHHHHHHHHTC---
T ss_pred hcCCCEEecCCCCC--CCC-CCHHHHHHHHHHHhCC
Confidence 57899999988864 567 7999999999998764
No 113
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=63.93 E-value=4.5 Score=34.96 Aligned_cols=62 Identities=8% Similarity=0.010 Sum_probs=32.9
Q ss_pred cEEEeCCCCEEEeccCCcccccCC--CChHHHHHHhhccccccccccCCCC-CCCCCCChhhhhHhhh
Q psy237 92 NYLVDVDGNHILDVYTQISSVPLG--YNHPALLKIFDDPATVKTFVNRPAL-GVFPSGDWPQLLENVL 156 (236)
Q Consensus 92 ~~l~D~dG~~yLD~~~g~~~~~lG--h~hP~V~~Ai~~q~~~~~~~~~~~~-~~~~~~elAE~Lae~L 156 (236)
..+.+..|+.+|||..|....+.| +.+|+|.+++.++++... .+ .+ ...-..++.+.+++.+
T Consensus 18 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~--~y~~~~g~~~lr~~la~~~ 82 (396)
T 2q7w_A 18 DLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENET-TK--NYLGIDGIPEFGRCTQELL 82 (396)
T ss_dssp ----------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCC-CC--CCCCTTCCHHHHHHHHHHH
T ss_pred HHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCccc-cc--CCCCCCCCHHHHHHHHHHH
Confidence 334444578899999998655566 667999999998875421 11 12 1222345566666633
No 114
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=61.90 E-value=4 Score=35.08 Aligned_cols=80 Identities=3% Similarity=-0.146 Sum_probs=45.4
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC-CCCChhhhhHhhhhhccCceeeeeeeeeeecce
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF-PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNY 176 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~-~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~s 176 (236)
+|+.++||.+|.. .+|+ +|+|.+++.++++.... .+... -..++.+.+++.+..... ...-.+ ...++++
T Consensus 27 ~g~~~i~l~~~~~--~~~~-~~~v~~a~~~~~~~~~~----~y~~~~~~~~l~~~la~~~~~~~g-~~~~~~-~v~~~~g 97 (370)
T 2z61_A 27 EGKKVIHLEIGEP--DFNT-PKPIVDEGIKSLKEGKT----HYTDSRGILELREKISELYKDKYK-ADIIPD-NIIITGG 97 (370)
T ss_dssp TTCCCEECCCCSC--SSCC-CHHHHHHHHHHHHTTCC----SCCCTTCCHHHHHHHHHHHHHHSS-CCCCGG-GEEEESS
T ss_pred cCCCEEEccCCCC--CCCC-CHHHHHHHHHHHHcCcc----CCCCCCCCHHHHHHHHHHHHHHhC-CCCChh-hEEECCC
Confidence 4788999988764 5787 89999999998865311 12211 133556666664432111 000001 3556677
Q ss_pred EEeccccchh
Q psy237 177 LVDVDGNHIL 186 (236)
Q Consensus 177 gsDA~g~a~l 186 (236)
++++....+.
T Consensus 98 ~~~a~~~~~~ 107 (370)
T 2z61_A 98 SSLGLFFALS 107 (370)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 7776665443
No 115
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=60.52 E-value=3.5 Score=36.50 Aligned_cols=32 Identities=6% Similarity=0.044 Sum_probs=27.0
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++.+|||.+|.... .||.+|+|.+++.++++.
T Consensus 42 ~~~~idl~~g~~~~-~~~~~~~v~~a~~~~~~~ 73 (425)
T 1vp4_A 42 DKDAISFGGGVPDP-ETFPRKELAEIAKEIIEK 73 (425)
T ss_dssp STTCEECCCCSCCG-GGSCHHHHHHHHHHHHHH
T ss_pred CCCceeCCCCCCCc-ccCCHHHHHHHHHHHHhh
Confidence 56799999988654 599999999999998875
No 116
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=64.12 E-value=1.9 Score=37.67 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=31.3
Q ss_pred eeeecceEEecccc--chhhhhccccccccCCCCHHHHHhhhcC
Q psy237 170 QKSFGNYLVDVDGN--HILDVYTQISSVPLGYNHPALLKIFDDP 211 (236)
Q Consensus 170 ~~~~G~sgsDA~g~--a~lD~~sg~~~~~lGh~~p~i~~A~~~~ 211 (236)
+++.|++.||.+|+ .++||.++. ..++ .+|+|.+|+.++
T Consensus 16 ~~~~g~~~~d~~g~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~ 56 (392)
T 3b1d_A 16 RLSHHTYKWKETETDPQLLPAWIAD--MDFE-VMPEVKQAIHDY 56 (392)
Confidence 57899999999999 999997664 3555 478899998873
No 117
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=58.40 E-value=3.1 Score=35.26 Aligned_cols=28 Identities=7% Similarity=0.107 Sum_probs=22.1
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhcccc
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPAT 130 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~ 130 (236)
...+|||.++ +.++.+|+|++|+.+++.
T Consensus 6 ~~~~id~~~~----~~~~~~~~v~~a~~~~~~ 33 (356)
T 1v72_A 6 RPPALGFSSD----NIAGASPEVAQALVKHSS 33 (356)
T ss_dssp CCCCCBCSCG----GGCCCCHHHHHHHHHTTS
T ss_pred CCceEeeccC----CccCCCHHHHHHHHhhcc
Confidence 3568898875 347899999999999863
No 118
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=57.38 E-value=1.5 Score=38.75 Aligned_cols=47 Identities=6% Similarity=-0.077 Sum_probs=36.0
Q ss_pred cceeeecccccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 82 LFVDYQKSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 82 ~p~~i~~a~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.++....+.+..++|.+|+.+|||.+|.. .++ .+|+|.+|+.+++..
T Consensus 26 ~~~~~~~~~~~~~~~~~g~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~ 72 (437)
T 3g0t_A 26 ASIRDLVALVTNLEKATGTKFCRMEMGVP--GLP-APQIGIETEIQKLRE 72 (437)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCEECCCCSC--CSC-CCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCEEeccCcCC--CCC-CCHHHHHHHHHHHhC
Confidence 33444456667788889999999999875 454 789999999998875
No 119
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=56.53 E-value=3.4 Score=35.83 Aligned_cols=38 Identities=8% Similarity=0.168 Sum_probs=17.9
Q ss_pred eeeecceEEecccc-----chhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGN-----HILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~-----a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|+..||.+|+ .++||.++ ...+| .+|+|.+|+.+
T Consensus 10 ~~~~~~~~~d~~~~~~~~~~~i~l~~~--~~~~~-~~~~v~~a~~~ 52 (390)
T 1d2f_A 10 RHGTWCTQWDYVADRFGTADLLPFTIS--DMDFA-TAPCIIEALNQ 52 (390)
T ss_dssp --------------------CEECCSS--SCSSC-CCHHHHHHHHH
T ss_pred ccCCCccchhhhccccCCCCeeEeeec--CCCCC-CCHHHHHHHHH
Confidence 57889999999997 68898554 45677 78999999987
No 120
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=55.53 E-value=3.3 Score=36.28 Aligned_cols=37 Identities=14% Similarity=0.038 Sum_probs=30.1
Q ss_pred eeecceEEeccccchhhhhccccccccCC-CCHHHHHhhhc
Q psy237 171 KSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDD 210 (236)
Q Consensus 171 ~~~G~sgsDA~g~a~lD~~sg~~~~~lGh-~~p~i~~A~~~ 210 (236)
.+.+.+.++.+|++|+||.+. ..+|+ .||+|++|+.+
T Consensus 47 ~~~~~~~~~~~g~~~ld~~s~---~~l~~~~~p~v~~a~~~ 84 (409)
T 3kki_A 47 NGKHLVLGKQASPDDIILQSN---DYLALANHPLIKARLAK 84 (409)
T ss_dssp TSSCTTCCCCCCTTSEECCCS---CTTCCTTCHHHHHHHHH
T ss_pred CCCeeeeCCCCCCceEEeecc---CccCCcCCHHHHHHHHH
Confidence 566778888999999999774 45666 58999999987
No 121
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=55.45 E-value=4 Score=35.52 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=32.1
Q ss_pred eeeecceEEeccccchhhhhccccccccCC-CCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHILDVYTQISSVPLGY-NHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~lD~~sg~~~~~lGh-~~p~i~~A~~~ 210 (236)
..+.|.+.+ .+|+.++||.++.. +|| .++.+.+|+.+
T Consensus 31 ~~~~g~~~~-~~g~~~idl~~~~~---~~~~~~~~v~~a~~~ 68 (398)
T 3a2b_A 31 QSKQDTEVK-IDGRRVLMFGSNSY---LGLTTDTRIIKAAQD 68 (398)
T ss_dssp CSCSSSEEE-ETTEEEEECSCSCT---TCGGGCHHHHHHHHH
T ss_pred cCCCCceEE-ECCceEEEeecccc---cCCCCCHHHHHHHHH
Confidence 488999999 89999999998733 788 89999999987
No 122
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=51.52 E-value=8.6 Score=33.64 Aligned_cols=81 Identities=6% Similarity=-0.112 Sum_probs=45.2
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC-CCCChhhhhHhhhhhccCceeeeeeeeeeecc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF-PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGN 175 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~-~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~ 175 (236)
.+|+.+|||.+|.. .+| .+|+|.+++ ++++.... .+... ...++.+.+++.+..... ...- ...+.+++
T Consensus 40 ~~g~~~i~l~~~~~--~~~-~~~~v~~a~-~~l~~~~~----~y~~~~g~~~l~~~la~~~~~~~g-~~~~-~~~v~~~~ 109 (409)
T 2gb3_A 40 KRGVRIHHLNIGQP--DLK-TPEVFFERI-YENKPEVV----YYSHSAGIWELREAFASYYKRRQR-VDVK-PENVLVTN 109 (409)
T ss_dssp HTTCEEEECSSCCC--CSC-CCTHHHHHH-HHTCCSSC----CCCCTTCCHHHHHHHHHHHHHTSC-CCCC-GGGEEEES
T ss_pred hcCCCEEeccCCCC--CCC-CCHHHHHHH-HHHhcCCC----CCCCCCCcHHHHHHHHHHHHHHhC-CCCC-HHHEEEeC
Confidence 36889999988765 456 478999999 88765321 12111 123556666664432111 0000 01356667
Q ss_pred eEEeccccchhh
Q psy237 176 YLVDVDGNHILD 187 (236)
Q Consensus 176 sgsDA~g~a~lD 187 (236)
+++++....+.-
T Consensus 110 g~t~a~~~~~~~ 121 (409)
T 2gb3_A 110 GGSEAILFSFAV 121 (409)
T ss_dssp HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 777777665543
No 123
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=50.16 E-value=9.2 Score=33.00 Aligned_cols=34 Identities=9% Similarity=-0.097 Sum_probs=26.4
Q ss_pred CCCEEEeccCCcccccCC--CChHHHHHHhhccccc
Q psy237 98 DGNHILDVYTQISSVPLG--YNHPALLKIFDDPATV 131 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lG--h~hP~V~~Ai~~q~~~ 131 (236)
.|..+|||..|....+.| +.+|+|.+|+.++++.
T Consensus 24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~ 59 (394)
T 2ay1_A 24 PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLET 59 (394)
T ss_dssp CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHH
T ss_pred CCccccccccceeeCCCCCccCcHHHHHHHHHhcCC
Confidence 356689998887655556 7789999999988754
No 124
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=49.10 E-value=8 Score=33.20 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=26.1
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.+|+.+|||.+|.. .+| .+|+|.+|+.++++.
T Consensus 22 ~~g~~~idl~~~~~--~~~-~~~~v~~a~~~~~~~ 53 (376)
T 2dou_A 22 ERGVGLIDLSIGST--DLP-PPEAPLKALAEALND 53 (376)
T ss_dssp HTTCCCEECSSCCC--CCC-CCHHHHHHHHHHTTC
T ss_pred ccCCCEEeccCCCC--CCC-CCHHHHHHHHHHHhC
Confidence 36888999988864 577 489999999998865
No 125
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=47.99 E-value=1.5 Score=39.28 Aligned_cols=26 Identities=12% Similarity=0.030 Sum_probs=19.0
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhcccc
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPAT 130 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~ 130 (236)
.|+.||||.+++++ ++|.+++.+++.
T Consensus 41 ~g~~ylD~~~~~~~-------~~v~~a~~~~~~ 66 (467)
T 1ax4_A 41 SSAVYIDLLTDSGT-------NAMSDHQWAAMI 66 (467)
T ss_dssp GGGCSEECSCSSSC-------CCEEHHHHHHHH
T ss_pred CCceeeecccCcCC-------HHHHHHHHHHHh
Confidence 47889999888765 677777666544
No 126
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=47.88 E-value=7.3 Score=33.66 Aligned_cols=80 Identities=10% Similarity=-0.049 Sum_probs=41.6
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCC-CCChhhhhHhhhhhccCceeeeeeeeeeecc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFP-SGDWPQLLENVLLKQSGSVSLFVDYQKSFGN 175 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~-~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~ 175 (236)
.+|+++|||.+|... ++. +|+|++++.+++..... .+.... ..++.+.+++.+...+. ...- ...+.+++
T Consensus 28 ~~g~~~i~l~~g~~~--~~~-~~~v~~a~~~~~~~~~~----~y~~~~g~~~lr~~ia~~~~~~~g-~~~~-~~~v~~t~ 98 (391)
T 3h14_A 28 EAGRRIIHMEVGQPG--TGA-PRGAVEALAKSLETDAL----GYTVALGLPALRQRIARLYGEWYG-VDLD-PGRVVITP 98 (391)
T ss_dssp HTTCCCEECCCSSCS--SCS-CHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHHC-CCCC-GGGEEEES
T ss_pred hcCCCeEEccCCCCC--CCC-CHHHHHHHHHHHhcCCC----CCCCCCChHHHHHHHHHHHHHHhC-CCCC-HHHEEEec
Confidence 378999999998754 444 89999999998875321 122211 24556666664422111 0000 01245556
Q ss_pred eEEeccccch
Q psy237 176 YLVDVDGNHI 185 (236)
Q Consensus 176 sgsDA~g~a~ 185 (236)
+++++....+
T Consensus 99 g~~~al~~~~ 108 (391)
T 3h14_A 99 GSSGGFLLAF 108 (391)
T ss_dssp SHHHHHHHHH
T ss_pred ChHHHHHHHH
Confidence 6666555443
No 127
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=44.71 E-value=15 Score=32.50 Aligned_cols=41 Identities=5% Similarity=-0.165 Sum_probs=29.6
Q ss_pred cccEEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 90 FGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 90 ~G~~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
.+.+..+.+|+.+|||..|.. .++ .+|+|++|++++++...
T Consensus 59 ~~~~~~~~~~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~ 99 (449)
T 3qgu_A 59 RKAHQEKNPDAKIISLGIGDT--TEP-LPKYIADAMAKAAAGLA 99 (449)
T ss_dssp HHHHHHHCTTCCCEECSSCCC--CCC-CCHHHHHHHHHHHHGGG
T ss_pred HHHHHhhCCCCCEEEeeCCCC--CCC-CCHHHHHHHHHHHHhhc
Confidence 333343457999999998853 333 68999999999988643
No 128
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=44.69 E-value=7.5 Score=33.23 Aligned_cols=38 Identities=3% Similarity=-0.035 Sum_probs=22.4
Q ss_pred eeeecceEEecc-ccchhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVD-GNHILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~-g~a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.. ++.++||.++. . -.+.+|.|.+|+.+
T Consensus 10 ~~~~g~~~~d~~~~~~~i~l~~~~--~-~~~~~~~v~~a~~~ 48 (383)
T 3kax_A 10 RRGTHSIKWDTYKNEELIHAWIAD--M-DFEVPQPIQTALKK 48 (383)
T ss_dssp ---------CCCSSSCCEECCCSS--C-SSCCCHHHHHHHHH
T ss_pred ccCCCceeeeccCCCCeeeccccc--C-CCCCCHHHHHHHHH
Confidence 578999999955 57999998773 3 33589999999987
No 129
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=44.63 E-value=12 Score=32.69 Aligned_cols=35 Identities=3% Similarity=-0.011 Sum_probs=26.7
Q ss_pred CCCCEEEeccCCcccc-cCCCChHHHHHHhhcccccc
Q psy237 97 VDGNHILDVYTQISSV-PLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~-~lGh~hP~V~~Ai~~q~~~~ 132 (236)
.+|+.+|||..|..+. .++ .+|++.+++.+++...
T Consensus 35 ~~g~~~i~l~~~~~~~~~~~-~~~~v~~a~~~~~~~~ 70 (406)
T 1xi9_A 35 KKGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCKAIKEG 70 (406)
T ss_dssp HTTCCCEECCCCCGGGTTCC-CCHHHHHHHHHHHHTT
T ss_pred HcCCCEEEecCCCCCcCCCC-CCHHHHHHHHHHHhcC
Confidence 3688999998886532 566 4799999999888653
No 130
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=42.21 E-value=4.8 Score=34.92 Aligned_cols=31 Identities=10% Similarity=-0.037 Sum_probs=24.0
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhcccccc
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATVK 132 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~ 132 (236)
|+.+|||..|. +....+|+|.+|+.++++..
T Consensus 34 ~~~~i~l~~~~---~~~~~~~~v~~a~~~~~~~~ 64 (398)
T 3ele_A 34 KENVYDFSIGN---PSIPAPQIVNDTIKELVTDY 64 (398)
T ss_dssp GGGCEECCSCC---CCSCCCHHHHHHHHHHHHHS
T ss_pred CCCeEEeecCC---CCCCCCHHHHHHHHHHHhcC
Confidence 56789998873 23347999999999998763
No 131
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=42.18 E-value=13 Score=33.18 Aligned_cols=81 Identities=6% Similarity=-0.022 Sum_probs=43.9
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCC-CCCChhhhhHhhhhhccCceeeeeeeeeeecce
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVF-PSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNY 176 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~-~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~s 176 (236)
.|+.+|||..|.. .++ .+|.|.+|+.++++.... + .+... -..++.+.+++.+....+. ..-.+ .+..+++
T Consensus 55 ~~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~-~--~Y~~~~g~~~lr~~ia~~l~~~~g~-~~~~~-~v~~t~G 126 (447)
T 3b46_A 55 QGRELINLGQGFF--SYS-PPQFAIKEAQKALDIPMV-N--QYSPTRGRPSLINSLIKLYSPIYNT-ELKAE-NVTVTTG 126 (447)
T ss_dssp TTSCCEECCCCSC--SSC-CCHHHHHHHHHHTTSGGG-G--SCCCTTCCHHHHHHHHHHHTTTTTS-CCCGG-GEEEESH
T ss_pred cCCCeEEccCCCC--CCC-CCHHHHHHHHHHHhCcCC-C--CCCCCCCCHHHHHHHHHHHHHhcCC-CCChh-hEEEeCC
Confidence 4677999988864 455 789999999999875211 1 12111 1235566666644322221 00001 2455566
Q ss_pred EEeccccchh
Q psy237 177 LVDVDGNHIL 186 (236)
Q Consensus 177 gsDA~g~a~l 186 (236)
++++...++.
T Consensus 127 ~~~al~~~~~ 136 (447)
T 3b46_A 127 ANEGILSCLM 136 (447)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6665554433
No 132
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=42.12 E-value=6.4 Score=34.91 Aligned_cols=84 Identities=5% Similarity=-0.095 Sum_probs=45.9
Q ss_pred EeCCCCEEEeccCCccc-ccCCCChHHHHHHhhccccccccccCCCC-CCCCCCChhhhhHhhhhhccCceeeeeeeeee
Q psy237 95 VDVDGNHILDVYTQISS-VPLGYNHPALLKIFDDPATVKTFVNRPAL-GVFPSGDWPQLLENVLLKQSGSVSLFVDYQKS 172 (236)
Q Consensus 95 ~D~dG~~yLD~~~g~~~-~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~-~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~ 172 (236)
.+.+|+.+|||..|... .+-...+|+|.+|+.++++.... + .+ ...-..++.+.+++.+... +.... ...+.
T Consensus 49 ~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~-~--~y~~~~g~~~lr~~la~~~~~~--~~~~~-~~~v~ 122 (427)
T 3dyd_A 49 KPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKY-N--GYAPSIGFLSSREEIASYYHCP--EAPLE-AKDVI 122 (427)
T ss_dssp CCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCS-S--SCCCTTCCHHHHHHHHHHHCBT--TBCCC-GGGEE
T ss_pred cccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcC-C--CCCCCCCcHHHHHHHHHHHhhc--CCCCC-hHHEE
Confidence 34578899999888632 12347889999999998875321 1 12 1222335556666533111 11000 01355
Q ss_pred ecceEEeccccc
Q psy237 173 FGNYLVDVDGNH 184 (236)
Q Consensus 173 ~G~sgsDA~g~a 184 (236)
++++++++....
T Consensus 123 ~t~g~t~al~~~ 134 (427)
T 3dyd_A 123 LTSGCSQAIDLC 134 (427)
T ss_dssp EESSHHHHHHHH
T ss_pred EecCcHHHHHHH
Confidence 666666665543
No 133
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=41.65 E-value=18 Score=30.76 Aligned_cols=69 Identities=12% Similarity=0.088 Sum_probs=40.2
Q ss_pred CEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEe
Q psy237 100 NHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVD 179 (236)
Q Consensus 100 ~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsD 179 (236)
+.+|||.++.. .++ .+|+|++|+.++++... .++.....++.+.+++.+ ...+ + ...+++++++
T Consensus 30 ~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~-----~y~~~~~~~lr~~la~~~-~~~~------~-~v~~~~g~~~ 93 (365)
T 3get_A 30 KEVIKLASNEN--PFG-TPPKAIECLRQNANKAH-----LYPDDSMIELKSTLAQKY-KVQN------E-NIIIGAGSDQ 93 (365)
T ss_dssp SCCEECSSCCC--TTC-SCHHHHHHHHHHGGGTT-----SCCCTTCHHHHHHHHHHH-TCCG------G-GEEEESSHHH
T ss_pred CceEEecCCCC--CCC-CCHHHHHHHHHHHHhhc-----cCCCCChHHHHHHHHHHh-CCCc------c-eEEECCCHHH
Confidence 67899988754 356 78999999999887432 222222345555555522 1111 1 2455566666
Q ss_pred ccccc
Q psy237 180 VDGNH 184 (236)
Q Consensus 180 A~g~a 184 (236)
+....
T Consensus 94 a~~~~ 98 (365)
T 3get_A 94 VIEFA 98 (365)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 134
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=41.09 E-value=15 Score=31.30 Aligned_cols=78 Identities=13% Similarity=-0.000 Sum_probs=45.9
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecce
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNY 176 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~s 176 (236)
.+|+.+|||.++.. .++ .+|+|++|+.++++...... ..++.....++.+.+++.+ ...+ + ...++++
T Consensus 23 ~~~~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~-~~y~~~~~~~lr~~la~~~-g~~~------~-~i~~t~g 90 (360)
T 3hdo_A 23 PDIASWIKLNTNEN--PYP-PSPEVVKAILEELGPDGAAL-RIYPSASSQKLREVAGELY-GFDP------S-WIIMANG 90 (360)
T ss_dssp SCCTTSEECSSCCC--SSC-CCHHHHHHHHHHHTTTCGGG-GSCCCSSCHHHHHHHHHHH-TCCG------G-GEEEESS
T ss_pred ccccceeeccCCCC--CCC-CCHHHHHHHHHHHhcccchh-hcCCCCchHHHHHHHHHHh-CcCc------c-eEEEcCC
Confidence 57889999988764 343 78999999999987631100 1222222345555555532 1111 1 3566677
Q ss_pred EEeccccchh
Q psy237 177 LVDVDGNHIL 186 (236)
Q Consensus 177 gsDA~g~a~l 186 (236)
++++....+.
T Consensus 91 ~~~al~~~~~ 100 (360)
T 3hdo_A 91 SDEVLNNLIR 100 (360)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777665544
No 135
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=41.04 E-value=9.8 Score=32.40 Aligned_cols=71 Identities=8% Similarity=0.026 Sum_probs=39.8
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEE
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLV 178 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgs 178 (236)
++.+|||.++.. .++ .+|+|.+|+.++++.... ++.....++.+.+++.+ ...+ + ...++++++
T Consensus 31 ~~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~-----y~~~~~~~lr~~la~~~-~~~~------~-~v~~~~g~t 94 (363)
T 3ffh_A 31 LTKITKLSSNEN--PLG-TSKKVAAIQANSSVETEI-----YPDGWASSLRKEVADFY-QLEE------E-ELIFTAGVD 94 (363)
T ss_dssp CSCCEECSSCSC--TTC-CCHHHHHHHHTCBSCCCB-----C----CHHHHHHHHHHH-TCCG------G-GEEEESSHH
T ss_pred CCceEEccCCCC--CCC-CCHHHHHHHHHHHHHhhc-----CCCcchHHHHHHHHHHh-CCCh------h-hEEEeCCHH
Confidence 357899888754 454 789999999998865322 22223345555555522 1111 1 245566666
Q ss_pred eccccch
Q psy237 179 DVDGNHI 185 (236)
Q Consensus 179 DA~g~a~ 185 (236)
++....+
T Consensus 95 ~a~~~~~ 101 (363)
T 3ffh_A 95 ELIELLT 101 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6655443
No 136
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=37.03 E-value=9.9 Score=32.25 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=20.2
Q ss_pred eeecceEEeccccchhhhhccccccccCCCCHHHHHhhhcCc
Q psy237 171 KSFGNYLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPA 212 (236)
Q Consensus 171 ~~~G~sgsDA~g~a~lD~~sg~~~~~lGh~~p~i~~A~~~~~ 212 (236)
.+.|..+++.+|+.++||.++.. .++ .+|++.+|+.+..
T Consensus 3 ~~~g~~~~~~~g~~~id~~~~~~--~~~-~~~~v~~a~~~~~ 41 (350)
T 3fkd_A 3 FGHGDEGITPLSSEIVNFSTTVW--TDG-DKDHLEKHLVENL 41 (350)
T ss_dssp -------------CCEECSCCSC--CCS-CCHHHHHHHHHTG
T ss_pred ccccchHhhhccccEEEccCCCC--CCC-CCHHHHHHHHHhH
Confidence 46777889999999999988763 444 7899999998743
No 137
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=36.57 E-value=12 Score=33.08 Aligned_cols=39 Identities=10% Similarity=-0.056 Sum_probs=32.8
Q ss_pred EEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccccccc
Q psy237 94 LVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKTF 134 (236)
Q Consensus 94 l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~ 134 (236)
.||.++|.+.++..|.+...++ ++.+.+++.++.....+
T Consensus 30 ~y~~~~~p~~~i~lg~~~~~~~--~~~~~~~~~~~~~~~~~ 68 (435)
T 3piu_A 30 PYHEVHNTNGIIQMGLAENQLC--FDLLESWLAKNPEAAAF 68 (435)
T ss_dssp BCBTTTBTTSBEECSSCCCCSS--HHHHHHHHHHCTTGGGT
T ss_pred CCCcccCCCCeEEecccccccc--HHHHHHHHHhCcccccc
Confidence 3899999999988888888777 89999999998876543
No 138
>1gff_3 Bacteriophage G4 capsid proteins GPF, GPG, GPJ; coat protein, icosahedral virus; 3.00A {Enterobacteria phage G4}
Probab=36.55 E-value=15 Score=19.93 Aligned_cols=16 Identities=38% Similarity=0.320 Sum_probs=13.4
Q ss_pred ecccccEEEeCCCCEE
Q psy237 87 QKSFGNYLVDVDGNHI 102 (236)
Q Consensus 87 ~~a~G~~l~D~dG~~y 102 (236)
.+.+|++||-+-|..|
T Consensus 10 ~r~kgarlwyvggtq~ 25 (26)
T 1gff_3 10 GKSKGARLWYVGGTQY 25 (26)
T ss_pred CCCCceEEEEecceec
Confidence 4789999999988765
No 139
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=33.89 E-value=25 Score=30.73 Aligned_cols=38 Identities=5% Similarity=-0.035 Sum_probs=28.6
Q ss_pred EEEeCCCCEEEeccCCcccccCCCChHHHHHHhhccccccc
Q psy237 93 YLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPATVKT 133 (236)
Q Consensus 93 ~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~ 133 (236)
...+.+|+.+|||..|-. .-..+|.|++|+++++++..
T Consensus 49 ~~~~~~~~~~i~l~~~~~---~~~~~~~v~~a~~~~~~~~~ 86 (432)
T 3ei9_A 49 HLLKYPDAQVISLGIGDT---TEPIPEVITSAMAKKAHELS 86 (432)
T ss_dssp HHHHCTTCCCEECSSCCC---CSCCCHHHHHHHHHHHHHTT
T ss_pred hhhcCCCCCeEEccCCCC---CCCCCHHHHHHHHHHHhccc
Confidence 334456889999988843 34789999999999988643
No 140
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=33.70 E-value=18 Score=31.55 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=26.2
Q ss_pred CCCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 97 VDGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 97 ~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
..|+++|||.+|.. .+| .+|+|.+++.++++.
T Consensus 44 ~~g~~~idl~~g~~--~~~-~~~~v~~a~~~~~~~ 75 (404)
T 2o1b_A 44 HGPLPLINMAVGIP--DGP-TPQGIIDHFQKALTI 75 (404)
T ss_dssp CCSSCCEECCCCSC--SSC-CCHHHHHHHHHHTTC
T ss_pred cCCCCEEecCCcCC--CCC-CCHHHHHHHHHHHhC
Confidence 35888999988865 577 589999999998865
No 141
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=32.50 E-value=5.4 Score=34.55 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=28.9
Q ss_pred eeeecceEEecccc-------chhhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGN-------HILDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~-------a~lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.+|+ .++||.++. ..++ .+|.|.+|+.+
T Consensus 11 ~~~~g~~~~d~~g~~~g~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~ 55 (399)
T 1c7n_A 11 RKNLGSLKWDLMYSQNPEVGNEVVPLSVAD--MEFK-NPPELIEGLKK 55 (399)
T ss_dssp CTTTTBHHHHHHHHHCTTCCTTCCCCCSSS--CSSC-CCHHHHHHHHH
T ss_pred ccCCCccccccchhhccccCCCceeeeecC--CCCC-CCHHHHHHHHH
Confidence 46889999999885 677885553 4455 57899999887
No 142
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=30.55 E-value=3.8 Score=35.67 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=18.0
Q ss_pred EeccCCcccccCCCChHHHHHHhhccccc
Q psy237 103 LDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 103 LD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.|++..+++.+ +.||+|++|+.+++..
T Consensus 30 ~~~~~~~~~~n--~~~~~v~~a~~~~~~~ 56 (420)
T 3gbx_A 30 EEHIELIASEN--YTSPRVMQAQGSQLTN 56 (420)
T ss_dssp HHSEECCTTCC--CCCHHHHHHHTSGGGG
T ss_pred hcceeeeccCC--CCCHHHHHHHHHHHhc
Confidence 34444444443 4799999999999853
No 143
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=30.48 E-value=20 Score=30.68 Aligned_cols=31 Identities=3% Similarity=0.052 Sum_probs=25.1
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
+|+.+|||.+|.. .+| .+|+|.+++.++++.
T Consensus 28 ~g~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~ 58 (388)
T 1j32_A 28 EGIDVCSFSAGEP--DFN-TPKHIVEAAKAALEQ 58 (388)
T ss_dssp TTCCCEECCCSSC--SSC-CCHHHHHHHHHHHHT
T ss_pred cCCCEEECCCCCC--CCC-CCHHHHHHHHHHHhc
Confidence 6889999988864 466 589999999988764
No 144
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=30.03 E-value=16 Score=31.64 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=28.0
Q ss_pred EEEeCCCCEEEeccCCcccccCCCChHHHHHHhhcccc
Q psy237 93 YLVDVDGNHILDVYTQISSVPLGYNHPALLKIFDDPAT 130 (236)
Q Consensus 93 ~l~D~dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~ 130 (236)
.++|.|++.+.|+...++..+++|..++..+.+.+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~ 42 (379)
T 3ke3_A 5 LRQDIDPNGLLEYSVVYTDRALNHMSKAFQEVMNDLLS 42 (379)
T ss_dssp ---CCSTTSCCCCCSSCCTTSCCTTSHHHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Confidence 57899999999999888888899999876665444433
No 145
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=29.99 E-value=22 Score=30.67 Aligned_cols=31 Identities=3% Similarity=0.004 Sum_probs=25.1
Q ss_pred CCCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 98 DGNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.|+.+|||.+|.. .+|+ +|.|.+++.+++..
T Consensus 39 ~g~~~i~l~~~~~--~~~~-~~~v~~a~~~~~~~ 69 (389)
T 1o4s_A 39 KGEDVINLTAGEP--DFPT-PEPVVEEAVRFLQK 69 (389)
T ss_dssp TTCCCEECCCSSC--SSCC-CHHHHHHHHHHHTT
T ss_pred cCCCEEEccCCCC--CCCC-CHHHHHHHHHHHhc
Confidence 5788999988764 5676 79999999998865
No 146
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=28.46 E-value=35 Score=29.70 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=22.9
Q ss_pred EEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 101 HILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 101 ~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.+|||..|.. .+| .+|+|.+|+.++++.
T Consensus 38 ~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~ 65 (429)
T 1yiz_A 38 KPLNLGQGFP--DYH-APKYALNALAAAANS 65 (429)
T ss_dssp CCEECCSSSC--SSC-CCHHHHHHHHHHHTC
T ss_pred CEEEecCCCC--CCC-CCHHHHHHHHHHHhc
Confidence 4789888764 567 689999999999876
No 147
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=27.64 E-value=9.3 Score=32.72 Aligned_cols=38 Identities=5% Similarity=-0.066 Sum_probs=29.2
Q ss_pred eeeecceEEeccccch-----hhhhccccccccCCCCHHHHHhhhc
Q psy237 170 QKSFGNYLVDVDGNHI-----LDVYTQISSVPLGYNHPALLKIFDD 210 (236)
Q Consensus 170 ~~~~G~sgsDA~g~a~-----lD~~sg~~~~~lGh~~p~i~~A~~~ 210 (236)
+++.|++.||.+|++| +||.++ .+..+.+|+|.+|+.+
T Consensus 14 ~~~~g~~~~d~~~~~~~~~~~i~l~~~---~~~~~~~~~v~~a~~~ 56 (391)
T 4dq6_A 14 RSNNFSSKWSEMEKKYGTNDLLPMWVA---DMDFKAAPCIIDSLKN 56 (391)
T ss_dssp CTTTTBHHHHCHHHHHSCSCSEECCSS---SCSSCCCHHHHHHHHH
T ss_pred cccCCceeeeecccccCCCCceecccc---CCCCCCCHHHHHHHHH
Confidence 4678899999998877 566554 3445678999999987
No 148
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=26.13 E-value=26 Score=29.97 Aligned_cols=27 Identities=11% Similarity=0.057 Sum_probs=21.8
Q ss_pred EEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 102 ILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 102 yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
+|||..|.. .++ .+|.|.+++.++++.
T Consensus 27 ~i~l~~~~~--~~~-~~~~v~~a~~~~~~~ 53 (381)
T 1v2d_A 27 AVNLGQGFP--SNP-PPPFLLEAVRRALGR 53 (381)
T ss_dssp CEECCCCSC--SSC-CCHHHHHHHHHHTTT
T ss_pred eEEecCCCC--CCC-CCHHHHHHHHHHHHH
Confidence 689888764 456 789999999998875
No 149
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=25.63 E-value=43 Score=17.79 Aligned_cols=17 Identities=18% Similarity=0.231 Sum_probs=13.2
Q ss_pred ccccEEEeCCCCEEEec
Q psy237 89 SFGNYLVDVDGNHILDV 105 (236)
Q Consensus 89 a~G~~l~D~dG~~yLD~ 105 (236)
..-+.|||.+|+.+-.+
T Consensus 4 ~~ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 4 TTSSKIYDNKNQLIADL 20 (26)
T ss_pred CCCCEEEeCCCCEeeec
Confidence 34578999999987765
No 150
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=25.31 E-value=27 Score=29.22 Aligned_cols=69 Identities=6% Similarity=-0.055 Sum_probs=36.8
Q ss_pred EEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEecc
Q psy237 102 ILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVDVD 181 (236)
Q Consensus 102 yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsDA~ 181 (236)
++||-++ ..|+.+|+|.+|+.+++.... . . .-..++.+.+++.+....+..+ + ...++++++++.
T Consensus 15 ~i~l~~~----~~~~~~~~v~~a~~~~~~~~~--~--~---~g~~~~~~~~~~~l~~~~g~~~---~-~v~~~~g~t~a~ 79 (359)
T 1svv_A 15 PYSFVND----YSVGMHPKILDLMARDNMTQH--A--G---YGQDSHCAKAARLIGELLERPD---A-DVHFISGGTQTN 79 (359)
T ss_dssp CEECSCS----CSSCCCHHHHHHHHHHTTCCC--C--S---TTCSHHHHHHHHHHHHHHTCTT---S-EEEEESCHHHHH
T ss_pred eEEecCC----CcCCCCHHHHHHHHHHHhhcc--c--c---ccccHHHHHHHHHHHHHhCCCC---c-cEEEeCCchHHH
Confidence 4555442 257999999999999886421 1 1 1123344555544433332111 1 245566677766
Q ss_pred ccch
Q psy237 182 GNHI 185 (236)
Q Consensus 182 g~a~ 185 (236)
..++
T Consensus 80 ~~~~ 83 (359)
T 1svv_A 80 LIAC 83 (359)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 151
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=24.77 E-value=51 Score=28.37 Aligned_cols=32 Identities=9% Similarity=-0.050 Sum_probs=23.9
Q ss_pred CCCEEEeccCCcccccCCCCh--HHHHHHhhccc
Q psy237 98 DGNHILDVYTQISSVPLGYNH--PALLKIFDDPA 129 (236)
Q Consensus 98 dG~~yLD~~~g~~~~~lGh~h--P~V~~Ai~~q~ 129 (236)
+|+.++||..|......||.. |.|.+|+.+++
T Consensus 28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~ 61 (412)
T 1ajs_A 28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIA 61 (412)
T ss_dssp CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHH
T ss_pred CCCCceeeccceecCCCCCccccHHHHHHHHHhh
Confidence 467789998887544555544 99999998887
No 152
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=24.35 E-value=26 Score=31.32 Aligned_cols=32 Identities=6% Similarity=0.100 Sum_probs=25.9
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
+..+|||.+|.... -++.+++|.+++.++++.
T Consensus 75 ~~~~i~l~~g~p~~-~~~p~~~v~~a~~~~l~~ 106 (448)
T 3aow_A 75 TSDIISLAGGLPNP-KTFPKEIIRDILVEIMEK 106 (448)
T ss_dssp TSSSEECCCCCCCG-GGSCHHHHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCc-hhCCHHHHHHHHHHHHHh
Confidence 45689999988654 468999999999998875
No 153
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=24.11 E-value=47 Score=27.79 Aligned_cols=96 Identities=9% Similarity=-0.096 Sum_probs=50.8
Q ss_pred CEEEeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhhhhhccCceeeeeeeeeeecceEEe
Q psy237 100 NHILDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENVLLKQSGSVSLFVDYQKSFGNYLVD 179 (236)
Q Consensus 100 ~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~Ll~~ap~~~~~i~~~~~~G~sgsD 179 (236)
.+++||.++.. .++ .+|+|.+|+.+++.+... + .++.....++.+.+++.+-.. +-.+ + ...+++++++
T Consensus 19 ~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~-~--~y~~~~~~~lr~~la~~~~~~-~~~~---~-~v~~~~G~~~ 87 (335)
T 1uu1_A 19 RDKTYLALNEN--PFP-FPEDLVDEVFRRLNSDAL-R--IYYDSPDEELIEKILSYLDTD-FLSK---N-NVSVGNGADE 87 (335)
T ss_dssp CCSEEESSCCC--SSC-CCHHHHHHHHHTCCGGGG-G--SCCCSSCHHHHHHHHHHHTCS-SCCG---G-GEEEESSHHH
T ss_pred CcceECCCCCC--CCC-CCHHHHHHHHHHhhhhhh-h--cCCCCchHHHHHHHHHHcCCC-CCCH---H-HEEEcCChHH
Confidence 46789887754 355 689999999998843221 1 222222334555555532100 0011 1 3566677777
Q ss_pred ccccchhhhhccccccccCCCCHHHHHhhh
Q psy237 180 VDGNHILDVYTQISSVPLGYNHPALLKIFD 209 (236)
Q Consensus 180 A~g~a~lD~~sg~~~~~lGh~~p~i~~A~~ 209 (236)
+....+.-+ |=.+... .+++....++.
T Consensus 88 al~~~~~~~--gd~Vl~~-p~y~~~~~~~~ 114 (335)
T 1uu1_A 88 IIYVMMLMF--DRSVFFP-PTYSCYRIFAK 114 (335)
T ss_dssp HHHHHHHHS--SEEEECS-SSCHHHHHHHH
T ss_pred HHHHHHHHh--CCcEEEC-CCcHHHHHHHH
Confidence 776554433 4334444 55555555543
No 154
>1m06_J J protein, small core protein; bacteriophage, virion; HET: 3DR; 3.50A {Enterobacteria phage ALPHA3}
Probab=22.27 E-value=13 Score=20.20 Aligned_cols=17 Identities=24% Similarity=0.301 Sum_probs=13.2
Q ss_pred ecccccEEEeCCCCEEE
Q psy237 87 QKSFGNYLVDVDGNHIL 103 (236)
Q Consensus 87 ~~a~G~~l~D~dG~~yL 103 (236)
.+.+|++||-+-|..|.
T Consensus 9 ~r~kgarlwyvggtq~~ 25 (26)
T 1m06_J 9 SRRKGARLWYVGGSQFX 25 (26)
T ss_dssp CCCSSSCCCCSSSCCC-
T ss_pred CcCCceEEEEEcceEec
Confidence 47899999998887653
No 155
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=22.12 E-value=12 Score=31.81 Aligned_cols=25 Identities=12% Similarity=-0.033 Sum_probs=20.1
Q ss_pred EEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 101 HILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 101 ~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
.|||+.++ |+.+|+|++|+.+++..
T Consensus 2 ~yld~~~~------~~~~~~v~~a~~~~~~~ 26 (382)
T 4eb5_A 2 AYFDYTSA------KPVDERILEAMLPYMTE 26 (382)
T ss_dssp CBCBTTTC------CCCCHHHHHHHHHHHHT
T ss_pred eeeccCCC------CCCCHHHHHHHHHHHHh
Confidence 37886654 68999999999998875
No 156
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=22.06 E-value=57 Score=27.69 Aligned_cols=49 Identities=10% Similarity=-0.046 Sum_probs=30.3
Q ss_pred EeccCCcccccCCCChHHHHHHhhccccccccccCCCCCCCCCCChhhhhHhh
Q psy237 103 LDVYTQISSVPLGYNHPALLKIFDDPATVKTFVNRPALGVFPSGDWPQLLENV 155 (236)
Q Consensus 103 LD~~~g~~~~~lGh~hP~V~~Ai~~q~~~~~~~~~~~~~~~~~~elAE~Lae~ 155 (236)
|||.+|.. .+| .+|+|.+++.+++++.... ...+......++.+.+++.
T Consensus 33 idl~~~~~--~~~-~~~~v~~a~~~~~~~~~~~-~~~y~~~~~~~l~~~la~~ 81 (369)
T 3cq5_A 33 IRLNTNEN--PYP-PSEALVADLVATVDKIATE-LNRYPERDAVELRDELAAY 81 (369)
T ss_dssp EECSSCCC--CSC-CCHHHHHHHHHHHHHHGGG-TTSCCCTTCHHHHHHHHHH
T ss_pred eeccCCCC--CCC-CCHHHHHHHHHHHHhcccc-cccCCCccHHHHHHHHHHh
Confidence 89888765 566 7899999999998763211 1123232233555555553
No 157
>1q87_A 39 kDa initiator binding protein; INR, core promoter, DNA binding protein; 2.32A {Trichomonas vaginalis} SCOP: e.47.1.1 PDB: 1q88_A 1q89_A
Probab=21.67 E-value=31 Score=28.66 Aligned_cols=17 Identities=29% Similarity=0.614 Sum_probs=15.2
Q ss_pred eecccccEEEeCCCCEE
Q psy237 86 YQKSFGNYLVDVDGNHI 102 (236)
Q Consensus 86 i~~a~G~~l~D~dG~~y 102 (236)
+.++.|.||.|++|++|
T Consensus 174 ~i~s~~~YLvDEng~~f 190 (221)
T 1q87_A 174 LIEATGQYLMDENGEKY 190 (221)
T ss_dssp TSCTTSCCEECTTCCEE
T ss_pred ccCCCcceeEcCCCcch
Confidence 56899999999999986
No 158
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=21.42 E-value=38 Score=28.67 Aligned_cols=30 Identities=13% Similarity=0.071 Sum_probs=23.6
Q ss_pred CCEEEeccCCcccccCCCChHHHHHHhhccccc
Q psy237 99 GNHILDVYTQISSVPLGYNHPALLKIFDDPATV 131 (236)
Q Consensus 99 G~~yLD~~~g~~~~~lGh~hP~V~~Ai~~q~~~ 131 (236)
++.+|||.++. ..+ ..+|+|.+|+.+++..
T Consensus 29 ~~~~i~l~~~~--~~~-~~~~~v~~a~~~~~~~ 58 (367)
T 3euc_A 29 SHGLVKLDAME--NPY-RLPPALRSELAARLGE 58 (367)
T ss_dssp CTTCEECCSSC--CCC-CCCHHHHHHHHHHHHH
T ss_pred CCCeeEccCCC--CCC-CCCHHHHHHHHHHhhh
Confidence 46789998876 334 4789999999998875
Done!