BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2372
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P74409|Y260_SYNY3 UPF0053 protein sll0260 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0260 PE=3 SV=1
Length = 448
Score = 297 bits (761), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 262/427 (61%), Gaps = 17/427 (3%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
L+ LNGIFS SEIAI+++++VRL++L ++G+ A AL L+ P +F S VQIGITLI I
Sbjct: 16 LVVLNGIFSGSEIAIVSARKVRLEQLAKRGNRKAKLALKLATAPNNFLSAVQIGITLIGI 75
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYS 145
GA G +++ L + L+ +A +S+ ++V IT+ SL+ GEL+PKRIA+ +
Sbjct: 76 LTGAVGGATVALRLAEFLDDIPLLAPYAGPLSISLLVGFITYLSLVVGELVPKRIALSHP 135
Query: 146 EKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKLFREGFD 205
E A ++P M + +L P V +L +ST+++L +F I K+ ITEEEI + +G
Sbjct: 136 EHIACGVAPAMHLVAQLTAPLVYLLGVSTDAVLRLFGITSKEASPITEEEIRVMIEQGAQ 195
Query: 206 IGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVY 265
G+ ++ E + R +L D+ TLMTPR + +++++ + E+N +ILD+ Y+ FPV
Sbjct: 196 AGMIDEAEQEMVERVFRLGDRPVKTLMTPRTAIAWLDVESDWEENQQEILDTPYSRFPVG 255
Query: 266 KKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSE 325
+ S+ + +G + K + S + I++ +QPPLF+ E ++ +LE F+ + +
Sbjct: 256 RDSLDECLGFVRVKDILNSQWSGQ---KINLEEIVQPPLFVAENTRSLHVLEMFRASGTH 312
Query: 326 LSLVIDEYGELEGIITINDIIHSLIGDISNS---YQEEIEFCEDGSWIISASMTFDRFKE 382
L+L+ DEYG +EG++T+ND+I +++G I N + +I EDGS+++ + D FKE
Sbjct: 313 LALITDEYGGIEGLVTLNDLIEAIVGSIPNDDEIQEPQIIQREDGSYLLDGLLPIDEFKE 372
Query: 383 L-----LSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIE 437
+ LSN+ +YHTL GFV+ LG IP+ + F+ +++EV+DM+ +I+
Sbjct: 373 IFDIETLSNEEE------GHYHTLGGFVIESLGKIPQSGDYFVSDTLRVEVVDMDGIRID 426
Query: 438 RLLVTIL 444
++LV L
Sbjct: 427 KVLVNQL 433
>sp|P0AE45|YTFL_ECOLI UPF0053 inner membrane protein YtfL OS=Escherichia coli (strain
K12) GN=ytfL PE=1 SV=1
Length = 447
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 236/429 (55%), Gaps = 18/429 (4%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
LI ++ FSMSEI++ S++++LK L ++G+I A L + ENP FF+ VQIG+ ++I
Sbjct: 11 LIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAI 70
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDH-----AHEISLVIVVFSITFFSLIFGELIPKRI 140
G G+ A+ +P F SL + + ++S ++ +T ++F +L PKRI
Sbjct: 71 LGGIVGD----AAFSPA--FHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRI 124
Query: 141 AMQYSEKAA-SIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKL 199
M E A II+P M F L + P V I IF + + D IT ++IY +
Sbjct: 125 GMIAPEAVALRIINP-MRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAV 183
Query: 200 FREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSY 259
G G+ K E+ L +L+ + + MTPR V + ++ ++ + K+ + +
Sbjct: 184 VEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPH 243
Query: 260 NYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETF 319
+ F V + I IIG +++K L ++++N+S+ ++ I+ L +P+T++ + LE+F
Sbjct: 244 SKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA-LNSGVQIRNTLIVPDTLTLSEALESF 302
Query: 320 KKNKSELSLVIDEYGELEGIITINDIIHSLIGD-ISNSYQEEIEFCEDGSWIISASMTFD 378
K + +++++EY + GIIT+ND++ +L+GD + +E+I ++ SW+I D
Sbjct: 303 KTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPID 362
Query: 379 RFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIER 438
+L FP S NY T+ GF+M L IPK +++ + K EV+D++N +I++
Sbjct: 363 DVMRVLDID-EFPQ--SGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQ 419
Query: 439 LLVTILNDK 447
LLVT ++ K
Sbjct: 420 LLVTRIDSK 428
>sp|P0AE46|YTFL_ECOL6 UPF0053 inner membrane protein YtfL OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=ytfL PE=3 SV=1
Length = 447
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 236/429 (55%), Gaps = 18/429 (4%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
LI ++ FSMSEI++ S++++LK L ++G+I A L + ENP FF+ VQIG+ ++I
Sbjct: 11 LIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAI 70
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDH-----AHEISLVIVVFSITFFSLIFGELIPKRI 140
G G+ A+ +P F SL + + ++S ++ +T ++F +L PKRI
Sbjct: 71 LGGIVGD----AAFSPA--FHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRI 124
Query: 141 AMQYSEKAA-SIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKL 199
M E A II+P M F L + P V I IF + + D IT ++IY +
Sbjct: 125 GMIAPEAVALRIINP-MRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAV 183
Query: 200 FREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSY 259
G G+ K E+ L +L+ + + MTPR V + ++ ++ + K+ + +
Sbjct: 184 VEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPH 243
Query: 260 NYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETF 319
+ F V + I IIG +++K L ++++N+S+ ++ I+ L +P+T++ + LE+F
Sbjct: 244 SKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA-LNSGVQIRNTLIVPDTLTLSEALESF 302
Query: 320 KKNKSELSLVIDEYGELEGIITINDIIHSLIGD-ISNSYQEEIEFCEDGSWIISASMTFD 378
K + +++++EY + GIIT+ND++ +L+GD + +E+I ++ SW+I D
Sbjct: 303 KTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPID 362
Query: 379 RFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIER 438
+L FP S NY T+ GF+M L IPK +++ + K EV+D++N +I++
Sbjct: 363 DVMRVLDID-EFPQ--SGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQ 419
Query: 439 LLVTILNDK 447
LLVT ++ K
Sbjct: 420 LLVTRIDSK 428
>sp|P0AE47|YTFL_ECO57 UPF0053 inner membrane protein YtfL OS=Escherichia coli O157:H7
GN=ytfL PE=3 SV=1
Length = 447
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 236/429 (55%), Gaps = 18/429 (4%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
LI ++ FSMSEI++ S++++LK L ++G+I A L + ENP FF+ VQIG+ ++I
Sbjct: 11 LIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIGLNAVAI 70
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDH-----AHEISLVIVVFSITFFSLIFGELIPKRI 140
G G+ A+ +P F SL + + ++S ++ +T ++F +L PKRI
Sbjct: 71 LGGIVGD----AAFSPA--FHSLFSRYMSAELSEQLSFILSFSLVTGMFILFADLTPKRI 124
Query: 141 AMQYSEKAA-SIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKL 199
M E A II+P M F L + P V I IF + + D IT ++IY +
Sbjct: 125 GMIAPEAVALRIINP-MRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSDDIYAV 183
Query: 200 FREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSY 259
G G+ K E+ L +L+ + + MTPR V + ++ ++ + K+ + +
Sbjct: 184 VEAGALAGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNKVAEHPH 243
Query: 260 NYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETF 319
+ F V + I IIG +++K L ++++N+S+ ++ I+ L +P+T++ + LE+F
Sbjct: 244 SKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA-LNSGVQIRNTLIVPDTLTLSEALESF 302
Query: 320 KKNKSELSLVIDEYGELEGIITINDIIHSLIGD-ISNSYQEEIEFCEDGSWIISASMTFD 378
K + +++++EY + GIIT+ND++ +L+GD + +E+I ++ SW+I D
Sbjct: 303 KTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQGLEEQIVARDENSWLIDGGTPID 362
Query: 379 RFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIER 438
+L FP S NY T+ GF+M L IPK +++ + K EV+D++N +I++
Sbjct: 363 DVMRVLDID-EFPQ--SGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNYRIDQ 419
Query: 439 LLVTILNDK 447
LLVT ++ K
Sbjct: 420 LLVTRIDSK 428
>sp|P44717|Y452_HAEIN UPF0053 protein HI_0452 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0452 PE=3 SV=1
Length = 432
Score = 182 bits (461), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 232/436 (53%), Gaps = 14/436 (3%)
Query: 15 HMVLSLSPGIRLIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFS 74
H +L++ + LI + + S +EI++ + ++++L+ L KG + L L L E+P F +
Sbjct: 7 HTILAI---VALILSSAVVSSAEISLASPRKLKLQSLANKGDVRPLQVLKLQEHPGRFIT 63
Query: 75 TVQIGITLISIFNGAFGESSL---VASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLI 131
VQI + +++I G GES+L +A + + S + A I+ ++V T ++
Sbjct: 64 VVQILLNMVAILGGGIGESALSPYIADILNRSFEGSWIAPTASTIAFILV----TCLFIL 119
Query: 132 FGELIPKRIAMQYSEKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLI 191
F +LIPKRIA+ Y E A + +M F + + P V +F I + D +
Sbjct: 120 FADLIPKRIAITYPEMVALSVVGIMNFSMYVFKPLVWFFDTIANVFFRLFRISTVREDGM 179
Query: 192 TEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNL 251
T E+I+ + G + G+ E+ L + + + MT R + +++ + ++ +
Sbjct: 180 TSEDIFAVVEAGAEAGVLKTQEHYLIENIFDMQARTVTSTMTTRENIVYLDRTFSRQEVM 239
Query: 252 IKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETIS 311
+ S++ + + KI+G + + TL + N ++V D ++ LF+P+T+S
Sbjct: 240 DTLSRDSHSKIVICDNGLDKILGYIESHTLLTMYLQNENVVLTD-PKLLRKALFVPDTLS 298
Query: 312 TMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSWII 371
++LE FK + +++++EY + GI+T+ND++ ++G++ ++ +E I ++ SW+I
Sbjct: 299 LYEVLELFKSTGEDFAIIVNEYALVVGIVTLNDVMSIVMGELVSNEEEYIVSRDENSWLI 358
Query: 372 SASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDM 431
+ + +L + FP + NY T++GF+M L IPK +++ ++ K EVID
Sbjct: 359 DGATPLEEVTRVL-DIAYFPDE--ENYETISGFMMYMLRKIPKKTDSVVYGKYKFEVIDT 415
Query: 432 NNNKIERLLVTILNDK 447
N KI+++LV+++ ++
Sbjct: 416 ENFKIDQILVSLVKEQ 431
>sp|O05241|YUGS_BACSU UPF0053 protein YugS OS=Bacillus subtilis (strain 168) GN=yugS PE=3
SV=2
Length = 429
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 203/398 (51%), Gaps = 14/398 (3%)
Query: 16 MVLSLSPGIRLIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFST 75
++L L LI + +F +E AI+ + ++ +LIE G AL+A + N + S
Sbjct: 2 LILQLIAIFVLIGITAVFVAAEFAIVKIRGSKINQLIESGDSRALAAHKIISNLDEYLSA 61
Query: 76 VQIGITLISIFNGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGEL 135
Q+GIT+ ++ G GE + L P + H ++ V+ +TF ++ GEL
Sbjct: 62 CQLGITITALGLGWLGEPTFERFLHPLFTMTGIPEPFNHIVTFVVAFIIVTFLHVVMGEL 121
Query: 136 IPKRIAMQYSEKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKND--LITE 193
PK +++Q +E + I+ +++ K+ PF+K L S ++ +F K +I+E
Sbjct: 122 APKTVSIQKAEAVSLWIAKPLIWFYKITYPFIKALNGSASFLVKLFGFHSVKEHQVVISE 181
Query: 194 EEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK 253
EE+ + E ++ G N+ E+ ++ + D++ A +M PR ++ I+++ ++E+ +
Sbjct: 182 EELRLILSESYEKGEINQSEFRYVNKIFEFDNRVAREIMIPRTEIAVISLEQSLEEAIHH 241
Query: 254 ILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTM 313
I++ Y +PV K I+G +N+K +FK + I + ++P + + E+I
Sbjct: 242 IINERYTRYPVIKDDKDHILGIINSKDMFKAYFLGQP---IKLNQIMRPVIRVIESIPVQ 298
Query: 314 QLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSY-QEEIEFC---EDGSW 369
QLL +K + +++++DEYG G++T+ DII ++G+I + Y Q+E + +
Sbjct: 299 QLLIRMQKERIHMAILVDEYGGTAGLVTVEDIIEEIVGEIRDEYDQDETPHILKKGEHHY 358
Query: 370 IISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMT 407
++ D +LL + + T+AG+++T
Sbjct: 359 VMDGKALIDEVNDLLDIAIE-----NEEIDTIAGWLLT 391
>sp|O07589|YHDT_BACSU UPF0053 protein YhdT OS=Bacillus subtilis (strain 168) GN=yhdT PE=3
SV=1
Length = 461
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 193/390 (49%), Gaps = 16/390 (4%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
LI L F SE AI+ +R R+ +LI +G+ A+ A + + + S Q+GITL SI
Sbjct: 13 LIALTAFFVASEFAIVRVRRSRIDQLITEGNKRAILARRVITDLDEYLSASQLGITLTSI 72
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYS 145
G GE + L P L +H +S + ITF ++ GEL PK +A+Q +
Sbjct: 73 GLGVLGEPAFERLLHPLFEPLGLPDSVSHAVSFAVAYGLITFLHVVVGELAPKTVAIQKA 132
Query: 146 EKAASIIS-PLMLFLLKLMGPFVKILTISTESILDIFNIK--YKKNDLITEEEIYKLFRE 202
E+ +I+ PL LF L L+ PF+ IL S + +F +K + + +EEE+ L E
Sbjct: 133 EQLTLLIAGPLRLFYL-LLFPFIWILNGSARLLCGMFGLKPASEHDGSHSEEELRMLLSE 191
Query: 203 GFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYF 262
G N EY ++ + D++ A +M PR ++ ++ + + + L +L Y +
Sbjct: 192 SLKNGEINPSEYKYVNKIFEFDNRIAKEIMIPRKEMAAVSTEMTMAEMLEVMLKEKYTRW 251
Query: 263 PVYKKSISKIIGTLNTKTLFKKII--SNRSIVNIDITSAIQPPLFIPETISTMQLLETFK 320
PV ++G +NTK LF ++ + + + I ++P + + ETI LL +
Sbjct: 252 PVTDGDKDSVLGLVNTKHLFSDLLFMTEEERMKMTIHPYVRPVIEVIETIPVHDLLIKMQ 311
Query: 321 KNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEE----IEFCEDGSWIISASMT 376
+ + ++++ DEYG G++T DI+ ++G+I + + E+ I+ DG +++ +
Sbjct: 312 RERIHMAILSDEYGGTSGLVTTEDILEEIVGEIRDEFDEDEQPLIQKLGDGHYVMDGKVR 371
Query: 377 FDRFKELLSNQVNFPVKISRNYHTLAGFVM 406
D+ LL I + T+ G ++
Sbjct: 372 IDQVNSLLG------ASIQEDVDTIGGLIL 395
>sp|O07585|YHDP_BACSU UPF0053 protein YhdP OS=Bacillus subtilis (strain 168) GN=yhdP PE=3
SV=1
Length = 444
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 192/388 (49%), Gaps = 11/388 (2%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
LI L F SE AII + R+ +LI +G+ A++ ++ + + S Q+GITL SI
Sbjct: 12 LIALTAFFVASEFAIIRIRGSRIDQLIAEGNKAAIAVKKVTTHLDEYLSACQLGITLTSI 71
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYS 145
G GES++ L P ++ +H IS + ITF ++ GEL PK +A+Q +
Sbjct: 72 GLGVLGESTIERLLHPLFVQMNVPGSLSHVISFIFAYAIITFLHVVVGELAPKTVAIQKA 131
Query: 146 EKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIK-YKKNDLI-TEEEIYKLFREG 203
E + + + +++ ++ PF+ +L S + F ++ +N+L +EEE+ + E
Sbjct: 132 EAVSMLFAKPLIWFYRIAFPFIWLLNNSARLLTKAFGLETVSENELAHSEEELRIILSES 191
Query: 204 FDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFP 263
+ G N+ E+ ++ + DD+ A +M PR ++ + D I + + I Y +P
Sbjct: 192 YKSGEINQSEFKYVNKIFEFDDRLAKEIMIPRTEIVSLPHDIKISEMMDIIQIEKYTRYP 251
Query: 264 VYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNK 323
V + IIG +N K + IS V+ I+ + P + + E+ LL +K +
Sbjct: 252 VEEGDKDNIIGVINIKEVLTACISGEVSVDSTISQFVNPIIHVIESAPIQDLLVKMQKER 311
Query: 324 SELSLVIDEYGELEGIITINDIIHSLIGDISNSYQ----EEIEFCEDGSWIISASMTFDR 379
++++ DEYG G++T+ DII ++G+I + + EI +G +I+ + D+
Sbjct: 312 VHMAILSDEYGGTAGLVTVEDIIEEIVGEIRDEFDIDEISEIRKIGEGHYILDGKVLIDQ 371
Query: 380 FKELLSNQVNFPVKISRNYHTLAGFVMT 407
+LL + + T+ G+ +T
Sbjct: 372 VNDLLGIHLE-----NEEVDTIGGWFLT 394
>sp|P54428|YRKA_BACSU UPF0053 protein YrkA OS=Bacillus subtilis (strain 168) GN=yrkA PE=3
SV=2
Length = 434
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 196/391 (50%), Gaps = 15/391 (3%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
LI L F +E AI+ + ++ +LI +G GA+SA + + + S Q+GIT+ ++
Sbjct: 12 LIVLTAFFVATEFAIVKIRSSKIDQLILEGKKGAISAKKVITHLDEYLSACQLGITVTAL 71
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYS 145
G GES+ L P F + +H + LVI TF ++ GEL PK +A+Q +
Sbjct: 72 GIGWVGESTFEVILHPLFAHFHVSETVSHVLILVIAFVMATFLHVVVGELAPKTLAIQKA 131
Query: 146 EKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIK-YKKNDLI-TEEEIYKLFREG 203
E + + +++ +++ PF+ L S I+ +F +K +++L +EEE+ L E
Sbjct: 132 ETITLLTAKPIIWFYRILFPFIWFLNGSARFIVGLFGLKPASEHELAHSEEELRILLSES 191
Query: 204 FDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDS-SYNYF 262
+ G N+ E + + D++ A +M PR ++ I+ +D+ E ++KI+ + SY +
Sbjct: 192 YKSGEINQNELKYVNNIFEFDERIAKEIMIPRREIVAISSEDSYE-TIVKIIKTESYTRY 250
Query: 263 PVYKKSISKIIGTLNTKTLFKKIISNRSIVNID--ITSAIQPPLFIPETISTMQLLETFK 320
PV IIG +N K I + D + + I P + + E++ +L +
Sbjct: 251 PVLNGDKDSIIGFINAKEFLSAYIDTDQKIKEDFKLENHINPVIHVIESVPIHDVLVKMQ 310
Query: 321 KNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEE----IEFCEDGSWIISASMT 376
K ++ +++++DEYG G++T DI+ ++G+I + + ++ I D +I+ + +
Sbjct: 311 KERTHIAILVDEYGGTSGLVTAEDILEEIVGEIRDEFDKDEVPNIRKVNDNHYILDSKVL 370
Query: 377 FDRFKELLSNQVNFPVKISRNYHTLAGFVMT 407
+ +LL + S T+ G+ MT
Sbjct: 371 IEDVNDLLGTTLA-----SDEVDTIGGWFMT 396
>sp|P54505|YQHB_BACSU UPF0053 protein YqhB OS=Bacillus subtilis (strain 168) GN=yqhB PE=3
SV=1
Length = 442
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/335 (28%), Positives = 175/335 (52%), Gaps = 4/335 (1%)
Query: 30 NGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISIFNGA 89
G F E +I+ +R ++ +L+ KG GA +A + + + S Q+GIT+ ++ G
Sbjct: 25 TGFFVAVEFSIVKVRRSKIDQLVAKGKKGAKAAKHVITHLDEYLSACQLGITVAALGLGW 84
Query: 90 FGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYSEKAA 149
GE ++ L P L H +SLVI +T+ +++ GEL PK A+Q +E
Sbjct: 85 LGEPTVQTLLRPLFHKAGLNESLTHLLSLVIAFLVVTYLNVVIGELAPKSFAIQKAESIT 144
Query: 150 SIISPLMLFLLKLMGPFVKILTISTESILDIFNIK-YKKNDLI-TEEEIYKLFREGFDIG 207
+ + +++ K+M PF+ +L S I +F +K +++L TEEE+ L E + G
Sbjct: 145 LLFAKPLIWFYKIMFPFIWLLNHSARLITGVFGLKPASEHELAYTEEELRVLLAESYKSG 204
Query: 208 IFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK-ILDSSYNYFPVYK 266
K E + D + A +M PR ++ +++D++ NL + + + Y +PV +
Sbjct: 205 EIRKSELKYMNNIFTFDKRMAKEIMVPRNEMVSLSLDEDSISNLQETVKQTKYTRYPVVR 264
Query: 267 KSISKIIGTLNTK-TLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSE 325
+ +IG +N K LF + + SI I +QP + + ETI +LL +K ++
Sbjct: 265 EDKDNVIGVINMKEVLFSMLTKDFSIKKHQIEPFVQPVIHVIETIPIYKLLLKMQKERTH 324
Query: 326 LSLVIDEYGELEGIITINDIIHSLIGDISNSYQEE 360
++++IDEYG G++T+ DII ++G+I + + +
Sbjct: 325 MAILIDEYGGTSGLVTVEDIIEEIVGEIRDEFDAD 359
>sp|Q57017|Y107_HAEIN UPF0053 protein HI_0107 OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=HI_0107 PE=1 SV=2
Length = 420
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 198/418 (47%), Gaps = 26/418 (6%)
Query: 27 IFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISIF 86
+ L+ FS SE +++ + RL+ L E+G+ GA A L E P S I IF
Sbjct: 17 LVLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLS-------FILIF 69
Query: 87 NGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYSE 146
N S+ + +R + + + I +TF L+F E+ PK +A ++E
Sbjct: 70 NNLVNISASAIATVIGMRLYG-------DAGVAIATGLLTFVMLVFSEIFPKTVAAMHAE 122
Query: 147 KAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYK-KNDLITEEEIYKLFREGFD 205
K + S ++ LLK+ P V ++ I T+S++ I +K + +I+ EE+ + E +
Sbjct: 123 KVSFFSSHILTSLLKIFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIVSEAGE 182
Query: 206 IGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVY 265
N+ + L ++ +M PR ++ INIDD+ + ++ +++N +Y
Sbjct: 183 -ATPNEQHPQMLLSILDMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVLY 241
Query: 266 KKSIS-KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKS 324
K S+ +++G L + F+ ++ + A FIPE+ L F+ NK
Sbjct: 242 KGSLDEQVLGILRVREAFRLLLEKNEFTKETLIRAADEVYFIPESTPLKTQLANFRTNKE 301
Query: 325 ELSLVIDEYGELEGIITINDIIHSLIGDISNSY----QEEIEFCEDGSWIISASMTFDRF 380
+ LV+DEYG+++G++T+ DI+ ++GD + S +E+ DGS II S
Sbjct: 302 RIGLVVDEYGDIKGLVTLEDILEEIVGDFTTSTAPSIDKEVIQQSDGSMIIDGSANLRDL 361
Query: 381 KELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIER 438
++ + +++ + + T G ++ L IP + I ++++ +N I++
Sbjct: 362 NKMFNWELD-----TEDARTFNGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQ 414
>sp|Q84R21|Y1559_ARATH DUF21 domain-containing protein At1g55930, chloroplastic
OS=Arabidopsis thaliana GN=CBSDUFCH2 PE=2 SV=2
Length = 653
Score = 123 bits (308), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 198/407 (48%), Gaps = 37/407 (9%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISI 85
L+ L+ FSM+E +I T ++++L EK + ++ S + F +T+ IG T+++I
Sbjct: 163 LLGLSAFFSMAETSITTLWPWKVRELAEKEPENGVFRMLRS-DVTRFLTTILIGTTVVNI 221
Query: 86 FNGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYS 145
++LV I F E + +T L+ E+ PK +A+ +
Sbjct: 222 -----AATALVTKAATAI--FG-------EAGVSAATGVMTVAILLLTEITPKSVAVHNA 267
Query: 146 EKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKLFREGFD 205
++ A I+ + +L ++ P +++T + IL I +K + +TE+E+ + R
Sbjct: 268 QEVARIVVRPVAWLSLILYPVGRVVTYLSMGILKILGLKGRSEPYVTEDELKLMLRGAEL 327
Query: 206 IGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVY 265
G + E ++ L++ D +MTP + V I+ ++ + Y+ PV+
Sbjct: 328 SGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDGSGSLVDFHNFWVTHQYSRVPVF 387
Query: 266 KKSISKIIGTLNTKTLFK-----KIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFK 320
++ I I+G L K++ + ++V++ A +P F+P+++S LL F+
Sbjct: 388 EQRIDNIVGIAYAMDLLDYVPKGKLLESTTVVDM----AHKPAFFVPDSMSVWNLLREFR 443
Query: 321 KNKSELSLVIDEYGELEGIITINDIIHSLIGDI--SNSYQEEIE-------FCEDGSWII 371
K +++V++EYG GI+T+ D++ ++G+I N +EEI+ +G + +
Sbjct: 444 IRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGIYDV 503
Query: 372 SASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISEN 418
A+ + D+ LS ++N + Y T++GFV G+IPK E+
Sbjct: 504 DANTSIDQ----LSEELNIKMAEGHQYETVSGFVCEAFGYIPKTGES 546
>sp|P37908|YFJD_ECOLI UPF0053 inner membrane protein YfjD OS=Escherichia coli (strain
K12) GN=yfjD PE=1 SV=5
Length = 428
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 192/415 (46%), Gaps = 27/415 (6%)
Query: 33 FSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISIFNGAFGE 92
FS SE ++T R RL+ + ++G+ A L P S V IG L++I A G
Sbjct: 23 FSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALG- 81
Query: 93 SSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYSEKAASII 152
++V +R + + + I +TF L+F E++PK IA Y EK A
Sbjct: 82 -TIVG-----MRLYG-------DAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPS 128
Query: 153 SPLMLFLLKLMGPFVKILTISTESILDIFNIKYK--KNDLITEEEIYKLFREGFDIGIFN 210
S L+ L LM P V +L T ++ + IK + +++EE+ + E +
Sbjct: 129 SFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESR--SQIS 186
Query: 211 KIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSIS 270
+ ++ L L+ +M PR ++ I+I+D+ + L ++ S + +Y+ S+
Sbjct: 187 RRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLD 246
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
I L + ++ + + + A F+PE L F++NK ++ LV+
Sbjct: 247 DAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVV 306
Query: 331 DEYGELEGIITINDIIHSLIGD----ISNSYQEEIEFCEDGSWIISASMTFDRFKELLSN 386
+EYG+++G++T+ DI+ ++GD +S + EE+ DGS II + + +
Sbjct: 307 NEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFN- 365
Query: 387 QVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERLLV 441
+ P +R T+ G ++ L IP I+++D+ +N I+++ V
Sbjct: 366 -WHLPEDDAR---TVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVKV 416
>sp|Q50592|Y1842_MYCTU UPF0053 protein Rv1842c/MT1890 OS=Mycobacterium tuberculosis
GN=Rv1842c PE=3 SV=1
Length = 455
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 178/387 (45%), Gaps = 34/387 (8%)
Query: 73 FSTVQIGITLISIFNGAFGESSLVASLTPKIRFFSL-MRDHAHE-----ISLVIVVFSIT 126
S Q+GI++ ++ G E LVA L P ++ M D + +LVIV T
Sbjct: 63 LSGAQLGISITTLATGYLTEP-LVAEL-PHPGLVAVGMSDRVADGLITFFALVIV----T 116
Query: 127 FFSLIFGELIPKRIAMQYSEKAA-SIISPLMLFLLKLMGPFVKILTISTESILDIFNIKY 185
S++FGEL+PK +A+ + A S+++ +LF L L+ P +++ + I+ I+
Sbjct: 117 SLSMVFGELVPKYLAVARPLRTARSVVAGQVLFSL-LLTPAIRLTNGAANWIVRRLGIEP 175
Query: 186 KK--NDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINI 243
+ T +E+ L R G + L R+L+ A LMTPR K+ +
Sbjct: 176 AEELRSARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQT 235
Query: 244 DDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPP 303
DD I + S ++ FPV + + +G ++ K +F+ +R+ + +T+ +P
Sbjct: 236 DDTIADLVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRA--HTLLTTVAEPV 293
Query: 304 LFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIE- 362
+P T+ ++ + + + ++V+DEYG G++T+ D+I ++GD+ + + +
Sbjct: 294 AVVPSTLDGDAVMAQVRASALQTAMVVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPD 353
Query: 363 -FCEDGSWIISASMTFDRFKELLSNQV-NFPVKISRNYHTLAGFVMTFLGHIPKISENFI 420
W +S + D + + P Y T+ G V+ LGHIP E
Sbjct: 354 VVAAGNGWRVSGLLRIDEVASATGYRAPDGP------YETIGGLVLRELGHIPVAGE--- 404
Query: 421 WKNIKIEVIDMNN--NKIERLLVTILN 445
+++ +D + + R L T++
Sbjct: 405 --TVELTALDQDGLPDDSMRWLATVIQ 429
>sp|Q9LK65|Y3307_ARATH Putative DUF21 domain-containing protein At3g13070, chloroplastic
OS=Arabidopsis thaliana GN=CBSDUFCH1 PE=4 SV=1
Length = 661
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 189/403 (46%), Gaps = 47/403 (11%)
Query: 35 MSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISIFNGA----- 89
M+E +I T ++++L EK + ++ S + F +T+ IG T+++I A
Sbjct: 177 MAETSITTLWPWKVRELAEKEPENGVFRMLRS-DVTRFLTTILIGTTVVNIAATALVTEA 235
Query: 90 ----FGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYS 145
FGE+ + A+ LM T L+ E+ PK +A+ +
Sbjct: 236 ATAIFGEAGVSAAT-------GLM----------------TVAILLLTEITPKSVAVHNA 272
Query: 146 EKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKLFREGFD 205
++ A I+ + +L ++ P +I+T + IL I +K + +TE+E+ + R
Sbjct: 273 QEVARIVVRPVAWLSLVLYPVGRIVTYLSMGILKILGLKGRSEPYVTEDELKLMLRGAEL 332
Query: 206 IGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVY 265
G + E ++ L++ D +MTP + V I+ ++ + Y+ PV+
Sbjct: 333 SGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASASLVDFHSMWVTHQYSRVPVF 392
Query: 266 KKSISKIIGTLNTKTLFKKIISNRSIVNIDITS-AIQPPLFIPETISTMQLLETFKKNKS 324
++ I I+G L + + + + A +P F+P+++S LL F+ K
Sbjct: 393 EQRIDNIVGIAYAMDLLDYVQKGDLLESTSVGDMAHKPAYFVPDSMSVWNLLREFRIRKV 452
Query: 325 ELSLVIDEYGELEGIITINDIIHSLIGDI--SNSYQEEIE-------FCEDGSWIISASM 375
+++V++EYG GI+T+ D++ ++G+I N +EEI+ ++G + + A+
Sbjct: 453 HMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRDEGIYDVDANT 512
Query: 376 TFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISEN 418
+ D+ LS ++N + Y T++GFV G+IPK E+
Sbjct: 513 SIDQ----LSEELNMKMPEGIQYETVSGFVCEAFGYIPKTGES 551
>sp|Q50593|Y1841_MYCTU Uncharacterized protein Rv1841c/MT1889 OS=Mycobacterium
tuberculosis GN=Rv1841c PE=3 SV=1
Length = 345
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 164/340 (48%), Gaps = 21/340 (6%)
Query: 27 IFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISIF 86
I N F +E A+I+++R RL+ L E+G A++ + E + Q+G+T+ SI
Sbjct: 14 IGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLGVTVSSIL 73
Query: 87 NGAFGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYSE 146
G GE ++V L + H +SL IVV ++ GE++PK IA+ E
Sbjct: 74 LGRVGEPAVVKLLQLSFGLSGVPPALLHTLSLAIVV----ALHVLLGEMVPKNIALAGPE 129
Query: 147 KAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKN-DL-ITEEEIYKLFREGF 204
+ A ++ P L ++L PF+ +IL + ++ K D+ ++ E+ ++ E
Sbjct: 130 RTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAELSEMIAESL 189
Query: 205 DIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINID--------DNIEKNLIKILD 256
G+ + E+ +RAL++ + + P + + + + +E+ L +
Sbjct: 190 SEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGVEQALAQ--- 246
Query: 257 SSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLL 316
+ Y+ FPV + + IG L+ K + + ++++++ + ++P +P+++ L
Sbjct: 247 TGYSRFPVVDRG-GRFIGYLHIKDVLTLGDNPQTVIDLAV---VRPLPRVPQSLPLADAL 302
Query: 317 ETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNS 356
++ S L+LV + G + G++ + D++ L+G + +
Sbjct: 303 SRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRDG 342
>sp|Q48445|YC19_KLEPN UPF0053 protein in cps region (Fragment) OS=Klebsiella pneumoniae
PE=3 SV=1
Length = 320
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 173 STESILDIFNIKYKKNDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLM 232
+TE+++++ + + +K +L + + L + +FN E + R L L+ + ++M
Sbjct: 64 TTEAVMNLLSGQKEKAEL--DADTASLVADQDQHPLFNPQERLMIERVLNLNQRSVSSIM 121
Query: 233 TPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYK-KSISKIIGTLNTKTLFKKIISNRSI 291
T R + IN+ E+ + + + V K ++G ++ L ++ + +
Sbjct: 122 TSRHDIERINLSAPEEEIRSLVEKNQHTRLVVTGGKDNEDLLGVVHVIDLLQQSLRQEPL 181
Query: 292 VNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351
D+ + ++ PL PE + + LE F++ ++ + V+DE+G +EGI+T++D++ ++ G
Sbjct: 182 ---DLQALVRQPLVFPEGLPLLSALEQFRQARTHFAFVVDEFGSVEGIVTLSDVMETIAG 238
Query: 352 DISNSYQE-----EIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVM 406
++ N +E +I+ +DGSW ++ M E L V P+ R YHT+AG +M
Sbjct: 239 NLPNEVEEIDARHDIQHHQDGSWTVNGHMPL----EDLVQYVPLPLDDKREYHTVAGLLM 294
Query: 407 TFLGHIPK 414
+L H+P+
Sbjct: 295 EYLQHVPQ 302
>sp|P76389|YEGH_ECOLI UPF0053 protein YegH OS=Escherichia coli (strain K12) GN=yegH PE=3
SV=2
Length = 527
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Query: 173 STESILDIFNIKYKKNDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLM 232
+TE+++ + + +K D + E + + + IFN E + R L L+ + ++M
Sbjct: 249 TTEAVMRL--LSGQKEDAELDAETASMLVDHGNQQIFNPQERRMIERVLNLNQRTVSSIM 306
Query: 233 TPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKS--ISKIIGTLNTKTLFKKIISNRS 290
T R + I+++ E+ + ++L+ + + V ++G ++ L ++ +
Sbjct: 307 TSRHDIEHIDLNAP-EEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEP 365
Query: 291 IVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLI 350
+ ++ I+ PL PET+ + LE F+ ++ + V+DE+G +EGI+T++D+ ++
Sbjct: 366 L---NLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIA 422
Query: 351 GDISNSYQE-----EIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFV 405
G++ N +E +I+ DGSW + M E L V P+ R YHT+AG +
Sbjct: 423 GNLPNEVEEIDARHDIQKNADGSWTANGHMPL----EDLVQYVPLPLDEKREYHTIAGLL 478
Query: 406 MTFLGHIPKISE-----NFIWKNIKIE 427
M +L IPK E +++ K +++E
Sbjct: 479 MEYLQRIPKPGEEVQVGDYLLKTLQVE 505
>sp|Q83KI8|YEGH_SHIFL UPF0053 protein YegH OS=Shigella flexneri GN=yegH PE=3 SV=2
Length = 527
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Query: 173 STESILDIFNIKYKKNDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLM 232
+TE+++ + + +K D + + + + + IFN E + R L L+ + ++M
Sbjct: 249 TTEAVMRLLS--GQKEDAELDAKTASMLVDHGNQQIFNPQERRMIERVLNLNQRTVSSIM 306
Query: 233 TPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKS--ISKIIGTLNTKTLFKKIISNRS 290
T R + I+++ E+ + ++L+ + + V ++G ++ L ++ +
Sbjct: 307 TSRHDIEHIDLNAP-EEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEP 365
Query: 291 IVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLI 350
+ ++ I+ PL PET+ + LE F+ ++ + V+DE+G +EGI+T++D+ ++
Sbjct: 366 L---NLRVLIRQPLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIA 422
Query: 351 GDISNSYQE-----EIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFV 405
G++ N +E +I+ DGSW + M E L V P+ R YHT+AG +
Sbjct: 423 GNLPNEVEEIDARHDIQKNADGSWTANGHMPL----EDLVQYVPLPLDEKREYHTIAGLL 478
Query: 406 MTFLGHIPKISE-----NFIWKNIKIE 427
M +L IPK E +++ K +++E
Sbjct: 479 MEYLQRIPKPGEEVQVGDYLLKTLQVE 505
>sp|P74078|Y1254_SYNY3 UPF0053 protein sll1254 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll1254 PE=3 SV=1
Length = 346
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 159/336 (47%), Gaps = 21/336 (6%)
Query: 30 NGIFSMSEIAIITSKRVRLKKLIEKGSIGALSALILSENPIHFFSTVQIGITLISIFNGA 89
+GI S +E A+ + V++++L + + A++ + T+ + L +IFN
Sbjct: 15 SGICSCAEAALFSVPLVKVRQLSQSNNPSAIALQAIRHRMNRPIGTI---VVLNNIFN-- 69
Query: 90 FGESSLVASLTPKIRFFSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQYSEKAA 149
+V S+T +L H + + + +T ++FGE+IPK + +Y+ A
Sbjct: 70 -----IVGSIT----IGALATKHLQDAWMGVFSGILTLLIIVFGEIIPKTLGERYATNIA 120
Query: 150 SIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKLFREGFDIGIF 209
+I+ + FL + P V ++ E I + F K+ E EI L G+ G+
Sbjct: 121 LLIAIPVRFLTLIFTPLVWLI----EQITNPFT-HGKRVPSTNEAEIKFLATLGYKEGVI 175
Query: 210 NKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSI 269
E + R +L+D A+ LMTPR+ + ++ + + + I+ S + + + I
Sbjct: 176 EGDEEQMIQRVFQLNDLMAVDLMTPRVIITYLLGELTLAECQQDIIQSQHTRILIVDEYI 235
Query: 270 SKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLV 329
+++G + L +I I +P F+PE + +LL+ F++ + L +V
Sbjct: 236 DEVLGIALKQDLLTALIQGEGYKTI--AELARPAQFVPEGMRADKLLKQFQEKREHLMVV 293
Query: 330 IDEYGELEGIITINDIIHSLIGDISNSYQEEIEFCE 365
IDEYG + G+IT+ D++ L G+I + + I+ E
Sbjct: 294 IDEYGGVAGVITLEDVVEVLTGEIVDETDKNIDLQE 329
>sp|Q54318|HLYC_TREHY Hemolysin C OS=Treponema hyodysenteriae GN=tlyC PE=3 SV=1
Length = 268
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 133/265 (50%), Gaps = 29/265 (10%)
Query: 186 KKNDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDD 245
KK D TE+ Y ++ + E + + ++L + +M PR+ V I ++
Sbjct: 12 KKKDSDTEKNNY------INLSALTEAEREIITNTIELKSKSVREIMVPRVDVVMIPMES 65
Query: 246 NIEKNLIKILDSSYN-YFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPL 304
+ +K +IK + N PVYK I I+G L K L N S+ I + PL
Sbjct: 66 SYDK-VIKAFNRDRNSRIPVYKDGIDDIVGVLYVKDLIDAEEKNFSLKKI-----LHKPL 119
Query: 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDIS---NSYQEEI 361
F+P +IS M+LL+ F++ + +++V+DEYG GI+++ D++ +IGDI + EEI
Sbjct: 120 FVPISISLMELLKNFREKQIHIAMVVDEYGGFSGIVSMEDVLEQIIGDIRDEYDEEDEEI 179
Query: 362 EFCEDGSWIISASMTFDRFK--ELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF 419
+ +DG++++ A D F E+L P T+ GF+ ++LG +PK +E+
Sbjct: 180 KSNDDGTYLVDARTRIDDFNKYEIL------PPIPDDEADTVGGFLFSYLGRLPKRNEDI 233
Query: 420 IWKNIKIEVIDMNNN-----KIERL 439
+ V+ + N +IE+L
Sbjct: 234 EYNGYSFTVVGKSGNIVTKIRIEKL 258
>sp|Q89AI6|Y300_BUCBP UPF0053 protein bbp_300 OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=bbp_300 PE=3 SV=1
Length = 519
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 119/227 (52%), Gaps = 12/227 (5%)
Query: 216 LASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGT 275
LA+R+++ ++MTPR +++++NI K ++LD+ ++ FPV K + ++IG
Sbjct: 302 LAARSIR-------SIMTPRNEISWVNIYQPKNKIRSQLLDTPHSLFPVCKGQLDEVIGI 354
Query: 276 LNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGE 335
+ K L + R+I ID +S P + IP+T+ + LL ++ K L +V +E+G
Sbjct: 355 VRAKELLVAL--ERTINIIDFSSTTLP-IIIPDTLDPINLLGVLRRAKGSLVIVTNEFGA 411
Query: 336 LEGIITINDIIHSLIGDISNSYQEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKIS 395
++G+IT D++ ++ G+ ++ + E SW++ ++ L N N +K
Sbjct: 412 VQGLITPLDVLEAIAGEFPDADETPDIIFEKDSWLVKGGTDLHSLQQCL-NITNL-IKQE 469
Query: 396 RNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERLLVT 442
+Y +LAG ++ G +P E + ++ +++ +I + +T
Sbjct: 470 NSYASLAGLLIAQKGQLPLPGETIVIPPLRFYILEATQYRINLVRIT 516
>sp|P67131|Y2387_MYCBO UPF0053 protein Mb2387c OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=Mb2387c PE=3 SV=1
Length = 435
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 191/428 (44%), Gaps = 32/428 (7%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALS-ALILSENPIHFFSTVQIGITLIS 84
LI L G+F+ + AI T R+ +L+ GA S ++++ P + + L+
Sbjct: 13 LIGLGGLFAAIDAAISTVSPARVDELVRDQRPGAGSLRKVMADRPRY--------VNLVV 64
Query: 85 IFNGAFGESSLVASLTPKIRF-FSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQ 143
+ + E + A L IR+ FS++ L + + S + + P+ + Q
Sbjct: 65 LLRTSC-EITATALLVVFIRYHFSMV------WGLYLAAGIMVLASFVVVGVGPRTLGRQ 117
Query: 144 --YSEKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKLFR 201
YS A+ + PL L LM P ++L + ++ ++ +E E+ ++
Sbjct: 118 NAYSISLATAL-PLRLISWLLM-PISRLLVLLGNALTP--GRGFRNGPFASEIELREVVD 173
Query: 202 EGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNY 261
G+ E + +L D A +M PR ++ +I D + + + S ++
Sbjct: 174 LAQQRGVVAADERRMIESVFELGDTPAREVMVPRTEMIWIESDKTAGQAMTLAVRSGHSR 233
Query: 262 FPVYKKSISKIIGTLNTKTLFKKI-ISNRSIVNIDITSAIQPPLFIPETISTMQLLETFK 320
PV +++ I+G + K L ++ S + ++P +F+P++ LL +
Sbjct: 234 IPVIGENVDDIVGVVYLKDLVEQTFCSTNGGRETTVARVMRPAVFVPDSKPLDALLREMQ 293
Query: 321 KNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEE----IEFCEDGSWIISASMT 376
++++ ++L++DEYG + G+++I D++ ++G+I++ Y + +E D + +SA +
Sbjct: 294 RDRNHMALLVDEYGAIAGLVSIEDVLEEIVGEIADEYDQAETAPVEDLGDKRFRVSARLP 353
Query: 377 FDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKI 436
+ EL + + + + T+ G + LG +P I +++ +++
Sbjct: 354 IEDVGELYGVEFDDDLDVD----TVGGLLALELGRVPLPGAEVISHGLRLHAEGGTDHRG 409
Query: 437 ERLLVTIL 444
+ T+L
Sbjct: 410 RVRIGTVL 417
>sp|P67130|Y2366_MYCTU UPF0053 protein Rv2366c/MT2435 OS=Mycobacterium tuberculosis
GN=Rv2366c PE=3 SV=1
Length = 435
Score = 89.4 bits (220), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 191/428 (44%), Gaps = 32/428 (7%)
Query: 26 LIFLNGIFSMSEIAIITSKRVRLKKLIEKGSIGALS-ALILSENPIHFFSTVQIGITLIS 84
LI L G+F+ + AI T R+ +L+ GA S ++++ P + + L+
Sbjct: 13 LIGLGGLFAAIDAAISTVSPARVDELVRDQRPGAGSLRKVMADRPRY--------VNLVV 64
Query: 85 IFNGAFGESSLVASLTPKIRF-FSLMRDHAHEISLVIVVFSITFFSLIFGELIPKRIAMQ 143
+ + E + A L IR+ FS++ L + + S + + P+ + Q
Sbjct: 65 LLRTSC-EITATALLVVFIRYHFSMV------WGLYLAAGIMVLASFVVVGVGPRTLGRQ 117
Query: 144 --YSEKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKLFR 201
YS A+ + PL L LM P ++L + ++ ++ +E E+ ++
Sbjct: 118 NAYSISLATAL-PLRLISWLLM-PISRLLVLLGNALTP--GRGFRNGPFASEIELREVVD 173
Query: 202 EGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNY 261
G+ E + +L D A +M PR ++ +I D + + + S ++
Sbjct: 174 LAQQRGVVAADERRMIESVFELGDTPAREVMVPRTEMIWIESDKTAGQAMTLAVRSGHSR 233
Query: 262 FPVYKKSISKIIGTLNTKTLFKKI-ISNRSIVNIDITSAIQPPLFIPETISTMQLLETFK 320
PV +++ I+G + K L ++ S + ++P +F+P++ LL +
Sbjct: 234 IPVIGENVDDIVGVVYLKDLVEQTFCSTNGGRETTVARVMRPAVFVPDSKPLDALLREMQ 293
Query: 321 KNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEE----IEFCEDGSWIISASMT 376
++++ ++L++DEYG + G+++I D++ ++G+I++ Y + +E D + +SA +
Sbjct: 294 RDRNHMALLVDEYGAIAGLVSIEDVLEEIVGEIADEYDQAETAPVEDLGDKRFRVSARLP 353
Query: 377 FDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKI 436
+ EL + + + + T+ G + LG +P I +++ +++
Sbjct: 354 IEDVGELYGVEFDDDLDVD----TVGGLLALELGRVPLPGAEVISHGLRLHAEGGTDHRG 409
Query: 437 ERLLVTIL 444
+ T+L
Sbjct: 410 RVRIGTVL 417
>sp|Q8K9M0|Y314_BUCAP UPF0053 protein BUsg_314 OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=BUsg_314 PE=3 SV=1
Length = 515
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 126/258 (48%), Gaps = 10/258 (3%)
Query: 187 KNDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDN 246
KN + T+ + + + F E + + L L + ++MTPR ++++N +
Sbjct: 264 KNRIKTDNKAEIVLSSSLETETFKDEEKYMINGVLTLAGRSIKSIMTPRSNISWVNTEKT 323
Query: 247 IEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDI-TSAIQ-PPL 304
I + +++LD+ +N FPV K + +IIG + K L I NID+ T A Q PP+
Sbjct: 324 INEIRLQLLDTPHNLFPVCKGELDEIIGIVRAKELLVAIEK-----NIDVYTFASQIPPI 378
Query: 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEFC 364
IP+T+ + LL ++ + +V +E+G ++G+IT D++ ++ G+ ++ +
Sbjct: 379 IIPDTLDPINLLGVLRRAQGSFVIVSNEFGVVQGLITPLDVLEAIAGEFPDADETPDIIK 438
Query: 365 EDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNI 424
E SW++ ++LL+ + + + +L G +++ G +P E +
Sbjct: 439 EQNSWLVKGETDLHSLQQLLNTK---ELIKQDDCASLGGLLISQKGQLPLPGETIKINSF 495
Query: 425 KIEVIDMNNNKIERLLVT 442
+++ +I+ + +T
Sbjct: 496 SFHIVNATEYRIDLVRIT 513
>sp|A8GUH1|HLYC_RICB8 Possible hemolysin C OS=Rickettsia bellii (strain OSU 85-389)
GN=tlyC PE=3 SV=1
Length = 302
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 127/241 (52%), Gaps = 14/241 (5%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + LKL + +M PR + I + NIE+ IK+ + +Y ++
Sbjct: 60 ERNILANLLKLKGKTIEDIMVPRSDIAAIKLTTNIEELNESIKV-KIPHTRTLIYDGTLD 118
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
I+G ++ K LFK +++ + N + I+ + ++ + LL ++ K+ +++VI
Sbjct: 119 NIVGFIHIKDLFKALVTKQ---NFRLKKLIRKHIIAAPSMKLLDLLAKMRREKTHIAIVI 175
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIEFCE----DGSWIIS-ASMTFDRFKELLS 385
DEYG +G++TI D++ +L+G I + + ++ E+ + S IIS A + + +E++
Sbjct: 176 DEYGGTDGLVTIEDVMEALVGRIDDEHDQKSEYDNYKVINNSTIISNARVEVEVLEEIIG 235
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
+ + T+ G V+T +G++P + + +NI+IEV D N ++++ +T+
Sbjct: 236 EK--LKDDDDDEFDTIGGLVLTKMGNVPAVGTKINVSENIEIEVTDANPRSLKQVKITLK 293
Query: 445 N 445
N
Sbjct: 294 N 294
>sp|Q1RGX2|HLYC_RICBR Possible hemolysin C OS=Rickettsia bellii (strain RML369-C) GN=tlyC
PE=3 SV=1
Length = 301
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 129/241 (53%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + LKL + +M PR + I + NIE+ IK+ + +Y ++
Sbjct: 60 ERNILANLLKLKGKTIEDIMVPRSDIAAIKLTTNIEELNESIKV-KIPHTRTLIYDGTLD 118
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
I+G ++ K LFK +++ + N + I+ + ++ + LL ++ K+ +++VI
Sbjct: 119 NIVGFIHIKDLFKALVTKQ---NFRLKKLIRKHIIAAPSMKLLDLLAKMRREKTHIAIVI 175
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIEFCE----DGSWIIS-ASMTFDRFKELLS 385
DEYG +G++TI D++ +L+G I + + ++ E+ + S IIS A + + +E++
Sbjct: 176 DEYGGTDGLVTIEDVMEALVGRIDDEHDQKSEYDNYKVINNSTIISNARVEVEVLEEIIG 235
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
++ + T++G V+T +G++P + + +NI+IEV D N ++++ +T+
Sbjct: 236 EKLKDD---DDEFDTISGLVLTKMGNVPAVGTKINVSENIEIEVTDANPRSLKQVKITLK 292
Query: 445 N 445
N
Sbjct: 293 N 293
>sp|Q9CM13|CORC_PASMU Magnesium and cobalt efflux protein CorC OS=Pasteurella multocida
(strain Pm70) GN=corC PE=3 SV=1
Length = 300
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 133/268 (49%), Gaps = 11/268 (4%)
Query: 184 KYKKNDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINI 243
++ + +L EE+ ++ R+ + ++ + +++ + +M PR ++ FI+
Sbjct: 27 RFFQGELKNREELVEVIRDSEQNELIDQNTREMIEGVMEIAELRVRDIMIPRSQIVFIHT 86
Query: 244 DDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPP 303
D N++ L I+ S+++ FPV I G L+ K L + + SN D+ ++P
Sbjct: 87 DQNLDSCLDTIIVSAHSRFPVITDERDNIAGILHAKDLLRFLRSNAE--EFDLMPLLRPA 144
Query: 304 LFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQE---- 359
+ +PE+ ++L+ F+ + +++V+DE+G + G++TI DI+ ++GDI + + E
Sbjct: 145 VIVPESKRVDRMLKDFRSERFHMAIVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEIV 204
Query: 360 EIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF 419
I ++ + A + F + + T+ G VM G++PK E
Sbjct: 205 NIRQLSRHTYAVRALTDIEDFNQQFNTHF-----ADEEVDTIGGVVMQAFGYLPKRGEEI 259
Query: 420 IWKNIKIEVIDMNNNKIERLLVTILNDK 447
+NI +V ++ ++ +L +T+ +++
Sbjct: 260 TIENIGFKVTSADSRRLIQLRITVTDEQ 287
>sp|P0AEC0|YOAE_ECOLI UPF0053 inner membrane protein YoaE OS=Escherichia coli (strain
K12) GN=yoaE PE=1 SV=1
Length = 518
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 125/234 (53%), Gaps = 17/234 (7%)
Query: 215 NLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIG 274
LASR+L+ +MTPR ++++++ + +++ ++L S ++ FPV + + +IIG
Sbjct: 294 TLASRSLR-------GIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIG 346
Query: 275 TLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYG 334
+ K L +++ V++ ++ P + +PET+ + LL ++ + +V +E+G
Sbjct: 347 IVRAKEL---LVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFG 403
Query: 335 ELEGIITINDIIHSLIGDISNSYQEEIEFCEDG-SWIISASMTFDRFKELLSNQVNFPVK 393
++G++T D++ ++ G+ ++ E E DG W++ ++ L + +
Sbjct: 404 VVQGLVTPLDVLEAIAGEFPDA-DETPEIITDGDGWLVKGGTDLHALQQALDVE---HLA 459
Query: 394 ISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERLLVTILNDK 447
+ T+AG V++ GHIP++ + + I +I+ N+ +++ LV I+ ++
Sbjct: 460 DDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVD--LVRIVKEQ 511
>sp|P0AEC1|YOAE_ECOL6 UPF0053 inner membrane protein YoaE OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=yoaE PE=3 SV=1
Length = 518
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 125/234 (53%), Gaps = 17/234 (7%)
Query: 215 NLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIG 274
LASR+L+ +MTPR ++++++ + +++ ++L S ++ FPV + + +IIG
Sbjct: 294 TLASRSLR-------GIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIG 346
Query: 275 TLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYG 334
+ K L +++ V++ ++ P + +PET+ + LL ++ + +V +E+G
Sbjct: 347 IVRAKEL---LVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFG 403
Query: 335 ELEGIITINDIIHSLIGDISNSYQEEIEFCEDG-SWIISASMTFDRFKELLSNQVNFPVK 393
++G++T D++ ++ G+ ++ E E DG W++ ++ L + +
Sbjct: 404 VVQGLVTPLDVLEAIAGEFPDA-DETPEIITDGDGWLVKGGTDLHALQQALDVE---HLA 459
Query: 394 ISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERLLVTILNDK 447
+ T+AG V++ GHIP++ + + I +I+ N+ +++ LV I+ ++
Sbjct: 460 DDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVD--LVRIVKEQ 511
>sp|P0AEC2|YOAE_ECO57 UPF0053 inner membrane protein YoaE OS=Escherichia coli O157:H7
GN=yoaE PE=3 SV=1
Length = 518
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 125/234 (53%), Gaps = 17/234 (7%)
Query: 215 NLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIG 274
LASR+L+ +MTPR ++++++ + +++ ++L S ++ FPV + + +IIG
Sbjct: 294 TLASRSLR-------GIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVCRGELDEIIG 346
Query: 275 TLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYG 334
+ K L +++ V++ ++ P + +PET+ + LL ++ + +V +E+G
Sbjct: 347 IVRAKEL---LVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGSFVIVTNEFG 403
Query: 335 ELEGIITINDIIHSLIGDISNSYQEEIEFCEDG-SWIISASMTFDRFKELLSNQVNFPVK 393
++G++T D++ ++ G+ ++ E E DG W++ ++ L + +
Sbjct: 404 VVQGLVTPLDVLEAIAGEFPDA-DETPEIITDGDGWLVKGGTDLHALQQALDVE---HLA 459
Query: 394 ISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERLLVTILNDK 447
+ T+AG V++ GHIP++ + + I +I+ N+ +++ LV I+ ++
Sbjct: 460 DDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVD--LVRIVKEQ 511
>sp|Q57368|CORC_HAEIN Magnesium and cobalt efflux protein CorC OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=corC PE=3
SV=1
Length = 299
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 132/266 (49%), Gaps = 13/266 (4%)
Query: 184 KYKKNDLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINI 243
++ + +L EE+ ++ R+ + ++ + +++ + +M PR ++ FI
Sbjct: 25 RFFQGELKNREELVEVIRDSEQNDLIDQNTREMIEGVMEIAELRVRDIMIPRSQIIFIED 84
Query: 244 DDNIEKNLIKILDSSYNYFPVYKKSISK--IIGTLNTKTLFKKIISNRSIVNIDITSAIQ 301
++ L I++S+++ FPV + + I+G L+ K L K + + + D++S ++
Sbjct: 85 QQDLNTCLNTIIESAHSRFPVIADADDRDNIVGILHAKDLLKFLREDAEV--FDLSSLLR 142
Query: 302 PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG----DISNSY 357
P + +PE+ ++L+ F+ + +++V+DE+G + G++TI DI+ ++G +
Sbjct: 143 PVVIVPESKRVDRMLKDFRSERFHMAIVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEE 202
Query: 358 QEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISE 417
+I ++ + A D F + + T+ G +M G++PK E
Sbjct: 203 IADIRQLSRHTYAVRALTDIDDFNAQFNTDFD-----DEEVDTIGGLIMQTFGYLPKRGE 257
Query: 418 NFIWKNIKIEVIDMNNNKIERLLVTI 443
I KN++ +V ++ ++ +L VT+
Sbjct: 258 EIILKNLQFKVTSADSRRLIQLRVTV 283
>sp|P57408|Y323_BUCAI UPF0053 protein BU323 OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=BU323 PE=3 SV=1
Length = 521
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 216 LASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGT 275
LA R+++ ++MTPR ++++N + N ++ +++LD+ ++ FPV K + +IIG
Sbjct: 302 LAGRSIR-------SIMTPRSNISWVNTEKNTDEIRMQLLDTPHSLFPVCKGELDEIIGI 354
Query: 276 LNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGE 335
+ K L I + I +S I P + IP+T+ ++LL ++ + +V +E+G
Sbjct: 355 VRAKELLVAI--EKKIDASTFSSKILP-IIIPDTLDPIKLLGVLRRAQGSFVIVSNEFGV 411
Query: 336 LEGIITINDIIHSLIGDISNSYQEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKIS 395
++G+IT D++ ++ G+ ++ + E+ SW++ ++LL+ + +
Sbjct: 412 VQGLITPLDVLEAIAGEFPDADETPDIIQENNSWLVKGETDLHSLQQLLNTE---ELIKE 468
Query: 396 RNYHTLAGFVMTFLGHIP 413
NY +L G ++ G +P
Sbjct: 469 DNYASLGGLLIAQKGQLP 486
>sp|Q4UK99|HLYC_RICFE Hemolysin C OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=tlyC PE=3 SV=1
Length = 299
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + L+L+D+ +M PR + I + N+E+ IK L+ + +Y ++
Sbjct: 61 ERNILANLLELEDKTIEDIMVPRSDIAAIKLTTNLEELSESIK-LEVPHTRTLIYDGTLD 119
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 120 NVVGFIHIKDLFKALATKQ---NGRLKKLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVV 176
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIEFCE----DGSWIIS-ASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + S IIS A + + +E++
Sbjct: 177 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSDNFKVINNSTIISNARVEVEVLEEIIG 236
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
++ + T+ G V+T +G +P I I +NI+IEV D ++++ + +
Sbjct: 237 EKLKND---DDEFDTIGGLVLTRVGSVPAIGTRIDISENIEIEVTDATPRSLKQVKIRLK 293
Query: 445 N 445
N
Sbjct: 294 N 294
>sp|O05961|HLYC_RICPR Hemolysin C OS=Rickettsia prowazekii (strain Madrid E) GN=tlyC PE=2
SV=1
Length = 303
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E+N+ + LKL+D+ +M PR + I + N+E+ IKI + +Y ++
Sbjct: 62 EFNILANLLKLEDKIVEDIMVPRSDIIAIKLTTNLEELSESIKIA-VPHTRTLIYDGTLD 120
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 121 NVVGFIHIKDLFKALATKQ---NSPLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVV 177
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIEFC-----EDGSWIISASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + + I +A + + +E++
Sbjct: 178 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSANFKVINNSTIIANARIEVELLEEIIG 237
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
++ + T+ G V+T + +P I I +NI+IEV D ++++ + +
Sbjct: 238 EKLKND---DDEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVKIRLK 294
Query: 445 N 445
N
Sbjct: 295 N 295
>sp|Q9KTE3|CORC_VIBCH Magnesium and cobalt efflux protein CorC OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=corC PE=3 SV=1
Length = 291
Score = 79.3 bits (194), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 107/218 (49%), Gaps = 13/218 (5%)
Query: 231 LMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRS 290
+M PR ++ I+ N++ + + D+ ++ +PV + + G L K L K + SN +
Sbjct: 70 IMIPRSQMVTIDRTHNLDALVAIMTDAQHSRYPVISEDKDHVEGILLAKDLLKYLGSNCA 129
Query: 291 IVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLI 350
NI I+P + +PE+ +LL+ F++ + +++V+DE+G + G++TI DI+ ++
Sbjct: 130 PFNI--QEVIRPAVVVPESKRVDRLLKEFREERYHMAIVVDEFGGVSGLVTIEDILEEIV 187
Query: 351 G----DISNSYQEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKIS-RNYHTLAGFV 405
G + + Q++I ++ + A T + F F K S T+ G V
Sbjct: 188 GDIEDEFDDEEQKDIRQLSKHTFSVKALTTIEDFNH------TFGTKFSDEEVDTVGGLV 241
Query: 406 MTFLGHIPKISENFIWKNIKIEVIDMNNNKIERLLVTI 443
MT GH+P E +V ++ ++ L VT+
Sbjct: 242 MTAFGHLPARGEVVDIAGYNFKVTAADSRRVVALQVTV 279
>sp|A8EZU0|HLYC_RICCK Possible hemolysin C OS=Rickettsia canadensis (strain McKiel)
GN=tlyC PE=3 SV=1
Length = 298
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 124/241 (51%), Gaps = 16/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + LK+ D+ +M PR + I + N+E+ IK L + +Y ++
Sbjct: 61 ECNIFANLLKIKDKTIADIMVPRSDIAAIKLTTNLEELSESIK-LKVLHARTLIYDGTLD 119
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 120 NVVGFIHIKDLFKAFATKQ---NGCLKKLIRKHIIAAPSMKLLDLLTKMRRERTHIAIVV 176
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIE-----FCEDGSWIISASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + + I++A + + +E++
Sbjct: 177 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSDNLKVINNSTIILNARVEVEVLEEIIG 236
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
+ +K + T+ G V+T +G +P I I +NI+IEV D ++++ + +
Sbjct: 237 EK----LKNDDEFDTIGGLVLTRVGSVPAIGTRINISENIEIEVTDATPRSLKQVKIRLK 292
Query: 445 N 445
N
Sbjct: 293 N 293
>sp|Q89AC1|CORC_BUCBP Magnesium and cobalt efflux protein CorC OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=corC PE=3 SV=1
Length = 282
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Query: 231 LMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRS 290
+M PR ++ + + ++E+ L I S ++ FPV ++ + + G L TK L I +N
Sbjct: 71 IMIPRPQMITLKLTYSLEQCLDVITKSLHSRFPVMSENENYVEGFLITKDLLPFIKNNTE 130
Query: 291 IVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLI 350
+ I ++P + +PE+ +L+ F+ K+ +++VIDE+G + G++TI DI+ ++
Sbjct: 131 MFCI--KKILRPAIVVPESKHVNHMLKEFRLTKNHMAIVIDEFGVVSGLVTIEDILELIV 188
Query: 351 GDISNSYQE-EIEFCE--DGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMT 407
G+I + Y E + C+ ++II + + F E + N T+ G VM
Sbjct: 189 GNIEDEYDETKKNICQLNQSTFIIKSLTSIKEFNETFNTNFN-----DEEVDTIGGLVMK 243
Query: 408 FLGHIPKISENFIWKNIKIEVIDMNNNKIERLLVTI 443
+GH+P E K ++ NN +I L VTI
Sbjct: 244 KIGHLPIRGEYININQYKFKIHIANNRRIILLQVTI 279
>sp|Q92GI2|HLYC_RICCN Hemolysin C homolog OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=tlyC PE=3 SV=1
Length = 299
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + L+L+D+ +M PR + I + N+E+ IK L+ + +Y ++
Sbjct: 61 ERNILANLLELEDKTIEDIMVPRSDIAAIKLTTNLEELSESIK-LEVPHTRTLIYDGTLD 119
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 120 NVVGFIHIKDLFKALATKQ---NGRLKKLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVV 176
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIE-----FCEDGSWIISASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + + I +A + + +E++
Sbjct: 177 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSDNFKVINNSTIIANARVEVEVLEEIIG 236
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
+++ + T+ G V+T + +P I I +NI+IEV D ++++ + +
Sbjct: 237 EKLHNDYD---EFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVKIRLK 293
Query: 445 N 445
N
Sbjct: 294 N 294
>sp|A8GTI4|HLYC_RICRS Hemolysin C homolog OS=Rickettsia rickettsii (strain Sheila Smith)
GN=tlyC PE=3 SV=1
Length = 299
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 126/241 (52%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + L+L+D+ +M PR + I + N+E+ IK L+ + +Y ++
Sbjct: 61 ERNILANLLELEDKTIEDIMVPRSDIAAIKLTTNLEELSESIK-LEVPHTRTLIYDGTLD 119
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 120 NVVGFIHIKDLFKALATKQ---NGRLKKLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVV 176
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIEFCE----DGSWIIS-ASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + S IIS A + + +E++
Sbjct: 177 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSDNFKVINNSTIISNARVEVEVLEEIIG 236
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
+++ + T+ G V+T + +P I I +NI+IEV D ++++ + +
Sbjct: 237 EKLHNDYD---EFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVKIRLK 293
Query: 445 N 445
N
Sbjct: 294 N 294
>sp|Q68W10|HLYC_RICTY Hemolysin C OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=tlyC PE=1 SV=1
Length = 305
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + L+L+++ +M PR + I + N+ + IKI + + +Y ++
Sbjct: 62 ECNILANLLQLENKTVEDIMVPRSDIVAIKLTTNLAELSESIKI-EVPHTRTLIYDGTLD 120
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 121 NVVGFIHIKDLFKALATKQ---NSTLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVV 177
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIE-----FCEDGSWIISASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + + I +A + + +E++
Sbjct: 178 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSTNFKVINNSTIIANARIEVELLEEIIK 237
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
++ + T+ G V+T + +P I I +NI+IEVID ++++ + +
Sbjct: 238 EKIKND---DDEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVIDATPRSLKQVKIRLK 294
Query: 445 N 445
N
Sbjct: 295 N 295
>sp|P0AE81|CORC_SHIFL Magnesium and cobalt efflux protein CorC OS=Shigella flexneri
GN=corC PE=3 SV=1
Length = 292
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 194 EEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK 253
+E+ L R+ + ++ ++ + + DQ +M PR ++ + + +++ L
Sbjct: 35 DELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDV 94
Query: 254 ILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTM 313
I++S+++ FPV + I G L K L + S+ ++D ++ + +PE+
Sbjct: 95 IIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMD--KVLRQAVVVPESKRVD 152
Query: 314 QLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEF----CEDGSW 369
++L+ F+ + +++VIDE+G + G++TI DI+ ++G+I + Y EE + +W
Sbjct: 153 RMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTW 212
Query: 370 IISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVI 429
+ A + + F E + T+ G VM GH+P E + +V
Sbjct: 213 TVRALASIEDFNEAFGTHFS-----DEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVA 267
Query: 430 DMNNNKIERLLVTILND 446
++ +I ++ V I +D
Sbjct: 268 MADSRRIIQVHVKIPDD 284
>sp|P0AE78|CORC_ECOLI Magnesium and cobalt efflux protein CorC OS=Escherichia coli
(strain K12) GN=corC PE=3 SV=1
Length = 292
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 194 EEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK 253
+E+ L R+ + ++ ++ + + DQ +M PR ++ + + +++ L
Sbjct: 35 DELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDV 94
Query: 254 ILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTM 313
I++S+++ FPV + I G L K L + S+ ++D ++ + +PE+
Sbjct: 95 IIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMD--KVLRQAVVVPESKRVD 152
Query: 314 QLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEF----CEDGSW 369
++L+ F+ + +++VIDE+G + G++TI DI+ ++G+I + Y EE + +W
Sbjct: 153 RMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTW 212
Query: 370 IISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVI 429
+ A + + F E + T+ G VM GH+P E + +V
Sbjct: 213 TVRALASIEDFNEAFGTHFS-----DEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVA 267
Query: 430 DMNNNKIERLLVTILND 446
++ +I ++ V I +D
Sbjct: 268 MADSRRIIQVHVKIPDD 284
>sp|P0AE79|CORC_ECOL6 Magnesium and cobalt efflux protein CorC OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=corC PE=3 SV=1
Length = 292
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 194 EEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK 253
+E+ L R+ + ++ ++ + + DQ +M PR ++ + + +++ L
Sbjct: 35 DELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDV 94
Query: 254 ILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTM 313
I++S+++ FPV + I G L K L + S+ ++D ++ + +PE+
Sbjct: 95 IIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMD--KVLRQAVVVPESKRVD 152
Query: 314 QLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEF----CEDGSW 369
++L+ F+ + +++VIDE+G + G++TI DI+ ++G+I + Y EE + +W
Sbjct: 153 RMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTW 212
Query: 370 IISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVI 429
+ A + + F E + T+ G VM GH+P E + +V
Sbjct: 213 TVRALASIEDFNEAFGTHFS-----DEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVA 267
Query: 430 DMNNNKIERLLVTILND 446
++ +I ++ V I +D
Sbjct: 268 MADSRRIIQVHVKIPDD 284
>sp|P0AE80|CORC_ECO57 Magnesium and cobalt efflux protein CorC OS=Escherichia coli
O157:H7 GN=corC PE=3 SV=1
Length = 292
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 194 EEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK 253
+E+ L R+ + ++ ++ + + DQ +M PR ++ + + +++ L
Sbjct: 35 DELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDV 94
Query: 254 ILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTM 313
I++S+++ FPV + I G L K L + S+ ++D ++ + +PE+
Sbjct: 95 IIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMD--KVLRQAVVVPESKRVD 152
Query: 314 QLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEF----CEDGSW 369
++L+ F+ + +++VIDE+G + G++TI DI+ ++G+I + Y EE + +W
Sbjct: 153 RMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTW 212
Query: 370 IISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVI 429
+ A + + F E + T+ G VM GH+P E + +V
Sbjct: 213 TVRALASIEDFNEAFGTHFS-----DEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVA 267
Query: 430 DMNNNKIERLLVTILND 446
++ +I ++ V I +D
Sbjct: 268 MADSRRIIQVHVKIPDD 284
>sp|A8F2M1|HLYC_RICM5 Hemolysin C homolog OS=Rickettsia massiliae (strain Mtu5) GN=tlyC
PE=3 SV=2
Length = 299
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 124/241 (51%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + L+L+ + +M PR + I + N+E+ IK L+ + +Y ++
Sbjct: 61 ERNILANLLELEYKTIEDIMVPRSDIAAIKLTTNLEELSESIK-LEVPHTRTLIYDGTLD 119
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 120 NVVGFIHIKDLFKALATKQ---NGRLKKLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVV 176
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIEFCE----DGSWIIS-ASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + S IIS A + + +E++
Sbjct: 177 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSDNFKVINNSTIISNARVEVEVLEEIIG 236
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
++ + T+ G V+T + +P I I +NI+IEV D ++++ + +
Sbjct: 237 EKLQND---DDEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVKIRLK 293
Query: 445 N 445
N
Sbjct: 294 N 294
>sp|A8GPR9|HLYC_RICAH Possible hemolysin C OS=Rickettsia akari (strain Hartford) GN=tlyC
PE=3 SV=1
Length = 301
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 123/241 (51%), Gaps = 15/241 (6%)
Query: 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEK--NLIKILDSSYNYFPVYKKSIS 270
E N+ + L+L+D+ +M PR + I + N+ + IK L+ + +Y ++
Sbjct: 61 ERNILANLLELEDKTIEDIMVPRSDIVAIKLTANLAELSESIK-LEVPHTRTLIYDGTLD 119
Query: 271 KIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVI 330
++G ++ K LFK + + + N + I+ + ++ + LL ++ ++ +++V+
Sbjct: 120 NVVGFIHIKDLFKALATKQ---NGRLKKLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVV 176
Query: 331 DEYGELEGIITINDIIHSLIGDISNSYQEEIE-----FCEDGSWIISASMTFDRFKELLS 385
DEYG +G++TI D+I ++G I + + ++++ + + I +A + + +E++
Sbjct: 177 DEYGGTDGLVTIEDLIEEIVGRIDDEHDQQLDSDNFKVINNSTIISNARVEVEVLEEIIG 236
Query: 386 NQVNFPVKISRNYHTLAGFVMTFLGHIPKISENF-IWKNIKIEVIDMNNNKIERLLVTIL 444
++ + T+ G V+T + +P I I +NI+IEV D ++++ + +
Sbjct: 237 EKLKND---DDEFDTIGGLVLTRVSSVPVIGTRIDISENIEIEVTDATPRSLKQVKIRLK 293
Query: 445 N 445
N
Sbjct: 294 N 294
>sp|P0A2L3|CORC_SALTY Magnesium and cobalt efflux protein CorC OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=corC PE=1 SV=1
Length = 292
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 194 EEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK 253
+E+ L R+ + ++ ++ + + DQ +M PR ++ + + +++ L
Sbjct: 35 DELLALIRDSGQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDV 94
Query: 254 ILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTM 313
I++S+++ FPV + I G L K L + S+ ++D ++ + +PE+
Sbjct: 95 IIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMD--KVLRTAVVVPESKRVD 152
Query: 314 QLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEF----CEDGSW 369
++L+ F+ + +++VIDE+G + G++TI DI+ ++G+I + Y EE + +W
Sbjct: 153 RMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTW 212
Query: 370 IISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVI 429
I A + + F + + T+ G VM GH+P E + +V
Sbjct: 213 TIRALASIEDFNDAFGTHFS-----DEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVA 267
Query: 430 DMNNNKIERLLVTILND 446
++ +I ++ V I +D
Sbjct: 268 MADSRRIIQVHVRIPDD 284
>sp|P0A2L4|CORC_SALTI Magnesium and cobalt efflux protein CorC OS=Salmonella typhi
GN=corC PE=3 SV=1
Length = 292
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 123/257 (47%), Gaps = 11/257 (4%)
Query: 194 EEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIK 253
+E+ L R+ + ++ ++ + + DQ +M PR ++ + + +++ L
Sbjct: 35 DELLALIRDSGQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDV 94
Query: 254 ILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTM 313
I++S+++ FPV + I G L K L + S+ ++D ++ + +PE+
Sbjct: 95 IIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMD--KVLRTAVVVPESKRVD 152
Query: 314 QLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEF----CEDGSW 369
++L+ F+ + +++VIDE+G + G++TI DI+ ++G+I + Y EE + +W
Sbjct: 153 RMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTW 212
Query: 370 IISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVI 429
I A + + F + + T+ G VM GH+P E + +V
Sbjct: 213 TIRALASIEDFNDAFGTHFS-----DEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVA 267
Query: 430 DMNNNKIERLLVTILND 446
++ +I ++ V I +D
Sbjct: 268 MADSRRIIQVHVRIPDD 284
>sp|Q49399|Y146_MYCGE UPF0053 protein MG146 OS=Mycoplasma genitalium (strain ATCC 33530 /
G-37 / NCTC 10195) GN=MG146 PE=3 SV=1
Length = 424
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 167/356 (46%), Gaps = 32/356 (8%)
Query: 24 IRLIFLNGIFSMSEIAIITSKRVRLKKLIEKGS-IGALSALILSENPIHFFSTVQIGITL 82
I L F++ + S E AI + R K I+ + LS I++ H+ S L
Sbjct: 18 ILLAFISTVVSAYETAITSLTPYRWKNYIKTNNKQDKLSTKIINHFQNHYSSC------L 71
Query: 83 ISIFNGAFGESSLVASLTPKIRFFSLMRDHAHEI---SLVIVVFSITFFSLIFGELIPKR 139
I+I +++VA + I F +L + +E+ L +VV + S F E++PK
Sbjct: 72 ITIL----ITNNIVAIMVSNILFLALEQTIKNELLSSVLNLVVSGVLIVS--FCEILPKT 125
Query: 140 IAMQYSEKAASIISPLMLFLLKLMGPFVKILTISTESILDIFNIKYKKNDLITEEEIYKL 199
+ + + + L+ F + P K+ T IL KY+ ++ +++Y
Sbjct: 126 LGRINVIRTLVLFAYLVYFFYLIFWPITKL----TSLILK----KYENPLPVSRKDVYYF 177
Query: 200 FREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLI--KILDS 257
E G+F+K + L + L D +M KV + ++D+I NLI + L
Sbjct: 178 IDEIEQNGLFSKEDSLLIKKTLIFDQVLVKKVMIKWKKVAYCYLNDSI--NLIAKQFLQR 235
Query: 258 SYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLE 317
++ PV K+ +KI+G ++ K F +N ++D+ + P + + ++ Q L
Sbjct: 236 QFSRMPVVDKTTNKIVGFIHLKDFFTAKEANPK--SLDLNQLLYPVVLVQDSTPIKQALR 293
Query: 318 TFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQ--EEIEFCEDGSWII 371
+ N++ L++V D++ + GI+++ DII L+G+I + + + I+ ++ W++
Sbjct: 294 QMRLNRAHLAVVNDKHEKTIGIVSMEDIIEELVGEIYDEHDDIQPIQVLDENVWLV 349
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.141 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,901,563
Number of Sequences: 539616
Number of extensions: 5830161
Number of successful extensions: 17217
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 16980
Number of HSP's gapped (non-prelim): 157
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)