BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2373
(358 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O34787|PKSE_BACSU Polyketide biosynthesis protein PksE OS=Bacillus subtilis (strain
168) GN=pksE PE=1 SV=3
Length = 767
Score = 300 bits (769), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 148/284 (52%), Positives = 196/284 (69%), Gaps = 4/284 (1%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPA 60
M TY+FPGQGSQ GMGQ LF+++ + ++++ ILGYSI++LC + S +N TEYTQPA
Sbjct: 1 MITYVFPGQGSQQKGMGQGLFEQYQHLTDQADQILGYSIEKLCTEKSYLDVNHTEYTQPA 60
Query: 61 LYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL 120
LY+VNALSY ++ TG DF GHSLGEYNAL +AG F FE GLRLV+KR +LM ++
Sbjct: 61 LYVVNALSYLKRVEETGRKPDFAAGHSLGEYNALMAAGAFDFETGLRLVKKRGELMGRIT 120
Query: 121 DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFE--KNN 178
G MAAVIG++ +++ +L+E+ L ID+AN NT QI+I+GPK +I A+ FE K+
Sbjct: 121 GGGMAAVIGLSKEQVTAVLEEHRLYDIDVANENTPQQIVISGPKKEIEKARAVFENTKDV 180
Query: 179 AIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNLSN 238
++ PLNVSG FHSRYM + F ++ F F IPVISN A PY +++ + LS
Sbjct: 181 KLFHPLNVSGAFHSRYMNEAKQVFKQYIDSFQFAPLAIPVISNVYAEPYHQDRLKDTLSE 240
Query: 239 HLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNE 282
+ N VKW DSI +L+ + EMEF EIGPGTVLT I IKNE
Sbjct: 241 QMDNTVKWTDSIRFLMG--RGEMEFAEIGPGTVLTGLIHRIKNE 282
>sp|A7Z4X8|BAEC_BACA2 Polyketide biosynthesis malonyl CoA-acyl carrier protein
transacylase BaeC OS=Bacillus amyloliquefaciens (strain
FZB42) GN=baeC PE=1 SV=1
Length = 289
Score = 291 bits (745), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 146/284 (51%), Positives = 197/284 (69%), Gaps = 4/284 (1%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPA 60
M TYLFPGQGSQ GMG LFD+F D+ E+++ LGYS+K LCL+N + L+KT++TQPA
Sbjct: 1 MITYLFPGQGSQKQGMGSSLFDEFKDLTEQADETLGYSMKRLCLENPYSNLHKTQFTQPA 60
Query: 61 LYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL 120
LY+VN LSY I++ D++ GHSLGEYNAL +AG F F GL+LV+KR +LMS
Sbjct: 61 LYVVNVLSYLKKIQDNDIKPDYVAGHSLGEYNALFAAGAFDFITGLQLVRKRGELMSMAT 120
Query: 121 DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFE--KNN 178
DG MAAV+G+ ++ + L+ + L+TIDIAN N+ +Q++I+G K DI A+ FE K+
Sbjct: 121 DGKMAAVMGLTAAQVSDALQTHGLHTIDIANMNSPHQVVISGRKEDIERAKSVFEGLKDV 180
Query: 179 AIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNLSN 238
++ PLNVSG FHSRYM ++F FL F F + +IPVISN A PY + I + L++
Sbjct: 181 TMFHPLNVSGAFHSRYMSEAKQEFEKFLQSFHFSAISIPVISNVHARPYEQDGIHSVLAD 240
Query: 239 HLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNE 282
+ + V+W DSI YLL+K + MEF E+GPG VLT I IKNE
Sbjct: 241 QIDHSVRWNDSIRYLLDKGR--MEFEEVGPGHVLTGLIHRIKNE 282
>sp|O34825|PKSC_BACSU Polyketide biosynthesis malonyl CoA-acyl carrier protein
transacylase PksC OS=Bacillus subtilis (strain 168)
GN=pksC PE=1 SV=1
Length = 288
Score = 285 bits (730), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/284 (51%), Positives = 194/284 (68%), Gaps = 4/284 (1%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPA 60
M TY+FPGQGSQ GMG LFD+F ++ ++++ ILGYSIK LCL+N + LNKT++TQPA
Sbjct: 1 MITYVFPGQGSQKQGMGSGLFDEFKELTDQADEILGYSIKRLCLENPYSNLNKTQFTQPA 60
Query: 61 LYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL 120
LY+VNALSY I++ DF+ GHSLGEYNAL +A F FE GL+LV+KR +LMS +
Sbjct: 61 LYVVNALSYLKKIRDEEVKPDFVAGHSLGEYNALFAAEAFDFETGLQLVRKRGELMSLIS 120
Query: 121 DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAI 180
+G MAAV+G+N +++ LKE +L+ +DIAN N QI+I+G K++I A FE +
Sbjct: 121 NGGMAAVMGLNEEQVAKALKEYHLHDVDIANVNAPYQIVISGKKDEIEKAASLFETMTEV 180
Query: 181 --YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNLSN 238
+PLNVSG FHSRYM ++F FL F F P+IPVISN A PY+ E + L++
Sbjct: 181 TMVLPLNVSGAFHSRYMNKAKEEFEEFLHAFYFSPPSIPVISNVYAKPYTYEFMKQTLAD 240
Query: 239 HLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNE 282
+ + VKW DSI YL+ K MEF E+GPG VLT I IK +
Sbjct: 241 QINHSVKWTDSISYLMK--KGHMEFEEVGPGNVLTGLIHRIKKD 282
>sp|A7Z4Y0|BAEE_BACA2 Polyketide biosynthesis protein BaeE OS=Bacillus amyloliquefaciens
(strain FZB42) GN=baeE PE=1 SV=1
Length = 746
Score = 285 bits (728), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/295 (48%), Positives = 199/295 (67%), Gaps = 9/295 (3%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPA 60
M +++FPGQGSQ +GMG+ LF ++P++ K+++ILGYSI+ELC + LN+T++TQPA
Sbjct: 1 MISFVFPGQGSQRIGMGEDLFGRYPELTAKADHILGYSIQELCRDGER--LNQTQFTQPA 58
Query: 61 LYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL 120
LY+VNALSY + TG DF GHSLGEYNAL ++G F FE+GL+LV+KR +LMS+
Sbjct: 59 LYVVNALSYLKKTEETGLKPDFTAGHSLGEYNALYASGAFDFEEGLQLVKKRGELMSRAK 118
Query: 121 DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAI 180
G MAAVIG+ ++++ ++L+EN+L+ IDIAN NT QI+I+G K DI A FE N +
Sbjct: 119 GGGMAAVIGLTHEQVTDVLRENHLDMIDIANMNTPQQIVISGYKEDIEKAASVFEAVNGV 178
Query: 181 YI--PLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNLSN 238
+ LNVSG FHSRYM ++F+ F+ F F +IPVISN A PY ++ L+
Sbjct: 179 KMVHRLNVSGAFHSRYMLEAKEEFSRFIESFHFKPLSIPVISNVTARPYEQRELKETLTG 238
Query: 239 HLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYKKDCVIKDDI 293
+ V W DSI +L+ + KN M F EIGPG VLT I+ I E + I D+I
Sbjct: 239 QITGSVNWTDSIRFLMGR-KN-MSFEEIGPGKVLTGLIQRITAEAEP---ITDEI 288
>sp|Q93QD4|FABD_STAAU Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus
aureus GN=fabD PE=3 SV=1
Length = 308
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 172/293 (58%), Gaps = 21/293 (7%)
Query: 5 LFPGQGSQYVGMGQLLF---DKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQG+Q VGM Q LF D+ +I+ + N L + I E + + +L +TE TQPAL
Sbjct: 7 IFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETENTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD 121
+ ++ + +KN DF +GHSLGEY++L +A V SFED +++V+KR +LM+Q
Sbjct: 67 -LTHSSALLAALKNLN--PDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFP 123
Query: 122 ---GAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
G+MAAV+G+++ K+ I K ++ I+ AN N QI+++G K I+ EK
Sbjct: 124 TGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDE---LVEK 180
Query: 177 NNAI----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231
++ +PL VSGPFHS MK I + F++++ F + PV+ N A + E
Sbjct: 181 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV 240
Query: 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
I +N+ L +PV++ +S +L+++ + F+EIGPG VL+ IK I + K
Sbjct: 241 IKSNMVKQLYSPVQFINSTEWLIDQGVD--HFIEIGPGKVLSGLIKKINRDVK 291
>sp|Q5HGK3|FABD_STAAC Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus
aureus (strain COL) GN=fabD PE=3 SV=1
Length = 308
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/293 (36%), Positives = 172/293 (58%), Gaps = 21/293 (7%)
Query: 5 LFPGQGSQYVGMGQLLF---DKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQG+Q VGM Q LF D+ +I+ + N L + I E + + +L +TE TQPAL
Sbjct: 7 IFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETENTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD 121
+ ++ + +KN DF +GHSLGEY++L +A V SFED +++V+KR +LM+Q
Sbjct: 67 -LTHSSALLAALKNLN--PDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFP 123
Query: 122 ---GAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
G+MAAV+G+++ K+ I K ++ I+ AN N QI+++G K I+ EK
Sbjct: 124 TGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDE---LVEK 180
Query: 177 NNAI----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231
++ +PL VSGPFHS MK I + F++++ F + PV+ N A + E
Sbjct: 181 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV 240
Query: 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
I +N+ L +PV++ +S +L+++ + F+EIGPG VL+ IK I + K
Sbjct: 241 IKSNMVKQLYSPVQFINSTEWLIDQGVD--HFIEIGPGKVLSGLIKKINRDVK 291
>sp|Q6GHK5|FABD_STAAR Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus
aureus (strain MRSA252) GN=fabD PE=3 SV=1
Length = 308
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 172/293 (58%), Gaps = 21/293 (7%)
Query: 5 LFPGQGSQYVGMGQLLF---DKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQG+Q VGM Q L+ D+ +I+ + N L + I E + + +L +TE TQPAL
Sbjct: 7 IFPGQGAQKVGMAQDLYNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETENTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD 121
+ ++ + +KN DF +GHSLGEY++L +A V SFED +++V+KR +LM+Q
Sbjct: 67 -LTHSSALLAALKNLN--PDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFP 123
Query: 122 ---GAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
G+MAAV+G+++ K+ I K ++ I+ AN N QI+++G K I+ EK
Sbjct: 124 SGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDE---LVEK 180
Query: 177 NNAI----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231
++ +PL VSGPFHS MK I + F++++ F + PV+ N A + E
Sbjct: 181 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV 240
Query: 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
I +N+ L +PV++ +S +L+++ + F+EIGPG VL+ IK I + K
Sbjct: 241 IKSNMVKQLYSPVQFINSTEWLIDQGVD--HFIEIGPGKVLSGLIKKINRDVK 291
>sp|Q7A124|FABD_STAAW Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus
aureus (strain MW2) GN=fabD PE=3 SV=1
Length = 308
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 171/293 (58%), Gaps = 21/293 (7%)
Query: 5 LFPGQGSQYVGMGQLLF---DKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQG+Q VGM Q LF D+ +I+ + L + I E + + +L +TE TQPAL
Sbjct: 7 IFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD 121
+ ++ + +KN DF +GHSLGEY++L +A V SFED +++V+KR +LM+Q
Sbjct: 67 -LTHSSALLAALKNLN--PDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFP 123
Query: 122 ---GAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
G+MAAV+G+++ K+ I K ++ I+ AN N QI+++G K I+ EK
Sbjct: 124 TGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDE---LVEK 180
Query: 177 NNAI----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231
++ +PL VSGPFHS MK I + F++++ F + PV+ N A + E
Sbjct: 181 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV 240
Query: 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
I +N+ L +PV++ +S +L+++ + F+EIGPG VL+ IK I + K
Sbjct: 241 IKSNMVKQLYSPVQFINSTEWLIDQGVD--HFIEIGPGKVLSGLIKKINRDVK 291
>sp|Q7A5Z3|FABD_STAAN Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus
aureus (strain N315) GN=fabD PE=1 SV=1
Length = 308
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 171/293 (58%), Gaps = 21/293 (7%)
Query: 5 LFPGQGSQYVGMGQLLF---DKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQG+Q VGM Q LF D+ +I+ + L + I E + + +L +TE TQPAL
Sbjct: 7 IFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD 121
+ ++ + +KN DF +GHSLGEY++L +A V SFED +++V+KR +LM+Q
Sbjct: 67 -LTHSSALLAALKNLN--PDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFP 123
Query: 122 ---GAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
G+MAAV+G+++ K+ I K ++ I+ AN N QI+++G K I+ EK
Sbjct: 124 TGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDE---LVEK 180
Query: 177 NNAI----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231
++ +PL VSGPFHS MK I + F++++ F + PV+ N A + E
Sbjct: 181 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV 240
Query: 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
I +N+ L +PV++ +S +L+++ + F+EIGPG VL+ IK I + K
Sbjct: 241 IKSNMVKQLYSPVQFINSTEWLIDQGVD--HFIEIGPGKVLSGLIKKINRDVK 291
>sp|Q99UN8|FABD_STAAM Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=fabD PE=1 SV=1
Length = 308
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 171/293 (58%), Gaps = 21/293 (7%)
Query: 5 LFPGQGSQYVGMGQLLF---DKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQG+Q VGM Q LF D+ +I+ + L + I E + + +L +TE TQPAL
Sbjct: 7 IFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD 121
+ ++ + +KN DF +GHSLGEY++L +A V SFED +++V+KR +LM+Q
Sbjct: 67 -LTHSSALLAALKNLN--PDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFP 123
Query: 122 ---GAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
G+MAAV+G+++ K+ I K ++ I+ AN N QI+++G K I+ EK
Sbjct: 124 TGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDE---LVEK 180
Query: 177 NNAI----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231
++ +PL VSGPFHS MK I + F++++ F + PV+ N A + E
Sbjct: 181 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV 240
Query: 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
I +N+ L +PV++ +S +L+++ + F+EIGPG VL+ IK I + K
Sbjct: 241 IKSNMVKQLYSPVQFINSTEWLIDQGVD--HFIEIGPGKVLSGLIKKINRDVK 291
>sp|P71019|FABD_BACSU Malonyl CoA-acyl carrier protein transacylase OS=Bacillus subtilis
(strain 168) GN=fabD PE=3 SV=2
Length = 317
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 17/305 (5%)
Query: 3 TYLFPGQGSQYVGMGQLLFDKFP---DIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQP 59
+LFPGQGSQ++GMG+ L+++ P + ++++ L + L + +L T QP
Sbjct: 5 AFLFPGQGSQFIGMGKELYEQVPAAKRLFDEADETLETKLSSLIFEGDAEELTLTYNAQP 64
Query: 60 ALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV 119
AL + +++ + K +G DF GHSLGEY+AL +AG SF+D + V+KR + M++
Sbjct: 65 AL-LTTSIAVLEKFKESGITPDFTAGHSLGEYSALVAAGALSFKDAVYTVRKRGEFMNEA 123
Query: 120 L---DGAMAAVIGIN---YKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIF 173
+ +GAMAA++G++ K++ + + E N + +AN N QI+I+G + A
Sbjct: 124 VPAGEGAMAAILGMDAEALKQVTDKVTEEG-NLVQLANLNCPGQIVISGTAKGVELASEL 182
Query: 174 FEKNNA-IYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEK- 231
++N A IPL VSGPFHS MKP +K L ++PVISN A EK
Sbjct: 183 AKENGAKRAIPLEVSGPFHSELMKPAAEKLKEVLDACDIKDADVPVISNVSA-DVMTEKA 241
Query: 232 -ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYKKDCVIK 290
I L L +PV++ +SI L+ ++ F+EIGPG VL+ +K + K V
Sbjct: 242 DIKEKLIEQLYSPVRFEESINKLI--AEGVTTFIEIGPGKVLSGLVKKVNRRLKTIAVSD 299
Query: 291 DDILE 295
+ +E
Sbjct: 300 PETIE 304
>sp|Q9R9J2|FENF_BACIU Malonyl CoA-acyl carrier protein transacylase OS=Bacillus subtilis
GN=fenF PE=1 SV=1
Length = 400
Score = 172 bits (436), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 161/289 (55%), Gaps = 13/289 (4%)
Query: 3 TYLFPGQGSQYVGMGQLLFDKF---PDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQP 59
+LFPGQGSQ+VGMG+ ++ F + E++++ + +K+LC +L +T QP
Sbjct: 5 AFLFPGQGSQFVGMGKSFWNDFVLAKRLFEEASDAISMDVKKLCFDGDMTELTRTMNAQP 64
Query: 60 ALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV 119
A+ V+ ++Y+ +++ G FL GHSLGEY+AL AGV SF++ ++L+++R LM Q
Sbjct: 65 AILTVSVIAYQVYMQEIGIKPHFLAGHSLGEYSALVCAGVLSFQEAVKLIRQRGILM-QN 123
Query: 120 LD----GAMAAVIGINYKKILNILKENNLN--TIDIANYNTLNQIIIAGPKNDINNAQIF 173
D G MAA+ + + + ++ E + + +A N+ Q +I+G + +
Sbjct: 124 ADPEQLGTMAAITQVYIQPLQDLCTEISTEDFPVGVACMNSDQQHVISGHRQAVEFVIKK 183
Query: 174 FEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPY-SIEKI 232
E+ A + LNVS PFHS M+ ++F L + F P+ISN A+PY + +
Sbjct: 184 AERMGANHTYLNVSAPFHSSMMRSASEQFQTALNQYSFRDAEWPIISNVTAIPYNNGHSV 243
Query: 233 TNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKN 281
+L H+ PV+W +S++YLL E+ +E+GP VL +K I N
Sbjct: 244 REHLQTHMTMPVRWAESMHYLLLHGVTEV--IEMGPKNVLVGLLKKITN 290
>sp|Q6G9Y3|FABD_STAAS Malonyl CoA-acyl carrier protein transacylase OS=Staphylococcus
aureus (strain MSSA476) GN=fabD PE=3 SV=1
Length = 308
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 171/293 (58%), Gaps = 21/293 (7%)
Query: 5 LFPGQGSQYVGMGQLLF---DKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQG+Q VGM Q LF D+ +I+ + L + I E + + +L +TE TQPAL
Sbjct: 7 IFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETENTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD 121
+ ++ + +KN DF +GHSLGEY++L +A V SFED +++V+KR +LM+Q
Sbjct: 67 -LTHSSALLAALKNLN--PDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQAFP 123
Query: 122 ---GAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
G+MAAV+G+++ K+ I K ++ I+ AN N QI+++G K I+ EK
Sbjct: 124 TGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDE---LVEK 180
Query: 177 NNAI----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231
++ +PL VSGPFHS MK I + F++++ F + PV+ N A + E
Sbjct: 181 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDNEV 240
Query: 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
I +N+ L +PV++ +S +L+++ + F+EIGPG VL+ IK I + K
Sbjct: 241 IKSNMVKQLYSPVQFINSTEWLIDQGVD--HFIEIGPGKVLSGLIKKINRDVK 291
>sp|P0AAI9|FABD_ECOLI Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli
(strain K12) GN=fabD PE=1 SV=2
Length = 309
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 144/286 (50%), Gaps = 11/286 (3%)
Query: 3 TYLFPGQGSQYVGMGQLLFDKFPDIIE---KSNNILGYSIKELCLKNSKNQLNKTEYTQP 59
++FPGQGSQ VGM + +P + E +++ LGY + L + +LNKT TQP
Sbjct: 5 AFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQP 64
Query: 60 ALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV 119
AL + YR + G+ + GHSLGEY+AL AGV F D +RLV+ R K M +
Sbjct: 65 ALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEA 124
Query: 120 L---DGAMAAVIGINYKKILNILKE-NNLNTIDIANYNTLNQIIIAGPKNDIN-NAQIFF 174
+ GAMAA+IG++ I +E + N+N+ Q++IAG K +
Sbjct: 125 VPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACK 184
Query: 175 EKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEA-LPYSIEKIT 233
+PL VS P H MKP K L F++P +PV++N + + + I
Sbjct: 185 AAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIR 244
Query: 234 NNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSI 279
+ L L NPV+W S+ Y+ + + E+GPG VLT K I
Sbjct: 245 DALVRQLYNPVQWTKSVEYMAAQGVEHL--YEVGPGKVLTGLTKRI 288
>sp|P0AAJ0|FABD_ECOL6 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fabD PE=3
SV=2
Length = 309
Score = 166 bits (420), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 144/286 (50%), Gaps = 11/286 (3%)
Query: 3 TYLFPGQGSQYVGMGQLLFDKFPDIIE---KSNNILGYSIKELCLKNSKNQLNKTEYTQP 59
++FPGQGSQ VGM + +P + E +++ LGY + L + +LNKT TQP
Sbjct: 5 AFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQP 64
Query: 60 ALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV 119
AL + YR + G+ + GHSLGEY+AL AGV F D +RLV+ R K M +
Sbjct: 65 ALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEA 124
Query: 120 L---DGAMAAVIGINYKKILNILKE-NNLNTIDIANYNTLNQIIIAGPKNDIN-NAQIFF 174
+ GAMAA+IG++ I +E + N+N+ Q++IAG K +
Sbjct: 125 VPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACK 184
Query: 175 EKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEA-LPYSIEKIT 233
+PL VS P H MKP K L F++P +PV++N + + + I
Sbjct: 185 AAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIR 244
Query: 234 NNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSI 279
+ L L NPV+W S+ Y+ + + E+GPG VLT K I
Sbjct: 245 DALVRQLYNPVQWTKSVEYMAAQGVEHL--YEVGPGKVLTGLTKRI 288
>sp|Q8X8I7|FABD_ECO57 Malonyl CoA-acyl carrier protein transacylase OS=Escherichia coli
O157:H7 GN=fabD PE=3 SV=3
Length = 309
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 145/286 (50%), Gaps = 11/286 (3%)
Query: 3 TYLFPGQGSQYVGMGQLLFDKFPDIIE---KSNNILGYSIKELCLKNSKNQLNKTEYTQP 59
++FPGQGSQ VGM + +P + E +++ LGY + L + +LNKT TQP
Sbjct: 5 AFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQP 64
Query: 60 ALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV 119
AL + YR ++ G+ + GHSLGEY+AL AGV F D +RLV+ R K M +
Sbjct: 65 ALLTASVALYRVWQQHGGKAPAMMAGHSLGEYSALVCAGVIDFADAVRLVEMRGKFMQEA 124
Query: 120 L---DGAMAAVIGINYKKILNILKE-NNLNTIDIANYNTLNQIIIAGPKNDIN-NAQIFF 174
+ GAMAA+IG++ I +E + N+N+ Q++IAG K +
Sbjct: 125 VPEGTGAMAAIIGLDDASIGKACEEAAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACK 184
Query: 175 EKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEA-LPYSIEKIT 233
+PL VS P H MKP K L F++P +PV++N + + + I
Sbjct: 185 AAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFNAPTVPVVNNVDVKCETNGDAIR 244
Query: 234 NNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSI 279
+ L L NPV+W S+ Y+ + + E+GPG VLT K I
Sbjct: 245 DALVRQLYNPVQWTKSVEYMAAQGVEHL--YEVGPGKVLTGLTKRI 288
>sp|O85140|FABD_SALTY Malonyl CoA-acyl carrier protein transacylase OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=fabD PE=1 SV=3
Length = 309
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 142/286 (49%), Gaps = 11/286 (3%)
Query: 3 TYLFPGQGSQYVGMGQLLFDKFPDIIE---KSNNILGYSIKELCLKNSKNQLNKTEYTQP 59
++FPGQGSQ VGM + +P + E +++ LGY + L + +LNKT TQP
Sbjct: 5 AFVFPGQGSQSVGMLAEMAANYPIVEETFAEASAALGYDLWALTQQGPAEELNKTWQTQP 64
Query: 60 ALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV 119
AL + +R + G+ + GHSLGEY+AL AGV +F D +RLV+ R K M +
Sbjct: 65 ALLTASVALWRVWQQQGGKMPALMAGHSLGEYSALVCAGVINFADAVRLVEMRGKFMQEA 124
Query: 120 L---DGAMAAVIGINYKKILNILKEN-NLNTIDIANYNTLNQIIIAGPKNDIN-NAQIFF 174
+ G M+A+IG++ I +E+ + N+N+ Q++IAG K +
Sbjct: 125 VPEGTGGMSAIIGLDDASIAKACEESAEGQVVSPVNFNSPGQVVIAGHKEAVERAGAACK 184
Query: 175 EKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEA-LPYSIEKIT 233
+PL VS P H MKP K L F +P +PV++N + I
Sbjct: 185 AAGAKRALPLPVSVPSHCALMKPAADKLAVELAKITFSAPTVPVVNNVDVKCETDAAAIR 244
Query: 234 NNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSI 279
+ L L NPV+W S+ ++ + + E+GPG VLT K I
Sbjct: 245 DALVRQLYNPVQWTKSVEFIAAQGVEHL--YEVGPGKVLTGLTKRI 288
>sp|P73242|FABD_SYNY3 Malonyl CoA-acyl carrier protein transacylase OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=fabD PE=3 SV=1
Length = 293
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 154/281 (54%), Gaps = 12/281 (4%)
Query: 1 MKT-YLFPGQGSQYVGMGQLLFDKF--PDIIEKSNNILGYSIKELCLKNSKNQLNKTEYT 57
MKT ++FPGQGSQ VGMG L + +++ ILG+S+ E C + + L T+ T
Sbjct: 1 MKTAWVFPGQGSQAVGMGVDLLSTAIAKEKYQQAEEILGWSVVEKC-QGDEASLALTQNT 59
Query: 58 QPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMS 117
QP LY++ A+ D +++ G D++ GHSLGEY+AL +AGVF F GL+LV++RS++M+
Sbjct: 60 QPCLYVIEAI-LADLLRDKGFQPDYVAGHSLGEYSALYAAGVFDFATGLQLVKQRSEVMA 118
Query: 118 QVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177
G MAA++ + ++ L +N + +AN N+ Q++I+G + +
Sbjct: 119 SASGGMMAALMKFDQTQLQQALTDN--TEVVLANDNSPEQVVISGTVAGVEAILANVKAR 176
Query: 178 NAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYS-IEKITNNL 236
A +PL VSG FHS +M + F L F+ +PV+SN + P +++ L
Sbjct: 177 RA--VPLKVSGAFHSSFMAQPSQSFAQTLTACHFNDATVPVLSNVDPSPTQNGDRLKEKL 234
Query: 237 SNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIK 277
+ V+W +++ L ++ E+GPG VLT K
Sbjct: 235 IQQMTGSVRWRETMVNL--GEIGATDYWEVGPGKVLTGLCK 273
>sp|P43712|FABD_HAEIN Malonyl CoA-acyl carrier protein transacylase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=fabD PE=3 SV=1
Length = 312
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/290 (33%), Positives = 153/290 (52%), Gaps = 12/290 (4%)
Query: 5 LFPGQGSQYVGMGQLLFDKFPDIIE---KSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
+FPGQGSQ VGM L ++P +IE ++++ LGY + L + +LNKT TQPAL
Sbjct: 7 VFPGQGSQTVGMLADLATEYPIVIETFKQASDALGYDLWYLVQQGPAEELNKTWQTQPAL 66
Query: 62 YIVNALSYRDHIKNTGEY-ADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL 120
+ YR + + + + GHSLGEY+AL AGV F+D ++LV+ R KLM Q +
Sbjct: 67 LAASVAIYRVWKEKFPQLKPEVMAGHSLGEYSALVCAGVLDFQDAIKLVELRGKLMQQAV 126
Query: 121 ---DGAMAAVIGINYKKILNILKE-NNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
GAM A+IG++ + I+N K+ + N+N+ Q++IAG K + A ++
Sbjct: 127 PEGTGAMYAIIGLDNEAIINACKQAEEGEVVSAVNFNSPGQVVIAGAKAAVERAAALCKE 186
Query: 177 NNA-IYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EKITN 234
A +PL VS P H MKP ++ L + ++P I V++N + + +I
Sbjct: 187 AGAKRALPLAVSVPSHCALMKPAAEQLAVTLENIQINTPTISVLNNVDVKAETEGTEIRT 246
Query: 235 NLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284
L L +PV+W +++ + + E+GPG VL K I + +
Sbjct: 247 ALVRQLYSPVRWTETVEKM--AQDGVLVLAEVGPGKVLNGLTKRIVGDLQ 294
>sp|Q8K9J6|FABD_BUCAP Malonyl CoA-acyl carrier protein transacylase OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=fabD PE=3 SV=1
Length = 310
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/282 (32%), Positives = 145/282 (51%), Gaps = 11/282 (3%)
Query: 5 LFPGQGSQYVGMGQLLFDK----FPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPA 60
LFPGQGSQY M F K F I ++++ + Y++ L +K + + +Y Q A
Sbjct: 7 LFPGQGSQYKNMLSSFFQKKNNLFKKIFDEASEYVNYNLLNLIKNGAKKKRDDYKYIQSA 66
Query: 61 LYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL 120
+ + Y+ + G + GHSLGEY+AL A F D L++V+ RSKLM +++
Sbjct: 67 ILTSSIAIYQLWKEKNGRRPALMSGHSLGEYSALVCANAIKFSDALKIVKLRSKLMQKII 126
Query: 121 ---DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177
+ A+IG++ I NI + + IA+ N+ +QIII+G K + + +K
Sbjct: 127 INKPSLVQAIIGLDKVIIKNICLQYLPKIVSIASINSDDQIIISGEKLAVREVGLKCKKK 186
Query: 178 NAIY-IPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIE-KITNN 235
A Y I LN++ P HS+ MKP+ ++ L SP IPVI+N + + E KI
Sbjct: 187 GAKYVIKLNINTPIHSQLMKPVSEQIKYLLKSIKIKSPQIPVINNVDVICEKNEKKIKKA 246
Query: 236 LSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIK 277
L + V+W + I + KSK +EIGP +L+ IK
Sbjct: 247 LVRQFYSTVRWKEIIDLI--KSKKIFTMLEIGPNKILSNLIK 286
>sp|Q8T3L6|FABD_DROME Probable malonyl-CoA-acyl carrier protein transacylase,
mitochondrial OS=Drosophila melanogaster GN=beg PE=2
SV=2
Length = 379
Score = 118 bits (295), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 142/303 (46%), Gaps = 35/303 (11%)
Query: 5 LFPGQGSQYVGMGQLLFDKFPD---IIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
LFPGQG+QYVGM + L +FP I E +N +L Y + ++CL+ + +LN+TE+ Q A+
Sbjct: 71 LFPGQGTQYVGMAKDLL-RFPGARRIFELANEVLKYDLLKICLEGPREKLNRTEHAQLAV 129
Query: 62 YIVNALSYRDHIKNTG----EYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMS 117
+V++L+ + ++ E G SLGE AL A F+ LRLVQ R+ M
Sbjct: 130 -MVSSLAALEQLREERPKAIETCVAAAGFSLGEITALVYADALPFDKALRLVQVRATAMQ 188
Query: 118 QVLD---GAMAAV-------IGINYKKILNILKENNLNT--IDIANYNTLNQIIIAGPKN 165
D GAMA +G + + + + IANY + ++AG
Sbjct: 189 AACDQAAGAMAMTLYGPDTNLGEACARAQQWCLDKGVESPYCGIANYMYPHCKVVAGNVE 248
Query: 166 DINNAQIFFEKNNAIY-----IPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVIS 220
+ F E+N + L VSG FH+ M+ + F L P I V S
Sbjct: 249 ALE----FLEQNAKSFKIRRMKRLAVSGAFHTPLMQSAVEPFTKALKTVRLQDPVIRVYS 304
Query: 221 NFEALPYSIEK-ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEF---MEIGPGTVLTKFI 276
N + PY K I L ++ PVKW +++ + + K ++F E GPG L + +
Sbjct: 305 NVDGKPYRHAKHILTQLPKQIVRPVKWEQTLHEMYER-KQGVDFPRTFECGPGKGLVQVL 363
Query: 277 KSI 279
+ +
Sbjct: 364 EKV 366
>sp|Q8IVS2|FABD_HUMAN Malonyl-CoA-acyl carrier protein transacylase, mitochondrial
OS=Homo sapiens GN=MCAT PE=1 SV=2
Length = 390
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 31/301 (10%)
Query: 5 LFPGQGSQYVGMGQLLFDKFPDIIE---KSNNILGYSIKELCLKNSKNQLNKTEYTQPAL 61
LFPGQGSQ VGMG+ L + +P + E + +LGY + EL L + L++T + QPA+
Sbjct: 66 LFPGQGSQVVGMGRGLLN-YPRVRELYAAARRVLGYDLLELSLHGPQETLDRTVHCQPAI 124
Query: 62 YIVN--ALSYRDHIKNTG-EYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLM-- 116
++ + A+ H++ + E G S+GE+ AL AG F +GL V+ R++ M
Sbjct: 125 FVASLAAVEKLHHLQPSVIENCVAAAGFSVGEFAALVFAGAMEFAEGLYAVKIRAEAMQE 184
Query: 117 -SQVLDGAMAAVIGINYKKILNILKENNLNT---------IDIANYNTLNQIIIAGPKND 166
S+ + M +V+G K E + +++NY + +I+G +
Sbjct: 185 ASEAVPSGMLSVLGQPQSKFNFACLEAREHCKSLGIENPVCEVSNYLFPDCRVISGHQEA 244
Query: 167 I-----NNAQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISN 221
+ N+++ F + L VSG FH+R M+P + L P + V SN
Sbjct: 245 LRFLQKNSSKFHFRRTRM----LPVSGAFHTRLMEPAVEPLTQALKAVDIKKPLVSVYSN 300
Query: 222 FEALPYSIE-KITNNLSNHLINPVKWFDSIYYLLNKSKNE--MEFMEIGPGTVLTKFIKS 278
A Y I L+ L++PVKW +++ + + K + E+GPG L +KS
Sbjct: 301 VHAHRYRHPGHIHKLLAQQLVSPVKWEQTMHAIYERKKGRGFPQTFEVGPGRQLGAILKS 360
Query: 279 I 279
Sbjct: 361 C 361
>sp|Q8R3F5|FABD_MOUSE Malonyl-CoA-acyl carrier protein transacylase, mitochondrial OS=Mus
musculus GN=Mcat PE=2 SV=3
Length = 381
Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 31/308 (10%)
Query: 5 LFPGQGSQYVGMGQ--LLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPALY 62
LFPGQG Q VGMG L + + E ++ +LGY + ELCL+ + L++T + QPA++
Sbjct: 64 LFPGQGCQAVGMGSGLLHLPRVRQLYEAAHRVLGYDLLELCLRGPQEDLDRTVHCQPAVF 123
Query: 63 IVN--ALSYRDHIKNTG-EYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLM--- 116
+ + A+ H++ + G S+GE+ AL AG F +GL V+ R++ M
Sbjct: 124 VASLAAVEKLHHLQPAVIDNCVAAAGFSVGEFAALVFAGAMDFSEGLYAVKARAEAMQEA 183
Query: 117 SQVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQI---------IIAGPKNDI 167
S+ + M +V+G E + + N + Q+ +I+G +
Sbjct: 184 SEAVPSGMLSVLGQRQSNFSFACLEAQEHCKSLGIENPVCQVSNYLFPDCRVISGHLEAL 243
Query: 168 NNAQIFFEKNNAIYI-----PLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNF 222
F +N+A Y L VSG FH+ M+P L P + V SN
Sbjct: 244 Q----FLRRNSAKYHFRRTKMLPVSGGFHTCLMEPAVDPLMKVLGSINIKKPLVAVHSNV 299
Query: 223 EALPYS-IEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEF---MEIGPGTVLTKFIKS 278
Y+ + I L +++PVKW +++ + + K MEF E+GPG L +K
Sbjct: 300 SGQKYTHPQHIRKLLGQQVVSPVKWEQTMHSIYERKKG-MEFPSTYEVGPGQQLGSILKC 358
Query: 279 IKNEYKKD 286
+ K
Sbjct: 359 CNRQAWKS 366
>sp|Q89AH0|FABD_BUCBP Malonyl CoA-acyl carrier protein transacylase OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=fabD PE=3 SV=1
Length = 311
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 140/290 (48%), Gaps = 19/290 (6%)
Query: 3 TYLFPGQGSQYVGMGQLL---FDK---FPDIIEKSNNILGYSIKELCLKNSKNQLNKTEY 56
T LFPGQ + ++L F K I +S+ +GY I +L + K +L +Y
Sbjct: 5 TLLFPGQND--INRKKILSPFFSKNKIVQSIFRESSEYIGYDIWKLIQDDPKKKLKNNKY 62
Query: 57 TQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLM 116
+Q + + Y + + ++GHSLGEY AL + D ++L+ R K M
Sbjct: 63 SQLVTLVSSIAIYELWKNKQCTHPNLVIGHSLGEYTALVCSQSLKLSDAIQLIITRYKFM 122
Query: 117 SQVLD---GAMAAVIGINYKKILNILKENNL-NTIDIANYNTLNQIIIAGPKNDINNAQI 172
+ + G M A+IG+N + I +LK+ + + + IA NT NQI+++G +N + + +
Sbjct: 123 MEAMSKKIGLMTAIIGLNERTIRKLLKKYDYSHEVSIACINTDNQIVLSGERNSVKHINL 182
Query: 173 FFEKNNAI-YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPY--SI 229
+K A I L + P H MK KK L F P PVIS+ +L + S
Sbjct: 183 HCKKAGAKNIINLYIHPPSHCTLMKKASKKLLYVLKHTTFKIPIYPVISS-TSLKFQNSE 241
Query: 230 EKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSI 279
+ I +L+ + + V+W I Y+ K+ F+E+ ++LT K+I
Sbjct: 242 QAIRISLAKQIYSTVRWNSIIKYI---KKDIFIFLEVSTKSILTNLNKNI 288
>sp|Q7TXK8|MSL7_MYCBO Phenolphthiocerol synthesis polyketide synthase type I Pks15/1
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=pks15/1 PE=1 SV=1
Length = 2112
Score = 97.8 bits (242), Expect = 1e-19, Method: Composition-based stats.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 31/289 (10%)
Query: 5 LFPGQGSQYVGMGQLLFDKFP-------DIIEKSNNILGYSIKELCLKNSKNQLNKTEYT 57
+FPGQG+Q +GMG+ L+ + P + ++ + L ++++ + L+ TE+
Sbjct: 582 VFPGQGAQRIGMGRELYGELPVFAQAFDAVADELDRHLRLPLRDVIWGADADLLDSTEFA 641
Query: 58 QPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMS 117
QPAL+ V S+ +++ G DF++GHS+GE A +AGV + D LV R +LM
Sbjct: 642 QPALFAVEVASFA-VLRDWGVLPDFVMGHSVGELAAAHAAGVLTLADAAMLVVARGRLMQ 700
Query: 118 QVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177
+ G + + ++ +L E + IA N ++I+G + N F
Sbjct: 701 ALPAGGAMVAVAASEDEVEPLLGEG----VGIAAINAPESVVISGAQAAANAIADRFAAQ 756
Query: 178 NAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISN---------FEALPYS 228
L VS FHS M+P+ ++F P + ++SN F + Y
Sbjct: 757 GRRVHQLAVSHAFHSPLMEPMLEEFARVAARVQAREPQLGLVSNVTGELAGPDFGSAQYW 816
Query: 229 IEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIK 277
++ H+ PV++ DS +L ++ F+E GPG+ LT I+
Sbjct: 817 VD--------HVRRPVRFADSARHL--QTLGATHFIEAGPGSGLTGSIE 855
>sp|P96285|PKS1_MYCTU Putative inactive phenolphthiocerol synthesis polyketide synthase
type I Pks1 OS=Mycobacterium tuberculosis GN=pks1 PE=3
SV=4
Length = 1616
Score = 97.8 bits (242), Expect = 1e-19, Method: Composition-based stats.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 31/289 (10%)
Query: 5 LFPGQGSQYVGMGQLLFDKFP-------DIIEKSNNILGYSIKELCLKNSKNQLNKTEYT 57
+FPGQG+Q +GMG+ L+ + P + ++ + L ++++ + L+ TE+
Sbjct: 86 VFPGQGAQRIGMGRELYGELPVFAQAFDAVADELDRHLRLPLRDVIWGADADLLDSTEFA 145
Query: 58 QPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMS 117
QPAL+ V S+ +++ G DF++GHS+GE A +AGV + D LV R +LM
Sbjct: 146 QPALFAVEVASFA-VLRDWGVLPDFVMGHSVGELAAAHAAGVLTLADAAMLVVARGRLMQ 204
Query: 118 QVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177
+ G + + ++ +L E + IA N ++I+G + N F
Sbjct: 205 ALPAGGAMVAVAASEDEVEPLLGEG----VGIAAINAPESVVISGAQAAANAIADRFAAQ 260
Query: 178 NAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISN---------FEALPYS 228
L VS FHS M+P+ ++F P + ++SN F + Y
Sbjct: 261 GRRVHQLAVSHAFHSPLMEPMLEEFARVAARVQAREPQLGLVSNVTGELAGPDFGSAQYW 320
Query: 229 IEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIK 277
++ H+ PV++ DS +L ++ F+E GPG+ LT I+
Sbjct: 321 VD--------HVRRPVRFADSARHL--QTLGATHFIEAGPGSGLTGSIE 359
>sp|B2HIL7|MSL7_MYCMM Phenolphthiocerol synthesis polyketide synthase type I Pks15/1
OS=Mycobacterium marinum (strain ATCC BAA-535 / M)
GN=pks15/1 PE=1 SV=1
Length = 2104
Score = 95.9 bits (237), Expect = 5e-19, Method: Composition-based stats.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 33/291 (11%)
Query: 5 LFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNKTEYT 57
+FPGQGSQ +GM + L D+ P E + + L ++E+ + L+ TE+
Sbjct: 574 VFPGQGSQRIGMARELHDQLPVFAEAFDAVADELDRHLRIPLREVMWGSDAALLDSTEFA 633
Query: 58 QPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMS 117
QPAL+ V + ++ G DF++GHS+GE +A AGV + D LV R +LM
Sbjct: 634 QPALFAVEVALFA-ALQRWGLQPDFVMGHSVGELSAAYVAGVLTLADAAMLVVARGRLMQ 692
Query: 118 QVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177
+ G + ++L L + + IA N ++I+G + + F +
Sbjct: 693 ALPAGGAMVAVAAAEDEVLPSLTDG----VGIAAINAPKSVVISGAEAAVTAISDQFAQQ 748
Query: 178 NAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISN-----------FEALP 226
L VS FHS M+P+ ++F P I ++SN F +
Sbjct: 749 GRRVHRLAVSHAFHSPLMEPMLEEFARIAAQVEAREPQIALVSNVTGELASADGGFGSAQ 808
Query: 227 YSIEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIK 277
Y +E H+ V++ DS L + F+E+GPG+ LT I+
Sbjct: 809 YWVE--------HVRRAVRFADSARQL--HTLGVTHFVEVGPGSGLTGSIE 849
>sp|P96204|PPSE_MYCTU Phthiocerol synthesis polyketide synthase type I PpsE
OS=Mycobacterium tuberculosis GN=ppsE PE=1 SV=2
Length = 1488
Score = 95.1 bits (235), Expect = 8e-19, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 17/279 (6%)
Query: 4 YLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNKTEY 56
+LFPGQG+Q+VGM + L+D P + + G + + L + +
Sbjct: 552 FLFPGQGAQHVGMAKGLYDTEPVFAQHFDTCAAGFRDETGIDLHAEVFDGTATDLERIDR 611
Query: 57 TQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLM 116
+QPAL+ V + + G A +G+S GEY A AGVF + ++ V R++LM
Sbjct: 612 SQPALFTVE-YALAKLVDTFGVRAGAYIGYSTGEYIAATLAGVFDLQTAIKTVSLRARLM 670
Query: 117 SQVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
+ GAM AV + + L ++++ N ++AGPK+ I + +
Sbjct: 671 HESPPGAMVAV-ALGPDDVTQYLPPE----VELSAVNDPGNCVVAGPKDQIRALRQRLTE 725
Query: 177 NNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNL 236
+ + FH+ M P+ +F FL P P++SN S +++ +
Sbjct: 726 AGIPVRRVRATHAFHTSAMDPMLGQFQEFLSRQQLRPPRTPLLSNLTGSWMSDQQVVDPA 785
Query: 237 S--NHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLT 273
S + +P+++ D + +L + +E+GPG LT
Sbjct: 786 SWTRQISSPIRFADELDVVLAAPSRIL--VEVGPGGSLT 822
>sp|Q7TXL6|PPSE_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I
PpsE OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=ppsE PE=1 SV=1
Length = 1488
Score = 95.1 bits (235), Expect = 8e-19, Method: Composition-based stats.
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 17/279 (6%)
Query: 4 YLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNKTEY 56
+LFPGQG+Q+VGM + L+D P + + G + + L + +
Sbjct: 552 FLFPGQGAQHVGMAKGLYDTEPVFAQHFDTCAAGFRDETGIDLHAEVFDGTATDLERIDR 611
Query: 57 TQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLM 116
+QPAL+ V + + G A +G+S GEY A AGVF + ++ V R++LM
Sbjct: 612 SQPALFTVE-YALAKLVDTFGVRAGAYIGYSTGEYIAATLAGVFDLQTAIKTVSLRARLM 670
Query: 117 SQVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
+ GAM AV + + L ++++ N ++AGPK+ I + +
Sbjct: 671 HESPPGAMVAV-ALGPDDVTQYLPPE----VELSAVNDPGNCVVAGPKDQIRALRQRLTE 725
Query: 177 NNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNL 236
+ + FH+ M P+ +F FL P P++SN S +++ +
Sbjct: 726 AGIPVRRVRATHAFHTSAMDPMLGQFQEFLSRQQLRPPRTPLLSNLTGSWMSDQQVVDPA 785
Query: 237 S--NHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLT 273
S + +P+++ D + +L + +E+GPG LT
Sbjct: 786 SWTRQISSPIRFADELDVVLAAPSRIL--VEVGPGGSLT 822
>sp|Q12397|STCA_EMENI Putative sterigmatocystin biosynthesis polyketide synthase
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS
112.46 / NRRL 194 / M139) GN=stcA PE=3 SV=2
Length = 2211
Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 28/291 (9%)
Query: 8 GQGSQYVGMGQLLFDKFPDI---IEKSNNIL-GYSIKE-LCLKNSKNQLNKTEYTQPALY 62
GQGSQY GMG L++ +P +E+ + + Y L + SK + E P +
Sbjct: 916 GQGSQYTGMGWQLYNSYPTFRSDLERFDQLARSYGFPSFLEVYTSKPVGDSMEDLLPVIV 975
Query: 63 IVNALSYRDHIKNT----GEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQ 118
+ +S + N G ++GHSLGEY AL +GV S D L LV R+KL+ +
Sbjct: 976 QLALVSLEMALGNLLGSFGLKPSAVIGHSLGEYAALYISGVLSAADTLYLVGMRAKLLQE 1035
Query: 119 VLDGAMAAVIGINYKKIL--NILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176
A++ + + +L E+N ++A +N N +++GP ++ N Q
Sbjct: 1036 RCQRGTHAMLAVRASPVTLCEVLAESN---CEVACHNGPNDTVLSGPLKEVMNLQNSLSA 1092
Query: 177 NNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNN- 235
L + FHS ++PI ++F N FH P IPV+S P ++ I
Sbjct: 1093 TGIKGTLLKLPFAFHSAQVQPILEEFKNVARGVTFHKPQIPVLS-----PLLVKVIDEKG 1147
Query: 236 ------LSNHLINPVKWFDSIYYLLNKS--KNEMEFMEIGPGTVLTKFIKS 278
L+ H PVK + + ++ + +++GP ++ IK+
Sbjct: 1148 TVDPVYLARHCREPVKMVSVLEHARDQHIITDRTIVIDVGPKALMAGMIKT 1198
>sp|O13698|FABD_SCHPO Malonyl CoA-acyl carrier protein transacylase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mct1 PE=3 SV=1
Length = 318
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 140/316 (44%), Gaps = 47/316 (14%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDK--FPDIIEKSNNILGYSIKELCLK-NSKNQLNK--TE 55
M LFPGQG + Q + + ++++ N+ I++ ++ +K+ L + T
Sbjct: 1 MSAILFPGQGVDWKTWMQPYLENNIVQNTLKEAENVTEIEIRKYIVEAEAKSNLRQPITT 60
Query: 56 YTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKL 115
QPA+ + R T ++ F VGHSLGEY+A ++ SF L+LVQ R+K
Sbjct: 61 IAQPAILACSIALLRAFPPFTKKF-RFYVGHSLGEYSAFVASQTLSFSSALKLVQARAKA 119
Query: 116 MSQVLDGAMAAVIGINYKKILNIL------KENNLNT----------IDIANYNTLNQII 159
MS A+ + N +L I +N LNT IDIAN N+ QI+
Sbjct: 120 MS------YASALCQNPTSMLAITLTSRFPTDNFLNTVYSAVQKYRLIDIANVNSDRQIV 173
Query: 160 IAGPKNDINN-----AQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFH-S 213
++G K ++ + +++ L+VSG FHSRYM P N L + F+ S
Sbjct: 174 LSGDKKELESITSTLSELVRSLGKLRSNWLDVSGAFHSRYMLPARDSLKNALGETEFNIS 233
Query: 214 PN----------IPVISNFEA--LPYSIEKITNNLSNHLINPVKWFDSIYYLLNKSKNEM 261
P +P+ISN A P E I L PV + + + + +K +
Sbjct: 234 PELCYTDSGKRFLPIISNVTAELYPADEEDIRRQLLLQCFRPVLFKNCLKTVKSKYGANL 293
Query: 262 EFMEIGPGTVLTKFIK 277
F GPGT + K
Sbjct: 294 -FYAYGPGTTMQSIAK 308
>sp|O34877|PKSD_BACSU Polyketide biosynthesis acyltransferase homolog PksD OS=Bacillus
subtilis (strain 168) GN=pksD PE=1 SV=2
Length = 324
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 143/290 (49%), Gaps = 22/290 (7%)
Query: 3 TYLFPGQGSQYVGMGQLLFDK---FPDIIEKSNNI----LGYSIKELCL---KNSKNQLN 52
++F GQGSQY MG+ LF + F + + + I +G SI E K + +
Sbjct: 6 VFMFSGQGSQYYHMGKELFKENTVFRQSMLEMDAIAARRIGTSIVEEIYHPGKRVSDPFD 65
Query: 53 KTEYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKR 112
++ PA++++ Y+ +++ G Y D+++G SLGE+ A +GV ED L + ++
Sbjct: 66 SILFSHPAIFMIEYSLYKV-LEDRGIYPDYVLGSSLGEFAAAAVSGVSDAEDMLDCILEQ 124
Query: 113 SKLMSQVLD-GAMAAVIGINYKKILNILKE--NNLNTIDIANYNTLNQIIIAGPKNDINN 169
+ ++ D G M A++ + ++LN + N I I NY++ +I+G ++ I
Sbjct: 125 AIIIQNSCDKGKMLAIL--DKPQLLNDHPQLFGNSELISI-NYDS--HFVISGEEDHIRK 179
Query: 170 AQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI 229
++ + L VS FHS + P + FL F P+IP++S+ +
Sbjct: 180 IMEDLKEKQILCQLLPVSYAFHSSLIDPAESAYAEFLRSKSFQKPSIPIVSSLTGSCLHV 239
Query: 230 EKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSI 279
N N + P+ + ++I YL +S++ +F+++GP L F+K +
Sbjct: 240 MD-ENFFWNAVRKPMMFREAIRYL--ESQHTCKFIDLGPSGTLAAFVKQL 286
>sp|A7Z4X9|BAED_BACA2 Polyketide biosynthesis acyltransferase homolog BaeD OS=Bacillus
amyloliquefaciens (strain FZB42) GN=baeD PE=1 SV=1
Length = 324
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 145/291 (49%), Gaps = 24/291 (8%)
Query: 3 TYLFPGQGSQYVGMGQLLF-------DKFPDIIEKSNNILGYSI-KELCLKNSK--NQLN 52
++F GQGSQY MG+ LF K D+ + + + GYS+ KE+ ++ + +
Sbjct: 6 VFMFSGQGSQYYQMGKELFAHNAAFRQKMLDLDDFAVSRFGYSVLKEMYHTGNRLSDPFD 65
Query: 53 KTEYTQPALYIVN-ALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQK 111
+ ++ PA+++ AL+Y ++ G D+++G SLGEY A +GV S ED L V +
Sbjct: 66 RLLFSHPAIFMAEYALAYA--LEQRGIRPDYVIGASLGEYAAAAVSGVLSAEDALDCVLE 123
Query: 112 RSKLMSQVL-DGAMAAVIG-INYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINN 169
+++++++ +G+M A++G + +L E++ ++A+ N + +I+G + I
Sbjct: 124 QARIVTETCRNGSMLAILGDPALYQDDPLLGEHS----ELASVNYHSHFVISGEREHIKK 179
Query: 170 AQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI 229
+ + L VS FHS + + + FL +P IP IS+ A +
Sbjct: 180 IMDDLREKQIPHQLLPVSYGFHSALVDQAEQPYKRFLAQKSIRTPFIPYISS--ATGEAE 237
Query: 230 EKITNNLSNHLIN-PVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSI 279
I + ++ P+++ +++ + ++ K +++ GP L F K I
Sbjct: 238 TDIQADFFWDIVRKPIRFREALQFADSRQKG--LYIDAGPSGTLAAFAKQI 286
>sp|B0G170|PKS28_DICDI Probable polyketide synthase 28 OS=Dictyostelium discoideum
GN=pks28 PE=3 SV=1
Length = 2690
Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 135/309 (43%), Gaps = 42/309 (13%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNK 53
+ +F GQGSQY M L++ P E N GYS+ L ++ +K
Sbjct: 566 LTVIVFCGQGSQYNRMALSLYENEPIFRESVNRFDKELFKYYGYSV----LDRLRSVSDK 621
Query: 54 TEYT-------QPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGL 106
E + QPA ++ +S + K+ G AD +VGHSLGE ++ S+G+ FE
Sbjct: 622 DEISIHLPILAQPANIMI-QISLYELYKHWGVSADIIVGHSLGELSSSYSSGMIDFETLC 680
Query: 107 RLVQKRSKLMSQVLDGAMAAVIGINYKKILNIL--KENNLNTIDIANYNTLNQIIIAGPK 164
L+ RS ++ A + I+Y + + K N T++IA YN+ I+IAG +
Sbjct: 681 HLIYHRSLAQNKTTGTGRALSVNISYDEFIERYQSKNNKYETLEIACYNSPTSIVIAGKE 740
Query: 165 NDINNAQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHS--PNIPVISNF 222
+ +N F+ N+ L FH+ I + + VF S P++PV S
Sbjct: 741 DLLNEISKEFKSNDIFCAMLGSLSSFHTSSQLMIKDE----VCSLVFKSKLPSVPVFSTV 796
Query: 223 ------EALPYSIEKITNNLSNHLINPVKWFDSIYYLL-----NKSKNEMEFMEIGPGTV 271
+ PY+ + N+ PV + +I L N NE+ F+E+ P
Sbjct: 797 TTNLFNDQTPYNANYVWENIR----QPVSFTQTISNLYKHIESNDMGNEITFIEVAPHPT 852
Query: 272 LTKFIKSIK 280
L ++ +K
Sbjct: 853 LQFYLNQMK 861
>sp|P96203|PPSD_MYCTU Phthiocerol synthesis polyketide synthase type I PpsD
OS=Mycobacterium tuberculosis GN=ppsD PE=3 SV=1
Length = 1827
Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 16/279 (5%)
Query: 2 KTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNKT 54
+ +++ GQGSQ+ MGQ L P + + +G+S+++ + +++
Sbjct: 565 RVFVYSGQGSQWASMGQQLLANEPAFAKAVAELDPIFVDQVGFSLQQTLIDG--DEVVGI 622
Query: 55 EYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSK 114
+ QP L + L+ + ++ G D ++GHS+GE +A AG + E GLR++ RS+
Sbjct: 623 DRIQPVL-VGMQLALTELWRSYGVIPDAVIGHSMGEVSAAVVAGALTPEQGLRVITTRSR 681
Query: 115 LMSQVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFF 174
LM+++ A++ ++ ++ + +A + + Q +IAGP ++
Sbjct: 682 LMARLSGQGAMALLELDADAAEALIA--GYPQVTLAVHASPRQTVIAGPPEQVDTVIAAV 739
Query: 175 EKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITN 234
N + + V H + PI + + L D P+IP+IS + +
Sbjct: 740 ATQNRLARRVEVDVASHHPIIDPILPELRSALADLTPQPPSIPIISTTYESAQPVAD-AD 798
Query: 235 NLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLT 273
S +L NPV++ ++ + F+EI P VLT
Sbjct: 799 YWSANLRNPVRFHQAV---TAAGVDHNTFIEISPHPVLT 834
>sp|Q7TXL7|PPSD_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I
PpsD OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=ppsD PE=3 SV=1
Length = 1827
Score = 81.6 bits (200), Expect = 9e-15, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 127/279 (45%), Gaps = 16/279 (5%)
Query: 2 KTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNKT 54
+ +++ GQGSQ+ MGQ L P + + +G+S+++ + +++
Sbjct: 565 RVFVYSGQGSQWASMGQQLLANEPAFAKAVAELDPIFVDQVGFSLQQTLIDG--DEVVGI 622
Query: 55 EYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSK 114
+ QP L + L+ + ++ G D ++GHS+GE +A AG + E GLR++ RS+
Sbjct: 623 DRIQPVL-VGMQLALTELWRSYGVIPDAVIGHSMGEVSAAVVAGALTPEQGLRVITTRSR 681
Query: 115 LMSQVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFF 174
LM+++ A++ ++ ++ + +A + + Q +IAGP ++
Sbjct: 682 LMARLSGQGAMALLELDADAAEALIA--GYPQVTLAVHASPRQTVIAGPPEQVDTVIAAV 739
Query: 175 EKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITN 234
N + + V H + PI + + L D P+IP+IS + +
Sbjct: 740 ATQNRLARRVEVDVASHHPIIDPILPELRSALADLTPQPPSIPIISTTYESAQPVAD-AD 798
Query: 235 NLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLT 273
S +L NPV++ ++ + F+EI P VLT
Sbjct: 799 YWSANLRNPVRFHQAV---TAAGVDHNTFIEISPHPVLT 834
>sp|Q54B49|PKS45_DICDI Probable polyketide synthase 45 OS=Dictyostelium discoideum
GN=pks45 PE=3 SV=2
Length = 3092
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 17/271 (6%)
Query: 4 YLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSI--KELCLKNSKN-QLNK 53
++F GQG Q+ M L+D+ P +K++ I GYSI K +K+ +N+
Sbjct: 558 FVFSGQGPQWSKMFTQLYDQEPIFKQKTDQIDSLLSKHYGYSILNKLNSIKDDDTVTINE 617
Query: 54 TEYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRS 113
QP+++++ ++ + K+ G A +GHSLGE ++ +G+ E G ++ RS
Sbjct: 618 PILAQPSVFMIQ-MALIELYKHWGILASISIGHSLGEVSSAVCSGMIDLETGCFIIYHRS 676
Query: 114 KLMSQVLDGAMAAVIGINYKKILNILK--ENNLNTIDIANYNTLNQIIIAGPKNDINNAQ 171
+L Q V +N +K + +I+IA +N+ + I++AG ++++
Sbjct: 677 RLQQQTSGSGKMLVASLNEQKFNQEFDNFQQKYPSIEIACFNSPSSIVLAGKESELQEIS 736
Query: 172 IFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIP----VISNFEALPY 227
++ I L FHS +PI + L D NIP V SN
Sbjct: 737 NILKEQETFSIFLGAQSSFHSSSQEPIKDELLKQLKDIKSTKSNIPNFSTVTSNLFNDDD 796
Query: 228 SIEKITNNLSNHLINPVKWFDSIYYLLNKSK 258
+ + + S H N + FDS Y N K
Sbjct: 797 EVAQQPDEASAHNTNTITLFDSKYVYENVRK 827
>sp|Q03149|WA_EMENI Conidial yellow pigment biosynthesis polyketide synthase
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS
112.46 / NRRL 194 / M139) GN=wA PE=1 SV=2
Length = 2157
Score = 79.0 bits (193), Expect = 5e-14, Method: Composition-based stats.
Identities = 68/287 (23%), Positives = 129/287 (44%), Gaps = 13/287 (4%)
Query: 4 YLFPGQGSQYVGMGQLLFDK---FPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPA 60
+LF GQG+QY MG+ L++ F IE + I L L +E +
Sbjct: 912 FLFTGQGAQYAAMGKQLYEDCSHFRSAIEHLDCISQGQDLPSILPLVDGSLPLSELSPVV 971
Query: 61 LYIVNA---LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMS 117
+ + ++ + G F++GHSLG++ A+ +AGV S D + +R++L++
Sbjct: 972 VQLGTTCVQMALSSFWASLGITPSFVLGHSLGDFAAMNAAGVLSTSDTIYACGRRAQLLT 1031
Query: 118 QVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177
+ A++ I ++ + + N D+A N+ ++ +I+GPK+ I+ +
Sbjct: 1032 ERCQPGTHAMLAIK-APLVEVKQLLNEKVHDMACINSPSETVISGPKSSIDELSRACSEK 1090
Query: 178 NAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNF--EALPYSIEKITNN 235
L V FHS ++PI + L F+ P++P +S E + + I N
Sbjct: 1091 GLKSTILTVPYAFHSAQVEPILEDLEKALQGITFNKPSVPFVSALLGEVITEAGSNILNA 1150
Query: 236 --LSNHLINPVKWFDSIYYLLNKS--KNEMEFMEIGPGTVLTKFIKS 278
L H V + + + N ++ ++E+GP TV + +K+
Sbjct: 1151 EYLVRHCRETVNFLSAFEAVRNAKLGGDQTLWLEVGPHTVCSGMVKA 1197
>sp|B0G103|PKS10_DICDI Probable polyketide synthase 10 OS=Dictyostelium discoideum
GN=pks10 PE=3 SV=1
Length = 2485
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 145/296 (48%), Gaps = 26/296 (8%)
Query: 4 YLFPGQGSQYVGMGQLLFDK---FPDIIEKSNNIL----GYSIKELCLKNSKNQLNKTEY 56
++F GQGSQY M L++ F + I++ +N L GYS+ E ++ N +++
Sbjct: 557 FVFSGQGSQYNTMFDQLYNDEIIFKESIDRIDNSLFKYYGYSVFEKFKSSNLNSIHEPLI 616
Query: 57 TQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLM 116
Q A+ ++N +S + K+ G A F+VGHSLGE +A +G+ E ++ RS +
Sbjct: 617 AQAAISMLN-ISLFELYKHWGIEASFIVGHSLGEISAAHCSGMIDLETLCYIIYHRS--I 673
Query: 117 SQVLDGAMAAVIGINYKKILNILK-ENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFE 175
+Q+ ++ IN I K + ++IA YN+ N I++AG ++ +N Q+F E
Sbjct: 674 AQIKTHGNGRMLSINQSSDEYISKYSSKYADLEIACYNSQNSIVVAGNEHKLN--QLFNE 731
Query: 176 --KNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKIT 233
+NN + FH+ K + F L F + P IP+ S + +
Sbjct: 732 LKENNEFATMIASQSSFHTS--NQCITKDDIFKLQFTANLPLIPIFSTVTTNLFDNSTLF 789
Query: 234 NN--LSNHLINPVKWFDSIYYLL-------NKSKNEMEFMEIGPGTVLTKFIKSIK 280
N+ + +++I PV++ +I +KS E+ +E+ P L+ ++K +K
Sbjct: 790 NSSYIYDNIICPVRFEQTISNFYKHIDDDNDKSDVEVVIIELAPHPTLSYYLKQMK 845
>sp|Q558Y6|PKS14_DICDI Probable polyketide synthase 14 OS=Dictyostelium discoideum
GN=pks14 PE=3 SV=2
Length = 2998
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 40/307 (13%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNILG--------YSIK---ELCLKNSKN 49
+ ++F GQGSQY M L++ P I +KS ++L YS+ + +
Sbjct: 572 ITVFVFAGQGSQYNTMSLELYNNEP-IFKKSMDLLDDELLKYYEYSVLNKFRSIIDDGDR 630
Query: 50 QLNKTEYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109
+ QP + ++ +S + K+ G A F+VGHSLGE A +G+ + + L+
Sbjct: 631 SIQHPTIAQPIVCML-TISLFELYKHWGIEASFIVGHSLGEIPAAYCSGMITLDTLCYLI 689
Query: 110 QKRSKLMSQV---LDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKND 166
RS ++Q+ +G IGI+ + L+ I+IA YN+ N I++ G +
Sbjct: 690 YHRS--LAQIETHCNGGRMLSIGISSEDYLSSNYSTKYPDIEIACYNSPNSIVLGGNEQQ 747
Query: 167 INNAQIFFE-KNNAIYIPLNVS-GPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNF-- 222
+N QI E K+ I+ + S FH+ K + N L+ SP IP+ S
Sbjct: 748 LN--QISNELKDKGIFSTMLASLSSFHTSNQKITKDQILN--LNINHQSPTIPIFSTVTT 803
Query: 223 -----EALPYSIEKITNNLSNHLINPVKWFDSIYYL-----LNKSKNEMEFMEIGPGTVL 272
P++ E + NN +I PVK+ +I L +NK NE+ F+E+ P L
Sbjct: 804 NLYESSTTPFNSEYVYNN----IIKPVKFSQTISNLYKHIEINKLGNEIVFIELAPHPTL 859
Query: 273 TKFIKSI 279
++K +
Sbjct: 860 QFYLKQM 866
>sp|Q54ED6|PKS41_DICDI Probable polyketide synthase 41 OS=Dictyostelium discoideum
GN=pks41 PE=3 SV=1
Length = 2542
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 37/312 (11%)
Query: 4 YLFPGQGSQYVGMGQLLFDKFP-------DIIEKSNNILGYSIKELCLKNSKNQLNKTEY 56
++F GQG+QY M + L+D P I K N G+SI E ++N L +Y
Sbjct: 546 FVFCGQGAQYSTMAKNLYDNEPIFKKSMDKIDSKLNEYYGFSILEKLRSFNENDLKGIQY 605
Query: 57 T---QPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRS 113
+ QP+ +V +S + + G +VGHSLGE ++ +G+ + L+ RS
Sbjct: 606 SIIAQPSTCMV-QISLFELYCHWGIKPSIIVGHSLGEISSSYCSGMIDLDTFCYLIYHRS 664
Query: 114 KLMSQV--LDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQ 171
+ S+ L ++ IG N N + ++IA YN+ + I+IAG + +N
Sbjct: 665 MVQSKTNGLGRMLSISIGENE---YNSKYSSRYPELEIACYNSPSSIVIAGKELILNEII 721
Query: 172 IFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNF------EAL 225
+K+ L FH+ + + + F P IP+ S E
Sbjct: 722 KELKKDGVFCAILGSPTSFHTSSQLSVKDEI--LKISFKSKQPTIPIFSTVTTNLYDEMN 779
Query: 226 PYSIEKITNNLSNHLINPVKWFDSIY---------YLLNKSKNEMEFMEIGPGTVLTKFI 276
P+ + + +N+ INPV++ ++I Y +N + NE+ F+EI P L+ ++
Sbjct: 780 PFDTKYVYDNI----INPVRFTNTISNIYKHIELNYSVNNNSNEVIFIEIAPHPTLSFYL 835
Query: 277 KSIKNEYKKDCV 288
K + E KK V
Sbjct: 836 KQMVPEDKKQSV 847
>sp|Q54G30|PKS27_DICDI Probable polyketide synthase 27 OS=Dictyostelium discoideum
GN=pks27 PE=3 SV=1
Length = 2684
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 137/315 (43%), Gaps = 45/315 (14%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNK 53
+ +F GQ SQY M L++ P E N GYS+ L ++ +K
Sbjct: 565 LTVMVFCGQSSQYNKMALSLYENEPIFKESVNRFDKELFKYYGYSV----LDRLRSVSDK 620
Query: 54 TEYT-------QPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGL 106
E + QPA ++ +S + K+ G AD +VGHSLGE ++ S+G+ FE
Sbjct: 621 DEISIHLPILAQPANIMI-QISLYELYKHWGVSADIIVGHSLGEMSSSYSSGMIDFETLC 679
Query: 107 RLVQKRSKLMSQVLDGAMAAVIGINYKKILNIL--KENNLNTIDIANYNTLNQIIIAGPK 164
L+ RS ++ + I+Y + + K N T++IA YN+ I+IAG +
Sbjct: 680 YLIYHRSLAQNRTTGTGRMLSVNISYDEFIEKYQSKNNKYETLEIACYNSPTSIVIAGKE 739
Query: 165 NDINNAQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHS--PNIPVISNF 222
+ +N F+ N+ L FH+ I + + VF S P++PV S
Sbjct: 740 DLLNEISKEFKSNDIFCAMLGSLSSFHTSSQFMIKDE----VCSLVFKSKLPSVPVFSTV 795
Query: 223 ------EALPYSIEKITNNLSNHLINPVKWFDSIYYLL-----NKSKNEMEFMEIGPGTV 271
+ PY+ + N + PV + +I L N NE+ F+E+ P
Sbjct: 796 TTNLFNDQTPYNANYVWEN----IYQPVSFTQTISNLYKHIESNDMGNEITFIEVAPHPT 851
Query: 272 LTKFI---KSIKNEY 283
L ++ KSI++ Y
Sbjct: 852 LQFYLNQMKSIQSSY 866
>sp|Q54FN2|PKS34_DICDI Probable polyketide synthase 34 OS=Dictyostelium discoideum
GN=pks34 PE=3 SV=1
Length = 3078
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 5 LFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSI-KELCLKNSKN--QLNKT 54
+ GQGSQY M L+D P E N GYS+ +L + K+ +++
Sbjct: 584 VLCGQGSQYNKMASSLYDNEPIFRESVNRFDKELFKYYGYSVLDKLRSIDDKDLISIHQP 643
Query: 55 EYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSK 114
QPA I+ Y + K+ G AD ++GHSLGE ++ +G+ F+ L RS
Sbjct: 644 ILAQPANVIIQVSLYELY-KHWGVSADIIIGHSLGEISSSYCSGIIDFQTLCYLTYHRSV 702
Query: 115 LMSQVLDGAMAAVIGINYKKILNILKENN-LNTIDIANYNTLNQIIIAGPKNDINNAQIF 173
++ + + I+ + +N + +++IA YN+ I+I+G ++ +N
Sbjct: 703 AQNRTIGTGRMLSVNISSDEFINKYQSTTKYESLEIACYNSPTSIVISGNEDLLNEITNE 762
Query: 174 FEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVIS-------NFEALP 226
F+ N+ L + FH+ + I + + L+ P+I V S N ++ P
Sbjct: 763 FKSNDIFCTMLGLLSSFHTSSQQMIKDEVCS--LNISSKQPSIAVFSTVTTNLFNHQSSP 820
Query: 227 YSIEKITNNLSNHLINPVKWFDSIYYLL-----NKSKNEMEFMEIGPGTVLTKFIKSIK 280
++ + + NN+ PV++ +I L N NE+ F+E+ P L ++ +K
Sbjct: 821 FNADYVFNNIR----QPVRFTQTITNLYKHIESNDMGNEITFIEVSPHPTLQYYLNQMK 875
>sp|Q54FQ1|PKS31_DICDI Probable polyketide synthase 31 OS=Dictyostelium discoideum
GN=pks31 PE=3 SV=1
Length = 2623
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 30/299 (10%)
Query: 5 LFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSI-KELCLKNSKN--QLNKT 54
+ GQGSQY M L+D P E N GYS+ +L + K+ +++
Sbjct: 585 VLCGQGSQYNKMALSLYDNEPIFRESVNRFDKELFKYYGYSVLDKLRSIDDKDLISIHQP 644
Query: 55 EYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSK 114
QPA I+ Y + K+ G AD ++GHSLGE ++ +G+ F+ L+ RS
Sbjct: 645 ILAQPANVIIQVSLYELY-KHWGVSADIIIGHSLGEVSSPYCSGMIDFQTLCYLIYHRSV 703
Query: 115 LMSQVLDGAMAAVIGINYKKILNILKENN-LNTIDIANYNTLNQIIIAGPKNDINNAQIF 173
++ + I+ + +N + +++IA YN+ I+IAG ++ +N
Sbjct: 704 AQNRTTGTGRMLSVNISSDEFINNYQSTTKYESLEIACYNSPTSIVIAGREDLLNEITNE 763
Query: 174 FEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVIS-------NFEALP 226
F+ NN L + FH+ + I + + L+ P+I V S N ++LP
Sbjct: 764 FKSNNIFCTMLGLLSSFHTSSQQMIKDEVCS--LNISSKQPSIAVFSTVTTNLFNHQSLP 821
Query: 227 YSIEKITNNLSNHLINPVKWFDSIYYLL-----NKSKNEMEFMEIGPGTVLTKFIKSIK 280
++ + N+ PV++ +I L N NE+ F+E+ P L ++ +K
Sbjct: 822 FNADYAFENIR----QPVRFTQTITNLYKHIESNDMGNEITFIEVSPHPTLQYYLNQMK 876
>sp|P63458|FABD_MYCTU Malonyl CoA-acyl carrier protein transacylase OS=Mycobacterium
tuberculosis GN=fabD PE=1 SV=1
Length = 302
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 1 MKTYLFPGQGSQYVGM--GQLLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQ 58
M L PGQGSQ GM L D I + + L S ++ T Q
Sbjct: 1 MIALLAPGQGSQTEGMLSPWLQLPGAADQIAAWSKAADLDLARLGTTASTEEITDTAVAQ 60
Query: 59 PALYIVNALSYRDHIKN---TGEYADFLV-GHSLGEYNALESAGVFSFEDGLRLVQKRSK 114
P + L++++ + G+ D +V GHS+GE A AGV + +D + L R
Sbjct: 61 PLIVAATLLAHQELARRCVLAGK--DVIVAGHSVGEIAAYAIAGVIAADDAVALAATRGA 118
Query: 115 LMSQVL---DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQ 171
M++ M+AV+G + ++L+ L++ +L AN N QI+ AG + +
Sbjct: 119 EMAKACATEPTGMSAVLGGDETEVLSRLEQLDLVP---ANRNAAGQIVAAG---RLTALE 172
Query: 172 IFFE--KNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPY-S 228
E A L V+G FH+ +M P F + P ++SN + P S
Sbjct: 173 KLAEDPPAKARVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTS 232
Query: 229 IEKITNNLSNHLINPVKW 246
+ L + L PV+W
Sbjct: 233 AAAAMDTLVSQLTQPVRW 250
>sp|P63459|FABD_MYCBO Malonyl CoA-acyl carrier protein transacylase OS=Mycobacterium
bovis (strain ATCC BAA-935 / AF2122/97) GN=fabD PE=3
SV=1
Length = 302
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 20/258 (7%)
Query: 1 MKTYLFPGQGSQYVGM--GQLLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQ 58
M L PGQGSQ GM L D I + + L S ++ T Q
Sbjct: 1 MIALLAPGQGSQTEGMLSPWLQLPGAADQIAAWSKAADLDLARLGTTASTEEITDTAVAQ 60
Query: 59 PALYIVNALSYRDHIKN---TGEYADFLV-GHSLGEYNALESAGVFSFEDGLRLVQKRSK 114
P + L++++ + G+ D +V GHS+GE A AGV + +D + L R
Sbjct: 61 PLIVAATLLAHQELARRCVLAGK--DVIVAGHSVGEIAAYAIAGVIAADDAVALAATRGA 118
Query: 115 LMSQVL---DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQ 171
M++ M+AV+G + ++L+ L++ +L AN N QI+ AG + +
Sbjct: 119 EMAKACATEPTGMSAVLGGDETEVLSRLEQLDLVP---ANRNAAGQIVAAG---RLTALE 172
Query: 172 IFFE--KNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPY-S 228
E A L V+G FH+ +M P F + P ++SN + P S
Sbjct: 173 KLAEDPPAKARVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTS 232
Query: 229 IEKITNNLSNHLINPVKW 246
+ L + L PV+W
Sbjct: 233 AAAAMDTLVSQLTQPVRW 250
>sp|Q54FN7|PKS33_DICDI Probable polyketide synthase 33 OS=Dictyostelium discoideum
GN=pks33 PE=3 SV=2
Length = 3127
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 134/303 (44%), Gaps = 30/303 (9%)
Query: 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSI-KELCLKNSKN--Q 50
+ + GQGSQY M L+D P E N GYS+ +L + K+
Sbjct: 575 LTVMVLCGQGSQYNKMALSLYDNVPIFRESVNRFDKELFKYYGYSVLDKLRSIDDKDLIS 634
Query: 51 LNKTEYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110
+++ QPA I+ Y + K+ G AD ++GHSLGE ++ +G+ F+ L
Sbjct: 635 IHQPILAQPANVIIQVSLYELY-KHWGVSADIIIGHSLGEISSAYCSGMIDFQTLCYLTY 693
Query: 111 KRSKLMSQVLDGAMAAVIGINYKKILNILKENN-LNTIDIANYNTLNQIIIAGPKNDINN 169
RS ++ + + I+ + +N + +++IA YN+ I+IAG ++ +N
Sbjct: 694 HRSVAQNRTIGTGRMLSVNISSDEFINKYQSTTKYKSLEIACYNSPTSIVIAGKEDLLNE 753
Query: 170 AQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVIS-------NF 222
F+ N+ L + FH+ + I + + L+ P+I V S N
Sbjct: 754 ITNEFKSNDIFCSMLGLLSSFHTSSQQMIKDEVCS--LNISSKQPSIAVFSTVTTNLFNH 811
Query: 223 EALPYSIEKITNNLSNHLINPVKWFDSIYYLL-----NKSKNEMEFMEIGPGTVLTKFIK 277
+ P++ + NN+ PV++ +I L N NE+ F+E+ P L ++
Sbjct: 812 QTSPFNADYAFNNIR----QPVRFTQTITNLYKHIESNDMGNEITFIEVSPHPTLQYYLN 867
Query: 278 SIK 280
+K
Sbjct: 868 QMK 870
>sp|A0R0B2|FABD_MYCS2 Malonyl CoA-acyl carrier protein transacylase OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=fabD PE=1
SV=1
Length = 290
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 49 NQLNKTEYTQPALYIVNALSYRDHIKNTGEYADFLV-GHSLGEYNALESAGVFSFEDGLR 107
++ T TQP + L++ + K A+ +V GHS+GE A AGV S +D ++
Sbjct: 36 EEITDTAVTQPLVVAATLLAHEELTKRGHSAAETIVAGHSVGEIAAYAIAGVISADDAVK 95
Query: 108 LVQKRSKLMSQ---VLDGAMAAVIGINYKKILNILKENNLNTIDI--ANYNTLNQIIIAG 162
L R M++ V MAAV+G + ++L L +D+ AN N QI+ AG
Sbjct: 96 LAATRGAEMAKACAVEPTGMAAVLGGDEAEVL-----ARLEALDLVPANRNAAGQIVAAG 150
Query: 163 PKNDINNAQIFFE--KNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVIS 220
++ E A L +G FH+ YM + P ++S
Sbjct: 151 AVAALDK---LAEDPPAKARVRKLATAGAFHTHYMASALDGYAAAAQSVTTSEPTATLLS 207
Query: 221 NFEALP-YSIEKITNNLSNHLINPVKWFDSIYYLLNKSKN 259
N + P S L L PV+W L ++ +N
Sbjct: 208 NADGQPVASAADAMEKLVAQLTKPVRWDLCTATLRDRFQN 247
>sp|Q03131|ERYA1_SACER Erythronolide synthase, modules 1 and 2 OS=Saccharopolyspora
erythraea GN=eryA PE=1 SV=1
Length = 3491
Score = 72.4 bits (176), Expect = 5e-12, Method: Composition-based stats.
Identities = 71/301 (23%), Positives = 137/301 (45%), Gaps = 24/301 (7%)
Query: 4 YLFPGQGSQYVGMGQLLFDK--FPDIIEKSNNIL----GYSIKE-LCLKNSKNQLNKTEY 56
++FPGQG+Q+ GM + L F + I + + +L G+S+ E L + L + +
Sbjct: 2509 FVFPGQGAQWEGMARELLPVPVFAESIAECDAVLSEVAGFSVSEVLEPRPDAPSLERVDV 2568
Query: 57 TQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLM 116
QP L+ V +S + G ++GHS GE A AG S EDG+R+V +RS+ +
Sbjct: 2569 VQPVLFAV-MVSLARLWRACGAVPSAVIGHSQGEIAAAVVAGALSLEDGMRVVARRSRAV 2627
Query: 117 SQVLD-GAMAAVIGINYKKILNILKENN-LNTIDIANYNTLNQIIIAGPKNDINNAQIFF 174
V G+M +V G + +L +++ +++A N + +++AG D A+ F
Sbjct: 2628 RAVAGRGSMLSVRG-GRSDVEKLLADDSWTGRLEVAAVNGPDAVVVAG---DAQAAREFL 2683
Query: 175 EKNNAI-----YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEA-LPYS 228
E + IP++ + H+ +++P+ + L +P S
Sbjct: 2684 EYCEGVGIRARAIPVDYAS--HTAHVEPVRDELVQALAGITPRRAEVPFFSTLTGDFLDG 2741
Query: 229 IEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYKKDCV 288
E +L +PV++ ++ L ++ F+E+ P VL ++ ++ + D
Sbjct: 2742 TELDAGYWYRNLRHPVEFHSAVQALTDQGY--ATFIEVSPHPVLASSVQETLDDAESDAA 2799
Query: 289 I 289
+
Sbjct: 2800 V 2800
Score = 45.8 bits (107), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 19/179 (10%)
Query: 4 YLFPGQGSQYVGMGQLLFDKFP----------DIIEKSNN--ILGYSIKELCLKNSKNQL 51
++FPGQG Q+ GM L D P D +E + ++ + E + L
Sbjct: 1032 FVFPGQGWQWAGMAVDLLDTSPVFAAALRECADALEPHLDFEVIPFLRAEAARREQDAAL 1091
Query: 52 N--KTEYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109
+ + + QP ++ V +S + G ++GHS GE A AG S +D R+V
Sbjct: 1092 STERVDVVQPVMFAV-MVSLASMWRAHGVEPAAVIGHSQGEIAAACVAGALSLDDAARVV 1150
Query: 110 QKRSKLMSQVLDGAMAAVIGINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDIN 168
RS++++ + A I ++ + + ++IA N +++AG ++++
Sbjct: 1151 ALRSRVIATMPGNKGMASIAAPAGEVRARIGDR----VEIAAVNGPRSVVVAGDSDELD 1205
Score = 38.5 bits (88), Expect = 0.073, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 4 YLFPGQGSQYVGM-GQLLFDK------FPDIIEKSNNILGYSIKELCLKNSKNQLNKTEY 56
++FPGQG+Q+ GM G+LL + + +++ ++ +S Q + E
Sbjct: 58 FVFPGQGAQWAGMAGELLGESRVFAAAMDACARAFEPVTDWTLAQVL--DSPEQSRRVEV 115
Query: 57 TQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNA 93
QPAL+ V S ++ G D +VGHS+GE A
Sbjct: 116 VQPALFAVQT-SLAALWRSFGVTPDAVVGHSIGELAA 151
>sp|Q54FD2|PKS38_DICDI Probable polyketide synthase 38 OS=Dictyostelium discoideum
GN=pks38 PE=3 SV=1
Length = 3133
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 132/299 (44%), Gaps = 30/299 (10%)
Query: 5 LFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSI-KELCLKNSKN--QLNKT 54
+ GQGSQY M L+D P E N GYS+ +L + K+ ++++
Sbjct: 566 VLCGQGSQYNKMALSLYDNEPIFRESVNRFDKELFKYYGYSVLDKLRSIDDKDLISIHQS 625
Query: 55 EYTQPALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSK 114
QPA I+ Y + K+ G AD ++GHSLGE ++ +G+ F+ L RS
Sbjct: 626 ILAQPATVIIQVSLYELY-KHRGVSADIIIGHSLGEISSAYCSGMIDFQTLCYLTYHRSV 684
Query: 115 LMSQVLDGAMAAVIGINYKKILNILKENN-LNTIDIANYNTLNQIIIAGPKNDINNAQIF 173
++ + I+ + +N + +++IA YN+ I+IAG ++ +N
Sbjct: 685 AQNRTSGTGKMLSVNISSDEFINSYQSTTKYESLEIACYNSPTSIVIAGKEDLLNEITKD 744
Query: 174 FEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVIS-------NFEALP 226
F+ N+ L FH+ + I + + L+ +I + S N E P
Sbjct: 745 FKTNDIFCAMLGSLSSFHTSSQQMIKDEVCS--LNISSKQSSIAIFSTVTTNLFNDETSP 802
Query: 227 YSIEKITNNLSNHLINPVKWFDSI-----YYLLNKSKNEMEFMEIGPGTVLTKFIKSIK 280
+ + + +N+ PV++ +I Y+ N NE+ F+E+ P L ++ +K
Sbjct: 803 FDADYVFDNIR----QPVRFTQTITNLYKYFESNDMGNEITFIEVSPHPTLQFYLNQMK 857
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,931,996
Number of Sequences: 539616
Number of extensions: 5806780
Number of successful extensions: 17479
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 96
Number of HSP's that attempted gapping in prelim test: 17017
Number of HSP's gapped (non-prelim): 295
length of query: 358
length of database: 191,569,459
effective HSP length: 119
effective length of query: 239
effective length of database: 127,355,155
effective search space: 30437882045
effective search space used: 30437882045
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)