Query psy2372
Match_columns 447
No_of_seqs 287 out of 2607
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 23:17:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 100.0 5.2E-29 1.8E-33 225.1 14.8 164 189-355 5-169 (172)
2 3oi8_A Uncharacterized protein 100.0 5E-28 1.7E-32 215.1 14.7 155 190-347 2-156 (156)
3 3ocm_A Putative membrane prote 99.9 2.5E-27 8.4E-32 214.8 15.3 161 199-363 9-170 (173)
4 3lv9_A Putative transporter; C 99.9 7.7E-26 2.6E-30 198.6 15.0 146 205-353 2-147 (148)
5 3oco_A Hemolysin-like protein 99.9 4.1E-25 1.4E-29 195.3 9.5 145 209-356 3-149 (153)
6 3hf7_A Uncharacterized CBS-dom 99.9 1.1E-23 3.6E-28 181.3 12.4 129 225-353 1-129 (130)
7 3jtf_A Magnesium and cobalt ef 99.9 4.3E-23 1.5E-27 177.0 13.6 127 223-353 2-128 (129)
8 3lfr_A Putative metal ION tran 99.9 2E-23 6.8E-28 180.9 11.5 131 225-356 2-133 (136)
9 3i8n_A Uncharacterized protein 99.9 4.7E-23 1.6E-27 176.9 11.0 129 222-352 2-130 (130)
10 3nqr_A Magnesium and cobalt ef 99.9 1.5E-22 5.2E-27 173.0 12.6 126 225-352 2-127 (127)
11 3k6e_A CBS domain protein; str 99.9 8.5E-22 2.9E-26 175.3 12.1 126 225-353 14-144 (156)
12 3kxr_A Magnesium transporter, 99.8 1.8E-20 6.2E-25 174.3 16.2 139 208-355 36-178 (205)
13 2zy9_A Mg2+ transporter MGTE; 99.8 1.7E-21 5.9E-26 203.0 8.8 205 189-410 109-330 (473)
14 2pli_A Uncharacterized protein 99.8 1.8E-20 6.3E-25 151.4 12.5 83 357-444 8-90 (91)
15 3ded_A Probable hemolysin; str 99.8 1.7E-20 5.7E-25 157.4 12.2 93 351-443 16-111 (113)
16 3llb_A Uncharacterized protein 99.8 1.8E-20 6.3E-25 148.8 11.8 81 360-445 2-82 (83)
17 3lae_A UPF0053 protein HI0107; 99.8 2.2E-20 7.4E-25 147.7 12.1 80 360-444 2-81 (81)
18 2oai_A Hemolysin; PFAM03471, x 99.8 2.3E-20 8E-25 151.7 11.7 86 357-444 8-93 (94)
19 2p13_A CBS domain; alpha-beta 99.8 2.1E-20 7E-25 150.8 10.5 84 358-444 6-89 (90)
20 2yvy_A MGTE, Mg2+ transporter 99.8 5.3E-20 1.8E-24 178.9 14.6 156 190-354 90-260 (278)
21 2r2z_A Hemolysin; APC85144, en 99.8 4.6E-20 1.6E-24 149.8 11.5 83 358-445 7-91 (93)
22 2p4p_A Hypothetical protein HD 99.8 7.3E-20 2.5E-24 146.4 11.6 82 361-446 3-85 (86)
23 2o3g_A Putative protein; APC85 99.8 1.7E-19 5.8E-24 146.1 9.8 84 358-444 8-91 (92)
24 2rk5_A Putative hemolysin; str 99.8 4.1E-19 1.4E-23 142.3 11.7 79 361-444 2-86 (87)
25 2pls_A CBS domain protein; APC 99.8 5E-19 1.7E-23 141.5 12.1 84 360-444 2-85 (86)
26 4esy_A CBS domain containing m 99.8 2.8E-19 9.4E-24 160.6 11.3 134 213-352 7-163 (170)
27 2nqw_A CBS domain protein; PFA 99.8 6.9E-19 2.4E-23 142.8 10.7 85 358-444 6-92 (93)
28 3ctu_A CBS domain protein; str 99.8 1.5E-18 5.3E-23 153.0 11.2 132 219-353 8-144 (156)
29 2oux_A Magnesium transporter; 99.8 3.5E-18 1.2E-22 166.8 14.5 138 207-353 118-261 (286)
30 3lqn_A CBS domain protein; csg 99.8 1.5E-18 5.1E-23 152.0 10.3 129 222-353 11-145 (150)
31 3fhm_A Uncharacterized protein 99.8 2.2E-18 7.7E-23 153.8 11.3 134 218-353 16-152 (165)
32 4gqw_A CBS domain-containing p 99.8 3.6E-18 1.2E-22 149.1 12.2 129 224-353 3-145 (152)
33 2emq_A Hypothetical conserved 99.8 3.9E-18 1.3E-22 150.3 12.4 134 217-353 2-141 (157)
34 2yzi_A Hypothetical protein PH 99.8 1.1E-17 3.7E-22 144.2 14.1 128 221-353 2-131 (138)
35 3kpb_A Uncharacterized protein 99.8 5.3E-18 1.8E-22 142.9 11.6 119 226-351 1-120 (122)
36 2qrd_G Protein C1556.08C; AMPK 99.7 6.2E-18 2.1E-22 167.6 13.2 145 208-352 3-173 (334)
37 2rc3_A CBS domain; in SITU pro 99.7 8.7E-18 3E-22 144.4 12.3 123 227-352 7-132 (135)
38 2ef7_A Hypothetical protein ST 99.7 2.1E-17 7.1E-22 141.5 14.4 126 223-353 1-127 (133)
39 2p3h_A Uncharacterized CBS dom 99.7 1.5E-18 5.1E-23 142.3 6.8 81 359-445 4-89 (101)
40 3k2v_A Putative D-arabinose 5- 99.7 6.3E-18 2.2E-22 148.2 10.5 120 226-347 28-148 (149)
41 3sl7_A CBS domain-containing p 99.7 8.5E-18 2.9E-22 151.3 11.1 128 225-353 3-158 (180)
42 2rih_A Conserved protein with 99.7 2.9E-17 9.9E-22 142.3 13.8 121 226-351 5-128 (141)
43 3t4n_C Nuclear protein SNF4; C 99.7 4.6E-18 1.6E-22 167.7 9.6 180 205-384 8-216 (323)
44 3gby_A Uncharacterized protein 99.7 1.3E-17 4.5E-22 142.2 11.1 123 224-351 3-126 (128)
45 3fv6_A YQZB protein; CBS domai 99.7 3.3E-17 1.1E-21 145.2 13.9 125 223-351 14-144 (159)
46 1pbj_A Hypothetical protein; s 99.7 2.8E-17 9.7E-22 138.8 12.8 121 226-351 1-122 (125)
47 2p9m_A Hypothetical protein MJ 99.7 3E-17 1E-21 141.3 12.7 127 223-353 5-138 (138)
48 1y5h_A Hypothetical protein RV 99.7 1E-17 3.5E-22 143.4 9.5 126 223-352 5-132 (133)
49 1yav_A Hypothetical protein BS 99.7 1.7E-17 5.9E-22 146.9 11.1 129 222-353 10-144 (159)
50 2v8q_E 5'-AMP-activated protei 99.7 2.4E-17 8.3E-22 163.1 13.0 183 200-384 11-219 (330)
51 1o50_A CBS domain-containing p 99.7 5.9E-17 2E-21 143.2 14.0 128 222-353 12-155 (157)
52 4fry_A Putative signal-transdu 99.7 5.4E-17 1.9E-21 143.2 12.7 125 226-353 7-137 (157)
53 2nyc_A Nuclear protein SNF4; b 99.7 1.2E-16 4.1E-21 138.2 12.7 126 223-351 5-141 (144)
54 2uv4_A 5'-AMP-activated protei 99.7 1.1E-16 3.9E-21 140.6 12.4 124 223-351 20-151 (152)
55 2o16_A Acetoin utilization pro 99.7 9.5E-17 3.3E-21 142.5 11.8 126 224-353 3-137 (160)
56 1pvm_A Conserved hypothetical 99.7 1.2E-16 4.2E-21 145.1 12.2 125 226-353 9-136 (184)
57 3ddj_A CBS domain-containing p 99.7 1E-16 3.4E-21 156.1 11.2 183 190-384 64-253 (296)
58 2pfi_A Chloride channel protei 99.7 2.5E-16 8.4E-21 139.4 12.5 132 219-353 6-149 (164)
59 2j9l_A Chloride channel protei 99.7 1.3E-16 4.4E-21 144.3 10.8 130 223-353 8-167 (185)
60 3kh5_A Protein MJ1225; AMPK, A 99.6 4.1E-16 1.4E-20 149.8 11.5 154 190-351 51-205 (280)
61 4fxs_A Inosine-5'-monophosphat 99.6 6.6E-17 2.3E-21 169.0 5.9 148 189-349 52-207 (496)
62 3usb_A Inosine-5'-monophosphat 99.6 1.6E-15 5.5E-20 159.1 14.4 151 189-351 76-234 (511)
63 3org_A CMCLC; transporter, tra 99.6 6.1E-17 2.1E-21 174.5 3.6 126 224-351 451-625 (632)
64 1zfj_A Inosine monophosphate d 99.6 1.9E-15 6.6E-20 158.2 14.2 151 189-351 53-211 (491)
65 3kh5_A Protein MJ1225; AMPK, A 99.6 4.4E-15 1.5E-19 142.6 14.5 125 227-353 4-144 (280)
66 1vr9_A CBS domain protein/ACT 99.6 3.6E-15 1.2E-19 139.0 13.0 120 225-353 12-132 (213)
67 3t4n_C Nuclear protein SNF4; C 99.6 2.7E-15 9.2E-20 147.8 12.5 128 222-352 183-321 (323)
68 2yzq_A Putative uncharacterize 99.6 1.7E-15 5.9E-20 145.9 9.8 149 226-385 1-153 (282)
69 2cu0_A Inosine-5'-monophosphat 99.6 1.5E-16 5E-21 166.5 1.6 167 189-378 56-228 (486)
70 3ddj_A CBS domain-containing p 99.6 3.8E-15 1.3E-19 144.9 11.2 128 223-353 153-287 (296)
71 3l2b_A Probable manganase-depe 99.6 5.2E-15 1.8E-19 140.5 11.5 122 225-349 6-242 (245)
72 2d4z_A Chloride channel protei 99.6 1.3E-14 4.5E-19 138.6 13.3 127 222-351 9-246 (250)
73 1me8_A Inosine-5'-monophosphat 99.6 5.2E-16 1.8E-20 162.8 2.5 153 189-353 60-223 (503)
74 3pc3_A CG1753, isoform A; CBS, 99.6 6.2E-15 2.1E-19 155.7 10.6 126 223-352 381-512 (527)
75 2qrd_G Protein C1556.08C; AMPK 99.5 3.9E-14 1.3E-18 140.1 13.9 127 224-353 180-317 (334)
76 4avf_A Inosine-5'-monophosphat 99.5 9.8E-16 3.4E-20 160.0 2.0 147 189-349 51-205 (490)
77 2yzq_A Putative uncharacterize 99.5 5E-14 1.7E-18 135.6 11.3 125 224-351 124-279 (282)
78 2v8q_E 5'-AMP-activated protei 99.5 2.6E-13 8.9E-18 134.0 15.0 125 226-352 190-324 (330)
79 1vrd_A Inosine-5'-monophosphat 99.3 3.9E-13 1.3E-17 140.8 1.6 128 213-353 87-217 (494)
80 4af0_A Inosine-5'-monophosphat 99.2 4E-12 1.4E-16 130.9 1.4 146 189-349 101-256 (556)
81 1jcn_A Inosine monophosphate d 99.2 7.1E-13 2.4E-17 139.5 -5.2 119 227-350 109-232 (514)
82 1vr9_A CBS domain protein/ACT 98.8 2.8E-09 9.7E-14 98.8 4.1 138 190-335 29-175 (213)
83 3ghd_A A cystathionine beta-sy 98.8 2E-08 6.8E-13 76.4 8.1 67 238-306 2-70 (70)
84 3fio_A A cystathionine beta-sy 98.6 1.2E-07 4.1E-12 71.2 8.4 63 238-302 2-65 (70)
85 3fv6_A YQZB protein; CBS domai 98.5 2.9E-07 1E-11 80.7 9.2 91 294-384 17-109 (159)
86 4esy_A CBS domain containing m 98.4 3.5E-07 1.2E-11 81.1 5.6 57 294-350 18-75 (170)
87 3kpb_A Uncharacterized protein 98.3 1.4E-06 4.8E-11 72.2 7.7 86 295-384 2-88 (122)
88 3lqn_A CBS domain protein; csg 98.3 1.6E-06 5.6E-11 74.7 8.1 91 294-384 15-113 (150)
89 2yzi_A Hypothetical protein PH 98.3 3.9E-06 1.3E-10 71.2 10.3 89 294-384 7-98 (138)
90 3fio_A A cystathionine beta-sy 98.3 1.3E-06 4.5E-11 65.3 6.4 50 302-352 1-50 (70)
91 3ghd_A A cystathionine beta-sy 98.3 1.6E-06 5.3E-11 65.8 6.4 49 303-352 2-50 (70)
92 3k2v_A Putative D-arabinose 5- 98.2 2.4E-06 8.1E-11 73.8 8.2 89 294-384 28-121 (149)
93 3lv9_A Putative transporter; C 98.2 3.2E-06 1.1E-10 72.9 8.6 87 294-384 23-113 (148)
94 2p9m_A Hypothetical protein MJ 98.2 3.6E-06 1.2E-10 71.3 8.8 90 294-385 8-100 (138)
95 4fry_A Putative signal-transdu 98.2 1.3E-06 4.6E-11 76.0 5.9 74 223-300 75-148 (157)
96 2rih_A Conserved protein with 98.2 6.2E-06 2.1E-10 70.3 9.9 88 294-384 5-96 (141)
97 2ef7_A Hypothetical protein ST 98.2 6.1E-06 2.1E-10 69.5 9.4 88 294-384 4-93 (133)
98 3fhm_A Uncharacterized protein 98.2 1.9E-06 6.7E-11 75.8 6.4 58 294-351 24-85 (165)
99 2o16_A Acetoin utilization pro 98.2 6.2E-06 2.1E-10 72.2 9.6 91 294-384 5-104 (160)
100 3nqr_A Magnesium and cobalt ef 98.2 2E-06 6.7E-11 72.2 6.0 88 294-384 3-94 (127)
101 3ctu_A CBS domain protein; str 98.2 1.7E-06 6E-11 75.2 5.8 90 294-385 15-113 (156)
102 3gby_A Uncharacterized protein 98.2 1.8E-06 6.1E-11 72.6 5.7 57 294-351 5-62 (128)
103 3l2b_A Probable manganase-depe 98.2 3.7E-06 1.3E-10 79.0 8.3 59 294-352 7-66 (245)
104 3k6e_A CBS domain protein; str 98.2 2.4E-06 8.1E-11 75.1 6.3 91 294-384 15-112 (156)
105 3hf7_A Uncharacterized CBS-dom 98.1 3.4E-06 1.2E-10 71.3 6.7 88 294-384 2-95 (130)
106 1pbj_A Hypothetical protein; s 98.1 4.3E-06 1.5E-10 69.5 7.2 87 295-384 2-91 (125)
107 2emq_A Hypothetical conserved 98.1 8.9E-06 3.1E-10 70.5 9.4 89 294-384 11-109 (157)
108 3lfr_A Putative metal ION tran 98.1 4E-06 1.4E-10 71.3 6.8 88 294-384 3-95 (136)
109 3jtf_A Magnesium and cobalt ef 98.1 2.9E-06 9.8E-11 71.5 5.7 86 294-384 5-94 (129)
110 3ocm_A Putative membrane prote 98.1 7.3E-06 2.5E-10 73.1 8.7 137 273-418 16-165 (173)
111 1y5h_A Hypothetical protein RV 98.1 3.4E-06 1.2E-10 71.0 6.1 56 294-349 8-64 (133)
112 3lhh_A CBS domain protein; str 98.1 1.3E-05 4.5E-10 71.1 9.9 118 294-416 42-170 (172)
113 1pvm_A Conserved hypothetical 98.1 1.4E-05 4.7E-10 71.7 9.6 88 294-383 9-100 (184)
114 3i8n_A Uncharacterized protein 98.0 8.5E-06 2.9E-10 68.6 7.2 88 294-384 6-97 (130)
115 1me8_A Inosine-5'-monophosphat 98.0 1.5E-06 5.3E-11 90.8 3.0 99 224-329 159-260 (503)
116 3oi8_A Uncharacterized protein 98.0 4.8E-06 1.6E-10 72.7 5.7 87 294-384 38-128 (156)
117 2nyc_A Nuclear protein SNF4; b 98.0 1.1E-05 3.6E-10 68.7 7.5 58 294-351 8-69 (144)
118 2pfi_A Chloride channel protei 98.0 1.1E-05 3.7E-10 70.3 7.6 58 294-351 13-73 (164)
119 3oco_A Hemolysin-like protein 98.0 6.1E-06 2.1E-10 71.6 5.9 118 294-416 20-149 (153)
120 1yav_A Hypothetical protein BS 98.0 9.6E-06 3.3E-10 70.7 6.7 92 294-385 14-113 (159)
121 2rc3_A CBS domain; in SITU pro 98.0 1.3E-05 4.4E-10 67.7 7.3 56 295-351 7-66 (135)
122 2uv4_A 5'-AMP-activated protei 98.0 1.4E-05 4.6E-10 69.2 7.4 58 294-352 23-80 (152)
123 4gqw_A CBS domain-containing p 97.9 1.2E-05 4.1E-10 68.9 6.5 55 294-348 5-62 (152)
124 1o50_A CBS domain-containing p 97.9 7.3E-06 2.5E-10 71.4 5.0 61 223-287 93-153 (157)
125 2j9l_A Chloride channel protei 97.9 3E-05 1E-09 68.9 8.9 58 294-351 11-77 (185)
126 3sl7_A CBS domain-containing p 97.9 1.5E-05 5.2E-10 70.5 5.8 54 294-347 4-60 (180)
127 3kxr_A Magnesium transporter, 97.8 2.1E-05 7.1E-10 72.2 6.5 62 224-288 114-175 (205)
128 2d4z_A Chloride channel protei 97.8 2.9E-05 9.9E-10 73.7 7.5 60 294-353 13-75 (250)
129 3pc3_A CG1753, isoform A; CBS, 97.8 5.3E-05 1.8E-09 79.6 9.8 90 293-384 383-477 (527)
130 3usb_A Inosine-5'-monophosphat 97.8 4.8E-05 1.6E-09 79.6 9.2 135 189-334 128-279 (511)
131 2yvy_A MGTE, Mg2+ transporter 97.5 8.3E-05 2.8E-09 71.4 5.2 61 224-287 197-257 (278)
132 2oux_A Magnesium transporter; 97.4 0.0001 3.4E-09 71.2 5.2 61 224-287 199-259 (286)
133 4avf_A Inosine-5'-monophosphat 97.4 9.1E-05 3.1E-09 77.0 4.5 62 224-286 145-206 (490)
134 1vrd_A Inosine-5'-monophosphat 97.2 0.00018 6.2E-09 74.8 4.7 63 224-287 153-215 (494)
135 2zy9_A Mg2+ transporter MGTE; 97.2 0.00025 8.7E-09 73.4 5.8 61 224-287 217-277 (473)
136 3org_A CMCLC; transporter, tra 97.2 0.00022 7.5E-09 76.5 4.3 56 227-286 569-624 (632)
137 4fxs_A Inosine-5'-monophosphat 97.1 0.00015 5.1E-09 75.6 2.4 92 189-285 104-207 (496)
138 2cu0_A Inosine-5'-monophosphat 97.0 0.00031 1.1E-08 72.9 3.3 107 224-341 148-258 (486)
139 1zfj_A Inosine monophosphate d 96.9 0.0039 1.3E-07 64.6 10.8 62 224-287 150-211 (491)
140 1jcn_A Inosine monophosphate d 96.5 0.00049 1.7E-08 71.9 0.7 62 224-286 171-232 (514)
141 4af0_A Inosine-5'-monophosphat 96.5 0.00084 2.9E-08 69.4 2.2 58 225-285 199-256 (556)
142 2jaf_A Halorhodopsin, HR; chro 41.8 1.8E+02 0.0061 27.1 10.6 39 130-170 178-216 (274)
143 2pp6_A Gifsy-2 prophage ATP-bi 40.6 31 0.0011 27.2 4.2 25 408-432 59-83 (102)
144 3k2t_A LMO2511 protein; lister 37.7 56 0.0019 22.9 4.8 30 243-272 11-40 (57)
145 3ug9_A Archaeal-type opsin 1, 33.0 3.4E+02 0.011 26.1 11.5 23 149-171 227-249 (333)
146 1tif_A IF3-N, translation init 32.9 55 0.0019 24.6 4.3 26 324-349 13-38 (78)
147 3ka5_A Ribosome-associated pro 31.7 84 0.0029 22.7 5.0 35 243-278 11-45 (65)
148 2jpp_A Translational repressor 30.4 55 0.0019 24.0 3.8 24 414-437 7-31 (70)
149 3lyv_A Ribosome-associated fac 29.6 1.1E+02 0.0038 22.1 5.4 35 243-278 12-46 (66)
150 2bti_A Carbon storage regulato 28.6 63 0.0021 23.2 3.8 24 414-437 9-33 (63)
151 1vpz_A Carbon storage regulato 27.3 66 0.0023 23.8 3.8 24 414-437 19-43 (73)
152 2l6x_A GPR, green-light absorb 24.8 3.9E+02 0.013 24.2 10.1 18 154-171 173-190 (243)
153 2ava_A ACP I, acyl carrier pro 23.1 25 0.00085 25.8 0.9 28 378-407 46-73 (82)
154 2amw_A Hypothetical protein NE 22.3 58 0.002 23.9 2.9 26 378-405 47-74 (83)
155 3qbg_A Halorhodopsin; membrane 20.3 5.3E+02 0.018 24.1 11.5 20 152-171 213-232 (291)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.96 E-value=5.2e-29 Score=225.13 Aligned_cols=164 Identities=27% Similarity=0.633 Sum_probs=116.9
Q ss_pred CCCCHHHHHHHHHhchhcCccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCC
Q psy2372 189 DLITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKS 268 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~ 268 (447)
..+|++||+.+++.+.+.|.++++|++++++++++.+.+|+++|+|+.+++++++++++.++++.|.+++++++||++++
T Consensus 5 ~~~t~~el~~l~~~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~ 84 (172)
T 3lhh_A 5 DNVTQEDIQAMLQEGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNN 84 (172)
T ss_dssp --------------------------------------CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSS
T ss_pred ccCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHH
Q psy2372 269 ISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHS 348 (447)
Q Consensus 269 ~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~ 348 (447)
.++++|+|+.+|+++...++.. .+++++|++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|++++
T Consensus 85 ~~~lvGivt~~dl~~~~~~~~~---~~v~~im~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dil~~ 161 (172)
T 3lhh_A 85 VDDMVGIISAKQLLSESIAGER---LELVDLVKNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDMMDA 161 (172)
T ss_dssp TTSEEEEEEHHHHHHHHHTTCC---CCGGGGCBCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CCeEEEEEEHHHHHHHHhhcCc---ccHHHHhcCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHHHHH
Confidence 4899999999999998765443 7899999889999999999999999999999999999999999999999999999
Q ss_pred Hhccc-cc
Q psy2372 349 LIGDI-SN 355 (447)
Q Consensus 349 i~gei-~e 355 (447)
++|++ ||
T Consensus 162 l~~~~~de 169 (172)
T 3lhh_A 162 LTGEFFQE 169 (172)
T ss_dssp HHTTCC--
T ss_pred HhCCCccc
Confidence 99998 65
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=5e-28 Score=215.06 Aligned_cols=155 Identities=26% Similarity=0.525 Sum_probs=144.8
Q ss_pred CCCHHHHHHHHHhchhcCccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCC
Q psy2372 190 LITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSI 269 (447)
Q Consensus 190 ~~s~~el~~lv~~~~~~g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~ 269 (447)
.+|++||+.+++.+.++|.++++|++++++++++.+.+|+++|+|+.+++++++++++.++++.|.+++++++||++++.
T Consensus 2 ~~t~~el~~li~~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~ 81 (156)
T 3oi8_A 2 NASAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDK 81 (156)
T ss_dssp CCCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSST
T ss_pred CCCHHHHHHHHHhHHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCC
Confidence 47999999999999999999999999999999999999999999988899999999999999999999999999998654
Q ss_pred CeEEEEEEhhhHHHHhHhCCCccCCChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHH
Q psy2372 270 SKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIH 347 (447)
Q Consensus 270 ~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle 347 (447)
++++|+++.+|+++...++. +.+++++|+++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+++
T Consensus 82 ~~lvGivt~~dl~~~~~~~~---~~~v~~im~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dile 156 (156)
T 3oi8_A 82 DEVLGILHAKDLLKYMFNPE---QFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIE 156 (156)
T ss_dssp TCEEEEEEGGGGGGGSSCGG---GCCHHHHCBCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHCC
T ss_pred CcEEEEEEHHHHHHHHHcCC---cccHHHHcCCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhcC
Confidence 69999999999998765432 2789999999999999999999999999999999999999999999999999864
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.95 E-value=2.5e-27 Score=214.82 Aligned_cols=161 Identities=26% Similarity=0.503 Sum_probs=137.0
Q ss_pred HHHhchhcCccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEh
Q psy2372 199 LFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNT 278 (447)
Q Consensus 199 lv~~~~~~g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~ 278 (447)
+...+.++|.++++|++++++++++.+.+|+++|+|+++++++++++++.++++.|.+++++++||++++.++++|+|+.
T Consensus 9 ~~~~~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~ 88 (173)
T 3ocm_A 9 LPSAMPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRA 88 (173)
T ss_dssp ---------CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEH
T ss_pred HHHhHHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEH
Confidence 44567778999999999999999999999999999999999999999999999999999999999998655799999999
Q ss_pred hhHHHHhHhCCCccCCChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-cccc
Q psy2372 279 KTLFKKIISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-SNSY 357 (447)
Q Consensus 279 ~DLl~~~~~~~~~~~~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~e~~ 357 (447)
+|++++..++.. .+++ ++++++++++++++.++++.|.+++.+.+||+|++|+++|+||++|++++++|++ ||++
T Consensus 89 ~Dl~~~~~~~~~---~~v~-~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~~ 164 (173)
T 3ocm_A 89 KDLVADLITEGR---VRRN-RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDE 164 (173)
T ss_dssp HHHHHHHHHHSS---CCGG-GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTTS
T ss_pred HHHHHHHhcCCc---chhH-hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCccc
Confidence 999988755433 6788 8899999999999999999999999999999999999999999999999999999 7754
Q ss_pred ccceEE
Q psy2372 358 QEEIEF 363 (447)
Q Consensus 358 ~~~~~~ 363 (447)
++.+.+
T Consensus 165 ~~~~~~ 170 (173)
T 3ocm_A 165 LPDIVA 170 (173)
T ss_dssp CC----
T ss_pred cHhhHh
Confidence 344433
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.93 E-value=7.7e-26 Score=198.61 Aligned_cols=146 Identities=26% Similarity=0.545 Sum_probs=121.7
Q ss_pred hcCccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHH
Q psy2372 205 DIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKK 284 (447)
Q Consensus 205 ~~g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~ 284 (447)
++|.++++|++++++++++.+.+|+++|+|+.+++++++++++.++++.|.+++++++||+|++.++++|+++.+|+++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~ 81 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQ 81 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHH
Confidence 56899999999999999999999999999988999999999999999999999999999998644799999999999998
Q ss_pred hHhCCCccCCChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 285 IISNRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 285 ~~~~~~~~~~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
..++.. .+++++|+++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|++++++|++
T Consensus 82 ~~~~~~---~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~i 147 (148)
T 3lv9_A 82 KINENK---IELEEILRDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI 147 (148)
T ss_dssp HHHHSC---CCGGGTCBCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHTC
T ss_pred HhcCCC---ccHHHhcCCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCcC
Confidence 765433 789999988999999999999999999999999999999999999999999999999975
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.91 E-value=4.1e-25 Score=195.31 Aligned_cols=145 Identities=25% Similarity=0.500 Sum_probs=126.7
Q ss_pred cchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEE-eCCCCeEEEEEEhhhHHHHhHh
Q psy2372 209 FNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVY-KKSISKIIGTLNTKTLFKKIIS 287 (447)
Q Consensus 209 l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~-~~~~~~ivGiv~~~DLl~~~~~ 287 (447)
++++|++++++++++.+.+|+++|+|+.+++++++++++.++++.|.+++++++||+ +++.++++|+|+.+|+++....
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~ 82 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARI 82 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhc
Confidence 567899999999999999999999998889999999999999999999999999999 5444799999999999988765
Q ss_pred CCCccCCChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-ccc
Q psy2372 288 NRSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-SNS 356 (447)
Q Consensus 288 ~~~~~~~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~e~ 356 (447)
+.. .+++++|++++++++++++.++++.|.+++.+.+||+|++|+++|+||+.|++++++|++ +|+
T Consensus 83 ~~~---~~v~~~m~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de~ 149 (153)
T 3oco_A 83 DDK---AKISTIMRDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDEQ 149 (153)
T ss_dssp HTT---SBGGGTCBCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC------
T ss_pred CCC---CcHHHHhCCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCcc
Confidence 443 789999988999999999999999999999999999999999999999999999999999 664
No 6
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.1e-23 Score=181.30 Aligned_cols=129 Identities=24% Similarity=0.496 Sum_probs=115.7
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCCCe
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPL 304 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~~~ 304 (447)
+.+|+++|+|+.+++++++++++.++++.|.+++++++||++++.++++|+++.+|++++..++......+++++|++++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 80 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAADEIY 80 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHSBCCC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhccCCe
Confidence 35799999999899999999999999999999999999999765589999999999999876544222246899999999
Q ss_pred eeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 305 ~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
++++++++.++++.|.+++.+.+||+|++|+++|+||.+|++++++|++
T Consensus 81 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~i 129 (130)
T 3hf7_A 81 FVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGDF 129 (130)
T ss_dssp EEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC--
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999999975
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.89 E-value=4.3e-23 Score=177.03 Aligned_cols=127 Identities=31% Similarity=0.661 Sum_probs=115.4
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCC
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQP 302 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~ 302 (447)
..+.+|+++|+|+++++++++++++.++++.|.+++++++||++++.++++|+++.+|+++...+ .. .+++++|++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~-~~---~~v~~~m~~ 77 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLE-PA---LDIRSLVRP 77 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTC-TT---SCGGGGCBC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhcc-CC---cCHHHHhCC
Confidence 35789999999999999999999999999999999999999998645899999999999987653 22 679999999
Q ss_pred CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 303 PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 303 ~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
+.++++++++.++++.|.+++.+.+||+|++|+++|+||++|++++++|++
T Consensus 78 ~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei 128 (129)
T 3jtf_A 78 AVFIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDI 128 (129)
T ss_dssp CCEEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999986
No 8
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.89 E-value=2e-23 Score=180.87 Aligned_cols=131 Identities=28% Similarity=0.527 Sum_probs=112.9
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCCCe
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPL 304 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~~~ 304 (447)
+.+|+++|+|+++++++++++++.++++.|.+++++++||++++.++++|+++.+|+++...++. ....+++++|++++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~-~~~~~v~~~m~~~~ 80 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKAD-GDSDDVKKLLRPAT 80 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSS-GGGCCGGGTCBCCC
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhcc-CCCcCHHHHcCCCe
Confidence 57899999999899999999999999999999999999999865479999999999998875322 12368999999999
Q ss_pred eeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-ccc
Q psy2372 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-SNS 356 (447)
Q Consensus 305 ~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~e~ 356 (447)
++++++++.++++.|++++.+.+||+|++|+++|+||++|++++++|++ ||+
T Consensus 81 ~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de~ 133 (136)
T 3lfr_A 81 FVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEH 133 (136)
T ss_dssp EEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC--------
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCcc
Confidence 9999999999999999999999999999999999999999999999999 664
No 9
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.89 E-value=4.7e-23 Score=176.86 Aligned_cols=129 Identities=26% Similarity=0.421 Sum_probs=115.3
Q ss_pred ccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC
Q psy2372 222 KLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ 301 (447)
Q Consensus 222 ~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~ 301 (447)
++++.+|+++|+|+.+++++++++++.++++.|.+++++++||++++.++++|+++.+|+++...++.. ..+++++|+
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~--~~~v~~~m~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSG--QKQLGAVMR 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTT--TSBHHHHSE
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCC--cCCHHHHhc
Confidence 467889999999998999999999999999999999999999998655899999999999998765432 278999999
Q ss_pred CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 302 PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 302 ~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|++++++|+
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ge 130 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVGE 130 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHTC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcCC
Confidence 899999999999999999999999999999999999999999999999985
No 10
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.88 E-value=1.5e-22 Score=172.97 Aligned_cols=126 Identities=25% Similarity=0.519 Sum_probs=112.5
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCCCe
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPL 304 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~~~ 304 (447)
+.+|+++|+|+.+++++++++++.++++.|.+++++++||++++.++++|+++.+|+++...++.. +.+++++|+++.
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~--~~~v~~~m~~~~ 79 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAE--AFSMDKVLRTAV 79 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCC--CCCHHHHCBCCC
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCC--CCCHHHHcCCCe
Confidence 578999999988889999999999999999999999999998654799999999999987654332 278999999999
Q ss_pred eeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 305 ~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
++++++++.++++.|.+++.+.+||+|++|+++|+||++|++++++||
T Consensus 80 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ge 127 (127)
T 3nqr_A 80 VVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 127 (127)
T ss_dssp EEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC---
T ss_pred EECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999999885
No 11
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.86 E-value=8.5e-22 Score=175.27 Aligned_cols=126 Identities=16% Similarity=0.287 Sum_probs=110.0
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCC----ccCCChhhhc
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRS----IVNIDITSAI 300 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~----~~~~~v~~im 300 (447)
..+++++|+|+.+++++++++|+++|++.|.+++++++||+|++ ++++|+++.+|++++...... ..+.++.++|
T Consensus 14 ~~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im 92 (156)
T 3k6e_A 14 LGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMT 92 (156)
T ss_dssp HTTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTC
T ss_pred hccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccccccccCHHHhh
Confidence 45789999999999999999999999999999999999999854 899999999999987654221 1236789999
Q ss_pred -CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 301 -QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 301 -~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
+++.++++++++.++++.|.+++ ++||+|++|+++|+||++|+++++.+.+
T Consensus 93 ~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~ 144 (156)
T 3k6e_A 93 KTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp BCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHS
T ss_pred cCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHh
Confidence 57789999999999999998764 5999999999999999999999997655
No 12
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.84 E-value=1.8e-20 Score=174.27 Aligned_cols=139 Identities=11% Similarity=0.095 Sum_probs=125.6
Q ss_pred ccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhC---CCcEEEEEeCCCCeEEEEEEhhhHHHH
Q psy2372 208 IFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDS---SYNYFPVYKKSISKIIGTLNTKTLFKK 284 (447)
Q Consensus 208 ~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~---~~s~iPV~~~~~~~ivGiv~~~DLl~~ 284 (447)
.++++|++++++++++.+.+|+++|+| +++++++++|+.++++.|+++ +++.+||+|++ ++++|+|+.+|++..
T Consensus 36 ~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~~ 112 (205)
T 3kxr_A 36 QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA-DKYLGTVRRYDIFKH 112 (205)
T ss_dssp HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT-CBEEEEEEHHHHTTS
T ss_pred cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC-CeEEEEEEHHHHHhC
Confidence 478899999999999999999999996 778999999999999999987 78999999854 899999999999864
Q ss_pred hHhCCCccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccccc
Q psy2372 285 IISNRSIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISN 355 (447)
Q Consensus 285 ~~~~~~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei~e 355 (447)
. .. .+++++| ++++++++++++.++++.|++++.+.+||+|++|+++|+||.+|+++.+.++.+|
T Consensus 113 ~---~~---~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil~~i~~e~~e 178 (205)
T 3kxr_A 113 E---PH---EPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAATALVREHYEA 178 (205)
T ss_dssp C---TT---SBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHHHHHHHHHC-
T ss_pred C---Cc---chHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHHHHHHHHHHH
Confidence 2 22 6799999 5788999999999999999999999999999999999999999999999876533
No 13
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.84 E-value=1.7e-21 Score=203.03 Aligned_cols=205 Identities=11% Similarity=0.149 Sum_probs=168.2
Q ss_pred CCCCHHHHHHHHHhchhc---------CccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhC--
Q psy2372 189 DLITEEEIYKLFREGFDI---------GIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDS-- 257 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~---------g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~-- 257 (447)
..++++|+..++++..++ +.++++|++.+++++++.+.+++++|+| +++++++++|++++++.++++
T Consensus 109 ~~l~~dd~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~ 186 (473)
T 2zy9_A 109 EELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAP 186 (473)
T ss_dssp HHSCHHHHHHHHHHHHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGG
T ss_pred HhCCHHHHHHHHHhCCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccC
Confidence 357899999999988887 8999999999999999999999999995 789999999999999999986
Q ss_pred ---CCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCC
Q psy2372 258 ---SYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEY 333 (447)
Q Consensus 258 ---~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~ 333 (447)
+++++||+|++ ++++|+++.+|++... .. .+++++| +++.++++++++.++++.|++++.+.+||+|++
T Consensus 187 ~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~---~~---~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~ 259 (473)
T 2zy9_A 187 DAETIYYIYVVDEK-GRLKGVLSLRDLIVAD---PR---TRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEE 259 (473)
T ss_dssp GCSEEEEEEEECTT-SBEEEEEEHHHHHHSC---TT---SBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTT
T ss_pred CcCceeEEEEECCC-CcEEEEEEHHHHhcCC---CC---CcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC
Confidence 47999999865 8999999999998742 22 6899999 678999999999999999999999999999999
Q ss_pred CCEEEEEeHHHHHHHHhcccccc--cccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcC
Q psy2372 334 GELEGIITINDIIHSLIGDISNS--YQEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLG 410 (447)
Q Consensus 334 G~~iGiVT~~DIle~i~gei~e~--~~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg 410 (447)
|+++|+||.+|+++.+.++.+++ ....+. .+++.|..++. .+.+++.+++- +. ..-+.+++|+++.+++
T Consensus 260 g~lvGiIT~~Dil~~i~~e~~ed~~~~~~i~-~~~~~~~~~~v--~~~~~~R~~wl--~~---~~~~~~l~~~vi~~fe 330 (473)
T 2zy9_A 260 GRLVGIVTVDDVLDVLEAEATEDIHKLGAVD-VPDLVYSEAGP--VALWLARVRWL--VI---LILTGMVTSSILQGFE 330 (473)
T ss_dssp SBEEEEEEHHHHHHHHHHHHHHHHHHHTTCC-CTTCCSSSCCH--HHHHHHHHHHH--HH---HHHHHHHHHHHHHHTH
T ss_pred CEEEEEEehHhhHHHHHHHhhhhhhhccccc-cCcchhhhhHH--HHHHHHHhHHH--HH---HHHHHHHHHHHHHHHH
Confidence 99999999999999998876332 111111 23334544433 55667777664 32 1246899999988765
No 14
>2pli_A Uncharacterized protein; CORC-associated region, MCSG, PSI2, structural genomics, Pro structure initiative; 1.70A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=99.84 E-value=1.8e-20 Score=151.41 Aligned_cols=83 Identities=19% Similarity=0.441 Sum_probs=77.2
Q ss_pred cccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCee
Q psy2372 357 YQEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKI 436 (447)
Q Consensus 357 ~~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri 436 (447)
+.+.+.+.++|+|+++|+++++|+++.||++ +|+ ++|+|||||+++++|++|++|+++.++||+|+|.+++++||
T Consensus 8 ~~~~i~~~~dg~~~v~G~~~l~dl~~~l~~~--l~~---~~~dTlgG~i~~~lg~iP~~Ge~v~~~~~~f~V~~~d~~rI 82 (91)
T 2pli_A 8 SADNIHAVSSERWRIHAATEIEDINTFFGTE--YSS---EEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRL 82 (91)
T ss_dssp CCCSEEEEETTEEEEETTCBHHHHHHHHCCC--CCC---SSCCBHHHHHHHHHSSCCCTTCEEEETTEEEEEEEECSSCE
T ss_pred cCcceEEeCCCEEEEEcCCCHHHHHHHhCCC--CCC---CCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEEeCCEE
Confidence 3456888899999999999999999999999 883 37999999999999999999999999999999999999999
Q ss_pred eEEEEEec
Q psy2372 437 ERLLVTIL 444 (447)
Q Consensus 437 ~~v~v~~~ 444 (447)
.+|++++.
T Consensus 83 ~~v~v~~~ 90 (91)
T 2pli_A 83 HTLMATRV 90 (91)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999865
No 15
>3ded_A Probable hemolysin; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG, membrane; HET: MSE; 2.14A {Chromobacterium violaceum} SCOP: d.145.1.4
Probab=99.84 E-value=1.7e-20 Score=157.43 Aligned_cols=93 Identities=31% Similarity=0.676 Sum_probs=76.7
Q ss_pred ccc-ccc--cccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEE
Q psy2372 351 GDI-SNS--YQEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIE 427 (447)
Q Consensus 351 gei-~e~--~~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~ 427 (447)
.+| ||+ +++.+.+.++|+|+++|+++++|+++.||++.++|.+++++|+|||||+++++|++|++|+++.++||+|+
T Consensus 16 ~~I~DE~D~ee~~i~~~~dg~~~v~G~~~l~dl~e~lg~~~~l~~~~~~~~dTlgGlil~~lg~iP~~Gd~v~~~g~~f~ 95 (113)
T 3ded_A 16 NLYFQGHDGEEDEIVQREDGSWLVDGMVSLDRFREFFELEAPLPGEAGGNIHTLAGVMLYQLGRVPSVTDRFEWNGFSFE 95 (113)
T ss_dssp -----------CCEEECTTSCEEEETTCBHHHHHHHTTCCSCCTTGGGTCCCBHHHHHHHHHCSSCCTTCEEEETTEEEE
T ss_pred CcCcCCCCCCCCceEEecCCEEEEecccCHHHHHHHhCCCccCCcccCCCCccHHHHHHHHhCCCCCCCCEEEECCEEEE
Confidence 357 774 56678899999999999999999999999852255321357999999999999999999999999999999
Q ss_pred EEEeecCeeeEEEEEe
Q psy2372 428 VIDMNNNKIERLLVTI 443 (447)
Q Consensus 428 v~~~~~~ri~~v~v~~ 443 (447)
|.+++++||.+|+|++
T Consensus 96 V~~~d~~RI~~V~v~~ 111 (113)
T 3ded_A 96 VVDMDRTRVDKILVQR 111 (113)
T ss_dssp EEEEETTEEEEEEEEE
T ss_pred EEEEeCCeEEEEEEEE
Confidence 9999999999999987
No 16
>3llb_A Uncharacterized protein; protein PA3983, unknown function, structural genomics, PSI2, MCSG, protein structure initiative; 1.80A {Pseudomonas aeruginosa} SCOP: d.145.1.0
Probab=99.84 E-value=1.8e-20 Score=148.78 Aligned_cols=81 Identities=23% Similarity=0.495 Sum_probs=75.7
Q ss_pred ceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCeeeEE
Q psy2372 360 EIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERL 439 (447)
Q Consensus 360 ~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri~~v 439 (447)
.+.+.++|+|+++|+++++|+++.||++ +|+ ++|+|+|||+++++|++|++||+++++||+|+|.+++++||.+|
T Consensus 2 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~--l~~---~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~~~~rI~~v 76 (83)
T 3llb_A 2 YIKPLPSGDFIVKALTPVDAFNDFFGSE--FSD---EEFDTVGGLVMSAFGHLPKRNEVVELGEFRFRVLNADSRRVHLL 76 (83)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHCCC--CCT---TTCSBHHHHHHHHHSSCCCTTCEEEETTEEEEEEEECSSCEEEE
T ss_pred ceEEeCCCEEEEEccCCHHHHHHHhCCC--CCC---CCCcCHHHHHHHHhCcCCCCCCEEEECCEEEEEEEeeCCEEEEE
Confidence 4678899999999999999999999999 873 47999999999999999999999999999999999999999999
Q ss_pred EEEecC
Q psy2372 440 LVTILN 445 (447)
Q Consensus 440 ~v~~~~ 445 (447)
++++.+
T Consensus 77 ~v~~~~ 82 (83)
T 3llb_A 77 RLSPLQ 82 (83)
T ss_dssp EEEEC-
T ss_pred EEEECC
Confidence 998865
No 17
>3lae_A UPF0053 protein HI0107; APC85784.2, conserved protein, haemophilus influenzae RD KW20, structural genomics, PSI-2; HET: MSE; 1.45A {Haemophilus influenzae} SCOP: d.145.1.4 PDB: 2o1r_A*
Probab=99.84 E-value=2.2e-20 Score=147.66 Aligned_cols=80 Identities=20% Similarity=0.338 Sum_probs=75.4
Q ss_pred ceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCeeeEE
Q psy2372 360 EIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERL 439 (447)
Q Consensus 360 ~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri~~v 439 (447)
.+.+.++|+|+++|+++++|+++.||++ +|+ ++|+|+|||+++++|++|++||+++++||+|+|.+++++||.+|
T Consensus 2 ~i~~~~dg~~~v~g~~~l~dl~~~l~~~--l~~---~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~~~~rI~~v 76 (81)
T 3lae_A 2 NAIQQSDGSMIIDGSANLRDLNKMFNWE--LDT---EDARTFNGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQA 76 (81)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHCCC--CCC---SSCSBHHHHHHHHCSSCCCTTCEEEETTEEEEEEEEETTEEEEE
T ss_pred CcEEeCCCEEEEEeeCCHHHHHHHhCCC--CCC---CCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEeeCCEEEEE
Confidence 4678899999999999999999999999 873 47999999999999999999999999999999999999999999
Q ss_pred EEEec
Q psy2372 440 LVTIL 444 (447)
Q Consensus 440 ~v~~~ 444 (447)
+++++
T Consensus 77 ~v~~~ 81 (81)
T 3lae_A 77 KVVKL 81 (81)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99874
No 18
>2oai_A Hemolysin; PFAM03471, xylella fastidiosa temecula1, structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; HET: MLY; 1.80A {Xylella fastidiosa} SCOP: d.145.1.4 PDB: 2r8d_A*
Probab=99.83 E-value=2.3e-20 Score=151.69 Aligned_cols=86 Identities=33% Similarity=0.702 Sum_probs=74.3
Q ss_pred cccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCee
Q psy2372 357 YQEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKI 436 (447)
Q Consensus 357 ~~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri 436 (447)
+++.+.+.++|+|+++|+++++|+++.||++ +|++++++|+|||||+++++|++|++|+++.++||+|+|.+++++||
T Consensus 8 e~~~i~~~~dg~~~v~G~~~l~dl~~~l~~~--l~~~~~~~~dTlgG~i~~~lg~iP~~Gd~v~~~~~~f~V~~~d~~rI 85 (94)
T 2oai_A 8 EDALMVTREDGSFLIDGTLPIEELREVLGAE--LPDGEENNYHTLAGMCISYFGRIPHVGEYFDWAGWRIEIVDLDGARI 85 (94)
T ss_dssp CCCSEEECTTSCEEEETTCBHHHHHHHHTC---------CCCSBHHHHHHHHHSSCCCTTCEEEETTEEEEEEEEETTEE
T ss_pred ccCCeEEeCCCeEEEeccCCHHHHHHHhCCC--CCcccCCCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEEcCCEE
Confidence 3456888899999999999999999999999 88411157999999999999999999999999999999999999999
Q ss_pred eEEEEEec
Q psy2372 437 ERLLVTIL 444 (447)
Q Consensus 437 ~~v~v~~~ 444 (447)
.+|++++.
T Consensus 86 ~~V~v~~~ 93 (94)
T 2oai_A 86 DXLLLQRL 93 (94)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999875
No 19
>2p13_A CBS domain; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; 1.65A {Nitrosomonas europaea} SCOP: d.145.1.4
Probab=99.83 E-value=2.1e-20 Score=150.85 Aligned_cols=84 Identities=21% Similarity=0.447 Sum_probs=77.2
Q ss_pred ccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCeee
Q psy2372 358 QEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIE 437 (447)
Q Consensus 358 ~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri~ 437 (447)
.+.+.+.++|+|+++|+++++|+++.||++ +|++ +++|+|||||+++++|++|++|+++.++||+|+|.+++++||.
T Consensus 6 ~~~i~~~~dg~~~v~G~~~l~dl~~~l~~~--l~~~-~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~f~V~~~d~~rI~ 82 (90)
T 2p13_A 6 KVVAEQQADGTWLMDGWISIRKASNLLEHD--LVDE-AERYSTLGGYLLWQFGYIPAAGEQITVDGLIFEIVSVNKHNIG 82 (90)
T ss_dssp CCSEEECTTSCEEEETTSBHHHHHHHHTSC--CCCT-TCCCCBHHHHHHHHHSSCCCTTCEEEETTEEEEECCBCSSSBC
T ss_pred cCceEEeCCCEEEEECcCCHHHHHHHHCCC--CCCc-CCCCccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEEeCCEEE
Confidence 346788899999999999999999999999 8841 1579999999999999999999999999999999999999999
Q ss_pred EEEEEec
Q psy2372 438 RLLVTIL 444 (447)
Q Consensus 438 ~v~v~~~ 444 (447)
+|++++.
T Consensus 83 ~v~v~~~ 89 (90)
T 2p13_A 83 KVRVHRT 89 (90)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999875
No 20
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.82 E-value=5.3e-20 Score=178.86 Aligned_cols=156 Identities=14% Similarity=0.222 Sum_probs=137.1
Q ss_pred CCCHHHHHHHHHhchhc---------CccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhC---
Q psy2372 190 LITEEEIYKLFREGFDI---------GIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDS--- 257 (447)
Q Consensus 190 ~~s~~el~~lv~~~~~~---------g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~--- 257 (447)
.++.++...+++...++ |.++..++..+.+++++.+.+|+++|+| +++++++++++.++++.|+++
T Consensus 90 ~l~~d~~~~ll~~l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~ 167 (278)
T 2yvy_A 90 ELSLDDLADALQAVRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPD 167 (278)
T ss_dssp HSCHHHHHHHHHHHHHHCHHHHHHHHHHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTT
T ss_pred cCCHHHHHHHHHhCCCccHHHHHHHHHcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCC
Confidence 46788888888877766 7899999999999999999999999995 778999999999999999987
Q ss_pred --CCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCC
Q psy2372 258 --SYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYG 334 (447)
Q Consensus 258 --~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G 334 (447)
+++++||+|++ ++++|+|+.+|++... .. .+++++| +++++|++++++.++++.|++++.+.+||+|++|
T Consensus 168 ~~~~~~~~Vvd~~-~~lvGivt~~dll~~~---~~---~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g 240 (278)
T 2yvy_A 168 AETIYYIYVVDEK-GRLKGVLSLRDLIVAD---PR---TRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEG 240 (278)
T ss_dssp CSCSSEEEEECTT-CBEEEEEEHHHHHHSC---TT---CBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTS
T ss_pred ccceeEEEEECCC-CCEEEEEEHHHHhcCC---CC---CcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCC
Confidence 78999999865 8999999999998642 22 6799999 6788999999999999999999999999999999
Q ss_pred CEEEEEeHHHHHHHHhcccc
Q psy2372 335 ELEGIITINDIIHSLIGDIS 354 (447)
Q Consensus 335 ~~iGiVT~~DIle~i~gei~ 354 (447)
+++|+||.+|+++.+.++..
T Consensus 241 ~lvGivT~~Dil~~i~~e~~ 260 (278)
T 2yvy_A 241 RLVGIVTVDDVLDVLEAEAT 260 (278)
T ss_dssp BEEEEEEHHHHHHHC-----
T ss_pred eEEEEEEHHHHHHHHHHHhH
Confidence 99999999999999988763
No 21
>2r2z_A Hemolysin; APC85144, enterococcus faecalis V583, STRU initiative, midwest center for structural genomics, MCSG; 1.20A {Enterococcus faecalis} SCOP: d.145.1.4
Probab=99.82 E-value=4.6e-20 Score=149.75 Aligned_cols=83 Identities=24% Similarity=0.466 Sum_probs=76.4
Q ss_pred ccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEE--cCEEEEEEEeecCe
Q psy2372 358 QEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIW--KNIKIEVIDMNNNK 435 (447)
Q Consensus 358 ~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~--~~~~f~v~~~~~~r 435 (447)
.+.+.+.++|+|+++|+++++|+|+.||++ +|. ++|+|||||+++++|++|++|+++.+ +||+|+|.+++++|
T Consensus 7 ~~~i~~~~dg~~~v~G~~~l~dl~~~l~~~--l~~---~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~~~f~V~~~~~~r 81 (93)
T 2r2z_A 7 ENLYTQVADNEYLVQGRMLIDEFNEVFETD--LHM---SDVDTMAGYLITALGTIPDEGEKPSFEVGNIKLTAEEMEGTR 81 (93)
T ss_dssp -CCEEEEETTEEEEETTSBHHHHHHHHTCC--CCC---TTCCBHHHHHHHHHSSCCCTTCCCEEEETTEEEEEEEEETTE
T ss_pred ccCeEEeCCCEEEEECCCCHHHHHHHhCCC--CCC---CCcccHHHHHHHHhCCCCCCCCEEEEecCCEEEEEEEeeCCE
Confidence 345788899999999999999999999999 883 37999999999999999999999988 99999999999999
Q ss_pred eeEEEEEecC
Q psy2372 436 IERLLVTILN 445 (447)
Q Consensus 436 i~~v~v~~~~ 445 (447)
|.+|++++.+
T Consensus 82 I~~v~v~~~~ 91 (93)
T 2r2z_A 82 LLVLRVHFYD 91 (93)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEecC
Confidence 9999998754
No 22
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=99.82 E-value=7.3e-20 Score=146.36 Aligned_cols=82 Identities=28% Similarity=0.558 Sum_probs=75.0
Q ss_pred eEEecCCeEEEeccCCHHHHHHHhCC-CCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCeeeEE
Q psy2372 361 IEFCEDGSWIISASMTFDRFKELLSN-QVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERL 439 (447)
Q Consensus 361 ~~~~~~~~~~v~g~~~i~~~~~~l~~-~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri~~v 439 (447)
+.+.++|+|+++|+++++|+++.||+ + +|+ +++|+|+|||+++++|++|++||+++++||+|+|.+++++||.+|
T Consensus 3 i~~~~dg~~~v~G~~~l~dl~~~l~~~~--l~~--~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~~~~rI~~v 78 (86)
T 2p4p_A 3 AMRRNEDSWLIDGATPLEDVMRALNIHT--FPR--DENYETIGGFMMYMLRXIPXXTDFVLYDXYXFEIIDTENFRIDQL 78 (86)
T ss_dssp CCCCCCSEEEEETTSBHHHHHHHTTCCC--SCC--SCSSCBHHHHHHHHHCSCCCTTCEEEETTEEEEEEEEETTEEEEE
T ss_pred eEEeCCCEEEEEccCCHHHHHHHhCCCC--CCc--CCCCccHHHHHHHHhCCCCCCCcEEEEeeEEEEEEEccCCEEEEE
Confidence 44568999999999999999999999 6 763 347999999999999999999999999999999999999999999
Q ss_pred EEEecCC
Q psy2372 440 LVTILND 446 (447)
Q Consensus 440 ~v~~~~~ 446 (447)
++++.++
T Consensus 79 ~v~~~~~ 85 (86)
T 2p4p_A 79 MVSFRXD 85 (86)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9998764
No 23
>2o3g_A Putative protein; APC85631.1, neisseria meningitid structural genomics, PSI-2, protein structure initiative; 2.55A {Neisseria meningitidis} SCOP: d.145.1.4
Probab=99.80 E-value=1.7e-19 Score=146.09 Aligned_cols=84 Identities=21% Similarity=0.383 Sum_probs=69.0
Q ss_pred ccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCeee
Q psy2372 358 QEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIE 437 (447)
Q Consensus 358 ~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri~ 437 (447)
.+.+.+.++|+|+++|+++++|+++.||++ ++|. +++|+|||||+++++|++|++|+++.++||+|+|.+++++||.
T Consensus 8 ~~~i~~~~dg~~~v~G~~~l~dl~~~l~~~-~l~~--~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~~~~rI~ 84 (92)
T 2o3g_A 8 EPAVQGNPDESLTVEGALEYVELAPQLNLP-QQEE--DADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE 84 (92)
T ss_dssp ---------CCSEEETTCBHHHHTTTTTCC-CCCT--TCSCSBHHHHHHHHHTSCCCTTCEEEETTEEEEEEEEETTEEE
T ss_pred CcceEEcCCCEEEEEccCCHHHHHHHhCCC-CCCc--CCCcccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEeeCCEEE
Confidence 345777899999999999999999999984 1442 3479999999999999999999999999999999999999999
Q ss_pred EEEEEec
Q psy2372 438 RLLVTIL 444 (447)
Q Consensus 438 ~v~v~~~ 444 (447)
+|++++.
T Consensus 85 ~V~v~~~ 91 (92)
T 2o3g_A 85 RVKITKL 91 (92)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9999875
No 24
>2rk5_A Putative hemolysin; structural genomics, PSI-2, MCSG, protein structure initiative, midwest center for structural genomics, membrane; 1.50A {Streptococcus mutans UA159} SCOP: d.145.1.4
Probab=99.80 E-value=4.1e-19 Score=142.29 Aligned_cols=79 Identities=23% Similarity=0.440 Sum_probs=73.8
Q ss_pred eEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCc--EEEEcC----EEEEEEEeecC
Q psy2372 361 IEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISE--NFIWKN----IKIEVIDMNNN 434 (447)
Q Consensus 361 ~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~--~~~~~~----~~f~v~~~~~~ 434 (447)
+.+.++|+|+++|+++++|+++.||++ +|+ ++|+|+|||+++++|++|++|| ++.++| |+|+|.+++++
T Consensus 2 i~~~~dg~~~v~G~~~l~dl~~~l~~~--l~~---~~~dTl~G~v~~~lg~iP~~Gd~~~v~~~~~~~~~~f~V~~~~~~ 76 (87)
T 2rk5_A 2 SREIADNTYIVLGTMTLNDFNEYFETD--LES---DNVDTIAGFYLTGVGTIPSQEEKEHFEVESNGKHLELINDKVKDG 76 (87)
T ss_dssp EEEEETTEEEEETTSBHHHHHHHHTCC--CCC---TTCCBHHHHHHHHHCSCCCSSSCCEEEEEETTEEEEEEEEEEETT
T ss_pred eEEeCCCEEEEEccCCHHHHHHHhCCC--CCC---CCcccHHHHHHHHhCcCCCCCCcEEEEECCceEEEEEEEEEEeCC
Confidence 567899999999999999999999999 883 3799999999999999999999 999999 99999999999
Q ss_pred eeeEEEEEec
Q psy2372 435 KIERLLVTIL 444 (447)
Q Consensus 435 ri~~v~v~~~ 444 (447)
||.+|++++.
T Consensus 77 rI~~v~v~~~ 86 (87)
T 2rk5_A 77 RVTKLKILVS 86 (87)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEeC
Confidence 9999999753
No 25
>2pls_A CBS domain protein; APC86064.2, CORC/HLYC transporter associated domain, CBS DOM protein, structural genomics, PSI-2 structure initiative; 2.15A {Chlorobium tepidum tls} SCOP: d.145.1.4
Probab=99.79 E-value=5e-19 Score=141.48 Aligned_cols=84 Identities=32% Similarity=0.665 Sum_probs=74.4
Q ss_pred ceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCeeeEE
Q psy2372 360 EIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNKIERL 439 (447)
Q Consensus 360 ~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~ri~~v 439 (447)
.+.+.++|+|+++|+++++|+++.||++ ++|+++.++|+|+|||+++++|++|++||+++++||+|+|.+++++||.+|
T Consensus 2 ~i~~~~dg~~~v~G~~~l~dl~~~l~~~-~l~~~~~~~~~Tl~G~i~~~lg~iP~~Gd~v~~~~~~f~V~~~~~~rI~~v 80 (86)
T 2pls_A 2 NAVQREDGSWLLDGLIAVPELKDTLGLR-AVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDKV 80 (86)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTCS-CCTTTTSCSCCBHHHHHHHHHTSCCCTTCEEEETTEEEEEEEEETTEEEEE
T ss_pred ceEEeCCCeEEEEcccCHHHHHHHhCCC-cCCCccCCCcccHHHHHHHHhCCCCCCCCEEEECCEEEEEEEeeCCEEEEE
Confidence 4667899999999999999999999984 155311157999999999999999999999999999999999999999999
Q ss_pred EEEec
Q psy2372 440 LVTIL 444 (447)
Q Consensus 440 ~v~~~ 444 (447)
++++.
T Consensus 81 ~v~~~ 85 (86)
T 2pls_A 81 LATKI 85 (86)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99875
No 26
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.79 E-value=2.8e-19 Score=160.62 Aligned_cols=134 Identities=16% Similarity=0.256 Sum_probs=112.8
Q ss_pred HHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC---
Q psy2372 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR--- 289 (447)
Q Consensus 213 E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~--- 289 (447)
+++.+.+. +++.+|+|+|+ ++++++++++|+.+|++.|.+++++.+||+|++ |+++|+++.+|+++......
T Consensus 7 ~~~~~~~~--l~~~~V~diM~--~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~~~ 81 (170)
T 4esy_A 7 RRRAIARA--IRQVPIRDILT--SPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWIYE 81 (170)
T ss_dssp HHHHHHHH--HHTSBGGGGCC--SCCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTHHH
T ss_pred HHHHHHHH--HcCCCHHHhcC--CCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccccc
Confidence 34445443 45789999998 478899999999999999999999999999865 89999999999987542110
Q ss_pred -------------------CccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHH
Q psy2372 290 -------------------SIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSL 349 (447)
Q Consensus 290 -------------------~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i 349 (447)
.....+++++| ++++++++++++.+|++.|.+++.+.+||+|+ |+++|+||..||++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGivt~~Dil~~l 160 (170)
T 4esy_A 82 ASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD-GVPVGIVTRRDLLKLL 160 (170)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHTTTS
T ss_pred hhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 01125789999 56789999999999999999999999999985 9999999999999998
Q ss_pred hcc
Q psy2372 350 IGD 352 (447)
Q Consensus 350 ~ge 352 (447)
+.+
T Consensus 161 ~~~ 163 (170)
T 4esy_A 161 LLE 163 (170)
T ss_dssp CCC
T ss_pred Hhc
Confidence 775
No 27
>2nqw_A CBS domain protein; PFAM03471, hemolysins, CBS domains, transporter associated D CORC_HLYC, structural genomics, PSI-2; 1.30A {Porphyromonas gingivalis} SCOP: d.145.1.4
Probab=99.78 E-value=6.9e-19 Score=142.75 Aligned_cols=85 Identities=13% Similarity=0.312 Sum_probs=73.4
Q ss_pred ccceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcC--CCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecCe
Q psy2372 358 QEEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKI--SRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNNK 435 (447)
Q Consensus 358 ~~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~--~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~r 435 (447)
.+.+.+.++|+|+++|+++++|+++.||++ -..++ .++|+|||||+++++|++|++|+++.++||+|+|.+++++|
T Consensus 6 ~~~i~~~~dg~~~v~G~~~l~dl~~~l~~~--~~~~~~~~~~~~TlgG~i~~~lg~iP~~Gd~v~~~~~~f~V~~~d~~r 83 (93)
T 2nqw_A 6 ELPFKVLGDGSYLFEGKTSLSDVRHYLDLP--ENAFGELGDEVDTLSGLFLEIKQELPHVGDTAVYEPFRFQVTQMDKRR 83 (93)
T ss_dssp -CCEEECTTSCEEEETTCBHHHHHHHHTCC--TTTTHHHHTTCSBHHHHHHHHHCSCCCTTCEEEETTEEEEEEEECSSS
T ss_pred cCCeEEeCCCEEEEEcccCHHHHHHHhCCC--cccccccCCCcccHHHHHHHHhCcCCCCCCEEEECCEEEEEEEeeCCE
Confidence 346788899999999999999999999973 10000 04799999999999999999999999999999999999999
Q ss_pred eeEEEEEec
Q psy2372 436 IERLLVTIL 444 (447)
Q Consensus 436 i~~v~v~~~ 444 (447)
|.+|++++.
T Consensus 84 I~~V~v~~~ 92 (93)
T 2nqw_A 84 IIEIKIFPF 92 (93)
T ss_dssp EEEEEECCC
T ss_pred EEEEEEEEC
Confidence 999999754
No 28
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.77 E-value=1.5e-18 Score=153.02 Aligned_cols=132 Identities=15% Similarity=0.247 Sum_probs=114.0
Q ss_pred hhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCc----cCC
Q psy2372 219 RALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSI----VNI 294 (447)
Q Consensus 219 ~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~----~~~ 294 (447)
+..++...+++++|+|+.+++++++++++.++++.|.+++++++||+|++ ++++|+++.+|+++....+... ...
T Consensus 8 ~~~~l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~ 86 (156)
T 3ctu_A 8 EFETFLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMADT 86 (156)
T ss_dssp HHHHHHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHTTS
T ss_pred HHHHHHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhccccccccccC
Confidence 33455667899999999999999999999999999999999999999855 8999999999999887542210 126
Q ss_pred Chhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 295 DITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 295 ~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
++.++| +++.++++++++.++++.|.+++ .+||+|++|+++|+||..|+++.+.+.+
T Consensus 87 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~ 144 (156)
T 3ctu_A 87 DIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALL 144 (156)
T ss_dssp BGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHS
T ss_pred cHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHH
Confidence 799999 56789999999999999999876 6999999999999999999999998766
No 29
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.76 E-value=3.5e-18 Score=166.82 Aligned_cols=138 Identities=16% Similarity=0.221 Sum_probs=125.6
Q ss_pred CccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhC-----CCcEEEEEeCCCCeEEEEEEhhhH
Q psy2372 207 GIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDS-----SYNYFPVYKKSISKIIGTLNTKTL 281 (447)
Q Consensus 207 g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~-----~~s~iPV~~~~~~~ivGiv~~~DL 281 (447)
+.++.+|+..+.+++.+.+.+|+++|++ +++++++++++.++++.|+++ +++++||+|++ ++++|+|+.+|+
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dl 194 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDL 194 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHH
Confidence 4688889999999999999999999985 778999999999999999987 88999999865 899999999999
Q ss_pred HHHhHhCCCccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 282 FKKIISNRSIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 282 l~~~~~~~~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
+... .. .++.++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++.+.++.
T Consensus 195 l~~~---~~---~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~e~ 261 (286)
T 2oux_A 195 IVND---DD---TLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDDEA 261 (286)
T ss_dssp TTSC---TT---SBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred HcCC---CC---CcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 8752 22 6799999 67889999999999999999999999999999999999999999999998765
No 30
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.76 E-value=1.5e-18 Score=151.95 Aligned_cols=129 Identities=20% Similarity=0.306 Sum_probs=112.8
Q ss_pred ccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-----CccCCCh
Q psy2372 222 KLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-----SIVNIDI 296 (447)
Q Consensus 222 ~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-----~~~~~~v 296 (447)
.+.+++|+++|+|+.++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++...... .....++
T Consensus 11 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v 89 (150)
T 3lqn_A 11 EFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEMKV 89 (150)
T ss_dssp HHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBG
T ss_pred hhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcCCH
Confidence 46678999999998788899999999999999999999999999865 89999999999998774211 1123679
Q ss_pred hhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 297 TSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 297 ~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
.++|+ ++.++++++++.++++.|.+++. +||+|++|+++|+||..|+++.+.+.+
T Consensus 90 ~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~ 145 (150)
T 3lqn_A 90 EQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKV 145 (150)
T ss_dssp GGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred HHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHh
Confidence 99995 67899999999999999998875 999999999999999999999988765
No 31
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=2.2e-18 Score=153.78 Aligned_cols=134 Identities=18% Similarity=0.247 Sum_probs=116.9
Q ss_pred hhhcccCceeeceeeeeC-CceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-CccCCC
Q psy2372 218 SRALKLDDQCAITLMTPR-MKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-SIVNID 295 (447)
Q Consensus 218 ~~~l~l~~~~V~dvM~pr-~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-~~~~~~ 295 (447)
.....+..++|+++|+|+ .++.++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++.+..+. .....+
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 344567889999999975 567899999999999999999999999999855 89999999999998765432 122367
Q ss_pred hhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 296 ITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 296 v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
+.++| +++.++++++++.++++.|.+++.+.+||+|+ |+++|+||..|+++.+.++.
T Consensus 95 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~ 152 (165)
T 3fhm_A 95 VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEI 152 (165)
T ss_dssp GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC-
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHH
Confidence 99999 56789999999999999999999999999999 99999999999999998876
No 32
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=3.6e-18 Score=149.08 Aligned_cols=129 Identities=16% Similarity=0.237 Sum_probs=109.9
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhC-------------CC
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISN-------------RS 290 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~-------------~~ 290 (447)
...+|+++|+|+.+++++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++....+ ..
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~~ 81 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLSK 81 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC---
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHHH
Confidence 457899999987788899999999999999999999999999865 8999999999998643211 01
Q ss_pred ccCCChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 291 IVNIDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 291 ~~~~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
....++.++|+ +++++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.+..
T Consensus 82 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~ 145 (152)
T 4gqw_A 82 TNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIK 145 (152)
T ss_dssp --CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC--
T ss_pred hccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhcc
Confidence 11267999995 5789999999999999999999999999999999999999999999998754
No 33
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.76 E-value=3.9e-18 Score=150.31 Aligned_cols=134 Identities=14% Similarity=0.239 Sum_probs=110.7
Q ss_pred HhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-----Cc
Q psy2372 217 ASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-----SI 291 (447)
Q Consensus 217 i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-----~~ 291 (447)
.++...+.+.+|+++|+|+.++.++++++++.++++.|.+++++++||+|++ ++++|+++.+|+++...... ..
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHHh
Confidence 3455667889999999987788899999999999999999999999999864 89999999999998764311 11
Q ss_pred cCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 292 VNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 292 ~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
...++.++| +++.++++++++.++++.|.+++. +||+|++|+++|+||..|+++.+.+..
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~ 141 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQL 141 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTT
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHh
Confidence 236799999 567899999999999999999876 999999999999999999999998765
No 34
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.75 E-value=1.1e-17 Score=144.20 Aligned_cols=128 Identities=12% Similarity=0.203 Sum_probs=111.3
Q ss_pred cccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHH-HhHhCCCccCCChhhh
Q psy2372 221 LKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFK-KIISNRSIVNIDITSA 299 (447)
Q Consensus 221 l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~-~~~~~~~~~~~~v~~i 299 (447)
+.+.+.+|+++|++ ++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++ ...++. ....++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGL-PYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCC-CTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCC-cccCCHHHH
Confidence 35778999999984 67799999999999999999999999999854 89999999999984 333221 223679999
Q ss_pred c-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 300 I-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 300 m-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
| +++.++++++++.++++.|.+++.+.+ |+|++|+++|+||..|+++.+.+++
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~ 131 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRL 131 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCS
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHH
Confidence 9 567899999999999999999999999 9998899999999999999998765
No 35
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.75 E-value=5.3e-18 Score=142.88 Aligned_cols=119 Identities=16% Similarity=0.226 Sum_probs=107.2
Q ss_pred eeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc-CCCe
Q psy2372 226 QCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI-QPPL 304 (447)
Q Consensus 226 ~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~~~ 304 (447)
++|+++|++ ++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++....+. .++.++| +++.
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~----~~v~~~~~~~~~ 73 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNK----KTIEEIMTRNVI 73 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTC----CBGGGTSBSSCC
T ss_pred CchHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcc----cCHHHHhcCCCe
Confidence 368999985 56789999999999999999999999999855 89999999999999876543 4799999 5678
Q ss_pred eeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 305 ~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.+
T Consensus 74 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 74 TAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp CEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred EECCCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999998765
No 36
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.75 E-value=6.2e-18 Score=167.56 Aligned_cols=145 Identities=12% Similarity=0.166 Sum_probs=122.6
Q ss_pred ccchHHHHHHhhhccc-CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhH
Q psy2372 208 IFNKIEYNLASRALKL-DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKII 286 (447)
Q Consensus 208 ~l~~~E~~~i~~~l~l-~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~ 286 (447)
-++++|+++++++.++ ++.+|+|+|+|+.++++++.++|+.++++.|.+++++++||++++.++++|+++.+|++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~~ 82 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVIK 82 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHHH
Confidence 3567889999999985 459999999999999999999999999999999999999999976689999999999998653
Q ss_pred hCC----Ccc------CCChhhh--------cCCC--eeeCCCCCHHHHHHHHHHcCCceEEEEcCCCC-----EEEEEe
Q psy2372 287 SNR----SIV------NIDITSA--------IQPP--LFIPETISTMQLLETFKKNKSELSLVIDEYGE-----LEGIIT 341 (447)
Q Consensus 287 ~~~----~~~------~~~v~~i--------m~~~--~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~-----~iGiVT 341 (447)
... ... ..++..+ ++++ .++++++++.++++.|++++.+.+||+|++|+ ++|+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Givt 162 (334)
T 2qrd_G 83 YYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVLT 162 (334)
T ss_dssp HHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEEE
T ss_pred HHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEee
Confidence 110 000 1344444 4667 89999999999999999999999999998865 999999
Q ss_pred HHHHHHHHhcc
Q psy2372 342 INDIIHSLIGD 352 (447)
Q Consensus 342 ~~DIle~i~ge 352 (447)
.+|+++.+.++
T Consensus 163 ~~dl~~~~~~~ 173 (334)
T 2qrd_G 163 QYRILKFISMN 173 (334)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999988653
No 37
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.74 E-value=8.7e-18 Score=144.42 Aligned_cols=123 Identities=15% Similarity=0.299 Sum_probs=107.5
Q ss_pred eeceeeeeC-CceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhH-hCCCccCCChhhhc-CCC
Q psy2372 227 CAITLMTPR-MKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKII-SNRSIVNIDITSAI-QPP 303 (447)
Q Consensus 227 ~V~dvM~pr-~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~-~~~~~~~~~v~~im-~~~ 303 (447)
+|+++|+|+ +++.++++++++.++++.|.+++++.+||+| + ++++|+++.+|+++... ++......++.++| +++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~~ 84 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQV 84 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCSC
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCCC
Confidence 799999976 6788999999999999999999999999998 4 89999999999996433 22222237899999 567
Q ss_pred eeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 304 LFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 304 ~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+++.+.++
T Consensus 85 ~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 85 AYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp CCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred eEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 8999999999999999999999999999 69999999999999998764
No 38
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.74 E-value=2.1e-17 Score=141.50 Aligned_cols=126 Identities=17% Similarity=0.258 Sum_probs=111.5
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc-C
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI-Q 301 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~ 301 (447)
+++.+|+++|++ ++.++++++++.++++.|.+++++.+||+| + ++++|+++.+|+++...++.. ...+++++| +
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~-~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKS-LETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCC-TTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCC-cccCHHHHcCC
Confidence 457899999986 567899999999999999999999999999 4 899999999999987765321 236799999 5
Q ss_pred CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 302 PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 302 ~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.+..
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~ 127 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMF 127 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHH
Confidence 7889999999999999999999999999998999999999999999987643
No 39
>2p3h_A Uncharacterized CBS domain-containing protein; structural genomics, CORC_HLYC, PFAM03471, putative transpor protein; 1.80A {Corynebacterium glutamicum} SCOP: d.145.1.4
Probab=99.74 E-value=1.5e-18 Score=142.26 Aligned_cols=81 Identities=21% Similarity=0.400 Sum_probs=75.3
Q ss_pred cceEEecCCeEEEeccCCHHHHHHHhCCCCCCCCcCCCCcccHhHHHHhhcCCCCCCCcEEEEcCEEEEEEEeecC----
Q psy2372 359 EEIEFCEDGSWIISASMTFDRFKELLSNQVNFPVKISRNYHTLAGFVMTFLGHIPKISENFIWKNIKIEVIDMNNN---- 434 (447)
Q Consensus 359 ~~~~~~~~~~~~v~g~~~i~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~~lg~iP~~g~~~~~~~~~f~v~~~~~~---- 434 (447)
+.+.+.++|+|+++|+++++|+++.||++ +|+ ++|+|+|||+++++|++|++||+++++ |+|+|.+++++
T Consensus 4 ~~i~~~~dg~~~v~G~~~l~dl~~~lg~~--l~~---e~~dTlgGli~~~lg~iP~~Gd~v~~~-~~f~V~~~d~~~~~r 77 (101)
T 2p3h_A 4 EDITETSPDKWLIDGDTPLDEVERAIGYE--LPE---GDYETISGLLFDHANALLKTGDVIEIP-LDFEPEDYLNNTSPT 77 (101)
T ss_dssp CCEEEEETTEEEEETTCBHHHHHHHHTSC--CCC---SSCCBHHHHHHHHHCSCCCTTCEEEEE-CCCCGGGGTTCSSCC
T ss_pred CceEEeCCCEEEEEccCCHHHHHHHhCCC--CCC---CCCccHHHHHHHHhCCCCCCCCEEEEe-EEEEEEEEeCCCCcC
Confidence 34778899999999999999999999999 873 479999999999999999999999999 99999999999
Q ss_pred -eeeEEEEEecC
Q psy2372 435 -KIERLLVTILN 445 (447)
Q Consensus 435 -ri~~v~v~~~~ 445 (447)
||.+|++++.+
T Consensus 78 ~rI~~V~v~~~~ 89 (101)
T 2p3h_A 78 QRILRITVLEVE 89 (101)
T ss_dssp CCEEEEEEEEEE
T ss_pred CEEEEEEEEECC
Confidence 99999998764
No 40
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.74 E-value=6.3e-18 Score=148.17 Aligned_cols=120 Identities=13% Similarity=0.243 Sum_probs=107.4
Q ss_pred eeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc-CCCe
Q psy2372 226 QCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI-QPPL 304 (447)
Q Consensus 226 ~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~~~ 304 (447)
++|+++|+|+.++.++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++.+.++......++.++| +++.
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 106 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGI 106 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESCC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCCe
Confidence 5899999987688899999999999999999999999999855 8999999999999887654332347899999 5678
Q ss_pred eeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHH
Q psy2372 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIH 347 (447)
Q Consensus 305 ~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle 347 (447)
++++++++.++++.|.+++.+.+||+|+. +++|+||.+|+++
T Consensus 107 ~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 107 RIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp EECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred EECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 99999999999999999999999999975 9999999999875
No 41
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.73 E-value=8.5e-18 Score=151.25 Aligned_cols=128 Identities=15% Similarity=0.239 Sum_probs=110.2
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC---------------
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR--------------- 289 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~--------------- 289 (447)
.++|+++|+|+.+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++......
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~~ 81 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDST 81 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------C
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccch
Confidence 36799999987788899999999999999999999999999865 89999999999985321000
Q ss_pred ------------CccCCChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 290 ------------SIVNIDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 290 ------------~~~~~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
.....+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+....
T Consensus 82 ~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~~~ 158 (180)
T 3sl7_A 82 WKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIK 158 (180)
T ss_dssp CCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHh
Confidence 011267999995 5789999999999999999999999999999999999999999999998754
No 42
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.73 E-value=2.9e-17 Score=142.33 Aligned_cols=121 Identities=9% Similarity=0.167 Sum_probs=107.4
Q ss_pred eeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCC--eEEEEEEhhhHHHHhHhCCCccCCChhhhc-CC
Q psy2372 226 QCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSIS--KIIGTLNTKTLFKKIISNRSIVNIDITSAI-QP 302 (447)
Q Consensus 226 ~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~--~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~ 302 (447)
.+|+++|++ ++.++++++++.++++.|.+++++++||+|++ + +++|+++.+|+++...++.. ...++.++| ++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~-~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLD-LDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCC-TTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCC-CCCCHHHHcCCC
Confidence 579999984 67899999999999999999999999999864 5 89999999999987755321 236799999 56
Q ss_pred CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 303 PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 303 ~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
+.+++++ ++.++++.|.+++.+.+||+|++|+++|+||.+|+++++.+
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHHH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHHH
Confidence 7899999 99999999999999999999999999999999999987764
No 43
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.73 E-value=4.6e-18 Score=167.71 Aligned_cols=180 Identities=12% Similarity=0.085 Sum_probs=139.8
Q ss_pred hcCccchHHHHHHhhhccc-CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHH
Q psy2372 205 DIGIFNKIEYNLASRALKL-DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFK 283 (447)
Q Consensus 205 ~~g~l~~~E~~~i~~~l~l-~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~ 283 (447)
+.|.++++|+++++++++| .+.++.|+|+|+.++++++.++|+.+|++.|.+++++++||+|++.++++|+++.+|++.
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~~ 87 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVKKSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFIN 87 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHHHHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHHHHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHHH
Confidence 4466888999999999998 999999999999999999999999999999999999999999977679999999999998
Q ss_pred HhHh---CCCc-------cCCChhhhc-------CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCC-----EEEEEe
Q psy2372 284 KIIS---NRSI-------VNIDITSAI-------QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGE-----LEGIIT 341 (447)
Q Consensus 284 ~~~~---~~~~-------~~~~v~~im-------~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~-----~iGiVT 341 (447)
.+.. .... ....+.+++ +++.++++++++.++++.|.+++.+.+||+|++|+ ++|+||
T Consensus 88 ~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Givt 167 (323)
T 3t4n_C 88 VIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVLT 167 (323)
T ss_dssp HHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEEE
T ss_pred HHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEec
Confidence 6521 0000 001233433 56789999999999999999999999999999876 999999
Q ss_pred HHHHHHHHhccc-ccc-cccceEE----ecCCeEEEeccCCHHHHHHHh
Q psy2372 342 INDIIHSLIGDI-SNS-YQEEIEF----CEDGSWIISASMTFDRFKELL 384 (447)
Q Consensus 342 ~~DIle~i~gei-~e~-~~~~~~~----~~~~~~~v~g~~~i~~~~~~l 384 (447)
.+|+++.+.+.. ... ....+.. ...+.+.++...++.++.+.+
T Consensus 168 ~~di~~~l~~~~~~~~~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m 216 (323)
T 3t4n_C 168 QYRILKFVALNCRETHFLKIPIGDLNIITQDNMKSCQMTTPVIDVIQML 216 (323)
T ss_dssp HHHHHHHHHHHCGGGGGCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHH
T ss_pred HHHHHHHHHhcCCchhhhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHH
Confidence 999999887654 211 1111111 124455677777777765544
No 44
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.73 E-value=1.3e-17 Score=142.18 Aligned_cols=123 Identities=13% Similarity=0.146 Sum_probs=108.4
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc-CC
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI-QP 302 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~ 302 (447)
.+.+++++|++ ++.++++++++.++++.|.+++++.+||+|+ ++++|+++.+|+++...++.. ...+++++| ++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~-~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPT-VKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCC-TTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCc-ccCcHHHHccCC
Confidence 46789999985 5678999999999999999999999999985 899999999999987654322 125688999 46
Q ss_pred CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 303 PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 303 ~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
+.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++.+..
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 7899999999999999999999999999999999999999999998754
No 45
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.73 E-value=3.3e-17 Score=145.23 Aligned_cols=125 Identities=12% Similarity=0.190 Sum_probs=110.4
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC-
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ- 301 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~- 301 (447)
+.+++|+++|++ . +++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++....+......++.++|+
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~ 89 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVYDAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMTR 89 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHHHHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHcC
Confidence 567899999984 3 489999999999999999999999999855 89999999999999775433323468999995
Q ss_pred --CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCC---CEEEEEeHHHHHHHHhc
Q psy2372 302 --PPLFIPETISTMQLLETFKKNKSELSLVIDEYG---ELEGIITINDIIHSLIG 351 (447)
Q Consensus 302 --~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G---~~iGiVT~~DIle~i~g 351 (447)
++.++++++++.++++.|.+++.+.+||+|++| +++|+||..|+++.+..
T Consensus 90 ~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 90 MPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp TTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred CCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 678999999999999999999999999999988 99999999999999875
No 46
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.73 E-value=2.8e-17 Score=138.85 Aligned_cols=121 Identities=18% Similarity=0.257 Sum_probs=106.4
Q ss_pred eeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC-CCe
Q psy2372 226 QCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ-PPL 304 (447)
Q Consensus 226 ~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~-~~~ 304 (447)
++|+++|++ ++.++++++++.++++.|.+++++.+||+| + ++++|+++.+|+++...++......++.++|. ++.
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~~ 76 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDLV 76 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGGG
T ss_pred CCHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCCe
Confidence 368899985 677899999999999999999999999998 4 89999999999998776543222368999994 678
Q ss_pred eeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 305 ~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
++++++++.++++.|.+++.+.+||+|+ |+++|+||..|+++.+.+
T Consensus 77 ~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 77 TISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp EECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred EECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 9999999999999999999999999998 999999999999998865
No 47
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.72 E-value=3e-17 Score=141.29 Aligned_cols=127 Identities=21% Similarity=0.304 Sum_probs=109.7
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhH-HHHhHhCCCccCCChhhhcC
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTL-FKKIISNRSIVNIDITSAIQ 301 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DL-l~~~~~~~~~~~~~v~~im~ 301 (447)
+.+.+|+++|++ ++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+ ++.+..+. ....+++++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~-~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKY-TLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCC-CSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcc-cCCcCHHHHhC
Confidence 567899999985 66789999999999999999999999999865 899999999999 87665432 12367999995
Q ss_pred -CCeeeCCCCCHHHHHHHHHHcC-----CceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 302 -PPLFIPETISTMQLLETFKKNK-----SELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 302 -~~~~V~~~~~l~~al~~m~~~~-----~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
++.++++++++.++++.|.+++ .+.+||+|++|+++|+||..|+++.+.++|
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~i 138 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISKII 138 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHHC-
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHhhC
Confidence 6789999999999999999999 999999998899999999999999887643
No 48
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.72 E-value=1e-17 Score=143.43 Aligned_cols=126 Identities=15% Similarity=0.237 Sum_probs=106.4
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHH-HHhHhCCCccCCChhhhc-
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLF-KKIISNRSIVNIDITSAI- 300 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl-~~~~~~~~~~~~~v~~im- 300 (447)
+.-.+|+++|++ ++.++++++++.++++.|.+++++++||+|++ ++++|+++.+|++ +....+......++.++|
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 344689999985 66789999999999999999999999999855 8999999999999 455443322236799999
Q ss_pred CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 301 QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 301 ~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
+++.++++++++.++++.|.+++.+.+||+|+ |+++|+||.+|+++.+.++
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~~ 132 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPEH 132 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC--
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 56789999999999999999999999999998 9999999999999987653
No 49
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.72 E-value=1.7e-17 Score=146.86 Aligned_cols=129 Identities=19% Similarity=0.249 Sum_probs=112.4
Q ss_pred ccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCC-----ccCCCh
Q psy2372 222 KLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRS-----IVNIDI 296 (447)
Q Consensus 222 ~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~-----~~~~~v 296 (447)
.+.+.+|+++|+|+.++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++....... ....++
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v 88 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQITV 88 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBH
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCCH
Confidence 56778999999987788899999999999999999999999999864 799999999999987654210 123679
Q ss_pred hhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 297 TSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 297 ~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
.++|. ++.++++++++.++++.|.+++. +||+|++|+++|+||..|+++.+.+.+
T Consensus 89 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~ 144 (159)
T 1yav_A 89 EEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHI 144 (159)
T ss_dssp HHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC
T ss_pred HHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHH
Confidence 99995 67899999999999999998765 999998899999999999999998876
No 50
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.72 E-value=2.4e-17 Score=163.11 Aligned_cols=183 Identities=13% Similarity=0.114 Sum_probs=132.3
Q ss_pred HHhchhcCccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhh
Q psy2372 200 FREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTK 279 (447)
Q Consensus 200 v~~~~~~g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~ 279 (447)
...+.++|.+.+.+++.+++. |++.+|+|+|+|+.++++++.++++.++++.|.+++++++||++++.++++|+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~ 88 (330)
T 2v8q_E 11 APENEHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTIT 88 (330)
T ss_dssp ------------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETTTTEEEEEEEHH
T ss_pred CCCChHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCCCCeEEEEEEHH
Confidence 345566677777777777776 457899999999999999999999999999999999999999997668999999999
Q ss_pred hHHHHhHhCC--------CccCCCh-------hhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcC-CCCEEEEEeH
Q psy2372 280 TLFKKIISNR--------SIVNIDI-------TSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDE-YGELEGIITI 342 (447)
Q Consensus 280 DLl~~~~~~~--------~~~~~~v-------~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe-~G~~iGiVT~ 342 (447)
|++..+.... ......+ +++| +++.++++++++.++++.|++++.+.+||+|+ +|+++|+||.
T Consensus 89 Dll~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~ 168 (330)
T 2v8q_E 89 DFINILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTH 168 (330)
T ss_dssp HHHHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECH
T ss_pred HHHHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcH
Confidence 9997653210 0001223 2445 56789999999999999999999999999998 8999999999
Q ss_pred HHHHHHHhccc-ccc-c---ccceEE---e-cCCeEEEeccCCHHHHHHHh
Q psy2372 343 NDIIHSLIGDI-SNS-Y---QEEIEF---C-EDGSWIISASMTFDRFKELL 384 (447)
Q Consensus 343 ~DIle~i~gei-~e~-~---~~~~~~---~-~~~~~~v~g~~~i~~~~~~l 384 (447)
+|+++.+.+.. +.. . ...+.. . ..+.+.++...++.++.+.+
T Consensus 169 ~dl~~~~~~~~~~~~~~~~~~~~v~~~~v~~~~~~~~v~~~~~l~~~~~~m 219 (330)
T 2v8q_E 169 KRILKFLKLFITEFPKPEFMSKSLEELQIGTYANIAMVRTTTPVYVALGIF 219 (330)
T ss_dssp HHHHHHHHHHSCSSSCCGGGGSBHHHHTCSBCSSCCCEETTCBHHHHHHHH
T ss_pred HHHHHHHHHHhhccCchhhhcCCHHHhcccCcCCceEECCCCCHHHHHHHH
Confidence 99999886543 211 0 000000 0 14556788888888876554
No 51
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.72 E-value=5.9e-17 Score=143.19 Aligned_cols=128 Identities=18% Similarity=0.259 Sum_probs=111.6
Q ss_pred ccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcE-EEEEeCCCCeEEEEEEhhhHHHHhHhC------------
Q psy2372 222 KLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNY-FPVYKKSISKIIGTLNTKTLFKKIISN------------ 288 (447)
Q Consensus 222 ~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~-iPV~~~~~~~ivGiv~~~DLl~~~~~~------------ 288 (447)
.+...+|+++|++ ++.++++++++.++++.|.+++++. +||+|++ +++|+++.+|+++.....
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELIR 87 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC------
T ss_pred hhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHHH
Confidence 4677899999985 7889999999999999999999999 9999854 999999999999875310
Q ss_pred ---CCccCCChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 289 ---RSIVNIDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 289 ---~~~~~~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
......++.++|.+++++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.+++
T Consensus 88 ~~~~~~~~~~v~~im~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 88 SSMKRLIAKNASEIMLDPVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp -CCCCCSSCBHHHHCBCCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred HHHHHHcCCcHHHHcCCCeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 11123679999966889999999999999999999999999998899999999999999987654
No 52
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.71 E-value=5.4e-17 Score=143.19 Aligned_cols=125 Identities=15% Similarity=0.266 Sum_probs=110.7
Q ss_pred eeeceeeeeC----CceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-CccCCChhhhc
Q psy2372 226 QCAITLMTPR----MKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-SIVNIDITSAI 300 (447)
Q Consensus 226 ~~V~dvM~pr----~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-~~~~~~v~~im 300 (447)
.+|+++|+|+ +++.++++++++.++++.|.+++++.+||.+ .++++|+++.+|+++.+.... .....+++++|
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 84 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEIM 84 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHHS
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHHc
Confidence 4799999987 6788999999999999999999999999954 489999999999998765432 11237899999
Q ss_pred C-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 301 Q-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 301 ~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
. ++.++++++++.++++.|.+++.+.+||+| +|+++|+||..|+++.+.++.
T Consensus 85 ~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~ 137 (157)
T 4fry_A 85 TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQ 137 (157)
T ss_dssp BSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTC
T ss_pred CCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHH
Confidence 4 678999999999999999999999999999 699999999999999999876
No 53
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.70 E-value=1.2e-16 Score=138.23 Aligned_cols=126 Identities=10% Similarity=0.189 Sum_probs=106.8
Q ss_pred cCceeece---eeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-CccCCChhh
Q psy2372 223 LDDQCAIT---LMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-SIVNIDITS 298 (447)
Q Consensus 223 l~~~~V~d---vM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-~~~~~~v~~ 298 (447)
+-+.++++ +|+ +++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++....+. .....++.+
T Consensus 5 ~~~~~v~~~~~~~~--~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~ 81 (144)
T 2nyc_A 5 FLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVGE 81 (144)
T ss_dssp GGGSBGGGSSCCBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHHH
T ss_pred hhhcchhhcCCCCC--CCceEECCCCcHHHHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHHH
Confidence 34567788 776 467789999999999999999999999999865 89999999999998765431 111267999
Q ss_pred hcC-------CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 299 AIQ-------PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 299 im~-------~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
+|. ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++.+.+
T Consensus 82 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 82 ALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 884 47899999999999999999999999999999999999999999999875
No 54
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.69 E-value=1.1e-16 Score=140.55 Aligned_cols=124 Identities=13% Similarity=0.233 Sum_probs=107.1
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-CccCCChhhhc-
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-SIVNIDITSAI- 300 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-~~~~~~v~~im- 300 (447)
+++.+|+++ +++.++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++....+. .....++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m~ 94 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQ 94 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHHHHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHHh
Confidence 456778887 467789999999999999999999999999865 89999999999998775431 11125789998
Q ss_pred ------CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 301 ------QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 301 ------~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
+++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 95 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 95 HRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp TCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC-
T ss_pred hhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 578899999999999999999999999999999999999999999998754
No 55
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.69 E-value=9.5e-17 Score=142.51 Aligned_cols=126 Identities=13% Similarity=0.105 Sum_probs=108.8
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhC--------CCccCCC
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISN--------RSIVNID 295 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~--------~~~~~~~ 295 (447)
...+|+++|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++..... ......+
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~ 79 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETP 79 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCCB
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhcccC
Confidence 45789999985 66789999999999999999999999999854 8999999999999876421 1112367
Q ss_pred hhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 296 ITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 296 v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
+.++|. ++.++++++++.++++.|.+++.+.+||+|+ |+++|+||..|+++.+.+.+
T Consensus 80 v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~~~ 137 (160)
T 2o16_A 80 LFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAINLL 137 (160)
T ss_dssp HHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHHHH
T ss_pred HHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHh
Confidence 999995 5679999999999999999999999999998 99999999999999987754
No 56
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.69 E-value=1.2e-16 Score=145.14 Aligned_cols=125 Identities=17% Similarity=0.261 Sum_probs=109.6
Q ss_pred eeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh-CCCccCCChhhhcC-CC
Q psy2372 226 QCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS-NRSIVNIDITSAIQ-PP 303 (447)
Q Consensus 226 ~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~-~~~~~~~~v~~im~-~~ 303 (447)
.+|+++|+ +++++++.++++.++++.|.+++++++||++++ ++++|+++.+|+++.... .......+++++|+ ++
T Consensus 9 ~~v~~im~--~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~~ 85 (184)
T 1pvm_A 9 MRVEKIMN--SNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKPI 85 (184)
T ss_dssp CBGGGTSB--TTCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSSC
T ss_pred cCHHHhcC--CCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCCC
Confidence 68999998 467899999999999999999999999999855 899999999999987653 11112367999995 67
Q ss_pred eeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc-cc
Q psy2372 304 LFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG-DI 353 (447)
Q Consensus 304 ~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g-ei 353 (447)
.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++.+.+ ++
T Consensus 86 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~~~~ 136 (184)
T 1pvm_A 86 PKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSRASI 136 (184)
T ss_dssp CEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCHHHH
T ss_pred cEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHhhhH
Confidence 899999999999999999999999999999999999999999998877 44
No 57
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.68 E-value=1e-16 Score=156.13 Aligned_cols=183 Identities=13% Similarity=0.142 Sum_probs=136.9
Q ss_pred CCCHHHHHHHHHhchhcCccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCC
Q psy2372 190 LITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSI 269 (447)
Q Consensus 190 ~~s~~el~~lv~~~~~~g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~ 269 (447)
.+|.+|+...+..+... .+...+.+++.+.+++++|++ +++++++++++.++++.|.+++++++||+|++
T Consensus 64 ivT~~Di~~~~~~~~~~-------~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~- 133 (296)
T 3ddj_A 64 LLTTRDLLSTVESYCKD-------SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN- 133 (296)
T ss_dssp EEEHHHHHGGGTTCC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTT-
T ss_pred EEeHHHHHHHhcccccc-------cccchhhHHHhcccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC-
Confidence 35777777665433221 223344445567899999996 66789999999999999999999999999855
Q ss_pred CeEEEEEEhhhHHHHhHhCCCccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHH
Q psy2372 270 SKIIGTLNTKTLFKKIISNRSIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHS 348 (447)
Q Consensus 270 ~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~ 348 (447)
++++|+++.+|+++....... ..++.++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++.
T Consensus 134 ~~lvGivt~~dl~~~~~~~~~--~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~ 211 (296)
T 3ddj_A 134 DKPVGIVTEREFLLLYKDLDE--IFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQ 211 (296)
T ss_dssp SCEEEEEEHHHHGGGGGGSCC--CCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CcEEEEEeHHHHHHhhhcccc--cccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 899999999999987654332 26899999 577899999999999999999999999999999999999999999998
Q ss_pred Hhccc-c---cc-cccceE-EecCCeEEEeccCCHHHHHHHh
Q psy2372 349 LIGDI-S---NS-YQEEIE-FCEDGSWIISASMTFDRFKELL 384 (447)
Q Consensus 349 i~gei-~---e~-~~~~~~-~~~~~~~~v~g~~~i~~~~~~l 384 (447)
+.... . +. ....+. ....+.+.++...++.++.+.+
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m 253 (296)
T 3ddj_A 212 LAKAVDKLDPDYFYGKVVKDVMVTNLVTIDELASVNRAAAEM 253 (296)
T ss_dssp HHHHHHHTCTHHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHH
T ss_pred HHHHHhhcChhhhcCcCHHHHhCCCCeEECCCCcHHHHHHHH
Confidence 87432 1 10 000000 0122445667777777765543
No 58
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.68 E-value=2.5e-16 Score=139.44 Aligned_cols=132 Identities=11% Similarity=0.141 Sum_probs=110.1
Q ss_pred hhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeC-CCCeEEEEEEhhhHHHHhHhCCC----ccC
Q psy2372 219 RALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKK-SISKIIGTLNTKTLFKKIISNRS----IVN 293 (447)
Q Consensus 219 ~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~-~~~~ivGiv~~~DLl~~~~~~~~----~~~ 293 (447)
+.+.+.+.+|+++|++ ++.+++.++++.++++.|.+++++.+||+|+ +.++++|+++.+|+++....+.. ...
T Consensus 6 ~~~~~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~~~ 83 (164)
T 2pfi_A 6 RNIGSHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQ 83 (164)
T ss_dssp ----CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------CCC
T ss_pred ccccccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCccc
Confidence 3456778899999985 6778999999999999999999999999985 25899999999999987654221 012
Q ss_pred CChhhhcCC-------CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 294 IDITSAIQP-------PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 294 ~~v~~im~~-------~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
.++.++|.+ +.++++++++.++++.|.+++.+.+||+| +|+++|+||..|+++.+.+..
T Consensus 84 ~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 84 QCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp CBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHHH
T ss_pred chhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhhh
Confidence 568888853 57999999999999999999999999999 699999999999999988754
No 59
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.68 E-value=1.3e-16 Score=144.26 Aligned_cols=130 Identities=20% Similarity=0.333 Sum_probs=110.6
Q ss_pred cCceeeceeeeeCCc--eEEE--cCCCCHHHHHHHHHhCCCcEEEEEe-CCCCeEEEEEEhhhHHHHhHhCC--------
Q psy2372 223 LDDQCAITLMTPRMK--VNFI--NIDDNIEKNLIKILDSSYNYFPVYK-KSISKIIGTLNTKTLFKKIISNR-------- 289 (447)
Q Consensus 223 l~~~~V~dvM~pr~~--v~~v--~~~~tl~e~~~~~~~~~~s~iPV~~-~~~~~ivGiv~~~DLl~~~~~~~-------- 289 (447)
+.+.+|+++|+|..+ ++++ ++++++.++++.|.+++++.+||++ ++.++++|+|+.+|+++......
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 357899999998643 6677 9999999999999999999999993 24589999999999998764320
Q ss_pred ----------------CccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 290 ----------------SIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 290 ----------------~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
.....++.++| ++++++++++++.++++.|.+++.+.+||+| +|+++|+||..|+++.+.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 88 TSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp TCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred cceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHh
Confidence 11225789999 6788999999999999999999999999999 79999999999999998875
Q ss_pred c
Q psy2372 353 I 353 (447)
Q Consensus 353 i 353 (447)
.
T Consensus 167 ~ 167 (185)
T 2j9l_A 167 A 167 (185)
T ss_dssp C
T ss_pred h
Confidence 4
No 60
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.65 E-value=4.1e-16 Score=149.81 Aligned_cols=154 Identities=17% Similarity=0.229 Sum_probs=126.7
Q ss_pred CCCHHHHHHHHHhchhcCccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCC
Q psy2372 190 LITEEEIYKLFREGFDIGIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSI 269 (447)
Q Consensus 190 ~~s~~el~~lv~~~~~~g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~ 269 (447)
.+|.+|+...+..+...+.+...+ ..++++..+.+++++|++ +++++++++++.++++.|.+++++++||+|++
T Consensus 51 ivt~~di~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~- 124 (280)
T 3kh5_A 51 IITSMDIVDFMGGGSKYNLIREKH---ERNFLAAINEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDE- 124 (280)
T ss_dssp EEEHHHHHHHTTTSGGGHHHHTTS---TTCHHHHTTSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTT-
T ss_pred EEEHHHHHHHhcccchhhhhhhcc---ccchhHHhhhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCC-
Confidence 468899988876665555443322 233334446799999995 67799999999999999999999999999865
Q ss_pred CeEEEEEEhhhHHHHhHhCCCccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHH
Q psy2372 270 SKIIGTLNTKTLFKKIISNRSIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHS 348 (447)
Q Consensus 270 ~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~ 348 (447)
++++|+++.+|+++.+..... ...++.++| +++.++++++++.++++.|++++.+.+||+ ++|+++|+||.+|+++.
T Consensus 125 ~~~~Givt~~dl~~~~~~~~~-~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~dl~~~ 202 (280)
T 3kh5_A 125 NQLISLITERDVIRALLDKID-ENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTDFIKL 202 (280)
T ss_dssp CBEEEEEEHHHHHHHHGGGSC-TTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHHHHHH
T ss_pred CEEEEEEEHHHHHHHHhhcCC-CCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHHHHHH
Confidence 899999999999987654332 124789999 577899999999999999999999999999 67999999999999998
Q ss_pred Hhc
Q psy2372 349 LIG 351 (447)
Q Consensus 349 i~g 351 (447)
+..
T Consensus 203 ~~~ 205 (280)
T 3kh5_A 203 LGS 205 (280)
T ss_dssp HTS
T ss_pred Hhh
Confidence 864
No 61
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.65 E-value=6.6e-17 Score=169.04 Aligned_cols=148 Identities=14% Similarity=0.193 Sum_probs=116.6
Q ss_pred CCCCHHHHHHHHHhchhcCcc-----chHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEE
Q psy2372 189 DLITEEEIYKLFREGFDIGIF-----NKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFP 263 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g~l-----~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iP 263 (447)
..+|++++...+.....-|.+ .++|+++++++ .+++++|+ +++++++++++++|+++.|.+++++++|
T Consensus 52 dtVTe~~ma~a~a~~GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~--~d~v~v~~~~tv~ea~~~m~~~~~s~~P 124 (496)
T 4fxs_A 52 DTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVV--THPVTVRPEQTIADVMELTHYHGFAGFP 124 (496)
T ss_dssp TTTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHH-----HHCCC--C--BCCCCBCSSSBHHHHHHHHTSSCCCEEE
T ss_pred chhhHHHHHHHHHHcCCcceecCCCCHHHHHHHHHhc-----cccccccc--cCceEECCCCCHHHHHHHHHHcCCcEEE
Confidence 468999999998877666777 67888999887 34678898 5778999999999999999999999999
Q ss_pred EEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEE
Q psy2372 264 VYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGII 340 (447)
Q Consensus 264 V~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiV 340 (447)
|+|++ ++++|+|+.+|++.. .+. +.+++++|+ +++++++++++.++++.|++++.+.+||+|++|+++|+|
T Consensus 125 Vvd~~-~~lvGiVt~rDL~~~--~~~---~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~GiI 198 (496)
T 4fxs_A 125 VVTEN-NELVGIITGRDVRFV--TDL---TKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMI 198 (496)
T ss_dssp EECSS-SBEEEEEEHHHHTTC--CCT---TSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEEE
T ss_pred EEccC-CEEEEEEEHHHHhhc--ccC---CCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEee
Confidence 99965 899999999999742 112 268999998 689999999999999999999999999999999999999
Q ss_pred eHHHHHHHH
Q psy2372 341 TINDIIHSL 349 (447)
Q Consensus 341 T~~DIle~i 349 (447)
|++|+++..
T Consensus 199 T~~DIl~~~ 207 (496)
T 4fxs_A 199 TAKDFHKAE 207 (496)
T ss_dssp CCC-----C
T ss_pred hHhHHHHhh
Confidence 999999875
No 62
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.63 E-value=1.6e-15 Score=159.08 Aligned_cols=151 Identities=17% Similarity=0.208 Sum_probs=126.7
Q ss_pred CCCCHHHHHHHHHhchhcCccc-----hHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEE
Q psy2372 189 DLITEEEIYKLFREGFDIGIFN-----KIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFP 263 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g~l~-----~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iP 263 (447)
..+|++++...+.....-|.+. +++.+++++++. .++.|+ .+++++++++|+.|+++.|.+++++++|
T Consensus 76 dtvTe~~lAia~a~~GgiGvIh~~~~~~~q~~~V~~V~~-----~~~~m~--~d~v~l~~~~tv~ea~~~m~~~~~s~~p 148 (511)
T 3usb_A 76 DTVTEADMAIAMARQGGLGIIHKNMSIEQQAEQVDKVKR-----SESGVI--SDPFFLTPEHQVYDAEHLMGKYRISGVP 148 (511)
T ss_dssp TTTCSHHHHHHHHHHTCEEEECSSSCHHHHHHHHHHHHT-----SSSCSS--SSCCCBCTTSBHHHHHHHHHHHCCSEEE
T ss_pred hhhcHHHHHHHHHhcCCceeecccCCHHHHHHHHHHhhc-----cccccc--cCCEEECCCCCHHHHHHHHHHcCCcEEE
Confidence 4679999988877665556665 455566777765 446676 4677899999999999999999999999
Q ss_pred EEeCC-CCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC--CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEE
Q psy2372 264 VYKKS-ISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ--PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGII 340 (447)
Q Consensus 264 V~~~~-~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~--~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiV 340 (447)
|+|++ .++++|+|+.+|++.. ... +.+++++|+ +++++++++++.++++.|++++.+.+||+|++|+++|+|
T Consensus 149 Vvd~g~~~~lvGiVt~rDl~~~--~~~---~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~GiI 223 (511)
T 3usb_A 149 VVNNLDERKLVGIITNRDMRFI--QDY---SIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLI 223 (511)
T ss_dssp EESCTTTCBEEEEEEHHHHTTC--CCS---SSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEEE
T ss_pred EEecCCCCEEEEEEEehHhhhh--ccC---CCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeeec
Confidence 99861 4899999999999762 222 278999997 788999999999999999999999999999999999999
Q ss_pred eHHHHHHHHhc
Q psy2372 341 TINDIIHSLIG 351 (447)
Q Consensus 341 T~~DIle~i~g 351 (447)
|.+|+++.+..
T Consensus 224 T~~Dil~~~~~ 234 (511)
T 3usb_A 224 TIKDIEKVIEF 234 (511)
T ss_dssp EHHHHHHHHHC
T ss_pred cHHHHHHhhhc
Confidence 99999999864
No 63
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.63 E-value=6.1e-17 Score=174.47 Aligned_cols=126 Identities=16% Similarity=0.156 Sum_probs=107.2
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHH-hCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCc-----------
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKIL-DSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSI----------- 291 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~-~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~----------- 291 (447)
++++|+|+|+||+++.+++++++++|+.+.|. +++++++||+|++ ++++|+|+.+|+++.+.++...
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~~ 529 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTL 529 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC--------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccce
Confidence 67899999999999999999999999999999 8999999999864 8999999999999865432100
Q ss_pred ------------------------------------cCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCC
Q psy2372 292 ------------------------------------VNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYG 334 (447)
Q Consensus 292 ------------------------------------~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G 334 (447)
...+++++| +++.++++++++.++++.|++++.+.+||+ |+|
T Consensus 530 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~G 608 (632)
T 3org_A 530 VLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ERG 608 (632)
T ss_dssp -----------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ETT
T ss_pred eccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-ECC
Confidence 001267788 578899999999999999999999999999 789
Q ss_pred CEEEEEeHHHHHHHHhc
Q psy2372 335 ELEGIITINDIIHSLIG 351 (447)
Q Consensus 335 ~~iGiVT~~DIle~i~g 351 (447)
+++|+||++|+++++.+
T Consensus 609 ~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 609 KLVGIVEREDVAYGYSN 625 (632)
T ss_dssp EEEEEEEGGGTEECCCC
T ss_pred EEEEEEehhhHHHHHhh
Confidence 99999999999876544
No 64
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.62 E-value=1.9e-15 Score=158.19 Aligned_cols=151 Identities=13% Similarity=0.148 Sum_probs=131.8
Q ss_pred CCCCHHHHHHHHHhchhcCccc-----hHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEE
Q psy2372 189 DLITEEEIYKLFREGFDIGIFN-----KIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFP 263 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g~l~-----~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iP 263 (447)
..+|++|+...+..+...|.+. +++++++++++++ +++|++ +++++++++++.++++.|.+++++++|
T Consensus 53 ~~vt~~eLa~av~~~Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~p 125 (491)
T 1zfj_A 53 DTVTGSKMAIAIARAGGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVSEAEELMQRYRISGVP 125 (491)
T ss_dssp TTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEE
T ss_pred hhccHHHHHHHHHHcCCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEE
Confidence 3578899999998887777776 7888889887765 679985 677899999999999999999999999
Q ss_pred EEeC-CCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC--CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEE
Q psy2372 264 VYKK-SISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ--PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGII 340 (447)
Q Consensus 264 V~~~-~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~--~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiV 340 (447)
|+|+ +.++++|+|+.+|++... +. +.+++++|+ ++.++++++++.++++.|++++.+.+||+|++|+++|+|
T Consensus 126 Vvd~~~~~~lvGivt~~Dl~~~~--~~---~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGiv 200 (491)
T 1zfj_A 126 IVETLANRKLVGIITNRDMRFIS--DY---NAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLI 200 (491)
T ss_dssp EESCTTTCBEEEEEEHHHHHHCS--CS---SSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEE
T ss_pred EEEeCCCCEEEEEEEHHHHhhhc--cC---CCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 9982 348999999999998642 22 268999997 678999999999999999999999999999999999999
Q ss_pred eHHHHHHHHhc
Q psy2372 341 TINDIIHSLIG 351 (447)
Q Consensus 341 T~~DIle~i~g 351 (447)
|.+|+++.+..
T Consensus 201 t~~Dil~~~~~ 211 (491)
T 1zfj_A 201 TIKDIEKVIEF 211 (491)
T ss_dssp EHHHHHHHHHC
T ss_pred EHHHHHHHHhc
Confidence 99999999864
No 65
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.61 E-value=4.4e-15 Score=142.57 Aligned_cols=125 Identities=17% Similarity=0.302 Sum_probs=105.9
Q ss_pred eece-eeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCC--------------c
Q psy2372 227 CAIT-LMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRS--------------I 291 (447)
Q Consensus 227 ~V~d-vM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~--------------~ 291 (447)
++.+ +|+ ++++++++++|+.+|++.|.+++++++||++++.++++|+++.+|+++.+..+.. .
T Consensus 4 ~v~~~i~~--~~~~~v~~~~sl~~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~ 81 (280)
T 3kh5_A 4 RVMKIAQN--KKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAA 81 (280)
T ss_dssp BGGGTSCC--SCCCCBCTTSBHHHHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHH
T ss_pred hHHHHhcC--CCcEEECCCCcHHHHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHH
Confidence 4455 455 3788999999999999999999999999998645899999999999987532110 0
Q ss_pred cCCChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 292 VNIDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 292 ~~~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
.+.+++++|+ ++.++++++++.++++.|++++.+.+||+|++|+++|++|.+|+++.+.+..
T Consensus 82 ~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~ 144 (280)
T 3kh5_A 82 INEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKI 144 (280)
T ss_dssp TTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGGS
T ss_pred hhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhcC
Confidence 1257899995 6789999999999999999999999999999999999999999999877654
No 66
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=3.6e-15 Score=138.97 Aligned_cols=120 Identities=17% Similarity=0.273 Sum_probs=106.5
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC-CC
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ-PP 303 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~-~~ 303 (447)
..+++++|+ ++++++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+++... . .+++++|. ++
T Consensus 12 ~~~~~~~~~--~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~---~---~~v~~im~~~~ 82 (213)
T 1vr9_A 12 HMKVKKWVT--QDFPMVEESATVRECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL---D---SSVFNKVSLPD 82 (213)
T ss_dssp -CBGGGGCB--SCSCEEETTCBHHHHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT---T---SBSGGGCBCTT
T ss_pred ccCHHHhhc--CCCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC---C---CcHHHHccCCC
Confidence 356889998 467799999999999999999999999999854 89999999999987653 1 57999995 67
Q ss_pred eeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 304 LFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 304 ~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+....
T Consensus 83 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~~~ 132 (213)
T 1vr9_A 83 FFVHEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIEAL 132 (213)
T ss_dssp CCEETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHHSC
T ss_pred EEECCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHHHh
Confidence 89999999999999999999999999998899999999999999887543
No 67
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.61 E-value=2.7e-15 Score=147.81 Aligned_cols=128 Identities=11% Similarity=0.191 Sum_probs=111.7
Q ss_pred ccCceeecee---eeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-CccCCChh
Q psy2372 222 KLDDQCAITL---MTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-SIVNIDIT 297 (447)
Q Consensus 222 ~l~~~~V~dv---M~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-~~~~~~v~ 297 (447)
.+.+.+++++ |+ +++.++++++++.++.+.|.+++++++||+|++ |+++|+++.+|+++.+..+. .....++.
T Consensus 183 ~~~~~~v~~~~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~ 259 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQ--DNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 259 (323)
T ss_dssp GGCCSBGGGTTCSBC--TTCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBHH
T ss_pred hhhhCcHHHcCCCCC--CCcEEECCCCcHHHHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCHH
Confidence 3456689999 76 467799999999999999999999999999864 89999999999998775432 11136799
Q ss_pred hhcC-------CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 298 SAIQ-------PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 298 ~im~-------~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.++++
T Consensus 260 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 260 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 9995 478999999999999999999999999999999999999999999999875
No 68
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.60 E-value=1.7e-15 Score=145.90 Aligned_cols=149 Identities=17% Similarity=0.149 Sum_probs=105.2
Q ss_pred eeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCC-Ce
Q psy2372 226 QCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQP-PL 304 (447)
Q Consensus 226 ~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~-~~ 304 (447)
++|+++|++ +++++++++++.++++.|.+++++++||+|+ .|+++|+++.+|+++...+ .+++++|.+ +.
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~-~~~~~Giv~~~dl~~~~~~------~~v~~~m~~~~~ 71 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRNYALELFKKYKVRSFPVVNK-EGKLVGIISVKRILVNPDE------EQLAMLVKRDVP 71 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC------------CCEEEEECT-TCCEEEEEESSCC----------------CCCBSCCC
T ss_pred CchHHhccC--CCeEECCCCcHHHHHHHHHHcCCCeEEEEcC-CCcEEEEEEHHHHHhhhcc------CCHHHHcCCCCc
Confidence 468899984 6778999999999999999999999999986 4899999999999876532 578999964 78
Q ss_pred eeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHH-HHhcc-c-ccccccceEEecCCeEEEeccCCHHHHH
Q psy2372 305 FIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIH-SLIGD-I-SNSYQEEIEFCEDGSWIISASMTFDRFK 381 (447)
Q Consensus 305 ~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle-~i~ge-i-~e~~~~~~~~~~~~~~~v~g~~~i~~~~ 381 (447)
++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++ .+.++ . .+..-..+. ..+.+.+++..++.++.
T Consensus 72 ~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m--~~~~~~v~~~~~l~~~~ 149 (282)
T 2yzq_A 72 VVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIEPYY--QRYVSIVWEGTPLKAAL 149 (282)
T ss_dssp EEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTS--BSCCCCEETTSBHHHHH
T ss_pred EECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhccCCcccCcHHHHh--CCCCEEECCCCCHHHHH
Confidence 9999999999999999999999999999899999999999999 66543 2 111111111 35567899999999988
Q ss_pred HHhC
Q psy2372 382 ELLS 385 (447)
Q Consensus 382 ~~l~ 385 (447)
+.+.
T Consensus 150 ~~~~ 153 (282)
T 2yzq_A 150 KALL 153 (282)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 69
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.59 E-value=1.5e-16 Score=166.47 Aligned_cols=167 Identities=20% Similarity=0.305 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHHHhchhcCccc-----hHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEE
Q psy2372 189 DLITEEEIYKLFREGFDIGIFN-----KIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFP 263 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g~l~-----~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iP 263 (447)
..+|++|+...+..+...|.+. +++++++++++++++ .|+ .+++++++++++.++++.|.+++++++|
T Consensus 56 ~~vt~~ela~ava~~GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~--~~~~~v~~~~tv~ea~~~~~~~~~~~~p 128 (486)
T 2cu0_A 56 DTVTEWEMAVAMAREGGLGVIHRNMGIEEQVEQVKRVKRAER-----LIV--EDVITIAPDETVDFALFLMEKHGIDGLP 128 (486)
T ss_dssp TTTCSHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHTCC---------------------------------------
T ss_pred eeecHHHHHHHHHhcCCceeecCCCCHHHHHHHHHhhcchhh-----ccc--cCceEECCCCCHHHHHHHHHHcCCcEEE
Confidence 3578899998887766556665 577899999888654 687 5788999999999999999999999999
Q ss_pred EEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeH
Q psy2372 264 VYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITI 342 (447)
Q Consensus 264 V~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~ 342 (447)
|+++ ++++|+|+.+|++. + .. .+++++|+ ++.++++++++.++++.|++++.+.+||+|++|+++|+||.
T Consensus 129 Vvd~--~~lvGivt~~Dl~~---~-~~---~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~ 199 (486)
T 2cu0_A 129 VVED--EKVVGIITKKDIAA---R-EG---KLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITM 199 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEC--CEEEEEEEHHHhcc---C-CC---CCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEH
Confidence 9985 89999999999986 1 22 67999996 67899999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccccceEEecCCeEEEeccCCHH
Q psy2372 343 NDIIHSLIGDISNSYQEEIEFCEDGSWIISASMTFD 378 (447)
Q Consensus 343 ~DIle~i~gei~e~~~~~~~~~~~~~~~v~g~~~i~ 378 (447)
+|+++.+-. +...+..++.|++.|.++++
T Consensus 200 ~Dil~~~~~-------~~~~~~~~g~~~v~~~~~~~ 228 (486)
T 2cu0_A 200 SDLVARKKY-------KNAVRDENGELLVAAAVSPF 228 (486)
T ss_dssp -------CC-------TTCCBCTTSCBCCEEEECTT
T ss_pred HHHHHhhhc-------cccccccCCceeecceechh
Confidence 999998521 11223356778888888763
No 70
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.59 E-value=3.8e-15 Score=144.89 Aligned_cols=128 Identities=16% Similarity=0.212 Sum_probs=111.5
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC------CccCCCh
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR------SIVNIDI 296 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~------~~~~~~v 296 (447)
..+.+++++|++ ++.++++++++.++++.|.+++++++||+|++ ++++|+++.+|+++.+.+.. .....++
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~v 229 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKVV 229 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCBH
T ss_pred cccccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcCH
Confidence 345689999984 66789999999999999999999999999855 89999999999998765210 0012679
Q ss_pred hhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 297 TSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 297 ~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
.++|. ++.++++++++.++++.|.+++.+.+||+|++|+++|+||+.|+++.+.++.
T Consensus 230 ~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~~ 287 (296)
T 3ddj_A 230 KDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHIL 287 (296)
T ss_dssp HHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHH
T ss_pred HHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHHh
Confidence 99995 6789999999999999999999999999999999999999999999998876
No 71
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.58 E-value=5.2e-15 Score=140.48 Aligned_cols=122 Identities=13% Similarity=0.148 Sum_probs=100.6
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCC--------------
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRS-------------- 290 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~-------------- 290 (447)
..+|+++|++ ++.++++++++.+|++.|.+++++.+||+|++ |+++|+++.+|+++.......
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~v 82 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDNI 82 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHHH
Confidence 4689999984 56799999999999999999999999999865 899999999999987642110
Q ss_pred --------------------------------------------------------------------------------
Q psy2372 291 -------------------------------------------------------------------------------- 290 (447)
Q Consensus 291 -------------------------------------------------------------------------------- 290 (447)
T Consensus 83 ~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~~ 162 (245)
T 3l2b_A 83 LDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAKK 162 (245)
T ss_dssp HHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHHH
T ss_pred HHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHHH
Confidence
Q ss_pred -------------------ccCCChhhhcC--CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHH
Q psy2372 291 -------------------IVNIDITSAIQ--PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSL 349 (447)
Q Consensus 291 -------------------~~~~~v~~im~--~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i 349 (447)
....+++++|. ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+++..
T Consensus 163 ~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 163 NNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLISTH 242 (245)
T ss_dssp HTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC------
T ss_pred cCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhchh
Confidence 00245788895 678999999999999999999999999999999999999999998753
No 72
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.57 E-value=1.3e-14 Score=138.63 Aligned_cols=127 Identities=17% Similarity=0.255 Sum_probs=104.3
Q ss_pred ccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCC-CCeEEEEEEhhhHHHHhHhC----CC------
Q psy2372 222 KLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKS-ISKIIGTLNTKTLFKKIISN----RS------ 290 (447)
Q Consensus 222 ~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~-~~~ivGiv~~~DLl~~~~~~----~~------ 290 (447)
...+++|+|+|+ ++++++.+++++.++.++|.+++++.+||+|++ .++++|+|+.+||++++... ..
T Consensus 9 ~~~~~~v~diMt--~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~~ 86 (250)
T 2d4z_A 9 NKYNIQVGDIMV--RDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAAA 86 (250)
T ss_dssp CCSSCBTTSSSB--SSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCCC
T ss_pred ccCCCChHHhcC--CCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhhh
Confidence 356789999998 478899999999999999999999999999864 36899999999999764321 00
Q ss_pred -------------------c------------------------------------------------------------
Q psy2372 291 -------------------I------------------------------------------------------------ 291 (447)
Q Consensus 291 -------------------~------------------------------------------------------------ 291 (447)
.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (250)
T 2d4z_A 87 EADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVASR 166 (250)
T ss_dssp CBCCC---------------------------------------------------------------------------
T ss_pred cccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCcc
Confidence 0
Q ss_pred -----------------cCCCh--hh-hc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHh
Q psy2372 292 -----------------VNIDI--TS-AI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLI 350 (447)
Q Consensus 292 -----------------~~~~v--~~-im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ 350 (447)
...++ ++ +| ..|++|.+++++.++..+|++.+.+.++|++ .|+++||||+.|+++++.
T Consensus 167 ~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 167 FEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAIE 245 (250)
T ss_dssp CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 00111 22 35 4578899999999999999999999999997 599999999999999987
Q ss_pred c
Q psy2372 351 G 351 (447)
Q Consensus 351 g 351 (447)
|
T Consensus 246 ~ 246 (250)
T 2d4z_A 246 G 246 (250)
T ss_dssp C
T ss_pred H
Confidence 6
No 73
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.56 E-value=5.2e-16 Score=162.83 Aligned_cols=153 Identities=10% Similarity=0.087 Sum_probs=24.7
Q ss_pred CCCCHHHHHHHHHhchhcCccc-----hHHHHHHhhhcccCceeecee-eeeCCceEEEcCCCCHHHHHHHHHhCCCcEE
Q psy2372 189 DLITEEEIYKLFREGFDIGIFN-----KIEYNLASRALKLDDQCAITL-MTPRMKVNFINIDDNIEKNLIKILDSSYNYF 262 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g~l~-----~~E~~~i~~~l~l~~~~V~dv-M~pr~~v~~v~~~~tl~e~~~~~~~~~~s~i 262 (447)
..++++++...+......|.+. +++++++.++... ++ |+| +++++++++|+.|+++.|.+++++++
T Consensus 60 ~~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~~------e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~ 131 (503)
T 1me8_A 60 QSVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNF------KAGFVV--SDSNVKPDQTFADVLAISQRTTHNTV 131 (503)
T ss_dssp TTTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHTT------TC--------------------------------
T ss_pred hhhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhhc------ccCccc--CCeEECCCCcHHHHHHHHHHcCceEE
Confidence 3578899988887655444443 4667777766543 44 885 78899999999999999999999999
Q ss_pred EEEeCC--CCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCC---CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEE
Q psy2372 263 PVYKKS--ISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQP---PLFIPETISTMQLLETFKKNKSELSLVIDEYGELE 337 (447)
Q Consensus 263 PV~~~~--~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~---~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~i 337 (447)
||+|++ .++++|+|+.+|+++. .... +.+++++|++ +.++++++++.++++.|++++.+.+||+|++|+++
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~~~-~~~~---~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lv 207 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYPID-LTQT---ETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLR 207 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHHhh-hccc---cCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEE
Confidence 999853 3799999999999864 1112 2679999975 88999999999999999999999999999999999
Q ss_pred EEEeHHHHHHHHhccc
Q psy2372 338 GIITINDIIHSLIGDI 353 (447)
Q Consensus 338 GiVT~~DIle~i~gei 353 (447)
|+||.+|+++.+.+..
T Consensus 208 GiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 208 YIVFRKDYDRSQVCHN 223 (503)
T ss_dssp --------------CC
T ss_pred EEEEecHHHHhhhccc
Confidence 9999999999987654
No 74
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.56 E-value=6.2e-15 Score=155.68 Aligned_cols=126 Identities=14% Similarity=0.166 Sum_probs=108.8
Q ss_pred cCceeeceeeeeCCceEEEcCC-CCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc-
Q psy2372 223 LDDQCAITLMTPRMKVNFINID-DNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI- 300 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~-~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im- 300 (447)
+.+.+|+++|++ ++++++++ +++.++++.|.+++++++||+|++.++++|+|+.+|+++.+..+......++.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im~ 458 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKALN 458 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGEE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHhc
Confidence 557899999984 67789999 99999999999999999999983348999999999999887654333347899999
Q ss_pred CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcC----CCCEEEEEeHHHHHHHHhcc
Q psy2372 301 QPPLFIPETISTMQLLETFKKNKSELSLVIDE----YGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 301 ~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe----~G~~iGiVT~~DIle~i~ge 352 (447)
++++++++++++.++++.|.+++ ++||+|+ +|+++||||++||++.+...
T Consensus 459 ~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~ 512 (527)
T 3pc3_A 459 KRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAAG 512 (527)
T ss_dssp TTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHTC
T ss_pred CCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHhc
Confidence 67889999999999999997654 5799998 49999999999999999764
No 75
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.54 E-value=3.9e-14 Score=140.10 Aligned_cols=127 Identities=13% Similarity=0.182 Sum_probs=110.1
Q ss_pred Cceeece---eeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-CccCCChhhh
Q psy2372 224 DDQCAIT---LMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-SIVNIDITSA 299 (447)
Q Consensus 224 ~~~~V~d---vM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-~~~~~~v~~i 299 (447)
...++++ +|+ +++.++++++++.++++.|.+++++++||+|++ ++++|+++.+|+++.+..+. .....++.++
T Consensus 180 ~~~~v~~l~~~m~--~~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~~ 256 (334)
T 2qrd_G 180 LRVPLNQMTIGTW--SNLATASMETKVYDVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGEA 256 (334)
T ss_dssp CCCBGGGSSCSBC--SSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHHH
T ss_pred hhCcHHHhCCccc--CCceEECCCCcHHHHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHHH
Confidence 3567888 477 467789999999999999999999999999854 89999999999998775432 1123678999
Q ss_pred cC-------CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 300 IQ-------PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 300 m~-------~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
|. ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.++.
T Consensus 257 m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 257 LLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp HTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCC
T ss_pred HhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcc
Confidence 96 6789999999999999999999999999999999999999999999998754
No 76
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.54 E-value=9.8e-16 Score=160.02 Aligned_cols=147 Identities=19% Similarity=0.212 Sum_probs=27.8
Q ss_pred CCCCHHHHHHHHHhchhcCccc-----hHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEE
Q psy2372 189 DLITEEEIYKLFREGFDIGIFN-----KIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFP 263 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g~l~-----~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iP 263 (447)
..+|++++...+.....-|.+. +++++++.++. +++++|+ .+++++++++|+.|+++.|.+++++++|
T Consensus 51 ~tVTe~~lA~ala~~GGiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~--~~~v~v~~~~tv~ea~~~m~~~~~s~~p 123 (490)
T 4avf_A 51 DTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVK-----KHETAIV--RDPVTVTPSTKIIELLQMAREYGFSGFP 123 (490)
T ss_dssp TTTCSHHHHHHHHHHTSEEEECCSSCHHHHHHHHHHHH-----HCCC---------------------------------
T ss_pred hhhCHHHHHHHHHHcCCCccccCCCCHHHHHHHhhhhc-----ccccCcc--cCceEeCCCCcHHHHHHHHHHhCCCEEE
Confidence 4589999998888776667666 67777887764 4678898 4678999999999999999999999999
Q ss_pred EEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEE
Q psy2372 264 VYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGII 340 (447)
Q Consensus 264 V~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiV 340 (447)
|+| + ++++|+|+.+|++... ... .+++++|+ ++.++++++++.++++.|++++.+.+||+|++|+++|+|
T Consensus 124 Vvd-~-g~lvGIVt~rDl~~~~--~~~---~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiI 196 (490)
T 4avf_A 124 VVE-Q-GELVGIVTGRDLRVKP--NAG---DTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLV 196 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEE-C-CEEEEEEEhHHhhhcc--ccC---CcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 998 4 8999999999997432 122 67999998 689999999999999999999999999999999999999
Q ss_pred eHHHHHHHH
Q psy2372 341 TINDIIHSL 349 (447)
Q Consensus 341 T~~DIle~i 349 (447)
|++|+++..
T Consensus 197 T~~Dil~~~ 205 (490)
T 4avf_A 197 TFRDIEKAK 205 (490)
T ss_dssp ---------
T ss_pred ehHHhhhhc
Confidence 999999975
No 77
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.51 E-value=5e-14 Score=135.60 Aligned_cols=125 Identities=16% Similarity=0.210 Sum_probs=104.6
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHH------HHhH------hC---
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLF------KKII------SN--- 288 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl------~~~~------~~--- 288 (447)
.+.+++++|+ .++.++++++++.++.+.|.+++++.+||+|++ ++++|+++.+|++ +... .+
T Consensus 124 ~~~~v~~~m~--~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~~ 200 (282)
T 2yzq_A 124 KGVEIEPYYQ--RYVSIVWEGTPLKAALKALLLSNSMALPVVDSE-GNLVGIVDETDLLRDSEIVRIMKSTELAASSEEE 200 (282)
T ss_dssp GGCBSTTTSB--SCCCCEETTSBHHHHHHHHHTCSSSEEEEECTT-SCEEEEEEGGGGGGCGGGCC--------------
T ss_pred ccCcHHHHhC--CCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhhh
Confidence 3678999997 466789999999999999999999999999854 7999999999999 4431 00
Q ss_pred ---------------CCccCCChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 289 ---------------RSIVNIDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 289 ---------------~~~~~~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
......+++++| +++.++++++++.+|++.|.+++.+.+||+|+.|+++|+||..|+++.+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 201 WILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp ------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred hhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 011236789999 567899999999999999999999999999988899999999999987653
No 78
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.49 E-value=2.6e-13 Score=134.04 Aligned_cols=125 Identities=13% Similarity=0.218 Sum_probs=106.3
Q ss_pred eeecee--eeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCC-CccCCChhhhc--
Q psy2372 226 QCAITL--MTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNR-SIVNIDITSAI-- 300 (447)
Q Consensus 226 ~~V~dv--M~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~-~~~~~~v~~im-- 300 (447)
.+++++ |+ ..++.++++++++.++.+.|.+++++++||+|++ ++++|+++.+|+++....+. .....++.++|
T Consensus 190 ~~v~~~~v~~-~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~~ 267 (330)
T 2v8q_E 190 KSLEELQIGT-YANIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQH 267 (330)
T ss_dssp SBHHHHTCSB-CSSCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGGG
T ss_pred CCHHHhcccC-cCCceEECCCCCHHHHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHHhc
Confidence 345555 43 2467789999999999999999999999999854 89999999999998775431 11136788888
Q ss_pred -----CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 301 -----QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 301 -----~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
+++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+..+
T Consensus 268 ~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 268 RSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp CCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSS
T ss_pred cccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhh
Confidence 5788999999999999999999999999999999999999999999998754
No 79
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.29 E-value=3.9e-13 Score=140.77 Aligned_cols=128 Identities=16% Similarity=0.192 Sum_probs=12.6
Q ss_pred HHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCcc
Q psy2372 213 EYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIV 292 (447)
Q Consensus 213 E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~ 292 (447)
+++.+.++.+ ++++|++ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+++.. +.
T Consensus 87 ~~~~v~~v~~-----~~~iM~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~--~~--- 153 (494)
T 1vrd_A 87 QARQVSIVKK-----TENGIIY--DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK--NL--- 153 (494)
T ss_dssp HHHHHHHHHT-----C----------------------------------------------------------------
T ss_pred HHHHHHhhhh-----HhhcCcc--CCeEECCCCCHHHHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc--CC---
Confidence 3455555544 5778984 77899999999999999999999999999854 7999999999998632 12
Q ss_pred CCChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc
Q psy2372 293 NIDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 293 ~~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei 353 (447)
+.++.++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+..+.
T Consensus 154 ~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~~ 217 (494)
T 1vrd_A 154 SKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHPN 217 (494)
T ss_dssp -------------------------------------------------------CHHHHTCTT
T ss_pred CCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhcccc
Confidence 267999996 6789999999999999999999999999999999999999999999987653
No 80
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.17 E-value=4e-12 Score=130.86 Aligned_cols=146 Identities=14% Similarity=0.206 Sum_probs=19.9
Q ss_pred CCCCHHHHHHHHHhchhcC--ccc-----hHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcE
Q psy2372 189 DLITEEEIYKLFREGFDIG--IFN-----KIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNY 261 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~g--~l~-----~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~ 261 (447)
..+|+.++- +..+++.| +|. ++|.++++++-+++. .|. .+.+++.++.|+.|+.+++.+++++.
T Consensus 101 DTVTe~~MA--IamAr~GGiGvIH~n~sie~Qa~~V~~VKr~e~-----g~i--~dPvtl~P~~Tv~da~~l~~~~~isg 171 (556)
T 4af0_A 101 DTVTEDRMA--IALALHGGLGIIHHNCSAEEQAAMVRRVKKYEN-----GFI--TDPLCLGPDATVGDVLEIKAKFGFCG 171 (556)
T ss_dssp TTTCSHHHH--HHHHHTTCEEEECCSSCHHHHHHHHHHHHHCCC------------------------------------
T ss_pred ccccCHHHH--HHHHHCCCeEEEcCCCCHHHHHHHHHHHHhccc-----Ccc--CCCeEcCCCCCHHHHHHHHHHhCCCc
Confidence 356666654 44444443 343 456678888776654 344 35678999999999999999999999
Q ss_pred EEEEeCC--CCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEE
Q psy2372 262 FPVYKKS--ISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEG 338 (447)
Q Consensus 262 iPV~~~~--~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iG 338 (447)
+||+++. .++++|||+.+|+... +.. .+++++|+ ++++++++.++.+|.++|++++...+||||++|+++|
T Consensus 172 vpVvd~g~~~~kLvGIvT~RD~rf~---d~~---~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvG 245 (556)
T 4af0_A 172 VPITETGEPDSKLLGIVTGRDVQFQ---DAE---TPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVS 245 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccCcCCEEEEEEeccccccc---ccc---eEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEE
Confidence 9999852 4799999999998752 222 68999995 5679999999999999999999999999999999999
Q ss_pred EEeHHHHHHHH
Q psy2372 339 IITINDIIHSL 349 (447)
Q Consensus 339 iVT~~DIle~i 349 (447)
+||+.|+...-
T Consensus 246 lIT~kDi~k~~ 256 (556)
T 4af0_A 246 LVARSDLLKNQ 256 (556)
T ss_dssp -----------
T ss_pred EEEechhhhhh
Confidence 99999998754
No 81
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.15 E-value=7.1e-13 Score=139.47 Aligned_cols=119 Identities=11% Similarity=0.153 Sum_probs=69.1
Q ss_pred eeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCC--CCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC---
Q psy2372 227 CAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKS--ISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ--- 301 (447)
Q Consensus 227 ~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~--~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~--- 301 (447)
+++++|++ +++++++++++.++++.|.+++++.+||+|++ .++++|+|+.+|++....... ..+++++|+
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~---~~~v~~vm~~~~ 183 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDH---TTLLSEVMTPRI 183 (514)
T ss_dssp TCCTTSCS--SCCCCCC-----------------CEESCC--------CCEECTTTTC-------------------CCB
T ss_pred hhhhcccc--CCEEECCCCCHHHHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccC---CCCHHHHhCCCC
Confidence 57788984 56689999999999999999999999999863 489999999999987421112 267999995
Q ss_pred CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHh
Q psy2372 302 PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLI 350 (447)
Q Consensus 302 ~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ 350 (447)
++.++++++++.++++.|.+++.+.+||+|++|+++|+||++|+++.+.
T Consensus 184 ~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 184 ELVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRD 232 (514)
T ss_dssp CCCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCC
T ss_pred CCeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhh
Confidence 5889999999999999999999999999999999999999999987654
No 82
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.78 E-value=2.8e-09 Score=98.84 Aligned_cols=138 Identities=13% Similarity=0.139 Sum_probs=70.6
Q ss_pred CCCHHHHHHHHHhchhcCccchHHHHHHhhhcccC-------ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEE
Q psy2372 190 LITEEEIYKLFREGFDIGIFNKIEYNLASRALKLD-------DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYF 262 (447)
Q Consensus 190 ~~s~~el~~lv~~~~~~g~l~~~E~~~i~~~l~l~-------~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~i 262 (447)
..|-+|...++.+....+..--++...+.+++... +.+++++|++ ++.++++++++.++.+.|.+++++++
T Consensus 29 ~~tv~ea~~~m~~~~~~~~pVvd~~~~l~Givt~~dl~~~~~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~l 106 (213)
T 1vr9_A 29 SATVRECLHRMRQYQTNECIVKDREGHFRGVVNKEDLLDLDLDSSVFNKVSL--PDFFVHEEDNITHALLLFLEHQEPYL 106 (213)
T ss_dssp TCBHHHHHHHHHHTTSSEEEEECTTSBEEEEEEGGGGTTSCTTSBSGGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEE
T ss_pred CCcHHHHHHHHHHCCCCEEEEEcCCCEEEEEEEHHHHHhhcCCCcHHHHccC--CCEEECCCCcHHHHHHHHHHhCCCEE
Confidence 45677888887765443321111112233333333 3469999986 56789999999999999999999999
Q ss_pred EEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCCCe--eeCCCCCHHHHHHHHHHcCCceEEEEcCCCC
Q psy2372 263 PVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPPL--FIPETISTMQLLETFKKNKSELSLVIDEYGE 335 (447)
Q Consensus 263 PV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~~~--~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~ 335 (447)
||+|++ ++++|+++.+|+++...... ...+.+.... +.....++.++.+.|.+++.+.++|.+.+|.
T Consensus 107 pVvd~~-g~lvGiit~~Dil~~~~~~~-----~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 107 PVVDEE-MRLKGAVSLHDFLEALIEAL-----AMDVPGIRFSVLLEDKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp EEECTT-CBEEEEEEHHHHHHHHHHSC-----C------------------------------------------
T ss_pred EEEcCC-CEEEEEEEHHHHHHHHHHHh-----cCCCCcEEEEEEeCCCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 999864 89999999999998775422 1233332211 1133345999999999999999998865544
No 83
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.78 E-value=2e-08 Score=76.41 Aligned_cols=67 Identities=10% Similarity=0.281 Sum_probs=54.7
Q ss_pred eEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh-CCCccCCChhhhcC-CCeee
Q psy2372 238 VNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS-NRSIVNIDITSAIQ-PPLFI 306 (447)
Q Consensus 238 v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~-~~~~~~~~v~~im~-~~~~V 306 (447)
++++++++|+.||++.|.+++++.+||+|+ |+++|+++.+|+++.... +....+.+++++|+ ++.+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 578999999999999999999999999983 799999999999876543 33333468999994 55543
No 84
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.62 E-value=1.2e-07 Score=71.15 Aligned_cols=63 Identities=8% Similarity=0.226 Sum_probs=52.8
Q ss_pred eEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCC-ccCCChhhhcCC
Q psy2372 238 VNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRS-IVNIDITSAIQP 302 (447)
Q Consensus 238 v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~-~~~~~v~~im~~ 302 (447)
++++++++++.++++.|.+++++.+||+|+ ++++|+++.+|+++....... ....+++++|++
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~ 65 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTK 65 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEE
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCC
Confidence 568999999999999999999999999984 899999999999998654321 223679999954
No 85
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.52 E-value=2.9e-07 Score=80.68 Aligned_cols=91 Identities=16% Similarity=0.153 Sum_probs=70.4
Q ss_pred CChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-ccc-cccceEEecCCeEEE
Q psy2372 294 IDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-SNS-YQEEIEFCEDGSWII 371 (447)
Q Consensus 294 ~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~e~-~~~~~~~~~~~~~~v 371 (447)
.+++++|+++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++..+.++- ..+ .-..+.....+.+.+
T Consensus 17 ~~v~~im~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~~~~~v 96 (159)
T 3fv6_A 17 LQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDRDAVLVGVLSRKDLLRASIGQQELTSVPVHIIMTRMPNITVC 96 (159)
T ss_dssp CBGGGSCBCCCEEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSEETTSCCCB
T ss_pred CCHHHHcCCCEEECCCCcHHHHHHHHHHCCCCEEEEEcCCCcEEEEEeHHHHHHHhhccCcccCcCHHHHHcCCCCcEEE
Confidence 679999988889999999999999999999999999998899999999999999886643 221 111222222234567
Q ss_pred eccCCHHHHHHHh
Q psy2372 372 SASMTFDRFKELL 384 (447)
Q Consensus 372 ~g~~~i~~~~~~l 384 (447)
+...++.++.+.+
T Consensus 97 ~~~~~l~~a~~~m 109 (159)
T 3fv6_A 97 RREDYVMDIAKHL 109 (159)
T ss_dssp CTTSBHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 7788888876554
No 86
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.36 E-value=3.5e-07 Score=81.14 Aligned_cols=57 Identities=25% Similarity=0.370 Sum_probs=52.6
Q ss_pred CChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHh
Q psy2372 294 IDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLI 350 (447)
Q Consensus 294 ~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ 350 (447)
.+++++| +++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++..+.
T Consensus 18 ~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~ 75 (170)
T 4esy_A 18 VPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSI 75 (170)
T ss_dssp SBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTC
T ss_pred CCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHh
Confidence 6899999 56789999999999999999999999999999999999999999987654
No 87
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.30 E-value=1.4e-06 Score=72.21 Aligned_cols=86 Identities=22% Similarity=0.262 Sum_probs=65.4
Q ss_pred ChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcccccccccceEEecCCeEEEec
Q psy2372 295 DITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSWIISA 373 (447)
Q Consensus 295 ~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~~~v~g 373 (447)
+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+......-.+ +. ..+...++.
T Consensus 2 ~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~~~~~~~~v~~--~~--~~~~~~v~~ 77 (122)
T 3kpb_A 2 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNKKTIEE--IM--TRNVITAHE 77 (122)
T ss_dssp BHHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECTTSBEEEEECHHHHHHHHHTTCCBGGG--TS--BSSCCCEET
T ss_pred chHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECCCCCEEEEEEHHHHHHHHHhcccCHHH--Hh--cCCCeEECC
Confidence 5788995 577999999999999999999999999999999999999999999987653210000 00 123345777
Q ss_pred cCCHHHHHHHh
Q psy2372 374 SMTFDRFKELL 384 (447)
Q Consensus 374 ~~~i~~~~~~l 384 (447)
..++.+..+.+
T Consensus 78 ~~~l~~~~~~~ 88 (122)
T 3kpb_A 78 DEPVDHVAIKM 88 (122)
T ss_dssp TSBHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 78888865544
No 88
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.29 E-value=1.6e-06 Score=74.73 Aligned_cols=91 Identities=14% Similarity=0.127 Sum_probs=69.4
Q ss_pred CChhhhcCC---CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc--cc-c-cccceEE-ec
Q psy2372 294 IDITSAIQP---PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI--SN-S-YQEEIEF-CE 365 (447)
Q Consensus 294 ~~v~~im~~---~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei--~e-~-~~~~~~~-~~ 365 (447)
.+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+.+.- +. . ....+.. ..
T Consensus 15 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~ 94 (150)
T 3lqn_A 15 IFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGILGLERIEFERLEEMKVEQVMK 94 (150)
T ss_dssp CBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHTBCSSSBCGGGGGGCBGGGTCB
T ss_pred CChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCCCCEEEEEEHHHHHHHHHhhcccchhHHhcCCHHHHhc
Confidence 679999963 789999999999999999999999999999999999999999999986422 11 1 1111110 12
Q ss_pred CCeEEEeccCCHHHHHHHh
Q psy2372 366 DGSWIISASMTFDRFKELL 384 (447)
Q Consensus 366 ~~~~~v~g~~~i~~~~~~l 384 (447)
.....++...++.++.+.+
T Consensus 95 ~~~~~v~~~~~l~~a~~~~ 113 (150)
T 3lqn_A 95 QDIPVLKLEDSFAKALEMT 113 (150)
T ss_dssp SSCCEEETTCBHHHHHHHH
T ss_pred CCCceeCCCCCHHHHHHHH
Confidence 3456788888888876655
No 89
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.29 E-value=3.9e-06 Score=71.18 Aligned_cols=89 Identities=16% Similarity=0.143 Sum_probs=65.9
Q ss_pred CChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc-c-ccccccceEEecCCeEE
Q psy2372 294 IDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD-I-SNSYQEEIEFCEDGSWI 370 (447)
Q Consensus 294 ~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge-i-~e~~~~~~~~~~~~~~~ 370 (447)
.+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++...+.+ . .+..-..+. ..+...
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m--~~~~~~ 84 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIM--TRNLIT 84 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTTCCCTTSBGGGTC--BCSCCE
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHhcCCcccCCHHHHh--hCCCeE
Confidence 6799999 5678999999999999999999999999999889999999999998655432 1 111001111 123456
Q ss_pred EeccCCHHHHHHHh
Q psy2372 371 ISASMTFDRFKELL 384 (447)
Q Consensus 371 v~g~~~i~~~~~~l 384 (447)
++...++.+..+.+
T Consensus 85 v~~~~~l~~~~~~m 98 (138)
T 2yzi_A 85 ANVNTPLGEVLRKM 98 (138)
T ss_dssp EETTSBHHHHHHHH
T ss_pred ECCCCcHHHHHHHH
Confidence 77777777765554
No 90
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.28 E-value=1.3e-06 Score=65.27 Aligned_cols=50 Identities=16% Similarity=0.386 Sum_probs=45.9
Q ss_pred CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 302 PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 302 ~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
++.++++++++.++++.|++++.+.+||+|+ |+++|+||..|+++.+...
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHc
Confidence 3578999999999999999999999999998 9999999999999988653
No 91
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.26 E-value=1.6e-06 Score=65.80 Aligned_cols=49 Identities=16% Similarity=0.398 Sum_probs=45.1
Q ss_pred CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 303 PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 303 ~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
++++++++++.+|++.|.+++...+||+|+ |+++||+|..|++..+..+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~-~~lvGIvT~~Di~~~~~~~ 50 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 578999999999999999999999999984 9999999999999887654
No 92
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.25 E-value=2.4e-06 Score=73.85 Aligned_cols=89 Identities=10% Similarity=0.112 Sum_probs=66.5
Q ss_pred CChhhhcCC---CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcccc-cc-cccceEEecCCe
Q psy2372 294 IDITSAIQP---PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDIS-NS-YQEEIEFCEDGS 368 (447)
Q Consensus 294 ~~v~~im~~---~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei~-e~-~~~~~~~~~~~~ 368 (447)
.+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+....+ .+ .-..+.. ...
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~--~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDTGVDMRDASIADVMT--RGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSE--ESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhcCCCcccCcHHHHcC--CCC
Confidence 479999964 7899999999999999999999999999998999999999999988765331 11 1011111 123
Q ss_pred EEEeccCCHHHHHHHh
Q psy2372 369 WIISASMTFDRFKELL 384 (447)
Q Consensus 369 ~~v~g~~~i~~~~~~l 384 (447)
..++...++.+..+.+
T Consensus 106 ~~v~~~~~l~~a~~~m 121 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLM 121 (149)
T ss_dssp CEECTTCBHHHHHHHH
T ss_pred eEECCCCCHHHHHHHH
Confidence 4567777777765543
No 93
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.23 E-value=3.2e-06 Score=72.89 Aligned_cols=87 Identities=22% Similarity=0.229 Sum_probs=68.9
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCC-CCEEEEEeHHHHHHHHhcccccccccceEEecCCeE
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEY-GELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~-G~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~~ 369 (447)
.+++++|+ ++.++++++++.++++.|.+++.+.+||+|++ |+++|+||..|++..+...-+.. -..+. ....
T Consensus 23 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~-v~~~m---~~~~ 98 (148)
T 3lv9_A 23 KKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYNQKINENKIE-LEEIL---RDII 98 (148)
T ss_dssp CBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHHHHHHHSCCC-GGGTC---BCCE
T ss_pred CCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhcCCCcc-HHHhc---CCCe
Confidence 67999995 57899999999999999999999999999988 89999999999999875432111 11111 2346
Q ss_pred EEeccCCHHHHHHHh
Q psy2372 370 IISASMTFDRFKELL 384 (447)
Q Consensus 370 ~v~g~~~i~~~~~~l 384 (447)
.++...++.+..+.+
T Consensus 99 ~v~~~~~l~~~~~~m 113 (148)
T 3lv9_A 99 YISENLTIDKALERI 113 (148)
T ss_dssp EEETTSBHHHHHHHH
T ss_pred EECCCCCHHHHHHHH
Confidence 788899999876554
No 94
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.23 E-value=3.6e-06 Score=71.27 Aligned_cols=90 Identities=14% Similarity=0.160 Sum_probs=67.6
Q ss_pred CChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHH-HHHHhccc-ccccccceEEecCCeEE
Q psy2372 294 IDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDI-IHSLIGDI-SNSYQEEIEFCEDGSWI 370 (447)
Q Consensus 294 ~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DI-le~i~gei-~e~~~~~~~~~~~~~~~ 370 (447)
.+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||.+|+ +..+..+. .+..-..+. ......
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m--~~~~~~ 85 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVM--TKDVIT 85 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTTTCCCSSCBHHHHS--CSSCCC
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHhhcccCCcCHHHHh--CCCcEE
Confidence 67899994 67899999999999999999999999999988999999999999 87665432 111000111 123355
Q ss_pred EeccCCHHHHHHHhC
Q psy2372 371 ISASMTFDRFKELLS 385 (447)
Q Consensus 371 v~g~~~i~~~~~~l~ 385 (447)
++...++.++.+.+.
T Consensus 86 v~~~~~l~~~~~~~~ 100 (138)
T 2p9m_A 86 IHEDASILEAIKKMD 100 (138)
T ss_dssp EETTSBHHHHHHHHT
T ss_pred ECCCCCHHHHHHHHH
Confidence 777788888776653
No 95
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.21 E-value=1.3e-06 Score=75.98 Aligned_cols=74 Identities=18% Similarity=0.336 Sum_probs=57.8
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhc
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAI 300 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im 300 (447)
..+.+++++|++ ++.++++++++.++++.|.+++++++||+| + |+++|+++.+|+++.+..........+.+++
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~~~~~~~~~~~~~i 148 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIADQQFTISQLEHYI 148 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCCCCC------
T ss_pred ccccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHHHHHhhHHHHHhhc
Confidence 357889999985 567899999999999999999999999998 4 8999999999999988765432223444444
No 96
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.21 E-value=6.2e-06 Score=70.31 Aligned_cols=88 Identities=15% Similarity=0.278 Sum_probs=68.1
Q ss_pred CChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCC--CEEEEEeHHHHHHHHhccc-ccccccceEEecCCeE
Q psy2372 294 IDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYG--ELEGIITINDIIHSLIGDI-SNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G--~~iGiVT~~DIle~i~gei-~e~~~~~~~~~~~~~~ 369 (447)
.+++++|. ++.++++++++.++++.|.+++.+.+||+|++| +++|+||..|+++.+.... .+..-..+. ..+..
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m--~~~~~ 82 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIA--NSPIT 82 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEETTEEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGC--BCCCE
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCCCcceeEEEEEHHHHHHHHhcCCCCCCCHHHHc--CCCCe
Confidence 57899995 678999999999999999999999999999888 9999999999999876543 211111111 23456
Q ss_pred EEeccCCHHHHHHHh
Q psy2372 370 IISASMTFDRFKELL 384 (447)
Q Consensus 370 ~v~g~~~i~~~~~~l 384 (447)
.++.. ++.+..+.+
T Consensus 83 ~v~~~-~l~~a~~~m 96 (141)
T 2rih_A 83 VLDTD-PVHVAAEKM 96 (141)
T ss_dssp EETTS-BHHHHHHHH
T ss_pred EEcCC-CHHHHHHHH
Confidence 78888 988876554
No 97
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.19 E-value=6.1e-06 Score=69.46 Aligned_cols=88 Identities=14% Similarity=0.128 Sum_probs=67.2
Q ss_pred CChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-ccccccceEEecCCeEEE
Q psy2372 294 IDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-SNSYQEEIEFCEDGSWII 371 (447)
Q Consensus 294 ~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~e~~~~~~~~~~~~~~~v 371 (447)
.+++++|+ ++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|++..+.... .+..-..+.. .....+
T Consensus 4 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~--~~~~~v 80 (133)
T 2ef7_A 4 EIVKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFMT--ASLITI 80 (133)
T ss_dssp CBGGGTSBCSCCEEETTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCTTCBGGGTSE--ECCCCE
T ss_pred ccHHHhccCCCEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEcHHHHHHHHhcCCCcccCHHHHcC--CCCEEE
Confidence 67899995 578999999999999999999999999999 799999999999998876543 2211111111 133567
Q ss_pred eccCCHHHHHHHh
Q psy2372 372 SASMTFDRFKELL 384 (447)
Q Consensus 372 ~g~~~i~~~~~~l 384 (447)
+...++.++.+.+
T Consensus 81 ~~~~~l~~~~~~~ 93 (133)
T 2ef7_A 81 REDSPITGALALM 93 (133)
T ss_dssp ETTSBHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 7888888876554
No 98
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.19 E-value=1.9e-06 Score=75.82 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=53.8
Q ss_pred CChhhhcC----CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 294 IDITSAIQ----PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 294 ~~v~~im~----~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
.+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|+++.+..
T Consensus 24 ~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 85 (165)
T 3fhm_A 24 TFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAG 85 (165)
T ss_dssp CBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHH
T ss_pred cCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 67899996 48899999999999999999999999999999999999999999988765
No 99
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.18 E-value=6.2e-06 Score=72.23 Aligned_cols=91 Identities=9% Similarity=0.130 Sum_probs=66.1
Q ss_pred CChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-c-----c-ccccceEE-e
Q psy2372 294 IDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-S-----N-SYQEEIEF-C 364 (447)
Q Consensus 294 ~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~-----e-~~~~~~~~-~ 364 (447)
.+++++|+ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++..+.... . + .....+.. .
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~~v~~im 84 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQESSLQRSAQGDSLAFETPLFEVM 84 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHHHCC---------CCCBHHHHS
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHHHhhcccccccchhcccCHHHHh
Confidence 67899994 6789999999999999999999999999998899999999999998876421 0 0 00000000 0
Q ss_pred cCCeEEEeccCCHHHHHHHh
Q psy2372 365 EDGSWIISASMTFDRFKELL 384 (447)
Q Consensus 365 ~~~~~~v~g~~~i~~~~~~l 384 (447)
......++...++.++.+.+
T Consensus 85 ~~~~~~v~~~~~l~~a~~~m 104 (160)
T 2o16_A 85 HTDVTSVAPQAGLKESAIYM 104 (160)
T ss_dssp CSCEEEBCTTSBHHHHHHHH
T ss_pred cCCCeEECCCCCHHHHHHHH
Confidence 12445667777777765544
No 100
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.18 E-value=2e-06 Score=72.25 Aligned_cols=88 Identities=15% Similarity=0.220 Sum_probs=66.9
Q ss_pred CChhhhcCC---CeeeCCCCCHHHHHHHHHHcCCceEEEEcCC-CCEEEEEeHHHHHHHHhcccccccccceEEecCCeE
Q psy2372 294 IDITSAIQP---PLFIPETISTMQLLETFKKNKSELSLVIDEY-GELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im~~---~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~-G~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~~ 369 (447)
.+++++|++ +.++++++++.++++.|++++.+.+||+|++ |+++|+||..|++..+...-.+..-..+. . ...
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m--~-~~~ 79 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL--R-TAV 79 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC--B-CCC
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc--C-CCe
Confidence 678999963 6799999999999999999999999999988 89999999999998765432111001111 1 135
Q ss_pred EEeccCCHHHHHHHh
Q psy2372 370 IISASMTFDRFKELL 384 (447)
Q Consensus 370 ~v~g~~~i~~~~~~l 384 (447)
.++...++.+..+.+
T Consensus 80 ~v~~~~~l~~a~~~m 94 (127)
T 3nqr_A 80 VVPESKRVDRMLKEF 94 (127)
T ss_dssp EEETTCBHHHHHHHH
T ss_pred EECCCCcHHHHHHHH
Confidence 688888888876554
No 101
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.18 E-value=1.7e-06 Score=75.16 Aligned_cols=90 Identities=11% Similarity=0.063 Sum_probs=67.7
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-cc----c-cccceEEe
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-SN----S-YQEEIEFC 364 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~e----~-~~~~~~~~ 364 (447)
.+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..+...- .. + .-..+.
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~~~~~~~~~~~~~~v~~~m-- 92 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMT-- 92 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGGC--
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHHhccccccccccCcHHHhc--
Confidence 56899996 4789999999999999999999999999999999999999999999886532 11 1 001111
Q ss_pred cCCeEEEeccCCHHHHHHHhC
Q psy2372 365 EDGSWIISASMTFDRFKELLS 385 (447)
Q Consensus 365 ~~~~~~v~g~~~i~~~~~~l~ 385 (447)
....+.++...++.++.+.+.
T Consensus 93 ~~~~~~v~~~~~l~~a~~~~~ 113 (156)
T 3ctu_A 93 KTDVAVVSPDFTITEVLHKLV 113 (156)
T ss_dssp BCSCCCBCSSCCHHHHHHHTT
T ss_pred cCCceeeCCCCcHHHHHHHHH
Confidence 123456777788888776653
No 102
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.18 E-value=1.8e-06 Score=72.57 Aligned_cols=57 Identities=11% Similarity=0.121 Sum_probs=52.2
Q ss_pred CChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 294 IDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 294 ~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
.+++++| ++++++++++++.++++.|++++.+.+||+|+ |+++|+||.+|+++.+..
T Consensus 5 ~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~ 62 (128)
T 3gby_A 5 VTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKG 62 (128)
T ss_dssp CBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSS
T ss_pred eEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhh
Confidence 6899999 56789999999999999999999999999998 999999999999987643
No 103
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.17 E-value=3.7e-06 Score=79.03 Aligned_cols=59 Identities=10% Similarity=0.134 Sum_probs=54.9
Q ss_pred CChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 294 IDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 294 ~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
.+++++| +++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|+++.+...
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 7 LKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADGNNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp CBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHHCC
T ss_pred CcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHHh
Confidence 6799999 5688999999999999999999999999999999999999999999998754
No 104
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.16 E-value=2.4e-06 Score=75.05 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=65.6
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-cc-c-cccceE-EecC
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-SN-S-YQEEIE-FCED 366 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-~e-~-~~~~~~-~~~~ 366 (447)
..++++|. ++.++++++++.+|++.|.+++.+.+||+|+.|+++|+||..|++..+...- +. . ....+. ....
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~~~lvGiit~~Di~~~~~~~~~~~~~~~~~~v~~im~~ 94 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQMEHDLSQEIMADTDIVHMTKT 94 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC-CBEEEEEEHHHHHHHHHHHTCCHHHHTTSBGGGTCBC
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCCCcEEEEEEecchhhhhhhcccccccccccCHHHhhcC
Confidence 35788885 4689999999999999999999999999999999999999999998876532 21 1 111110 0122
Q ss_pred CeEEEeccCCHHHHHHHh
Q psy2372 367 GSWIISASMTFDRFKELL 384 (447)
Q Consensus 367 ~~~~v~g~~~i~~~~~~l 384 (447)
+...++...++.++.+.+
T Consensus 95 ~~~~v~~~~~l~~~~~~m 112 (156)
T 3k6e_A 95 DVAVVSPDFTITEVLHKL 112 (156)
T ss_dssp SCCCBCTTCCHHHHHHHT
T ss_pred CceecccccHHHHHHHHH
Confidence 334566677777766655
No 105
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.14 E-value=3.4e-06 Score=71.30 Aligned_cols=88 Identities=2% Similarity=0.038 Sum_probs=67.4
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcC-CCCEEEEEeHHHHHHHHhccc-cc-ccccceEEecCC
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDE-YGELEGIITINDIIHSLIGDI-SN-SYQEEIEFCEDG 367 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe-~G~~iGiVT~~DIle~i~gei-~e-~~~~~~~~~~~~ 367 (447)
.+++++|+ ++.++++++++.++++.|++++.+.+||+|+ .|+++|+||..|++..+...- .. ..-..+. ..
T Consensus 2 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m---~~ 78 (130)
T 3hf7_A 2 VSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA---DE 78 (130)
T ss_dssp CBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS---BC
T ss_pred cCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc---cC
Confidence 56899994 4789999999999999999999999999975 589999999999999876532 11 1001111 23
Q ss_pred eEEEeccCCHHHHHHHh
Q psy2372 368 SWIISASMTFDRFKELL 384 (447)
Q Consensus 368 ~~~v~g~~~i~~~~~~l 384 (447)
.+.++...++.+..+.+
T Consensus 79 ~~~v~~~~~l~~~~~~m 95 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKF 95 (130)
T ss_dssp CCEEETTCBHHHHHHHH
T ss_pred CeEeCCCCcHHHHHHHH
Confidence 46788889999876554
No 106
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.14 E-value=4.3e-06 Score=69.46 Aligned_cols=87 Identities=21% Similarity=0.182 Sum_probs=63.7
Q ss_pred ChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcccc--cccccceEEecCCeEEE
Q psy2372 295 DITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDIS--NSYQEEIEFCEDGSWII 371 (447)
Q Consensus 295 ~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei~--e~~~~~~~~~~~~~~~v 371 (447)
+++++|+ ++.++++++++.++++.|.+++.+.+||+| +|+++|+||.+|+++.+....+ +..-..+. ......+
T Consensus 2 ~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m--~~~~~~v 78 (125)
T 1pbj_A 2 RVEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVK-EGVRVGIVTTWDVLEAIAEGDDLAEVKVWEVM--ERDLVTI 78 (125)
T ss_dssp CHHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEE-TTEEEEEEEHHHHHHHHHHTCCTTTSBHHHHC--BCGGGEE
T ss_pred CHHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEe-CCeeEEEEeHHHHHHHHhcCCcccccCHHHHc--CCCCeEE
Confidence 4788885 678999999999999999999999999999 7999999999999987654321 11000111 1233456
Q ss_pred eccCCHHHHHHHh
Q psy2372 372 SASMTFDRFKELL 384 (447)
Q Consensus 372 ~g~~~i~~~~~~l 384 (447)
+...++.+..+.+
T Consensus 79 ~~~~~l~~~~~~~ 91 (125)
T 1pbj_A 79 SPRATIKEAAEKM 91 (125)
T ss_dssp CTTSCHHHHHHHH
T ss_pred CCCCCHHHHHHHH
Confidence 7777777765544
No 107
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.13 E-value=8.9e-06 Score=70.49 Aligned_cols=89 Identities=12% Similarity=0.113 Sum_probs=68.4
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc-------ccccccceEE
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI-------SNSYQEEIEF 363 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei-------~e~~~~~~~~ 363 (447)
.+++++|. ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..+...- ....-..+.
T Consensus 11 ~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~v~~~m- 89 (157)
T 2emq_A 11 MTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILGLERIEFERLETMKVEEVM- 89 (157)
T ss_dssp CBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBCSSSBCGGGGGTCBGGGTC-
T ss_pred CcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhcccccchHHhcCCcHHHHh-
Confidence 67899996 6789999999999999999999999999998899999999999998876420 111001111
Q ss_pred ecCCeEEEeccCCHHHHHHHh
Q psy2372 364 CEDGSWIISASMTFDRFKELL 384 (447)
Q Consensus 364 ~~~~~~~v~g~~~i~~~~~~l 384 (447)
......++...++.++.+.+
T Consensus 90 -~~~~~~v~~~~~l~~a~~~m 109 (157)
T 2emq_A 90 -NRNIPRLRLDDSLMKAVGLI 109 (157)
T ss_dssp -BCCCCEEETTSBHHHHHHHH
T ss_pred -CCCCceecCCCcHHHHHHHH
Confidence 23446788888888876654
No 108
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.12 E-value=4e-06 Score=71.34 Aligned_cols=88 Identities=10% Similarity=0.160 Sum_probs=67.9
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCC-CCEEEEEeHHHHHHHHhccc-ccccccceEEecCCe
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEY-GELEGIITINDIIHSLIGDI-SNSYQEEIEFCEDGS 368 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~-G~~iGiVT~~DIle~i~gei-~e~~~~~~~~~~~~~ 368 (447)
.+++++|+ ++.++++++++.++++.|++++.+.+||+|++ |+++|+||..|++..+...- .+..-..+. .+ .
T Consensus 3 ~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m--~~-~ 79 (136)
T 3lfr_A 3 LQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL--RP-A 79 (136)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC--BC-C
T ss_pred CChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc--CC-C
Confidence 67899995 46899999999999999999999999999987 89999999999998876322 111111111 12 5
Q ss_pred EEEeccCCHHHHHHHh
Q psy2372 369 WIISASMTFDRFKELL 384 (447)
Q Consensus 369 ~~v~g~~~i~~~~~~l 384 (447)
..++...++.++.+.+
T Consensus 80 ~~v~~~~~l~~~~~~m 95 (136)
T 3lfr_A 80 TFVPESKRLNVLLREF 95 (136)
T ss_dssp CEEETTCBHHHHHHHH
T ss_pred eEECCCCcHHHHHHHH
Confidence 6788899999876554
No 109
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.12 E-value=2.9e-06 Score=71.52 Aligned_cols=86 Identities=10% Similarity=0.101 Sum_probs=67.0
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCC-CCEEEEEeHHHHHHHHhcccccccccceEEecCCeE
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEY-GELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~-G~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~~ 369 (447)
.+++++|+ ++.++++++++.++++.|++++.+.+||+|++ |+++|+||..|++..+.+. +..-..+. ...+
T Consensus 5 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~--~~~v~~~m---~~~~ 79 (129)
T 3jtf_A 5 RTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEP--ALDIRSLV---RPAV 79 (129)
T ss_dssp CBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCT--TSCGGGGC---BCCC
T ss_pred CCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccC--CcCHHHHh---CCCe
Confidence 67999996 45799999999999999999999999999986 8999999999998876431 11111111 1246
Q ss_pred EEeccCCHHHHHHHh
Q psy2372 370 IISASMTFDRFKELL 384 (447)
Q Consensus 370 ~v~g~~~i~~~~~~l 384 (447)
.++...++.+..+.+
T Consensus 80 ~v~~~~~l~~~~~~m 94 (129)
T 3jtf_A 80 FIPEVKRLNVLLREF 94 (129)
T ss_dssp EEETTCBHHHHHHHH
T ss_pred EeCCCCcHHHHHHHH
Confidence 788889999987665
No 110
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.11 E-value=7.3e-06 Score=73.14 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=92.4
Q ss_pred EEEEEhh--hHHHHhHhCCCccCCChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCC-CCEEEEEeHHHHH
Q psy2372 273 IGTLNTK--TLFKKIISNRSIVNIDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEY-GELEGIITINDII 346 (447)
Q Consensus 273 vGiv~~~--DLl~~~~~~~~~~~~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~-G~~iGiVT~~DIl 346 (447)
-|.+... +++.....-.. .+++++|+ ++.++++++++.++++.|++++...+||+|++ |+++|+||..|++
T Consensus 16 ~g~l~~~e~~~i~~~l~l~~---~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~ 92 (173)
T 3ocm_A 16 VPAFGVEERNMVSGVLTLAE---RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLV 92 (173)
T ss_dssp --CCCHHHHHHHHHHHHHTT---SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHH
T ss_pred cCCcCHHHHHHHHHHhccCC---CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHH
Confidence 3666633 34443333222 68999994 47899999999999999999999999999986 8999999999999
Q ss_pred HHHhcccccccccceEEecCCeEEEeccCCHHHHHHHhC---CCCCCCC-cCCC---CcccHhHHHHhhcCCCCCCCcE
Q psy2372 347 HSLIGDISNSYQEEIEFCEDGSWIISASMTFDRFKELLS---NQVNFPV-KISR---NYHTLAGFVMTFLGHIPKISEN 418 (447)
Q Consensus 347 e~i~gei~e~~~~~~~~~~~~~~~v~g~~~i~~~~~~l~---~~~~l~~-~~~~---~~~Tl~G~i~~~lg~iP~~g~~ 418 (447)
..+...-+..-. .......++...++.++.+.+. +. -+|- ++.+ ..-|...++-+..|.++...+.
T Consensus 93 ~~~~~~~~~~v~-----~~~~~~~v~~~~~l~~al~~m~~~~~~-~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~~~ 165 (173)
T 3ocm_A 93 ADLITEGRVRRN-----RLRDPIIVHESIGILRLMDTLKRSRGQ-LVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDEL 165 (173)
T ss_dssp HHHHHHSSCCGG-----GSBCCCEECGGGCHHHHHHHHHHSTTC-CEEEECTTCCEEEEECHHHHHHHHHCCCCCTTSC
T ss_pred HHHhcCCcchhH-----hcCCCeEECCCCcHHHHHHHHHHcCCe-EEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcccc
Confidence 887542111111 1234467888999998765542 22 0221 1122 2347778888888888877664
No 111
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.11 E-value=3.4e-06 Score=71.05 Aligned_cols=56 Identities=11% Similarity=0.097 Sum_probs=50.9
Q ss_pred CChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHH
Q psy2372 294 IDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSL 349 (447)
Q Consensus 294 ~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i 349 (447)
.+++++| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++...
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~ 64 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKG 64 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECGGGBEEEEEEHHHHHHTT
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECCCCeEEEEEeHHHHHHHH
Confidence 4789999 5678999999999999999999999999999889999999999999533
No 112
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.09 E-value=1.3e-05 Score=71.12 Aligned_cols=118 Identities=14% Similarity=0.123 Sum_probs=81.4
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCC-CCEEEEEeHHHHHHHHhcccccccccceEEecCCeE
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEY-GELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~-G~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~~ 369 (447)
.+++++|+ ++.++++++++.++++.|++++.+.+||+|++ |+++|+||..|++..+...-+.. -..+. ....
T Consensus 42 ~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~~~~-v~~im---~~~~ 117 (172)
T 3lhh_A 42 RTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNNVDDMVGIISAKQLLSESIAGERLE-LVDLV---KNCN 117 (172)
T ss_dssp -CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSSTTSEEEEEEHHHHHHHHHTTCCCC-GGGGC---BCCE
T ss_pred CCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCeEEEEEEHHHHHHHHhhcCccc-HHHHh---cCCe
Confidence 67899996 46799999999999999999999999999988 99999999999999876431111 11122 3456
Q ss_pred EEeccCCHHHHHHHh---CCCCCCCC-cCCCC---cccHhHHHHhhcCCCCCCC
Q psy2372 370 IISASMTFDRFKELL---SNQVNFPV-KISRN---YHTLAGFVMTFLGHIPKIS 416 (447)
Q Consensus 370 ~v~g~~~i~~~~~~l---~~~~~l~~-~~~~~---~~Tl~G~i~~~lg~iP~~g 416 (447)
.++...++.++.+.+ ++. .+|- ++++. .-|...++-+..|.+....
T Consensus 118 ~v~~~~~l~~a~~~m~~~~~~-~~pVvd~~g~lvGiit~~Dil~~l~~~~~de~ 170 (172)
T 3lhh_A 118 FVPNSLSGMELLEHFRTTGSQ-MVFVVDEYGDLKGLVTLQDMMDALTGEFFQED 170 (172)
T ss_dssp EEETTCCHHHHHHHHHHHTCS-EEEEECTTSCEEEEEEHHHHHHHHHTTCC---
T ss_pred EeCCCCCHHHHHHHHHHcCCe-EEEEEeCCCCEEEEeeHHHHHHHHhCCCcccc
Confidence 788899999876554 222 0221 11122 3477777777777776543
No 113
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.06 E-value=1.4e-05 Score=71.66 Aligned_cols=88 Identities=9% Similarity=0.078 Sum_probs=64.7
Q ss_pred CChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc--c-ccccccceEEecCCeE
Q psy2372 294 IDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD--I-SNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge--i-~e~~~~~~~~~~~~~~ 369 (447)
.+++++| +++.++++++++.+|++.|.+++.+.+||+|++|+++|+||.+|++..+... . .+..-..+. .....
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im--~~~~~ 86 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKRFIPRNKKPDEVPIRLVM--RKPIP 86 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTS--BSSCC
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHhhcccCcccCCHHHHh--CCCCc
Confidence 5789999 4678999999999999999999999999999889999999999999987631 1 111000111 11334
Q ss_pred EEeccCCHHHHHHH
Q psy2372 370 IISASMTFDRFKEL 383 (447)
Q Consensus 370 ~v~g~~~i~~~~~~ 383 (447)
.++...++.+..+.
T Consensus 87 ~v~~~~~l~~a~~~ 100 (184)
T 1pvm_A 87 KVKSDYDVKDVAAY 100 (184)
T ss_dssp EEETTCBHHHHHHH
T ss_pred EECCCCCHHHHHHH
Confidence 56666777776544
No 114
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.04 E-value=8.5e-06 Score=68.57 Aligned_cols=88 Identities=10% Similarity=0.174 Sum_probs=66.6
Q ss_pred CChhhhcCC---CeeeCCCCCHHHHHHHHHHcCCceEEEEcCC-CCEEEEEeHHHHHHHHhcccccccccceEEecCCeE
Q psy2372 294 IDITSAIQP---PLFIPETISTMQLLETFKKNKSELSLVIDEY-GELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im~~---~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~-G~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~~ 369 (447)
.+++++|++ ..++++++++.++++.|++++.+.+||+|++ |+++|+||..|++..+.....+..-..+.. ...
T Consensus 6 ~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m~---~~~ 82 (130)
T 3i8n_A 6 VPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVMR---PIQ 82 (130)
T ss_dssp -CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHSE---ECC
T ss_pred CCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHhc---CCc
Confidence 678999963 3489999999999999999999999999987 899999999999998765431110011111 135
Q ss_pred EEeccCCHHHHHHHh
Q psy2372 370 IISASMTFDRFKELL 384 (447)
Q Consensus 370 ~v~g~~~i~~~~~~l 384 (447)
.++...++.+..+.+
T Consensus 83 ~v~~~~~l~~~~~~m 97 (130)
T 3i8n_A 83 VVLNNTALPKVFDQM 97 (130)
T ss_dssp EEETTSCHHHHHHHH
T ss_pred CcCCCCcHHHHHHHH
Confidence 688888988876554
No 115
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.04 E-value=1.5e-06 Score=90.79 Aligned_cols=99 Identities=10% Similarity=0.107 Sum_probs=19.9
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcC--
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQ-- 301 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~-- 301 (447)
.+.+++++|+|..+++++++++++.++++.|.+++.+.+||+|++ ++++|+|+.+|+++....... ..+.+.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~~-----~~d~~~~l 232 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHNE-----LVDSQKRY 232 (503)
T ss_dssp ----------------------------------------------------------------CCC-----CBCTTSCB
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhcccc-----hhcccccc
Confidence 456799999986668899999999999999999999999999965 899999999999987754322 222221
Q ss_pred -CCeeeCCCCCHHHHHHHHHHcCCceEEE
Q psy2372 302 -PPLFIPETISTMQLLETFKKNKSELSLV 329 (447)
Q Consensus 302 -~~~~V~~~~~l~~al~~m~~~~~~~a~V 329 (447)
....++. .+..+.++.|.+.+.+...|
T Consensus 233 ~v~a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 233 LVGAGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp CCEEEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred ccccccCc-hhHHHHHHHHHhhhccceEE
Confidence 1134455 66677788888888887644
No 116
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.03 E-value=4.8e-06 Score=72.68 Aligned_cols=87 Identities=13% Similarity=0.117 Sum_probs=66.8
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCC-CEEEEEeHHHHHHHHhcccccccccceEEecCCeE
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYG-ELEGIITINDIIHSLIGDISNSYQEEIEFCEDGSW 369 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G-~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~~ 369 (447)
.+++++|+ ++.++++++++.++++.|++++.+.+||+|++| +++|+||..|++..+...- +..-..+.. ..+
T Consensus 38 ~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~~~~~~~-~~~v~~im~---~~~ 113 (156)
T 3oi8_A 38 LEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYMFNPE-QFHLKSILR---PAV 113 (156)
T ss_dssp CBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGSSCGG-GCCHHHHCB---CCC
T ss_pred CCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHcCC-cccHHHHcC---CCE
Confidence 68999996 478999999999999999999999999999874 9999999999998764321 110011111 145
Q ss_pred EEeccCCHHHHHHHh
Q psy2372 370 IISASMTFDRFKELL 384 (447)
Q Consensus 370 ~v~g~~~i~~~~~~l 384 (447)
.++...++.++.+.+
T Consensus 114 ~v~~~~~l~~a~~~m 128 (156)
T 3oi8_A 114 FVPEGKSLTALLKEF 128 (156)
T ss_dssp EEETTSBHHHHHHHH
T ss_pred EECCCCCHHHHHHHH
Confidence 688888888876655
No 117
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.02 E-value=1.1e-05 Score=68.66 Aligned_cols=58 Identities=17% Similarity=0.236 Sum_probs=52.0
Q ss_pred CChhh---hc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 294 IDITS---AI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 294 ~~v~~---im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
.++++ +| +++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..+.+
T Consensus 8 ~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 8 IPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp SBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred cchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcCCCcEEEEEcHHHHHHHhcc
Confidence 45667 66 577899999999999999999999999999988999999999999988764
No 118
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.01 E-value=1.1e-05 Score=70.33 Aligned_cols=58 Identities=7% Similarity=0.165 Sum_probs=52.9
Q ss_pred CChhhhcC-CCeeeCCCCCHHHHHHHHHHcCCceEEEEcC--CCCEEEEEeHHHHHHHHhc
Q psy2372 294 IDITSAIQ-PPLFIPETISTMQLLETFKKNKSELSLVIDE--YGELEGIITINDIIHSLIG 351 (447)
Q Consensus 294 ~~v~~im~-~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe--~G~~iGiVT~~DIle~i~g 351 (447)
.+++++|. ++.++++++++.++++.|.+++.+.+||+|+ +|+++|+||..|++..+..
T Consensus 13 ~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~ 73 (164)
T 2pfi_A 13 VRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQA 73 (164)
T ss_dssp CBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC
T ss_pred CCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHh
Confidence 67999995 5789999999999999999999999999996 7999999999999988754
No 119
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.01 E-value=6.1e-06 Score=71.64 Aligned_cols=118 Identities=11% Similarity=-0.005 Sum_probs=79.6
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEE-cC-CCCEEEEEeHHHHHHHHhcccccccccceEEecCCe
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVI-DE-YGELEGIITINDIIHSLIGDISNSYQEEIEFCEDGS 368 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~Vv-De-~G~~iGiVT~~DIle~i~gei~e~~~~~~~~~~~~~ 368 (447)
.+++++|+ ++.++++++++.++++.|.+++.+.+||+ |+ .|+++|+||..|++..+...-+.. -..+. ...
T Consensus 20 ~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~~~~~~~-v~~~m---~~~ 95 (153)
T 3oco_A 20 KVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQARIDDKAK-ISTIM---RDI 95 (153)
T ss_dssp CBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHHHHTTSB-GGGTC---BCC
T ss_pred CEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHhcCCCCc-HHHHh---CCC
Confidence 67999996 58899999999999999999999999999 65 489999999999998876432111 11111 245
Q ss_pred EEEeccCCHHHHHHHh---CCCCCCCC-cCCCC---cccHhHHHHhhcCCCCCCC
Q psy2372 369 WIISASMTFDRFKELL---SNQVNFPV-KISRN---YHTLAGFVMTFLGHIPKIS 416 (447)
Q Consensus 369 ~~v~g~~~i~~~~~~l---~~~~~l~~-~~~~~---~~Tl~G~i~~~lg~iP~~g 416 (447)
..++...++.++.+.+ ++. .+|- ++++. .-|...++-...|.+....
T Consensus 96 ~~v~~~~~l~~~~~~m~~~~~~-~lpVvd~~g~~vGivt~~dil~~l~~~~~de~ 149 (153)
T 3oco_A 96 VSVPENMKVPDVMEEMSAHRVP-MAIVIDEYGGTSGIITDKDVYEELFGNLRDEQ 149 (153)
T ss_dssp EEEETTSBHHHHHHHHHHTTCS-CEEEECTTSCEEEEECHHHHHHHHHC------
T ss_pred eEECCCCCHHHHHHHHHHcCCc-EEEEEeCCCCEEEEeeHHHHHHHHhccCCCcc
Confidence 6788899999876554 222 1231 11222 3477777777777766543
No 120
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.98 E-value=9.6e-06 Score=70.69 Aligned_cols=92 Identities=14% Similarity=0.005 Sum_probs=68.4
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhccc--cc--ccccceEE-ec
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGDI--SN--SYQEEIEF-CE 365 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~gei--~e--~~~~~~~~-~~ 365 (447)
.+++++|+ ++.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..+...- +. .....+.. ..
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~v~~~m~ 93 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFGLERIEFEKLDQITVEEVML 93 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBCSSSBCGGGTTTSBHHHHSB
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhhhcccchhhhccCCHHHhcC
Confidence 67999995 4789999999999999999999999999999899999999999999876421 00 00000000 11
Q ss_pred CCeEEEeccCCHHHHHHHhC
Q psy2372 366 DGSWIISASMTFDRFKELLS 385 (447)
Q Consensus 366 ~~~~~v~g~~~i~~~~~~l~ 385 (447)
.+...++...++.++.+.+.
T Consensus 94 ~~~~~v~~~~~l~~a~~~m~ 113 (159)
T 1yav_A 94 TDIPRLHINDPIMKGFGMVI 113 (159)
T ss_dssp CSCCEEETTSBHHHHHHHTT
T ss_pred CCCceEcCCCCHHHHHHHHH
Confidence 23456778888888776653
No 121
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.98 E-value=1.3e-05 Score=67.67 Aligned_cols=56 Identities=18% Similarity=0.181 Sum_probs=50.6
Q ss_pred ChhhhcC----CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhc
Q psy2372 295 DITSAIQ----PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 295 ~v~~im~----~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~g 351 (447)
+++++|+ ++.++++++++.++++.|.+++.+.+||+| +|+++|+||..|++..+..
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~~~~~Givt~~dl~~~~~~ 66 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVMK-DEKLVGILTERDFSRKSYL 66 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHGGG
T ss_pred eHHHHHhcCCCCcEEECCCCcHHHHHHHHHhcCCCEEEEEE-CCEEEEEEehHHHHHHHHH
Confidence 6889985 578999999999999999999999999998 7999999999999976553
No 122
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.97 E-value=1.4e-05 Score=69.24 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=51.8
Q ss_pred CChhhhcCCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHHHhcc
Q psy2372 294 IDITSAIQPPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHSLIGD 352 (447)
Q Consensus 294 ~~v~~im~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~i~ge 352 (447)
.+++++ +++.++++++++.+|++.|.+++...+||+|++|+++|+||..|++..+...
T Consensus 23 ~~v~~~-~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~vGivt~~dl~~~~~~~ 80 (152)
T 2uv4_A 23 LQIGTY-ANIAMVRTTTPVYVALGIFVQHRVSALPVVDEKGRVVDIYSKFDVINLAAEK 80 (152)
T ss_dssp HTCSBC-SSCCCEETTCBHHHHHHHHHHHCCSEEEEECTTSBEEEEEEHHHHHHHHHCS
T ss_pred ccCCcc-CCceEeCCCCcHHHHHHHHHHcCCceEeEECCCCcEEEEEeHHHHHHHhcch
Confidence 356666 7788999999999999999999999999999889999999999999887653
No 123
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.94 E-value=1.2e-05 Score=68.93 Aligned_cols=55 Identities=20% Similarity=0.191 Sum_probs=50.7
Q ss_pred CChhhhcCC---CeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHHH
Q psy2372 294 IDITSAIQP---PLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIHS 348 (447)
Q Consensus 294 ~~v~~im~~---~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle~ 348 (447)
.+++++|++ +.++++++++.++++.|.+++.+.+||+|++|+++|+||..|++..
T Consensus 5 ~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~G~vt~~dl~~~ 62 (152)
T 4gqw_A 5 YTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLLAL 62 (152)
T ss_dssp SBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHTTC
T ss_pred EEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCCCeEEEEEEHHHHHHh
Confidence 679999954 7899999999999999999999999999999999999999999854
No 124
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.93 E-value=7.3e-06 Score=71.37 Aligned_cols=61 Identities=21% Similarity=0.396 Sum_probs=54.6
Q ss_pred cCceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh
Q psy2372 223 LDDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS 287 (447)
Q Consensus 223 l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~ 287 (447)
..+.+++++|++ +.++++++++.++++.|.+++.+++||+|++ |+++|+|+.+|+++.+.+
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l~~ 153 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLEEALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLALWK 153 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHHHHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHHHH
Confidence 456789999986 6689999999999999999999999999854 899999999999998764
No 125
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.92 E-value=3e-05 Score=68.92 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=52.7
Q ss_pred CChhhhcCC-----Ceee--CCCCCHHHHHHHHHHcCCceEEEE--cCCCCEEEEEeHHHHHHHHhc
Q psy2372 294 IDITSAIQP-----PLFI--PETISTMQLLETFKKNKSELSLVI--DEYGELEGIITINDIIHSLIG 351 (447)
Q Consensus 294 ~~v~~im~~-----~~~V--~~~~~l~~al~~m~~~~~~~a~Vv--De~G~~iGiVT~~DIle~i~g 351 (447)
.+++++|++ +.++ ++++++.+|++.|.+++.+.+||+ |++|+++|+||..|++..+..
T Consensus 11 ~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 11 TLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp CBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 679999964 5788 999999999999999999999999 788999999999999998754
No 126
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.86 E-value=1.5e-05 Score=70.51 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=50.2
Q ss_pred CChhhhcC---CCeeeCCCCCHHHHHHHHHHcCCceEEEEcCCCCEEEEEeHHHHHH
Q psy2372 294 IDITSAIQ---PPLFIPETISTMQLLETFKKNKSELSLVIDEYGELEGIITINDIIH 347 (447)
Q Consensus 294 ~~v~~im~---~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~G~~iGiVT~~DIle 347 (447)
.+++++|+ ++.++++++++.+|++.|.+++.+.+||+|++|+++|+||..|++.
T Consensus 4 ~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~ 60 (180)
T 3sl7_A 4 YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLLA 60 (180)
T ss_dssp CBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHTC
T ss_pred eeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCCCeEEEEEEHHHHHh
Confidence 57899995 4789999999999999999999999999999999999999999984
No 127
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.84 E-value=2.1e-05 Score=72.25 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=55.3
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhC
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISN 288 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~ 288 (447)
.+.+++++|++ ++.++++++++.++++.|.+++...+||+|++ |+++|+|+.+|+++.+.+.
T Consensus 114 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~~e 175 (205)
T 3kxr_A 114 PHEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVREH 175 (205)
T ss_dssp TTSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHHHH
T ss_pred CcchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHHH
Confidence 46789999984 56789999999999999999999999999854 8999999999999987653
No 128
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.83 E-value=2.9e-05 Score=73.68 Aligned_cols=60 Identities=20% Similarity=0.213 Sum_probs=53.6
Q ss_pred CChhhhc-CCCeeeCCCCCHHHHHHHHHHcCCceEEEEcCC--CCEEEEEeHHHHHHHHhccc
Q psy2372 294 IDITSAI-QPPLFIPETISTMQLLETFKKNKSELSLVIDEY--GELEGIITINDIIHSLIGDI 353 (447)
Q Consensus 294 ~~v~~im-~~~~~V~~~~~l~~al~~m~~~~~~~a~VvDe~--G~~iGiVT~~DIle~i~gei 353 (447)
..++++| +++.++++++++.++.+.|.+++.+..||||+. |+++|+||+.|++..+...+
T Consensus 13 ~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~ 75 (250)
T 2d4z_A 13 IQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRI 75 (250)
T ss_dssp CBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHH
T ss_pred CChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhh
Confidence 6799999 577899999999999999999999999999974 67999999999998876543
No 129
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.80 E-value=5.3e-05 Score=79.60 Aligned_cols=90 Identities=14% Similarity=0.225 Sum_probs=70.0
Q ss_pred CCChhhhcC-CCeeeCCC-CCHHHHHHHHHHcCCceEEEEc-CCCCEEEEEeHHHHHHHHhccc-ccc-cccceEEecCC
Q psy2372 293 NIDITSAIQ-PPLFIPET-ISTMQLLETFKKNKSELSLVID-EYGELEGIITINDIIHSLIGDI-SNS-YQEEIEFCEDG 367 (447)
Q Consensus 293 ~~~v~~im~-~~~~V~~~-~~l~~al~~m~~~~~~~a~VvD-e~G~~iGiVT~~DIle~i~gei-~e~-~~~~~~~~~~~ 367 (447)
..+++++|. ++.+++++ +++.++++.|++++.+.+||+| ++|+++|+||..|+++.+...- ..+ .-..+. ..+
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im--~~~ 460 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL--NKR 460 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE--ETT
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh--cCC
Confidence 367999994 67899999 9999999999999999999999 7899999999999999887642 211 111121 234
Q ss_pred eEEEeccCCHHHHHHHh
Q psy2372 368 SWIISASMTFDRFKELL 384 (447)
Q Consensus 368 ~~~v~g~~~i~~~~~~l 384 (447)
...++...++.++.+.+
T Consensus 461 ~~~v~~~~~l~~a~~~m 477 (527)
T 3pc3_A 461 VIRLNESEILGKLARVL 477 (527)
T ss_dssp CCEEETTSBHHHHHHHH
T ss_pred CeEECCCCcHHHHHHHH
Confidence 45677788888877766
No 130
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.80 E-value=4.8e-05 Score=79.58 Aligned_cols=135 Identities=10% Similarity=0.041 Sum_probs=92.9
Q ss_pred CCCCHHHHHHHHHhchhc--------------CccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHH
Q psy2372 189 DLITEEEIYKLFREGFDI--------------GIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKI 254 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~--------------g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~ 254 (447)
+..|-+|...++.+..-+ |.++..+ +.. ..-.+.+++++|++ .+++++++++++.++++.|
T Consensus 128 ~~~tv~ea~~~m~~~~~s~~pVvd~g~~~~lvGiVt~rD--l~~--~~~~~~~V~~vM~~-~~~vtv~~~~~l~eal~~m 202 (511)
T 3usb_A 128 PEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRD--MRF--IQDYSIKISDVMTK-EQLITAPVGTTLSEAEKIL 202 (511)
T ss_dssp TTSBHHHHHHHHHHHCCSEEEEESCTTTCBEEEEEEHHH--HTT--CCCSSSBHHHHCCC-CCCCCEETTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEEehH--hhh--hccCCCcHHHhccc-CCCEEECCCCCHHHHHHHH
Confidence 345677777777664322 3444322 221 23356789999996 5778999999999999999
Q ss_pred HhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCC-C--eeeCCCCCHHHHHHHHHHcCCceEEEEc
Q psy2372 255 LDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQP-P--LFIPETISTMQLLETFKKNKSELSLVID 331 (447)
Q Consensus 255 ~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~-~--~~V~~~~~l~~al~~m~~~~~~~a~VvD 331 (447)
.+++...+||+|++ ++++|+++.+|+++...... ...+.+.. . ..+.......+.++.+.+.+.+.+.|-.
T Consensus 203 ~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p~-----a~~D~~~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~ 276 (511)
T 3usb_A 203 QKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFPN-----SAKDKQGRLLVGAAVGVTADAMTRIDALVKASVDAIVLDT 276 (511)
T ss_dssp HHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-----CCBCTTSCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEEC
T ss_pred HHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhccc-----chhhhccceeeeeeeeeccchHHHHHHHHhhccceEEecc
Confidence 99999999999965 89999999999999875422 23333322 1 2344444556666777788888776654
Q ss_pred CCC
Q psy2372 332 EYG 334 (447)
Q Consensus 332 e~G 334 (447)
..|
T Consensus 277 a~g 279 (511)
T 3usb_A 277 AHG 279 (511)
T ss_dssp SCT
T ss_pred ccc
Confidence 444
No 131
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.49 E-value=8.3e-05 Score=71.36 Aligned_cols=61 Identities=16% Similarity=0.383 Sum_probs=53.6
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS 287 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~ 287 (447)
.+.+++++|++ ++.++++++++.++++.|.+++.+.+||+|++ |+++|+|+..|+++.+.+
T Consensus 197 ~~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 197 PRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TTCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC--
T ss_pred CCCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHHH
Confidence 56789999974 56789999999999999999999999999855 899999999999988754
No 132
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.44 E-value=0.0001 Score=71.22 Aligned_cols=61 Identities=18% Similarity=0.306 Sum_probs=54.6
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS 287 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~ 287 (447)
.+.+++++|++ ++.++++++++.++.+.|.+++.+.+||+|++ |+++|+|+.+|+++.+.+
T Consensus 199 ~~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 199 DDTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHHH
Confidence 46789999984 56789999999999999999999999999854 899999999999988754
No 133
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.40 E-value=9.1e-05 Score=77.05 Aligned_cols=62 Identities=15% Similarity=0.165 Sum_probs=0.0
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhH
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKII 286 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~ 286 (447)
.+.+++++|+|+.+++++++++++.++.+.|.+++...+||+|++ ++++|+|+.+|+++...
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhcc
Confidence 456899999976678899999999999999999999999999965 89999999999998753
No 134
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.25 E-value=0.00018 Score=74.84 Aligned_cols=63 Identities=24% Similarity=0.289 Sum_probs=5.2
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS 287 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~ 287 (447)
.+.+++++|+++.++.++++++++.++++.|.+++...+||+|++ ++++|+++.+|+++....
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~ 215 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEH 215 (494)
T ss_dssp ---------------------------------------------------------CHHHHTC
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhcc
Confidence 356899999976678899999999999999999999999999865 899999999999998653
No 135
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.25 E-value=0.00025 Score=73.39 Aligned_cols=61 Identities=16% Similarity=0.383 Sum_probs=54.9
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS 287 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~ 287 (447)
.+.+++++|++ ++.+++++++++++.+.|.+++...+||+|++ |+++|+|+.+|+++...+
T Consensus 217 ~~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 217 PRTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TTSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHH
T ss_pred CCCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHHHH
Confidence 56789999984 67799999999999999999999999999865 899999999999987654
No 136
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.15 E-value=0.00022 Score=76.54 Aligned_cols=56 Identities=5% Similarity=-0.025 Sum_probs=48.7
Q ss_pred eeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhH
Q psy2372 227 CAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKII 286 (447)
Q Consensus 227 ~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~ 286 (447)
+++++|++ ++.++++++++.|+.+.|.+++.+++||++ + |+++|+|+.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~ea~~~M~~~~i~~lpVve-~-G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVRQLHFLFVMLMPSMIYVTE-R-GKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHHHHHHHHHHTCCSEEEEEE-T-TEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHHHHHHHHHhcCCCEEEEEE-C-CEEEEEEehhhHHHHHh
Confidence 38899985 566999999999999999999999999994 4 89999999999998654
No 137
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.12 E-value=0.00015 Score=75.56 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=59.3
Q ss_pred CCCCHHHHHHHHHhchhc------------CccchHHHHHHhhhcccCceeeceeeeeCCceEEEcCCCCHHHHHHHHHh
Q psy2372 189 DLITEEEIYKLFREGFDI------------GIFNKIEYNLASRALKLDDQCAITLMTPRMKVNFINIDDNIEKNLIKILD 256 (447)
Q Consensus 189 ~~~s~~el~~lv~~~~~~------------g~l~~~E~~~i~~~l~l~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~ 256 (447)
+..|-+|...++....-+ |.++..+ +. . ..-.+.+++++|+|+.++++++++.++.++.+.|.+
T Consensus 104 ~~~tv~ea~~~m~~~~~s~~PVvd~~~~lvGiVt~rD--L~-~-~~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~ 179 (496)
T 4fxs_A 104 PEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRD--VR-F-VTDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHK 179 (496)
T ss_dssp SSSBHHHHHHHHTSSCCCEEEEECSSSBEEEEEEHHH--HT-T-CCCTTSBGGGTSEEGGGCCEEECC----CGGGTCC-
T ss_pred CCCCHHHHHHHHHHcCCcEEEEEccCCEEEEEEEHHH--Hh-h-cccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHH
Confidence 345677777777664322 4444333 21 1 123467899999987678899999999999999999
Q ss_pred CCCcEEEEEeCCCCeEEEEEEhhhHHHHh
Q psy2372 257 SSYNYFPVYKKSISKIIGTLNTKTLFKKI 285 (447)
Q Consensus 257 ~~~s~iPV~~~~~~~ivGiv~~~DLl~~~ 285 (447)
++...+||+|++ ++++|+|+.+|+++..
T Consensus 180 ~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 180 ARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp --CCCEEEECTT-SBCCEEECCC-----C
T ss_pred cCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 999999999965 8999999999999864
No 138
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.97 E-value=0.00031 Score=72.94 Aligned_cols=107 Identities=14% Similarity=0.189 Sum_probs=21.3
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHhCCCccCCChhhhcCCC
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIISNRSIVNIDITSAIQPP 303 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~~~~~~~~~v~~im~~~ 303 (447)
.+.+++++|++ ++.++++++++.++++.|.+++.+.+||+|++ ++++|+++.+|+++...... ...+.+...
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-----~~~~~~g~~ 219 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-----AVRDENGEL 219 (486)
T ss_dssp --------------------------------------------------------------CCTT-----CCBCTTSCB
T ss_pred CCCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-----cccccCCce
Confidence 35679999985 57789999999999999999999999999854 89999999999998754211 111111110
Q ss_pred ---eeeCCCCCHHHHHHHHHHcCCceEEEEcC-CCCEEEEEe
Q psy2372 304 ---LFIPETISTMQLLETFKKNKSELSLVIDE-YGELEGIIT 341 (447)
Q Consensus 304 ---~~V~~~~~l~~al~~m~~~~~~~a~VvDe-~G~~iGiVT 341 (447)
..++.+ + .+.+..+.+.+.+.. |+|. .|...++++
T Consensus 220 ~v~~~~~~~-~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L~ 258 (486)
T 2cu0_A 220 LVAAAVSPF-D-IKRAIELDKAGVDVI-VVDTAHAHNLKAIK 258 (486)
T ss_dssp CCEEEECTT-C-HHHHHHHHHTTCSEE-EEECSCCCCHHHHH
T ss_pred eecceechh-h-HHHHHHHHHhcCCce-EEEecCCcEeehhh
Confidence 123332 3 555677888888765 5553 455544443
No 139
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.89 E-value=0.0039 Score=64.64 Aligned_cols=62 Identities=15% Similarity=0.148 Sum_probs=54.9
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhHh
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKIIS 287 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~~ 287 (447)
.+.+++++|++ .++.++++++++.++++.|.+++...+||+|++ ++++|+++.+|+++....
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLETAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHHHHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHC
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhc
Confidence 46789999985 256789999999999999999999999999865 899999999999998764
No 140
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.52 E-value=0.00049 Score=71.95 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=42.9
Q ss_pred CceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHhH
Q psy2372 224 DDQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKII 286 (447)
Q Consensus 224 ~~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~~ 286 (447)
.+.+++++|+++.++.++++++++.++.+.|.+++...+||+|++ ++++|+++.+|+++...
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~ 232 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNRD 232 (514)
T ss_dssp ----------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHhh
Confidence 456799999975577899999999999999999999999999865 89999999999998653
No 141
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.49 E-value=0.00084 Score=69.42 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=0.0
Q ss_pred ceeeceeeeeCCceEEEcCCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEhhhHHHHh
Q psy2372 225 DQCAITLMTPRMKVNFINIDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNTKTLFKKI 285 (447)
Q Consensus 225 ~~~V~dvM~pr~~v~~v~~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~~DLl~~~ 285 (447)
+.+|+++|++ ++++++.+.+++|+.++|.+++...+||+|++ ++++|+|+.+|+.+..
T Consensus 199 ~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 199 ETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -------------------------------------------------------------
T ss_pred ceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccC-CcEEEEEEechhhhhh
Confidence 5689999995 68999999999999999999999999999965 8999999999998764
No 142
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=41.80 E-value=1.8e+02 Score=27.13 Aligned_cols=39 Identities=10% Similarity=0.043 Sum_probs=22.8
Q ss_pred HHHhhcchhHHHHHCHHHHHHHHhHHHHHHHHHHHHHHHHH
Q psy2372 130 LIFGELIPKRIAMQYSEKAASIISPLMLFLLKLMGPFVKIL 170 (447)
Q Consensus 130 lifgEiiPK~la~~~p~~~~~~~~~~l~~~~~i~~P~~~~~ 170 (447)
.++++. .|+...+ .-+-+......+..+.+.+||+.|.+
T Consensus 178 ~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~l 216 (274)
T 2jaf_A 178 ALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAV 216 (274)
T ss_dssp HHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344554 6655444 33333444444556677789999977
No 143
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=40.59 E-value=31 Score=27.19 Aligned_cols=25 Identities=12% Similarity=0.238 Sum_probs=21.9
Q ss_pred hcCCCCCCCcEEEEcCEEEEEEEee
Q psy2372 408 FLGHIPKISENFIWKNIKIEVIDMN 432 (447)
Q Consensus 408 ~lg~iP~~g~~~~~~~~~f~v~~~~ 432 (447)
--|+-|+.||++.|+|-.|.|.+-+
T Consensus 59 SsgYrP~r~D~Vv~~Gk~y~Vtr~~ 83 (102)
T 2pp6_A 59 SGNVIPRRGDRVVLRGSEFTVTRIR 83 (102)
T ss_dssp CSSCCCCTTCEEEETTEEEEEEEEE
T ss_pred cCCcccCCCCEEEEcCcEEEEEEEE
Confidence 5689999999999999999997654
No 144
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=37.75 E-value=56 Score=22.90 Aligned_cols=30 Identities=3% Similarity=0.025 Sum_probs=24.8
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCeE
Q psy2372 243 IDDNIEKNLIKILDSSYNYFPVYKKSISKI 272 (447)
Q Consensus 243 ~~~tl~e~~~~~~~~~~s~iPV~~~~~~~i 272 (447)
.-.|++||+..|...+|..+...|.+.+++
T Consensus 11 kpmsveEAv~qmel~gh~F~vF~n~~t~~~ 40 (57)
T 3k2t_A 11 KPMDSEEAVLQMNLLGHSFYVYTDAETNGT 40 (57)
T ss_dssp CCBCHHHHHHHHHHHTCSEEEEEBSSSCCE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCCCCE
Confidence 456899999999999999999888665544
No 145
>3ug9_A Archaeal-type opsin 1, archaeal-type opsin 2; microbialrhodopsin, seven-transmembrane, light-gated cation membrane protein; HET: RET OLA; 2.30A {Chlamydomonas reinhardtii}
Probab=33.02 E-value=3.4e+02 Score=26.07 Aligned_cols=23 Identities=22% Similarity=0.131 Sum_probs=15.6
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHH
Q psy2372 149 ASIISPLMLFLLKLMGPFVKILT 171 (447)
Q Consensus 149 ~~~~~~~l~~~~~i~~P~~~~~~ 171 (447)
+......+-.+.+.+||++|.+.
T Consensus 227 af~~Lr~~vlV~WaIYPIvW~Lg 249 (333)
T 3ug9_A 227 VVTGMAWLFFVSWGMFPILFILG 249 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhHHHeec
Confidence 33344455566788899999883
No 146
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=32.90 E-value=55 Score=24.57 Aligned_cols=26 Identities=19% Similarity=0.282 Sum_probs=21.6
Q ss_pred CceEEEEcCCCCEEEEEeHHHHHHHH
Q psy2372 324 SELSLVIDEYGELEGIITINDIIHSL 349 (447)
Q Consensus 324 ~~~a~VvDe~G~~iGiVT~~DIle~i 349 (447)
.+.+=|+|++|.-.|+++.++.++.-
T Consensus 13 ~~eVrli~~~Ge~lGv~~~~eAl~~A 38 (78)
T 1tif_A 13 AREVRLIDQNGDQLGIKSKQEALEIA 38 (78)
T ss_dssp CSEEEEECTTSCEEEEEEHHHHHHHH
T ss_pred CCEEEEECCCCcCCCcccHHHHHHHH
Confidence 34566899999999999999988754
No 147
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=31.71 E-value=84 Score=22.67 Aligned_cols=35 Identities=9% Similarity=0.112 Sum_probs=26.8
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEh
Q psy2372 243 IDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNT 278 (447)
Q Consensus 243 ~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~ 278 (447)
.-.|++||+..|.-.+++.+...|.+.++ +-+|+.
T Consensus 11 kpMsveEAv~qmel~gh~F~vF~n~etg~-~nVVYR 45 (65)
T 3ka5_A 11 KPMSEEEAVLEMELLGHNFFVFQNGDSNE-VNVVYK 45 (65)
T ss_dssp SCBCHHHHHHHHHHHTCSEEEEEETTTTE-EEEEEE
T ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCC-EEEEEE
Confidence 45689999999999999999988866444 444444
No 148
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=30.42 E-value=55 Score=24.04 Aligned_cols=24 Identities=17% Similarity=0.436 Sum_probs=20.6
Q ss_pred CCCcEEEEcC-EEEEEEEeecCeee
Q psy2372 414 KISENFIWKN-IKIEVIDMNNNKIE 437 (447)
Q Consensus 414 ~~g~~~~~~~-~~f~v~~~~~~ri~ 437 (447)
++||.+.+++ .+++|++++++.|+
T Consensus 7 k~GEsI~IGd~I~ItVl~v~g~~Vr 31 (70)
T 2jpp_A 7 KVGESINIGDDITITILGVSGQQVR 31 (70)
T ss_dssp ETTCEEEETTTEEEEEEEEETTEEE
T ss_pred cCCCeEEECCCEEEEEEEEeCCEEE
Confidence 5799999985 89999999998764
No 149
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=29.63 E-value=1.1e+02 Score=22.08 Aligned_cols=35 Identities=9% Similarity=0.052 Sum_probs=26.4
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEeCCCCeEEEEEEh
Q psy2372 243 IDDNIEKNLIKILDSSYNYFPVYKKSISKIIGTLNT 278 (447)
Q Consensus 243 ~~~tl~e~~~~~~~~~~s~iPV~~~~~~~ivGiv~~ 278 (447)
.-.|++||+..|.-.+++.+...|.+.|++ -+|+.
T Consensus 12 kpMsveEAv~qMel~gh~F~vF~n~etg~~-nVVYR 46 (66)
T 3lyv_A 12 KPMDVEEARLQMELLGHDFFIYTDSEDGAT-NILYR 46 (66)
T ss_dssp CEECHHHHHHHHHTTTCSEEEEEETTTCSE-EEEEE
T ss_pred CCCCHHHHHHHHHcCCCcEEEEEeCCCCCE-EEEEE
Confidence 345889999999999999999888665544 34443
No 150
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=28.63 E-value=63 Score=23.21 Aligned_cols=24 Identities=13% Similarity=0.531 Sum_probs=20.4
Q ss_pred CCCcEEEEcC-EEEEEEEeecCeee
Q psy2372 414 KISENFIWKN-IKIEVIDMNNNKIE 437 (447)
Q Consensus 414 ~~g~~~~~~~-~~f~v~~~~~~ri~ 437 (447)
++||.+.+++ .+++|++++++.|+
T Consensus 9 k~GE~I~Igd~I~I~Vl~i~g~~Vr 33 (63)
T 2bti_A 9 RVGETLMIGDEVTVTVLGVKGNQVR 33 (63)
T ss_dssp ETTCEEEETTTEEEEEEEEETTEEE
T ss_pred cCCCeEEeCCCEEEEEEEEeCCEEE
Confidence 5799999885 89999999998764
No 151
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=27.33 E-value=66 Score=23.80 Aligned_cols=24 Identities=13% Similarity=0.520 Sum_probs=20.8
Q ss_pred CCCcEEEEcC-EEEEEEEeecCeee
Q psy2372 414 KISENFIWKN-IKIEVIDMNNNKIE 437 (447)
Q Consensus 414 ~~g~~~~~~~-~~f~v~~~~~~ri~ 437 (447)
++||.+.+++ .+++|+++++..|+
T Consensus 19 K~GEsI~IGddI~ItVl~i~g~qVr 43 (73)
T 1vpz_A 19 RVGETLMVGDDVTVTVLGVKGNQVR 43 (73)
T ss_dssp ETTCEEEETTTEEEEEEEEETTEEE
T ss_pred cCCCEEEeCCCEEEEEEEEeCCEEE
Confidence 5799999986 89999999998764
No 152
>2l6x_A GPR, green-light absorbing proteorhodopsin; membrane protein structure, cell-free expre proton transport; HET: LYR; NMR {Uncultured marine gamma PROTEOBACTERIUEBAC31A08}
Probab=24.76 E-value=3.9e+02 Score=24.16 Aligned_cols=18 Identities=6% Similarity=-0.068 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy2372 154 PLMLFLLKLMGPFVKILT 171 (447)
Q Consensus 154 ~~l~~~~~i~~P~~~~~~ 171 (447)
..+..+.+.+||+.|.+.
T Consensus 173 ~~~~~v~W~iYPi~w~l~ 190 (243)
T 2l6x_A 173 MYIIIFGWAIYPVGYFTG 190 (243)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 344556777899999875
No 153
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=23.08 E-value=25 Score=25.79 Aligned_cols=28 Identities=7% Similarity=0.006 Sum_probs=20.1
Q ss_pred HHHHHHhCCCCCCCCcCCCCcccHhHHHHh
Q psy2372 378 DRFKELLSNQVNFPVKISRNYHTLAGFVMT 407 (447)
Q Consensus 378 ~~~~~~l~~~~~l~~~~~~~~~Tl~G~i~~ 407 (447)
..+++.||++ +|.++-.++.|++.++-.
T Consensus 46 ~~le~~fgi~--i~~~~~~~~~Tv~~l~~~ 73 (82)
T 2ava_A 46 MNLEEEFGIN--VDEDKAQDISTIQQAADV 73 (82)
T ss_dssp HHHHHHTTCC--CCGGGSSSCCSHHHHHHH
T ss_pred HHHHHHHCCc--cCHHHHHhCCCHHHHHHH
Confidence 3467889999 886544577898887643
No 154
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=22.31 E-value=58 Score=23.88 Aligned_cols=26 Identities=12% Similarity=0.235 Sum_probs=18.1
Q ss_pred HHHHHHhCCCCCCCCcC--CCCcccHhHHH
Q psy2372 378 DRFKELLSNQVNFPVKI--SRNYHTLAGFV 405 (447)
Q Consensus 378 ~~~~~~l~~~~~l~~~~--~~~~~Tl~G~i 405 (447)
..+++.||++ +|.++ ..++.|++.++
T Consensus 47 ~~lE~~fgi~--i~~~~l~~~~~~Tv~~l~ 74 (83)
T 2amw_A 47 TALEEYFDFS--VDDDEISAQTFETLGSLA 74 (83)
T ss_dssp HHHHHHTTCC--CCTTTCCGGGSSSHHHHH
T ss_pred HHHHHHhCCe--eCHHhhhHHhcCCHHHHH
Confidence 3468999999 88643 22378888765
No 155
>3qbg_A Halorhodopsin; membrane protein, ION pump, retinal, membrane; HET: RET BNG 22B; 1.80A {Natronomonas pharaonis} PDB: 3a7k_A* 3abw_A* 3qbi_A* 3qbk_A* 3qbl_A*
Probab=20.34 E-value=5.3e+02 Score=24.06 Aligned_cols=20 Identities=25% Similarity=0.177 Sum_probs=14.0
Q ss_pred HhHHHHHHHHHHHHHHHHHH
Q psy2372 152 ISPLMLFLLKLMGPFVKILT 171 (447)
Q Consensus 152 ~~~~l~~~~~i~~P~~~~~~ 171 (447)
....+..+.+.+||+.|.+.
T Consensus 213 ~L~~~v~v~W~iYPI~w~l~ 232 (291)
T 3qbg_A 213 TLKLLTVVMWLGYPIVWALG 232 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHS
T ss_pred HhHHHHHHHHHHHHHHHhhc
Confidence 33445566778899999873
Done!