Query psy2373
Match_columns 358
No_of_seqs 189 out of 1717
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 23:18:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2373.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2373hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00698 Acyl_transf_1: Acyl t 100.0 7.4E-59 1.6E-63 437.8 27.3 271 3-281 1-281 (318)
2 TIGR00128 fabD malonyl CoA-acy 100.0 3.6E-55 7.9E-60 407.7 33.3 278 1-281 2-288 (290)
3 COG0331 FabD (acyl-carrier-pro 100.0 2E-55 4.3E-60 405.6 26.8 283 1-286 3-296 (310)
4 PLN02752 [acyl-carrier protein 100.0 3.9E-54 8.5E-59 409.3 31.9 278 2-283 40-336 (343)
5 TIGR03131 malonate_mdcH malona 100.0 5.2E-54 1.1E-58 400.9 31.4 273 2-284 1-280 (295)
6 smart00827 PKS_AT Acyl transfe 100.0 6.5E-53 1.4E-57 394.1 31.5 273 6-283 1-286 (298)
7 TIGR02816 pfaB_fam PfaB family 100.0 3.8E-53 8.1E-58 415.4 30.0 295 2-310 183-537 (538)
8 TIGR02813 omega_3_PfaA polyket 100.0 1.3E-51 2.7E-56 460.3 32.9 305 1-310 580-925 (2582)
9 KOG2926|consensus 100.0 2.8E-44 6.1E-49 322.1 21.0 281 1-282 63-362 (386)
10 COG3321 Polyketide synthase mo 100.0 1E-43 2.2E-48 376.0 24.1 316 2-323 527-867 (1061)
11 KOG1202|consensus 100.0 5.4E-36 1.2E-40 300.2 17.7 300 2-312 501-828 (2376)
12 cd07198 Patatin Patatin-like p 93.1 0.57 1.2E-05 39.8 8.2 46 63-109 11-56 (172)
13 cd07205 Pat_PNPLA6_PNPLA7_NTE1 91.1 0.7 1.5E-05 39.3 6.5 46 64-110 14-59 (175)
14 cd07207 Pat_ExoU_VipD_like Exo 90.7 0.81 1.8E-05 39.5 6.6 44 67-110 15-58 (194)
15 COG1752 RssA Predicted esteras 90.6 0.74 1.6E-05 43.1 6.7 46 63-109 24-69 (306)
16 cd07210 Pat_hypo_W_succinogene 90.2 0.98 2.1E-05 40.2 6.8 47 63-110 13-59 (221)
17 cd07227 Pat_Fungal_NTE1 Fungal 89.4 1.1 2.4E-05 41.1 6.6 41 67-107 26-66 (269)
18 cd07209 Pat_hypo_Ecoli_Z1214_l 89.2 1.1 2.3E-05 39.8 6.2 38 63-101 11-48 (215)
19 cd07225 Pat_PNPLA6_PNPLA7 Pata 89.2 1.2 2.6E-05 41.8 6.8 43 67-109 31-73 (306)
20 cd07229 Pat_TGL3_like Triacylg 88.4 1.4 3.1E-05 42.6 6.9 44 66-110 98-141 (391)
21 cd07228 Pat_NTE_like_bacteria 87.9 1.5 3.3E-05 37.3 6.2 42 63-105 13-54 (175)
22 cd07224 Pat_like Patatin-like 86.3 3.4 7.4E-05 37.0 7.7 50 62-112 11-62 (233)
23 PRK10279 hypothetical protein; 86.1 1.2 2.5E-05 41.7 4.8 36 63-99 18-54 (300)
24 cd07218 Pat_iPLA2 Calcium-inde 84.6 4.2 9E-05 36.8 7.5 46 63-109 13-60 (245)
25 cd07204 Pat_PNPLA_like Patatin 82.7 5.7 0.00012 35.9 7.6 46 64-110 13-62 (243)
26 cd07231 Pat_SDP1-like Sugar-De 82.4 4.8 0.0001 37.8 7.0 42 67-109 84-125 (323)
27 cd07220 Pat_PNPLA2 Patatin-lik 81.8 6.6 0.00014 35.7 7.6 44 67-110 20-67 (249)
28 cd07232 Pat_PLPL Patain-like p 80.5 5.4 0.00012 39.0 7.0 43 67-110 83-125 (407)
29 cd07230 Pat_TGL4-5_like Triacy 80.3 5.9 0.00013 38.9 7.2 42 67-109 89-130 (421)
30 cd07221 Pat_PNPLA3 Patatin-lik 80.3 6.7 0.00015 35.6 7.1 45 67-111 16-64 (252)
31 PRK11126 2-succinyl-6-hydroxy- 79.9 2.1 4.6E-05 37.7 3.8 32 68-99 55-86 (242)
32 cd07208 Pat_hypo_Ecoli_yjju_li 76.7 4.1 8.9E-05 37.2 4.7 33 67-99 14-48 (266)
33 cd07219 Pat_PNPLA1 Patatin-lik 74.9 10 0.00022 36.5 6.9 49 61-110 23-75 (382)
34 cd07212 Pat_PNPLA9 Patatin-lik 74.3 11 0.00025 35.3 7.1 47 67-113 15-66 (312)
35 TIGR02240 PHA_depoly_arom poly 73.2 4.1 8.9E-05 37.0 3.8 29 70-98 82-110 (276)
36 TIGR03056 bchO_mg_che_rel puta 73.2 3.7 8.1E-05 36.8 3.5 30 68-97 84-113 (278)
37 cd07222 Pat_PNPLA4 Patatin-lik 72.4 17 0.00036 32.9 7.5 33 67-99 15-51 (246)
38 PLN02824 hydrolase, alpha/beta 72.1 4.5 9.7E-05 37.1 3.8 30 68-97 91-120 (294)
39 cd07223 Pat_PNPLA5-mammals Pat 71.7 18 0.00039 35.0 7.6 50 61-111 20-73 (405)
40 PRK13604 luxD acyl transferase 71.5 5.6 0.00012 37.2 4.2 34 65-98 94-127 (307)
41 PRK03592 haloalkane dehalogena 70.1 5.3 0.00011 36.7 3.8 29 69-97 83-111 (295)
42 cd07206 Pat_TGL3-4-5_SDP1 Tria 69.8 9.4 0.0002 35.6 5.3 32 67-98 85-116 (298)
43 PRK00870 haloalkane dehalogena 68.9 5.6 0.00012 36.7 3.7 29 69-97 105-133 (302)
44 PF12697 Abhydrolase_6: Alpha/ 68.8 6.9 0.00015 33.1 4.0 30 68-97 55-84 (228)
45 TIGR03101 hydr2_PEP hydrolase, 68.7 7.1 0.00015 35.8 4.2 30 68-97 88-117 (266)
46 cd07213 Pat17_PNPLA8_PNPLA9_li 68.1 14 0.00031 34.1 6.2 47 67-113 18-68 (288)
47 PRK11071 esterase YqiA; Provis 67.9 6.8 0.00015 33.8 3.8 29 70-98 52-80 (190)
48 PF09752 DUF2048: Uncharacteri 67.8 11 0.00024 35.8 5.4 41 60-100 156-196 (348)
49 PRK08775 homoserine O-acetyltr 64.8 7.9 0.00017 36.6 3.9 30 68-97 126-156 (343)
50 PLN02965 Probable pheophorbida 64.0 7.2 0.00016 35.0 3.3 29 69-97 61-90 (255)
51 cd07217 Pat17_PNPLA8_PNPLA9_li 63.6 24 0.00051 33.7 6.8 38 77-114 39-76 (344)
52 TIGR01392 homoserO_Ac_trn homo 62.9 8.7 0.00019 36.5 3.8 30 68-97 115-145 (351)
53 PF06057 VirJ: Bacterial virul 62.4 18 0.00039 31.3 5.2 90 1-103 3-92 (192)
54 PLN02679 hydrolase, alpha/beta 61.6 9.3 0.0002 36.5 3.8 28 69-96 145-172 (360)
55 TIGR03343 biphenyl_bphD 2-hydr 61.5 9.1 0.0002 34.5 3.5 30 69-98 91-120 (282)
56 cd01819 Patatin_and_cPLA2 Pata 61.3 16 0.00036 30.3 4.8 31 67-97 14-46 (155)
57 PRK10673 acyl-CoA esterase; Pr 60.3 11 0.00023 33.4 3.8 28 71-98 73-100 (255)
58 TIGR01250 pro_imino_pep_2 prol 58.9 11 0.00023 33.6 3.5 29 70-98 87-115 (288)
59 PRK10349 carboxylesterase BioH 58.7 12 0.00026 33.4 3.8 27 71-97 66-92 (256)
60 KOG2872|consensus 58.4 86 0.0019 29.1 8.9 169 3-176 159-355 (359)
61 cd07211 Pat_PNPLA8 Patatin-lik 58.3 38 0.00083 31.6 7.2 48 67-114 24-77 (308)
62 PF00561 Abhydrolase_1: alpha/ 58.2 14 0.0003 31.8 4.0 29 69-97 34-62 (230)
63 PRK07581 hypothetical protein; 57.0 11 0.00023 35.6 3.3 26 72-97 116-142 (339)
64 PLN02578 hydrolase 56.8 13 0.00027 35.5 3.8 30 69-98 142-171 (354)
65 TIGR02427 protocat_pcaD 3-oxoa 56.8 12 0.00025 32.4 3.3 31 69-99 69-99 (251)
66 TIGR03611 RutD pyrimidine util 56.4 13 0.00029 32.4 3.6 30 69-98 70-99 (257)
67 PF07819 PGAP1: PGAP1-like pro 55.3 41 0.00089 29.9 6.6 21 77-97 83-103 (225)
68 PRK00175 metX homoserine O-ace 55.1 15 0.00032 35.4 4.0 31 68-98 135-166 (379)
69 PRK06765 homoserine O-acetyltr 54.6 16 0.00034 35.6 4.0 30 68-97 149-179 (389)
70 PLN02894 hydrolase, alpha/beta 54.1 15 0.00034 35.7 3.9 28 70-97 167-194 (402)
71 TIGR03695 menH_SHCHC 2-succiny 52.4 16 0.00034 31.4 3.5 29 71-99 62-90 (251)
72 PF12000 Glyco_trans_4_3: Gkyc 51.4 16 0.00035 31.1 3.1 20 69-88 56-75 (171)
73 COG0596 MhpC Predicted hydrola 50.5 18 0.00038 30.9 3.4 30 68-97 77-106 (282)
74 PF00975 Thioesterase: Thioest 49.2 22 0.00047 31.0 3.8 30 68-97 54-84 (229)
75 PRK14875 acetoin dehydrogenase 48.2 21 0.00045 33.7 3.8 29 69-97 187-215 (371)
76 PF03958 Secretin_N: Bacterial 47.7 42 0.0009 24.1 4.5 32 145-176 44-75 (82)
77 PLN02211 methyl indole-3-aceta 47.1 22 0.00048 32.4 3.6 29 69-97 76-105 (273)
78 TIGR01738 bioH putative pimelo 45.7 27 0.00059 29.9 3.9 27 71-97 57-83 (245)
79 PLN02733 phosphatidylcholine-s 45.6 23 0.00051 35.0 3.7 27 71-97 154-180 (440)
80 TIGR03100 hydr1_PEP hydrolase, 45.6 30 0.00064 31.6 4.2 31 67-97 86-118 (274)
81 COG3946 VirJ Type IV secretory 45.6 61 0.0013 31.6 6.2 18 74-91 321-338 (456)
82 PRK06489 hypothetical protein; 43.4 27 0.00058 33.2 3.7 24 74-97 148-172 (360)
83 TIGR01249 pro_imino_pep_1 prol 42.6 29 0.00064 32.0 3.8 28 71-98 87-114 (306)
84 PRK03204 haloalkane dehalogena 42.6 28 0.00061 31.9 3.6 29 69-97 91-119 (286)
85 PF01734 Patatin: Patatin-like 42.0 27 0.00058 29.0 3.2 31 67-97 14-45 (204)
86 cd07199 Pat17_PNPLA8_PNPLA9_li 41.5 1.2E+02 0.0026 27.4 7.5 34 80-113 35-69 (258)
87 cd00707 Pancreat_lipase_like P 41.3 42 0.0009 30.8 4.5 31 68-98 98-131 (275)
88 cd07216 Pat17_PNPLA8_PNPLA9_li 40.9 87 0.0019 29.2 6.6 37 80-116 43-80 (309)
89 PLN03087 BODYGUARD 1 domain co 40.2 29 0.00063 34.8 3.4 27 71-97 266-292 (481)
90 TIGR03607 patatin-related prot 39.3 58 0.0013 34.5 5.5 24 75-98 62-85 (739)
91 PF01764 Lipase_3: Lipase (cla 38.5 44 0.00096 26.5 3.8 23 75-97 60-82 (140)
92 PRK10749 lysophospholipase L2; 36.8 41 0.00088 31.6 3.8 23 75-97 127-149 (330)
93 TIGR03230 lipo_lipase lipoprot 35.3 68 0.0015 31.8 5.1 30 68-97 105-137 (442)
94 TIGR03712 acc_sec_asp2 accesso 35.0 1.8E+02 0.0039 29.2 7.7 44 55-103 336-381 (511)
95 PF03190 Thioredox_DsbH: Prote 34.8 45 0.00097 28.2 3.2 35 233-269 9-47 (163)
96 PF00756 Esterase: Putative es 34.6 27 0.0006 30.9 2.1 29 69-97 102-133 (251)
97 KOG1454|consensus 34.2 47 0.001 31.4 3.7 30 69-98 118-147 (326)
98 PRK05096 guanosine 5'-monophos 34.2 1.2E+02 0.0026 28.8 6.2 115 122-274 70-188 (346)
99 PF05728 UPF0227: Uncharacteri 33.7 53 0.0012 28.3 3.7 27 71-97 51-77 (187)
100 cd00519 Lipase_3 Lipase (class 33.3 51 0.0011 29.0 3.6 21 77-97 126-146 (229)
101 PRK10985 putative hydrolase; P 32.8 51 0.0011 30.8 3.7 26 71-96 122-148 (324)
102 PRK01060 endonuclease IV; Prov 32.6 2.8E+02 0.006 25.1 8.5 49 132-181 14-63 (281)
103 PF06821 Ser_hydrolase: Serine 32.5 35 0.00076 28.9 2.3 18 79-96 55-72 (171)
104 PF03959 FSH1: Serine hydrolas 32.5 55 0.0012 28.6 3.6 27 69-96 93-119 (212)
105 PF06259 Abhydrolase_8: Alpha/ 32.4 2.5E+02 0.0055 24.0 7.5 17 81-97 111-127 (177)
106 COG4188 Predicted dienelactone 31.9 42 0.00091 32.2 2.9 34 78-111 158-191 (365)
107 PHA02857 monoglyceride lipase; 31.6 56 0.0012 29.3 3.7 23 75-97 93-115 (276)
108 PF09383 NIL: NIL domain; Int 31.2 84 0.0018 22.3 3.9 26 158-183 50-75 (76)
109 KOG2564|consensus 30.3 44 0.00095 31.0 2.6 31 68-98 135-165 (343)
110 cd02394 vigilin_like_KH K homo 29.9 1.1E+02 0.0024 20.5 4.2 42 132-174 19-61 (62)
111 PLN02298 hydrolase, alpha/beta 29.9 64 0.0014 30.0 3.9 30 68-97 120-152 (330)
112 COG3208 GrsT Predicted thioest 29.7 35 0.00076 30.7 1.9 18 79-96 74-91 (244)
113 cd07214 Pat17_isozyme_like Pat 29.2 2E+02 0.0044 27.4 7.1 37 79-115 43-86 (349)
114 PLN02872 triacylglycerol lipas 29.2 96 0.0021 30.2 5.0 30 68-97 149-178 (395)
115 PF05677 DUF818: Chlamydia CHL 28.7 63 0.0014 30.8 3.4 30 67-96 199-232 (365)
116 PLN02385 hydrolase; alpha/beta 28.4 52 0.0011 31.1 3.0 19 79-97 162-180 (349)
117 TIGR01836 PHA_synth_III_C poly 28.2 69 0.0015 30.3 3.8 26 72-97 129-154 (350)
118 PF05798 Phage_FRD3: Bacteriop 27.8 1.4E+02 0.0031 21.0 4.2 43 130-173 9-55 (75)
119 PRK10566 esterase; Provisional 27.3 70 0.0015 28.2 3.5 28 70-97 95-125 (249)
120 cd00741 Lipase Lipase. Lipase 26.6 87 0.0019 25.5 3.7 21 77-97 26-46 (153)
121 PF09968 DUF2202: Uncharacteri 26.6 19 0.00041 30.3 -0.4 95 68-183 44-147 (162)
122 PF01709 Transcrip_reg: Transc 26.0 1.2E+02 0.0026 27.2 4.7 90 129-222 142-233 (234)
123 KOG4409|consensus 25.6 74 0.0016 30.4 3.3 28 70-97 150-178 (365)
124 COG1647 Esterase/lipase [Gener 25.5 1.2E+02 0.0026 27.2 4.3 35 67-101 73-107 (243)
125 PF05277 DUF726: Protein of un 25.5 75 0.0016 30.3 3.4 28 69-96 208-237 (345)
126 PF11187 DUF2974: Protein of u 25.5 1E+02 0.0022 27.4 4.1 32 67-98 72-103 (224)
127 PF10230 DUF2305: Uncharacteri 24.9 48 0.001 30.3 2.0 20 77-96 82-101 (266)
128 PF05057 DUF676: Putative seri 24.8 4.1E+02 0.009 23.1 7.9 21 78-98 77-97 (217)
129 PRK05855 short chain dehydroge 24.6 1E+02 0.0022 31.0 4.5 31 69-99 83-114 (582)
130 PRK01415 hypothetical protein; 23.4 1.7E+02 0.0037 26.5 5.1 42 134-177 25-67 (247)
131 PF12695 Abhydrolase_5: Alpha/ 23.4 68 0.0015 25.2 2.4 22 77-98 59-80 (145)
132 TIGR01305 GMP_reduct_1 guanosi 22.7 2.6E+02 0.0055 26.7 6.2 81 163-274 105-187 (343)
133 PRK00110 hypothetical protein; 22.4 5.8E+02 0.013 23.1 8.4 89 131-223 146-236 (245)
134 PLN02442 S-formylglutathione h 21.9 1E+02 0.0022 28.3 3.5 24 74-97 138-161 (283)
135 PRK11460 putative hydrolase; P 21.8 1.2E+02 0.0026 26.8 3.9 24 74-97 96-121 (232)
136 PLN03084 alpha/beta hydrolase 21.8 1.1E+02 0.0024 29.5 3.9 28 69-96 187-214 (383)
137 PRK05320 rhodanese superfamily 21.3 4.4E+02 0.0095 23.9 7.5 42 134-177 23-65 (257)
138 PF09419 PGP_phosphatase: Mito 21.2 1.5E+02 0.0033 25.1 4.1 55 173-227 35-91 (168)
139 COG1054 Predicted sulfurtransf 21.2 2.7E+02 0.0059 26.0 5.9 52 135-188 26-79 (308)
140 TIGR02821 fghA_ester_D S-formy 21.0 1.1E+02 0.0024 27.7 3.6 28 71-98 127-157 (275)
141 PRK05077 frsA fermentation/res 20.9 1.1E+02 0.0023 30.1 3.6 30 68-97 251-283 (414)
142 PF00151 Lipase: Lipase; Inte 20.8 1.6E+02 0.0035 27.9 4.7 28 70-97 138-168 (331)
143 PRK04940 hypothetical protein; 20.5 2.4E+02 0.0052 24.2 5.2 20 78-97 59-78 (180)
No 1
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=100.00 E-value=7.4e-59 Score=437.76 Aligned_cols=271 Identities=37% Similarity=0.607 Sum_probs=241.2
Q ss_pred EEEecCCCcchHHHHHHHHhhcHHHHHH---HHHH----hCCCHHHHhccccc-ccccCCchhHHHHHHHHHHHHHHHHH
Q psy2373 3 TYLFPGQGSQYVGMGQLLFDKFPDIIEK---SNNI----LGYSIKELCLKNSK-NQLNKTEYTQPALYIVNALSYRDHIK 74 (358)
Q Consensus 3 ~fvF~Gqg~~~~~~~~~L~~~~~~~~~~---~~~~----lg~~l~~~~~~~~~-~~~~~~~~~~~~l~~~q~~a~~~~l~ 74 (358)
+|+|||||+||+|||++||+.+|.|.+. |+++ +|+++.+++..++. ..+.++.++||++|++| ++++++|+
T Consensus 1 vFlFpGQGsq~~gMg~~L~~~~p~f~~~~~~~~~~l~~~~g~~l~~~l~~~~~~~~l~~~~~~qpai~~~~-~al~~~l~ 79 (318)
T PF00698_consen 1 VFLFPGQGSQYPGMGRDLYENNPVFRETIDRCDEILKELLGFSLLELLFEGPESEDLNDTEYAQPAIFAIQ-VALARLLR 79 (318)
T ss_dssp EEEE--TTS--TTTTHHHHHH-HHHHHHHHHHHHHHTSHHTS-HHHHHHHTTHCHHHTSHHHHHHHHHHHH-HHHHHHHH
T ss_pred cEEECCcchhhHhHHHHHHHcChhhHHHHHhhhhhhhcccccchhhhhhcccccccccchheecchhhhhh-hhhhhhhc
Confidence 6999999999999999999997766554 5544 48999988887664 67889999999999999 89999999
Q ss_pred HhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC-CCCceEEEcCCCHHHHHHHHHhcCCCceEEeccc
Q psy2373 75 NTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV-LDGAMAAVIGINYKKILNILKENNLNTIDIANYN 153 (358)
Q Consensus 75 ~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~-~~g~m~aV~~~~~~~~~~~l~~~~~~~v~ia~~n 153 (358)
++|++|++++|||+||++|+++||++|++|+++++..|+++|.+. ..|.|++|.. ++.+..+.. .++++||++|
T Consensus 80 ~~Gi~P~~v~GhSlGE~aA~~aaG~ls~e~a~~lv~~R~~~m~~~~~~g~m~av~~---~~~~~~~~~--~~~v~ia~~N 154 (318)
T PF00698_consen 80 SWGIKPDAVIGHSLGEYAALVAAGALSLEDALRLVYERARLMDEAAPPGAMLAVRG---EEEEEKLAL--PPDVEIANIN 154 (318)
T ss_dssp HTTHCESEEEESTTHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHSTSEEEEEEES---HHHHHHHHT--TTTEEEEEEE
T ss_pred ccccccceeeccchhhHHHHHHCCccchhhhhhhHHHHHHHHHHhhhcccccchhh---hHHhhhccc--cccceeeeec
Confidence 999999999999999999999999999999999999999999875 5689999954 333334332 2789999999
Q ss_pred CCCcEEEEcchhhHHHHHHHHHhCCcEEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCCCcccChh-HH
Q psy2373 154 TLNQIIIAGPKNDINNAQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIE-KI 232 (358)
Q Consensus 154 sp~~~visG~~~~l~~l~~~l~~~g~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~~-~~ 232 (358)
+|+++||||+.++++++.+.+++.|+.++.|++++|||||+|+++.+++.+.+..+.+++|++|+||+++|+.++++ ..
T Consensus 155 s~~q~visG~~~~l~~~~~~l~~~~~~~~~l~v~~afHs~~m~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~~~~~ 234 (318)
T PF00698_consen 155 SPRQVVISGEREALEALVERLKAEGIKAKRLPVSYAFHSPLMEPAADEFREALESIEFRPPKIPVYSNVTGRPYDDPELI 234 (318)
T ss_dssp ETTEEEEEEEHHHHHHHHHHHHHTTSEEEEESSSSETTSGGGHHHHHHHHHHHHTSCSCCCSSEEEETTTSSBEHSHHHH
T ss_pred cccccccCCCHHHHHHHHHHhhccceeEEEeeeeccccCchhhhhHHHHHhhhhccccccccccceeecccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988554 44
Q ss_pred HHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHh
Q psy2373 233 TNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKN 281 (358)
Q Consensus 233 ~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~ 281 (358)
.+||.+|+++||+|.++++++.++ |.++||||||+++|+.+++++++
T Consensus 235 ~~~~~~~l~~pV~f~~~v~~l~~~--g~~~fiEiGP~~~L~~~~~~~l~ 281 (318)
T PF00698_consen 235 AEYWARQLRSPVRFREAVEALYED--GVRVFIEIGPGSVLTSLVKRILK 281 (318)
T ss_dssp HHHHHHHHHSHEEHHHHHHHHHHT--TEEEEEEESSSSHHHHHHHHHST
T ss_pred hhHHHhccCCcCChHHHHHHHHhc--CCCEEEEeCchHHHHHHHHHHHh
Confidence 689999999999999999999988 99999999999999999999998
No 2
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=100.00 E-value=3.6e-55 Score=407.75 Aligned_cols=278 Identities=45% Similarity=0.804 Sum_probs=256.4
Q ss_pred CEEEEecCCCcchHHHHHHHHhhcHHH---HHHHHHHhCCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHHHhC
Q psy2373 1 MKTYLFPGQGSQYVGMGQLLFDKFPDI---IEKSNNILGYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIKNTG 77 (358)
Q Consensus 1 ~i~fvF~Gqg~~~~~~~~~L~~~~~~~---~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~~~G 77 (358)
+++|+|||||++|++|+++||+.+|.| +++|++++|+++.+++.+.+.+.+.++.++|+++|++| ++++++|+++|
T Consensus 2 ~~~~~f~Gqg~~~~~m~~~l~~~~p~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~q~~i~~~~-~al~~~l~~~g 80 (290)
T TIGR00128 2 KIAYVFPGQGSQTVGMGKDLYEQYPIAKELFDQASEALGYDLKKLCQEGPAEELNKTQYTQPALYVVS-AILYLKLKEQG 80 (290)
T ss_pred CEEEEECCCCcchhhhHHHHHHcCHHHHHHHHHHHHHhCcCHHHHHhCCCHHHhccccchhHHHHHHH-HHHHHHHHHcC
Confidence 489999999999999999999988855 56677789999998887655556788999999999999 89999999999
Q ss_pred -CCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC---CCceEEEcCCCHHHHHHHHHhcCCCceEEeccc
Q psy2373 78 -EYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL---DGAMAAVIGINYKKILNILKENNLNTIDIANYN 153 (358)
Q Consensus 78 -v~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~~---~g~m~aV~~~~~~~~~~~l~~~~~~~v~ia~~n 153 (358)
++|++++|||+|||+|++++|++|++|+++++..|+++|++.. .|+|++|.+.+.+++++.+++++...++|+++|
T Consensus 81 ~i~p~~v~GhS~GE~aAa~~aG~ls~eda~~lv~~r~~~~~~~~~~~~g~m~av~~~~~~~~~~~l~~~~~~~v~ia~~n 160 (290)
T TIGR00128 81 GLKPDFAAGHSLGEYSALVAAGALDFETALKLVKKRGELMQEAVPEGGGAMAAVIGLDEEQLAQACEEATENDVDLANFN 160 (290)
T ss_pred CCCCCEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEeCCCHHHHHHHHHhcCCCcEEEEEEC
Confidence 9999999999999999999999999999999999999998764 578988889999999999998753469999999
Q ss_pred CCCcEEEEcchhhHHHHHHHHHhCCc-EEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCCCcccCh-hH
Q psy2373 154 TLNQIIIAGPKNDINNAQIFFEKNNA-IYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EK 231 (358)
Q Consensus 154 sp~~~visG~~~~l~~l~~~l~~~g~-~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~-~~ 231 (358)
+|+++||||+++.++++.+.+++.++ +.++|++++||||++|+++.+++.+.+..+.+.+|++|++|+++|+.++. +.
T Consensus 161 sp~~~visG~~~~l~~l~~~l~~~~~~~~~~L~v~~~fHs~~l~~~~~~~~~~l~~~~~~~p~ipi~S~~~g~~~~~~~~ 240 (290)
T TIGR00128 161 SPGQVVISGTKDGVEAAAALFKEMGAKRAVPLEVSGAFHSRFMKPAAEKFAETLEACQFNDPTVPVISNVDAKPYTNGDR 240 (290)
T ss_pred CCCCEEEECCHHHHHHHHHHHHHcCCCeEEEcCCCCCcccHHHHHHHHHHHHHHHcCCCCCCCccEEECCCCCccCCHHH
Confidence 99999999999999999999998887 68899999999999999999999999999999999999999999998865 56
Q ss_pred HHHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHh
Q psy2373 232 ITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKN 281 (358)
Q Consensus 232 ~~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~ 281 (358)
+.+||.+++++||+|.++++.+.++ |.+.|||+||+++|+++++++++
T Consensus 241 ~~~~~~~~l~~pV~f~~~i~~l~~~--g~~~~ie~gp~~~l~~~~~~~~~ 288 (290)
T TIGR00128 241 IKEKLSEQLTSPVRWTDSVEKLMAR--GVTEFAEVGPGKVLTGLIKRIKN 288 (290)
T ss_pred HHHHHHHHccCCccHHHHHHHHHHC--CCCEEEEECCchHHHHHHHHhcC
Confidence 6799999999999999999999999 99999999999999999999865
No 3
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=100.00 E-value=2e-55 Score=405.62 Aligned_cols=283 Identities=40% Similarity=0.684 Sum_probs=263.6
Q ss_pred CEEEEecCCCcchHHHHHHHHhhcH---HHHHHHHHHhCCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHHHhC
Q psy2373 1 MKTYLFPGQGSQYVGMGQLLFDKFP---DIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIKNTG 77 (358)
Q Consensus 1 ~i~fvF~Gqg~~~~~~~~~L~~~~~---~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~~~G 77 (358)
+++|+|||||+||.||+++||+.++ +.++++++.+++++..++.+.+++.+..+.++||++++++ ++.++.|++.|
T Consensus 3 ~~A~~FpGQGsQ~~gMg~~l~~~~~~a~~~~~~a~~~l~~~l~~i~~~~p~~~L~~T~~tQPal~~~s-~a~~~~l~~~~ 81 (310)
T COG0331 3 KTAFVFPGQGSQSLGMGKDLYENSPEAKETFDEADEALGFDLWALVFEGPEEELNLTQNTQPALLLVS-LAAYRVLAEQG 81 (310)
T ss_pred cceEEeCCchHHHHHhHHHHHhccHHHHHHHHHHHHHhcccHHHHhcCCCHHHhcccchhhHHHHHHH-HHHHHHHHHhc
Confidence 4799999999999999999999976 5677788889999999999888889999999999999999 78888888766
Q ss_pred --CCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC---CCceEEEcCCCHHHHHHHHHhcCC-CceEEec
Q psy2373 78 --EYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL---DGAMAAVIGINYKKILNILKENNL-NTIDIAN 151 (358)
Q Consensus 78 --v~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~~---~g~m~aV~~~~~~~~~~~l~~~~~-~~v~ia~ 151 (358)
++|+.++|||+|||+|++++|++|++|+++++..||.+|++.. .|+|.+|.+++.++++++|++.+. ..++|++
T Consensus 82 ~~~~p~~~aGHSlGEysAl~~ag~~~~ed~~~Lv~~RG~~M~~a~p~~~g~Maav~gl~~e~v~~~~~~~~~~~~v~iaN 161 (310)
T COG0331 82 LGVKPDFVAGHSLGEYSALAAAGVLSFEDALKLVRKRGKLMQEAVPRGEGGMAAVLGLDDEQVEKACEEAAQGTVVEIAN 161 (310)
T ss_pred CCCCCceeecccHhHHHHHHHcccccHHHHHHHHHHHHHHHHHHccCCCccHHHHcCCCHHHHHHHHHHhccCCeEEEee
Confidence 8999999999999999999999999999999999999999864 389999999999999999998753 2699999
Q ss_pred ccCCCcEEEEcchhhHHHHHHHHHhCCcE-EEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCCCccc-Ch
Q psy2373 152 YNTLNQIIIAGPKNDINNAQIFFEKNNAI-YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPY-SI 229 (358)
Q Consensus 152 ~nsp~~~visG~~~~l~~l~~~l~~~g~~-~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~-~~ 229 (358)
+|+|.|+||||.+++++++.+.+++.|.+ ..+|+|++||||++|+|+.+++...+..+.+++|.+|++||++++++ +.
T Consensus 162 ~N~~~QiVIsG~~~ale~a~~~~~~~g~kr~i~l~vs~pfHs~lm~pa~~~~~~~l~~~~~~~~~ipvi~n~~~~~~~~~ 241 (310)
T COG0331 162 YNSPGQIVISGTKEALEKAAEILKEAGAKRAIPLPVSGPFHSPLMKPAADELAEALEKVRFSDPLVPVISNVDAKPVLDG 241 (310)
T ss_pred eCCCCcEEEECCHHHHHHHHHHHHHhhhhhhcccCCCchhhhhhhHHHHHHHHHHHHhcCCCCccceeeeccccccccCH
Confidence 99999999999999999999999999964 77899999999999999999999999999999999999999999885 56
Q ss_pred hHHHHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHhhccCC
Q psy2373 230 EKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYKKD 286 (358)
Q Consensus 230 ~~~~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~~~~~~ 286 (358)
+.+++.+.+|+..||+|.++++.+.+. |++.|+|+||+++|+++++++.+..+..
T Consensus 242 ~~i~~~L~~q~~~pVrW~etv~~l~~~--gv~~~~EiGpg~vL~gL~kri~~~~~~~ 296 (310)
T COG0331 242 EEIRELLAKQLTSPVRWTETVETLKAD--GVTRFVEIGPGKVLTGLAKRILKGLGVR 296 (310)
T ss_pred HHHHHHHHHHhcCCeeHHHHHHHHHhc--CceEEEEeCCcHHHHHHHHhhcCCCCce
Confidence 788999999999999999999999999 9999999999999999999999876555
No 4
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=100.00 E-value=3.9e-54 Score=409.29 Aligned_cols=278 Identities=33% Similarity=0.586 Sum_probs=252.5
Q ss_pred EEEEecCCCcchHHHHHHHHhhcHHH---HHHHHHHhCCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy2373 2 KTYLFPGQGSQYVGMGQLLFDKFPDI---IEKSNNILGYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIKNTGE 78 (358)
Q Consensus 2 i~fvF~Gqg~~~~~~~~~L~~~~~~~---~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~~~Gv 78 (358)
++|+|||||+||+||+++ |+.+|.| ++++++.+|+++.+++...+.+.+.++.++||++|++| ++++++|+.+|+
T Consensus 40 ~a~lFpGQGsq~~gm~~~-~~~~p~~~~~~~~~~~~lg~~l~~~~~~~~~~~l~~~~~~qp~i~~~~-~a~~~~l~~~g~ 117 (343)
T PLN02752 40 TAFLFPGQGAQAVGMGKE-AAEVPAAKALFDKASEILGYDLLDVCVNGPKEKLDSTVVSQPAIYVAS-LAAVEKLRARDG 117 (343)
T ss_pred EEEEECCCCcchhhHHHH-HHhCHHHHHHHHHHHHHhCCCHHHHHhcCCHHHHhcchhhhHHHHHHH-HHHHHHHHhcCC
Confidence 799999999999999999 7887755 56667778999999887766666889999999999999 899999999997
Q ss_pred Cc------CEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC---CCCceEEEcCCCHHHHHHHHHhcCC-----
Q psy2373 79 YA------DFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV---LDGAMAAVIGINYKKILNILKENNL----- 144 (358)
Q Consensus 79 ~P------~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~---~~g~m~aV~~~~~~~~~~~l~~~~~----- 144 (358)
+| ++++|||+|||+|+|+||+++++|+++++..|+++|+.. ..|+|++|.+.+.+++++++++++.
T Consensus 118 ~~~~~~~~~~~~GHSlGE~aA~~~AG~ls~e~al~lv~~R~~~m~~~~~~~~g~m~av~g~~~~~~~~~l~~~~~~~~~~ 197 (343)
T PLN02752 118 GQAVIDSVDVCAGLSLGEYTALVFAGALSFEDGLKLVKLRGEAMQAAADAGPSGMVSVIGLDSDKVQELCAAANEEVGED 197 (343)
T ss_pred CcccccCCCeeeeccHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhccCCCccEEEEeCCCHHHHHHHHHHhhhccCCC
Confidence 54 678999999999999999999999999999999999865 3589999989999999999986531
Q ss_pred CceEEecccCCCcEEEEcchhhHHHHHHHHHhCC-cEEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCC
Q psy2373 145 NTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNN-AIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFE 223 (358)
Q Consensus 145 ~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g-~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~ 223 (358)
..++||++|+|+++||||+++.++++.+.+++.+ ++.++|++++|||||+|+++.+.+.+.+..+.+++|++|+|||++
T Consensus 198 ~~v~IA~~Nsp~~~vIsG~~~~l~~l~~~l~~~~~~~~~~L~v~~pfHsp~m~~~~~~l~~~l~~~~~~~p~ipviS~~t 277 (343)
T PLN02752 198 DVVQIANYLCPGNYAVSGGKKGIDAVEAKAKSFKARMTVRLAVAGAFHTSFMEPAVDALEAALAAVEIRTPRIPVISNVD 277 (343)
T ss_pred CeEEEEEEcCCCCEEEECcHHHHHHHHHHHHhcCCceEEECCCCCCcchHHHHHHHHHHHHHHhcCCCCCCCceEEEcCC
Confidence 4699999999999999999999999999998765 578999999999999999999999999999999999999999999
Q ss_pred CcccCh-hHHHHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHhhc
Q psy2373 224 ALPYSI-EKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEY 283 (358)
Q Consensus 224 g~~~~~-~~~~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~~~ 283 (358)
|+++.+ +.+.++|.+++++||+|.++++.+.+. |++.|||+||+++|+++++++.+..
T Consensus 278 g~~~~~~~~~~~~l~~~l~~PV~~~~~i~~l~~~--g~~~~iEiGP~~~L~~l~~~~~~~~ 336 (343)
T PLN02752 278 AQPHSDPATIKKILARQVTSPVQWETTVKTLLEK--GLEKSYELGPGKVIAGIVKRVDKGA 336 (343)
T ss_pred CCccCChHHHHHHHHHHCcCCEEHHHHHHHHHHC--CCCEEEEeCCcHHHHHHHHHhhCCC
Confidence 999865 566799999999999999999999998 9999999999999999999987543
No 5
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=100.00 E-value=5.2e-54 Score=400.91 Aligned_cols=273 Identities=27% Similarity=0.435 Sum_probs=249.6
Q ss_pred EEEEecCCCcchHHHHHHHHhhcH---HHHHHHHHHhCCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHHHhCC
Q psy2373 2 KTYLFPGQGSQYVGMGQLLFDKFP---DIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIKNTGE 78 (358)
Q Consensus 2 i~fvF~Gqg~~~~~~~~~L~~~~~---~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~~~Gv 78 (358)
++|+|||||+||+||+++| ..+| +.++++++.+++++.++ . +.+.+.++.++||++|++| ++++++|+++|+
T Consensus 1 ~~~~F~GqG~q~~~m~~~l-~~~p~~~~~~~~~~~~l~~~~~~~-~--~~~~l~~~~~~qp~i~~~q-~al~~~l~~~g~ 75 (295)
T TIGR03131 1 IALLFPGQGSQRAGMLAEL-PDHPAVAAVLAEASDVLGIDPREL-D--DAEALASTRSAQLCILAAG-VAAWRALLALLP 75 (295)
T ss_pred CEEEECCcchhhhhHHHHH-HhCHHHHHHHHHHHHHhCcCHHHc-C--CHhhhccchhhhHHHHHHH-HHHHHHHHhcCC
Confidence 5899999999999999999 4556 45566778899998774 2 2345678899999999999 899999999999
Q ss_pred CcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC--CCceEEEcCCCHHHHHHHHHhcCCCceEEecccCCC
Q psy2373 79 YADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL--DGAMAAVIGINYKKILNILKENNLNTIDIANYNTLN 156 (358)
Q Consensus 79 ~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~~--~g~m~aV~~~~~~~~~~~l~~~~~~~v~ia~~nsp~ 156 (358)
+|++++|||+||++|++++|++|++|+++++..|+++|+... +++|++|.+.+.++++++++++ .++||++|+|+
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG~~s~e~a~~lv~~r~~~~~~~~~~~~~m~av~~~~~~~~~~~l~~~---~v~ia~~Nsp~ 152 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAGVLTFDDALRLVALRAALMDQAVPGGYGMLAVLGLDLAAVEALIAKH---GVYLAIINAPD 152 (295)
T ss_pred CCcEEeecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCHHHHHHHHHHc---CEEEEEEcCCC
Confidence 999999999999999999999999999999999999998653 4579999899999999999876 39999999999
Q ss_pred cEEEEcchhhHHHHHHHHHhCCc-EEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCCCcccCh-hHHHH
Q psy2373 157 QIIIAGPKNDINNAQIFFEKNNA-IYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSI-EKITN 234 (358)
Q Consensus 157 ~~visG~~~~l~~l~~~l~~~g~-~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~-~~~~~ 234 (358)
++||||+++.++++.+.+++.|+ ++++|++++|||||+|+++.+++.+.+..+.+++|++|+||+++|++++. +.+.+
T Consensus 153 ~~visG~~~~l~~l~~~l~~~g~~~~~~l~v~~afHs~~~~~~~~~~~~~l~~~~~~~~~ip~~S~~~g~~~~~~~~~~~ 232 (295)
T TIGR03131 153 QVVIAGSRAALRAVAELARAAGASRAKRLAVRVPSHTPLLAKAAEQFAEALAEIPLAAPRLPYLSGIDARLVRDAAQIRD 232 (295)
T ss_pred CEEEECCHHHHHHHHHHHHhcCCceEEECCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCceEEECCCCeecCCHHHHHH
Confidence 99999999999999999999999 89999999999999999999999999999999999999999999998865 56679
Q ss_pred HHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHhhcc
Q psy2373 235 NLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYK 284 (358)
Q Consensus 235 ~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~~~~ 284 (358)
||.+++++||+|.++++.+.+. |.+.|||+||+++|++++++++++.+
T Consensus 233 ~~~~~l~~pV~~~~~i~~l~~~--g~~~~veiGp~~~l~~~~~~~~~~~~ 280 (295)
T TIGR03131 233 DLARQIATPVDWHDCMQAAYER--GARLVIELGPGDVLTKLANEAFPELP 280 (295)
T ss_pred HHHHHhcCCCcHHHHHHHHHHc--CCCEEEEeCChHHHHHHHHHhcCCCc
Confidence 9999999999999999999998 99999999999999999999987543
No 6
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=100.00 E-value=6.5e-53 Score=394.11 Aligned_cols=273 Identities=31% Similarity=0.476 Sum_probs=250.7
Q ss_pred ecCCCcchHHHHHHHHhhcHHHH---HHHHHHh----CCCHHHHhccccc--ccccCCchhHHHHHHHHHHHHHHHHHHh
Q psy2373 6 FPGQGSQYVGMGQLLFDKFPDII---EKSNNIL----GYSIKELCLKNSK--NQLNKTEYTQPALYIVNALSYRDHIKNT 76 (358)
Q Consensus 6 F~Gqg~~~~~~~~~L~~~~~~~~---~~~~~~l----g~~l~~~~~~~~~--~~~~~~~~~~~~l~~~q~~a~~~~l~~~ 76 (358)
|||||+||++|+++||+.+|.|. +++++++ |+++.+++...+. ..+.++.++||++|++| ++++++|+++
T Consensus 1 F~GQG~q~~~m~~~l~~~~~~~~~~~~~~~~~l~~~~g~~~~~~l~~~~~~~~~l~~~~~~q~~i~~~~-~a~~~~l~~~ 79 (298)
T smart00827 1 FTGQGSQWPGMGRELYETEPVFRAALDECDAALQPLLGWSLLDVLFGEDGAASLLRRTEVAQPALFAVQ-VALARLWRSW 79 (298)
T ss_pred CCCCchhHHHHHHHHHHcCHHHHHHHHHHHHHHHHhcCCCHHHHHcCCCCchhhhcccchhHHHHHHHH-HHHHHHHHHc
Confidence 89999999999999999877654 4555554 8999888875442 34678999999999999 8999999999
Q ss_pred CCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC-CCceEEEcCCCHHHHHHHHHhcCCCceEEecccCC
Q psy2373 77 GEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL-DGAMAAVIGINYKKILNILKENNLNTIDIANYNTL 155 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~~-~g~m~aV~~~~~~~~~~~l~~~~~~~v~ia~~nsp 155 (358)
|++|++++|||+|||+|++++|++|++|+++++..|+.+|++.. .|+|++| +.+.+++++.+++++ ..++||++|+|
T Consensus 80 Gi~p~~~~GhSlGE~aA~~~ag~~~~~~~l~l~~~r~~~~~~~~~~g~m~av-~~~~~~~~~~l~~~~-~~~~ia~~ns~ 157 (298)
T smart00827 80 GVRPDAVVGHSLGEIAAAYVAGVLSLEDAARLVAARGRLMQALPGGGAMLAV-GLSEEEVEELLAGYG-GRVSVAAVNGP 157 (298)
T ss_pred CCcccEEEecCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCCCCeEEEE-eCCHHHHHHHHHhcC-CcEEEEEEcCC
Confidence 99999999999999999999999999999999999999999765 4889999 999999999999875 67999999999
Q ss_pred CcEEEEcchhhHHHHHHHHHhCCcEEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCCCcccChh-HH-H
Q psy2373 156 NQIIIAGPKNDINNAQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIE-KI-T 233 (358)
Q Consensus 156 ~~~visG~~~~l~~l~~~l~~~g~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~~-~~-~ 233 (358)
+++||+|+++.++++.+.++.+++++++|++++|||||+|+++.+++.+.+..+.+.+|++|+||+++|+++++. .. +
T Consensus 158 ~~~visG~~~~l~~l~~~l~~~~~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~~~~pv~S~~~g~~~~~~~~~~~ 237 (298)
T smart00827 158 SSVVLSGDEDAVDELAAALEARGIRARRLKVDHAFHSPHMDPILDEFREALAGITPRPPRIPFVSTVTGELIDGAELDDA 237 (298)
T ss_pred CCEEEECCHHHHHHHHHHHHHCCceEEECCCCCCCchHHHHHHHHHHHHHHhhCCCCCCCCcEEeCCCCcccCCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998753 34 7
Q ss_pred HHHHHhcCCcccHHHHHHHHHh-cCCCCcEEEEECCchHHHHHHHHHHhhc
Q psy2373 234 NNLSNHLINPVKWFDSIYYLLN-KSKNEMEFMEIGPGTVLTKFIKSIKNEY 283 (358)
Q Consensus 234 ~~~~~~~~~pv~f~~~v~~~~~-~~~g~~~~veiGP~~~l~~~~~~~l~~~ 283 (358)
++|.+++++||+|.++++.+.+ . |.+.|||+||+++|+++++++++..
T Consensus 238 ~~l~~~l~~pV~~~~~i~~l~~~~--g~~~~ie~Gp~~~l~~~~~~~~~~~ 286 (298)
T smart00827 238 EYWVRNLREPVRFADAVRALLAEQ--GVTVFLEVGPHPVLTGPIKQTLPAA 286 (298)
T ss_pred HHHHHHhhccEeHHHHHHHHHHcC--CCcEEEEeCCcHHHHHHHHHHHhcc
Confidence 9999999999999999999996 6 8999999999999999999999764
No 7
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=100.00 E-value=3.8e-53 Score=415.36 Aligned_cols=295 Identities=16% Similarity=0.175 Sum_probs=251.1
Q ss_pred EEEEecCCCcchHHHHHHHHhhcHHHHHHHHHHhCCCHHHHhcccc-----cccccCCchhHHHHHH--HHHHHHHHHH-
Q psy2373 2 KTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNILGYSIKELCLKNS-----KNQLNKTEYTQPALYI--VNALSYRDHI- 73 (358)
Q Consensus 2 i~fvF~Gqg~~~~~~~~~L~~~~~~~~~~~~~~lg~~l~~~~~~~~-----~~~~~~~~~~~~~l~~--~q~~a~~~~l- 73 (358)
++|||||||+||+|||++||+.||.|.+.++++ .++.+.+..+. .....++.+.|+++|+ ++ ++++++|
T Consensus 183 vaFvFpGqGsqy~gMGr~L~~~~P~fr~~ld~~--~~L~~~L~~~~~~~~~~~~~~~~~l~q~alfav~~~-~aLa~ll~ 259 (538)
T TIGR02816 183 LAFVYPGVGTVYADMFNDFHQYFPALFAKLERE--GDLKAMLQAEDIYGEDPKHAAEMSLGDLAIAGVGSS-YLLTQLLC 259 (538)
T ss_pred EEEEECCCchHHHHHHHHHHhhCHHHHHHHHhc--CCHHHHhccccccccchhhhhhhhhHhHHHHHHHHH-HHHHHHHH
Confidence 799999999999999999999999999999986 47766664322 2224466788999995 47 7899999
Q ss_pred HHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCCCCc-------------------eEEEcCCCHHH
Q psy2373 74 KNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLDGA-------------------MAAVIGINYKK 134 (358)
Q Consensus 74 ~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~~~g~-------------------m~aV~~~~~~~ 134 (358)
+++||+|++++|||+|||+|+|+||+|+++|++.++..|+++|.....|. |++++..+.++
T Consensus 260 ~~~GI~Pdav~GHSlGE~aAa~aAGvls~~dal~~v~~rs~L~~~~~rG~mmavr~a~~~~~~~~~~~~~~avV~a~~~~ 339 (538)
T TIGR02816 260 DEFAIKPDFALGYSKGEASMWASLGVWKNPHALIEKTQTDPIFTSAISGKLTAVREAWQLDDTAAEIQWNSFVVRCEAAP 339 (538)
T ss_pred HhcCCCCCEEeecCHHHHHHHHHhCCCCcHHHHHHHHHhhHHhccccChhhhhhhhhhccccccccccccceeecCCHHH
Confidence 58999999999999999999999999999999999999988886544343 33455899999
Q ss_pred HHHHHHhcCCCceEEecccCCCcEEEEcchhhHHHHHHHHHhCCcEEEEccCCCC-----CccccchHHHHHHHHHhccC
Q psy2373 135 ILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAIYIPLNVSGP-----FHSRYMKPIYKKFNNFLLDF 209 (358)
Q Consensus 135 ~~~~l~~~~~~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g~~~~~L~v~~~-----fHs~~~~~~~~~~~~~l~~~ 209 (358)
++++|... ++++||++|+ .++||||+.++|+++.+.++++|+++++|++.++ |||++|+++.+++...+
T Consensus 340 V~~~L~~~--~~V~IAaiN~-~q~VISG~~~Ai~~l~~~L~~~Gi~~r~L~a~HA~pam~~HS~~me~~l~~f~~~l--- 413 (538)
T TIGR02816 340 IEALLKDF--PHAYLAIIQG-DTCVIAGCEAQCKALLAALGKRGIAANRVTAMHTQPALQEHQNVMDFYLQPLCAEL--- 413 (538)
T ss_pred HHHHhccC--CCeEEEEeCC-CCeEeeCCHHHHHHHHHHHHhCCeeeeeccccccCcccccccHHHHHHHHHHHhhc---
Confidence 99999876 4699999998 7999999999999999999999999999999998 89999999999988765
Q ss_pred CCCCCCccEEeCCC--Ccc------cChhHHHHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHh
Q psy2373 210 VFHSPNIPVISNFE--ALP------YSIEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKN 281 (358)
Q Consensus 210 ~~~~p~ip~~S~~~--g~~------~~~~~~~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~ 281 (358)
+|++|+|||++ |++ .+.+.+.+||.+|+++||+|.++++++.++ |+++||||||+++|+++++++++
T Consensus 414 ---~p~ip~iSnvt~tG~~~~~~~~~d~~~ia~yw~~ql~~PVrF~~~I~~L~~~--Gv~~FVEIGPg~vLs~lv~~~l~ 488 (538)
T TIGR02816 414 ---PMDIKFISAADLLAKNQNSEQAIDSQSIANSIADTFCQTLDFTALIHHAQEQ--GAKLFVEIGADRQNCTLIDKINK 488 (538)
T ss_pred ---ccCCeeeecccccCcccCCCcCCCHHHHHHHHHHcCCCccCHHHHHHHHHHC--CCCEEEEeCCChHHHHHHHHHhh
Confidence 68999999984 543 234556799999999999999999999999 99999999999999999999987
Q ss_pred hccC--------Ccc------------chhhHHHHhhhhhhccccccCC
Q psy2373 282 EYKK--------DCV------------IKDDILEQSQEKKIEKWNNKYP 310 (358)
Q Consensus 282 ~~~~--------~~~------------~~~~~~~l~~~~~~~~w~~~~~ 310 (358)
..+. ..+ ....++.||..|..+||..+++
T Consensus 489 ~~~~~~~~~~~~~~l~sl~r~~~d~~~ll~aLA~L~~~Gv~vdW~~l~~ 537 (538)
T TIGR02816 489 QDGASSEQHQPCCTVAANAKGGEDITSLIKAIAQLISHQIPLSLQPFID 537 (538)
T ss_pred cccccccccccceEeccCCCCCchHHHHHHHHHHHHHCCCCCCchhcCC
Confidence 5421 111 1233499999999999999875
No 8
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=100.00 E-value=1.3e-51 Score=460.26 Aligned_cols=305 Identities=27% Similarity=0.376 Sum_probs=265.0
Q ss_pred CEEEEecCCCcchHHHHHHHHhhcHHHHHH---HHHHh----CCCHHHHhccc----------ccccccCCchhHHHHHH
Q psy2373 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEK---SNNIL----GYSIKELCLKN----------SKNQLNKTEYTQPALYI 63 (358)
Q Consensus 1 ~i~fvF~Gqg~~~~~~~~~L~~~~~~~~~~---~~~~l----g~~l~~~~~~~----------~~~~~~~~~~~~~~l~~ 63 (358)
+++|+|||||+||+|||++||+.+|.|.+. |++.+ +.++.++++.. ..+.+.++.++||+||+
T Consensus 580 kvaflFpGQGSQy~gMgreL~~~~P~fr~~ld~~d~~l~~~~~~~L~~~l~p~~~~~~~~~~~~~~~L~~t~~aQPaI~a 659 (2582)
T TIGR02813 580 KVAALFAGQGSQYLNMGRELACNFPEVRQAAADMDSVFTQAGKGALSPVLYPIPVFNDESRKAQEEALTNTQHAQSAIGT 659 (2582)
T ss_pred ceEEEeCCCCchhHHHHHHHHhcCHHHHHHHHHHHHHhhhhcCCcHHHHhccccccccccccchhhhhccchhHHHHHHH
Confidence 379999999999999999999998877655 44444 34566654321 12357789999999999
Q ss_pred HHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCC----CCceEEEcC---CCHHHHH
Q psy2373 64 VNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVL----DGAMAAVIG---INYKKIL 136 (358)
Q Consensus 64 ~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~~----~g~m~aV~~---~~~~~~~ 136 (358)
+| ++++++|+++|++|++++|||+|||+|+|+||+||++|++++++.|+++|.... .|+|++|.. .+.+.++
T Consensus 660 ~q-~Al~~lL~~~Gi~Pd~v~GHSlGE~aAa~aAGvls~edal~Lv~~Rg~lm~~~~~~~~~G~M~AV~l~~~~~~~~v~ 738 (2582)
T TIGR02813 660 LS-MGQYKLFTQAGFKADMTAGHSFGELSALCAAGVISDDDYMMLAFSRGQAMAAPTGEADIGFMYAVILAVVGSPTVIA 738 (2582)
T ss_pred HH-HHHHHHHHHcCCccceeecCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhcccCCCCceeEEEEccccccHHHHH
Confidence 99 899999999999999999999999999999999999999999999999998754 378999832 2456777
Q ss_pred HHHHhcCCCceEEecccCCCcEEEEcchhhHHHHHHHHHhCCcEEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCc
Q psy2373 137 NILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNI 216 (358)
Q Consensus 137 ~~l~~~~~~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~i 216 (358)
+.+..+ ++++|||+|+|+++||||+.++++++.+.++++|+++++|+|+++|||++|+++.++|.+.+..+.++.|.+
T Consensus 739 ~~l~~~--~~V~IA~~NsP~qvVISG~~~ai~~l~~~L~~~Gi~a~~L~Vs~AFHSplm~~a~~~f~~~L~~i~~~~P~i 816 (2582)
T TIGR02813 739 NCIKDF--EGVSIANYNSPTQLVIAGVSTQIQIAAKALKEKGFKAIPLPVSGAFHTPLVAHAQKPFSAAIDKAKFNTPLV 816 (2582)
T ss_pred HHhccC--CCEEEEEEecCCCEEEECCHHHHHHHHHHHHhCCCeEEECCCCCCcCcHHHHHHHHHHHHHHhhCCCCCCCc
Confidence 777655 579999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEeCCCCcccC--hhHHHHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHhhccCC--ccc---
Q psy2373 217 PVISNFEALPYS--IEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYKKD--CVI--- 289 (358)
Q Consensus 217 p~~S~~~g~~~~--~~~~~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~~~~~~--~~~--- 289 (358)
|+|||++|+++. .+.+++||.+|+++||+|.+++++++++ |.++|||+||+++|+++++++++..... .+.
T Consensus 817 pv~SnvtG~~~~~~~~~i~~~~~~ql~~PV~F~~aIe~l~~~--G~~~FVEiGPg~vLt~lv~~il~~~~~~~~~v~~~~ 894 (2582)
T TIGR02813 817 PLYSNGTGKLHSNDAAAIKKALKNHMLQSVHFSEQLEAMYAA--GARVFVEFGPKNILQKLVENTLKDKENELCAISINP 894 (2582)
T ss_pred eEEECCCCeEecCchhhHHHHHHHHhhCeecHHHHHHHHHHC--CCCEEEEcCCcHHHHHHHHHHhhccCCCeeEEeecc
Confidence 999999999885 3567899999999999999999999999 9999999999999999999999875422 111
Q ss_pred ----------hhhHHHHhhhhhhccccccCC
Q psy2373 290 ----------KDDILEQSQEKKIEKWNNKYP 310 (358)
Q Consensus 290 ----------~~~~~~l~~~~~~~~w~~~~~ 310 (358)
...+++||..|..++|-..+.
T Consensus 895 ~~~~~~~~~l~~a~~~L~~~G~~v~~~~~~~ 925 (2582)
T TIGR02813 895 NPKGDSDMQLRQAAVQLAVLGLELTEIDPYQ 925 (2582)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCccccc
Confidence 112389999999999887663
No 9
>KOG2926|consensus
Probab=100.00 E-value=2.8e-44 Score=322.11 Aligned_cols=281 Identities=30% Similarity=0.525 Sum_probs=253.3
Q ss_pred CEEEEecCCCcchHHHHHHHHhh--cHHHHHHHHHHhCCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHHHhC-
Q psy2373 1 MKTYLFPGQGSQYVGMGQLLFDK--FPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIKNTG- 77 (358)
Q Consensus 1 ~i~fvF~Gqg~~~~~~~~~L~~~--~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~~~G- 77 (358)
+.+++|||||+||.||++.+++. .++.+++|.+++|+++++++.+++.+.++++.++||+|++.. ++..+.|+.++
T Consensus 63 ~s~iLFPGQG~q~vgm~q~~l~~p~a~~~~~~A~~vl~YdLlki~~~gP~e~ldrT~~~QpAI~~~S-lAa~E~l~~~~p 141 (386)
T KOG2926|consen 63 TSVILFPGQGAQSVGMGQYLLQNPAARRLFAEASNVLGYDLLKICVNGPKEKLDRTVIAQPAIDVSS-LAALEQLRLLGP 141 (386)
T ss_pred ceEEEeCCCChhhhhhhHHHHhCcchhHHHHHHHHHhhHHHHHHHhcCccchhhcccccccceeccc-HHHHHhccccCc
Confidence 46899999999999999999875 678999999999999999999999999999999999999998 78889998888
Q ss_pred --CC-cCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcC---CCCceEEEcCCCHHHHHHHHHhcC-------C
Q psy2373 78 --EY-ADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQV---LDGAMAAVIGINYKKILNILKENN-------L 144 (358)
Q Consensus 78 --v~-P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~---~~g~m~aV~~~~~~~~~~~l~~~~-------~ 144 (358)
++ -++..|||+|||+|++.+|+++++++++++..|+..|+.. ..++|..+++.+..++..++...+ .
T Consensus 142 ~~ie~~~~~aGfSlGEy~alvfa~aLsFs~alKlVk~Ra~AMs~a~~~~~~~m~~~~~~p~sk~~~~~~~a~~~~~~qe~ 221 (386)
T KOG2926|consen 142 SIIENLVVTAGFSLGEYAALVFAGALSFSSALKLVKARAEAMSEASELVASGMVMILGLPTSKVQKACASANQLSASQEY 221 (386)
T ss_pred chhheeeeeccccHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccceeecCcHhHHHHHHhhhHHHhhhccC
Confidence 44 4678899999999999999999999999999999999875 457888887888888888776543 1
Q ss_pred CceEEecccCCCcEEEEcchhhHHHHHHHHHhCCcE-EEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCC
Q psy2373 145 NTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAI-YIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFE 223 (358)
Q Consensus 145 ~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g~~-~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~ 223 (358)
+.+.||++|+|+++||+|..++|+-+.+..++.+++ .++|.|++||||++|+|+.+.+.+.+..++++.|.+|+|||++
T Consensus 222 ~~~~VANyl~~~~~VvsG~~~~Le~lee~~~sf~~~r~~~LaVsgAFHTr~MepAvepl~~Al~~vei~~p~~pViSNvd 301 (386)
T KOG2926|consen 222 PVCEVANYLSPGQRVVSGLVKALESLEENAKSFKIRRMKRLAVSGAFHTRLMEPAVEPLTKALKAVEIKNPVIPVISNVD 301 (386)
T ss_pred CeeeeeccCCCCcEEeeCcHHHHHHHHHHHHhhhhhhheeeeeccccchhhhhhhHHHHHHHHHHHHhcCCCcceeecCC
Confidence 568899999999999999999999999888888885 8999999999999999999999999999999999999999999
Q ss_pred CcccCh-hHHHHHHHHhcCCcccHHHHHHHHHhcC-CCCcEEEEECCchHHHHHHHHHHhh
Q psy2373 224 ALPYSI-EKITNNLSNHLINPVKWFDSIYYLLNKS-KNEMEFMEIGPGTVLTKFIKSIKNE 282 (358)
Q Consensus 224 g~~~~~-~~~~~~~~~~~~~pv~f~~~v~~~~~~~-~g~~~~veiGP~~~l~~~~~~~l~~ 282 (358)
|+++.. ..+...+.+|+..||+|..+++++.+.- .|...++|+|||.++...+++....
T Consensus 302 g~~~~~~~hi~~~l~kQ~~rPV~we~~~~ti~sk~~~g~~~sye~GPG~~l~~ilk~~~~~ 362 (386)
T KOG2926|consen 302 GKPYRDPGHILKQLAKQIVRPVQWEQTLKTIYSKQGVGFPRSYEVGPGRVLVAILKRNNPQ 362 (386)
T ss_pred CcccCChHHHHHHHHHHhcCchhHHHHHHHHHhcCCCCCCceEeeCCcHHHHHHHHHhCch
Confidence 998865 6788999999999999999999998761 2557899999999999999887654
No 10
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-43 Score=375.98 Aligned_cols=316 Identities=30% Similarity=0.450 Sum_probs=277.3
Q ss_pred EEEEecCCCcchHHHHHHHHhhcHHHHHHHHHH-------hCCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHH
Q psy2373 2 KTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNI-------LGYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIK 74 (358)
Q Consensus 2 i~fvF~Gqg~~~~~~~~~L~~~~~~~~~~~~~~-------lg~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~ 74 (358)
++|+|+|||+||.+||++||+.+|.|...++.+ +++++.+.+..+....+.....+||.+|++| ++++++|+
T Consensus 527 ~vfvf~gqgsq~~~mg~el~~~~p~f~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~~Qp~lfai~-~ala~l~~ 605 (1061)
T COG3321 527 TVFVFPGQGSQWAGMGRELYALEPVFASAFDALEALLHRLLGFSLPEVIFAPDYPFLESIDFAQPALFAVS-VALAALWR 605 (1061)
T ss_pred eEEEeCchHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHcCCcccceecCCCCccccCcchhhhHHHHHH-HHHHHHHH
Confidence 689999999999999999999999887766554 4777766665544323667779999999999 89999999
Q ss_pred HhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhcCCC-CceEEEcCCCH-HHHHHHHHhcCCCceEEecc
Q psy2373 75 NTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQVLD-GAMAAVIGINY-KKILNILKENNLNTIDIANY 152 (358)
Q Consensus 75 ~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~~~~-g~m~aV~~~~~-~~~~~~l~~~~~~~v~ia~~ 152 (358)
++|++|+.++|||+||++|++++|++|++|+++++..|+++|..... |+|++| .++. +++.+++.... ..+.|+++
T Consensus 606 s~gv~p~~viGhS~gE~aaA~~aGv~s~~d~~~~v~~Rg~lm~~~~~~G~m~~v-~~~~~~~~~~~~~~~~-~~v~ia~~ 683 (1061)
T COG3321 606 SWGVIPGAVIGHSLGELAAAVAAGVLSLEDALRVVATRGRLMQQLAGEGAMLAV-ELSLLAEVQELLALGR-PQVPLAAV 683 (1061)
T ss_pred hcCCcCccccCcCHHHHHHHHHhccCChhhhhHhhhhcchhhccCCCCcchhhh-hcCccchhhHHhhccc-cceeEEEe
Confidence 99999999999999999999999999999999999999999999665 899999 6666 77777777543 57999999
Q ss_pred cCCCcEEEEcchhhHHHHHHHHHhCCcEEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCCCcccChhHH
Q psy2373 153 NTLNQIIIAGPKNDINNAQIFFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKI 232 (358)
Q Consensus 153 nsp~~~visG~~~~l~~l~~~l~~~g~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~~~~ 232 (358)
|+|.++||+|+++++.++...+.+.++.+++++++++|||+.|+++.+++.+.+.++..+.|.+|++|++++.+......
T Consensus 684 n~P~~~vi~g~~~~i~~l~~~~~~~~~~~~~~~v~~a~hs~~m~~~~~~~~~~la~i~~~~p~~p~~S~~~~~~~~~~~~ 763 (1061)
T COG3321 684 NSPQQVVIAGDPEAIAALIARLQAQGVRARRLAVSHAFHSPLMDPILDEFAAALADLAPRPPQIPLISNVTGDLAGEPGG 763 (1061)
T ss_pred cCCceEEecCCHHHHHHHHHHHhccCcccceeeeeeccccHHHHHHHHHHHHHHhhcccCCCCcceeeeeeccccCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998433222
Q ss_pred -HHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHhhccCCc------------cchhhHHHHhhh
Q psy2373 233 -TNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYKKDC------------VIKDDILEQSQE 299 (358)
Q Consensus 233 -~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~~~~~~~------------~~~~~~~~l~~~ 299 (358)
.+||.+++++||+|.++++.+.++ +.++|+|+||++.++..+++++... ... .....++.++..
T Consensus 764 d~~yw~~~~r~~v~f~~~i~~~~~~--~~~~f~E~~p~p~l~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~~~l~~~ 840 (1061)
T COG3321 764 DAQYWVQHLRQPVRFADAIAAALAD--GARTFIEVGPGPVLTESIKQTLRDA-ILSIATLRRDAPELLSFLAALAQLFVA 840 (1061)
T ss_pred CHHHHHHHHHhhccHHHHHHHHHhc--ccceEEEecCCHhHHHHHHHHhhhh-hcchhhhcccccchhHHHHHHHHHHhc
Confidence 689999999999999999999999 8999999999999999999998874 211 112223899999
Q ss_pred hhhccccccCCC--CccccccCCC-cc
Q psy2373 300 KKIEKWNNKYPI--GTKVKVKGYK-DI 323 (358)
Q Consensus 300 ~~~~~w~~~~~~--~~~~~lp~y~-~~ 323 (358)
|..+||..++.. ++.+.+|+|+ +|
T Consensus 841 g~~~dw~~~~~~~~~~~v~lp~~~~q~ 867 (1061)
T COG3321 841 GVAVDWSPLVYGPDGRLVELPTYPFQR 867 (1061)
T ss_pred CCCcCcHhhhcCCccccccCCCCCcee
Confidence 999999988755 3589999995 44
No 11
>KOG1202|consensus
Probab=100.00 E-value=5.4e-36 Score=300.18 Aligned_cols=300 Identities=19% Similarity=0.260 Sum_probs=255.9
Q ss_pred EEEEecCCCcchHHHHHHHHh--hcHHHHHHHHHHh---CCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHHHh
Q psy2373 2 KTYLFPGQGSQYVGMGQLLFD--KFPDIIEKSNNIL---GYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIKNT 76 (358)
Q Consensus 2 i~fvF~Gqg~~~~~~~~~L~~--~~~~~~~~~~~~l---g~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~~~ 76 (358)
|-|+++|.|+||+||+.+|.+ .|+.-+.++++.+ |.++.+++.+.+++..++..++...+.++| +|+.++|...
T Consensus 501 iwfiysGMGsQW~~Ma~~LMkl~~F~dsi~~~ae~l~~~gldv~~vL~~s~~~tfdn~l~sfvsitAiQ-iaLtDlLs~l 579 (2376)
T KOG1202|consen 501 IWFIYSGMGSQWAGMAKDLMKLERFRDSIQRSAEVLKPFGLDVIDVLTRSDESTFDNILNSFVSITAIQ-IALTDLLSCL 579 (2376)
T ss_pred eEEEEeCCcchhhHHHHHHhhhHHHHHHHHHHHhhhcccCcchhhhhcCCChHHHHHHHHHHHHHHHHH-HHHHHHHHhc
Confidence 679999999999999999964 5777777777775 788999998888888888999999999999 8999999999
Q ss_pred CCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHHHHhc--CCCCceEEEcCCCHHHHHHHHHhcCCCceEEecccC
Q psy2373 77 GEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSKLMSQ--VLDGAMAAVIGINYKKILNILKENNLNTIDIANYNT 154 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~~~~~--~~~g~m~aV~~~~~~~~~~~l~~~~~~~v~ia~~ns 154 (358)
||+||.++|||+||+.|+|+-|+++.|+++..+++||+.+-+ .+.|+|.|| +++.|++.+.+- ++++-+|.||
T Consensus 580 gi~PDGIvGHS~GElgc~YaDGclt~EqtvlaAYwRG~sild~~l~kGaMAAV-GLsWEq~~~~~P----~~~~paCHNs 654 (2376)
T KOG1202|consen 580 GIRPDGIVGHSLGELGCGYADGCLTQEQTVLAAYWRGQSILDTHLPKGAMAAV-GLSWEQCKSRCP----PDVVPACHNS 654 (2376)
T ss_pred CCCCCcccccccchhcccccccccCHHHHHHHHHHcCceeccccCCCcchhhh-cCCHHHHhccCC----CcccccccCC
Confidence 999999999999999999999999999999999999997654 467999999 999999887664 6899999999
Q ss_pred CCcEEEEcchhhHHHHHHHHHhCCcEEEEccC-CCCCccccchHHHHHHHHHhccCC--CCCCCccEEeCCCCc--ccCh
Q psy2373 155 LNQIIIAGPKNDINNAQIFFEKNNAIYIPLNV-SGPFHSRYMKPIYKKFNNFLLDFV--FHSPNIPVISNFEAL--PYSI 229 (358)
Q Consensus 155 p~~~visG~~~~l~~l~~~l~~~g~~~~~L~v-~~~fHs~~~~~~~~~~~~~l~~~~--~~~p~ip~~S~~~g~--~~~~ 229 (358)
.++|+|||+.+.+.+|++.|++.|++++.++. .+|||||+|+.+.+++++.+.++- .++...+++|+.-.+ |-++
T Consensus 655 ~D~~TiSGp~a~v~~~v~qL~~~gvFak~V~t~G~aFHS~~m~a~~p~l~~~l~k~i~epK~rsarWlSTSipEa~W~s~ 734 (2376)
T KOG1202|consen 655 KDNVTISGPQASVFAFVEQLRAEGVFAKEVRTGGYAFHSPYMEAAAPPLRQSLEKVIPEPKPRSARWLSTSIPEAQWHSS 734 (2376)
T ss_pred CCceEecCChHHHHHHHHHhhhcCeeeeEecCCCccccCHHHHhhChHHHHHHHHhcCCCCCcccchhhccCChhhhcCh
Confidence 99999999999999999999999999999976 569999999999999999998853 344567899988654 3333
Q ss_pred -hHH--HHHHHHhcCCcccHHHHHHHHHhcCCCCcEEEEECCchHHHHHHHHHHhhccCCcc-------------chhhH
Q psy2373 230 -EKI--TNNLSNHLINPVKWFDSIYYLLNKSKNEMEFMEIGPGTVLTKFIKSIKNEYKKDCV-------------IKDDI 293 (358)
Q Consensus 230 -~~~--~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~veiGP~~~l~~~~~~~l~~~~~~~~-------------~~~~~ 293 (358)
... ++|...|+++||.|.++++.+-+ +.+.|||-|+.-+...+++.++.. .+.+ -+..+
T Consensus 735 la~tsSA~Y~vnNl~SPVLF~eAlq~vP~----nAv~vEiAPH~LlqAiLkRsL~p~-~t~v~Lmkr~h~~NlEffL~~l 809 (2376)
T KOG1202|consen 735 LARTSSAEYHVNNLVSPVLFHEALQHVPE----NAVVVEIAPHGLLQAILKRSLKPS-CTNVSLMKRGHRNNLEFFLAGL 809 (2376)
T ss_pred hhhhcchhhhhhccccHHHHHHHHHhCcc----cceEEEecchHHHHHHHHhhcCCc-cceehhhcCcccccHHHHHHHH
Confidence 111 38999999999999999988864 479999999998888888777532 1111 12344
Q ss_pred HHHhhhhhhccccccCCCC
Q psy2373 294 LEQSQEKKIEKWNNKYPIG 312 (358)
Q Consensus 294 ~~l~~~~~~~~w~~~~~~~ 312 (358)
+.++.+|....-.+++|..
T Consensus 810 grly~aG~~~qi~~l~p~i 828 (2376)
T KOG1202|consen 810 GRLYAAGIQPQILALFPPI 828 (2376)
T ss_pred HHHHHccCCccceeccCCC
Confidence 9999999998888888644
No 12
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=93.06 E-value=0.57 Score=39.80 Aligned_cols=46 Identities=24% Similarity=0.327 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHH
Q psy2373 63 IVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109 (358)
Q Consensus 63 ~~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~ 109 (358)
+.+ ++..+.|.+.|++|+.+.|-|.|.+.|++.+.-.+.++...+.
T Consensus 11 ~~~-~Gvl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~~~~~~~~~ 56 (172)
T cd07198 11 IYH-VGVAKALRERGPLIDIIAGTSAGAIVAALLASGRDLEEALLLL 56 (172)
T ss_pred HHH-HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 345 6888999999999999999999999999999888888877765
No 13
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=91.13 E-value=0.7 Score=39.29 Aligned_cols=46 Identities=17% Similarity=0.150 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 64 VNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 64 ~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
.+ ++..+.|++.|+.|+.+.|-|.|.+.|+..+.-.+.++..+...
T Consensus 14 ~~-~Gvl~~L~~~~~~~d~i~GtSaGal~a~~~a~g~~~~~~~~~~~ 59 (175)
T cd07205 14 AH-IGVLKALEEAGIPIDIVSGTSAGAIVGALYAAGYSPEEIEERAK 59 (175)
T ss_pred HH-HHHHHHHHHcCCCeeEEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 35 67788899999999999999999999999987778887766554
No 14
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=90.70 E-value=0.81 Score=39.50 Aligned_cols=44 Identities=18% Similarity=0.156 Sum_probs=36.6
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
+++.+.|++.|+.|+.+.|-|.|-+.|+..+.-.+.++..++..
T Consensus 15 ~Gvl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~~~~~~~~~~~ 58 (194)
T cd07207 15 IGALKALEEAGILKKRVAGTSAGAITAALLALGYSAADIKDILK 58 (194)
T ss_pred HHHHHHHHHcCCCcceEEEECHHHHHHHHHHcCCCHHHHHHHHH
Confidence 57788899999999999999999999988887677776655543
No 15
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=90.56 E-value=0.74 Score=43.12 Aligned_cols=46 Identities=15% Similarity=0.100 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHH
Q psy2373 63 IVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109 (358)
Q Consensus 63 ~~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~ 109 (358)
+.+ ++..+.|.+.|+.|+++.|-|+|.+.|++.|.-.+.++--..+
T Consensus 24 ~~h-iGVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~~~~~~~~~ 69 (306)
T COG1752 24 AAH-IGVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMDEDELELAA 69 (306)
T ss_pred HHH-HHHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCChhHHHHHH
Confidence 345 7888999999999999999999999999998777766544333
No 16
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=90.21 E-value=0.98 Score=40.21 Aligned_cols=47 Identities=17% Similarity=0.113 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 63 IVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 63 ~~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
+.+ ++..+.|.+.|++|+.+.|-|.|.+.|+..+--.+.++..+...
T Consensus 13 ~~~-~GvL~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~~~~~~~~~~ 59 (221)
T cd07210 13 YAH-LGFLAALLEMGLEPSAISGTSAGALVGGLFASGISPDEMAELLL 59 (221)
T ss_pred HHH-HHHHHHHHHcCCCceEEEEeCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 445 68889999999999999999999999999987788877666543
No 17
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=89.37 E-value=1.1 Score=41.11 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=34.6
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHH
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLR 107 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~ 107 (358)
++..+.|++.|+.+|.+.|-|+|.+.++..+.-.+..+-..
T Consensus 26 iGVL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~~~~~~~~ 66 (269)
T cd07227 26 IGILQALEEAGIPIDAIGGTSIGSFVGGLYAREADLVPIFG 66 (269)
T ss_pred HHHHHHHHHcCCCccEEEEECHHHHHHHHHHcCCchHHHHH
Confidence 68889999999999999999999988887776677666443
No 18
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=89.24 E-value=1.1 Score=39.77 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCC
Q psy2373 63 IVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFS 101 (358)
Q Consensus 63 ~~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls 101 (358)
+.+ ++..+.|.+.|+.++.+.|-|.|.+.|+..+.-.+
T Consensus 11 ~~~-~Gvl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 11 AYQ-AGVLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHH-HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 445 68889999999999999999999999999887776
No 19
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=89.19 E-value=1.2 Score=41.78 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=35.2
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~ 109 (358)
+++.+.|++.|+.||.+.|-|+|.+.++..+.-.+.++.....
T Consensus 31 iGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~~~~~~~~~~ 73 (306)
T cd07225 31 IGVIKALEEAGIPVDMVGGTSIGAFIGALYAEERNISRMKQRA 73 (306)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCCHHHHHHHH
Confidence 6888999999999999999999998888777667765554443
No 20
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=88.41 E-value=1.4 Score=42.56 Aligned_cols=44 Identities=18% Similarity=0.158 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 66 ALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 66 ~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
.++..+.|.+.|+.|+.+.|-|.|.+.|+.+|. .+.+|..++..
T Consensus 98 h~Gv~kaL~e~gl~p~~i~GtS~Gaivaa~~a~-~~~~e~~~~l~ 141 (391)
T cd07229 98 HLGVVKALWLRGLLPRIITGTATGALIAALVGV-HTDEELLRFLD 141 (391)
T ss_pred HHHHHHHHHHcCCCCceEEEecHHHHHHHHHHc-CCHHHHHHHHh
Confidence 378889999999999999999999999999988 67788777765
No 21
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=87.90 E-value=1.5 Score=37.26 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHH
Q psy2373 63 IVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDG 105 (358)
Q Consensus 63 ~~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da 105 (358)
+.+ ++..+.|++.|+.|+.+.|-|.|.+.|+..+.-.+.++.
T Consensus 13 ~~~-~Gvl~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~~~~~ 54 (175)
T cd07228 13 WAH-IGVLRALEEEGIEIDIIAGSSIGALVGALYAAGHLDALE 54 (175)
T ss_pred HHH-HHHHHHHHHCCCCeeEEEEeCHHHHHHHHHHcCCCHHHH
Confidence 345 677888999999999999999999988888766665543
No 22
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=86.32 E-value=3.4 Score=37.05 Aligned_cols=50 Identities=24% Similarity=0.220 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhCCCc--CEEeecChHHHHHHHHhCCCCHHHHHHHHHHH
Q psy2373 62 YIVNALSYRDHIKNTGEYA--DFLVGHSLGEYNALESAGVFSFEDGLRLVQKR 112 (358)
Q Consensus 62 ~~~q~~a~~~~l~~~Gv~P--~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r 112 (358)
++.+ ++..+.|.+.|+.| +.+.|-|.|.+.|++.+...+.++..++....
T Consensus 11 g~yh-~GVl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~~~~~~~~~~~~ 62 (233)
T cd07224 11 FPYH-LGVLSLLIEAGVINETTPLAGASAGSLAAACSASGLSPEEALEATEEL 62 (233)
T ss_pred HHHH-HHHHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3444 68889999999984 58999999999999998878887777665543
No 23
>PRK10279 hypothetical protein; Provisional
Probab=86.13 E-value=1.2 Score=41.72 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHh-CC
Q psy2373 63 IVNALSYRDHIKNTGEYADFLVGHSLGEYNALESA-GV 99 (358)
Q Consensus 63 ~~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a-G~ 99 (358)
+.+ ++..+.|++.|+.|+.+.|-|+|.+.++..| |.
T Consensus 18 ~ah-iGVL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 18 WSH-IGVINALKKVGIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHH-HHHHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCC
Confidence 345 7888999999999999999999998776554 54
No 24
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=84.64 E-value=4.2 Score=36.83 Aligned_cols=46 Identities=13% Similarity=0.022 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhC--CCcCEEeecChHHHHHHHHhCCCCHHHHHHHH
Q psy2373 63 IVNALSYRDHIKNTG--EYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109 (358)
Q Consensus 63 ~~q~~a~~~~l~~~G--v~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~ 109 (358)
+.+ ++.++.|++.| +.++.+.|-|.|.++|++.+...+.++..+..
T Consensus 13 ~yh-~GVl~aL~e~g~~~~~d~i~GtSAGAl~aa~~a~g~~~~~~~~~~ 60 (245)
T cd07218 13 IYH-VGVAVCLKKYAPHLLLNKISGASAGALAACCLLCDLPLGEMTSDF 60 (245)
T ss_pred HHH-HHHHHHHHHhCcccCCCeEEEEcHHHHHHHHHHhCCcHHHHHHHH
Confidence 344 68889999999 45899999999999999998878877766443
No 25
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=82.70 E-value=5.7 Score=35.88 Aligned_cols=46 Identities=13% Similarity=0.137 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCCC--c--CEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 64 VNALSYRDHIKNTGEY--A--DFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 64 ~q~~a~~~~l~~~Gv~--P--~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
.+ ++.++.|.+.|+. + +.+.|-|.|.+.|++.+...+.++..+...
T Consensus 13 yh-~GVl~~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a~g~~~~~~~~~~~ 62 (243)
T cd07204 13 YH-VGVASALREHAPRLLQNARRIAGASAGAIVAAVVLCGVSMEEACSFIL 62 (243)
T ss_pred HH-HHHHHHHHHcCcccccCCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 34 6888999999987 3 599999999999999988888887655443
No 26
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=82.43 E-value=4.8 Score=37.78 Aligned_cols=42 Identities=12% Similarity=0.048 Sum_probs=36.5
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~ 109 (358)
++..+.|.+.|+.|+.+.|-|.|.+.|+..+. .+.+|..++.
T Consensus 84 ~GVlkaL~e~gl~p~~i~GsSaGAivaa~~~~-~t~~El~~~~ 125 (323)
T cd07231 84 VGVVRTLVEHQLLPRVIAGSSVGSIVCAIIAT-RTDEELQSFF 125 (323)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 68889999999999999999999999988876 5777776665
No 27
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=81.76 E-value=6.6 Score=35.66 Aligned_cols=44 Identities=14% Similarity=0.091 Sum_probs=36.0
Q ss_pred HHHHHHHHHhCCC----cCEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEY----ADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 67 ~a~~~~l~~~Gv~----P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
++.++.|.+.|+. ++.+.|-|.|.++|++.+-..+.++..+...
T Consensus 20 ~GVl~~L~e~g~~l~~~~~~i~G~SAGAl~aa~~a~g~~~~~~~~~~~ 67 (249)
T cd07220 20 VGVASCLLEHAPFLVANARKIYGASAGALTATALVTGVCLGECGASVI 67 (249)
T ss_pred HHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6888999999987 8999999999999998887777766544443
No 28
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=80.52 E-value=5.4 Score=39.00 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=36.3
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
++..+.|.+.|+.|+.+.|-|.|.+.|+..+. -+.++..++..
T Consensus 83 ~GVlkaL~e~gllp~iI~GtSAGAivaalla~-~t~~el~~~~~ 125 (407)
T cd07232 83 FGVVKALLDADLLPNVISGTSGGSLVAALLCT-RTDEELKQLLV 125 (407)
T ss_pred HHHHHHHHhCCCCCCEEEEECHHHHHHHHHHc-CCHHHHHHHHh
Confidence 68889999999999999999999999888876 56677666544
No 29
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=80.32 E-value=5.9 Score=38.93 Aligned_cols=42 Identities=14% Similarity=0.087 Sum_probs=35.1
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCCHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFSFEDGLRLV 109 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~ 109 (358)
++..+.|.+.|+.|+.+.|-|.|.+.|+..+. .+.++..++.
T Consensus 89 iGVLkaL~E~gl~p~vIsGTSaGAivAal~as-~~~eel~~~l 130 (421)
T cd07230 89 IGVLKALFEANLLPRIISGSSAGSIVAAILCT-HTDEEIPELL 130 (421)
T ss_pred HHHHHHHHHcCCCCCEEEEECHHHHHHHHHHc-CCHHHHHHHH
Confidence 68889999999999999999999999987765 5667655544
No 30
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=80.26 E-value=6.7 Score=35.64 Aligned_cols=45 Identities=11% Similarity=0.220 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCC----cCEEeecChHHHHHHHHhCCCCHHHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEY----ADFLVGHSLGEYNALESAGVFSFEDGLRLVQK 111 (358)
Q Consensus 67 ~a~~~~l~~~Gv~----P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~ 111 (358)
++.++.|.+.|+. ++.+.|-|.|.++|++.+-..+.++..+....
T Consensus 16 ~GVl~aL~e~~~~l~~~~~~i~GtSAGAl~aa~~asg~~~~~~~~~~~~ 64 (252)
T cd07221 16 VGVTRCLSERAPHLLRDARMFFGASAGALHCVTFLSGLPLDQILQILMD 64 (252)
T ss_pred HHHHHHHHHhCcchhccCCEEEEEcHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 6888999988986 89999999999999998877787777666543
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=79.88 E-value=2.1 Score=37.74 Aligned_cols=32 Identities=25% Similarity=0.201 Sum_probs=26.8
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHhCC
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESAGV 99 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ 99 (358)
-+.+++++.++++..++|||+|-..|+.++..
T Consensus 55 ~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~ 86 (242)
T PRK11126 55 LLSQTLQSYNILPYWLVGYSLGGRIAMYYACQ 86 (242)
T ss_pred HHHHHHHHcCCCCeEEEEECHHHHHHHHHHHh
Confidence 34567788899999999999999999988754
No 32
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=76.70 E-value=4.1 Score=37.15 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCCC-cCEEeecChHHHHHHHHh-CC
Q psy2373 67 LSYRDHIKNTGEY-ADFLVGHSLGEYNALESA-GV 99 (358)
Q Consensus 67 ~a~~~~l~~~Gv~-P~~v~GhS~GE~aAa~~a-G~ 99 (358)
++..+.|.+.|+. ++.+.|-|.|.+.|+..+ |.
T Consensus 14 ~Gvl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 14 AGVLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCC
Confidence 6788999999999 999999999998888764 54
No 33
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=74.89 E-value=10 Score=36.49 Aligned_cols=49 Identities=20% Similarity=0.208 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHhCC----CcCEEeecChHHHHHHHHhCCCCHHHHHHHHH
Q psy2373 61 LYIVNALSYRDHIKNTGE----YADFLVGHSLGEYNALESAGVFSFEDGLRLVQ 110 (358)
Q Consensus 61 l~~~q~~a~~~~l~~~Gv----~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~ 110 (358)
..+.+ +++++.|++.|+ .++.++|-|.|.++|++.+...+.++..++..
T Consensus 23 rGiYH-vGVl~aL~E~gp~ll~~~d~IaGtSAGALvAAl~asG~s~de~~r~~~ 75 (382)
T cd07219 23 LSFYQ-AGVVDALRDLAPRMLETAHRVAGTSAGSVIAALVVCGISMDEYLRVLN 75 (382)
T ss_pred HHHHH-HHHHHHHHhcCCcccccCCeEEEEcHHHHHHHHHHhCCCHHHHHHHHH
Confidence 34445 788899998884 37999999999999999987788888877764
No 34
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=74.32 E-value=11 Score=35.30 Aligned_cols=47 Identities=23% Similarity=0.219 Sum_probs=37.1
Q ss_pred HHHHHHHHH-hCCC----cCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy2373 67 LSYRDHIKN-TGEY----ADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRS 113 (358)
Q Consensus 67 ~a~~~~l~~-~Gv~----P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~ 113 (358)
+.+.+.|++ .|+. +|.+.|-|.|-+.|+..+--++.+|..++....+
T Consensus 15 i~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g~s~~e~~~~y~~~~ 66 (312)
T cd07212 15 IQMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHGKSLREARRLYLRMK 66 (312)
T ss_pred HHHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcCCCHHHHHHHHHHhh
Confidence 345566666 5875 7999999999999999988899999888765444
No 35
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=73.22 E-value=4.1 Score=37.00 Aligned_cols=29 Identities=17% Similarity=-0.056 Sum_probs=24.4
Q ss_pred HHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 70 RDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 70 ~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
.+.+...++++-.++|||+|-+.|+.+|.
T Consensus 82 ~~~i~~l~~~~~~LvG~S~GG~va~~~a~ 110 (276)
T TIGR02240 82 ARMLDYLDYGQVNAIGVSWGGALAQQFAH 110 (276)
T ss_pred HHHHHHhCcCceEEEEECHHHHHHHHHHH
Confidence 35567788999999999999999998773
No 36
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=73.21 E-value=3.7 Score=36.79 Aligned_cols=30 Identities=30% Similarity=0.280 Sum_probs=24.4
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.+.++++..++++..++|||+|-..|+.++
T Consensus 84 ~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a 113 (278)
T TIGR03056 84 DLSALCAAEGLSPDGVIGHSAGAAIALRLA 113 (278)
T ss_pred HHHHHHHHcCCCCceEEEECccHHHHHHHH
Confidence 344566778999999999999998888765
No 37
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=72.45 E-value=17 Score=32.90 Aligned_cols=33 Identities=18% Similarity=0.139 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCC----cCEEeecChHHHHHHHHhCC
Q psy2373 67 LSYRDHIKNTGEY----ADFLVGHSLGEYNALESAGV 99 (358)
Q Consensus 67 ~a~~~~l~~~Gv~----P~~v~GhS~GE~aAa~~aG~ 99 (358)
++..+.|.+.|++ ++.+.|-|.|.+.|++.+..
T Consensus 15 iGVl~~L~e~g~~l~~~~~~i~GtSaGAl~aa~~a~~ 51 (246)
T cd07222 15 LGAAKALLRHGKKLLKRVKRFAGASAGSLVAAVLLTA 51 (246)
T ss_pred HHHHHHHHHcCchhhccCCEEEEECHHHHHHHHHhcC
Confidence 6888999999985 89999999999999999843
No 38
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=72.10 E-value=4.5 Score=37.11 Aligned_cols=30 Identities=20% Similarity=0.298 Sum_probs=25.2
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.+.+++++.++++..++|||+|-..|+..+
T Consensus 91 ~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a 120 (294)
T PLN02824 91 QLNDFCSDVVGDPAFVICNSVGGVVGLQAA 120 (294)
T ss_pred HHHHHHHHhcCCCeEEEEeCHHHHHHHHHH
Confidence 455677788999999999999999988765
No 39
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=71.69 E-value=18 Score=35.00 Aligned_cols=50 Identities=16% Similarity=0.064 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHhCC----CcCEEeecChHHHHHHHHhCCCCHHHHHHHHHH
Q psy2373 61 LYIVNALSYRDHIKNTGE----YADFLVGHSLGEYNALESAGVFSFEDGLRLVQK 111 (358)
Q Consensus 61 l~~~q~~a~~~~l~~~Gv----~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~ 111 (358)
+.+.+ ++.++.|.+.|. .++.+.|-|.|.++|++.+...+.++..+.+..
T Consensus 20 lG~yH-vGV~~~L~e~~p~ll~~~~~iaGaSAGAL~aa~~a~g~~~~~~~~~i~~ 73 (405)
T cd07223 20 LGLYH-VGVTECLRQRAPRLLQGARRIYGSSSGALNAVSIVCGKSADFCCSNLLG 73 (405)
T ss_pred HHHHH-HHHHHHHHHhCchhhccCCeeeeeCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 44455 688888888873 357799999999999999999999966555543
No 40
>PRK13604 luxD acyl transferase; Provisional
Probab=71.46 E-value=5.6 Score=37.22 Aligned_cols=34 Identities=24% Similarity=0.162 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 65 NALSYRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 65 q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
.+.+..+++++.+..+-.++|||+|-.+|..+|.
T Consensus 94 Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~ 127 (307)
T PRK13604 94 SLLTVVDWLNTRGINNLGLIAASLSARIAYEVIN 127 (307)
T ss_pred HHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhc
Confidence 3456678888888888899999999999877654
No 41
>PRK03592 haloalkane dehalogenase; Provisional
Probab=70.15 E-value=5.3 Score=36.66 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=24.8
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+..+++++|+++..++|||+|-+.|+..+
T Consensus 83 l~~ll~~l~~~~~~lvGhS~Gg~ia~~~a 111 (295)
T PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWA 111 (295)
T ss_pred HHHHHHHhCCCCeEEEEECHHHHHHHHHH
Confidence 45667889999999999999999888765
No 42
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=69.79 E-value=9.4 Score=35.58 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
++.++.|.+.|+.|+.+.|-|.|.+.|+..+.
T Consensus 85 ~Gvl~aL~e~~l~~~~i~GtSaGAi~aa~~~~ 116 (298)
T cd07206 85 LGVVKALWEQDLLPRVISGSSAGAIVAALLGT 116 (298)
T ss_pred HHHHHHHHHcCCCCCEEEEEcHHHHHHHHHHc
Confidence 68889999999999999999999988887764
No 43
>PRK00870 haloalkane dehalogenase; Provisional
Probab=68.92 E-value=5.6 Score=36.68 Aligned_cols=29 Identities=21% Similarity=0.122 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.+++++.++++-.++|||+|-+.|...+
T Consensus 105 l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a 133 (302)
T PRK00870 105 MRSWFEQLDLTDVTLVCQDWGGLIGLRLA 133 (302)
T ss_pred HHHHHHHcCCCCEEEEEEChHHHHHHHHH
Confidence 44667788999999999999998888665
No 44
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=68.76 E-value=6.9 Score=33.15 Aligned_cols=30 Identities=33% Similarity=0.410 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.+.++++..+.++-.++|||+|-..++.++
T Consensus 55 ~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a 84 (228)
T PF12697_consen 55 DLAELLDALGIKKVILVGHSMGGMIALRLA 84 (228)
T ss_dssp HHHHHHHHTTTSSEEEEEETHHHHHHHHHH
T ss_pred hhhhcccccccccccccccccccccccccc
Confidence 455777889999999999999999888765
No 45
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=68.65 E-value=7.1 Score=35.82 Aligned_cols=30 Identities=27% Similarity=0.255 Sum_probs=25.1
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
...+.+++.|++|-.++|||+|-..|+.++
T Consensus 88 ~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A 117 (266)
T TIGR03101 88 AAYRWLIEQGHPPVTLWGLRLGALLALDAA 117 (266)
T ss_pred HHHHHHHhcCCCCEEEEEECHHHHHHHHHH
Confidence 455777888899999999999999888665
No 46
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=68.08 E-value=14 Score=34.14 Aligned_cols=47 Identities=23% Similarity=0.196 Sum_probs=36.7
Q ss_pred HHHHHHHHHhCCC----cCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHH
Q psy2373 67 LSYRDHIKNTGEY----ADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRS 113 (358)
Q Consensus 67 ~a~~~~l~~~Gv~----P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~ 113 (358)
+++.+.|++.+.+ +|.++|-|.|-+.|++.+--.+.++..++....+
T Consensus 18 ~~vL~~Le~~~~~~~~~fD~i~GTSaGaiia~~la~g~~~~e~~~~~~~~~ 68 (288)
T cd07213 18 LVLLKRLAEEFPSFLDQIDLFAGTSAGSLIALGLALGYSPRQVLKLYEEVG 68 (288)
T ss_pred HHHHHHHHHhCcccccceeEEEEeCHHHHHHHHHHcCcCHHHHHHHHHHhC
Confidence 4555667666654 7999999999999999987778888887766543
No 47
>PRK11071 esterase YqiA; Provisional
Probab=67.93 E-value=6.8 Score=33.79 Aligned_cols=29 Identities=31% Similarity=0.251 Sum_probs=24.5
Q ss_pred HHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 70 RDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 70 ~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
.+++++.+.++..++|||+|-+.|+..+.
T Consensus 52 ~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~ 80 (190)
T PRK11071 52 ESLVLEHGGDPLGLVGSSLGGYYATWLSQ 80 (190)
T ss_pred HHHHHHcCCCCeEEEEECHHHHHHHHHHH
Confidence 45667788999999999999999998764
No 48
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=67.77 E-value=11 Score=35.77 Aligned_cols=41 Identities=20% Similarity=0.117 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCC
Q psy2373 60 ALYIVNALSYRDHIKNTGEYADFLVGHSLGEYNALESAGVF 100 (358)
Q Consensus 60 ~l~~~q~~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~l 100 (358)
...+.++.++.+++++.|..|-++.|.|||-.-|+.++..+
T Consensus 156 ~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~ 196 (348)
T PF09752_consen 156 RATILESRALLHWLEREGYGPLGLTGISMGGHMAALAASNW 196 (348)
T ss_pred hHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhhcC
Confidence 34555667888999989999999999999988777665433
No 49
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=64.82 E-value=7.9 Score=36.62 Aligned_cols=30 Identities=23% Similarity=0.142 Sum_probs=24.4
Q ss_pred HHHHHHHHhCCCcC-EEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYAD-FLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~-~v~GhS~GE~aAa~~a 97 (358)
.+.+++++.|++.. .++|||+|-+.|+..+
T Consensus 126 dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A 156 (343)
T PRK08775 126 AIALLLDALGIARLHAFVGYSYGALVGLQFA 156 (343)
T ss_pred HHHHHHHHcCCCcceEEEEECHHHHHHHHHH
Confidence 44577788999765 7999999999998876
No 50
>PLN02965 Probable pheophorbidase
Probab=63.99 E-value=7.2 Score=34.96 Aligned_cols=29 Identities=24% Similarity=0.252 Sum_probs=23.2
Q ss_pred HHHHHHHhCC-CcCEEeecChHHHHHHHHh
Q psy2373 69 YRDHIKNTGE-YADFLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~~~Gv-~P~~v~GhS~GE~aAa~~a 97 (358)
+.++++..++ ++..++|||+|-..|..++
T Consensus 61 l~~~l~~l~~~~~~~lvGhSmGG~ia~~~a 90 (255)
T PLN02965 61 LFALLSDLPPDHKVILVGHSIGGGSVTEAL 90 (255)
T ss_pred HHHHHHhcCCCCCEEEEecCcchHHHHHHH
Confidence 4466677887 5999999999998887765
No 51
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=63.62 E-value=24 Score=33.72 Aligned_cols=38 Identities=32% Similarity=0.285 Sum_probs=32.2
Q ss_pred CCCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHHHHH
Q psy2373 77 GEYADFLVGHSLGEYNALESAGVFSFEDGLRLVQKRSK 114 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~r~~ 114 (358)
+...|.+.|-|.|-+.|+..+--+|.+|..++....+.
T Consensus 39 ~d~FDlIaGTStGgIIAa~la~g~s~~ei~~~y~~~~~ 76 (344)
T cd07217 39 GDYFDFVGGTSTGSIIAACIALGMSVTDLLSFYTLNGV 76 (344)
T ss_pred cccccEEEEecHHHHHHHHHHcCCCHHHHHHHHHhhhh
Confidence 44569999999999999999888999999988776654
No 52
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=62.90 E-value=8.7 Score=36.45 Aligned_cols=30 Identities=30% Similarity=0.319 Sum_probs=24.6
Q ss_pred HHHHHHHHhCCCc-CEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYA-DFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P-~~v~GhS~GE~aAa~~a 97 (358)
.+.++++++|+++ ..++|||+|-+.|+..+
T Consensus 115 ~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a 145 (351)
T TIGR01392 115 AQKLLLDHLGIEQIAAVVGGSMGGMQALEWA 145 (351)
T ss_pred HHHHHHHHcCCCCceEEEEECHHHHHHHHHH
Confidence 3446678899988 89999999998888765
No 53
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=62.38 E-value=18 Score=31.34 Aligned_cols=90 Identities=13% Similarity=0.147 Sum_probs=49.1
Q ss_pred CEEEEecCCCcchHHHHHHHHhhcHHHHHHHHHHhCCCHHHHhcccccccccCCchhHHHHHHHHHHHHHHHHHHhCCCc
Q psy2373 1 MKTYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNILGYSIKELCLKNSKNQLNKTEYTQPALYIVNALSYRDHIKNTGEYA 80 (358)
Q Consensus 1 ~i~fvF~Gqg~~~~~~~~~L~~~~~~~~~~~~~~lg~~l~~~~~~~~~~~~~~~~~~~~~l~~~q~~a~~~~l~~~Gv~P 80 (358)
+++++|+|.|. |.++.+++.+... ++=-.+.|+|....+..... . .|.+--+. -.+-.+.+.||.+-
T Consensus 3 t~~v~~SGDgG-w~~~d~~~a~~l~---~~G~~VvGvdsl~Yfw~~rt----P---~~~a~Dl~--~~i~~y~~~w~~~~ 69 (192)
T PF06057_consen 3 TLAVFFSGDGG-WRDLDKQIAEALA---KQGVPVVGVDSLRYFWSERT----P---EQTAADLA--RIIRHYRARWGRKR 69 (192)
T ss_pred EEEEEEeCCCC-chhhhHHHHHHHH---HCCCeEEEechHHHHhhhCC----H---HHHHHHHH--HHHHHHHHHhCCce
Confidence 36899999986 4455444433211 00011246666555443111 0 11111111 12335567899999
Q ss_pred CEEeecChHHHHHHHHhCCCCHH
Q psy2373 81 DFLVGHSLGEYNALESAGVFSFE 103 (358)
Q Consensus 81 ~~v~GhS~GE~aAa~~aG~ls~~ 103 (358)
-.++|||+|.=..-++...|+..
T Consensus 70 vvLiGYSFGADvlP~~~nrLp~~ 92 (192)
T PF06057_consen 70 VVLIGYSFGADVLPFIYNRLPAA 92 (192)
T ss_pred EEEEeecCCchhHHHHHhhCCHH
Confidence 99999999986655555555544
No 54
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=61.63 E-value=9.3 Score=36.50 Aligned_cols=28 Identities=18% Similarity=0.351 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHH
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALES 96 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~ 96 (358)
+.++++..++++..++|||+|-+.|+.+
T Consensus 145 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 172 (360)
T PLN02679 145 ILDFLEEVVQKPTVLIGNSVGSLACVIA 172 (360)
T ss_pred HHHHHHHhcCCCeEEEEECHHHHHHHHH
Confidence 4466778899999999999999887654
No 55
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=61.46 E-value=9.1 Score=34.55 Aligned_cols=30 Identities=27% Similarity=0.245 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
+.++++..++++-.++|||+|-+.|+..+.
T Consensus 91 l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~ 120 (282)
T TIGR03343 91 VKGLMDALDIEKAHLVGNSMGGATALNFAL 120 (282)
T ss_pred HHHHHHHcCCCCeeEEEECchHHHHHHHHH
Confidence 446677889999999999999999887763
No 56
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=61.34 E-value=16 Score=30.27 Aligned_cols=31 Identities=19% Similarity=0.224 Sum_probs=28.5
Q ss_pred HHHHHHHHHhCC--CcCEEeecChHHHHHHHHh
Q psy2373 67 LSYRDHIKNTGE--YADFLVGHSLGEYNALESA 97 (358)
Q Consensus 67 ~a~~~~l~~~Gv--~P~~v~GhS~GE~aAa~~a 97 (358)
++..+.|.+.|+ .++.+.|-|.|-+.|+..+
T Consensus 14 ~gvl~~l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 14 AGVLSALAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHHHHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 677888999999 9999999999999999988
No 57
>PRK10673 acyl-CoA esterase; Provisional
Probab=60.32 E-value=11 Score=33.40 Aligned_cols=28 Identities=18% Similarity=0.297 Sum_probs=22.7
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
..+...++++-.++|||+|-..|+.++.
T Consensus 73 ~~l~~l~~~~~~lvGhS~Gg~va~~~a~ 100 (255)
T PRK10673 73 DTLDALQIEKATFIGHSMGGKAVMALTA 100 (255)
T ss_pred HHHHHcCCCceEEEEECHHHHHHHHHHH
Confidence 4456678888899999999999887763
No 58
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=58.90 E-value=11 Score=33.55 Aligned_cols=29 Identities=31% Similarity=0.273 Sum_probs=23.8
Q ss_pred HHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 70 RDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 70 ~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
..+++..++++-.++|||+|-+.|+.++.
T Consensus 87 ~~~~~~~~~~~~~liG~S~Gg~ia~~~a~ 115 (288)
T TIGR01250 87 EEVREKLGLDKFYLLGHSWGGMLAQEYAL 115 (288)
T ss_pred HHHHHHcCCCcEEEEEeehHHHHHHHHHH
Confidence 34566788888999999999999888764
No 59
>PRK10349 carboxylesterase BioH; Provisional
Probab=58.68 E-value=12 Score=33.36 Aligned_cols=27 Identities=22% Similarity=0.254 Sum_probs=21.9
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.+.+.++++-.++|||+|-..|...+
T Consensus 66 ~~l~~~~~~~~~lvGhS~Gg~ia~~~a 92 (256)
T PRK10349 66 EAVLQQAPDKAIWLGWSLGGLVASQIA 92 (256)
T ss_pred HHHHhcCCCCeEEEEECHHHHHHHHHH
Confidence 344567888889999999999998775
No 60
>KOG2872|consensus
Probab=58.38 E-value=86 Score=29.06 Aligned_cols=169 Identities=18% Similarity=0.212 Sum_probs=77.0
Q ss_pred EEEecCCCcchHHHHHHHHhhcHHHHHHHHHHh--------------CCCHHHHhccccccccc---CCchhHHHHHHHH
Q psy2373 3 TYLFPGQGSQYVGMGQLLFDKFPDIIEKSNNIL--------------GYSIKELCLKNSKNQLN---KTEYTQPALYIVN 65 (358)
Q Consensus 3 ~fvF~Gqg~~~~~~~~~L~~~~~~~~~~~~~~l--------------g~~l~~~~~~~~~~~~~---~~~~~~~~l~~~q 65 (358)
.++.-|.|+..-.-.+.+...+|+....+-+++ |-...+++..- ...+. -..++-|-+--+-
T Consensus 159 ~YmiEGGgSkt~~~aK~w~~~~Pe~sh~lL~~lTda~v~Yl~~Qv~aGAq~lQiFeSw-ageLspe~f~e~s~PYl~~I~ 237 (359)
T KOG2872|consen 159 TYMIEGGGSKTFTQAKRWLFQYPEVSHALLQILTDAIVEYLVYQVVAGAQALQIFESW-AGELSPEDFEEFSLPYLRQIA 237 (359)
T ss_pred eeeecCCCchhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh-cccCCHHHHHHhhhHHHHHHH
Confidence 456677777766666666666775544433221 33333333211 11122 2333444333222
Q ss_pred HHHHHHHHHHhCCCcC---EEeecChHHHHHHHHhCC--C------CHHHHHHHHHHHHHHHhcCCCCceEEEcCCCHHH
Q psy2373 66 ALSYRDHIKNTGEYAD---FLVGHSLGEYNALESAGV--F------SFEDGLRLVQKRSKLMSQVLDGAMAAVIGINYKK 134 (358)
Q Consensus 66 ~~a~~~~l~~~Gv~P~---~v~GhS~GE~aAa~~aG~--l------s~~da~~l~~~r~~~~~~~~~g~m~aV~~~~~~~ 134 (358)
-++-+.+.+.++.|. .++--|-|.+--+|.+|. + +..||.++.-.+-.+..+..++.|+.-...-.+.
T Consensus 238 -~~Vk~rl~~~~~~~vPmi~fakG~g~~Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~ 316 (359)
T KOG2872|consen 238 -EAVKKRLPELGLAPVPMILFAKGSGGALEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQL 316 (359)
T ss_pred -HHHHHhhhhhcCCCCceEEEEcCcchHHHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHH
Confidence 355577777877653 333445556666677663 2 3334444443332222222333344332222334
Q ss_pred HHHHHHhcCCCceEEecccCCCcEEEEcchhhHHHHHHHHHh
Q psy2373 135 ILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176 (358)
Q Consensus 135 ~~~~l~~~~~~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~ 176 (358)
+++.+..++ +.-||++. -.-++..-+++.+..|.+.+.+
T Consensus 317 v~~mv~~fG-~~ryI~NL--GHGi~p~tp~e~v~~f~E~~h~ 355 (359)
T KOG2872|consen 317 VKQMVKDFG-KSRYIANL--GHGITPGTPPEHVAHFVEAVHK 355 (359)
T ss_pred HHHHHHHhC-ccceEEec--CCCCCCCCCHHHHHHHHHHHHH
Confidence 444444444 33444443 1123334455555555555543
No 61
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=58.29 E-value=38 Score=31.55 Aligned_cols=48 Identities=25% Similarity=0.298 Sum_probs=35.3
Q ss_pred HHHHHHHHHh-CCC----cCEEeecChHHHHHHHHh-CCCCHHHHHHHHHHHHH
Q psy2373 67 LSYRDHIKNT-GEY----ADFLVGHSLGEYNALESA-GVFSFEDGLRLVQKRSK 114 (358)
Q Consensus 67 ~a~~~~l~~~-Gv~----P~~v~GhS~GE~aAa~~a-G~ls~~da~~l~~~r~~ 114 (358)
+.+.+.|++. |.. +|.+.|-|.|-+.|+..+ +-++.+|..++....+.
T Consensus 24 ~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~~~~~~~e~~~~y~~~~~ 77 (308)
T cd07211 24 LEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGLKKMSLDECEELYRKLGK 77 (308)
T ss_pred HHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhcccccHHHHHHHHHHHHH
Confidence 4455556554 432 599999999999999886 46899998888765543
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=58.20 E-value=14 Score=31.76 Aligned_cols=29 Identities=38% Similarity=0.323 Sum_probs=23.6
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+..+++..|++.-.++|||+|-..++..+
T Consensus 34 ~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a 62 (230)
T PF00561_consen 34 LEALREALGIKKINLVGHSMGGMLALEYA 62 (230)
T ss_dssp HHHHHHHHTTSSEEEEEETHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeEEEEECCChHHHHHHH
Confidence 34566789999999999999998887764
No 63
>PRK07581 hypothetical protein; Validated
Probab=56.97 E-value=11 Score=35.56 Aligned_cols=26 Identities=23% Similarity=0.275 Sum_probs=21.5
Q ss_pred HHHHhCCCc-CEEeecChHHHHHHHHh
Q psy2373 72 HIKNTGEYA-DFLVGHSLGEYNALESA 97 (358)
Q Consensus 72 ~l~~~Gv~P-~~v~GhS~GE~aAa~~a 97 (358)
+++++|+++ ..++|||+|-+.|+..|
T Consensus 116 l~~~lgi~~~~~lvG~S~GG~va~~~a 142 (339)
T PRK07581 116 LTEKFGIERLALVVGWSMGAQQTYHWA 142 (339)
T ss_pred HHHHhCCCceEEEEEeCHHHHHHHHHH
Confidence 335699998 57899999999998775
No 64
>PLN02578 hydrolase
Probab=56.82 E-value=13 Score=35.46 Aligned_cols=30 Identities=37% Similarity=0.505 Sum_probs=24.0
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
+.+.+++.+.+|..++|||+|-+.|+.+|.
T Consensus 142 l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~ 171 (354)
T PLN02578 142 VADFVKEVVKEPAVLVGNSLGGFTALSTAV 171 (354)
T ss_pred HHHHHHHhccCCeEEEEECHHHHHHHHHHH
Confidence 345667778899999999999998887753
No 65
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=56.75 E-value=12 Score=32.36 Aligned_cols=31 Identities=23% Similarity=0.140 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHhCC
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESAGV 99 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ 99 (358)
+.+.++..+.++-.++|||+|-+.|+.++..
T Consensus 69 ~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 69 VLALLDHLGIERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred HHHHHHHhCCCceEEEEeCchHHHHHHHHHH
Confidence 3455667788888999999999988877653
No 66
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=56.42 E-value=13 Score=32.40 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
+.+.++..+.++-.++|||+|-..|..++.
T Consensus 70 ~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~ 99 (257)
T TIGR03611 70 VLQLLDALNIERFHFVGHALGGLIGLQLAL 99 (257)
T ss_pred HHHHHHHhCCCcEEEEEechhHHHHHHHHH
Confidence 345566778888899999999998888764
No 67
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=55.28 E-value=41 Score=29.88 Aligned_cols=21 Identities=33% Similarity=0.385 Sum_probs=16.9
Q ss_pred CCCcCEEeecChHHHHHHHHh
Q psy2373 77 GEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.++-.++|||||-+.|-.+.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSAL 103 (225)
T ss_pred CCCceEEEEEchhhHHHHHHH
Confidence 457789999999998887653
No 68
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=55.09 E-value=15 Score=35.40 Aligned_cols=31 Identities=29% Similarity=0.214 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCCcC-EEeecChHHHHHHHHhC
Q psy2373 68 SYRDHIKNTGEYAD-FLVGHSLGEYNALESAG 98 (358)
Q Consensus 68 a~~~~l~~~Gv~P~-~v~GhS~GE~aAa~~aG 98 (358)
.+.++++++|+++. .++|||+|-+.|..++.
T Consensus 135 ~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~ 166 (379)
T PRK00175 135 AQARLLDALGITRLAAVVGGSMGGMQALEWAI 166 (379)
T ss_pred HHHHHHHHhCCCCceEEEEECHHHHHHHHHHH
Confidence 34567788999885 89999999988887653
No 69
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=54.63 E-value=16 Score=35.56 Aligned_cols=30 Identities=30% Similarity=0.292 Sum_probs=24.1
Q ss_pred HHHHHHHHhCCCcC-EEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYAD-FLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~-~v~GhS~GE~aAa~~a 97 (358)
.+.++++++|++.- +++|||+|-+.|+..+
T Consensus 149 ~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a 179 (389)
T PRK06765 149 VQKELIKSLGIARLHAVMGPSMGGMQAQEWA 179 (389)
T ss_pred HHHHHHHHcCCCCceEEEEECHHHHHHHHHH
Confidence 44577788999875 5999999998888765
No 70
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=54.07 E-value=15 Score=35.68 Aligned_cols=28 Identities=32% Similarity=0.379 Sum_probs=23.2
Q ss_pred HHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 70 RDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 70 ~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.++++..++++-.++|||+|-+.|+.++
T Consensus 167 ~~~~~~l~~~~~~lvGhS~GG~la~~~a 194 (402)
T PLN02894 167 EEWRKAKNLSNFILLGHSFGGYVAAKYA 194 (402)
T ss_pred HHHHHHcCCCCeEEEEECHHHHHHHHHH
Confidence 3555678899999999999999988765
No 71
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=52.41 E-value=16 Score=31.37 Aligned_cols=29 Identities=34% Similarity=0.244 Sum_probs=22.7
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHhCC
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESAGV 99 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ 99 (358)
..++..+.++-.++|||+|-..|+.++..
T Consensus 62 ~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~ 90 (251)
T TIGR03695 62 TLLDQLGIEPFFLVGYSMGGRIALYYALQ 90 (251)
T ss_pred HHHHHcCCCeEEEEEeccHHHHHHHHHHh
Confidence 34456788899999999999888877643
No 72
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=51.43 E-value=16 Score=31.09 Aligned_cols=20 Identities=15% Similarity=0.308 Sum_probs=16.6
Q ss_pred HHHHHHHhCCCcCEEeecCh
Q psy2373 69 YRDHIKNTGEYADFLVGHSL 88 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~ 88 (358)
.+..|++.|..||.|+|||.
T Consensus 56 a~~~L~~~Gf~PDvI~~H~G 75 (171)
T PF12000_consen 56 AARQLRAQGFVPDVIIAHPG 75 (171)
T ss_pred HHHHHHHcCCCCCEEEEcCC
Confidence 34667888999999999983
No 73
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=50.46 E-value=18 Score=30.92 Aligned_cols=30 Identities=33% Similarity=0.339 Sum_probs=23.3
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.+..+++..|..+..++|||+|...+..++
T Consensus 77 ~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~ 106 (282)
T COG0596 77 DLAALLDALGLEKVVLVGHSMGGAVALALA 106 (282)
T ss_pred HHHHHHHHhCCCceEEEEecccHHHHHHHH
Confidence 344666789988899999999977776654
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=49.22 E-value=22 Score=31.04 Aligned_cols=30 Identities=30% Similarity=0.376 Sum_probs=22.4
Q ss_pred HHHHHHHHhCCC-cCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEY-ADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~-P~~v~GhS~GE~aAa~~a 97 (358)
.+++.++...-+ |-.++|||+|-+.|..+|
T Consensus 54 ~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A 84 (229)
T PF00975_consen 54 RYAEAIRARQPEGPYVLAGWSFGGILAFEMA 84 (229)
T ss_dssp HHHHHHHHHTSSSSEEEEEETHHHHHHHHHH
T ss_pred HHHHHhhhhCCCCCeeehccCccHHHHHHHH
Confidence 345566655544 999999999999888764
No 75
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=48.17 E-value=21 Score=33.71 Aligned_cols=29 Identities=34% Similarity=0.366 Sum_probs=23.9
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.++++..+..+-.++|||+|-+.|..++
T Consensus 187 ~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a 215 (371)
T PRK14875 187 VLAFLDALGIERAHLVGHSMGGAVALRLA 215 (371)
T ss_pred HHHHHHhcCCccEEEEeechHHHHHHHHH
Confidence 44666788888889999999999888665
No 76
>PF03958 Secretin_N: Bacterial type II/III secretion system short domain; InterPro: IPR005644 This is a group of NolW-like proteins, which are closely related to bacterial type II and III secretion system protein (IPR004846 from INTERPRO).; PDB: 3EZJ_C 2Y3M_A 3OSS_D.
Probab=47.68 E-value=42 Score=24.14 Aligned_cols=32 Identities=16% Similarity=0.325 Sum_probs=27.2
Q ss_pred CceEEecccCCCcEEEEcchhhHHHHHHHHHh
Q psy2373 145 NTIDIANYNTLNQIIIAGPKNDINNAQIFFEK 176 (358)
Q Consensus 145 ~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~ 176 (358)
..+.|......++.+|.|+++.++.+.+.+++
T Consensus 44 ~~~~i~~d~~tNsliv~g~~~~~~~i~~li~~ 75 (82)
T PF03958_consen 44 SSGRIVADERTNSLIVRGTPEDLEQIRELIKQ 75 (82)
T ss_dssp TTTEEEEECTTTEEEEEEEHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCEEEEEeCHHHHHHHHHHHHH
Confidence 46788888888999999999999988877764
No 77
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=47.11 E-value=22 Score=32.43 Aligned_cols=29 Identities=24% Similarity=0.318 Sum_probs=22.3
Q ss_pred HHHHHHHhC-CCcCEEeecChHHHHHHHHh
Q psy2373 69 YRDHIKNTG-EYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~~~G-v~P~~v~GhS~GE~aAa~~a 97 (358)
+.+.+++.+ .++-.++|||+|-+.+..++
T Consensus 76 l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a 105 (273)
T PLN02211 76 LIDFLSSLPENEKVILVGHSAGGLSVTQAI 105 (273)
T ss_pred HHHHHHhcCCCCCEEEEEECchHHHHHHHH
Confidence 445566664 57889999999999887765
No 78
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=45.74 E-value=27 Score=29.92 Aligned_cols=27 Identities=30% Similarity=0.341 Sum_probs=19.9
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.+.+...++..++|||+|-+.|+.++
T Consensus 57 ~~~~~~~~~~~~lvG~S~Gg~~a~~~a 83 (245)
T TIGR01738 57 EAIAAQAPDPAIWLGWSLGGLVALHIA 83 (245)
T ss_pred HHHHHhCCCCeEEEEEcHHHHHHHHHH
Confidence 333344447889999999999887765
No 79
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=45.65 E-value=23 Score=34.97 Aligned_cols=27 Identities=19% Similarity=0.133 Sum_probs=22.4
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.++..|.+|..++|||||-+.+.+.+
T Consensus 154 ~~~~~~g~~kV~LVGHSMGGlva~~fl 180 (440)
T PLN02733 154 TVYKASGGKKVNIISHSMGGLLVKCFM 180 (440)
T ss_pred HHHHHcCCCCEEEEEECHhHHHHHHHH
Confidence 444578899999999999999988765
No 80
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=45.63 E-value=30 Score=31.57 Aligned_cols=31 Identities=16% Similarity=-0.067 Sum_probs=22.1
Q ss_pred HHHHHHHHHh--CCCcCEEeecChHHHHHHHHh
Q psy2373 67 LSYRDHIKNT--GEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 67 ~a~~~~l~~~--Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.+.++.+++. |++.-.++|||+|-+.++..+
T Consensus 86 ~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 86 AAAIDAFREAAPHLRRIVAWGLCDAASAALLYA 118 (274)
T ss_pred HHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHh
Confidence 3445556543 676678999999998887653
No 81
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=45.56 E-value=61 Score=31.58 Aligned_cols=18 Identities=28% Similarity=0.409 Sum_probs=15.9
Q ss_pred HHhCCCcCEEeecChHHH
Q psy2373 74 KNTGEYADFLVGHSLGEY 91 (358)
Q Consensus 74 ~~~Gv~P~~v~GhS~GE~ 91 (358)
+.||.++..++|||+|.=
T Consensus 321 ~~w~~~~~~liGySfGAD 338 (456)
T COG3946 321 RRWGAKRVLLIGYSFGAD 338 (456)
T ss_pred HhhCcceEEEEeecccch
Confidence 469999999999999963
No 82
>PRK06489 hypothetical protein; Provisional
Probab=43.35 E-value=27 Score=33.25 Aligned_cols=24 Identities=21% Similarity=0.275 Sum_probs=20.1
Q ss_pred HHhCCCcC-EEeecChHHHHHHHHh
Q psy2373 74 KNTGEYAD-FLVGHSLGEYNALESA 97 (358)
Q Consensus 74 ~~~Gv~P~-~v~GhS~GE~aAa~~a 97 (358)
...|+++. .++|||+|-+.|+..+
T Consensus 148 ~~lgi~~~~~lvG~SmGG~vAl~~A 172 (360)
T PRK06489 148 EGLGVKHLRLILGTSMGGMHAWMWG 172 (360)
T ss_pred HhcCCCceeEEEEECHHHHHHHHHH
Confidence 56898876 4899999999998875
No 83
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=42.65 E-value=29 Score=32.02 Aligned_cols=28 Identities=25% Similarity=0.140 Sum_probs=22.7
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
.+++.+++++-.++|||+|-+.++.++.
T Consensus 87 ~l~~~l~~~~~~lvG~S~GG~ia~~~a~ 114 (306)
T TIGR01249 87 KLREKLGIKNWLVFGGSWGSTLALAYAQ 114 (306)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHHH
Confidence 4456778888899999999988887754
No 84
>PRK03204 haloalkane dehalogenase; Provisional
Probab=42.58 E-value=28 Score=31.88 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=22.7
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.++++.+|+++-.++|||+|-..|...+
T Consensus 91 ~~~~~~~~~~~~~~lvG~S~Gg~va~~~a 119 (286)
T PRK03204 91 IGEFVDHLGLDRYLSMGQDWGGPISMAVA 119 (286)
T ss_pred HHHHHHHhCCCCEEEEEECccHHHHHHHH
Confidence 34556778999999999999988776543
No 85
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=42.04 E-value=27 Score=29.04 Aligned_cols=31 Identities=29% Similarity=0.304 Sum_probs=24.0
Q ss_pred HHHHHHH-HHhCCCcCEEeecChHHHHHHHHh
Q psy2373 67 LSYRDHI-KNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 67 ~a~~~~l-~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+++.+.| ...+..++.+.|-|.|-+.|++.+
T Consensus 14 ~G~l~~L~~~~~~~~d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 14 AGVLKALGQGLGERFDVISGTSAGALNAALLA 45 (204)
T ss_dssp HHHHHHHCCTGCCT-SEEEEECCHHHHHHHHH
T ss_pred HHHHHHHhhhhCCCccEEEEcChhhhhHHHHH
Confidence 3455566 677889999999999999997665
No 86
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=41.48 E-value=1.2e+02 Score=27.36 Aligned_cols=34 Identities=29% Similarity=0.277 Sum_probs=28.6
Q ss_pred cCEEeecChHHHHHHHHhCC-CCHHHHHHHHHHHH
Q psy2373 80 ADFLVGHSLGEYNALESAGV-FSFEDGLRLVQKRS 113 (358)
Q Consensus 80 P~~v~GhS~GE~aAa~~aG~-ls~~da~~l~~~r~ 113 (358)
.|.++|-|.|-+.|+..+.. ++.++..++....+
T Consensus 35 fd~i~GtS~G~iia~~l~~~~~~~~~~~~~~~~~~ 69 (258)
T cd07199 35 FDLIAGTSTGGIIALGLALGRYSAEELVELYEELG 69 (258)
T ss_pred cceeeeccHHHHHHHHHhcCCCCHHHHHHHHHHHh
Confidence 79999999999999888766 89999888776544
No 87
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=41.28 E-value=42 Score=30.80 Aligned_cols=31 Identities=32% Similarity=0.366 Sum_probs=21.5
Q ss_pred HHHHHHHH-hCC--CcCEEeecChHHHHHHHHhC
Q psy2373 68 SYRDHIKN-TGE--YADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 68 a~~~~l~~-~Gv--~P~~v~GhS~GE~aAa~~aG 98 (358)
.+.+.|.+ .|+ +.-.++|||+|-..|..++.
T Consensus 98 ~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~ 131 (275)
T cd00707 98 KFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGK 131 (275)
T ss_pred HHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHH
Confidence 34444443 344 55789999999999988754
No 88
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=40.89 E-value=87 Score=29.20 Aligned_cols=37 Identities=16% Similarity=0.224 Sum_probs=30.7
Q ss_pred cCEEeecChHHHHHHHHhC-CCCHHHHHHHHHHHHHHH
Q psy2373 80 ADFLVGHSLGEYNALESAG-VFSFEDGLRLVQKRSKLM 116 (358)
Q Consensus 80 P~~v~GhS~GE~aAa~~aG-~ls~~da~~l~~~r~~~~ 116 (358)
.|.++|-|.|-+.|+..+. -++.+|.+.+-...+.-+
T Consensus 43 fDli~GTStGgiiA~~l~~~~~t~~e~~~~y~~~~~~i 80 (309)
T cd07216 43 FDLIGGTSTGGLIAIMLGRLRMTVDECIDAYTRLAKKI 80 (309)
T ss_pred cCeeeeccHHHHHHHHhcccCCCHHHHHHHHHHHhHHh
Confidence 4899999999999998874 689999998877666543
No 89
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=40.24 E-value=29 Score=34.78 Aligned_cols=27 Identities=30% Similarity=0.221 Sum_probs=23.0
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.+++..|+++..++|||+|-+.|+.++
T Consensus 266 ~ll~~lg~~k~~LVGhSmGG~iAl~~A 292 (481)
T PLN03087 266 SVLERYKVKSFHIVAHSLGCILALALA 292 (481)
T ss_pred HHHHHcCCCCEEEEEECHHHHHHHHHH
Confidence 356778999999999999999888765
No 90
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=39.30 E-value=58 Score=34.45 Aligned_cols=24 Identities=25% Similarity=0.182 Sum_probs=21.4
Q ss_pred HhCCCcCEEeecChHHHHHHHHhC
Q psy2373 75 NTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 75 ~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
+.++.++.+.|.|.|-+.|++.|.
T Consensus 62 ~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 62 RLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred ccCCCCceEEeeCHHHHHHHHHHc
Confidence 457999999999999999888886
No 91
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=38.48 E-value=44 Score=26.53 Aligned_cols=23 Identities=35% Similarity=0.413 Sum_probs=15.1
Q ss_pred HhCCCcCEEeecChHHHHHHHHh
Q psy2373 75 NTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 75 ~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
..+-..-.+.|||+|--.|..++
T Consensus 60 ~~~~~~i~itGHSLGGalA~l~a 82 (140)
T PF01764_consen 60 KYPDYSIVITGHSLGGALASLAA 82 (140)
T ss_dssp HSTTSEEEEEEETHHHHHHHHHH
T ss_pred cccCccchhhccchHHHHHHHHH
Confidence 33433356789999987666653
No 92
>PRK10749 lysophospholipase L2; Provisional
Probab=36.84 E-value=41 Score=31.56 Aligned_cols=23 Identities=13% Similarity=0.001 Sum_probs=18.6
Q ss_pred HhCCCcCEEeecChHHHHHHHHh
Q psy2373 75 NTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 75 ~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
..+..|-.++|||+|-..|+..+
T Consensus 127 ~~~~~~~~l~GhSmGG~ia~~~a 149 (330)
T PRK10749 127 PGPYRKRYALAHSMGGAILTLFL 149 (330)
T ss_pred cCCCCCeEEEEEcHHHHHHHHHH
Confidence 34778999999999998887543
No 93
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=35.33 E-value=68 Score=31.78 Aligned_cols=30 Identities=20% Similarity=0.144 Sum_probs=21.6
Q ss_pred HHHHHHH-HhC--CCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIK-NTG--EYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~-~~G--v~P~~v~GhS~GE~aAa~~a 97 (358)
.+.+.|. ..| ++...++|||+|--.|..++
T Consensus 105 ~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag 137 (442)
T TIGR03230 105 KFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAG 137 (442)
T ss_pred HHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHH
Confidence 3445443 344 57789999999999988865
No 94
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=34.99 E-value=1.8e+02 Score=29.17 Aligned_cols=44 Identities=27% Similarity=0.419 Sum_probs=32.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHhCCCcC--EEeecChHHHHHHHHhCCCCHH
Q psy2373 55 EYTQPALYIVNALSYRDHIKNTGEYAD--FLVGHSLGEYNALESAGVFSFE 103 (358)
Q Consensus 55 ~~~~~~l~~~q~~a~~~~l~~~Gv~P~--~v~GhS~GE~aAa~~aG~ls~~ 103 (358)
.+.+-.+-++| +.|..+|.+.+ .+-|.|||-+.|++.+.-+++.
T Consensus 336 eyE~~I~~~I~-----~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P~ 381 (511)
T TIGR03712 336 EYEQGIINVIQ-----EKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSPH 381 (511)
T ss_pred HHHHHHHHHHH-----HHHHHhCCCHHHeeeccccccchhhhhhcccCCCc
Confidence 34444444444 67788999875 5569999999999998877764
No 95
>PF03190 Thioredox_DsbH: Protein of unknown function, DUF255; InterPro: IPR004879 This is a group of uncharacterised proteins.; PDB: 3IRA_A.
Probab=34.77 E-value=45 Score=28.17 Aligned_cols=35 Identities=29% Similarity=0.494 Sum_probs=25.4
Q ss_pred HHHHHHhcCCcccHH----HHHHHHHhcCCCCcEEEEECCc
Q psy2373 233 TNNLSNHLINPVKWF----DSIYYLLNKSKNEMEFMEIGPG 269 (358)
Q Consensus 233 ~~~~~~~~~~pv~f~----~~v~~~~~~~~g~~~~veiGP~ 269 (358)
+-|+.++..+||+|. ++++.+.+. +.-+||.||-.
T Consensus 9 Spyl~~ha~~~V~W~~w~~ea~~~Ak~e--~KpIfl~ig~~ 47 (163)
T PF03190_consen 9 SPYLRQHAHNPVNWQPWGEEALEKAKKE--NKPIFLSIGYS 47 (163)
T ss_dssp -HHHHTTTTSSS--B-SSHHHHHHHHHH--T--EEEEEE-T
T ss_pred CHHHHHhccCCCCcccCCHHHHHHHHhc--CCcEEEEEEec
Confidence 469999999999994 788888888 88999999944
No 96
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=34.59 E-value=27 Score=30.94 Aligned_cols=29 Identities=38% Similarity=0.450 Sum_probs=22.3
Q ss_pred HHHHHH-HhCCCcC--EEeecChHHHHHHHHh
Q psy2373 69 YRDHIK-NTGEYAD--FLVGHSLGEYNALESA 97 (358)
Q Consensus 69 ~~~~l~-~~Gv~P~--~v~GhS~GE~aAa~~a 97 (358)
+...++ .+.+.++ +++|+|+|-+.|+.++
T Consensus 102 l~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~ 133 (251)
T PF00756_consen 102 LIPYIEANYRTDPDRRAIAGHSMGGYGALYLA 133 (251)
T ss_dssp HHHHHHHHSSEEECCEEEEEETHHHHHHHHHH
T ss_pred chhHHHHhcccccceeEEeccCCCcHHHHHHH
Confidence 334443 5778777 9999999999999864
No 97
>KOG1454|consensus
Probab=34.17 E-value=47 Score=31.40 Aligned_cols=30 Identities=40% Similarity=0.404 Sum_probs=24.2
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
+.+..++.+.+|..++|||+|-+.|..+|-
T Consensus 118 i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa 147 (326)
T KOG1454|consen 118 IRRFVKEVFVEPVSLVGHSLGGIVALKAAA 147 (326)
T ss_pred HHHHHHhhcCcceEEEEeCcHHHHHHHHHH
Confidence 335667788889999999999999988763
No 98
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=34.15 E-value=1.2e+02 Score=28.84 Aligned_cols=115 Identities=13% Similarity=0.180 Sum_probs=64.3
Q ss_pred CceEEE-cCCCHHHHHHHHHhcCCCce-EEecccCCCcEEEEcchhhHHHHHHHHHh-CCcEEEEccCCCCCccccchHH
Q psy2373 122 GAMAAV-IGINYKKILNILKENNLNTI-DIANYNTLNQIIIAGPKNDINNAQIFFEK-NNAIYIPLNVSGPFHSRYMKPI 198 (358)
Q Consensus 122 g~m~aV-~~~~~~~~~~~l~~~~~~~v-~ia~~nsp~~~visG~~~~l~~l~~~l~~-~g~~~~~L~v~~~fHs~~~~~~ 198 (358)
|.+.++ +..+.++..+.++....... .+ .+.++=.++..+++.+.++. .++...-+++.+. ||..+-..
T Consensus 70 g~~~~iHk~~~~e~~~~fv~~~~~~~~~~~-------~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhG-hs~~~i~~ 141 (346)
T PRK05096 70 DILTAVHKHYSVEEWAAFVNNSSADVLKHV-------MVSTGTSDADFEKTKQILALSPALNFICIDVANG-YSEHFVQF 141 (346)
T ss_pred CCeEEEecCCCHHHHHHHHHhccccccceE-------EEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCC-cHHHHHHH
Confidence 344444 23677776666654321100 11 11233344566666655553 5667777777764 77766666
Q ss_pred HHHHHHHhccCCCCCCCccEEeCCCCcccChhHHHHHHHHhcCCcccHHHHHHHHHhcCCCCcEE-EEECCchHHHH
Q psy2373 199 YKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNLSNHLINPVKWFDSIYYLLNKSKNEMEF-MEIGPGTVLTK 274 (358)
Q Consensus 199 ~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~~~~~~~~~~~~~~pv~f~~~v~~~~~~~~g~~~~-veiGP~~~l~~ 274 (358)
...+++.+ |.++++-. ...+ .+..+.+.+. |.+.+ |-||||+.|++
T Consensus 142 ik~ik~~~-------P~~~vIaG---NV~T------------------~e~a~~Li~a--GAD~vKVGIGpGSiCtT 188 (346)
T PRK05096 142 VAKAREAW-------PDKTICAG---NVVT------------------GEMVEELILS--GADIVKVGIGPGSVCTT 188 (346)
T ss_pred HHHHHHhC-------CCCcEEEe---cccC------------------HHHHHHHHHc--CCCEEEEcccCCccccC
Confidence 66655542 33443322 2222 2455667777 88765 99999999885
No 99
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=33.72 E-value=53 Score=28.31 Aligned_cols=27 Identities=30% Similarity=0.302 Sum_probs=20.9
Q ss_pred HHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 71 DHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 71 ~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+++++.+-+...++|.|+|-+-|.+.|
T Consensus 51 ~~i~~~~~~~~~liGSSlGG~~A~~La 77 (187)
T PF05728_consen 51 QLIEELKPENVVLIGSSLGGFYATYLA 77 (187)
T ss_pred HHHHhCCCCCeEEEEEChHHHHHHHHH
Confidence 455555555579999999999999875
No 100
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=33.29 E-value=51 Score=29.01 Aligned_cols=21 Identities=38% Similarity=0.393 Sum_probs=15.3
Q ss_pred CCCcCEEeecChHHHHHHHHh
Q psy2373 77 GEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.-.+-.+.|||+|--.|..++
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a 146 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLA 146 (229)
T ss_pred CCceEEEEccCHHHHHHHHHH
Confidence 334557899999987777654
No 101
>PRK10985 putative hydrolase; Provisional
Probab=32.83 E-value=51 Score=30.80 Aligned_cols=26 Identities=23% Similarity=0.172 Sum_probs=19.0
Q ss_pred HHHH-HhCCCcCEEeecChHHHHHHHH
Q psy2373 71 DHIK-NTGEYADFLVGHSLGEYNALES 96 (358)
Q Consensus 71 ~~l~-~~Gv~P~~v~GhS~GE~aAa~~ 96 (358)
+.++ ..+..|-.++|||+|-..++..
T Consensus 122 ~~l~~~~~~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 122 RWLQREFGHVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred HHHHHhCCCCCEEEEEecchHHHHHHH
Confidence 4444 4688899999999999754443
No 102
>PRK01060 endonuclease IV; Provisional
Probab=32.61 E-value=2.8e+02 Score=25.08 Aligned_cols=49 Identities=16% Similarity=-0.055 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcCCCceEEecccCCCcEEE-EcchhhHHHHHHHHHhCCcEE
Q psy2373 132 YKKILNILKENNLNTIDIANYNTLNQIII-AGPKNDINNAQIFFEKNNAIY 181 (358)
Q Consensus 132 ~~~~~~~l~~~~~~~v~ia~~nsp~~~vi-sG~~~~l~~l~~~l~~~g~~~ 181 (358)
.++.-+.+++.+.+.++|...| |..+.. .-+++.++++.+.+++.|+..
T Consensus 14 ~~~~l~~~~~~G~d~vEl~~~~-p~~~~~~~~~~~~~~~lk~~~~~~gl~~ 63 (281)
T PRK01060 14 LEGAVAEAAEIGANAFMIFTGN-PQQWKRKPLEELNIEAFKAACEKYGISP 63 (281)
T ss_pred HHHHHHHHHHcCCCEEEEECCC-CCCCcCCCCCHHHHHHHHHHHHHcCCCC
Confidence 4566666667777889887764 333322 235667899999999998863
No 103
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=32.55 E-value=35 Score=28.89 Aligned_cols=18 Identities=44% Similarity=0.488 Sum_probs=15.4
Q ss_pred CcCEEeecChHHHHHHHH
Q psy2373 79 YADFLVGHSLGEYNALES 96 (358)
Q Consensus 79 ~P~~v~GhS~GE~aAa~~ 96 (358)
+|..++|||+|-++++..
T Consensus 55 ~~~ilVaHSLGc~~~l~~ 72 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRW 72 (171)
T ss_dssp TTEEEEEETHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHH
Confidence 567999999999988865
No 104
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=32.51 E-value=55 Score=28.60 Aligned_cols=27 Identities=33% Similarity=0.316 Sum_probs=19.2
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHH
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALES 96 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~ 96 (358)
+.+.+++.|- .|.++|+|.|-..|+..
T Consensus 93 l~~~i~~~GP-fdGvlGFSQGA~lAa~l 119 (212)
T PF03959_consen 93 LRDYIEENGP-FDGVLGFSQGAALAALL 119 (212)
T ss_dssp HHHHHHHH----SEEEEETHHHHHHHHH
T ss_pred HHHHHHhcCC-eEEEEeecHHHHHHHHH
Confidence 4467777774 79999999998877754
No 105
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=32.39 E-value=2.5e+02 Score=23.95 Aligned_cols=17 Identities=35% Similarity=0.255 Sum_probs=14.4
Q ss_pred CEEeecChHHHHHHHHh
Q psy2373 81 DFLVGHSLGEYNALESA 97 (358)
Q Consensus 81 ~~v~GhS~GE~aAa~~a 97 (358)
..++|||.|-..+..++
T Consensus 111 ~tv~GHSYGS~v~G~A~ 127 (177)
T PF06259_consen 111 LTVVGHSYGSTVVGLAA 127 (177)
T ss_pred EEEEEecchhHHHHHHh
Confidence 47999999998888764
No 106
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=31.93 E-value=42 Score=32.15 Aligned_cols=34 Identities=29% Similarity=0.287 Sum_probs=27.7
Q ss_pred CCcCEEeecChHHHHHHHHhCCCCHHHHHHHHHH
Q psy2373 78 EYADFLVGHSLGEYNALESAGVFSFEDGLRLVQK 111 (358)
Q Consensus 78 v~P~~v~GhS~GE~aAa~~aG~ls~~da~~l~~~ 111 (358)
..+..++|||+|-++++..+|+-..-+.+...+.
T Consensus 158 ~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~ 191 (365)
T COG4188 158 PQRVGVLGHSFGGYTAMELAGAELDAEALLQHCE 191 (365)
T ss_pred ccceEEEecccccHHHHHhccccccHHHHHHHhh
Confidence 3567999999999999999999877666665554
No 107
>PHA02857 monoglyceride lipase; Provisional
Probab=31.60 E-value=56 Score=29.32 Aligned_cols=23 Identities=30% Similarity=0.427 Sum_probs=18.9
Q ss_pred HhCCCcCEEeecChHHHHHHHHh
Q psy2373 75 NTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 75 ~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.++.+|-.++|||+|-..|..++
T Consensus 93 ~~~~~~~~lvG~S~GG~ia~~~a 115 (276)
T PHA02857 93 TYPGVPVFLLGHSMGATISILAA 115 (276)
T ss_pred hCCCCCEEEEEcCchHHHHHHHH
Confidence 45567889999999999888765
No 108
>PF09383 NIL: NIL domain; InterPro: IPR018449 This domain is found at the C terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a conserved sequence in some members of the family. ; PDB: 2QRR_A 3CED_A 2QSW_A 3TUZ_D 3TUJ_D 3DHX_B 3TUI_H 3DHW_D.
Probab=31.20 E-value=84 Score=22.32 Aligned_cols=26 Identities=12% Similarity=0.261 Sum_probs=21.4
Q ss_pred EEEEcchhhHHHHHHHHHhCCcEEEE
Q psy2373 158 IIIAGPKNDINNAQIFFEKNNAIYIP 183 (358)
Q Consensus 158 ~visG~~~~l~~l~~~l~~~g~~~~~ 183 (358)
+-+.|+.+.++++.+.|+++++....
T Consensus 50 l~l~g~~~~~~~a~~~L~~~~v~vEv 75 (76)
T PF09383_consen 50 LELPGDDEEIEKAIAYLREQGVEVEV 75 (76)
T ss_dssp EEEES-HHHHHHHHHHHHHTTEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHCCCeEEE
Confidence 45679999999999999999987654
No 109
>KOG2564|consensus
Probab=30.31 E-value=44 Score=30.96 Aligned_cols=31 Identities=26% Similarity=0.239 Sum_probs=20.3
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
++...|=-.-+.|-+++|||||--.|++.+-
T Consensus 135 ~~i~~~fge~~~~iilVGHSmGGaIav~~a~ 165 (343)
T KOG2564|consen 135 AVIKELFGELPPQIILVGHSMGGAIAVHTAA 165 (343)
T ss_pred HHHHHHhccCCCceEEEeccccchhhhhhhh
Confidence 4444332233566789999999888877653
No 110
>cd02394 vigilin_like_KH K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has been shown to bind RNA and to associate with both soluble and membrane-bound polyribosomes as a mRNP component. Bicaudal-C is a RNA-binding molecule believed to function in embryonic development at the post-transcriptional level. In general, KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA.
Probab=29.93 E-value=1.1e+02 Score=20.54 Aligned_cols=42 Identities=24% Similarity=0.372 Sum_probs=24.8
Q ss_pred HHHHHHHHHhcCCCceEEecc-cCCCcEEEEcchhhHHHHHHHH
Q psy2373 132 YKKILNILKENNLNTIDIANY-NTLNQIIIAGPKNDINNAQIFF 174 (358)
Q Consensus 132 ~~~~~~~l~~~~~~~v~ia~~-nsp~~~visG~~~~l~~l~~~l 174 (358)
-..++++.++.+ -.+.+.-. +..+.++|+|+.+.+....+.+
T Consensus 19 G~~i~~i~~~~g-~~I~i~~~~~~~~~v~I~G~~~~v~~A~~~i 61 (62)
T cd02394 19 GSNIRKIMEETG-VKIRFPDPGSKSDTITITGPKENVEKAKEEI 61 (62)
T ss_pred CCcHHHHHHHhC-CEEEcCCCCCCCCEEEEEcCHHHHHHHHHHh
Confidence 344455555443 22333322 2357799999999988877654
No 111
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=29.90 E-value=64 Score=30.00 Aligned_cols=30 Identities=27% Similarity=0.367 Sum_probs=20.2
Q ss_pred HHHHHHHHh---CCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNT---GEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~---Gv~P~~v~GhS~GE~aAa~~a 97 (358)
++.+.++.. .-.|-.++|||+|-..|+.++
T Consensus 120 ~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a 152 (330)
T PLN02298 120 SFFNSVKQREEFQGLPRFLYGESMGGAICLLIH 152 (330)
T ss_pred HHHHHHHhcccCCCCCEEEEEecchhHHHHHHH
Confidence 444555432 124679999999998887654
No 112
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=29.74 E-value=35 Score=30.74 Aligned_cols=18 Identities=39% Similarity=0.434 Sum_probs=14.5
Q ss_pred CcCEEeecChHHHHHHHH
Q psy2373 79 YADFLVGHSLGEYNALES 96 (358)
Q Consensus 79 ~P~~v~GhS~GE~aAa~~ 96 (358)
+|-+++|||||-+.|.-+
T Consensus 74 ~P~alfGHSmGa~lAfEv 91 (244)
T COG3208 74 APFALFGHSMGAMLAFEV 91 (244)
T ss_pred CCeeecccchhHHHHHHH
Confidence 678999999998776543
No 113
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=29.22 E-value=2e+02 Score=27.39 Aligned_cols=37 Identities=19% Similarity=0.277 Sum_probs=29.3
Q ss_pred CcCEEeecChHHHHHHHHhC-------CCCHHHHHHHHHHHHHH
Q psy2373 79 YADFLVGHSLGEYNALESAG-------VFSFEDGLRLVQKRSKL 115 (358)
Q Consensus 79 ~P~~v~GhS~GE~aAa~~aG-------~ls~~da~~l~~~r~~~ 115 (358)
.+|.++|-|.|-+.|+..+. .++.+|.+++-..++.-
T Consensus 43 ~FDliaGTStGgiiA~~la~~~~~~~p~~~~~e~~~~y~~~~~~ 86 (349)
T cd07214 43 YFDVIAGTSTGGLITAMLTAPNENKRPLFAAKDIVQFYLENGPK 86 (349)
T ss_pred hCCEEeeCCHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhHH
Confidence 47999999999988888764 37888988877666553
No 114
>PLN02872 triacylglycerol lipase
Probab=29.20 E-value=96 Score=30.19 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=22.2
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
++.+.+.+...++-.++|||+|-+.+++++
T Consensus 149 a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~ 178 (395)
T PLN02872 149 EMIHYVYSITNSKIFIVGHSQGTIMSLAAL 178 (395)
T ss_pred HHHHHHHhccCCceEEEEECHHHHHHHHHh
Confidence 455655544457889999999999888655
No 115
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=28.69 E-value=63 Score=30.80 Aligned_cols=30 Identities=30% Similarity=0.387 Sum_probs=22.8
Q ss_pred HHHHHHHHH--hCCCcC--EEeecChHHHHHHHH
Q psy2373 67 LSYRDHIKN--TGEYAD--FLVGHSLGEYNALES 96 (358)
Q Consensus 67 ~a~~~~l~~--~Gv~P~--~v~GhS~GE~aAa~~ 96 (358)
-+.+++|++ .|++|. .+.|||+|-..++.+
T Consensus 199 ~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~A 232 (365)
T PF05677_consen 199 QACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEA 232 (365)
T ss_pred HHHHHHHHhcccCCChheEEEeeccccHHHHHHH
Confidence 477889985 788886 455999998776654
No 116
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=28.36 E-value=52 Score=31.05 Aligned_cols=19 Identities=37% Similarity=0.560 Sum_probs=15.8
Q ss_pred CcCEEeecChHHHHHHHHh
Q psy2373 79 YADFLVGHSLGEYNALESA 97 (358)
Q Consensus 79 ~P~~v~GhS~GE~aAa~~a 97 (358)
.|-.++|||+|-..|+.++
T Consensus 162 ~~~~LvGhSmGG~val~~a 180 (349)
T PLN02385 162 LPSFLFGQSMGGAVALKVH 180 (349)
T ss_pred CCEEEEEeccchHHHHHHH
Confidence 4679999999998887664
No 117
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=28.23 E-value=69 Score=30.25 Aligned_cols=26 Identities=19% Similarity=0.003 Sum_probs=20.8
Q ss_pred HHHHhCCCcCEEeecChHHHHHHHHh
Q psy2373 72 HIKNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 72 ~l~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+.+..|.++-.++|||+|-..++.++
T Consensus 129 l~~~~~~~~i~lvGhS~GG~i~~~~~ 154 (350)
T TIGR01836 129 ICRTSKLDQISLLGICQGGTFSLCYA 154 (350)
T ss_pred HHHHhCCCcccEEEECHHHHHHHHHH
Confidence 34567889999999999998877654
No 118
>PF05798 Phage_FRD3: Bacteriophage FRD3 protein; InterPro: IPR008765 This is a group of proteins of unknown function from bacteriophage T2 and related phage.
Probab=27.81 E-value=1.4e+02 Score=20.95 Aligned_cols=43 Identities=16% Similarity=0.383 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHhcCCCceEEecc-cCC---CcEEEEcchhhHHHHHHH
Q psy2373 130 INYKKILNILKENNLNTIDIANY-NTL---NQIIIAGPKNDINNAQIF 173 (358)
Q Consensus 130 ~~~~~~~~~l~~~~~~~v~ia~~-nsp---~~~visG~~~~l~~l~~~ 173 (358)
.+.+-++++++... +.+.|..+ |++ .+++|.||.+++.+|...
T Consensus 9 VDfEY~eEvIRNRy-Pelsi~si~d~~f~~~~i~i~GPle~l~~FM~n 55 (75)
T PF05798_consen 9 VDFEYTEEVIRNRY-PELSITSIQDSKFCSIQIVIEGPLEDLTRFMAN 55 (75)
T ss_pred eehHhHHHHHHccC-CceEEEEeecCCcceEEEEEeccHHHHHHHHHH
Confidence 34566777777654 66665544 444 357899999999998754
No 119
>PRK10566 esterase; Provisional
Probab=27.33 E-value=70 Score=28.16 Aligned_cols=28 Identities=29% Similarity=0.284 Sum_probs=20.0
Q ss_pred HHHHHHhC-C--CcCEEeecChHHHHHHHHh
Q psy2373 70 RDHIKNTG-E--YADFLVGHSLGEYNALESA 97 (358)
Q Consensus 70 ~~~l~~~G-v--~P~~v~GhS~GE~aAa~~a 97 (358)
.+.++..+ + +.-+++|||+|-+.|+.++
T Consensus 95 ~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~ 125 (249)
T PRK10566 95 RAAIREEGWLLDDRLAVGGASMGGMTALGIM 125 (249)
T ss_pred HHHHHhcCCcCccceeEEeecccHHHHHHHH
Confidence 34455554 4 3468999999999998765
No 120
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=26.62 E-value=87 Score=25.49 Aligned_cols=21 Identities=33% Similarity=0.360 Sum_probs=15.4
Q ss_pred CCCcCEEeecChHHHHHHHHh
Q psy2373 77 GEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.-..-.+.|||+|--.|..++
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a 46 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAG 46 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHH
Confidence 444557999999987776654
No 121
>PF09968 DUF2202: Uncharacterized protein domain (DUF2202); InterPro: IPR019243 This domain, found in various hypothetical archaeal proteins, has no known function.; PDB: 3Q4O_A 3Q4Q_A 3Q4R_A 3Q4N_A.
Probab=26.61 E-value=19 Score=30.34 Aligned_cols=95 Identities=18% Similarity=0.289 Sum_probs=46.5
Q ss_pred HHHHHHHHhCCCcCEEeecChHHHH---------HHHHhCCCCHHHHHHHHHHHHHHHhcCCCCceEEEcCCCHHHHHHH
Q psy2373 68 SYRDHIKNTGEYADFLVGHSLGEYN---------ALESAGVFSFEDGLRLVQKRSKLMSQVLDGAMAAVIGINYKKILNI 138 (358)
Q Consensus 68 a~~~~l~~~Gv~P~~v~GhS~GE~a---------Aa~~aG~ls~~da~~l~~~r~~~~~~~~~g~m~aV~~~~~~~~~~~ 138 (358)
++..++...|+. +=+.|.+.|+++ .++..|..|..||+++...-- ..+..++++.
T Consensus 44 av~~Ll~kY~l~-dP~~~~~~G~f~~~~lq~LY~~Lv~~G~~S~~dAl~vga~iE---------------e~dI~DL~~~ 107 (162)
T PF09968_consen 44 AVKALLEKYGLE-DPVEGDPVGVFTNPELQELYNQLVEQGSKSLEDALKVGALIE---------------ELDIADLEEA 107 (162)
T ss_dssp HHHHHHHHTT----S-SS-STT--SSHHHHHHHHHHHHHHTS-HHHHHHHHHHHH---------------HHHHHHHHHH
T ss_pred HHHHHHHHhCCC-CCCccCCCCCcCcHHHHHHHHHHHHHhhhcHHHHHHHhHHHH---------------HhhHHHHHHH
Confidence 455667788873 334466667654 677889999999999765322 1222333333
Q ss_pred HHhcCCCceEEecccCCCcEEEEcchhhHHHHHHHHHhCCcEEEE
Q psy2373 139 LKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAIYIP 183 (358)
Q Consensus 139 l~~~~~~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g~~~~~ 183 (358)
++....+++.... +-...|+...+.+|...+...|+...+
T Consensus 108 l~~t~~~Di~~Vy-----~nL~~gS~NHLrAF~r~L~~~g~~Y~p 147 (162)
T PF09968_consen 108 LARTDNEDIKTVY-----ENLRRGSRNHLRAFVRQLERYGVTYTP 147 (162)
T ss_dssp HTT---HHHHHHH-----HHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred HhcCCcHHHHHHH-----HHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 3221100000000 012347778889999999988876444
No 122
>PF01709 Transcrip_reg: Transcriptional regulator; InterPro: IPR002876 This entry represents the core region of several hypothetical proteins found in bacteria, plants, and yeast proteins. This core region can be subdivided into three domains: a 3-helical bundle domain, and two alpha+beta domains with different folds, where domain 3 (ferredoxin-like fold) is inserted within domain 2. This core region is found in the following hypothetical proteins: YebC from Escherichia coli, HP0162 from Helicobacter pylori (Campylobacter pylori) and aq1575 from Aquifex aeolicus []. The crystal structure of a conserved hypothetical protein, Aq1575, from Aquifex aeolicus has been determined. A structural homology search reveals that this protein has a new fold with no obvious similarity to those of other proteins of known three-dimensional structure. The protein reveals a monomer consisting of three domains arranged along a pseudo threefold symmetry axis. There is a large cleft with approximate dimensions of 10 A x 10 A x 20 A in the centre of the three domains along the symmetry axis. Two possible active sites are suggested based on the structure and multiple sequence alignment. There are several highly conserved residues in these putative active sites [].; PDB: 1LFP_A 1MW7_A 1KON_A.
Probab=26.03 E-value=1.2e+02 Score=27.21 Aligned_cols=90 Identities=8% Similarity=0.020 Sum_probs=53.0
Q ss_pred CCCHHHHHHHHHhcCCCceEEecccCCCcEEEEcchhhHHHHHHHHHhCCcEEEEccCCCCCc--cccchHHHHHHHHHh
Q psy2373 129 GINYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAIYIPLNVSGPFH--SRYMKPIYKKFNNFL 206 (358)
Q Consensus 129 ~~~~~~~~~~l~~~~~~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g~~~~~L~v~~~fH--s~~~~~~~~~~~~~l 206 (358)
..+.+++.+..-+.+..++. +..+.+.|..++..+.++...|.+.|+......+.+--+ ...-++..+.+..++
T Consensus 142 ~~~~d~~~e~aIe~GaeDve----~~d~~~~~~c~p~~~~~v~~~L~~~g~~i~~~e~~~~P~~~v~l~~e~~~~~~~li 217 (234)
T PF01709_consen 142 DLDEDELMEDAIEAGAEDVE----EDDGEFEFICDPSDLSAVKKALEKKGYEIESAELEYIPNNPVELSEEDAEKVEKLI 217 (234)
T ss_dssp CS-HHHHHHHHHHHTESEEE----ECTSEEEEEEEGGGHHHHHHHHHHTT---SEEEEEEEESS-EE--HHHHHHHHHHH
T ss_pred CCChHHHHHHHHhCCCcEee----ecCCeEEEEECHHHHHHHHHHHHHcCCCeeEEEEEEeCCCCcccCHHHHHHHHHHH
Confidence 45666666655555556665 346779999999999999999999988633222211111 222345666666666
Q ss_pred ccCCCCCCCccEEeCC
Q psy2373 207 LDFVFHSPNIPVISNF 222 (358)
Q Consensus 207 ~~~~~~~p~ip~~S~~ 222 (358)
..+.-.+-...+|+|+
T Consensus 218 e~Lee~dDV~~Vy~Ni 233 (234)
T PF01709_consen 218 EALEELDDVQNVYHNI 233 (234)
T ss_dssp HHHHTSTTEEEEEESE
T ss_pred HHHhCCcCcceeeeCC
Confidence 6655444555566664
No 123
>KOG4409|consensus
Probab=25.61 E-value=74 Score=30.37 Aligned_cols=28 Identities=36% Similarity=0.465 Sum_probs=22.1
Q ss_pred HHHHH-HhCCCcCEEeecChHHHHHHHHh
Q psy2373 70 RDHIK-NTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 70 ~~~l~-~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
.+.|| ..|+.==.++|||+|-|-|+..|
T Consensus 150 iE~WR~~~~L~KmilvGHSfGGYLaa~YA 178 (365)
T KOG4409|consen 150 IEQWRKKMGLEKMILVGHSFGGYLAAKYA 178 (365)
T ss_pred HHHHHHHcCCcceeEeeccchHHHHHHHH
Confidence 35555 68888888999999998887654
No 124
>COG1647 Esterase/lipase [General function prediction only]
Probab=25.51 E-value=1.2e+02 Score=27.15 Aligned_cols=35 Identities=26% Similarity=0.177 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhCCCC
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAGVFS 101 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG~ls 101 (358)
..-++.|.+.|-.--+++|.|||-+-|+-.|-.++
T Consensus 73 ~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p 107 (243)
T COG1647 73 EDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP 107 (243)
T ss_pred HHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC
Confidence 34558888999999999999999888877664443
No 125
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=25.47 E-value=75 Score=30.32 Aligned_cols=28 Identities=39% Similarity=0.439 Sum_probs=21.3
Q ss_pred HHHHHH--HhCCCcCEEeecChHHHHHHHH
Q psy2373 69 YRDHIK--NTGEYADFLVGHSLGEYNALES 96 (358)
Q Consensus 69 ~~~~l~--~~Gv~P~~v~GhS~GE~aAa~~ 96 (358)
+++.|. ..|.+|-.++|||+|--....|
T Consensus 208 LA~~L~~~~~G~RpVtLvG~SLGarvI~~c 237 (345)
T PF05277_consen 208 LADALLSRNQGERPVTLVGHSLGARVIYYC 237 (345)
T ss_pred HHHHHHHhcCCCCceEEEeecccHHHHHHH
Confidence 345453 4699999999999998776665
No 126
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=25.45 E-value=1e+02 Score=27.43 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=20.4
Q ss_pred HHHHHHHHHhCCCcCEEeecChHHHHHHHHhC
Q psy2373 67 LSYRDHIKNTGEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 67 ~a~~~~l~~~Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
+.+.+.+...--.+-.+.|||.|-.-|.+++-
T Consensus 72 ~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~ 103 (224)
T PF11187_consen 72 LAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAA 103 (224)
T ss_pred HHHHHHHHHhCCCCEEEEEechhhHHHHHHHH
Confidence 34444433322235788899999988888763
No 127
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=24.91 E-value=48 Score=30.26 Aligned_cols=20 Identities=45% Similarity=0.669 Sum_probs=15.6
Q ss_pred CCCcCEEeecChHHHHHHHH
Q psy2373 77 GEYADFLVGHSLGEYNALES 96 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~ 96 (358)
.-.+-.++|||+|.|.++-+
T Consensus 82 ~~~~liLiGHSIGayi~lev 101 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEV 101 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHH
Confidence 33556889999999998854
No 128
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=24.78 E-value=4.1e+02 Score=23.13 Aligned_cols=21 Identities=33% Similarity=0.309 Sum_probs=16.4
Q ss_pred CCcCEEeecChHHHHHHHHhC
Q psy2373 78 EYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 78 v~P~~v~GhS~GE~aAa~~aG 98 (358)
+.|-.++|||+|=+.+-++-+
T Consensus 77 ~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred cccceEEEecccHHHHHHHHH
Confidence 357789999999888777643
No 129
>PRK05855 short chain dehydrogenase; Validated
Probab=24.62 E-value=1e+02 Score=30.99 Aligned_cols=31 Identities=16% Similarity=0.240 Sum_probs=21.9
Q ss_pred HHHHHHHhCC-CcCEEeecChHHHHHHHHhCC
Q psy2373 69 YRDHIKNTGE-YADFLVGHSLGEYNALESAGV 99 (358)
Q Consensus 69 ~~~~l~~~Gv-~P~~v~GhS~GE~aAa~~aG~ 99 (358)
+.+.++..+. +|-.++|||+|-+.+..++..
T Consensus 83 l~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 83 FAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred HHHHHHHhCCCCcEEEEecChHHHHHHHHHhC
Confidence 3455566675 468999999999887655533
No 130
>PRK01415 hypothetical protein; Validated
Probab=23.39 E-value=1.7e+02 Score=26.54 Aligned_cols=42 Identities=26% Similarity=0.105 Sum_probs=30.7
Q ss_pred HHHHHHHhcCC-CceEEecccCCCcEEEEcchhhHHHHHHHHHhC
Q psy2373 134 KILNILKENNL-NTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177 (358)
Q Consensus 134 ~~~~~l~~~~~-~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~ 177 (358)
++.+.+...+. ++|+||-. --+.+|||+.++++++.+.+++.
T Consensus 25 ~l~~~~~~~~~~G~i~la~E--GIN~tisg~~~~~~~~~~~l~~~ 67 (247)
T PRK01415 25 KLLLIGKRKYVRGTILLANE--GFNGSFSGSYENVNLVLEELIKL 67 (247)
T ss_pred HHHHHHHHcCCeeEEEEccC--ccceEeeCCHHHHHHHHHHHHhC
Confidence 34445555554 68888764 23579999999999999999873
No 131
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=23.39 E-value=68 Score=25.18 Aligned_cols=22 Identities=32% Similarity=0.332 Sum_probs=18.2
Q ss_pred CCCcCEEeecChHHHHHHHHhC
Q psy2373 77 GEYADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 77 Gv~P~~v~GhS~GE~aAa~~aG 98 (358)
...+-.++|||+|-..++.++.
T Consensus 59 ~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 59 DPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp TCCEEEEEEETHHHHHHHHHHH
T ss_pred CCCcEEEEEEccCcHHHHHHhh
Confidence 5677899999999998887654
No 132
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=22.69 E-value=2.6e+02 Score=26.69 Aligned_cols=81 Identities=20% Similarity=0.245 Sum_probs=46.7
Q ss_pred chhhHHHHHHHHHhC-CcEEEEccCCCCCccccchHHHHHHHHHhccCCCCCCCccEEeCCCCcccChhHHHHHHHHhcC
Q psy2373 163 PKNDINNAQIFFEKN-NAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHSPNIPVISNFEALPYSIEKITNNLSNHLI 241 (358)
Q Consensus 163 ~~~~l~~l~~~l~~~-g~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~p~ip~~S~~~g~~~~~~~~~~~~~~~~~ 241 (358)
.++..+++.+.++.. ++...-+++.+. ||..+-...+.+++.+ |..+++-. ...+.
T Consensus 105 ~~~d~er~~~L~~a~~~~d~iviD~AhG-hs~~~i~~ik~ir~~~-------p~~~viaG---NV~T~------------ 161 (343)
T TIGR01305 105 SDNDLEKMTSILEAVPQLKFICLDVANG-YSEHFVEFVKLVREAF-------PEHTIMAG---NVVTG------------ 161 (343)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEECCCC-cHHHHHHHHHHHHhhC-------CCCeEEEe---cccCH------------
Confidence 445566665555543 456666776664 7766666555555432 33334332 22222
Q ss_pred CcccHHHHHHHHHhcCCCCc-EEEEECCchHHHH
Q psy2373 242 NPVKWFDSIYYLLNKSKNEM-EFMEIGPGTVLTK 274 (358)
Q Consensus 242 ~pv~f~~~v~~~~~~~~g~~-~~veiGP~~~l~~ 274 (358)
+..+.+.+. |.+ +.|-||||+.+++
T Consensus 162 ------e~a~~Li~a--GAD~ikVgiGpGSictt 187 (343)
T TIGR01305 162 ------EMVEELILS--GADIVKVGIGPGSVCTT 187 (343)
T ss_pred ------HHHHHHHHc--CCCEEEEcccCCCcccC
Confidence 334556666 877 4699999998774
No 133
>PRK00110 hypothetical protein; Validated
Probab=22.44 E-value=5.8e+02 Score=23.05 Aligned_cols=89 Identities=10% Similarity=0.042 Sum_probs=56.4
Q ss_pred CHHHHHHHHHhcCCCceEEecccCCCcEEEEcchhhHHHHHHHHHhCCcEEEEccCCC-CCc-cccchHHHHHHHHHhcc
Q psy2373 131 NYKKILNILKENNLNTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNNAIYIPLNVSG-PFH-SRYMKPIYKKFNNFLLD 208 (358)
Q Consensus 131 ~~~~~~~~l~~~~~~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g~~~~~L~v~~-~fH-s~~~~~~~~~~~~~l~~ 208 (358)
+.+++.+..-+.+..++.. ....+.|-.+++.+..+.+.|++.|+....-.+.+ |-. ...-.+..+.+.+++..
T Consensus 146 ~~d~~~e~aieaGaeDv~~----e~~~~~i~~~p~~~~~v~~~L~~~g~~~~~sei~~~P~~~v~l~~e~~~~~~~li~~ 221 (245)
T PRK00110 146 DEDELMEAALEAGAEDVET----DDESFEVITAPEDFEAVRDALEAAGLEAESAEVTMIPQNTVELDEETAEKLLKLIDA 221 (245)
T ss_pred CHHHHHHHHHhCCCCEeec----cCCeEEEEECHHHHHHHHHHHHHcCCCeeeeEEEEecCCCcccCHHHHHHHHHHHHH
Confidence 3566665554555455543 33568999999999999999999887532211111 111 12234556677777777
Q ss_pred CCCCCCCccEEeCCC
Q psy2373 209 FVFHSPNIPVISNFE 223 (358)
Q Consensus 209 ~~~~~p~ip~~S~~~ 223 (358)
+.-..-..-+|+|++
T Consensus 222 Led~dDVq~Vy~N~~ 236 (245)
T PRK00110 222 LEDLDDVQNVYHNAE 236 (245)
T ss_pred HhcCCCcceEeECCC
Confidence 776666677899874
No 134
>PLN02442 S-formylglutathione hydrolase
Probab=21.86 E-value=1e+02 Score=28.30 Aligned_cols=24 Identities=25% Similarity=0.295 Sum_probs=18.3
Q ss_pred HHhCCCcCEEeecChHHHHHHHHh
Q psy2373 74 KNTGEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 74 ~~~Gv~P~~v~GhS~GE~aAa~~a 97 (358)
+..+.+..+++|||+|-+.|+.++
T Consensus 138 ~~~~~~~~~i~G~S~GG~~a~~~a 161 (283)
T PLN02442 138 DQLDTSRASIFGHSMGGHGALTIY 161 (283)
T ss_pred HhcCCCceEEEEEChhHHHHHHHH
Confidence 344556678999999999887654
No 135
>PRK11460 putative hydrolase; Provisional
Probab=21.83 E-value=1.2e+02 Score=26.80 Aligned_cols=24 Identities=38% Similarity=0.468 Sum_probs=18.0
Q ss_pred HHhCCCc--CEEeecChHHHHHHHHh
Q psy2373 74 KNTGEYA--DFLVGHSLGEYNALESA 97 (358)
Q Consensus 74 ~~~Gv~P--~~v~GhS~GE~aAa~~a 97 (358)
.+.++.+ ..++|||+|-..|+.++
T Consensus 96 ~~~~~~~~~i~l~GfS~Gg~~al~~a 121 (232)
T PRK11460 96 QQSGVGASATALIGFSQGAIMALEAV 121 (232)
T ss_pred HhcCCChhhEEEEEECHHHHHHHHHH
Confidence 3567765 48999999998887653
No 136
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=21.75 E-value=1.1e+02 Score=29.54 Aligned_cols=28 Identities=11% Similarity=-0.102 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCcCEEeecChHHHHHHHH
Q psy2373 69 YRDHIKNTGEYADFLVGHSLGEYNALES 96 (358)
Q Consensus 69 ~~~~l~~~Gv~P~~v~GhS~GE~aAa~~ 96 (358)
+.+++...++++..++|||+|-..|...
T Consensus 187 l~~~i~~l~~~~~~LvG~s~GG~ia~~~ 214 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGYFSPPVVKY 214 (383)
T ss_pred HHHHHHHhCCCCceEEEECHHHHHHHHH
Confidence 4466778899999999999996555443
No 137
>PRK05320 rhodanese superfamily protein; Provisional
Probab=21.28 E-value=4.4e+02 Score=23.92 Aligned_cols=42 Identities=19% Similarity=0.234 Sum_probs=30.7
Q ss_pred HHHHHHHhcCC-CceEEecccCCCcEEEEcchhhHHHHHHHHHhC
Q psy2373 134 KILNILKENNL-NTIDIANYNTLNQIIIAGPKNDINNAQIFFEKN 177 (358)
Q Consensus 134 ~~~~~l~~~~~-~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~ 177 (358)
.+.+.+.+.+. ++|+||-. --+.+|||+.+.++.+...++..
T Consensus 23 ~~~~~~~~~~~~G~i~ia~e--GiN~t~~g~~~~id~~~~~l~~~ 65 (257)
T PRK05320 23 LVLARCEALGLKGTILLAPE--GINLFLAGTREAIDAFYAWLRAD 65 (257)
T ss_pred HHHHHHHHCCCeEEEEEcCC--CceEEEEeeHHHHHHHHHHHhhC
Confidence 34445555554 78888764 23578999999999999999874
No 138
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=21.20 E-value=1.5e+02 Score=25.07 Aligned_cols=55 Identities=11% Similarity=0.176 Sum_probs=39.5
Q ss_pred HHHhCCcEEEEccCCCCCccccchHHHHHHHHHhccCCCCC--CCccEEeCCCCccc
Q psy2373 173 FFEKNNAIYIPLNVSGPFHSRYMKPIYKKFNNFLLDFVFHS--PNIPVISNFEALPY 227 (358)
Q Consensus 173 ~l~~~g~~~~~L~v~~~fHs~~~~~~~~~~~~~l~~~~~~~--p~ip~~S~~~g~~~ 227 (358)
.+++.|++..-++.+..+=.|+-..+.+++.+.+..+.-.- .++=++||..|..-
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~ 91 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSD 91 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCccc
Confidence 47889999888888887766666666666666666655333 36889999988543
No 139
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=21.17 E-value=2.7e+02 Score=25.99 Aligned_cols=52 Identities=13% Similarity=0.160 Sum_probs=34.4
Q ss_pred HHHHHHhcCC-CceEEecccCCCcEEEEcchhhHHHHHHHHHhCC-cEEEEccCCC
Q psy2373 135 ILNILKENNL-NTIDIANYNTLNQIIIAGPKNDINNAQIFFEKNN-AIYIPLNVSG 188 (358)
Q Consensus 135 ~~~~l~~~~~-~~v~ia~~nsp~~~visG~~~~l~~l~~~l~~~g-~~~~~L~v~~ 188 (358)
+.+++...+. ++|.||.. --+-+|||+.++++++.+.+.+.. ..-..++.+.
T Consensus 26 l~~~~~~~~vkGrillA~E--GINgtvsG~~e~~~~~~~~l~a~~~f~~l~~K~s~ 79 (308)
T COG1054 26 LLALCKALGVKGRILLAHE--GINGTVSGSAEAIEAYMAWLRADPGFADLRFKISE 79 (308)
T ss_pred HHHHHHHcCceeEEEEccC--CcceeEecCHHHHHHHHHHHHhCcccccceeeecc
Confidence 3344444444 67888753 334699999999999999998773 3333444444
No 140
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=21.00 E-value=1.1e+02 Score=27.74 Aligned_cols=28 Identities=25% Similarity=0.134 Sum_probs=20.1
Q ss_pred HHHHH-hCC--CcCEEeecChHHHHHHHHhC
Q psy2373 71 DHIKN-TGE--YADFLVGHSLGEYNALESAG 98 (358)
Q Consensus 71 ~~l~~-~Gv--~P~~v~GhS~GE~aAa~~aG 98 (358)
.++++ +++ +.-.++|||+|-+.|+.++.
T Consensus 127 ~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~ 157 (275)
T TIGR02821 127 ALVAAQFPLDGERQGITGHSMGGHGALVIAL 157 (275)
T ss_pred HHHHhhCCCCCCceEEEEEChhHHHHHHHHH
Confidence 34444 444 45789999999999887753
No 141
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=20.88 E-value=1.1e+02 Score=30.06 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=21.9
Q ss_pred HHHHHHHHh---CCCcCEEeecChHHHHHHHHh
Q psy2373 68 SYRDHIKNT---GEYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 68 a~~~~l~~~---Gv~P~~v~GhS~GE~aAa~~a 97 (358)
++.+.+... ..+.-+++|||+|-+.|+.+|
T Consensus 251 avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A 283 (414)
T PRK05077 251 AVLNALPNVPWVDHTRVAAFGFRFGANVAVRLA 283 (414)
T ss_pred HHHHHHHhCcccCcccEEEEEEChHHHHHHHHH
Confidence 455666654 345668999999999988764
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=20.82 E-value=1.6e+02 Score=27.89 Aligned_cols=28 Identities=32% Similarity=0.344 Sum_probs=18.8
Q ss_pred HHHHH-HhCCCcC--EEeecChHHHHHHHHh
Q psy2373 70 RDHIK-NTGEYAD--FLVGHSLGEYNALESA 97 (358)
Q Consensus 70 ~~~l~-~~Gv~P~--~v~GhS~GE~aAa~~a 97 (358)
.+.|. ..|+.++ .++|||+|.-.|.+++
T Consensus 138 l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG 168 (331)
T PF00151_consen 138 LSFLINNFGVPPENIHLIGHSLGAHVAGFAG 168 (331)
T ss_dssp HHHHHHHH---GGGEEEEEETCHHHHHHHHH
T ss_pred HHHHHhhcCCChhHEEEEeeccchhhhhhhh
Confidence 34444 6788774 7899999998888775
No 143
>PRK04940 hypothetical protein; Provisional
Probab=20.53 E-value=2.4e+02 Score=24.20 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=17.2
Q ss_pred CCcCEEeecChHHHHHHHHh
Q psy2373 78 EYADFLVGHSLGEYNALESA 97 (358)
Q Consensus 78 v~P~~v~GhS~GE~aAa~~a 97 (358)
.+|..++|.|+|-+=|.+.|
T Consensus 59 ~~~~~liGSSLGGyyA~~La 78 (180)
T PRK04940 59 DERPLICGVGLGGYWAERIG 78 (180)
T ss_pred CCCcEEEEeChHHHHHHHHH
Confidence 36899999999999888765
Done!