Your job contains 1 sequence.
>psy2371
MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS
ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS
GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF
GFDYLRDNMVFNSNDRVQRKLNFVILDEIDSILIDEARTPLIISGEIKNNAQYFYKIINP
IPKLLVPEIDTKNIKKNIKYTKKNTGDYIIDYETNQVFLTENGYEKYENILIKMALRAHV
LYHKNKHYIIKNNKIIIVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITFQ
NYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQAI
LMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGHPK
MITIATNMAGRGTDIILGGNIDSYIKDIKKNISSEVKKKNKIKKLKNEWMLLHDKVISSG
GLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFYLSLDDSLLKFFSSDQIKIVMEKLKI
PKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKLLESKNI
SEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELILKKEFKLDISFKIFFKKKYTIKD
FFIKILYTFDKKYENKIKILNNKKFLNFERNIILQSIDKYWIEHLLSLDQLRQGINLRSY
AQKDPKREYKREAFKLFHKMLNLIKYEAIKKIMTIL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2371
(816 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|SO_4211 - symbol:SO_4211 "preprotein translocase... 1722 1.6e-195 2
UNIPROTKB|Q9KPH4 - symbol:secA "Protein translocase subun... 1024 1.5e-194 3
TIGR_CMR|VC_2394 - symbol:VC_2394 "preprotein translocase... 1024 1.5e-194 3
TIGR_CMR|CBU_0147 - symbol:CBU_0147 "preprotein transloca... 988 6.5e-194 3
UNIPROTKB|P10408 - symbol:secA species:83333 "Escherichia... 1665 3.9e-190 2
TIGR_CMR|CPS_4454 - symbol:CPS_4454 "preprotein transloca... 1705 1.6e-175 1
TIGR_CMR|ECH_1149 - symbol:ECH_1149 "preprotein transloca... 1556 6.7e-173 2
TIGR_CMR|CHY_0162 - symbol:CHY_0162 "preprotein transloca... 1531 6.0e-172 2
TIGR_CMR|CJE_1020 - symbol:CJE_1020 "preprotein transloca... 1186 8.3e-169 3
NCBI_NP|NP_357091.2 - symbol:secA "preprotein translocase... 1479 1.2e-166 2
TIGR_CMR|BA_5421 - symbol:BA_5421 "preprotein translocase... 1176 4.1e-165 3
TIGR_CMR|APH_1178 - symbol:APH_1178 "preprotein transloca... 1447 3.2e-162 2
TIGR_CMR|NSE_0232 - symbol:NSE_0232 "preprotein transloca... 1474 2.2e-161 2
TIGR_CMR|SPO_0057 - symbol:SPO_0057 "preprotein transloca... 1431 4.2e-160 2
UNIPROTKB|P0A5Y8 - symbol:secA1 "Protein translocase subu... 1382 2.4e-155 2
TIGR_CMR|GSU_2050 - symbol:GSU_2050 "preprotein transloca... 1333 1.5e-153 2
TIGR_CMR|DET_0434 - symbol:DET_0434 "preprotein transloca... 864 3.8e-152 5
UNIPROTKB|Q7WWK0 - symbol:secA "Protein translocase subun... 1071 1.8e-150 3
TIGR_CMR|BA_0882 - symbol:BA_0882 "preprotein translocase... 1049 2.4e-142 3
UNIPROTKB|Q7WUF6 - symbol:secA2 "Protein translocase subu... 852 5.1e-112 3
UNIPROTKB|Q3S2Y3 - symbol:secA2 "Protein translocase subu... 848 7.2e-109 3
UNIPROTKB|P66785 - symbol:secA2 "Protein translocase subu... 672 2.1e-93 3
UNIPROTKB|Q5LPY3 - symbol:secA2 "Protein translocase subu... 603 2.9e-72 2
TIGR_CMR|SPO_2713 - symbol:SPO_2713 "SecA DEAD domain pro... 603 2.9e-72 2
DICTYBASE|DDB_G0291406 - symbol:DDB_G0291406 species:4468... 292 4.3e-31 5
>TIGR_CMR|SO_4211 [details] [associations]
symbol:SO_4211 "preprotein translocase, SecA subunit"
species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0008565 "protein transporter activity"
evidence=ISS] [GO:0009306 "protein secretion" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 RefSeq:NP_719739.1
ProteinModelPortal:Q8E9Q5 SMR:Q8E9Q5 PRIDE:Q8E9Q5 GeneID:1171815
KEGG:son:SO_4211 PATRIC:23528060 ProtClustDB:PRK13107
Uniprot:Q8E9Q5
Length = 908
Score = 1722 (611.2 bits), Expect = 1.6e-195, Sum P(2) = 1.6e-195
Identities = 356/721 (49%), Positives = 479/721 (66%)
Query: 4 LTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILP 63
LTK+FGSRN R LK QK+V KIN LE+ +KL+DE+L+ +T++ ++ + +G +LDSI+
Sbjct: 6 LTKVFGSRNDRTLKGLQKVVNKINALEADYEKLTDEQLKAKTAEFRERLAAGASLDSIMA 65
Query: 64 KAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQG 123
+AF+ REASKRV +MRHFDVQL+GG+ L I+EM+TGEGKTL ATL AYLN+L+G+G
Sbjct: 66 EAFATVREASKRVFEMRHFDVQLLGGMVLDSNRIAEMRTGEGKTLTATLPAYLNALTGKG 125
Query: 124 VHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFGFD 183
VH++T++DYLA+RDAE L+ +LGL++G+N + + KK +Y ADITYGTNNEFGFD
Sbjct: 126 VHVITVNDYLARRDAENNRPLFEFLGLTVGINVAGLGQQDKKDAYNADITYGTNNEFGFD 185
Query: 184 YLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPK 243
YLRDNM F+ +RVQR L++ ARTPLIISG +++++ + KI IP
Sbjct: 186 YLRDNMAFSPQERVQRPLHYALIDEVDSILIDEARTPLIISGAAEDSSELYIKINTLIPN 245
Query: 244 LLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIKM--------- 294
L+ + GDY ID + QV TE G EK EN+LI+
Sbjct: 246 LIRQDKEDSEEYVGE-------GDYTIDEKAKQVHFTERGQEKVENLLIERGMLAEGDSL 298
Query: 295 --------------ALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALE 340
ALRAH L VDE TGR M RRW+EGLHQA+E
Sbjct: 299 YSAANISLLHHVNAALRAHTLFERDVDYIVQDGEVIIVDEHTGRTMPGRRWSEGLHQAVE 358
Query: 341 AKENLEIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKIN 400
AKE + IQNE QTLASITFQNYFR+Y+K++GMTGTA+TEA+EFQ IY L+T+ VP N+
Sbjct: 359 AKEGVRIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFQHIYGLDTVVVPTNRPM 418
Query: 401 KRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSV 460
RKD+ D +Y T EKYQAI+ DIK+C + QPVLVGT SIE SELL+ ++ K +PH V
Sbjct: 419 VRKDMADLVYLTANEKYQAIIKDIKDCRERGQPVLVGTVSIEQSELLARLMVKEKIPHQV 478
Query: 461 LNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXX 520
LNAK H+ EA+I+AQAG +TIATNMAGRGTDI+LGGN + I
Sbjct: 479 LNAKFHEKEAEIVAQAGRTGAVTIATNMAGRGTDIVLGGNWNMEID------ALENPTPE 532
Query: 521 XXXXXXXXWMLLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXX 580
W L HD V+++GGLHI+GTERHESRRIDNQLRGR+GRQGD GSSR
Sbjct: 533 QKAKIKADWQLRHDAVVAAGGLHILGTERHESRRIDNQLRGRAGRQGDAGSSRFYLSMED 592
Query: 581 XXXXXXXXXQIKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIY 640
++ +M+KL + +G++IE S +IE+AQRK+E RNFDIRKQLLE+DD+
Sbjct: 593 SLMRIFASDRVSGMMKKLGMEEGEAIEHPWVSRAIENAQRKVEARNFDIRKQLLEFDDVA 652
Query: 641 NNQRKIICQERNKLLESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELILKK 700
N+QR+++ +RN+L+++++I++ I+ ++ DV+ + +YI + ++ WD+ GLE L +
Sbjct: 653 NDQRQVVYAQRNELMDAESIADTIQNIQDDVISAVIDQYIPPQSVEELWDVPGLEQRLHQ 712
Query: 701 E 701
E
Sbjct: 713 E 713
Score = 194 (73.4 bits), Expect = 1.6e-195, Sum P(2) = 1.6e-195
Identities = 33/64 (51%), Positives = 51/64 (79%)
Query: 752 IILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAIKK 811
++LQ++D W EHL ++D LRQGI+LR YAQK+PK+EYKRE+F+LF ++LN +K++ I
Sbjct: 766 VMLQTLDGLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFQQLLNTLKHDVISV 825
Query: 812 IMTI 815
+ +
Sbjct: 826 LSKV 829
>UNIPROTKB|Q9KPH4 [details] [associations]
symbol:secA "Protein translocase subunit SecA"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0009306 "protein secretion" evidence=ISS] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0009306 GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 HSSP:P43803
PIR:F82080 RefSeq:NP_232024.1 ProteinModelPortal:Q9KPH4 SMR:Q9KPH4
DNASU:2613063 GeneID:2613063 KEGG:vch:VC2394 PATRIC:20083809
Uniprot:Q9KPH4
Length = 903
Score = 1024 (365.5 bits), Expect = 1.5e-194, Sum P(3) = 1.5e-194
Identities = 214/411 (52%), Positives = 278/411 (67%)
Query: 292 IKMALRAHVLXXXXXXXXXX-XXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNE 350
+ ALRAHVL VDE TGR M RRW++GLHQA+EAKE ++IQNE
Sbjct: 310 VNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQNE 369
Query: 351 TQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIY 410
QTLASITFQNYFR+Y+K+SGMTGTA+TEA+EFQ+IY LET+ +P NK R D+ D +Y
Sbjct: 370 NQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVRNDMPDVVY 429
Query: 411 KTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEA 470
++ EK+ AI+ DIK K QPVLVGT SIE SELLSN LKK + H+VLNAK H+ EA
Sbjct: 430 RSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVLNAKFHEKEA 489
Query: 471 QIIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWM 530
+I+A+AG P +TIATNMAGRGTDI+LGG+ + ++ W
Sbjct: 490 EIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKAE------WK 543
Query: 531 LLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQ 590
+HD+V+ +GGLHIIGTERHESRRIDNQLRGRSGRQGD GSSR +
Sbjct: 544 QVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFTSDR 603
Query: 591 IKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQE 650
+ +++ + +G++IES + S SIE AQRK+E RNFDIRKQLLEYDD+ N+QRK++ +
Sbjct: 604 MAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVYEL 662
Query: 651 RNKLLESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELILKKE 701
R++L+ + +IS++I R DVL + +YI + + WDI GLE LK +
Sbjct: 663 RDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKND 713
Score = 715 (256.8 bits), Expect = 1.5e-194, Sum P(3) = 1.5e-194
Identities = 148/290 (51%), Positives = 191/290 (65%)
Query: 4 LTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILP 63
LTK+ GSRN R L++ +KIV++IN E + LSDEEL+ +T + +Q I GE LD +LP
Sbjct: 6 LTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENLDQLLP 65
Query: 64 KAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQG 123
+AF+ REASKRV MRHFDVQLIGG+ LH G I+EM+TGEGKTL ATLAAYLN+L G+G
Sbjct: 66 EAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNALPGKG 125
Query: 124 VHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFGFD 183
VHIVT++DYLAKRDAE L+ +LG+++GVN + KK++Y+ADI YGTNNEFGFD
Sbjct: 126 VHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNEFGFD 185
Query: 184 YLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPK 243
YLRDNM F DRVQR F ARTPLIISG ++++ + +I IP
Sbjct: 186 YLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINKLIPL 245
Query: 244 LLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIK 293
L + G + +D ++ QV LTE G E E +L+K
Sbjct: 246 LQKQDKEDSEEYRGD-------GHFTVDEKSKQVHLTETGQEFVEELLVK 288
Score = 184 (69.8 bits), Expect = 1.5e-194, Sum P(3) = 1.5e-194
Identities = 32/60 (53%), Positives = 48/60 (80%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
++++LQ++D W EHL ++D LRQGI+LR YAQK+PK+EYKRE+F+LF +L +K + I
Sbjct: 764 KSVMLQTLDTLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVI 823
Score = 40 (19.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 48 LKQSIHSGETLDSILPKAFSVCREASKRVLKMRHFDVQ 85
++ + GE ++S K S E ++R ++ R+FD++
Sbjct: 608 IQSGMDEGEAIES---KMLSRSIEKAQRKVEGRNFDIR 642
>TIGR_CMR|VC_2394 [details] [associations]
symbol:VC_2394 "preprotein translocase, SecA subunit"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009306 "protein
secretion" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009306
GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 HSSP:P43803
PIR:F82080 RefSeq:NP_232024.1 ProteinModelPortal:Q9KPH4 SMR:Q9KPH4
DNASU:2613063 GeneID:2613063 KEGG:vch:VC2394 PATRIC:20083809
Uniprot:Q9KPH4
Length = 903
Score = 1024 (365.5 bits), Expect = 1.5e-194, Sum P(3) = 1.5e-194
Identities = 214/411 (52%), Positives = 278/411 (67%)
Query: 292 IKMALRAHVLXXXXXXXXXX-XXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNE 350
+ ALRAHVL VDE TGR M RRW++GLHQA+EAKE ++IQNE
Sbjct: 310 VNAALRAHVLFEKNVDYIVTPDGEVVIVDEHTGRTMPGRRWSDGLHQAVEAKEGVKIQNE 369
Query: 351 TQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIY 410
QTLASITFQNYFR+Y+K+SGMTGTA+TEA+EFQ+IY LET+ +P NK R D+ D +Y
Sbjct: 370 NQTLASITFQNYFRLYEKLSGMTGTADTEAFEFQQIYGLETVVIPTNKPMVRNDMPDVVY 429
Query: 411 KTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEA 470
++ EK+ AI+ DIK K QPVLVGT SIE SELLSN LKK + H+VLNAK H+ EA
Sbjct: 430 RSEAEKFAAIIEDIKQRVEKGQPVLVGTVSIEKSELLSNALKKAGIKHNVLNAKFHEKEA 489
Query: 471 QIIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWM 530
+I+A+AG P +TIATNMAGRGTDI+LGG+ + ++ W
Sbjct: 490 EIVAEAGKPGAVTIATNMAGRGTDIVLGGSWQAKVEKLDNPTQEQIDAIKAE------WK 543
Query: 531 LLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQ 590
+HD+V+ +GGLHIIGTERHESRRIDNQLRGRSGRQGD GSSR +
Sbjct: 544 QVHDQVLQAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDTLLRIFTSDR 603
Query: 591 IKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQE 650
+ +++ + +G++IES + S SIE AQRK+E RNFDIRKQLLEYDD+ N+QRK++ +
Sbjct: 604 MAALIQS-GMDEGEAIESKMLSRSIEKAQRKVEGRNFDIRKQLLEYDDVANDQRKVVYEL 662
Query: 651 RNKLLESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELILKKE 701
R++L+ + +IS++I R DVL + +YI + + WDI GLE LK +
Sbjct: 663 RDELMSADDISDMIAQNREDVLNAVMDEYIPPQSLEDMWDIKGLEDRLKND 713
Score = 715 (256.8 bits), Expect = 1.5e-194, Sum P(3) = 1.5e-194
Identities = 148/290 (51%), Positives = 191/290 (65%)
Query: 4 LTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILP 63
LTK+ GSRN R L++ +KIV++IN E + LSDEEL+ +T + +Q I GE LD +LP
Sbjct: 6 LTKVIGSRNDRTLRRLRKIVKEINNYEPAFEALSDEELKAKTVEFRQRIEQGENLDQLLP 65
Query: 64 KAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQG 123
+AF+ REASKRV MRHFDVQLIGG+ LH G I+EM+TGEGKTL ATLAAYLN+L G+G
Sbjct: 66 EAFATVREASKRVFGMRHFDVQLIGGMVLHGGQIAEMRTGEGKTLTATLAAYLNALPGKG 125
Query: 124 VHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFGFD 183
VHIVT++DYLAKRDAE L+ +LG+++GVN + KK++Y+ADI YGTNNEFGFD
Sbjct: 126 VHIVTVNDYLAKRDAETNRPLFEFLGMTVGVNIPNMPQPAKKEAYQADILYGTNNEFGFD 185
Query: 184 YLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPK 243
YLRDNM F DRVQR F ARTPLIISG ++++ + +I IP
Sbjct: 186 YLRDNMAFRPEDRVQRARFFAVVDEVDSILIDEARTPLIISGPAEDSSDLYIRINKLIPL 245
Query: 244 LLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIK 293
L + G + +D ++ QV LTE G E E +L+K
Sbjct: 246 LQKQDKEDSEEYRGD-------GHFTVDEKSKQVHLTETGQEFVEELLVK 288
Score = 184 (69.8 bits), Expect = 1.5e-194, Sum P(3) = 1.5e-194
Identities = 32/60 (53%), Positives = 48/60 (80%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
++++LQ++D W EHL ++D LRQGI+LR YAQK+PK+EYKRE+F+LF +L +K + I
Sbjct: 764 KSVMLQTLDTLWKEHLAAMDHLRQGIHLRGYAQKNPKQEYKRESFELFEDLLESLKSDVI 823
Score = 40 (19.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 10/38 (26%), Positives = 22/38 (57%)
Query: 48 LKQSIHSGETLDSILPKAFSVCREASKRVLKMRHFDVQ 85
++ + GE ++S K S E ++R ++ R+FD++
Sbjct: 608 IQSGMDEGEAIES---KMLSRSIEKAQRKVEGRNFDIR 642
>TIGR_CMR|CBU_0147 [details] [associations]
symbol:CBU_0147 "preprotein translocase, SecA subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0009898 "internal
side of plasma membrane" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] [GO:0015627 "type II protein secretion
system complex" evidence=ISS] [GO:0015628 "protein secretion by the
type II secretion system" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:NP_819197.2 HSSP:P43803 ProteinModelPortal:Q83F06 SMR:Q83F06
PRIDE:Q83F06 GeneID:1208018 KEGG:cbu:CBU_0147 PATRIC:17928977
BioCyc:CBUR227377:GJ7S-148-MONOMER Uniprot:Q83F06
Length = 913
Score = 988 (352.9 bits), Expect = 6.5e-194, Sum P(3) = 6.5e-194
Identities = 197/407 (48%), Positives = 272/407 (66%)
Query: 295 ALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTL 354
ALRAH L VDE TGRLM RRW++GLHQA+EAKE IQ E QTL
Sbjct: 318 ALRAHTLFYRDVHYIVKNNEVIIVDEHTGRLMPGRRWSDGLHQAVEAKEGATIQLENQTL 377
Query: 355 ASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTME 414
A+ITFQNYFR+Y+K+SGMT TA+TEA+E Q+IY LE + +P N+ R+D D++Y T +
Sbjct: 378 ATITFQNYFRLYEKLSGMTATADTEAFELQKIYGLEVVVIPTNRPMIRRDESDQVYLTAD 437
Query: 415 EKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIA 474
K+ AI+ ++K + K QP+L+GT SIE SEL++ LKK N+ H +LNAK H+ EA+IIA
Sbjct: 438 AKFDAIVNEVKKRHEKGQPLLIGTASIEASELVARFLKKANIKHEILNAKNHEREAKIIA 497
Query: 475 QAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWMLLHD 534
+AG P +TIATNMAGRGTDI+LGGN+++ + + W HD
Sbjct: 498 EAGRPGAVTIATNMAGRGTDIVLGGNLEAEMSELDNLAEEEIQKRKAD------WQKRHD 551
Query: 535 KVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIV 594
VI++GGLH++GTERHESRRIDNQLRGRSGRQGDPGSS+ ++ +
Sbjct: 552 AVIAAGGLHVLGTERHESRRIDNQLRGRSGRQGDPGSSQFYLSMEDNLLRIFAAERMSNM 611
Query: 595 MEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKL 654
M +L + + IE + +IE AQR++E NFDIRKQLLEYDD+ N+QRK+I Q+R +L
Sbjct: 612 MRRLGVKEDDVIEHPWITRAIEKAQRRVEGMNFDIRKQLLEYDDVANDQRKVIYQQRFQL 671
Query: 655 LESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELILKKE 701
L++ +ISE I+ +R + + + S ++ + ++EWDI GLE ++++
Sbjct: 672 LQTDDISETIEAIREEAVSEMISSFVPPQSLEEEWDIPGLEKQIRED 718
Score = 740 (265.6 bits), Expect = 6.5e-194, Sum P(3) = 6.5e-194
Identities = 149/295 (50%), Positives = 201/295 (68%)
Query: 2 SFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSI 61
+ + K FG+RN+RLLK Y KIV +IN LE +Q LSD +L+ +T + K+ + GE LD++
Sbjct: 4 NIIKKAFGTRNERLLKGYSKIVSRINALEPEIQALSDADLRAKTDEFKKRLVDGEGLDAL 63
Query: 62 LPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSG 121
LP+AF+V RE S R L +RHFDVQ+IGG+ALH G I+EM+TGEGKTL AT+ AYLN+L+G
Sbjct: 64 LPEAFAVVRETSVRTLGLRHFDVQIIGGLALHGGKIAEMRTGEGKTLGATMPAYLNALTG 123
Query: 122 QGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFG 181
+GVHIVT++DYLAKRDAEWM +Y +LGL++GVN + K+ +Y ADITYGTNNEFG
Sbjct: 124 KGVHIVTVNDYLAKRDAEWMKPIYEFLGLTVGVNVPGMEPVEKQAAYAADITYGTNNEFG 183
Query: 182 FDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPI 241
FDYLRDNMVF+ + RVQR L++ ARTPLIISG+ + ++ + KI I
Sbjct: 184 FDYLRDNMVFDLDQRVQRPLHYAIIDEVDSILIDEARTPLIISGQAEESSDLYVKINKFI 243
Query: 242 PKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIKMAL 296
P+L + + GDY +D + Q +LTE G+ E ++IK L
Sbjct: 244 PQLKLQKMEEGQKEEEVPPENR--GDYTLDEKNRQAYLTEQGHRTIEALMIKQGL 296
Score = 189 (71.6 bits), Expect = 6.5e-194, Sum P(3) = 6.5e-194
Identities = 34/58 (58%), Positives = 47/58 (81%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYE 807
+ ++LQ +D +W EHL ++D LRQGI+LR YAQK+P +EYKRE+F+LF +ML IKYE
Sbjct: 769 KTLMLQLLDHHWKEHLAAMDHLRQGIHLRGYAQKNPAQEYKRESFELFTQMLKRIKYE 826
Score = 39 (18.8 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 9/37 (24%), Positives = 25/37 (67%)
Query: 597 KLKIPKGKSIESNLA-SYSI--ESAQRKIELRNFDIR 630
K ++ G+ +++ L ++++ E++ R + LR+FD++
Sbjct: 51 KKRLVDGEGLDALLPEAFAVVRETSVRTLGLRHFDVQ 87
>UNIPROTKB|P10408 [details] [associations]
symbol:secA species:83333 "Escherichia coli K-12"
[GO:0005515 "protein binding" evidence=IPI] [GO:0065002
"intracellular protein transmembrane transport" evidence=IMP]
[GO:0015031 "protein transport" evidence=IMP] [GO:0006605 "protein
targeting" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IEA;IDA]
[GO:0043952 "protein transport by the Sec complex" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0017038 "protein
import" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0065002 EMBL:X55034
TCDB:3.A.5.1.1 EMBL:M19211 GO:GO:0017038 EMBL:M20791 eggNOG:COG0653
KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 GO:GO:0043952 PIR:B64732
RefSeq:NP_414640.1 RefSeq:YP_488403.1 PDB:1TM6 PDB:2FSF PDB:2FSG
PDB:2FSH PDB:2FSI PDB:2VDA PDB:3BXZ PDBsum:1TM6 PDBsum:2FSF
PDBsum:2FSG PDBsum:2FSH PDBsum:2FSI PDBsum:2VDA PDBsum:3BXZ
ProteinModelPortal:P10408 SMR:P10408 DIP:DIP-10840N IntAct:P10408
MINT:MINT-1224866 PaxDb:P10408 PRIDE:P10408
EnsemblBacteria:EBESCT00000001277 EnsemblBacteria:EBESCT00000016064
GeneID:12932123 GeneID:944821 KEGG:ecj:Y75_p0097 KEGG:eco:b0098
PATRIC:32115301 EchoBASE:EB0929 EcoGene:EG10936 BioCyc:EcoCyc:SECA
BioCyc:ECOL316407:JW0096-MONOMER EvolutionaryTrace:P10408
Genevestigator:P10408 Uniprot:P10408
Length = 901
Score = 1665 (591.2 bits), Expect = 3.9e-190, Sum P(2) = 3.9e-190
Identities = 352/724 (48%), Positives = 467/724 (64%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS 60
+ LTK+FGSRN R L++ +K+V IN +E M+KLSDEEL+ +T++ + + GE L++
Sbjct: 3 IKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKGEVLEN 62
Query: 61 ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS 120
++P+AF+V REASKRV MRHFDVQL+GG+ L+ I+EM+TGEGKTL ATL AYLN+L+
Sbjct: 63 LIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALT 122
Query: 121 GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF 180
G+GVH+VT++DYLA+RDAE L+ +LGL++G+N + K+++Y ADITYGTNNE+
Sbjct: 123 GKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPGMPAPAKREAYAADITYGTNNEY 182
Query: 181 GFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINP 240
GFDYLRDNM F+ +RVQRKL++ ARTPLIISG +++++ + ++
Sbjct: 183 GFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKI 242
Query: 241 IPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIK------- 293
IP L+ E G + +D ++ QV LTE G E +L+K
Sbjct: 243 IPHLIRQEKEDSETFQGE-------GHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEG 295
Query: 294 ----------------MALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQ 337
ALRAH L VDE TGR M+ RRW++GLHQ
Sbjct: 296 ESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQ 355
Query: 338 ALEAKENLEIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPN 397
A+EAKE ++IQNE QTLASITFQNYFR+Y+K++GMTGTA+TEA+EF IYKL+T+ VP N
Sbjct: 356 AVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTN 415
Query: 398 KINKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLP 457
+ RKDL D +Y T EK QAI+ DIK K QPVLVGT SIE SEL+SN L K +
Sbjct: 416 RPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIK 475
Query: 458 HSVLNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXX 517
H+VLNAK H EA I+AQAG+P +TIATNMAGRGTDI+LGG+ + +
Sbjct: 476 HNVLNAKFHANEAAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEV------AALENP 529
Query: 518 XXXXXXXXXXXWMLLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXX 577
W + HD V+ +GGLHIIGTERHESRRIDNQLRGRSGRQGD GSSR
Sbjct: 530 TAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLS 589
Query: 578 XXXXXXXXXXXXQIKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYD 637
++ +M KL + G++IE + +I +AQRK+E RNFDIRKQLLEYD
Sbjct: 590 MEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVTKAIANAQRKVESRNFDIRKQLLEYD 649
Query: 638 DIYNNQRKIICQERNKLLESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELI 697
D+ N+QR+ I +RN+LL+ ++SE I +R DV YI + ++ WDI GL+
Sbjct: 650 DVANDQRRAIYSQRNELLDVSDVSETINSIREDVFKATIDAYIPPQSLEEMWDIPGLQER 709
Query: 698 LKKE 701
LK +
Sbjct: 710 LKND 713
Score = 200 (75.5 bits), Expect = 3.9e-190, Sum P(2) = 3.9e-190
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
+ ++LQ++D W EHL ++D LRQGI+LR YAQKDPK+EYKRE+F +F ML +KYE I
Sbjct: 764 KGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVI 823
Query: 810 KKIMTI 815
+ +
Sbjct: 824 STLSKV 829
>TIGR_CMR|CPS_4454 [details] [associations]
symbol:CPS_4454 "preprotein translocase, SecA subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 HOGENOM:HOG000218168 RefSeq:YP_271102.1
ProteinModelPortal:Q47VS0 SMR:Q47VS0 STRING:Q47VS0 GeneID:3522474
KEGG:cps:CPS_4454 PATRIC:21471745
BioCyc:CPSY167879:GI48-4463-MONOMER Uniprot:Q47VS0
Length = 893
Score = 1705 (605.2 bits), Expect = 1.6e-175, P = 1.6e-175
Identities = 359/723 (49%), Positives = 475/723 (65%)
Query: 2 SFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSI 61
+ LTK+FGSRN RLLK+ K V KIN LE V++ LSDEEL+ +T++ K+ GET++ +
Sbjct: 4 NLLTKMFGSRNDRLLKQMSKEVTKINALEPVLEALSDEELKAKTTEFKERFTQGETVEQL 63
Query: 62 LPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSG 121
L +AF+V REASKRV MRHFDVQ+IGG+ L+ G I+EM+TGEGKTL ATL +YLN+L+
Sbjct: 64 LVEAFAVVREASKRVFGMRHFDVQMIGGMVLNEGKIAEMRTGEGKTLTATLPSYLNALTD 123
Query: 122 QGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFG 181
+GVH++T++DYLA RDA+W L+ +LGL++G N + ++ K+ +Y++DITYGTNNEFG
Sbjct: 124 KGVHVITVNDYLATRDADWSRPLFEFLGLTVGCNVAGMTTQDKQAAYQSDITYGTNNEFG 183
Query: 182 FDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPI 241
FDYLRDNMVF+ +R Q+ L+F ARTPLIISG+ ++++ YKIIN
Sbjct: 184 FDYLRDNMVFSPQERSQKPLHFAIIDEVDSILIDEARTPLIISGQAEDSSA-LYKIINT- 241
Query: 242 PKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIKM------- 294
LVP GD+ ID + QV+LTE G E I+++
Sbjct: 242 ---LVP--TLEQQEEEDKEGEESTGDFTIDEKAKQVYLTERGQIHIEEIMVEKELLTAGD 296
Query: 295 ----------------ALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQA 338
ALRAH L VDE TGR M+ RRW+EGLHQA
Sbjct: 297 TLFSAANITLLHHVMAALRAHKLFQKDVDYIVKDDEIVIVDEHTGRTMEGRRWSEGLHQA 356
Query: 339 LEAKENLEIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNK 398
+EAKE + IQNE QTLASITFQNYFR+Y+K+SGMTGTA+TEA+EF IY LET+ +P N+
Sbjct: 357 VEAKEGVNIQNENQTLASITFQNYFRIYEKLSGMTGTADTEAFEFNHIYGLETVIIPTNQ 416
Query: 399 INKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPH 458
RKDL D IY T EEK++AIL DI++C + QPVLVGT +IE SE LS+ LKK + H
Sbjct: 417 PMVRKDLSDLIYLTTEEKFEAILADIQDCVKRGQPVLVGTIAIETSEFLSDFLKKAKIKH 476
Query: 459 SVLNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXX 518
VLNAK H+ EA+I+A AG +TIATNMAGRGTDI+LGGN+D+ I
Sbjct: 477 KVLNAKFHQQEAEIVADAGKENAVTIATNMAGRGTDIVLGGNLDATI------AKLTNPS 530
Query: 519 XXXXXXXXXXWMLLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXX 578
W + H++V+ GGLHI+ TERHESRRIDNQLRGRSGRQGD GS+R
Sbjct: 531 EDDIAKAKAQWKIDHERVLELGGLHIVATERHESRRIDNQLRGRSGRQGDEGSTRFYLSM 590
Query: 579 XXXXXXXXXXXQIKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDD 638
+I +M KL + KG++IE + SIE+AQRK+E RNFD+RKQLLEYDD
Sbjct: 591 EDSLMRIFASERISNMMRKLGMEKGEAIEHPWVTRSIENAQRKVEGRNFDMRKQLLEYDD 650
Query: 639 IYNNQRKIICQERNKLLESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELIL 698
+ N+QR +I ++RN+LL+++ I +++ +R DV+ + ++I + D+ WDI GLE L
Sbjct: 651 VANDQRGVIYEQRNELLDNEEIGSVVEAIRSDVINGVIDQHIPRQSLDEMWDIEGLEEQL 710
Query: 699 KKE 701
K E
Sbjct: 711 KGE 713
Score = 1199 (427.1 bits), Expect = 6.5e-122, P = 6.5e-122
Identities = 248/520 (47%), Positives = 331/520 (63%)
Query: 292 IKMALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNET 351
+ ALRAH L VDE TGR M+ RRW+EGLHQA+EAKE + IQNE
Sbjct: 310 VMAALRAHKLFQKDVDYIVKDDEIVIVDEHTGRTMEGRRWSEGLHQAVEAKEGVNIQNEN 369
Query: 352 QTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYK 411
QTLASITFQNYFR+Y+K+SGMTGTA+TEA+EF IY LET+ +P N+ RKDL D IY
Sbjct: 370 QTLASITFQNYFRIYEKLSGMTGTADTEAFEFNHIYGLETVIIPTNQPMVRKDLSDLIYL 429
Query: 412 TMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQ 471
T EEK++AIL DI++C + QPVLVGT +IE SE LS+ LKK + H VLNAK H+ EA+
Sbjct: 430 TTEEKFEAILADIQDCVKRGQPVLVGTIAIETSEFLSDFLKKAKIKHKVLNAKFHQQEAE 489
Query: 472 IIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWML 531
I+A AG +TIATNMAGRGTDI+LGGN+D+ I W +
Sbjct: 490 IVADAGKENAVTIATNMAGRGTDIVLGGNLDATI------AKLTNPSEDDIAKAKAQWKI 543
Query: 532 LHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQI 591
H++V+ GGLHI+ TERHESRRIDNQLRGRSGRQGD GS+R +I
Sbjct: 544 DHERVLELGGLHIVATERHESRRIDNQLRGRSGRQGDEGSTRFYLSMEDSLMRIFASERI 603
Query: 592 KIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQER 651
+M KL + KG++IE + SIE+AQRK+E RNFD+RKQLLEYDD+ N+QR +I ++R
Sbjct: 604 SNMMRKLGMEKGEAIEHPWVTRSIENAQRKVEGRNFDMRKQLLEYDDVANDQRGVIYEQR 663
Query: 652 NKLLESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELILKKEXXXXXXXXX- 710
N+LL+++ I +++ +R DV+ + ++I + D+ WDI GLE LK E
Sbjct: 664 NELLDNEEIGSVVEAIRSDVINGVIDQHIPRQSLDEMWDIEGLEEQLKGEYATELTIAKW 723
Query: 711 XXXXXXXXXXXXXXXLYT-FDXXXXXXXXXXXXXXXXXXXRNIILQSIDKYWIEHLLSLD 769
+ T F+ + ++LQS+D +W EHL ++D
Sbjct: 724 LEDDSKLHEESLREKIITEFEQAYKDKEEAVGVDVLRQFEKAVMLQSLDSHWKEHLSAMD 783
Query: 770 QLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
LRQGI LR++AQK+PK+E+KRE+F+LF +ML+ +KY+ +
Sbjct: 784 HLRQGIGLRAHAQKNPKQEFKRESFELFTEMLDNLKYDVV 823
>TIGR_CMR|ECH_1149 [details] [associations]
symbol:ECH_1149 "preprotein translocase, SecA subunit"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
RefSeq:YP_507933.1 ProteinModelPortal:Q2GF50 SMR:Q2GF50
STRING:Q2GF50 GeneID:3927909 KEGG:ech:ECH_1149 PATRIC:20577624
BioCyc:ECHA205920:GJNR-1152-MONOMER Uniprot:Q2GF50
Length = 862
Score = 1556 (552.8 bits), Expect = 6.7e-173, Sum P(2) = 6.7e-173
Identities = 341/691 (49%), Positives = 436/691 (63%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS 60
+S KIFGS N R++K + K+VQ IN +E +Q LS+E L+++T + K+ + +G+TLD
Sbjct: 2 LSIAHKIFGSTNSRIIKSFHKVVQDINAIEHEIQLLSNEALKHKTIEFKEELKNGKTLDD 61
Query: 61 ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS 120
IL AF+V REASKRVL MRHFDVQLIGGI LH G ISEM+TGEGKTLVATLAAYLN+L
Sbjct: 62 ILVPAFAVVREASKRVLNMRHFDVQLIGGIVLHKGMISEMKTGEGKTLVATLAAYLNALE 121
Query: 121 GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF 180
G+GVHIVT++DYLAKRDAEWM LY+ LG+++G +E + +K +Y DI Y TNN
Sbjct: 122 GKGVHIVTVNDYLAKRDAEWMGELYSALGITVGCILTETNDLERKNAYNCDILYSTNNNL 181
Query: 181 GFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINP 240
GFDYLRDNM F+ ++ VQR N+ ARTPLIISG++ + + + KI N
Sbjct: 182 GFDYLRDNMKFSRDEMVQRGFNYAIVDEVDSILIDEARTPLIISGQVDQDIKMYKKIDNL 241
Query: 241 IPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYE--NILIK----M 294
I +L E G I+ Q L + Y+ NI+I
Sbjct: 242 IYELA--EEDYELEEKNRNIFLTEAGITKIENLLIQHNLISSNTSLYDIDNIIIMHYITQ 299
Query: 295 ALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTL 354
ALRAH + +DEFTGR+M RR+++GLHQALEAKE L I +E QTL
Sbjct: 300 ALRAHKMFAVDKDYIIKDGNIVIIDEFTGRMMDGRRYSDGLHQALEAKEKLNINSENQTL 359
Query: 355 ASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTME 414
AS TFQNYFRMY K+SGMTGTAETE+ EF IY L+ + +P N +R DL D IY T E
Sbjct: 360 ASTTFQNYFRMYTKLSGMTGTAETESEEFLGIYNLQVVQIPTNIPVQRIDLNDDIYCTEE 419
Query: 415 EKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIA 474
EK+ +++ I C+ K QPVLVGT SIE SE+LS +L KN L HSVLNA+ H+ EA IIA
Sbjct: 420 EKFNSVIKFISECHKKLQPVLVGTVSIEKSEMLSKLLTKNKLKHSVLNARYHEQEAYIIA 479
Query: 475 QAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWMLLHD 534
QAG P ITIATNMAGRGTDI LGGN+ K +
Sbjct: 480 QAGIPGTITIATNMAGRGTDIQLGGNLKMLAKTALANITDKEAIEIKYKQLTEKVNRDKE 539
Query: 535 KVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIV 594
I +GGL +IGTERHESRRIDNQLRGRSGRQGDPG S+ +IK V
Sbjct: 540 IAIQAGGLCVIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDDLLRIFGSDKIKGV 599
Query: 595 MEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKL 654
++KL + K ++I+ S SIE AQ K+E RN+DIRK LL++D++ N QRK++ +RNK+
Sbjct: 600 LQKLGMKKDEAIQHTWISRSIEKAQHKVESRNYDIRKSLLKFDNVINEQRKVVFDQRNKI 659
Query: 655 LESKN--ISEIIKILRYDVLIRLF-SKYISL 682
L+S + IS I + L D++ + KY +L
Sbjct: 660 LDSDSYDISIIYRDLNSDIVNSIIHDKYYNL 690
Score = 146 (56.5 bits), Expect = 6.7e-173, Sum P(2) = 6.7e-173
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
+ +++ S+D W +HL +LD L+ GINLRS AQKDP E+K EAF + M++ YE I
Sbjct: 756 KKVMIMSLDYLWRDHLAALDSLKCGINLRSIAQKDPLNEFKAEAFSMLENMMSKF-YELI 814
Score = 51 (23.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 24/119 (20%), Positives = 51/119 (42%)
Query: 340 EAKENLEIQNETQTLASITFQNYFRMYKKI--SGMTGTAETEAYEFQEIYK-LETITVPP 396
+A+ +E +N + + F N +K+ ++++Y+ IY+ L + V
Sbjct: 622 KAQHKVESRNYDIRKSLLKFDNVINEQRKVVFDQRNKILDSDSYDISIIYRDLNSDIV-- 679
Query: 397 NKINKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNN 455
N I + DK Y ++ Y+A+ + Y + + ++I N E +L+ N
Sbjct: 680 NSI-----IHDKYYNLDDDTYKALSSEFTRIY----NITLDYSTISNFESKDKVLEHLN 729
>TIGR_CMR|CHY_0162 [details] [associations]
symbol:CHY_0162 "preprotein translocase, SecA subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0009306 "protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0017038
HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_359034.1 ProteinModelPortal:Q3AFQ0
SMR:Q3AFQ0 STRING:Q3AFQ0 GeneID:3727591 KEGG:chy:CHY_0162
PATRIC:21273509 BioCyc:CHYD246194:GJCN-162-MONOMER Uniprot:Q3AFQ0
Length = 874
Score = 1531 (544.0 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 327/699 (46%), Positives = 444/699 (63%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS 60
+ FL + N R +K+ V++IN LE MQKLSDEEL+ +T + K+ I GE+LD
Sbjct: 2 LKFLKNLLDD-NAREIKRLTARVEEINSLEPQMQKLSDEELRAKTGEFKERIARGESLDE 60
Query: 61 ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS 120
+LP+AF+V REAS+RVL MRHFDVQL+GGI LH G I+EM+TGEGKTLVATL AYLN+L+
Sbjct: 61 LLPEAFAVVREASRRVLGMRHFDVQLMGGIVLHEGKIAEMKTGEGKTLVATLPAYLNALT 120
Query: 121 GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF 180
G+GVHIVT++DYLA+RDAEWM +Y +LGLS+G+ + ++ KK +Y ADITYGTNNEF
Sbjct: 121 GRGVHIVTVNDYLARRDAEWMGKIYKFLGLSVGLVVHGMDYAEKKAAYLADITYGTNNEF 180
Query: 181 GFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINP 240
GFDYLRDNM + + VQR+L + ARTPLIISGE + + +Y
Sbjct: 181 GFDYLRDNMAIHPDQVVQRELYYAIIDEVDSILIDEARTPLIISGEAEKSTDLYYTFAK- 239
Query: 241 IPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIKMALRAHV 300
I K LVP G + ++ L + + + + L AL+A
Sbjct: 240 IVKQLVPGEDYTVDEKAHAVMPTEAGIHKVEKMLGIQNLYADEHMELTHHL-NAALKAQA 298
Query: 301 LXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITFQ 360
L VDEFTGRLM RR+++GLHQA+EAKE ++I+ ETQTLA+ITFQ
Sbjct: 299 LMKRDRDYVVKDGQVIIVDEFTGRLMFGRRYSDGLHQAIEAKEGVKIEQETQTLATITFQ 358
Query: 361 NYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQAI 420
NYFRMY+K++GMTGTAETE EF++IY L + +P +K RKDL D I+KT + K++AI
Sbjct: 359 NYFRMYEKLAGMTGTAETEENEFRKIYNLSVVVIPTHKPMIRKDLPDVIFKTEKAKFKAI 418
Query: 421 LMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGHPK 480
+ ++ + QP+L+GT SIE SE+LS +LKK +PH VLNAK H+ EA+I+AQAG
Sbjct: 419 VEEVARRHQTGQPILIGTISIEKSEMLSEMLKKRGIPHQVLNAKYHEKEAEIVAQAGRLG 478
Query: 481 MITIATNMAGRGTDIILGGNIDSY-IKDXXXXXXXXXXXXXXXXXXXXXWMLL----HDK 535
+TIATNMAGRGTDI+LGGN + +++ + + H K
Sbjct: 479 AVTIATNMAGRGTDILLGGNPEFLALQELRKMGKTPEDDPELYRELLAKYKKITDEEHKK 538
Query: 536 VISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIVM 595
V+ GGLHIIGTERHESRRIDNQLRGR+GRQGDPGSS+ I +M
Sbjct: 539 VVELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFISLEDDLMRLFGSDNIAGLM 598
Query: 596 EKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKLL 655
++L + + IE L + SIE+AQ+++E RNF+IRK +LEYD++ N QR++I +R ++L
Sbjct: 599 DRLGLDEDTPIEHPLITRSIETAQKRVENRNFEIRKHVLEYDNVMNQQRELIYSQRRRVL 658
Query: 656 ESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGL 694
+++ + + V+ R Y +EWD+ GL
Sbjct: 659 FGEDVLTFVHQMIEAVVERAVDTYCPDGVHPEEWDLKGL 697
Score = 162 (62.1 bits), Expect = 6.0e-172, Sum P(2) = 6.0e-172
Identities = 28/66 (42%), Positives = 49/66 (74%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
R +IL+ +D+ W++HL ++DQLR+GI LR+Y QKDP EYK E+ ++F+ M+ I+ + +
Sbjct: 753 RYVILRVVDEKWMDHLDAMDQLREGIGLRAYGQKDPLVEYKIESVEMFNNMIAAIQEDVV 812
Query: 810 KKIMTI 815
+ +M +
Sbjct: 813 RYLMRL 818
Score = 44 (20.5 bits), Expect = 1.8e-159, Sum P(2) = 1.8e-159
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 751 NIILQSIDKYWIEHLLSLDQLRQGINLR-------SYAQKDPKREYKRE 792
N ++ +I + + +L+ L +RQ R Y ++ PK+ Y+RE
Sbjct: 801 NNMIAAIQEDVVRYLMRLSVVRQPETRRVRRVVENRYQEEGPKKPYRRE 849
>TIGR_CMR|CJE_1020 [details] [associations]
symbol:CJE_1020 "preprotein translocase, SecA subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR001650
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
Pfam:PF00271 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
GO:GO:0003676 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0004386
GO:GO:0017038 HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_179018.1 ProteinModelPortal:Q5HUL7
STRING:Q5HUL7 GeneID:3231531 KEGG:cjr:CJE1020 PATRIC:20043841
BioCyc:CJEJ195099:GJC0-1048-MONOMER Uniprot:Q5HUL7
Length = 862
Score = 1186 (422.6 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 257/519 (49%), Positives = 331/519 (63%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS 60
++ L +FG++N R +KKY K V +IN LE Q LSD+EL+ + +K K+ I SGE ++
Sbjct: 3 LNTLKAVFGTKNDREVKKYFKRVAQINALEGNYQNLSDDELKAEFAKFKEQILSGEKNEN 62
Query: 61 -ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSL 119
+L F++ RE KR L MRHFDVQLIGG+ LH G I+EM+TGEGKTLVATL LN++
Sbjct: 63 DVLNDVFAIVRETGKRTLNMRHFDVQLIGGMVLHDGKIAEMKTGEGKTLVATLPVVLNAM 122
Query: 120 SGQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVN-SSEISHSLKKKSYEADITYGTNN 178
SG+GVH+VT++DYLAKRDAE MS +YN+LG S+GV SS+ S K++Y+ DITYGTNN
Sbjct: 123 SGKGVHVVTVNDYLAKRDAEQMSAIYNFLGFSVGVVLSSQNSDIEHKQAYDCDITYGTNN 182
Query: 179 EFGFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKII 238
EFGFDYLRDNM F+ ++VQR+ NFV ARTPLIISG + K
Sbjct: 183 EFGFDYLRDNMKFSKAEKVQREHNFVIVDEVDSILIDEARTPLIISGPTNRTLDGYIKA- 241
Query: 239 NPIPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENIL------- 291
N + K + GD+++D + + +TE G K E +
Sbjct: 242 NEVAKQM-------QKGEAVLPPAKPEGDFVVDEKNRNILITEAGIAKAEKLFGVENLYS 294
Query: 292 ---------IKMALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAK 342
+ AL+AH L VDEFTGRL + RR++EGLHQALEAK
Sbjct: 295 LDNAILAHQLDQALKAHNLFEKDVHYVLRNNEVIIVDEFTGRLSEGRRFSEGLHQALEAK 354
Query: 343 ENLEIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKR 402
EN++IQ E+QTLA ITFQNYFRMY K++GMTGTA+TEA EF +IY L+ I++P N KR
Sbjct: 355 ENVKIQEESQTLADITFQNYFRMYNKLAGMTGTAQTEATEFSQIYSLDVISIPTNIPIKR 414
Query: 403 KDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLN 462
+D D IYKT EK++A++ +IK K QPVLVGT SIE SE+ N+L K +PH VLN
Sbjct: 415 QDKDDLIYKTQNEKFKAVIEEIKKANAKGQPVLVGTASIERSEVFHNMLVKEKIPHHVLN 474
Query: 463 AKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIILGGNI 501
AK H+ EA II AG +TIATNMAGRG DI + I
Sbjct: 475 AKNHEQEALIIQDAGKKGAVTIATNMAGRGVDIKIDDEI 513
Score = 330 (121.2 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 65/125 (52%), Positives = 90/125 (72%)
Query: 532 LHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQI 591
+ D++ + GGL+IIGTERHESRRIDNQLRGR+GRQGDPG SR +I
Sbjct: 509 IDDEIRALGGLYIIGTERHESRRIDNQLRGRAGRQGDPGISRFYLSLEDNLLRIFGGDRI 568
Query: 592 KIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQER 651
K +M++L I +G+SIES + + ++E+AQ+K+E +F+ RK LLEYDD+ N QRK I + R
Sbjct: 569 KSIMDRLGIEEGESIESRIVTRAVENAQKKVESLHFESRKHLLEYDDVANEQRKTIYRYR 628
Query: 652 NKLLE 656
N+LL+
Sbjct: 629 NELLD 633
Score = 163 (62.4 bits), Expect = 8.3e-169, Sum P(3) = 8.3e-169
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
R + LQ +D W EHL +D L+ GI LR Y QKDP EYK+E++ LF +++N IK+++I
Sbjct: 725 RILYLQVLDNAWREHLYQMDILKTGIGLRGYNQKDPLVEYKKESYNLFLELVNRIKFDSI 784
Query: 810 KKIMTI 815
K + ++
Sbjct: 785 KLLFSV 790
Score = 40 (19.1 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 12/47 (25%), Positives = 28/47 (59%)
Query: 590 QIKIVMEKLK--IPKGKSIESNLAS--YSI--ESAQRKIELRNFDIR 630
++K K K I G+ E+++ + ++I E+ +R + +R+FD++
Sbjct: 42 ELKAEFAKFKEQILSGEKNENDVLNDVFAIVRETGKRTLNMRHFDVQ 88
Score = 37 (18.1 bits), Expect = 2.8e-122, Sum P(2) = 2.8e-122
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 613 YSIESAQRKIELRNFDIRKQLLEYD-DIYN 641
Y ++ + I LR ++ + L+EY + YN
Sbjct: 741 YQMDILKTGIGLRGYNQKDPLVEYKKESYN 770
>NCBI_NP|NP_357091.2 [details] [associations]
symbol:secA "preprotein translocase subunit SecA"
species:176299 "Agrobacterium fabrum str. C58" [GO:0015627 "type II
protein secretion system complex" evidence=ISS] [GO:0015628
"protein secretion by the type II secretion system" evidence=ISS]
REFSEQ:NC_003063 Ncbi:NP_357091
Length = 902
Score = 1479 (525.7 bits), Expect = 1.2e-166, Sum P(2) = 1.2e-166
Identities = 315/695 (45%), Positives = 433/695 (62%)
Query: 6 KIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILPKA 65
K+FGS N+R ++ Y+ + IN LE + LSDE L +T++ +Q + G+TLD +L A
Sbjct: 10 KLFGSANERRVRSYKSKIAAINALEEATKALSDEALAAKTAEFRQQLADGKTLDDLLIPA 69
Query: 66 FSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQGVH 125
F+V REAS+RVL MR FDVQL G + LH G I+EM+TGEGKTLVATLA YLN+L+G+GVH
Sbjct: 70 FAVAREASRRVLHMRPFDVQLTGAMILHGGAIAEMKTGEGKTLVATLAVYLNALAGKGVH 129
Query: 126 IVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFGFDYL 185
+VT++DYLAKRDA MS LY +LGL+ GV + ++++Y DITY TNNE GFDYL
Sbjct: 130 VVTVNDYLAKRDAATMSKLYGFLGLTTGVIVHGLDDDQRREAYACDITYATNNELGFDYL 189
Query: 186 RDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPKLL 245
RDNM ++ VQR N+ ARTPLIISG + + + Y I+ LL
Sbjct: 190 RDNMKYDRAQMVQRGHNYAIVDEVDSILVDEARTPLIISGPLDDRSD-LYNTIDAFIPLL 248
Query: 246 VPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILI----KMALRAHVL 301
PE + + + L EN+ I AL+AH L
Sbjct: 249 SPEDYEIDEKQRSANFSEDGTEKLENLLRQAGLLKGESLYDIENVAIVHHINNALKAHKL 308
Query: 302 XXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITFQN 361
+DEFTGR+M RR++EG HQALEAKE ++IQ E QTL+S+TFQN
Sbjct: 309 FTRDKDYIVRNDEIVIIDEFTGRMMPGRRYSEGQHQALEAKEKVQIQPENQTLSSVTFQN 368
Query: 362 YFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQAIL 421
YFRMY+K++GMTGTA TEA EF IY L+ I VP N +R D D++Y+T EEK+ AI+
Sbjct: 369 YFRMYEKLAGMTGTASTEAEEFGNIYGLDVIEVPTNLPIQRIDEDDEVYRTGEEKFLAII 428
Query: 422 MDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPH-SVLNAKQHKLEAQIIAQAGHPK 480
+IK + + QPVLVGTTSIE SELL+++L+++ VLNA+ H+ EA I++QAG P
Sbjct: 429 TEIKAAHERGQPVLVGTTSIEKSELLAHMLRQSGFTDFQVLNARYHEQEAYIVSQAGVPG 488
Query: 481 MITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWMLLHDKVISSG 540
+TIATNMAGRGTDI LGGN+D ++ +L +K +++G
Sbjct: 489 AVTIATNMAGRGTDIQLGGNVDMRLERELEGMEPGPELDAKEAAIRAEIKVLKEKALAAG 548
Query: 541 GLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIVMEKLKI 600
GL++I TERHESRRIDNQLRGRSGRQGDPG S+ ++ +++KL +
Sbjct: 549 GLYVIATERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSERMDSMLQKLGL 608
Query: 601 PKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKLLESKNI 660
G++I + ++E AQ+K+E RNF+ RK LL+YDD+ N+QRK+I +R +L+E+ NI
Sbjct: 609 KDGEAIVHPWINKALERAQKKVEARNFETRKNLLKYDDVLNDQRKVIFDQRLELMEADNI 668
Query: 661 SEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGLE 695
E +R++V+ L +K+I ++WDI GL+
Sbjct: 669 GETAADMRHEVIEALVTKHIPENAYAEQWDIAGLK 703
Score = 164 (62.8 bits), Expect = 1.2e-166, Sum P(2) = 1.2e-166
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
R++ILQ+ID W EH+++LD LR + R YAQ+DP +EYK EAF+LF +L ++
Sbjct: 759 RSVILQTIDHLWREHIVNLDHLRSVVGFRGYAQRDPLQEYKAEAFELFQSLLTNLREAVT 818
Query: 810 KKIMTI 815
++M +
Sbjct: 819 AQLMRV 824
>TIGR_CMR|BA_5421 [details] [associations]
symbol:BA_5421 "preprotein translocase, SecA subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR001650
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF00271 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006605 GO:GO:0046872 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 GO:GO:0004386 GO:GO:0017038
RefSeq:NP_847590.1 RefSeq:YP_022083.1 RefSeq:YP_031277.1
HSSP:P10408 ProteinModelPortal:Q81X26 SMR:Q81X26 DNASU:1085014
EnsemblBacteria:EBBACT00000011636 EnsemblBacteria:EBBACT00000014899
EnsemblBacteria:EBBACT00000020362 GeneID:1085014 GeneID:2818649
GeneID:2851945 KEGG:ban:BA_5421 KEGG:bar:GBAA_5421 KEGG:bat:BAS5038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 BioCyc:BANT260799:GJAJ-5113-MONOMER
BioCyc:BANT261594:GJ7F-5289-MONOMER Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR004027 InterPro:IPR014018
Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886 TIGRFAMs:TIGR00963
PROSITE:PS51196 Uniprot:Q81X26
Length = 835
Score = 1176 (419.0 bits), Expect = 4.1e-165, Sum P(3) = 4.1e-165
Identities = 250/504 (49%), Positives = 336/504 (66%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS 60
+ L K+F NQR +K+ QK V++I+ LES ++ L+DE+L+ +T + K+ + GET+D
Sbjct: 2 IGILKKVFDV-NQRQIKRMQKTVEQIDALESSIKPLTDEQLKGKTLEFKERLTKGETVDD 60
Query: 61 ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS 120
+LP+AF+V REA+ RVL MR + VQL+GGIALH GNISEM+TGEGKTL +TL YLN+L+
Sbjct: 61 LLPEAFAVVREAATRVLGMRPYGVQLMGGIALHEGNISEMKTGEGKTLTSTLPVYLNALT 120
Query: 121 GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF 180
G+GVH+VT+++YLA+RDA M L+ +LGL++G+N + +S K+++Y ADITY TNNE
Sbjct: 121 GKGVHVVTVNEYLAQRDANEMGQLHEFLGLTVGINLNSMSREEKQEAYAADITYSTNNEL 180
Query: 181 GFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINP 240
GFDYLRDNMV VQR L+F ARTPLIISG+ + + + Y N
Sbjct: 181 GFDYLRDNMVLYKEQCVQRPLHFAIIDEVDSILVDEARTPLIISGQAQKSTE-LYMFANA 239
Query: 241 IPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYE-KYENIL--IKMALR 297
+ L E G I E + F EN ++ K+ +L I ALR
Sbjct: 240 FVRTLENEKDYSFDVKTKNVMLTEDG--ITKAE--KAFHIENLFDLKHVALLHHINQALR 295
Query: 298 AHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASI 357
AHV+ VD+FTGRLMK RR++EGLHQA+EAKE +EIQNE+ TLA+I
Sbjct: 296 AHVVMHRDTDYVVQEGEIVIVDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATI 355
Query: 358 TFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKY 417
TFQNYFRMY+K+SGMTGTA+TE EF+ IY + I +P NK R D D I+K+M+ K+
Sbjct: 356 TFQNYFRMYEKLSGMTGTAKTEEEEFRNIYNMNVIVIPTNKPIIRDDRADLIFKSMKGKF 415
Query: 418 QAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAG 477
A++ DI N + + QPVLVGT +IE SEL+S +L + + H++LNAK H EA IIA+AG
Sbjct: 416 NAVVEDIVNRHKQGQPVLVGTVAIETSELISKMLTRKGVRHNILNAKNHAREADIIAEAG 475
Query: 478 HPKMITIATNMAGRGTDIILGGNI 501
+TIATNMAGRGTDI LG +I
Sbjct: 476 MKGAVTIATNMAGRGTDIKLGDDI 499
Score = 323 (118.8 bits), Expect = 4.1e-165, Sum P(3) = 4.1e-165
Identities = 64/158 (40%), Positives = 104/158 (65%)
Query: 537 ISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIVME 596
I + GL +IGTERHESRRIDNQLRGR+GRQGDPG ++ +K +M+
Sbjct: 499 IKNIGLAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYLSMEDELMRRFGSDNMKAMMD 558
Query: 597 KLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKLLE 656
+L + + IES + S ++ESAQ+++E N+D RKQLL+YDD+ QR++I ++R +++E
Sbjct: 559 RLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQYDDVLRQQREVIYKQRQEVME 618
Query: 657 SKNISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGL 694
S+N+ II+ + + R + + ++ +++W+I GL
Sbjct: 619 SENLRGIIEGMMKSTVERAVALHTQ-EEIEEDWNIKGL 655
Score = 145 (56.1 bits), Expect = 4.1e-165, Sum P(3) = 4.1e-165
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 752 IILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAIKK 811
++ + +D W EH+ ++D LR+GI+LR+Y Q DP REY+ E F +F M+ I+ E +
Sbjct: 713 VVFRVVDTKWTEHIDAMDHLREGIHLRAYGQIDPLREYQMEGFAMFESMIASIEEEISRY 772
Query: 812 IM 813
IM
Sbjct: 773 IM 774
>TIGR_CMR|APH_1178 [details] [associations]
symbol:APH_1178 "preprotein translocase, SecA subunit"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:CP000235 GenomeReviews:CP000235_GR InterPro:IPR014001
SMART:SM00487 GO:GO:0017038 eggNOG:COG0653 KO:K03070
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_505716.1 ProteinModelPortal:Q2GIT5
SMR:Q2GIT5 STRING:Q2GIT5 GeneID:3930719 KEGG:aph:APH_1178
PATRIC:20951136 OMA:NMEVIEI BioCyc:APHA212042:GHPM-1184-MONOMER
Uniprot:Q2GIT5
Length = 873
Score = 1447 (514.4 bits), Expect = 3.2e-162, Sum P(2) = 3.2e-162
Identities = 320/695 (46%), Positives = 424/695 (61%)
Query: 1 MSFLTKIFGSRNQRLL-KKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGE-TL 58
+S ++F + R KIV+ IN LE M LS E L +T + ++ + G TL
Sbjct: 2 LSIAKRVFWPYSSRAKGASVHKIVKSINALEGEMAALSSEALFGKTGEFRKMLSEGTVTL 61
Query: 59 DSILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNS 118
D +L AF+V REAS+RVL MRHFDVQLIGGIALH G I+EM+TGEGKTLVATLAAYLN+
Sbjct: 62 DDLLVPAFAVVREASRRVLDMRHFDVQLIGGIALHRGMIAEMKTGEGKTLVATLAAYLNA 121
Query: 119 LSGQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNN 178
L +GVH+VT++DYLA+RD+EWM LY+ LG+S+G +S S +K +Y DI Y TNN
Sbjct: 122 LESKGVHVVTVNDYLAERDSEWMGKLYSALGISVGCITSSSSDEARKAAYNCDILYSTNN 181
Query: 179 EFGFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKII 238
E GFDYLRDNM F+ + VQR N+ +RTPLIISG ++ ++ + K+
Sbjct: 182 ELGFDYLRDNMKFSRENMVQRGYNYAIVDEVDSILIDESRTPLIISGPVERDSSLYGKV- 240
Query: 239 NPIPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKY--ENIL----I 292
+ + + L E + + + E G Y ENI+ +
Sbjct: 241 DALVRDLEQEDYDIDEKSKTAFLTEDGALKVEQLLISHQLIPE-GSSLYSAENIIMMHYV 299
Query: 293 KMALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQ 352
ALRAH L +DEFTGR+M RR+++GLHQALEAKE + I NE Q
Sbjct: 300 GQALRAHKLYFADKDYIVKNGSVVIIDEFTGRMMDGRRYSDGLHQALEAKEGVRINNENQ 359
Query: 353 TLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKT 412
TLAS TFQNYFRMYK++SGMTGTAETEA EF Y L+ + +P N +R DL D IY T
Sbjct: 360 TLASTTFQNYFRMYKRLSGMTGTAETEADEFLGTYNLQVMQIPTNVPVQRVDLDDDIYCT 419
Query: 413 MEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQI 472
EEKY+A++ I C+ ++QP LVGT SIE SELLS +L + HSVLNA+ H+ EA I
Sbjct: 420 EEEKYEAVIDFIIECHKRKQPTLVGTISIEKSELLSKLLTMRGIKHSVLNARYHEKEAYI 479
Query: 473 IAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWMLL 532
IAQAG P +TIATNMAGRGTDI LGGN + ++
Sbjct: 480 IAQAGKPGAVTIATNMAGRGTDIKLGGNPEMLARNELAGITDEEERAKRINKIIE--QAK 537
Query: 533 HDK--VISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQ 590
HDK V+ +GGL IIGTERHESRRIDNQLRGRSGRQGDPG S+ +
Sbjct: 538 HDKEIVMQAGGLCIIGTERHESRRIDNQLRGRSGRQGDPGLSKFFLSLEDGLLRIFGSDK 597
Query: 591 IKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQE 650
++ ++++L + +G++I+ + +IE AQ+K+E RN+DIRK LL +DD+ N QRK+I +
Sbjct: 598 VRGMLKRLGMKRGEAIQHKWINRAIERAQKKVEARNYDIRKSLLRFDDVINEQRKVIFAQ 657
Query: 651 RNKLL--ESKNISEIIKILRYDVLIRLFS-KYISL 682
RN++L E+ ++ L D++ R+ KY L
Sbjct: 658 RNQILDRETYDLVPFYSNLNCDIVSRIIKEKYCDL 692
Score = 154 (59.3 bits), Expect = 3.2e-162, Sum P(2) = 3.2e-162
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
R +++ S+D W +HL +LD L+ GINLRS QKDP E+K EAF L KML+ I
Sbjct: 759 RRVLITSLDHLWTDHLAALDSLKCGINLRSVGQKDPLNEFKIEAFYLLEKMLSRFYEMVI 818
Query: 810 KKIMTI 815
+K+ I
Sbjct: 819 QKLAHI 824
>TIGR_CMR|NSE_0232 [details] [associations]
symbol:NSE_0232 "preprotein translocase, SecA subunit"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 OMA:NMEVIEI
RefSeq:YP_506126.1 ProteinModelPortal:Q2GEH0 STRING:Q2GEH0
GeneID:3931784 KEGG:nse:NSE_0232 PATRIC:22680561
ProtClustDB:CLSK2528079 BioCyc:NSEN222891:GHFU-262-MONOMER
Uniprot:Q2GEH0
Length = 804
Score = 1474 (523.9 bits), Expect = 2.2e-161, Sum P(2) = 2.2e-161
Identities = 320/674 (47%), Positives = 430/674 (63%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHS-GETLD 59
+ + KIF SRN+++ +K + ++++N LE+ ++ LS +EL+N+TS+ K+ + +LD
Sbjct: 2 LDLVHKIFDSRNRKIKRKLKDGLEQVNSLETRIRDLSSDELRNKTSEFKERLFKQSASLD 61
Query: 60 SILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSL 119
ILP+A++ REAS R L MRHFDVQ++GGI LH+G ISEM TGEGKTLVATLAAYLN+L
Sbjct: 62 EILPEAYACVREASLRTLGMRHFDVQIMGGIVLHWGMISEMHTGEGKTLVATLAAYLNAL 121
Query: 120 SGQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNE 179
S +GVH+VT++DYLA+RD EWM +Y LGL + +S++ + +Y+ADITY TNNE
Sbjct: 122 SEKGVHVVTVNDYLARRDTEWMKQIYRHLGLQVSCITSDMRDPERAHAYKADITYATNNE 181
Query: 180 FGFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIIN 239
GFDYLRDNM F+ + VQR L++ ARTPLIISG + +NA Y Y +N
Sbjct: 182 LGFDYLRDNMKFSKGEMVQRDLHYAIVDEVDSILIDEARTPLIISG-VTDNASYLYASMN 240
Query: 240 PIPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYE--NI----LIK 293
+ + L + I + F+ E+G YE N+ +
Sbjct: 241 KLAEKLDSTLYIVDEKTRTVSLTEEGQEAIEKLLMAEKFI-ESGSSLYEPQNLQLVHCLN 299
Query: 294 MALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQT 353
+L+A L +DEFTGR+M RR++EGLHQALEAKENL+IQNE QT
Sbjct: 300 QSLKAINLFQKNKDYIVQDGQIVLIDEFTGRMMHGRRYSEGLHQALEAKENLKIQNENQT 359
Query: 354 LASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTM 413
LASITFQNYFRMY K+SGMTGTA TE EF IY LE + +P + +R D D+IY +
Sbjct: 360 LASITFQNYFRMYGKLSGMTGTAATEREEFSTIYGLEVVQIPSHLPVRRVDHDDEIYASK 419
Query: 414 EEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQII 473
+EKY+AIL K C+ K QP+L+GTTSIENSE LS LKK L HSVLNAKQH EA+II
Sbjct: 420 KEKYEAILALAKECHEKLQPILIGTTSIENSEELSRELKKAKLKHSVLNAKQHAFEAEII 479
Query: 474 AQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWMLLH 533
AQAG P ITIATNMAGRGTDI LGGNI+ I
Sbjct: 480 AQAGKPGAITIATNMAGRGTDIQLGGNINFNISANDEAEKEHAKN--------------E 525
Query: 534 DKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKI 593
+ V +GGL++IGTERHESRRIDNQLRGRSGRQGDPG S+ I+
Sbjct: 526 EIVRKAGGLYVIGTERHESRRIDNQLRGRSGRQGDPGESKFFLSLDDDLLRVFGTSGIRN 585
Query: 594 VMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNK 653
+++K ++ +I+ + + S+E AQ+K+E RN++IRK L+++DD+ N QRK+I +RN
Sbjct: 586 MLKK-QLSNNGAIKHSYITRSLEKAQKKVESRNYEIRKNLIKFDDVINEQRKVIFSQRNN 644
Query: 654 LLESKNISEIIKIL 667
++ES +I +++ I+
Sbjct: 645 IMESGDI-DLLPIV 657
Score = 119 (46.9 bits), Expect = 2.2e-161, Sum P(2) = 2.2e-161
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKM 800
+ I++ +D+ W EHL L+ LR INL++ AQK+P E+K EAF+ F ++
Sbjct: 728 KRIMIAILDQLWKEHLQFLENLRLSINLKAVAQKNPLIEFKHEAFQAFQRL 778
>TIGR_CMR|SPO_0057 [details] [associations]
symbol:SPO_0057 "preprotein translocase, SecA subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0017038 HSSP:P10408
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:YP_165331.1 ProteinModelPortal:Q5LWK0 GeneID:3194508
KEGG:sil:SPO0057 PATRIC:23373349 Uniprot:Q5LWK0
Length = 901
Score = 1431 (508.8 bits), Expect = 4.2e-160, Sum P(2) = 4.2e-160
Identities = 304/695 (43%), Positives = 428/695 (61%)
Query: 6 KIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILPKA 65
K+FG+ N R +K + +V +IN LE KL+DE L+ +T +L++ GE+LD++LP+A
Sbjct: 10 KVFGTPNDRKIKATRPVVAQINALEEEFAKLTDEGLKQKTDELRKRALDGESLDALLPEA 69
Query: 66 FSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQGVH 125
F+ CREA KR L +R FD QL+GGI LH GNISEM+TGEGKTLVAT AYLN+L+G+GVH
Sbjct: 70 FANCREAGKRALGLRAFDTQLMGGIFLHQGNISEMKTGEGKTLVATFPAYLNALTGKGVH 129
Query: 126 IVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFGFDYL 185
+VT+++YLAKRD+EWM ++ LG++ GV S + K +YE+DITY TNNE GFDYL
Sbjct: 130 VVTVNEYLAKRDSEWMGKVFAALGMTTGVIWSGQPDAEKMAAYESDITYATNNELGFDYL 189
Query: 186 RDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPKLL 245
RDNM ++ Q++ NF ARTPLIISG ++ + + I +P L
Sbjct: 190 RDNMKGELSEVYQKQHNFAIVDEVDSILIDEARTPLIISGPAQDRSDLYVAIDALLPAL- 248
Query: 246 VPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYE----NIL--IKMALRAH 299
+ G+ ++ + L G Y+ I+ + LRAH
Sbjct: 249 -SDDHFELDEKTRNVTFTDEGNEFLEAQLVARGLLPEGQSLYDPESTTIVHHVNQGLRAH 307
Query: 300 VLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITF 359
L +DEFTGR+M RR ++GLHQA+EAKEN +IQ E TLAS+TF
Sbjct: 308 KLFQRDKDYIVRDGEVVLIDEFTGRMMPGRRLSDGLHQAIEAKENAQIQPENVTLASVTF 367
Query: 360 QNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQA 419
QNYFR+Y K+SGMTGTA TEA EF EIY L + VP N+ R D D++Y+T EKY A
Sbjct: 368 QNYFRLYDKLSGMTGTALTEAEEFAEIYGLGVVEVPTNRPIARTDEDDQVYRTAAEKYGA 427
Query: 420 ILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGHP 479
++ + K + K QPVL+GTTSIE SE+LS +L K + H+VLNA+QH+ EAQI+A+AG
Sbjct: 428 MIDETKKAHEKGQPVLLGTTSIEKSEMLSQMLTKEGIEHNVLNARQHEREAQIVAEAGRY 487
Query: 480 KMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWMLLHDKVISS 539
+TIATNMAGRGTDI LGGN++ + + KV+ +
Sbjct: 488 GAVTIATNMAGRGTDIQLGGNVEMKVLEALAENPEADPVELRAAEEARH-AEEKQKVLDA 546
Query: 540 GGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIVMEKLK 599
GGL+++ +ERHESRRIDNQLRGRSGRQGDPG + ++ V+ L
Sbjct: 547 GGLYVMASERHESRRIDNQLRGRSGRQGDPGRTVFYLSLEDDLMRIFGSERLDKVLTTLG 606
Query: 600 IPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKLLESKN 659
+ +G++I + S+E AQ K+E RNFD+RK +L++DD+ N+QRK+I +R +++ +++
Sbjct: 607 MKEGEAIIHPWVNKSLERAQAKVEGRNFDMRKNVLKFDDVMNDQRKVIFNQRREIMATED 666
Query: 660 ISEIIKILRYDVLIRLFSKYISLKKSDKEWDIIGL 694
+S+++ +R V+ L +Y+ K +WD GL
Sbjct: 667 LSDVVADMREQVIDDLIDEYMPPKTYADQWDTQGL 701
Score = 150 (57.9 bits), Expect = 4.2e-160, Sum P(2) = 4.2e-160
Identities = 26/66 (39%), Positives = 43/66 (65%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
+ ++LQ+ID W EHLL L+ LR + R YAQ+DP EYK E+F+LF +L+ ++
Sbjct: 758 KQVLLQTIDSKWREHLLKLEHLRSVVGFRGYAQRDPLNEYKTESFQLFEGLLDSLRETVT 817
Query: 810 KKIMTI 815
+++ +
Sbjct: 818 QQLSRV 823
>UNIPROTKB|P0A5Y8 [details] [associations]
symbol:secA1 "Protein translocase subunit SecA 1"
species:1773 "Mycobacterium tuberculosis" [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0031522 "cell envelope Sec
protein transport complex" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0043952 "protein transport by the Sec complex"
evidence=IDA] [GO:0051701 "interaction with host" evidence=TAS]
[GO:0052059 "evasion or tolerance by symbiont of host-produced
reactive oxygen species" evidence=TAS] [GO:0052572 "response to
host immune response" evidence=TAS] HAMAP:MF_01382
InterPro:IPR000185 InterPro:IPR011115 InterPro:IPR011116
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516
Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957
SMART:SM00958 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0040007 GO:GO:0005618 GO:GO:0006605 Reactome:REACT_116125
GO:GO:0005576 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0016887 EMBL:BX842582 GO:GO:0052059
TCDB:3.A.5.2.2 GO:GO:0017038 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR014018 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 PIR:B70592 RefSeq:NP_337866.1
RefSeq:YP_006516716.1 RefSeq:YP_177950.1 PDB:1NKT PDB:1NL3
PDBsum:1NKT PDBsum:1NL3 ProteinModelPortal:P0A5Y8 SMR:P0A5Y8
PRIDE:P0A5Y8 EnsemblBacteria:EBMYCT00000000278
EnsemblBacteria:EBMYCT00000071189 GeneID:13318062 GeneID:888860
GeneID:922590 KEGG:mtc:MT3338 KEGG:mtu:Rv3240c KEGG:mtv:RVBD_3240c
PATRIC:18129094 TubercuList:Rv3240c HOGENOM:HOG000218168
EvolutionaryTrace:P0A5Y8 GO:GO:0031522 GO:GO:0043952 Uniprot:P0A5Y8
Length = 949
Score = 1382 (491.5 bits), Expect = 2.4e-155, Sum P(2) = 2.4e-155
Identities = 302/714 (42%), Positives = 437/714 (61%)
Query: 4 LTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSI---HSGETLDS 60
L+K+ R++K+ +K+ + L ++KL+D EL+ +T + K+ + + ETLD
Sbjct: 2 LSKLLRLGEGRMVKRLKKVADYVGTLSDDVEKLTDAELRAKTDEFKRRLADQKNPETLDD 61
Query: 61 ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS 120
+LP+AF+V REA+ RVL R FDVQ++G ALH GN++EM+TGEGKTL L AYLN+L+
Sbjct: 62 LLPEAFAVAREAAWRVLDQRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPAYLNALA 121
Query: 121 GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF 180
G GVHIVT++DYLAKRD+EWM ++ +LGL +GV + ++ ++ +Y ADITYGTNNEF
Sbjct: 122 GNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGVILATMTPDERRVAYNADITYGTNNEF 181
Query: 181 GFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINP 240
GFDYLRDNM + +D VQR ++ ARTPLIISG + ++ +
Sbjct: 182 GFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSILIDEARTPLIISGPADGASNWYTEFARL 241
Query: 241 IPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENILIKM---ALR 297
P L+ + G +++ +Q+ + +N YE + L+ AL+
Sbjct: 242 AP-LMEKDVHYEVDLRKRTVGVHEKG---VEFVEDQLGI-DNLYEAANSPLVSYLNNALK 296
Query: 298 AHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASI 357
A L VDEFTGR++ RR+ EG+HQA+EAKE++EI+ E QTLA+I
Sbjct: 297 AKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRRYNEGMHQAIEAKEHVEIKAENQTLATI 356
Query: 358 TFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKY 417
T QNYFR+Y K++GMTGTA+TEA E EIYKL +++P N R+D D IYKT E KY
Sbjct: 357 TLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGVVSIPTNMPMIREDQSDLIYKTEEAKY 416
Query: 418 QAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAG 477
A++ D+ Y K QPVL+GTTS+E SE LS K +PH+VLNAK H+ EA IIA AG
Sbjct: 417 IAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEATIIAVAG 476
Query: 478 HPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWM----LLH 533
+T+ATNMAGRGTDI+LGGN+D ++ D W ++
Sbjct: 477 RRGGVTVATNMAGRGTDIVLGGNVD-FLTDQRLRERGLDPVETPEEYEAA-WHSELPIVK 534
Query: 534 DK-------VISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXX 586
++ VI +GGL+++GTERHESRRIDNQLRGRSGRQGDPG SR
Sbjct: 535 EEASKEAKEVIEAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDELMRRF 594
Query: 587 XXXQIKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKI 646
++ ++ +L +P IE+ + + +I+SAQ ++E +NF++RK +L+YD++ N QRK+
Sbjct: 595 NGAALETLLTRLNLPDDVPIEAKMVTRAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKV 654
Query: 647 ICQERNKLLESKNISE-IIKILRYDVLIRLFSKYISLKKSDKEWDIIGLELILK 699
I ER ++LE +N+ + + ++R DV I + + + ++WD+ L LK
Sbjct: 655 IYAERRRILEGENLKDQALDMVR-DV-ITAYVDGATGEGYAEDWDLDALWTALK 706
Score = 154 (59.3 bits), Expect = 2.4e-155, Sum P(2) = 2.4e-155
Identities = 28/60 (46%), Positives = 43/60 (71%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
RN++L ID+ W EHL +D L++GI LR+ AQ+DP EY+RE + +F ML+ +K E++
Sbjct: 768 RNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPLVEYQREGYDMFMAMLDGMKEESV 827
>TIGR_CMR|GSU_2050 [details] [associations]
symbol:GSU_2050 "preprotein translocase, SecA subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 OMA:ERFFILQ ProtClustDB:PRK12904
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR004027
InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767 SUPFAM:SSF81886
TIGRFAMs:TIGR00963 PROSITE:PS51196 HOGENOM:HOG000218168 HSSP:P43803
RefSeq:NP_953099.1 ProteinModelPortal:Q74BJ1 SMR:Q74BJ1
GeneID:2686041 KEGG:gsu:GSU2050 PATRIC:22026961
BioCyc:GSUL243231:GH27-1960-MONOMER Uniprot:Q74BJ1
Length = 897
Score = 1333 (474.3 bits), Expect = 1.5e-153, Sum P(2) = 1.5e-153
Identities = 273/521 (52%), Positives = 347/521 (66%)
Query: 2 SFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSI 61
+ + KI GS+N+R LK+ +V+KIN LES + L+D++L+ +T + K+ I GE+L+S+
Sbjct: 4 AIIKKIVGSKNERELKRMWPVVEKINGLESQVAGLTDDQLREKTFEFKERIARGESLESL 63
Query: 62 LPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSG 121
LP+AF+VCRE KR L MRHFDVQLIGG+ LH G I+EM+TGEGKTLVATL AYLN+L+G
Sbjct: 64 LPEAFAVCREGGKRALGMRHFDVQLIGGMVLHQGKIAEMKTGEGKTLVATLPAYLNALTG 123
Query: 122 QGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFG 181
+GVH+VT++DYLA+RD+EWM LY +LGL++GV I ++ +Y ADITYGTNNEFG
Sbjct: 124 RGVHVVTVNDYLARRDSEWMGRLYRFLGLTVGVIVHGIDDDERRAAYAADITYGTNNEFG 183
Query: 182 FDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPI 241
FDYLRDNM F D VQR F ARTPLIISG +++ +Y I I
Sbjct: 184 FDYLRDNMKFALEDYVQRPFFFSIVDEVDSILIDEARTPLIISGPTEDSTDKYYIIDRII 243
Query: 242 PKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENIL---------- 291
P L E GD+ +D + LTE G K E +L
Sbjct: 244 PHLKKGEVKEVEANTLSGKRKVYTGDFTVDEKARSSSLTEEGVAKVEKLLKIDNLYDPRH 303
Query: 292 ------IKMALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENL 345
+ ALRAH L VDEFTGRLM RRW++GLHQA+EAKE +
Sbjct: 304 MEILHHVNQALRAHALFRRDVDYVVKDGEVIIVDEFTGRLMPGRRWSDGLHQAIEAKEGV 363
Query: 346 EIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDL 405
EI+NE QTLA+ITFQNYFRMY+K+SGMTGTA+TEA EF +IYKLE +P N+ R D
Sbjct: 364 EIENENQTLATITFQNYFRMYEKLSGMTGTADTEAEEFHKIYKLEVTVIPTNRPLLRPDF 423
Query: 406 QDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQ 465
D IYKT EK+ A++ +IK C+ K QP LVGT SIE SE+L+ IL+K +PH+VLNAKQ
Sbjct: 424 PDVIYKTEREKFNAVIEEIKGCHEKGQPTLVGTISIEKSEVLAEILRKQGIPHNVLNAKQ 483
Query: 466 HKLEAQIIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIK 506
H+ EA+I+AQAG M+TIATNMAGRGTDI+LGGN + K
Sbjct: 484 HEREAEIVAQAGRKGMVTIATNMAGRGTDILLGGNPEGLAK 524
Score = 1001 (357.4 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 213/426 (50%), Positives = 276/426 (64%)
Query: 281 ENGYE-KYENIL--IKMALRAHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQ 337
+N Y+ ++ IL + ALRAH L VDEFTGRLM RRW++GLHQ
Sbjct: 296 DNLYDPRHMEILHHVNQALRAHALFRRDVDYVVKDGEVIIVDEFTGRLMPGRRWSDGLHQ 355
Query: 338 ALEAKENLEIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPN 397
A+EAKE +EI+NE QTLA+ITFQNYFRMY+K+SGMTGTA+TEA EF +IYKLE +P N
Sbjct: 356 AIEAKEGVEIENENQTLATITFQNYFRMYEKLSGMTGTADTEAEEFHKIYKLEVTVIPTN 415
Query: 398 KINKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLP 457
+ R D D IYKT EK+ A++ +IK C+ K QP LVGT SIE SE+L+ IL+K +P
Sbjct: 416 RPLLRPDFPDVIYKTEREKFNAVIEEIKGCHEKGQPTLVGTISIEKSEVLAEILRKQGIP 475
Query: 458 HSVLNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIILGGNIDSYIKDXXXXXXXXXX 517
H+VLNAKQH+ EA+I+AQAG M+TIATNMAGRGTDI+LGGN + K
Sbjct: 476 HNVLNAKQHEREAEIVAQAGRKGMVTIATNMAGRGTDILLGGNPEGLAKQWRRANPDAPE 535
Query: 518 XXXXXXXXXXXWMLL--HDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXX 575
+ HD+V++ GGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSR
Sbjct: 536 EEYEKVLAEYRTLCAREHDEVVALGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRFY 595
Query: 576 XXXXXXXXXXXXXXQIKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLE 635
++ +M+ LKI +G++I + + +IE+AQ+K+E NF+IRK L+E
Sbjct: 596 LSLEDDLLRIFGSERVSKIMDFLKIEEGEAITHGMITKAIENAQKKVEAHNFEIRKHLIE 655
Query: 636 YDDIYNNQRKIICQERNKLLESKNISEIIKILRYDVLIRLFSKYISLKKSDKEWD--IIG 693
YDD+ N QR++I +R ++L ++I + D + + S I K S EWD IG
Sbjct: 656 YDDVMNKQREVIYTQRREILAGQDIRRHFTQMMDDTIEEISSFAIE-KVSAHEWDWQSIG 714
Query: 694 LELILK 699
E ILK
Sbjct: 715 -EGILK 719
Score = 186 (70.5 bits), Expect = 1.5e-153, Sum P(2) = 1.5e-153
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 752 IILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAIKK 811
I+LQ+ID W +HLLS+D L++GI LR Y QKDPK+EYK+EA++LF M+ I E ++K
Sbjct: 771 IMLQTIDAQWKDHLLSIDHLKEGIGLRGYGQKDPKQEYKKEAYQLFMDMMARIAAETVEK 830
Query: 812 IMTI 815
I +
Sbjct: 831 IFWV 834
Score = 53 (23.7 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 597 KLKIPKGKSIESNLA-SYSI--ESAQRKIELRNFDIR 630
K +I +G+S+ES L ++++ E +R + +R+FD++
Sbjct: 51 KERIARGESLESLLPEAFAVCREGGKRALGMRHFDVQ 87
>TIGR_CMR|DET_0434 [details] [associations]
symbol:DET_0434 "preprotein translocase, SecA subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0009306
"protein secretion" evidence=ISS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=ISS] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR020937 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
GO:GO:0046872 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0017038
HSSP:P10408 eggNOG:COG0653 KO:K03070 OMA:ERFFILQ
ProtClustDB:PRK12904 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_181178.1 ProteinModelPortal:Q3Z9C1
STRING:Q3Z9C1 GeneID:3230233 KEGG:det:DET0434 PATRIC:21607937
BioCyc:DETH243164:GJNF-434-MONOMER Uniprot:Q3Z9C1
Length = 952
Score = 864 (309.2 bits), Expect = 3.8e-152, Sum P(5) = 3.8e-152
Identities = 174/356 (48%), Positives = 242/356 (67%)
Query: 318 VDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITFQNYFRMYKKISGMTGTAE 377
+DEFTGR+M RR++EGLHQA+EAKE+++IQ E++T A++T QN FRMY+K+ GMTGTA
Sbjct: 399 IDEFTGRMMLGRRYSEGLHQAIEAKEHVKIQQESKTYATVTIQNLFRMYRKLCGMTGTAA 458
Query: 378 TEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVG 437
TEA EF +IYKLE + +P NK R+D D+IYK K++A++ +I +PVLVG
Sbjct: 459 TEAEEFSKIYKLEVVIIPTNKPAIREDYGDQIYKDQSAKFKAVVNEINEMRNLGRPVLVG 518
Query: 438 TTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIIL 497
T SIENSE+LSN+LK+ + H VLNAKQH+ EAQ++A+AG P +T+ATNMAGRG DI+L
Sbjct: 519 TVSIENSEMLSNMLKRQGIEHKVLNAKQHEKEAQVVAEAGKPGAVTVATNMAGRGVDILL 578
Query: 498 GGNIDSYIKDXXXXXXXXXXXXXXXXXXXXXWMLLHDKVISSGGLHIIGTERHESRRIDN 557
GG KD W + H +V+ +GGLH+IGTERHESRRIDN
Sbjct: 579 GGKEPP--KDDDKAYSQ--------------WQVHHQQVLEAGGLHVIGTERHESRRIDN 622
Query: 558 QLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIVMEKLKIPKGKSIESNLASYSIES 617
QLRGRSGRQGDPGSSR +I+ +ME + + IE+ L S ++E+
Sbjct: 623 QLRGRSGRQGDPGSSRFYVALDDDIMRRFGSERIQGIMEWAGMDENTPIENGLVSRTLEN 682
Query: 618 AQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKLLESKNI-SEIIKILRYDVL 672
AQ+++E +FD+RK L+EYDD+ N R++I ER K+L ++ S I+ ++R +++
Sbjct: 683 AQKRVEGYHFDVRKHLVEYDDVVNKHREVIYAERRKILLGADLKSNILDMIREEIM 738
Score = 351 (128.6 bits), Expect = 3.8e-152, Sum P(5) = 3.8e-152
Identities = 69/151 (45%), Positives = 100/151 (66%)
Query: 4 LTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQ--SIHSGETLDSI 61
L + F + +LK ++ E + L+ + L + S+ L++I
Sbjct: 52 LKETFETTASAILKDIAGTTAELEEAQKTADNSKQSRLKAKLESLNKDLSVKENAALNAI 111
Query: 62 LPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSG 121
LP+AF+ REAS+R + +RH+DVQLIGG+ LH+G I+EM+TGEGKTLVATL YLNSL G
Sbjct: 112 LPEAFAAVREASRRTIGLRHYDVQLIGGMVLHHGKIAEMRTGEGKTLVATLPLYLNSLLG 171
Query: 122 QGVHIVTISDYLAKRDAEWMSVLYNWLGLSI 152
+GVH+VT++DYLA+RDA WM +Y+ LG+S+
Sbjct: 172 KGVHLVTVNDYLARRDAYWMGPVYHALGVSV 202
Score = 150 (57.9 bits), Expect = 3.8e-152, Sum P(5) = 3.8e-152
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 164 KKKSYEADITYGTNNEFGFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLII 223
++++Y+ADITYGT+ EFGFDYLRDN+ + VQR++N+ ARTPLII
Sbjct: 241 RQEAYKADITYGTSTEFGFDYLRDNLRPDLAQCVQREMNYAIVDEIDNLLIDEARTPLII 300
Query: 224 SGEIKNNAQYFYKIINPI-PKL 244
S A Y++ + P+L
Sbjct: 301 SAP-DTEAGKLYEVFARLAPRL 321
Score = 134 (52.2 bits), Expect = 3.8e-152, Sum P(5) = 3.8e-152
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAI 809
R I+L ++D W+EHL ++ LR+ I L+++AQ+DP YK E F ++L IK++ +
Sbjct: 814 RIIMLHTLDSLWVEHLTIMENLRREIGLQAFAQRDPLIAYKNEGHVRFQELLETIKHDVV 873
Query: 810 KKIMTI 815
I +
Sbjct: 874 HNIYRV 879
Score = 94 (38.1 bits), Expect = 3.1e-125, Sum P(5) = 3.1e-125
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 8 FGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSI-HSGETLDSILPK 64
FG N++ ++ + +V KIN+LES LSDE L+ +T++ K+ + + ET S + K
Sbjct: 8 FGDSNEKEIRALEPLVDKINQLESSFSALSDEALKAKTAEFKERLKETFETTASAILK 65
Score = 43 (20.2 bits), Expect = 0.00094, Sum P(3) = 0.00094
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 365 MYKKISGMTGTAETE--AYE--FQEIYKLET-ITVPPNKINKRK--DLQDKIYKTMEEKY 417
M+K SG + E E A E +I +LE+ + ++ K K + ++++ +T E
Sbjct: 1 MFKFFSGFGDSNEKEIRALEPLVDKINQLESSFSALSDEALKAKTAEFKERLKETFETTA 60
Query: 418 QAILMDI 424
AIL DI
Sbjct: 61 SAILKDI 67
Score = 42 (19.8 bits), Expect = 3.8e-152, Sum P(5) = 3.8e-152
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 267 DYIIDYETNQVFLTENGYEKYENIL 291
DY I+ + LTE+G+ E +L
Sbjct: 326 DYEINEKDRNAELTEDGWANVEKLL 350
Score = 37 (18.1 bits), Expect = 8.1e-09, Sum P(3) = 8.1e-09
Identities = 6/15 (40%), Positives = 13/15 (86%)
Query: 616 ESAQRKIELRNFDIR 630
E+++R I LR++D++
Sbjct: 121 EASRRTIGLRHYDVQ 135
>UNIPROTKB|Q7WWK0 [details] [associations]
symbol:secA "Protein translocase subunit SecA" species:1318
"Streptococcus parasanguinis" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0046872
GO:GO:0065002 GO:GO:0017038 Gene3D:1.10.3060.10 Gene3D:3.90.1440.10
InterPro:IPR004027 InterPro:IPR014018 Pfam:PF02810 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196 EMBL:AY333118
ProteinModelPortal:Q7WWK0 SMR:Q7WWK0 IntAct:Q7WWK0 Uniprot:Q7WWK0
Length = 838
Score = 1071 (382.1 bits), Expect = 1.8e-150, Sum P(3) = 1.8e-150
Identities = 227/506 (44%), Positives = 319/506 (63%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS 60
M+ L K ++ +K+ +K+ K+ E M L+D+EL+ +T + KQ GE+LD
Sbjct: 1 MANLLKTIIENDRGEIKRLEKMADKVFSYEEQMAALTDDELKAKTVEFKQRYQDGESLDD 60
Query: 61 ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS 120
+L +AF+V RE +KRVL + + VQ++GGI LH+G++ EM+TGEGKTL AT+ YLN+LS
Sbjct: 61 LLYEAFAVVREGAKRVLGLFPYKVQVMGGIVLHHGDVPEMRTGEGKTLTATMPVYLNALS 120
Query: 121 GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF 180
G+GVH+VT+++YL +RDA M LY+WLGLS+G+N + S + KK++Y DITY TN+E
Sbjct: 121 GKGVHVVTVNEYLTERDATEMGELYSWLGLSVGINLAAKSPAEKKEAYLCDITYSTNSEI 180
Query: 181 GFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINP 240
GFDYLRDNMV + + VQR LN+ ARTPLI+SG+ ++ Y + +
Sbjct: 181 GFDYLRDNMVVRAENMVQRPLNYALVDEVDSILIDEARTPLIVSGQTASDTSQLYHMADA 240
Query: 241 IPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENI----LIKMAL 296
K L E G ID + F EN Y+ EN+ I AL
Sbjct: 241 YVKTLT-EDDYIIDVPSKTIGLSDSG---ID-KAESYFNLENLYD-IENVALTHFIDNAL 294
Query: 297 RA-HVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLA 355
RA +++ VD+FTGR M+ RR+++GLHQA+EAKE + +Q ET+T A
Sbjct: 295 RANYIMILDIDYVVSEDQEILIVDQFTGRTMEGRRYSDGLHQAIEAKEGVPVQEETKTSA 354
Query: 356 SITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEE 415
SIT+QN FRMYKK+SGMTGT +TE EF+EIY + I +P N+ R D D +Y +++
Sbjct: 355 SITYQNLFRMYKKLSGMTGTGKTEEEEFREIYNIRVIPIPTNRPIARIDHPDLLYPSLKS 414
Query: 416 KYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQ 475
K++A++ D+K+ + K QPVLVGT ++E S+ LS +L + +PH VLNAK H EAQII
Sbjct: 415 KFKAVVEDVKSRHEKGQPVLVGTVAVETSDYLSQLLVQAGVPHEVLNAKNHYKEAQIIMN 474
Query: 476 AGHPKMITIATNMAGRGTDIILGGNI 501
AG +TIATNMAGRGTDI LG +
Sbjct: 475 AGQRGAVTIATNMAGRGTDIKLGEGV 500
Score = 290 (107.1 bits), Expect = 1.8e-150, Sum P(3) = 1.8e-150
Identities = 61/138 (44%), Positives = 90/138 (65%)
Query: 532 LHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQI 591
L + V GGL +IGTERHESRRIDNQLRGRSGRQGDPG S+ +I
Sbjct: 496 LGEGVRELGGLCVIGTERHESRRIDNQLRGRSGRQGDPGESQFYLSLEDELMRRFGSERI 555
Query: 592 KIVMEKLKIPKGKS-IESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQE 650
K V+++ K+ + +S I SN+ + +E AQ+++E N+D RKQ+L+YDD+ QR+II E
Sbjct: 556 KAVLDRFKLSEEESVIRSNMFTRQVEGAQKRVEGNNYDTRKQVLQYDDVMREQREIIYAE 615
Query: 651 RNKLLES-KNISEIIKIL 667
R ++ + ++++ IK +
Sbjct: 616 RYDVITANRDLAPEIKAM 633
Score = 144 (55.7 bits), Expect = 1.8e-150, Sum P(3) = 1.8e-150
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 752 IILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAIKK 811
+IL+ +D W +H+ +LDQLR + LR YAQ +P EY+ E+F++F+ M+ I+++ +
Sbjct: 716 LILRVVDSKWTDHIDALDQLRNAVGLRGYAQNNPVVEYQSESFRMFNDMIGSIEFDVTRL 775
Query: 812 IM 813
+M
Sbjct: 776 MM 777
Score = 44 (20.5 bits), Expect = 1.5e-124, Sum P(3) = 1.5e-124
Identities = 16/70 (22%), Positives = 35/70 (50%)
Query: 602 KGKSIES--NLASYSI--ESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERNKLLES 657
K + IE+ N A Y++ E + ++ K++++Y +Y +I + KL +
Sbjct: 650 KEERIEAILNFAKYNLVPEDTISESDIEGKS-DKEVIDY--LYARAEEIYASQVAKLRDE 706
Query: 658 KNISEIIKIL 667
+++ E K+L
Sbjct: 707 ESVQEFQKVL 716
Score = 44 (20.5 bits), Expect = 1.5e-124, Sum P(3) = 1.5e-124
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 611 ASYSIESAQRKIE-LRNFD----IRKQLLEYDDIYNNQRKIICQERNKLLESKNISEIIK 665
AS+S S + +IE + NF + + + DI K + E S++ K
Sbjct: 645 ASHS--SKEERIEAILNFAKYNLVPEDTISESDIEGKSDKEVIDYLYARAEEIYASQVAK 702
Query: 666 ILRYDVLIRLFSKYISLKKSDKEW 689
LR + ++ F K + L+ D +W
Sbjct: 703 -LRDEESVQEFQKVLILRVVDSKW 725
Score = 38 (18.4 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 160 SHSLKKKSYEADITYGTNNEFGFDYLRDNMVFNSNDR 196
SHS K++ EA + + N D + ++ + +D+
Sbjct: 646 SHSSKEERIEAILNFAKYNLVPEDTISESDIEGKSDK 682
>TIGR_CMR|BA_0882 [details] [associations]
symbol:BA_0882 "preprotein translocase, SecA subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0009306 "protein
secretion" evidence=ISS] [GO:0015450 "P-P-bond-hydrolysis-driven
protein transmembrane transporter activity" evidence=ISS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0017038
eggNOG:COG0653 HOGENOM:HOG000218169 KO:K03070 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
RefSeq:NP_843394.1 RefSeq:YP_017518.1 RefSeq:YP_027114.1
HSSP:P28366 ProteinModelPortal:Q81UI7 IntAct:Q81UI7 DNASU:1088471
EnsemblBacteria:EBBACT00000009335 EnsemblBacteria:EBBACT00000014039
EnsemblBacteria:EBBACT00000020428 GeneID:1088471 GeneID:2818591
GeneID:2848526 KEGG:ban:BA_0882 KEGG:bar:GBAA_0882 KEGG:bat:BAS0838
OMA:FGIDNLY ProtClustDB:PRK09200 BioCyc:BANT260799:GJAJ-918-MONOMER
BioCyc:BANT261594:GJ7F-948-MONOMER Uniprot:Q81UI7
Length = 788
Score = 1049 (374.3 bits), Expect = 2.4e-142, Sum P(3) = 2.4e-142
Identities = 223/504 (44%), Positives = 313/504 (62%)
Query: 1 MSFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDS 60
++ + K+ G +R LKKY+++VQ+IN LE + LSDEEL+++T K + G+T+D
Sbjct: 2 LNSVKKLLGDSQKRKLKKYEQLVQEINNLEEKLSDLSDEELRHKTITFKDMLRDGKTVDD 61
Query: 61 ILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLS 120
I +AF+V REA+KRVL +RH+DVQLIGG+ L GNI+EM TGEGKTLV++L Y+ +L
Sbjct: 62 IKVEAFAVVREAAKRVLGLRHYDVQLIGGLVLLEGNIAEMPTGEGKTLVSSLPTYVRALE 121
Query: 121 GQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEF 180
G+GVH++T++DYLAKRD E + ++ +LGL +G+N +I S KK +YEADITYG EF
Sbjct: 122 GKGVHVITVNDYLAKRDKELIGQVHEFLGLKVGLNIPQIDPSEKKLAYEADITYGIGTEF 181
Query: 181 GFDYLRDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINP 240
GFDYLRDNM + N++VQR +F A+TPLII+G+ +++ Y
Sbjct: 182 GFDYLRDNMAASKNEQVQRPYHFAIIDEIDSVLIDEAKTPLIIAGKKSSSSDLHYLCAKV 241
Query: 241 IPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYE-KYENILIKM--ALR 297
I + D I E +F +N Y+ +++ + M ALR
Sbjct: 242 IKSF---QDTLHYTYDAESKSASFTEDGITKIE--DLFDIDNLYDLEHQTLYHYMIQALR 296
Query: 298 AHVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASI 357
AHV VD FTGR+M R ++GLHQALEAKE LEI E QT ASI
Sbjct: 297 AHVAFQCDVDYIVHDEKILLVDIFTGRVMDGRSLSDGLHQALEAKEGLEITEENQTQASI 356
Query: 358 TFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKY 417
T QN+FRMY +SGMTGTA+TE EF +Y +E + +P N+ R+D +D +Y T + KY
Sbjct: 357 TIQNFFRMYPALSGMTGTAKTEEKEFNRVYNMEVMPIPTNRPIIREDKKDVVYVTADAKY 416
Query: 418 QAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAG 477
+A+ D+ + +P+L+GT SI SE ++ L + N+ + +LNAK + EA +IA AG
Sbjct: 417 KAVREDVLKHNKQGRPILIGTMSILQSETVARYLDEANITYQLLNAKSAEQEADLIATAG 476
Query: 478 HPKMITIATNMAGRGTDIILGGNI 501
ITIATNMAGRGTDI+LG +
Sbjct: 477 QKGQITIATNMAGRGTDILLGEGV 500
Score = 262 (97.3 bits), Expect = 2.4e-142, Sum P(3) = 2.4e-142
Identities = 66/174 (37%), Positives = 96/174 (55%)
Query: 530 MLLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXX 589
+LL + V GGLH+IGTERHESRR+DNQL+GR+GRQGDPGSS+
Sbjct: 494 ILLGEGVHELGGLHVIGTERHESRRVDNQLKGRAGRQGDPGSSQFFLSLEDEMLKRFAQE 553
Query: 590 QIKIVMEKLKIPK-GKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIIC 648
+++ + + LK + G + S + + + Q E +F +R+ L+ DD+ N+QR +I
Sbjct: 554 EVEKLTKSLKTDETGLILTSKVHDF-VNRTQLICEGSHFSMREYNLKLDDVINDQRNVIY 612
Query: 649 QERNKLL-ESKNISEIIKILRYDVLIRLFSK-YISLKKSDKEWDIIGLELILKK 700
+ RN LL E N+ EII I D + SK Y+ +EWD L L +
Sbjct: 613 KLRNNLLQEDTNMIEII-IPMIDHAVEAISKQYLVEGMLPEEWDFASLTASLNE 665
Score = 117 (46.2 bits), Expect = 2.4e-142, Sum P(3) = 2.4e-142
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLF 797
R + L +D+ W+ HL ++ L++GI LR Y Q+DP R Y++EA +F
Sbjct: 715 RYVALHFLDQNWVNHLDAMTHLKEGIGLRQYQQEDPTRLYQKEALDIF 762
Score = 55 (24.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 41 LQNQTSKLKQSIHSGETLDSILPKAFSVCREASKRVLKM-RHFDVQL-IGGIALHY 94
++N S ++HS E L S+L + S+ +E RV ++ + D+Q + +ALH+
Sbjct: 669 VENMPSLSANNVHSPEDLQSVLKETLSLYKE---RVNELDSNTDLQQSLRYVALHF 721
>UNIPROTKB|Q7WUF6 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA"
species:1318 "Streptococcus parasanguinis" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR022490 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0065002
EMBL:DQ990875 GO:GO:0017038 GO:GO:0015450 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 TIGRFAMs:TIGR00963 PROSITE:PS51196
TIGRFAMs:TIGR03714 EMBL:AY338765 IntAct:Q7WUF6 Uniprot:Q7WUF6
Length = 798
Score = 852 (305.0 bits), Expect = 5.1e-112, Sum P(3) = 5.1e-112
Identities = 193/497 (38%), Positives = 284/497 (57%)
Query: 12 NQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILPKAFSVCRE 71
N L++ +K + KIN L+ M LSDEEL+ +T + + +H GETL+ IL +AF+ RE
Sbjct: 12 NTMKLRRLRKKLVKINALKETMSLLSDEELKQKTVEFRNRLHEGETLEDILIEAFAAIRE 71
Query: 72 ASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQGVHIVTISD 131
A +R+L M FDVQ++G +ALH G I EM+TGEGKTL ATL YLN+L G+G +VT +D
Sbjct: 72 ADRRILGMFPFDVQVLGALALHEGTIVEMKTGEGKTLTATLPLYLNALEGKGTILVTTND 131
Query: 132 YLAKRDAEWMSVLYNWLGLSIGV----NSSEISHSLKKKSYEADITYGTNNEFGFDYLRD 187
YLA+RDA M +Y ++GL++GV + E+ + KKK Y +DI Y T+ GFDYL D
Sbjct: 132 YLARRDAIDMGEVYRFMGLTVGVGVFDDDEEVDSNRKKKIYSSDILYTTSTALGFDYLID 191
Query: 188 NMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPKLLVP 247
N+ N D+ R N+V A+TPLII+G + + Y + + L
Sbjct: 192 NLAGNVEDKFLRSFNYVIVDEADAVLLDSAQTPLIIAGSPRVQSN-LYDTADQFIRTLKK 250
Query: 248 EXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGY-EKY-E-NILIKMALRAHVLXXX 304
+ G I Y + F N Y E+Y E N I +ALRAH L
Sbjct: 251 DQEFKFLKDEKFIFLTDEG---IRY-AEKYFNIPNLYSEEYFELNRHINLALRAHYLFKK 306
Query: 305 XXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITFQNYFR 364
+D TGR+++ R G+HQA+E KE ++ +++ +AS+T+Q+ F
Sbjct: 307 DMDYVVTDDAVELLDNRTGRILEGTRLQSGIHQAIETKEKVKKSKDSRAIASVTYQSLFN 366
Query: 365 MYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQAILMDI 424
M+ K+SGMTGT + E Y + + +P N +R D DKIY T+ EK A L +
Sbjct: 367 MFPKLSGMTGTGKIAENELISTYGVSVVVLPTNTPIQRLDYSDKIYTTLPEKLLATLEFV 426
Query: 425 KNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGHPKMITI 484
K + K+QP+L+ + +++ +E+ S +L + +PH+VL AK EA IIA+AG +T+
Sbjct: 427 KELHEKQQPILLISGTVDIAEIYSRMLLQEGIPHNVLTAKNIAKEALIIAEAGQKGAVTV 486
Query: 485 ATNMAGRGTDIILGGNI 501
AT++AGRGTDI LG +
Sbjct: 487 ATSLAGRGTDIKLGKGV 503
Score = 174 (66.3 bits), Expect = 5.1e-112, Sum P(3) = 5.1e-112
Identities = 54/151 (35%), Positives = 80/151 (52%)
Query: 536 VISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIKIVM 595
V GGL +IGTER + RID QLRGR+GRQGDPG S+ ++K
Sbjct: 503 VAELGGLAVIGTERMPNSRIDWQLRGRAGRQGDPGLSQFFVSLEDDLIMNHANRRLKKYF 562
Query: 596 EKLK-IPK---GKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQER 651
EK I + GK + S S + AQ+K E ++ R+ +++D+ +QRK I R
Sbjct: 563 EKQNSIDRKNYGKPLFSKRFSRIVTHAQQKSEDKSESARQNTIKFDESLKSQRKKIYHLR 622
Query: 652 NKLLESKNISEIIKILRYDVLIRLFSKYISL 682
++L+ + +K LR D L +L S+YI +
Sbjct: 623 DQLIFGE-----VK-LR-DRLDKLISEYIEM 646
Score = 114 (45.2 bits), Expect = 5.1e-112, Sum P(3) = 5.1e-112
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 753 ILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAIKKI 812
IL++ID+ WI+ + L QL+ +++R AQ+D EY RE+ + + +M +K+ +K +
Sbjct: 721 ILRAIDECWIQQVDHLQQLKTFVSMRQIAQRDSFNEYLRESLESYEEMSREVKHAIVKNV 780
Query: 813 M 813
M
Sbjct: 781 M 781
>UNIPROTKB|Q3S2Y3 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA"
species:1311 "Streptococcus agalactiae" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011116 InterPro:IPR011130
InterPro:IPR022490 Pfam:PF01043 Pfam:PF07516 Pfam:PF07517
PRINTS:PR00906 SMART:SM00957 SMART:SM00958 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006605 GO:GO:0065002
EMBL:DQ174691 GO:GO:0017038 GO:GO:0015450 Gene3D:1.10.3060.10
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
SUPFAM:SSF81886 PROSITE:PS51196 IntAct:Q3S2Y3 TIGRFAMs:TIGR03714
Uniprot:Q3S2Y3
Length = 798
Score = 848 (303.6 bits), Expect = 7.2e-109, Sum P(3) = 7.2e-109
Identities = 195/496 (39%), Positives = 286/496 (57%)
Query: 12 NQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILPKAFSVCRE 71
N+ L++ QKIV +IN + +LSD+EL +QT LK + SGE+LD IL AF+V RE
Sbjct: 14 NKLRLQRIQKIVNEINNKKVYYAQLSDKELSHQTLILKNRLSSGESLDDILVDAFAVIRE 73
Query: 72 ASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQGVHIVTISD 131
A+KR+L + +D Q++G IALH G I+EM+TGEGKTL AT+ YLN+L+ +G +VT +D
Sbjct: 74 ANKRILGLFPYDAQVMGAIALHQGTIAEMKTGEGKTLTATMPLYLNALTSKGAILVTTND 133
Query: 132 YLAKRDAEWMSVLYNWLGLSIGVN----SSEISHSLKKKSYEADITYGTNNEFGFDYLRD 187
YLAKRDA M +Y +LG+++G+N E ++K++ YE+DITY T GFDYL
Sbjct: 134 YLAKRDALEMGKVYQFLGMTVGINVFDKKEEADATIKREVYESDITYTTAGALGFDYLVH 193
Query: 188 NMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPKLLVP 247
N+ N ++ R +FV A+TPLII+G+ + + Y I N L
Sbjct: 194 NLASNKLEQFLRPFHFVIVDEADSVLLDIAQTPLIIAGDPRVQSN-LYGITNNFVLTLKE 252
Query: 248 EXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKY-E-NILIKMALRAHVLXXXX 305
G + Y ++E ++Y E N I +ALRAH L
Sbjct: 253 NDEYIHKAKDKIVYLTEKG---VSYAKQYFNISELYNDEYWELNRHINLALRAHCLYKRD 309
Query: 306 XXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITFQNYFRM 365
+D TGR+M+ + G+HQA+EAKE++ + NE++ +ASIT+Q+ F M
Sbjct: 310 YDYVVKNNEVKLLDNATGRVMEGTKLQSGIHQAIEAKEDVALTNESRAIASITYQSLFNM 369
Query: 366 YKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQAILMDIK 425
+ ++SGMTGT ++ E + Y L I +P N KR DL DKIY ++ EK QA + D+K
Sbjct: 370 FPRLSGMTGTGKSSEDELIKTYHLPVIVIPTNFPIKRVDLADKIYVSLPEKLQATIDDVK 429
Query: 426 NCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGHPKMITIA 485
+ K QPVL+ + ++E + + S +L + + H+ L A EAQII +AG +T A
Sbjct: 430 QRHSKGQPVLLISGTVEIANIYSKLLLREGIAHNTLTADNVVKEAQIIKEAGQKGSVTCA 489
Query: 486 TNMAGRGTDIILGGNI 501
T +AGRGTDI LG +
Sbjct: 490 TVLAGRGTDIKLGEGV 505
Score = 143 (55.4 bits), Expect = 7.2e-109, Sum P(3) = 7.2e-109
Identities = 45/144 (31%), Positives = 71/144 (49%)
Query: 532 LHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQI 591
L + V GGL +IGTER + R+D QLRGRSGRQGDPG S+ +
Sbjct: 501 LGEGVRELGGLAVIGTERMPNLRMDWQLRGRSGRQGDPGISQFYVSLEDELIVSHSPEWV 560
Query: 592 KIVMEKLKIPKGKSI----ESNLASYSI-ESAQRKIELRNFDIRKQLLEYDDIYNNQRKI 646
++K + + Y I ++AQ + E + R+Q +++ + QR+
Sbjct: 561 IKYLKKYSRKETSNYYMVPRKKRFFYQIVKNAQLRSEDKGVSSREQTIKFGESLRIQREN 620
Query: 647 ICQERNKLLESKNI--SEIIKILR 668
I Q RN+L+ +I +IKI++
Sbjct: 621 IYQLRNELIADSSIVVDGVIKIIQ 644
Score = 119 (46.9 bits), Expect = 7.2e-109, Sum P(3) = 7.2e-109
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 753 ILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLFHKMLNLIKYEAIKKI 812
IL++IDK WIE + SL QL+ + R Q+D +EY +E+ ++KM I+Y +K I
Sbjct: 721 ILKAIDKSWIEEVDSLQQLKGVVTNRGIGQRDIIQEYYKESLNSYYKMGKEIRYSIVKNI 780
Query: 813 M 813
M
Sbjct: 781 M 781
>UNIPROTKB|P66785 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA 2"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0043952 "protein transport by
the Sec complex" evidence=IMP] [GO:0044119 "growth of symbiont in
host cell" evidence=IMP] [GO:0051701 "interaction with host"
evidence=TAS] [GO:0052059 "evasion or tolerance by symbiont of
host-produced reactive oxygen species" evidence=TAS] [GO:0052553
"modulation by symbiont of host immune response" evidence=IMP]
[GO:0052572 "response to host immune response" evidence=TAS]
HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011116 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07516 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS01312 SMART:SM00957 SMART:SM00958 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005618 GO:GO:0006605
Reactome:REACT_116125 GO:GO:0009405 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0044119
GO:GO:0016887 EMBL:BX842577 GO:GO:0052059 GO:GO:0052553
TCDB:3.A.5.2.2 GO:GO:0017038 eggNOG:COG0653 KO:K03070
Gene3D:1.10.3060.10 Gene3D:3.90.1440.10 InterPro:IPR014018
SUPFAM:SSF81767 SUPFAM:SSF81886 PROSITE:PS51196
HOGENOM:HOG000218168 GO:GO:0043952 PIR:F70720 RefSeq:NP_216337.1
RefSeq:NP_336328.1 RefSeq:YP_006515221.1 ProteinModelPortal:P66785
SMR:P66785 PRIDE:P66785 EnsemblBacteria:EBMYCT00000003802
EnsemblBacteria:EBMYCT00000069126 GeneID:13316612 GeneID:885594
GeneID:923751 KEGG:mtc:MT1869 KEGG:mtu:Rv1821 KEGG:mtv:RVBD_1821
PATRIC:18125881 TubercuList:Rv1821 OMA:HRNTWRY ProtClustDB:PRK12326
InterPro:IPR026389 TIGRFAMs:TIGR04221 Uniprot:P66785
Length = 808
Score = 672 (241.6 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 164/502 (32%), Positives = 260/502 (51%)
Query: 6 KIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHSGETLDSILPKA 65
++ G+ ++ + V E + LSDE+L+ L E+ D +P+
Sbjct: 48 RLLGASTEKNRSRSLADVTASAEYDKEAADLSDEKLRKAAGLLNLD-DLAESAD--IPQF 104
Query: 66 FSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATLAAYLNSLSGQGVH 125
++ REA++R +R FDVQL+G + + G++ EM TGEGKTL +AA +L+G+ VH
Sbjct: 105 LAIAREAAERRTGLRPFDVQLLGALRMLAGDVIEMATGEGKTLAGAIAAAGYALAGRHVH 164
Query: 126 IVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADITYGTNNEFGFDYL 185
+VTI+DYLA+RDAEWM L + +GL++G +++ + ++ +Y+ D+TY + NE GFD L
Sbjct: 165 VVTINDYLARRDAEWMGPLLDAMGLTVGWITADSTPDERRTAYDRDVTYASVNEIGFDVL 224
Query: 186 RDNMVFNSNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNNAQYFYKIINPIPKLL 245
RD +V + ND V + A PL+++G +II + +L+
Sbjct: 225 RDQLVTDVNDLVSPNPDVALIDEADSVLVDEALVPLVLAGTTHRETPRL-EIIRLVAELV 283
Query: 246 VPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKY--ENI---L--IKMALRA 298
+ ++ ++ +V G + Y E++ L + +AL A
Sbjct: 284 GDKDADEYFATDSDNRNV----HLTEHGARKVEKALGGIDLYSEEHVGTTLTEVNVALHA 339
Query: 299 HVLXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASIT 358
HVL ++ GR+ + +RW +GL A+EAKE +E + L +IT
Sbjct: 340 HVLLQRDVHYIVRDDAVHLINASRGRIAQLQRWPDGLQAAVEAKEGIETTETGEVLDTIT 399
Query: 359 FQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQ 418
Q Y + GMTGTA + ++ Y+L +PPNK N R+D D++Y T K
Sbjct: 400 VQALINRYATVCGMTGTALAAGEQLRQFYQLGVSPIPPNKPNIREDEADRVYITTAAKND 459
Query: 419 AILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGH 478
I+ I + + QPVLVGT + SE L L + +P VLNAK EA++IA+AG
Sbjct: 460 GIVEHITEVHQRGQPVLVGTRDVAESEELHERLVRRGVPAVVLNAKNDAEEARVIAEAGK 519
Query: 479 PKMITIATNMAGRGTDIILGGN 500
+T++T MAGRGTDI LGG+
Sbjct: 520 YGAVTVSTQMAGRGTDIRLGGS 541
Score = 203 (76.5 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 52/143 (36%), Positives = 71/143 (49%)
Query: 533 HDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXXQIK 592
HD+V GGLH++GT RH + R+DNQLRGR+GRQGDPGSS K
Sbjct: 546 HDRVAELGGLHVVGTGRHHTERLDNQLRGRAGRQGDPGSSVFFSSWEDDVVAANLDHN-K 604
Query: 593 IVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDDIYNNQRKIICQERN 652
+ M + G+ + S ++ AQR E R D+ Y+ + QR II + RN
Sbjct: 605 LPMATDE--NGRIVSPRTGSL-LDHAQRVAEGRLLDVHANTWRYNQLIAQQRAIIVERRN 661
Query: 653 KLLESKNISEIIKIL---RYDVL 672
LL + E + L RY+ L
Sbjct: 662 TLLRTVTAREELAELAPKRYEEL 684
Score = 88 (36.0 bits), Expect = 2.1e-93, Sum P(3) = 2.1e-93
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 750 RNIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPKREYKREAFKLF 797
R I+L +D+ W +HL L +R+ I+LR+ +++P E+ R A F
Sbjct: 698 RQIMLYHLDRGWADHLAYLADIRESIHLRALGRQNPLDEFHRMAVDAF 745
>UNIPROTKB|Q5LPY3 [details] [associations]
symbol:secA2 "Protein translocase subunit SecA 2"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_01382 InterPro:IPR000185
InterPro:IPR011115 InterPro:IPR011130 InterPro:IPR020937
Pfam:PF01043 Pfam:PF07517 PRINTS:PR00906 PROSITE:PS01312
SMART:SM00957 SMART:SM00958 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0006605 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0017038 eggNOG:COG0653 KO:K03070 Gene3D:3.90.1440.10
InterPro:IPR014018 SUPFAM:SSF81767 PROSITE:PS51196
HOGENOM:HOG000218168 RefSeq:YP_167923.1 HSSP:P0A5Y8
ProteinModelPortal:Q5LPY3 GeneID:3194324 KEGG:sil:SPO2713
PATRIC:23378841 OMA:RASTHLT ProtClustDB:PRK12898 Uniprot:Q5LPY3
Length = 652
Score = 603 (217.3 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 159/463 (34%), Positives = 229/463 (49%)
Query: 53 HSGETLDSILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATL 112
H GE L L ++F++ RE + R L RH+ Q++G A+ G ++EMQTGEGKTL TL
Sbjct: 85 HPGEAL---LVRSFALIRECAGRELGQRHYATQILGARAVLNGAVAEMQTGEGKTLAITL 141
Query: 113 AAYLNSLSGQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADI 172
AA +L+G+ VH++T +DYLA RDA+ M LY LGL+ + ++ ++ ADI
Sbjct: 142 AAGTAALAGRRVHVITANDYLAGRDADTMRGLYARLGLTCAAVEPGCTPEERRAAFAADI 201
Query: 173 TYGTNNEFGFDYLRDNMVFN--SNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNN 230
Y + E F +LRD + + D R F A I S I
Sbjct: 202 VYASGKEVAFTFLRDRVAMGGRAGDIGLRTRAFFDGTGLLLPGLQFAIVDEIDSVMIDEA 261
Query: 231 AQYFYKIINPIPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENI 290
I++ P E DY +D + V L+ NG ++ ++
Sbjct: 262 RTPL--ILSVPPADAEVEAEAARAAHAIAAELKEGRDYRLDRLRHAVELSRNGCDRLADL 319
Query: 291 LIKM------------ALRAHV----LXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEG 334
+M A+R + L VDEFTGR+M R W+ G
Sbjct: 320 AERMPPAWRPAPIREDAVRTAISAIRLHQRDEHYILRDGKVEIVDEFTGRIMPDRSWSAG 379
Query: 335 LHQALEAKENLEIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITV 394
LHQA+EAKE +EI + TLA ITFQ +FR Y + GMTGTA A EF +Y L + +
Sbjct: 380 LHQAVEAKEGVEITSRRVTLAQITFQRFFRRYIHLGGMTGTATEAADEFWSVYDLPVVRI 439
Query: 395 PPNKINKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKN 454
P +K ++R+ + ++ K+ + K +PVL+GT ++ SE S L
Sbjct: 440 PTHKRSRRRTWKTQVSTRAATKWARVAKRAKALSASGRPVLIGTRTVAASEAASAALHAL 499
Query: 455 NLPHSVLNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIIL 497
+PH VL+A Q EA ++A+AG +T+ATNMAGRGTDIIL
Sbjct: 500 GVPHRVLSAAQDADEAAVVAEAGRAGAVTVATNMAGRGTDIIL 542
Score = 146 (56.5 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 39/109 (35%), Positives = 54/109 (49%)
Query: 530 MLLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXX 589
++L + +GGLH+I TE+H SRRID QL GR+GRQGDPGS+
Sbjct: 540 IILDAEARKAGGLHVIMTEKHSSRRIDRQLAGRAGRQGDPGSTEAILSAEDSLLPEFGGR 599
Query: 590 QIKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDD 638
V G ++ S L AQR+ E + R++LLE D+
Sbjct: 600 YSSFVTRF----GGSAVLSALTD-----AQRRAERTHVAARRRLLELDE 639
>TIGR_CMR|SPO_2713 [details] [associations]
symbol:SPO_2713 "SecA DEAD domain protein/helicase,
putative" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] HAMAP:MF_01382 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011130 InterPro:IPR020937 Pfam:PF01043 Pfam:PF07517
PRINTS:PR00906 PROSITE:PS01312 SMART:SM00957 SMART:SM00958
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0006605
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0017038
eggNOG:COG0653 KO:K03070 Gene3D:3.90.1440.10 InterPro:IPR014018
SUPFAM:SSF81767 PROSITE:PS51196 HOGENOM:HOG000218168
RefSeq:YP_167923.1 HSSP:P0A5Y8 ProteinModelPortal:Q5LPY3
GeneID:3194324 KEGG:sil:SPO2713 PATRIC:23378841 OMA:RASTHLT
ProtClustDB:PRK12898 Uniprot:Q5LPY3
Length = 652
Score = 603 (217.3 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 159/463 (34%), Positives = 229/463 (49%)
Query: 53 HSGETLDSILPKAFSVCREASKRVLKMRHFDVQLIGGIALHYGNISEMQTGEGKTLVATL 112
H GE L L ++F++ RE + R L RH+ Q++G A+ G ++EMQTGEGKTL TL
Sbjct: 85 HPGEAL---LVRSFALIRECAGRELGQRHYATQILGARAVLNGAVAEMQTGEGKTLAITL 141
Query: 113 AAYLNSLSGQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIGVNSSEISHSLKKKSYEADI 172
AA +L+G+ VH++T +DYLA RDA+ M LY LGL+ + ++ ++ ADI
Sbjct: 142 AAGTAALAGRRVHVITANDYLAGRDADTMRGLYARLGLTCAAVEPGCTPEERRAAFAADI 201
Query: 173 TYGTNNEFGFDYLRDNMVFN--SNDRVQRKLNFVXXXXXXXXXXXXARTPLIISGEIKNN 230
Y + E F +LRD + + D R F A I S I
Sbjct: 202 VYASGKEVAFTFLRDRVAMGGRAGDIGLRTRAFFDGTGLLLPGLQFAIVDEIDSVMIDEA 261
Query: 231 AQYFYKIINPIPKLLVPEXXXXXXXXXXXXXXXXXGDYIIDYETNQVFLTENGYEKYENI 290
I++ P E DY +D + V L+ NG ++ ++
Sbjct: 262 RTPL--ILSVPPADAEVEAEAARAAHAIAAELKEGRDYRLDRLRHAVELSRNGCDRLADL 319
Query: 291 LIKM------------ALRAHV----LXXXXXXXXXXXXXXXXVDEFTGRLMKTRRWAEG 334
+M A+R + L VDEFTGR+M R W+ G
Sbjct: 320 AERMPPAWRPAPIREDAVRTAISAIRLHQRDEHYILRDGKVEIVDEFTGRIMPDRSWSAG 379
Query: 335 LHQALEAKENLEIQNETQTLASITFQNYFRMYKKISGMTGTAETEAYEFQEIYKLETITV 394
LHQA+EAKE +EI + TLA ITFQ +FR Y + GMTGTA A EF +Y L + +
Sbjct: 380 LHQAVEAKEGVEITSRRVTLAQITFQRFFRRYIHLGGMTGTATEAADEFWSVYDLPVVRI 439
Query: 395 PPNKINKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTTSIENSELLSNILKKN 454
P +K ++R+ + ++ K+ + K +PVL+GT ++ SE S L
Sbjct: 440 PTHKRSRRRTWKTQVSTRAATKWARVAKRAKALSASGRPVLIGTRTVAASEAASAALHAL 499
Query: 455 NLPHSVLNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIIL 497
+PH VL+A Q EA ++A+AG +T+ATNMAGRGTDIIL
Sbjct: 500 GVPHRVLSAAQDADEAAVVAEAGRAGAVTVATNMAGRGTDIIL 542
Score = 146 (56.5 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 39/109 (35%), Positives = 54/109 (49%)
Query: 530 MLLHDKVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSRXXXXXXXXXXXXXXXX 589
++L + +GGLH+I TE+H SRRID QL GR+GRQGDPGS+
Sbjct: 540 IILDAEARKAGGLHVIMTEKHSSRRIDRQLAGRAGRQGDPGSTEAILSAEDSLLPEFGGR 599
Query: 590 QIKIVMEKLKIPKGKSIESNLASYSIESAQRKIELRNFDIRKQLLEYDD 638
V G ++ S L AQR+ E + R++LLE D+
Sbjct: 600 YSSFVTRF----GGSAVLSALTD-----AQRRAERTHVAARRRLLELDE 639
>DICTYBASE|DDB_G0291406 [details] [associations]
symbol:DDB_G0291406 species:44689 "Dictyostelium
discoideum" [GO:0017038 "protein import" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006605 "protein targeting"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000185 InterPro:IPR011115
InterPro:IPR011130 Pfam:PF00023 Pfam:PF07517 PRINTS:PR00906
PROSITE:PS50088 SMART:SM00248 SMART:SM00957 dictyBase:DDB_G0291406
GO:GO:0005524 GO:GO:0006605 EMBL:AAFI02000177 GO:GO:0016020
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005622 GO:GO:0017038 eggNOG:COG0653
Gene3D:3.90.1440.10 InterPro:IPR014018 SUPFAM:SSF81767
PROSITE:PS51196 RefSeq:XP_635190.1 ProteinModelPortal:Q54EQ0
EnsemblProtists:DDB0183872 GeneID:8628135 KEGG:ddi:DDB_G0291406
InParanoid:Q54EQ0 Uniprot:Q54EQ0
Length = 4135
Score = 292 (107.8 bits), Expect = 4.3e-31, Sum P(5) = 4.3e-31
Identities = 62/178 (34%), Positives = 105/178 (58%)
Query: 322 TGRLMKTRRWAEGLHQALEAKENLEIQNETQTLASITFQNYFRMYKKISGMTGTA--ETE 379
TGRLM R+++GLH+ +E K + E+ T A+I+ ++F Y + G+TGT ++E
Sbjct: 3673 TGRLMNGSRYSDGLHEFIEVKHGFQPNPESLTAAAISHPSFFAQYNVVFGLTGTCGEDSE 3732
Query: 380 AYEFQEIYKLETITVPPNKINKRKDLQDKIYKTMEEKYQAILMDIKNCYIKEQPVLVGTT 439
E +Y +++ VP + +KR KIY T+++ +I+ +IK +P+L+
Sbjct: 3733 RSELSLVYDVDSFNVPSYQPSKRIKKPSKIYSTIQDYQNSIIDEIKEMQSLSRPILLLVP 3792
Query: 440 SIENSELLSNILKKNNLPHSVLNAKQHKLEAQIIAQAGHPKMITIATNMAGRGTDIIL 497
+I +SE + +L+ N++ +LN Q + E II +AG ++T+ATN AGRGTDI L
Sbjct: 3793 TINDSEEFTQLLQSNSIKSQLLNEMQQQDEEFIITKAGECGVVTVATNTAGRGTDIKL 3850
Score = 138 (53.6 bits), Expect = 4.3e-31, Sum P(5) = 4.3e-31
Identities = 35/97 (36%), Positives = 56/97 (57%)
Query: 95 GNISEMQTGEGK-TLVATLAAYLNSLSGQGVHIVTISDYLAKRDAEWMSVLYNWLGLSIG 153
G I+++ TGEGK T+VA LA+Y ++ G+ + I+T S+YLA+RD + + S+G
Sbjct: 3395 GRIAQVLTGEGKSTIVALLASYC-AILGRTIDIITTSEYLAQRDF----IKFEGFFKSLG 3449
Query: 154 VNSSEISHSLKKKS-YEADITYGTNNEFGFDYLRDNM 189
++ S I + + A I +GTN F F L D +
Sbjct: 3450 ISCSHICYQHPTPQVFNAQILFGTNTNFEFALLGDKL 3486
Score = 78 (32.5 bits), Expect = 4.3e-31, Sum P(5) = 4.3e-31
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 535 KVISSGGLHIIGTERHESRRIDNQLRGRSGRQGDPGSSR 573
+ + +GGLH+I + R++ Q GRSGRQG GS R
Sbjct: 3853 EALENGGLHVIFAFYPANLRVECQGLGRSGRQGQNGSCR 3891
Score = 48 (22.0 bits), Expect = 1.1e-21, Sum P(6) = 1.1e-21
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 93 HYGNISEMQTGEGKTLVATLAA-YLNSLSGQGVHIVTIS-DYLAKRDAEWMSVLYNWLGL 150
H+ + +EM++ K+L++ L LN S + ++ + ++ E++S L NWL
Sbjct: 2725 HFWSSNEMKSI--KSLISKLDFNQLNPFSNESKFTRALNLGFTNEKAKEFIS-LNNWLVE 2781
Query: 151 SIGVNSSEISHSLKKKSYEADITYGTNNEFGFDYLRDNMVFNSN 194
S + S S SL K S + N F YL +F SN
Sbjct: 2782 SPIKSKSSASASLLKNS--------SLNPFD-SYLSPESIFKSN 2816
Score = 44 (20.5 bits), Expect = 1.2e-30, Sum P(6) = 1.2e-30
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 2 SFLTKIFGSRNQRLLKKYQKIVQKINELESVMQKLSDEELQNQTSKLKQSIHS 54
S L +I S N +K+ KI+ N+ + +Q +E ++ ++ ++I S
Sbjct: 1855 SILIEIVSSNNHLAIKQLFKIITLFND--NTIQICLEESIRKDNIEIFKTILS 1905
Score = 43 (20.2 bits), Expect = 4.3e-31, Sum P(5) = 4.3e-31
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 17 KKYQKIVQKINELESVMQKLSDEELQNQTSKLK-QSIHSGETLDSILPKAFSVCREASKR 75
+ Y+ ++ K++ L S + + L N TS+ + I E D+ L F V ++
Sbjct: 698 ESYKNLINKLSNLISNLMINKIKTLTNNTSEYNFKDIELSEYCDN-LATGFLVLMKSIIG 756
Query: 76 VLKMRHFDVQLIGGIALHYGNISEMQT 102
++++ F Q + + Y I E +T
Sbjct: 757 IVEISKF--QTLFYMMAQYLYILESKT 781
Score = 41 (19.5 bits), Expect = 5.3e-21, Sum P(5) = 5.3e-21
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 267 DYIIDYETNQVFLTENGYEKYEN 289
DYI ETNQ+ + E Y YE+
Sbjct: 277 DYINSKETNQI-IKELIYGIYEH 298
Score = 40 (19.1 bits), Expect = 2.9e-30, Sum P(6) = 2.9e-30
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 4 LTKIFGSRNQRLLKKYQKIVQKINELESVM---QKLSDEELQNQTSKLKQ 50
L IF + ++ L K Y+K + N+L+S + + +E++ + + L+Q
Sbjct: 85 LIDIFVNYSKDLNKMYEKYKELQNDLKSYIGYDKNRLNEKMDDGLAHLRQ 134
Score = 38 (18.4 bits), Expect = 4.3e-31, Sum P(5) = 4.3e-31
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 791 REAFKL-FHKMLNLIKYEAIKKI 812
+E+ L + K+LNL K IK+I
Sbjct: 3896 KESLDLEYKKILNLPKINKIKEI 3918
Score = 38 (18.4 bits), Expect = 1.2e-30, Sum P(6) = 1.2e-30
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 73 SKRVLKMRHFDVQLI 87
SK L M+H D+ LI
Sbjct: 2081 SKTQLNMKHLDLLLI 2095
Score = 38 (18.4 bits), Expect = 1.2e-30, Sum P(6) = 1.2e-30
Identities = 9/36 (25%), Positives = 14/36 (38%)
Query: 751 NIILQSIDKYWIEHLLSLDQLRQGINLRSYAQKDPK 786
N I+Q I + W + +L N S P+
Sbjct: 4067 NSIIQLIQQEWAQFFTDFSELSSPSNYLSTISSTPE 4102
Score = 38 (18.4 bits), Expect = 1.4e-30, Sum P(5) = 1.4e-30
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 22 IVQKINELESVMQKLSDEELQNQTSKLKQSIHS 54
IV NELE + + E+ +S +SI S
Sbjct: 2705 IVNHFNELERIQHSSTIEQKHFWSSNEMKSIKS 2737
Score = 37 (18.1 bits), Expect = 6.7e-21, Sum P(5) = 6.7e-21
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 281 ENGYEKYENILIKMAL 296
ENGY + N+++ L
Sbjct: 1395 ENGYPEIANLILNKTL 1410
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 816 691 0.00081 121 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 613 (65 KB)
Total size of DFA: 331 KB (2167 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 60.89u 0.09s 60.98t Elapsed: 00:00:24
Total cpu time: 60.90u 0.09s 60.99t Elapsed: 00:00:26
Start: Thu Aug 15 13:53:46 2013 End: Thu Aug 15 13:54:12 2013